Your job contains 1 sequence.
>psy14509
MSPGCTTTIGVNTQLFLLFPVMTESDVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEY
HPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATEEKKRQKRGGKGIVKARKKEEVPKQ
RGGKGIVKARKKEEVPKQVCVSRAPRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGS
SVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKSPTYNIGKLCFTYTYYYFM
GSA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14509
(243 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NE92 - symbol:DENR "Density-regulated protein... 498 1.2e-47 1
UNIPROTKB|Q5ZJ39 - symbol:DENR "Density-regulated protein... 498 1.2e-47 1
UNIPROTKB|O43583 - symbol:DENR "Density-regulated protein... 492 5.4e-47 1
MGI|MGI:1915434 - symbol:Denr "density-regulated protein"... 492 5.4e-47 1
RGD|1584200 - symbol:Denr "density-regulated protein" spe... 489 1.1e-46 1
UNIPROTKB|Q2HJ47 - symbol:DENR "Density-regulated protein... 487 1.8e-46 1
UNIPROTKB|J9NSD0 - symbol:DENR "Uncharacterized protein" ... 487 1.8e-46 1
ZFIN|ZDB-GENE-040718-450 - symbol:denr "density-regulated... 486 2.3e-46 1
UNIPROTKB|F1REW9 - symbol:DENR "Uncharacterized protein" ... 483 4.8e-46 1
UNIPROTKB|E1BZC2 - symbol:DENR "Density-regulated protein... 480 1.0e-45 1
UNIPROTKB|E1BIK7 - symbol:E1BIK7 "Uncharacterized protein... 476 2.7e-45 1
FB|FBgn0030802 - symbol:CG9099 species:7227 "Drosophila m... 461 1.0e-43 1
WB|WBGene00012932 - symbol:Y47D3A.21 species:6239 "Caenor... 446 4.0e-42 1
UNIPROTKB|F8VVL1 - symbol:DENR "Density-regulated protein... 330 7.9e-30 1
UNIPROTKB|A4QVI3 - symbol:TMA22 "Translation machinery-as... 298 1.9e-26 1
TAIR|locus:2143079 - symbol:AT5G11900 species:3702 "Arabi... 295 4.0e-26 1
POMBASE|SPBC16C6.05 - symbol:SPBC16C6.05 "mitochondrial t... 290 1.4e-25 1
ASPGD|ASPL0000050181 - symbol:AN8883 species:162425 "Emer... 238 4.4e-20 1
SGD|S000003775 - symbol:TMA22 "Protein of unknown functio... 237 5.7e-20 1
DICTYBASE|DDB_G0279677 - symbol:denr "density-regulated p... 160 3.9e-19 2
CGD|CAL0005783 - symbol:orf19.4164 species:5476 "Candida ... 120 1.1e-12 2
UNIPROTKB|Q9KM19 - symbol:VC_A0570 "Sui1 family protein" ... 104 1.9e-05 1
TIGR_CMR|VC_A0570 - symbol:VC_A0570 "Sui1 family protein"... 104 1.9e-05 1
>UNIPROTKB|F1NE92 [details] [associations]
symbol:DENR "Density-regulated protein" species:9031
"Gallus gallus" [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR001950 Pfam:PF01253
PROSITE:PS50296 GO:GO:0003743 GeneTree:ENSGT00390000014349
InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159
IPI:IPI00580832 EMBL:AADN02034896 Ensembl:ENSGALT00000006020
Uniprot:F1NE92
Length = 201
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 98/197 (49%), Positives = 133/197 (67%)
Query: 26 DVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKL 85
D + + +G + +YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P+EF KL +
Sbjct: 15 DCRGDIRSGARSDADYPLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLT-V 73
Query: 86 SGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQ-RGGKGIVKARKKEEVPKQVCVSRA 144
E E A ++EE KQ RGG+G +K +KK+ VP++V +++
Sbjct: 74 ENSPKQEAGVGEGQGT---------AGEEEEKKKQKRGGRGQIK-QKKKTVPQKVTIAKI 123
Query: 145 PRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPE 204
PR KKK VT V GL++F+IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI E
Sbjct: 124 PRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQE 183
Query: 205 KWPEIDEDFIEDLGDLK 221
KWPE+D+D IEDLG++K
Sbjct: 184 KWPEVDDDSIEDLGEVK 200
>UNIPROTKB|Q5ZJ39 [details] [associations]
symbol:DENR "Density-regulated protein" species:9031
"Gallus gallus" [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR001950 Pfam:PF01253
PROSITE:PS50296 GO:GO:0003743 CTD:8562 eggNOG:COG0023
HOGENOM:HOG000237611 HOVERGEN:HBG005471 OrthoDB:EOG49PB0M
InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159 EMBL:AJ720595
IPI:IPI00580832 RefSeq:NP_001072973.1 UniGene:Gga.8483
ProteinModelPortal:Q5ZJ39 STRING:Q5ZJ39 PRIDE:Q5ZJ39 GeneID:771794
KEGG:gga:771794 InParanoid:Q5ZJ39 NextBio:20921989 Uniprot:Q5ZJ39
Length = 198
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 98/197 (49%), Positives = 133/197 (67%)
