Query psy14511
Match_columns 488
No_of_seqs 766 out of 2115
Neff 12.0
Searched_HMMs 29240
Date Fri Aug 16 21:47:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14511.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14511hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 4.5E-55 1.5E-59 424.8 47.5 392 2-485 27-568 (611)
2 1nr0_A Actin interacting prote 100.0 4E-54 1.4E-58 418.1 45.3 393 1-483 67-610 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 5.3E-52 1.8E-56 402.9 49.5 423 1-480 24-576 (577)
4 2ymu_A WD-40 repeat protein; u 100.0 5.8E-48 2E-52 374.5 46.5 411 29-463 9-443 (577)
5 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-47 6E-52 402.8 43.8 448 2-486 624-1160(1249)
6 2oaj_A Protein SNI1; WD40 repe 100.0 6E-47 2.1E-51 380.3 44.8 404 2-486 26-666 (902)
7 1pgu_A Actin interacting prote 100.0 1.5E-46 5.2E-51 367.6 43.6 388 2-484 27-614 (615)
8 3sfz_A APAF-1, apoptotic pepti 100.0 3.2E-46 1.1E-50 393.3 45.3 417 2-464 666-1196(1249)
9 3ow8_A WD repeat-containing pr 100.0 2.6E-45 8.8E-50 326.9 38.0 288 30-435 26-320 (321)
10 1vyh_C Platelet-activating fac 100.0 2.5E-45 8.5E-50 338.8 37.5 285 30-435 102-410 (410)
11 1got_B GT-beta; complex (GTP-b 100.0 3.3E-45 1.1E-49 329.7 36.8 282 29-433 48-340 (340)
12 3iz6_a 40S ribosomal protein R 100.0 2.8E-46 9.5E-51 342.0 27.2 305 16-439 47-378 (380)
13 2pbi_B Guanine nucleotide-bind 100.0 6.3E-45 2.2E-49 329.2 34.3 285 29-433 57-354 (354)
14 4g56_B MGC81050 protein; prote 100.0 1.3E-44 4.3E-49 327.5 32.9 306 8-438 19-345 (357)
15 2ynn_A Coatomer subunit beta'; 100.0 1.5E-43 5.3E-48 313.6 37.1 283 28-436 5-302 (304)
16 4ery_A WD repeat-containing pr 100.0 5.2E-43 1.8E-47 312.2 39.6 283 28-435 15-311 (312)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.1E-44 2.8E-48 321.2 34.7 293 29-441 8-340 (345)
18 2oaj_A Protein SNI1; WD40 repe 100.0 3.8E-43 1.3E-47 352.8 42.7 388 5-455 69-690 (902)
19 3mkq_A Coatomer beta'-subunit; 100.0 4.1E-43 1.4E-47 354.4 43.0 358 2-458 22-438 (814)
20 3frx_A Guanine nucleotide-bind 100.0 4.6E-43 1.6E-47 312.6 36.2 284 29-437 10-318 (319)
21 4gqb_B Methylosome protein 50; 100.0 3.4E-43 1.2E-47 315.2 35.4 296 17-438 16-333 (344)
22 1pgu_A Actin interacting prote 100.0 5.3E-43 1.8E-47 342.5 38.7 381 4-436 171-614 (615)
23 1vyh_C Platelet-activating fac 100.0 6.8E-43 2.3E-47 322.5 35.3 270 2-354 117-410 (410)
24 1r5m_A SIR4-interacting protei 100.0 1.7E-42 5.8E-47 323.2 37.1 344 2-435 54-424 (425)
25 2xzm_R RACK1; ribosome, transl 100.0 2.7E-42 9.4E-47 311.2 37.1 306 29-438 14-342 (343)
26 4aow_A Guanine nucleotide-bind 100.0 9.1E-42 3.1E-46 308.3 40.2 303 28-439 30-340 (340)
27 2pm9_A Protein WEB1, protein t 100.0 1.1E-43 3.6E-48 330.3 27.7 322 3-437 22-415 (416)
28 2ynn_A Coatomer subunit beta'; 100.0 4.7E-42 1.6E-46 304.0 36.3 267 72-460 5-284 (304)
29 3ow8_A WD repeat-containing pr 100.0 4.3E-42 1.5E-46 306.0 34.4 267 4-354 47-320 (321)
30 1erj_A Transcriptional repress 100.0 1.9E-41 6.6E-46 311.4 39.5 304 15-438 40-391 (393)
31 1gxr_A ESG1, transducin-like e 100.0 1.5E-41 5E-46 306.6 37.0 309 2-434 18-335 (337)
32 3mkq_A Coatomer beta'-subunit; 100.0 6.1E-42 2.1E-46 345.8 35.1 371 3-464 65-486 (814)
33 4g56_B MGC81050 protein; prote 100.0 7.5E-42 2.6E-46 309.3 30.9 279 1-356 50-344 (357)
34 4gqb_B Methylosome protein 50; 100.0 1E-41 3.4E-46 305.7 30.8 277 2-357 39-333 (344)
35 3vl1_A 26S proteasome regulato 100.0 4.6E-41 1.6E-45 312.9 36.1 308 2-436 65-419 (420)
36 1got_B GT-beta; complex (GTP-b 100.0 1.2E-40 3.9E-45 300.1 35.6 269 3-352 65-340 (340)
37 1r5m_A SIR4-interacting protei 100.0 7E-41 2.4E-45 312.3 34.7 335 15-482 25-423 (425)
38 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.3E-41 2.5E-45 301.8 33.0 278 2-358 25-338 (345)
39 2j04_B YDR362CP, TAU91; beta p 100.0 7.6E-42 2.6E-46 321.3 27.4 307 4-437 172-518 (524)
40 2pbi_B Guanine nucleotide-bind 100.0 3.4E-40 1.2E-44 298.2 36.0 273 2-352 73-354 (354)
41 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.8E-40 3.3E-44 305.9 39.7 316 29-437 111-443 (445)
42 3zwl_B Eukaryotic translation 100.0 5.1E-40 1.7E-44 300.4 36.3 285 30-440 26-350 (369)
43 3ei3_B DNA damage-binding prot 100.0 4.4E-40 1.5E-44 302.2 34.0 287 29-436 66-382 (383)
44 2hes_X YDR267CP; beta-propelle 100.0 7.3E-40 2.5E-44 293.4 33.6 289 29-436 7-328 (330)
45 1gxr_A ESG1, transducin-like e 100.0 5.9E-40 2E-44 296.1 33.0 318 35-482 8-335 (337)
46 2pm9_A Protein WEB1, protein t 100.0 8.6E-41 2.9E-45 310.7 28.0 322 37-485 13-415 (416)
47 4e54_B DNA damage-binding prot 100.0 2.6E-40 8.7E-45 308.3 30.8 290 30-440 113-434 (435)
48 3gre_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44 308.5 31.2 345 3-433 37-437 (437)
49 4a11_B DNA excision repair pro 100.0 1.1E-39 3.8E-44 302.4 34.5 305 13-441 21-370 (408)
50 3v7d_B Cell division control p 100.0 4.9E-39 1.7E-43 303.1 38.5 327 3-433 130-460 (464)
51 2hes_X YDR267CP; beta-propelle 100.0 8.1E-40 2.8E-44 293.1 31.5 275 3-355 22-328 (330)
52 3iz6_a 40S ribosomal protein R 100.0 3.2E-40 1.1E-44 301.8 28.8 279 2-356 75-376 (380)
53 4ery_A WD repeat-containing pr 100.0 2.2E-39 7.7E-44 288.6 33.4 269 2-354 32-311 (312)
54 4gga_A P55CDC, cell division c 100.0 2.7E-38 9.1E-43 293.4 41.5 298 178-485 85-396 (420)
55 4ggc_A P55CDC, cell division c 100.0 1.2E-38 4.1E-43 285.1 37.1 261 177-439 4-318 (318)
56 3frx_A Guanine nucleotide-bind 100.0 7.5E-39 2.5E-43 285.4 32.3 264 4-395 29-318 (319)
57 3dm0_A Maltose-binding peripla 100.0 2.1E-38 7.3E-43 313.0 38.8 310 30-436 376-693 (694)
58 1sq9_A Antiviral protein SKI8; 100.0 6E-39 2E-43 296.4 32.3 294 29-438 9-397 (397)
59 3odt_A Protein DOA1; ubiquitin 100.0 6.3E-38 2.2E-42 279.7 37.8 296 21-445 3-305 (313)
60 3k26_A Polycomb protein EED; W 100.0 3.2E-39 1.1E-43 294.8 29.2 297 30-436 12-366 (366)
61 4aez_A CDC20, WD repeat-contai 100.0 2.4E-38 8.1E-43 292.0 34.2 278 2-441 100-385 (401)
62 1erj_A Transcriptional repress 100.0 4.1E-38 1.4E-42 289.2 34.9 270 2-356 73-390 (393)
63 1k8k_C P40, ARP2/3 complex 41 100.0 4.7E-39 1.6E-43 294.4 28.2 321 31-440 3-365 (372)
64 3vl1_A 26S proteasome regulato 100.0 6.3E-39 2.2E-43 298.5 29.5 312 38-484 58-419 (420)
65 4gga_A P55CDC, cell division c 100.0 1.4E-37 4.9E-42 288.5 38.2 284 38-440 107-399 (420)