Query: 26 DVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKL 85
D + + +G + +YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P+EF KL +
Sbjct: 12 DCRGDIRSGARSDADYPLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLT-V 70
Query: 86 SGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQ-RGGKGIVKARKKEEVPKQVCVSRA 144
E E A ++EE KQ RGG+G +K +KK+ VP++V +++
Sbjct: 71 ENSPKQEAGVGEGQGT---------AGEEEEKKKQKRGGRGQIK-QKKKTVPQKVTIAKI 120
Query: 145 PRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPE 204
PR KKK VT V GL++F+IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI E
Sbjct: 121 PRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQE 180
Query: 205 KWPEIDEDFIEDLGDLK 221
KWPE+D+D IEDLG++K
Sbjct: 181 KWPEVDDDSIEDLGEVK 197
>UNIPROTKB|O43583 [details] [associations]
symbol:DENR "Density-regulated protein" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
EMBL:AC027290 GO:GO:0003743 CTD:8562 eggNOG:COG0023
HOGENOM:HOG000237611 HOVERGEN:HBG005471 OMA:PEYDKCK
OrthoDB:EOG49PB0M InterPro:IPR005873 SUPFAM:SSF55159
TIGRFAMs:TIGR01159 EMBL:AF038554 EMBL:AB014731 EMBL:AC026331
EMBL:BC007860 EMBL:AF103800 IPI:IPI00306280 RefSeq:NP_003668.2
UniGene:Hs.22393 ProteinModelPortal:O43583 SMR:O43583 IntAct:O43583
MINT:MINT-1405155 STRING:O43583 PhosphoSite:O43583 PaxDb:O43583
PRIDE:O43583 DNASU:8562 Ensembl:ENST00000280557 GeneID:8562
KEGG:hsa:8562 UCSC:uc001uda.3 GeneCards:GC12P123237 HGNC:HGNC:2769
HPA:HPA021783 MIM:604550 neXtProt:NX_O43583 PharmGKB:PA27252
InParanoid:O43583 ChiTaRS:DENR GenomeRNAi:8562 NextBio:32095
ArrayExpress:O43583 Bgee:O43583 CleanEx:HS_DENR
Genevestigator:O43583 GermOnline:ENSG00000139726 Uniprot:O43583
Length = 198
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 99/198 (50%), Positives = 131/198 (66%)
Query: 25 SDVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVK 84
+D K N + +YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P EF KL
Sbjct: 11 ADCKGDPRNSAKLDADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLT- 69
Query: 85 LSGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQ-RGGKGIVKARKKEEVPKQVCVSR 143
+ E E A ++EE KQ RGG+G +K +KK+ VP++V +++
Sbjct: 70 VENSPKQEAGISEGQGT---------AGEEEEKKKQKRGGRGQIK-QKKKTVPQKVTIAK 119
Query: 144 APRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIP 203
PR KKK VT V GL++F+IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI
Sbjct: 120 IPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQ 179
Query: 204 EKWPEIDEDFIEDLGDLK 221
EKWPE+D+D IEDLG++K
Sbjct: 180 EKWPEVDDDSIEDLGEVK 197
>MGI|MGI:1915434 [details] [associations]
symbol:Denr "density-regulated protein" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
MGI:MGI:1915434 GO:GO:0003743 CTD:8562 eggNOG:COG0023
GeneTree:ENSGT00390000014349 HOGENOM:HOG000237611
HOVERGEN:HBG005471 OMA:PEYDKCK OrthoDB:EOG49PB0M InterPro:IPR005873
SUPFAM:SSF55159 TIGRFAMs:TIGR01159 EMBL:AK017647 EMBL:AK018762
EMBL:AK135127 EMBL:BC043922 IPI:IPI00330057 RefSeq:NP_080879.1
UniGene:Mm.28549 ProteinModelPortal:Q9CQJ6 SMR:Q9CQJ6 STRING:Q9CQJ6
PhosphoSite:Q9CQJ6 PaxDb:Q9CQJ6 PRIDE:Q9CQJ6
Ensembl:ENSMUST00000023869 GeneID:68184 KEGG:mmu:68184
UCSC:uc008zor.1 InParanoid:Q9CQJ6 NextBio:326634 Bgee:Q9CQJ6
CleanEx:MM_DENR Genevestigator:Q9CQJ6 GermOnline:ENSMUSG00000023106
Uniprot:Q9CQJ6
Length = 198
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 98/198 (49%), Positives = 131/198 (66%)
Query: 25 SDVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVK 84
+D K N + +YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P EF KL
Sbjct: 11 ADCKGDTKNSAKLDADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTV 70
Query: 85 LSGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQ-RGGKGIVKARKKEEVPKQVCVSR 143
+ + TE ++EE KQ RGG+G +K +KK+ VP++V +++
Sbjct: 71 ENSPKQETGITEGQG----------PVGEEEEKKKQKRGGRGQIK-QKKKTVPQKVTIAK 119
Query: 144 APRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIP 203
PR KKK VT V GL++F+IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI
Sbjct: 120 IPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQ 179