66 3dwl_C Actin-related protein 2 100.0 2.8E-39 9.5E-44 296.3 25.1 315 3-434 21-377 (377)
67 2xzm_R RACK1; ribosome, transl 100.0 1.5E-37 5E-42 280.3 35.1 278 4-356 38-341 (343)
68 3i2n_A WD repeat-containing pr 100.0 2.6E-38 9E-43 287.7 29.8 288 26-439 8-356 (357)
69 3v7d_B Cell division control p 100.0 2.1E-37 7.2E-42 291.9 36.5 296 29-455 114-442 (464)
70 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.4E-37 1.5E-41 287.9 38.3 298 2-394 126-442 (445)
71 4aez_A CDC20, WD repeat-contai 100.0 4E-37 1.4E-41 283.8 37.0 298 179-487 74-383 (401)
72 4h5i_A Guanine nucleotide-exch 100.0 1.5E-38 5.2E-43 288.3 27.0 194 240-437 132-344 (365)
73 2pm7_B Protein transport prote 100.0 5.1E-37 1.7E-41 270.7 33.0 252 30-436 3-285 (297)
74 1p22_A F-BOX/WD-repeat protein 100.0 7.3E-37 2.5E-41 285.3 31.7 301 33-455 130-433 (435)
75 3dw8_B Serine/threonine-protei 100.0 2.5E-36 8.5E-41 283.4 34.2 316 34-434 26-444 (447)
76 3bg1_A Protein SEC13 homolog; 100.0 2.3E-37 8E-42 275.3 24.4 255 28-436 5-293 (316)
77 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-36 4.2E-41 275.8 29.0 303 28-441 3-342 (351)
78 1yfq_A Cell cycle arrest prote 100.0 3.8E-36 1.3E-40 271.7 31.4 279 31-434 6-322 (342)
79 2j04_A TAU60, YPL007P, hypothe 100.0 6.7E-38 2.3E-42 286.3 19.4 308 2-424 24-349 (588)
80 3odt_A Protein DOA1; ubiquitin 100.0 2.7E-35 9.3E-40 262.6 34.6 270 4-358 28-299 (313)
81 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-36 9.6E-41 278.5 28.4 274 8-440 50-346 (402)
82 3i2n_A WD repeat-containing pr 100.0 5.5E-36 1.9E-40 272.4 29.0 274 4-356 29-354 (357)
83 1sq9_A Antiviral protein SKI8; 100.0 1.8E-35 6.3E-40 273.0 32.4 284 2-356 23-396 (397)
84 4aow_A Guanine nucleotide-bind 100.0 5.9E-35 2E-39 263.7 34.6 236 240-487 85-340 (340)
85 4e54_B DNA damage-binding prot 100.0 5.1E-37 1.7E-41 286.1 21.2 275 4-357 131-432 (435)
86 3zwl_B Eukaryotic translation 100.0 9.2E-35 3.1E-39 265.5 35.4 281 2-356 41-347 (369)
87 3ei3_B DNA damage-binding prot 100.0 1.6E-35 5.6E-40 271.8 30.0 267 3-355 83-382 (383)
88 3dm0_A Maltose-binding peripla 100.0 8E-35 2.7E-39 287.5 36.7 268 4-354 394-692 (694)
89 3mmy_A MRNA export factor; mRN 100.0 1.8E-35 6.1E-40 270.2 29.6 285 29-438 32-348 (368)
90 2j04_B YDR362CP, TAU91; beta p 100.0 3.3E-36 1.1E-40 283.1 24.6 220 240-462 206-459 (524)
91 2pm7_B Protein transport prote 100.0 7.2E-35 2.5E-39 257.0 30.1 235 2-355 18-285 (297)
92 4h5i_A Guanine nucleotide-exch 100.0 3.1E-35 1.1E-39 266.6 28.1 276 2-356 23-344 (365)
93 1p22_A F-BOX/WD-repeat protein 100.0 6E-35 2E-39 272.3 29.7 264 2-357 140-416 (435)
94 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-34 7.2E-39 263.5 31.3 288 77-487 5-364 (372)
95 3dwl_C Actin-related protein 2 100.0 9E-36 3.1E-40 273.0 22.0 250 31-435 6-280 (377)
96 2j04_A TAU60, YPL007P, hypothe 100.0 1E-34 3.6E-39 265.4 28.6 286 35-467 14-351 (588)
97 3bg1_A Protein SEC13 homolog; 100.0 3.8E-35 1.3E-39 261.1 24.9 232 2-354 22-292 (316)
98 1l0q_A Surface layer protein; 100.0 2.8E-32 9.7E-37 251.0 42.2 327 5-465 2-366 (391)
99 4a11_B DNA excision repair pro 100.0 6.8E-34 2.3E-38 263.5 31.5 307 4-394 55-405 (408)
100 3k26_A Polycomb protein EED; W 100.0 3.9E-34 1.3E-38 261.1 29.2 230 240-482 68-364 (366)
101 3gre_A Serine/threonine-protei 100.0 1.7E-34 5.9E-39 269.9 27.1 260 4-343 75-391 (437)
102 3lrv_A PRE-mRNA-splicing facto 100.0 9.5E-34 3.3E-38 255.5 30.6 275 38-436 38-333 (343)
103 3jrp_A Fusion protein of prote 100.0 6.4E-34 2.2E-38 261.0 29.2 248 29-355 4-287 (379)
104 3vu4_A KMHSV2; beta-propeller 100.0 3.4E-33 1.2E-37 252.5 31.9 313 19-439 3-339 (355)
105 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-33 7.4E-38 262.9 31.2 281 37-437 5-392 (450)
106 3mmy_A MRNA export factor; mRN 100.0 1.3E-33 4.3E-38 257.9 28.3 266 5-354 54-345 (368)
107 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-32 6.6E-37 252.8 34.0 271 39-461 37-328 (402)
108 3dw8_B Serine/threonine-protei 100.0 1.4E-33 4.7E-38 264.7 26.3 276 2-354 37-445 (447)
109 1yfq_A Cell cycle arrest prote 100.0 8.5E-33 2.9E-37 249.7 30.0 263 3-352 21-321 (342)
110 2xyi_A Probable histone-bindin 100.0 5.3E-33 1.8E-37 258.4 28.8 272 30-438 122-412 (430)
111 4ggc_A P55CDC, cell division c 100.0 7.2E-32 2.5E-36 241.0 33.6 273 39-396 28-317 (318)
112 3f3f_A Nucleoporin SEH1; struc 100.0 5.4E-33 1.9E-37 251.8 26.1 290 2-357 20-339 (351)
113 3bws_A Protein LP49; two-domai 100.0 1E-31 3.5E-36 250.9 34.6 302 11-436 95-432 (433)
114 3jrp_A Fusion protein of prote 100.0 7E-32 2.4E-36 247.4 30.1 254 73-438 4-289 (379)
115 3vu4_A KMHSV2; beta-propeller 100.0 3.3E-31 1.1E-35 239.5 33.5 274 61-464 3-323 (355)
116 4gq1_A NUP37; propeller, trans 100.0 1.4E-32 4.6E-37 252.2 24.0 253 42-435 95-388 (393)
117 2w18_A PALB2, fancn, partner a 100.0 8.4E-32 2.9E-36 231.0 27.1 267 8-434 57-355 (356)
118 4gq1_A NUP37; propeller, trans 100.0 8.4E-33 2.9E-37 253.6 21.7 254 3-354 99-388 (393)
119 3jro_A Fusion protein of prote 100.0 2.1E-32 7.2E-37 271.5 24.5 247 30-355 3-285 (753)
120 1nir_A Nitrite reductase; hemo 100.0 1E-30 3.5E-35 248.0 34.5 330 2-404 146-524 (543)
121 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-31 3.8E-36 241.9 25.7 260 3-391 46-330 (343)
122 1l0q_A Surface layer protein; 100.0 7.7E-30 2.6E-34 234.8 36.2 266 49-441 3-280 (391)
123 1k32_A Tricorn protease; prote 100.0 6E-30 2.1E-34 263.4 36.0 409 3-465 22-490 (1045)
124 2xyi_A Probable histone-bindin 100.0 4.4E-30 1.5E-34 238.8 29.2 200 240-484 180-410 (430)
125 3bws_A Protein LP49; two-domai 100.0 2.7E-29 9.3E-34 234.4 34.3 232 240-482 168-430 (433)
126 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.7E-29 5.8E-34 236.5 32.0 237 34-354 100-390 (450)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.8E-29 9.6E-34 231.4 32.5 294 5-459 75-410 (415)
128 1nir_A Nitrite reductase; hemo 100.0 3.5E-29 1.2E-33 237.5 33.7 318 43-487 144-517 (543)
129 3jro_A Fusion protein of prote 100.0 1.4E-30 4.6E-35 258.5 23.7 252 75-438 4-287 (753)
130 1k32_A Tricorn protease; prote 100.0 1.8E-28 6.1E-33 252.5 34.7 218 210-434 257-500 (1045)
131 2w18_A PALB2, fancn, partner a 100.0 1.7E-28 5.9E-33 210.6 25.6 277 38-482 41-355 (356)