Query: 204 EKWPEIDEDFIEDLGDLK 221
EKWPE+D+D IEDLG++K
Sbjct: 180 EKWPEVDDDSIEDLGEVK 197
>RGD|1584200 [details] [associations]
symbol:Denr "density-regulated protein" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
RGD:1584200 GO:GO:0003743 InterPro:IPR005873 SUPFAM:SSF55159
TIGRFAMs:TIGR01159 IPI:IPI00948812 Ensembl:ENSRNOT00000066853
UCSC:RGD:1584200 ArrayExpress:E9PTX5 Uniprot:E9PTX5
Length = 195
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 93/189 (49%), Positives = 127/189 (67%)
Query: 33 NGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDE 92
N + +YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P EF KL +
Sbjct: 15 NSAKLDADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVVPSPDKKS 74
Query: 93 DATEEXXXXXXXXXXIVKARKKEEVPKQRGGKGIVKARKKEEVPKQVCVSRAPRGKKKSV 152
TE +V +++ + K GG+G +K +KK+ VP++V +++ PR KKK V
Sbjct: 75 APTE--------GQRVVGQQEERKEKKSEGGRGQIK-QKKKTVPQKVTIAKIPRAKKKYV 125
Query: 153 TVVTGLSSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDED 212
T V GL++F+IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D
Sbjct: 126 TRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDD 185
Query: 213 FIEDLGDLK 221
IEDLG++K
Sbjct: 186 SIEDLGEVK 194
>UNIPROTKB|Q2HJ47 [details] [associations]
symbol:DENR "Density-regulated protein" species:9913 "Bos
taurus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
GO:GO:0003743 EMBL:BC113316 IPI:IPI00838127 RefSeq:NP_001039993.1
RefSeq:XP_001252166.1 UniGene:Bt.88754 ProteinModelPortal:Q2HJ47
PRIDE:Q2HJ47 Ensembl:ENSBTAT00000049318 GeneID:614238 GeneID:785243
KEGG:bta:614238 KEGG:bta:785243 CTD:8562 eggNOG:COG0023
GeneTree:ENSGT00390000014349 HOGENOM:HOG000237611
HOVERGEN:HBG005471 InParanoid:Q2HJ47 OMA:PEYDKCK OrthoDB:EOG49PB0M
NextBio:20877654 InterPro:IPR005873 SUPFAM:SSF55159
TIGRFAMs:TIGR01159 Uniprot:Q2HJ47
Length = 198
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 96/183 (52%), Positives = 126/183 (68%)
Query: 40 NYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATEEXX 99
+YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P EF KL + E E
Sbjct: 26 DYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLT-VENSPKQEAGISEGQ 84
Query: 100 XXXXXXXXIVKARKKEEVPKQ-RGGKGIVKARKKEEVPKQVCVSRAPRGKKKSVTVVTGL 158
A ++EE KQ RGG+G +K +KK+ VP++V +++ PR KKK VT V GL
Sbjct: 85 GT---------AGEEEEKKKQKRGGRGQIK-QKKKTVPQKVTIAKIPRAKKKYVTRVCGL 134
Query: 159 SSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLG 218
++F+IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDLG
Sbjct: 135 ATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLG 194
Query: 219 DLK 221
++K
Sbjct: 195 EVK 197
>UNIPROTKB|J9NSD0 [details] [associations]
symbol:DENR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR001950 Pfam:PF01253
PROSITE:PS50296 GO:GO:0003743 GeneTree:ENSGT00390000014349
InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159
EMBL:AAEX03014649 OMA:KAYCLAG Ensembl:ENSCAFT00000044193
Uniprot:J9NSD0
Length = 275
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 96/183 (52%), Positives = 126/183 (68%)
Query: 40 NYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATEEXX 99
+YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P EF KL + E E
Sbjct: 103 DYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLT-VENSPKQEAGISEGQ 161
Query: 100 XXXXXXXXIVKARKKEEVPKQ-RGGKGIVKARKKEEVPKQVCVSRAPRGKKKSVTVVTGL 158
A ++EE KQ RGG+G +K +KK+ VP++V +++ PR KKK VT V GL
Sbjct: 162 GT---------AGEEEEKKKQKRGGRGQIK-QKKKTVPQKVTIAKIPRAKKKYVTRVCGL 211
Query: 159 SSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLG 218
++F+IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDLG
Sbjct: 212 ATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLG 271
Query: 219 DLK 221
++K
Sbjct: 272 EVK 274
>ZFIN|ZDB-GENE-040718-450 [details] [associations]
symbol:denr "density-regulated protein"
species:7955 "Danio rerio" [GO:0003743 "translation initiation
factor activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
ZFIN:ZDB-GENE-040718-450 GO:GO:0003743 CTD:8562 eggNOG:COG0023
GeneTree:ENSGT00390000014349 HOGENOM:HOG000237611