132 1xfd_A DIP, dipeptidyl aminope 100.0 2.8E-28 9.4E-33 242.7 28.1 346 4-464 27-427 (723)
133 2ecf_A Dipeptidyl peptidase IV 100.0 1.3E-27 4.5E-32 238.4 30.5 318 2-438 45-461 (741)
134 2z3z_A Dipeptidyl aminopeptida 100.0 9.8E-27 3.4E-31 230.8 30.1 347 2-438 32-437 (706)
135 2ecf_A Dipeptidyl peptidase IV 100.0 1.8E-26 6.1E-31 230.3 31.1 300 36-464 36-442 (741)
136 1ri6_A Putative isomerase YBHE 100.0 8.1E-26 2.8E-30 204.0 29.9 306 1-460 1-336 (343)
137 3u4y_A Uncharacterized protein 100.0 5.3E-25 1.8E-29 197.5 33.5 292 5-458 10-326 (331)
138 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-24 4.5E-29 200.2 32.8 250 5-418 143-410 (415)
139 3vgz_A Uncharacterized protein 99.9 6.9E-24 2.4E-28 192.1 33.0 277 35-427 39-335 (353)
140 2ojh_A Uncharacterized protein 99.9 1E-24 3.5E-29 192.4 25.5 268 10-427 17-293 (297)
141 2z3z_A Dipeptidyl aminopeptida 99.9 2.8E-24 9.7E-29 213.1 30.1 218 242-464 121-418 (706)
142 1pby_B Quinohemoprotein amine 99.9 2.4E-24 8.2E-29 193.8 26.0 276 6-406 2-322 (337)
143 2ojh_A Uncharacterized protein 99.9 1.8E-23 6.2E-28 184.4 24.5 243 215-465 19-290 (297)
144 3vgz_A Uncharacterized protein 99.9 2.2E-22 7.6E-27 182.2 30.8 219 244-466 91-333 (353)
145 3hfq_A Uncharacterized protein 99.9 3.1E-22 1.1E-26 180.7 30.8 290 7-440 4-323 (347)
146 1z68_A Fibroblast activation p 99.9 2.4E-23 8.1E-28 206.9 25.0 312 4-464 26-427 (719)
147 1xfd_A DIP, dipeptidyl aminope 99.9 1.1E-23 3.7E-28 209.7 22.0 305 38-464 18-377 (723)
148 3scy_A Hypothetical bacterial 99.9 1.2E-21 4E-26 177.9 32.5 307 6-455 14-360 (361)
149 1pby_B Quinohemoprotein amine 99.9 3.5E-22 1.2E-26 179.7 25.4 262 210-486 3-312 (337)
150 3u4y_A Uncharacterized protein 99.9 1.5E-21 5E-26 175.1 28.6 245 211-463 13-289 (331)
151 3o4h_A Acylamino-acid-releasin 99.9 2.6E-21 8.9E-26 187.2 32.0 181 244-436 112-315 (582)
152 1ri6_A Putative isomerase YBHE 99.9 9.7E-22 3.3E-26 177.2 26.8 188 243-463 85-293 (343)
153 1jmx_B Amine dehydrogenase; ox 99.9 1.2E-21 4.1E-26 177.1 27.4 108 2-115 8-135 (349)
154 4a5s_A Dipeptidyl peptidase 4 99.9 6E-21 2E-25 189.5 34.5 358 4-440 27-453 (740)
155 2oit_A Nucleoporin 214KDA; NH2 99.9 1.8E-20 6.2E-25 173.0 27.4 230 3-354 46-332 (434)
156 3hfq_A Uncharacterized protein 99.9 5.3E-20 1.8E-24 166.0 28.9 237 2-354 48-316 (347)
157 2oiz_A Aromatic amine dehydrog 99.9 3.5E-20 1.2E-24 167.0 27.5 213 243-459 109-360 (361)
158 3pe7_A Oligogalacturonate lyas 99.9 3.7E-20 1.3E-24 169.9 27.2 290 19-435 14-381 (388)
159 3o4h_A Acylamino-acid-releasin 99.9 9.4E-21 3.2E-25 183.3 23.4 258 2-355 30-315 (582)
160 3pe7_A Oligogalacturonate lyas 99.9 2.2E-20 7.7E-25 171.3 23.9 218 245-465 84-369 (388)
161 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.9E-19 6.5E-24 163.3 25.7 160 240-437 143-342 (365)
162 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-19 3.7E-24 167.9 24.1 224 15-357 23-280 (434)
163 4a5s_A Dipeptidyl peptidase 4 99.9 6.1E-19 2.1E-23 175.1 31.2 307 38-464 18-433 (740)
164 3scy_A Hypothetical bacterial 99.9 2.9E-18 9.8E-23 155.5 32.5 239 2-354 58-336 (361)
165 1z68_A Fibroblast activation p 99.9 1.6E-20 5.6E-25 186.5 18.4 267 41-464 20-373 (719)