HOVERGEN:HBG005471 OrthoDB:EOG49PB0M InterPro:IPR005873
SUPFAM:SSF55159 TIGRFAMs:TIGR01159 EMBL:BC076117 EMBL:BC095896
IPI:IPI00500904 RefSeq:NP_001002697.1 UniGene:Dr.11982
ProteinModelPortal:Q6DH65 STRING:Q6DH65 PRIDE:Q6DH65
Ensembl:ENSDART00000054153 GeneID:436970 KEGG:dre:436970
InParanoid:Q6DH65 NextBio:20831392 Bgee:Q6DH65 Uniprot:Q6DH65
Length = 208
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 98/189 (51%), Positives = 127/189 (67%)
Query: 41 YPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLV-------KLSGDGGDED 93
YP+ VLYCG CSLP EYCEY PE KCK WLEKN P+ F KL + G GG ED
Sbjct: 25 YPLKVLYCGVCSLPAEYCEYMPEPAKCKQWLEKNFPDVFAKLTLGTAPKQESKGGGGGED 84
Query: 94 ATEEXXXXXXXXXXIVKARKKEEVPKQ-RGGKGIVKARKKEEVPKQVCVSRAPRGKKKSV 152
A ++EE KQ RGG+G +K +KK+ VP++V +++ PR KKK V
Sbjct: 85 G-----GGGRGRGEAPPAGEEEEKKKQKRGGRGQIK-QKKKTVPQKVTIAKIPRAKKKYV 138
Query: 153 TVVTGLSSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDED 212
T V GL++FDI+LK A +FF +F+CG+SVT +DEI+IQGD DD+ DVI EKWPE+D+D
Sbjct: 139 TRVCGLATFDIELKEAQRFFAQKFSCGASVTAEDEIIIQGDFTDDIIDVIQEKWPEVDDD 198
Query: 213 FIEDLGDLK 221
I+DLG++K
Sbjct: 199 SIDDLGEVK 207
>UNIPROTKB|F1REW9 [details] [associations]
symbol:DENR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
GO:GO:0003743 GeneTree:ENSGT00390000014349 OMA:PEYDKCK
InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159 EMBL:CU468020
Ensembl:ENSSSCT00000010730 Uniprot:F1REW9
Length = 202
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/198 (47%), Positives = 132/198 (66%)
Query: 26 DVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKL 85
D K L + + +YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P EF KL
Sbjct: 12 DCKGDLKSNTKLDADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVE 71
Query: 86 SGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQRGGKGIVKARKKEEVPKQVCVSRAP 145
+ + TE + +KK++ + +GG+G +K +KK+ VP++V +++ P
Sbjct: 72 NSPKQEAGITEGQGTAGEE-----EEKKKQK--RDKGGRGQIK-QKKKTVPQKVTIAKIP 123
Query: 146 RGKKKSVTVVTGLSSF--DIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIP 203
R KKK VT V GL++F +IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI
Sbjct: 124 RAKKKYVTRVCGLATFVTEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQ 183
Query: 204 EKWPEIDEDFIEDLGDLK 221
EKWPE+D+D IEDLG++K
Sbjct: 184 EKWPEVDDDSIEDLGEVK 201
>UNIPROTKB|E1BZC2 [details] [associations]
symbol:DENR "Density-regulated protein" species:9031
"Gallus gallus" [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR001950 Pfam:PF01253
PROSITE:PS50296 GO:GO:0003743 GeneTree:ENSGT00390000014349
OMA:PEYDKCK InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159
EMBL:AADN02034896 IPI:IPI00683324 Ensembl:ENSGALT00000034620
Uniprot:E1BZC2
Length = 201
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 97/200 (48%), Positives = 132/200 (66%)
Query: 26 DVKKPLPNGPQEGVNYPISVLYCGN--CSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLV 83
D + + +G + +YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P+EF KL
Sbjct: 12 DCRGDIRSGARSDADYPLRVLYCGGKFCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLT 71
Query: 84 KLSGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQRGGK--GIVKARKKEEVPKQVCV 141
+ E E A ++EE KQ+ GK G +K +KK+ VP++V +
Sbjct: 72 -VENSPKQEAGVGEGQGT---------AGEEEEKKKQKRGKKRGQIK-QKKKTVPQKVTI 120
Query: 142 SRAPRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDV 201
++ PR KKK VT V GL++F+IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DV
Sbjct: 121 AKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDV 180
Query: 202 IPEKWPEIDEDFIEDLGDLK 221
I EKWPE+D+D IEDLG++K
Sbjct: 181 IQEKWPEVDDDSIEDLGEVK 200
>UNIPROTKB|E1BIK7 [details] [associations]
symbol:E1BIK7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
GO:GO:0003743 GeneTree:ENSGT00390000014349 InterPro:IPR005873
SUPFAM:SSF55159 TIGRFAMs:TIGR01159 EMBL:DAAA02045248
IPI:IPI00697375 Ensembl:ENSBTAT00000045998 OMA:KAYCLAG
Uniprot:E1BIK7
Length = 202
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 90/184 (48%), Positives = 127/184 (69%)
Query: 40 NYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATEEXX 99
+YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P EF KL E++ ++
Sbjct: 26 DYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTV-------ENSPKQEA 78
Query: 100 XXXXXXXXIVKARKKEEVPKQRGGKGIVKARKKEEVPKQVCVSRAPRGKKKSVTVVTGLS 159
+ +K++ + +GG+G +K +KK+ VP++V +++ PR KKK VT V GL+
Sbjct: 79 GISEGQGTAGEEEEKKKQKRDKGGRGQIK-QKKKTVPQKVTIAKIPRAKKKYVTRVCGLA 137
Query: 160 SF--DIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDL 217
+F +IDLK A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDL
Sbjct: 138 TFVTEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDL 197
Query: 218 GDLK 221
G++K
Sbjct: 198 GEVK 201
>FB|FBgn0030802 [details] [associations]
symbol:CG9099 species:7227 "Drosophila melanogaster"
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA]
InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296 EMBL:AE014298
GO:GO:0003743 eggNOG:COG0023 GeneTree:ENSGT00390000014349
InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159 EMBL:AY060757
RefSeq:NP_573176.1 UniGene:Dm.19728 SMR:Q9VX98 IntAct:Q9VX98
MINT:MINT-280600 STRING:Q9VX98 EnsemblMetazoa:FBtr0074347
EnsemblMetazoa:FBtr0310520 GeneID:32679 KEGG:dme:Dmel_CG9099
UCSC:CG9099-RA FlyBase:FBgn0030802 InParanoid:Q9VX98 OMA:ENVACAR
OrthoDB:EOG4QBZNK GenomeRNAi:32679 NextBio:779800 Uniprot:Q9VX98
Length = 189
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 86/103 (83%), Positives = 98/103 (95%)
Query: 119 KQRGGKGIVKARKKEEVPKQVCVSRAPRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFAC 178
++RGGKG+++ +KKE+VPK++CVSRA RGKKKSVTVVTGLS+FDIDLKVA+KFFGT+FAC
Sbjct: 85 QKRGGKGLLRVKKKEDVPKRICVSRAARGKKKSVTVVTGLSTFDIDLKVAAKFFGTKFAC 144
Query: 179 GSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLK 221
GSSVTGDDEIVIQGDVKDDLFDVIPEKW EIDED IEDLGD K
Sbjct: 145 GSSVTGDDEIVIQGDVKDDLFDVIPEKWAEIDEDVIEDLGDQK 187
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 45/109 (41%), Positives = 70/109 (64%)
Query: 25 SDVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVK 84
+ V L GP+EGV YPI + YCG+C++P+EYCEY+PEYEKCK WLE ++P++FE+L K
Sbjct: 9 NSVADRLQLGPREGVTYPIQMKYCGHCTMPIEYCEYYPEYEKCKEWLELHMPDDFERL-K 67
Query: 85 LSGDGGDEDATEEXXXXXXXXXX-IVKARKKEEVPKQRGGKGIVKARKK 132
+ + D T++ +++ +KKE+VPK+ + +KK
Sbjct: 68 IEEEAAAADGTDDDKKRQKRGGKGLLRVKKKEDVPKRICVSRAARGKKK 116
>WB|WBGene00012932 [details] [associations]
symbol:Y47D3A.21 species:6239 "Caenorhabditis elegans"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA]
InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296 GO:GO:0003743
eggNOG:COG0023 GeneTree:ENSGT00390000014349 HOGENOM:HOG000237611
OMA:PEYDKCK InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159
EMBL:AL117202 PIR:T31532 RefSeq:NP_499450.1
ProteinModelPortal:Q9NAH4 SMR:Q9NAH4 STRING:Q9NAH4 PaxDb:Q9NAH4
EnsemblMetazoa:Y47D3A.21 GeneID:176556 KEGG:cel:CELE_Y47D3A.21
UCSC:Y47D3A.21 CTD:176556 WormBase:Y47D3A.21 InParanoid:Q9NAH4
NextBio:893066 Uniprot:Q9NAH4
Length = 192
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 95/198 (47%), Positives = 125/198 (63%)
Query: 24 ESDVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLV 83
E+ V + L GP +GV+YP+ ++YCG CS+P EYC+Y + + C+ W +N PE E L
Sbjct: 5 ETAVIQSLAPGPIDGVSYPLKMVYCGQCSMPPEYCDYSGQTDVCRAWATQNAPELLEGL- 63
Query: 84 KLSGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQRGGKGIVKARKKEEVPKQVCVSR 143
++S DE A + K K Q G +KK P++V + R
Sbjct: 64 EIS----DEPAADGDEKKKQKRGG--KGSKTGAAAAQAAASG---GKKKGGGPQKVTLQR 114
Query: 144 APRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIP 203
PRGKK SVTV+ GL++FDIDLKVASK F +FACGSSVTG DEIVIQGDVKDDL D+IP
Sbjct: 115 EPRGKK-SVTVIKGLATFDIDLKVASKLFAQKFACGSSVTGADEIVIQGDVKDDLLDLIP 173
Query: 204 EKWPEIDEDFIEDLGDLK 221
EKW ++ ++ I+DLGD K
Sbjct: 174 EKWKQVTDEQIDDLGDKK 191
>UNIPROTKB|F8VVL1 [details] [associations]
symbol:DENR "Density-regulated protein" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
EMBL:AC027290 GO:GO:0003743 InterPro:IPR005873 SUPFAM:SSF55159
TIGRFAMs:TIGR01159 EMBL:AC026331 HGNC:HGNC:2769 ChiTaRS:DENR
IPI:IPI00940755 ProteinModelPortal:F8VVL1 SMR:F8VVL1
Ensembl:ENST00000455982 ArrayExpress:F8VVL1 Bgee:F8VVL1