166 2oiz_A Aromatic amine dehydrog 99.8 1.1E-18 3.7E-23 157.3 27.6 295 3-418 13-360 (361)
167 1jmx_B Amine dehydrogenase; ox 99.8 1.3E-18 4.3E-23 157.2 25.7 262 210-486 13-327 (349)
168 1qks_A Cytochrome CD1 nitrite 99.8 1.4E-16 4.8E-21 150.6 39.1 327 5-403 167-547 (567)
169 3c5m_A Oligogalacturonate lyas 99.8 2.2E-18 7.4E-23 158.6 22.3 330 18-440 13-388 (396)
170 1qks_A Cytochrome CD1 nitrite 99.8 2.2E-16 7.4E-21 149.3 35.3 222 243-464 241-520 (567)
171 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.9E-17 2.4E-21 146.4 26.5 252 210-464 4-327 (365)
172 1q7f_A NHL, brain tumor CG1071 99.8 9E-16 3.1E-20 134.1 31.6 243 33-439 26-283 (286)
173 3azo_A Aminopeptidase; POP fam 99.8 1.5E-16 5E-21 156.6 28.8 195 241-441 129-374 (662)
174 2gop_A Trilobed protease; beta 99.8 1.5E-16 5.1E-21 143.4 26.1 282 4-443 23-337 (347)
175 3c5m_A Oligogalacturonate lyas 99.8 1.2E-16 4.1E-21 146.9 25.3 214 209-465 93-369 (396)
176 2xdw_A Prolyl endopeptidase; a 99.8 1.4E-15 4.8E-20 150.4 32.4 292 4-438 82-416 (710)
177 2bkl_A Prolyl endopeptidase; m 99.8 1.3E-15 4.3E-20 150.2 31.8 288 3-440 77-401 (695)
178 3azo_A Aminopeptidase; POP fam 99.8 1.4E-16 4.7E-21 156.8 24.7 260 12-356 44-370 (662)
179 3sjl_D Methylamine dehydrogena 99.7 1.9E-14 6.4E-19 127.5 32.6 296 86-457 38-384 (386)
180 3fvz_A Peptidyl-glycine alpha- 99.7 4.9E-15 1.7E-19 132.0 27.4 216 216-437 67-323 (329)
181 2gop_A Trilobed protease; beta 99.7 1.6E-15 5.6E-20 136.6 24.6 169 244-456 106-311 (347)
182 3dsm_A Uncharacterized protein 99.7 2.7E-14 9.1E-19 127.0 28.7 259 13-354 15-301 (328)
183 3fvz_A Peptidyl-glycine alpha- 99.7 9.9E-15 3.4E-19 130.0 25.4 241 2-313 32-322 (329)
184 2dg1_A DRP35, lactonase; beta 99.7 2.1E-14 7.1E-19 128.5 27.4 221 240-465 43-298 (333)
185 1yr2_A Prolyl oligopeptidase; 99.7 4E-14 1.4E-18 140.5 31.9 290 4-440 117-445 (741)
186 2dg1_A DRP35, lactonase; beta 99.7 1.5E-14 5.2E-19 129.4 26.3 259 38-427 7-301 (333)
187 1q7f_A NHL, brain tumor CG1071 99.7 4.1E-14 1.4E-18 123.6 28.2 227 3-356 39-281 (286)
188 3dsm_A Uncharacterized protein 99.7 1.2E-14 4.2E-19 129.1 24.7 238 207-456 52-321 (328)
189 2xdw_A Prolyl endopeptidase; a 99.7 7.2E-14 2.5E-18 138.2 31.3 185 244-464 173-397 (710)
190 2z2n_A Virginiamycin B lyase; 99.7 9.6E-13 3.3E-17 115.7 34.8 268 4-438 25-297 (299)
191 2mad_H Methylamine dehydrogena 99.7 1.3E-12 4.4E-17 117.6 36.0 221 217-442 96-356 (373)
192 3sjl_D Methylamine dehydrogena 99.7 2.5E-13 8.5E-18 120.3 30.1 272 3-356 42-364 (386)
193 3c75_H MADH, methylamine dehyd 99.6 5.9E-13 2E-17 120.2 30.8 238 216-457 147-423 (426)
194 3e5z_A Putative gluconolactona 99.6 3.8E-13 1.3E-17 118.0 28.4 241 30-358 21-289 (296)
195 2bkl_A Prolyl endopeptidase; m 99.6 2E-14 6.8E-19 141.7 20.7 232 2-357 129-399 (695)
196 3e5z_A Putative gluconolactona 99.6 1.1E-12 3.7E-17 115.1 29.3 189 240-439 67-289 (296)
197 2mad_H Methylamine dehydrogena 99.6 4E-12 1.4E-16 114.4 33.0 272 3-401 30-357 (373)
198 2z2n_A Virginiamycin B lyase; 99.6 1.5E-11 5.2E-16 108.0 34.7 262 34-461 12-280 (299)
199 3no2_A Uncharacterized protein 99.6 1.3E-12 4.4E-17 112.5 25.7 217 4-300 4-230 (276)