Uniprot:F8VVL1
Length = 160
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 71/158 (44%), Positives = 96/158 (60%)
Query: 25 SDVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVK 84
+D K N + +YP+ VLYCG CSLP EYCEY P+ KC+ WLEKN P EF KL
Sbjct: 11 ADCKGDPRNSAKLDADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLT- 69
Query: 85 LSGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQ-RGGKGIVKARKKEEVPKQVCVSR 143
+ E E A ++EE KQ RGG+G +K +KK+ VP++V +++
Sbjct: 70 VENSPKQEAGISEGQGT---------AGEEEEKKKQKRGGRGQIK-QKKKTVPQKVTIAK 119
Query: 144 APRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGSS 181
PR KKK VT V GL++F+IDLK A +FF +F+CG+S
Sbjct: 120 IPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGAS 157
>UNIPROTKB|A4QVI3 [details] [associations]
symbol:TMA22 "Translation machinery-associated protein 22"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001950 Pfam:PF01253
PROSITE:PS50296 GO:GO:0005840 GO:GO:0003743 EMBL:CM001231
eggNOG:COG0023 InterPro:IPR005873 SUPFAM:SSF55159
TIGRFAMs:TIGR01159 RefSeq:XP_003710951.1 STRING:A4QVI3
GeneID:2678169 KEGG:mgr:MGG_04504 OrthoDB:EOG466ZWF Uniprot:A4QVI3
Length = 201
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 73/204 (35%), Positives = 114/204 (55%)
Query: 25 SDVKKPLPNGPQEGVNYPISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVK 84
+DV++P GP E ++ YCG CSLP EYCEY +KC+ WL++N E ++++
Sbjct: 2 ADVEQP-EAGPSEPQGREVT--YCGVCSLPPEYCEYGGTVKKCQDWLQRNNQEMYDRIW- 57
Query: 85 LSGDGGDEDATEEXXXXXXXXXXIVKARKKEEVPKQRGGKG-IVKARKKEEVPKQVC-VS 142
+ E + ++ E+ K++ K +A+ +++ K V V
Sbjct: 58 ----------SPEALQAATAALSVEAQQRAEKDAKKKAAKAEAAEAKHADKLKKSVVTVK 107
Query: 143 RAPRGKKKSVTVVTGLSSFDIDLKVASKFFGTRFACGSSVT----GDDEIVIQGDVKDDL 198
R R K+K VT V+GL SF ++LK +K FG +FA GSSVT G +EIV+QGDV D++
Sbjct: 108 RIERNKRKYVTSVSGLESFGLELKKVAKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEI 167
Query: 199 FDVIPEKWPEIDEDFIEDLGDLKS 222
+ I EK+ ++ ED IE + D K+
Sbjct: 168 KEFIVEKYKDVPEDNIELVDDKKN 191
>TAIR|locus:2143079 [details] [associations]
symbol:AT5G11900 species:3702 "Arabidopsis thaliana"
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006413
"translational initiation" evidence=IEA;ISS] InterPro:IPR001950
Pfam:PF01253 PROSITE:PS50296 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003743 eggNOG:COG0023
HOGENOM:HOG000237611 OMA:PEYDKCK InterPro:IPR005873 SUPFAM:SSF55159
TIGRFAMs:TIGR01159 EMBL:AY064058 EMBL:BT008585 EMBL:AK175446
EMBL:AK175688 EMBL:AK176536 EMBL:AK221140 IPI:IPI00541205
RefSeq:NP_196751.2 UniGene:At.27058 ProteinModelPortal:Q8VZK2
SMR:Q8VZK2 STRING:Q8VZK2 PaxDb:Q8VZK2 PRIDE:Q8VZK2 DNASU:831063
EnsemblPlants:AT5G11900.1 GeneID:831063 KEGG:ath:AT5G11900
TAIR:At5g11900 InParanoid:Q8VZK2 PhylomeDB:Q8VZK2
ProtClustDB:CLSN2690153 ArrayExpress:Q8VZK2 Genevestigator:Q8VZK2
Uniprot:Q8VZK2
Length = 198
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 69/191 (36%), Positives = 105/191 (54%)
Query: 42 PISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATEEXXXX 101
P+ VLYCG CSLP EYCE+ P++ +CK WL +N P+ + L+K + + ++ +++
Sbjct: 7 PVKVLYCGVCSLPAEYCEFGPDFARCKPWLVENAPDLYPDLLKEANEKAADNVSDKLQSV 66
Query: 102 XXXXXXIVKA---------RKKEEVPKQRGGKGIVKARKKEEVPKQVCVSRAPRGKKKSV 152
A KKEEV + GGK VK + ++EV + + R K+K +
Sbjct: 67 GISSGGADGAPSSAQTGGTSKKEEVKRLPGGK--VKKKDRQEV----IIEKVVRNKRKCI 120
Query: 153 TVVTGLSSFDIDLKVASKFFGTRFACGSSV----TGDDEIVIQGDVKDDLFDVIPEKWPE 208
T+V GL F I L ASK G +FA G+SV T ++I +QGD+ D+ + I + WP+
Sbjct: 121 TIVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTWPD 180
Query: 209 IDED---FIED 216
+ E FIED
Sbjct: 181 VPERSIFFIED 191
>POMBASE|SPBC16C6.05 [details] [associations]
symbol:SPBC16C6.05 "mitochondrial translation initiation
factor (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296 PomBase:SPBC16C6.05
GO:GO:0005739 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005840
GO:GO:0032543 GO:GO:0003743 eggNOG:COG0023 HOGENOM:HOG000237611
OMA:PEYDKCK InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159
OrthoDB:EOG466ZWF PIR:T39556 RefSeq:NP_596803.1
ProteinModelPortal:O42929 STRING:O42929 EnsemblFungi:SPBC16C6.05.1
GeneID:2540154 KEGG:spo:SPBC16C6.05 NextBio:20801289 Uniprot:O42929
Length = 190
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 70/184 (38%), Positives = 103/184 (55%)
Query: 44 SVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATEEXXXXXX 103
SVLYC C+LPVEYCE+ +KCK WL+ + P+ ++KL G++D +++
Sbjct: 11 SVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLY------GEQDLSKDLENTLN 64
Query: 104 XXXXIVKARKKEEVP-KQRGGKGIVKARKKEEVPKQVCVSRAPRGKKKSVTVVTGLSSFD 162
K EE P K + V+ + + + +V + R K+K VT V GL +F
Sbjct: 65 VSGT--KDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQGLDAFG 122
Query: 163 IDLKVASKFFGTRFACGSSVT--GD--DEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLG 218
I+ K A+K +FA G+SVT D DEIV+QGD+ D+FD I EK+ E+ ED I+ +
Sbjct: 123 IETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNIKIVE 182
Query: 219 DLKS 222
D KS
Sbjct: 183 DTKS 186
>ASPGD|ASPL0000050181 [details] [associations]
symbol:AN8883 species:162425 "Emericella nidulans"
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296 EMBL:BN001307
GO:GO:0003743 HOGENOM:HOG000237611 SUPFAM:SSF55159 OMA:TEYCEYG
EnsemblFungi:CADANIAT00007987 Uniprot:C8VLT7
Length = 196
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 62/183 (33%), Positives = 95/183 (51%)
Query: 45 VLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATEEXXXXXXX 104
+ YCG C+LP EYCE+ +KC+ WL+ N EE+++L DE +
Sbjct: 16 ITYCGVCTLPPEYCEFGGTAKKCQEWLKDNRLEEYQRLYS------DEAISANLSTLSVS 69
Query: 105 XXXIVKARKKEEVPKQRGGKGIVKARKKEE-VPKQVCVSRAPRGKKKSVTVVTGLSSFDI 163
V+ R ++ K+ +AR E +V + R R K+K V+VVTGL + +
Sbjct: 70 ----VQERAAKDAAKKEAKAAAAEARDAERRATSKVQIKRVERNKRKHVSVVTGLEVYGL 125
Query: 164 DLKVASKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEKWPE-IDEDFIEDLG 218
+ K +K G +FA GSSVT G +EI +QGDV +D+ + + E + + I E IE +
Sbjct: 126 ENKKVAKELGKKFATGSSVTKSASGIEEITVQGDVCEDIKEWLLENYGKGISESNIEIVE 185
Query: 219 DLK 221
D K
Sbjct: 186 DKK 188
>SGD|S000003775 [details] [associations]
symbol:TMA22 "Protein of unknown function" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;IDA] InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
SGD:S000003775 GO:GO:0005737 EMBL:BK006943 GO:GO:0003723
GO:GO:0005840 GO:GO:0003743 EMBL:X87611 eggNOG:COG0023
GeneTree:ENSGT00390000014349 HOGENOM:HOG000237611
InterPro:IPR005873 SUPFAM:SSF55159 TIGRFAMs:TIGR01159 OMA:TEYCEYG
OrthoDB:EOG466ZWF EMBL:Z49514 EMBL:AY557898 PIR:S55203
RefSeq:NP_012548.1 ProteinModelPortal:P47089 SMR:P47089
DIP:DIP-6768N IntAct:P47089 MINT:MINT-628686 STRING:P47089
PaxDb:P47089 PeptideAtlas:P47089 EnsemblFungi:YJR014W GeneID:853471
KEGG:sce:YJR014W CYGD:YJR014w NextBio:974071 Genevestigator:P47089
GermOnline:YJR014W Uniprot:P47089
Length = 198
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 56/163 (34%), Positives = 91/163 (55%)
Query: 45 VLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATE-EXXXXXX 103
V+YCG CS P EYCE+ + ++CKVWL +N + + KL G D++ E E
Sbjct: 5 VIYCGICSYPPEYCEFSGKLKRCKVWLSENHADLYAKLY-----GTDDNTQEVEAVTNKL 59
Query: 104 XXXXIVKARK----KEEVPKQRGGKGIVKARKKEEVPKQVCVSRAPRGKKKSVTVVTGLS 159
I +AR+ K+ + Q+ + + +++ +V + R R K+K + ++GL
Sbjct: 60 AESSIGEAREEKLEKDLLKIQKKQENREQRELAKKLSSKVIIKREARTKRKFIVAISGLE 119
Query: 160 SFDIDLKVASKFFGTRFACGSSVTGD----DEIVIQGDVKDDL 198
FDID+K +K F +RFA G SV+ + +E+VIQGDV D++
Sbjct: 120 VFDIDMKKLAKTFASRFATGCSVSKNAEKKEEVVIQGDVMDEV 162
>DICTYBASE|DDB_G0279677 [details] [associations]
symbol:denr "density-regulated protein" species:44689
"Dictyostelium discoideum" [GO:0006413 "translational initiation"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296
dictyBase:DDB_G0279677 GenomeReviews:CM000152_GR GO:GO:0003743
EMBL:AAFI02000032 eggNOG:COG0023 SUPFAM:SSF55159 RefSeq:XP_641593.1
ProteinModelPortal:Q54WG0 EnsemblProtists:DDB0266779 GeneID:8622167
KEGG:ddi:DDB_G0279677 OMA:TEYCEYG ProtClustDB:CLSZ2495984
Uniprot:Q54WG0
Length = 224
Score = 160 (61.4 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 110 KARKKEEVPKQRGGKGIVKARKKEEVPKQVCVSRAPRGKKKSVTVVTGLSSFDIDLKVAS 169
K+ KE +++ + + K KK+EV Q+ + R K+K VT +TGL + I L A+