200 3no2_A Uncharacterized protein 99.6 1.8E-12 6.1E-17 111.6 26.3 206 208-424 4-231 (276)
201 1rwi_B Serine/threonine-protei 99.6 1.1E-12 3.8E-17 113.4 25.3 230 3-357 33-266 (270)
202 1rwi_B Serine/threonine-protei 99.6 1.6E-12 5.5E-17 112.4 25.5 233 200-440 25-268 (270)
203 2qc5_A Streptogramin B lactona 99.6 2.1E-11 7.3E-16 107.0 32.8 264 4-434 30-298 (300)
204 1yr2_A Prolyl oligopeptidase; 99.6 1.9E-12 6.4E-17 128.6 27.8 181 245-463 212-423 (741)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.3E-11 4.5E-16 109.2 28.7 245 4-356 28-300 (314)
206 2qc5_A Streptogramin B lactona 99.5 2.5E-10 8.7E-15 100.1 34.5 262 35-461 18-286 (300)
207 3c75_H MADH, methylamine dehyd 99.5 2E-11 6.9E-16 110.2 27.1 271 46-401 82-409 (426)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 3.4E-11 1.2E-15 106.6 28.0 153 243-437 118-300 (314)
209 1mda_H Methylamine dehydrogena 99.5 1.8E-11 6.1E-16 108.8 23.4 229 217-456 95-366 (368)
210 3iuj_A Prolyl endopeptidase; h 99.5 2.7E-11 9.1E-16 119.1 26.3 181 218-440 208-409 (693)
211 1mda_H Methylamine dehydrogena 99.4 1.3E-11 4.3E-16 109.8 19.6 269 16-415 47-366 (368)
212 3g4e_A Regucalcin; six bladed 99.4 3.8E-10 1.3E-14 98.7 28.9 220 240-465 11-260 (297)
213 3q7m_A Lipoprotein YFGL, BAMB; 99.4 9.4E-10 3.2E-14 99.9 31.9 214 208-433 143-375 (376)
214 3g4e_A Regucalcin; six bladed 99.4 1.7E-10 5.8E-15 100.9 25.8 225 4-344 24-260 (297)
215 1yiq_A Quinohemoprotein alcoho 99.4 2.3E-10 8E-15 111.6 29.1 241 217-463 182-534 (689)
216 2qe8_A Uncharacterized protein 99.4 9.3E-11 3.2E-15 104.9 24.0 174 242-432 120-317 (343)
217 1xip_A Nucleoporin NUP159; bet 99.4 2.1E-11 7.3E-16 108.5 18.6 171 38-299 39-230 (388)
218 1kb0_A Quinohemoprotein alcoho 99.4 5.8E-10 2E-14 108.6 30.2 203 217-422 189-536 (677)
219 3q7m_A Lipoprotein YFGL, BAMB; 99.4 2.8E-09 9.7E-14 96.7 32.7 304 4-391 52-375 (376)
220 3hrp_A Uncharacterized protein 99.4 7.7E-10 2.6E-14 101.0 28.6 235 37-353 131-408 (409)
221 1xip_A Nucleoporin NUP159; bet 99.4 1.4E-11 4.8E-16 109.6 16.6 170 242-423 38-231 (388)
222 3hxj_A Pyrrolo-quinoline quino 99.4 2.1E-10 7.3E-15 102.2 24.4 294 6-438 31-326 (330)
223 2ghs_A AGR_C_1268P; regucalcin 99.4 8.7E-10 3E-14 97.8 27.7 216 5-344 61-290 (326)
224 3hrp_A Uncharacterized protein 99.4 2.2E-09 7.6E-14 98.0 29.7 198 209-435 183-409 (409)
225 2ghs_A AGR_C_1268P; regucalcin 99.3 9.5E-10 3.3E-14 97.5 26.2 213 243-464 50-289 (326)
226 1kb0_A Quinohemoprotein alcoho 99.3 8.1E-10 2.8E-14 107.6 27.1 254 207-463 127-536 (677)
227 3iuj_A Prolyl endopeptidase; h 99.3 4.3E-10 1.5E-14 110.5 24.1 221 240-464 127-388 (693)
228 2ece_A 462AA long hypothetical 99.3 2.1E-09 7.2E-14 95.9 24.4 244 219-466 44-400 (462)
229 3dr2_A Exported gluconolactona 99.3 2.6E-09 8.8E-14 93.8 24.5 76 30-113 38-115 (305)
230 1npe_A Nidogen, entactin; glyc 99.3 3E-08 1E-12 85.1 30.3 250 5-338 1-263 (267)
231 1yiq_A Quinohemoprotein alcoho 99.3 2.8E-09 9.6E-14 104.0 26.0 274 4-342 120-534 (689)
232 4a2l_A BT_4663, two-component 99.2 1.5E-06 5.2E-11 87.1 46.0 373 4-461 183-600 (795)