Sbjct: 104 KSESKEATGEEKEKEKVSK--KKKEVKPQIIIEVNQRNKRKHVTKITGLELYGIKLSDAA 161
Query: 170 KFFGTRFACGSSVT------GDDEIVIQGDVKDDLFDVIPEKWPEIDED---FIEDLGDL 220
K +F+CG SV ++I IQGD ++L D+I EK+P + F+ED +
Sbjct: 162 KVMAKKFSCGCSVVKSISNPNSEDIDIQGDFGEELVDLIEEKYPTVPLSEIYFLEDKKKV 221
Query: 221 KS 222
K+
Sbjct: 222 KA 223
Score = 93 (37.8 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 42 PISVL-YCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSG-DGGDEDAT 95
PI V+ YC CSLP EYCEY P ++C L++N P SG D + AT
Sbjct: 12 PIVVVEYCKICSLPTEYCEYGPSAKQC---LKENGPHPNNNKNTASGKDSSNTTAT 64
>CGD|CAL0005783 [details] [associations]
symbol:orf19.4164 species:5476 "Candida albicans" [GO:0005840
"ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001950 Pfam:PF01253 PROSITE:PS50296 CGD:CAL0005783
GO:GO:0003743 eggNOG:COG0023 SUPFAM:SSF55159 EMBL:AACQ01000151
EMBL:AACQ01000146 RefSeq:XP_712618.1 RefSeq:XP_712768.1
ProteinModelPortal:Q59SK8 STRING:Q59SK8 GeneID:3645597
GeneID:3645760 KEGG:cal:CaO19.11640 KEGG:cal:CaO19.4164
Uniprot:Q59SK8
Length = 244
Score = 120 (47.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 42 PISVLYCGNCSLPVEYCEYHPEYEKCKVWLEKNLPEEFEKLVKLSGDGGDEDATEE 97
P S+LYCG CS P E+CE+ +KC+ WL +N P+ ++ + +G+ + +E
Sbjct: 6 PKSILYCGICSWPPEFCEFGITKKKCQTWLNENHPDLYQSVYPTAGNLSTANTPDE 61
Score = 103 (41.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 36/135 (26%), Positives = 65/135 (48%)
Query: 88 DGGDED-ATEEXXXXXXXXXXIVKARKKEEVPKQRGGKGIVKARKK--EEVPK-QVCVSR 143
DG ++D T++ I K K ++ +R K +K +K E++ ++ + +
Sbjct: 85 DGSNDDIVTKKLLEKGVSELSISKEEKLQQELNKRAAKEELKLERKQLEKISNSKIIIKK 144
Query: 144 APRGKKKSVTVVTGL------------SSFDIDLKVASKFFGTRFACGSSVTGDDE---- 187
R KKKS+ ++GL S+ + +K K F ++FA G+SV + E
Sbjct: 145 ISRNKKKSIVSISGLEILETTAGTTGTSNNKVSIKSLQKKFSSKFATGTSVVKNAENKSD 204
Query: 188 IVIQGDVKDDLFDVI 202
I+IQGDV +++ I
Sbjct: 205 ILIQGDVFEEVHQFI 219
>UNIPROTKB|Q9KM19 [details] [associations]
symbol:VC_A0570 "Sui1 family protein" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001950
InterPro:IPR005872 Pfam:PF01253 PIRSF:PIRSF037511 PROSITE:PS50296
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0003743
SUPFAM:SSF55159 KO:K03113 OMA:IEIQGDN ProtClustDB:PRK09019
TIGRFAMs:TIGR01158 HSSP:P08245 PIR:G82442 RefSeq:NP_232960.1
ProteinModelPortal:Q9KM19 SMR:Q9KM19 DNASU:2612391 GeneID:2612391
KEGG:vch:VCA0570 PATRIC:20085694 Uniprot:Q9KM19
Length = 103
Score = 104 (41.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 125 GIVKAR-KKEEVPKQ---VCVSRAPRGKK-KSVTVVTGLSSFDIDLKVASKFFGTRFACG 179
G +K +K E PK V + R +G+K K VT+V GL D LK+ + + CG
Sbjct: 10 GRIKPEHEKIERPKGDGIVRIFRETKGRKGKGVTIVKGLDLDDAALKLLAAELKKKCGCG 69
Query: 180 SSVTGDDEIVIQGDVKDDLFDVIPEK 205
+V D +I IQGDV+D L ++ K
Sbjct: 70 GAVK-DGDIEIQGDVRDQLKTLLESK 94
>TIGR_CMR|VC_A0570 [details] [associations]
symbol:VC_A0570 "Sui1 family protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001950 InterPro:IPR005872 Pfam:PF01253
PIRSF:PIRSF037511 PROSITE:PS50296 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0003743 SUPFAM:SSF55159 KO:K03113
OMA:IEIQGDN ProtClustDB:PRK09019 TIGRFAMs:TIGR01158 HSSP:P08245
PIR:G82442 RefSeq:NP_232960.1 ProteinModelPortal:Q9KM19 SMR:Q9KM19
DNASU:2612391 GeneID:2612391 KEGG:vch:VCA0570 PATRIC:20085694
Uniprot:Q9KM19
Length = 103
Score = 104 (41.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/86 (37%), Positives = 46/86 (53%)
Query: 125 GIVKAR-KKEEVPKQ---VCVSRAPRGKK-KSVTVVTGLSSFDIDLKVASKFFGTRFACG 179
G +K +K E PK V + R +G+K K VT+V GL D LK+ + + CG
Sbjct: 10 GRIKPEHEKIERPKGDGIVRIFRETKGRKGKGVTIVKGLDLDDAALKLLAAELKKKCGCG 69
Query: 180 SSVTGDDEIVIQGDVKDDLFDVIPEK 205
+V D +I IQGDV+D L ++ K
Sbjct: 70 GAVK-DGDIEIQGDVRDQLKTLLESK 94
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.138 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 243 233 0.00086 113 3 11 22 0.47 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 605 (64 KB)
Total size of DFA: 196 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.86u 0.12s 22.98t Elapsed: 00:00:01
Total cpu time: 22.86u 0.12s 22.98t Elapsed: 00:00:01
Start: Thu Aug 15 13:20:31 2013 End: Thu Aug 15 13:20:32 2013