233 3dr2_A Exported gluconolactona 99.2 2.1E-09 7E-14 94.5 22.2 215 240-463 43-293 (305)
234 1fwx_A Nitrous oxide reductase 99.2 1.5E-09 5.3E-14 100.3 21.8 227 209-440 102-435 (595)
235 2qe8_A Uncharacterized protein 99.2 1.1E-09 3.6E-14 98.0 19.3 252 3-345 26-310 (343)
236 4a2l_A BT_4663, two-component 99.2 1.4E-06 4.8E-11 87.3 43.4 372 4-461 141-557 (795)
237 1npe_A Nidogen, entactin; glyc 99.2 1.1E-07 3.6E-12 81.7 29.2 236 217-461 9-265 (267)
238 2ece_A 462AA long hypothetical 99.2 5.1E-08 1.7E-12 87.1 27.0 128 216-344 226-399 (462)
239 2hz6_A Endoplasmic reticulum t 99.2 6.9E-11 2.4E-15 106.5 8.5 216 207-438 8-238 (369)
240 3hxj_A Pyrrolo-quinoline quino 99.1 3.5E-09 1.2E-13 94.3 17.8 201 208-461 107-309 (330)
241 2hz6_A Endoplasmic reticulum t 99.1 1.7E-11 5.7E-16 110.6 2.1 198 252-458 8-215 (369)
242 1kv9_A Type II quinohemoprotei 99.1 1.6E-07 5.3E-12 91.5 29.6 239 217-460 177-514 (668)
243 3v9f_A Two-component system se 99.1 7.4E-06 2.5E-10 81.9 41.6 381 4-460 173-596 (781)
244 1fwx_A Nitrous oxide reductase 99.1 2.5E-08 8.6E-13 92.3 21.5 252 211-466 18-407 (595)
245 2ad6_A Methanol dehydrogenase 99.0 3.9E-07 1.3E-11 86.9 29.5 246 209-462 161-522 (571)
246 3v9f_A Two-component system se 99.0 1.4E-05 4.7E-10 80.0 40.8 376 4-461 76-509 (781)
247 2iwa_A Glutamine cyclotransfer 99.0 3.8E-07 1.3E-11 76.4 24.4 194 201-438 23-239 (266)
248 1w6s_A Methanol dehydrogenase 99.0 4.5E-06 1.5E-10 79.5 33.6 238 217-463 181-532 (599)
249 2iwa_A Glutamine cyclotransfer 99.0 6.9E-07 2.3E-11 74.9 24.2 194 83-356 23-238 (266)
250 3s94_A LRP-6, low-density lipo 98.9 4.4E-05 1.5E-09 73.3 42.3 369 13-461 16-449 (619)
251 3nol_A Glutamine cyclotransfer 98.9 1.1E-06 3.6E-11 72.8 22.5 153 197-356 41-202 (262)
252 3nol_A Glutamine cyclotransfer 98.9 1.4E-06 4.7E-11 72.1 23.2 130 208-345 96-244 (262)
253 3mbr_X Glutamine cyclotransfer 98.9 3.2E-06 1.1E-10 69.3 24.9 155 195-356 17-180 (243)
254 1flg_A Protein (quinoprotein e 98.8 2.2E-05 7.5E-10 74.9 33.2 252 208-463 117-545 (582)
255 3v64_C Agrin; beta propeller, 98.8 3.4E-05 1.2E-09 68.6 32.4 225 209-440 44-279 (349)
256 1kv9_A Type II quinohemoprotei 98.8 1.2E-06 4.1E-11 85.3 24.6 81 263-344 437-520 (668)
257 3nok_A Glutaminyl cyclase; bet 98.8 2.3E-06 7.9E-11 70.7 22.1 130 207-344 104-253 (268)
258 3mbr_X Glutamine cyclotransfer 98.8 4.2E-06 1.4E-10 68.6 23.4 130 208-345 74-223 (243)
259 3v65_B Low-density lipoprotein 98.8 1.6E-05 5.3E-10 71.9 29.8 225 209-440 87-322 (386)
260 3s94_A LRP-6, low-density lipo 98.8 0.00014 4.7E-09 69.9 43.4 422 2-439 92-554 (619)
261 3nok_A Glutaminyl cyclase; bet 98.8 1.3E-06 4.4E-11 72.2 19.2 174 287-466 57-254 (268)
262 2ad6_A Methanol dehydrogenase 98.7 2.7E-06 9.2E-11 81.1 23.1 134 211-344 319-525 (571)
263 1flg_A Protein (quinoprotein e 98.7 1.4E-05 4.9E-10 76.1 27.9 176 246-423 250-547 (582)
264 2xe4_A Oligopeptidase B; hydro 98.7 1.4E-05 4.9E-10 79.1 28.8 62 34-100 170-240 (751)
265 1ijq_A LDL receptor, low-densi 98.7 0.0001 3.5E-09 64.6 30.6 222 211-440 3-242 (316)
266 2p4o_A Hypothetical protein; p 98.7 6.9E-05 2.4E-09 65.4 28.2 217 242-465 32-276 (306)
267 3ei3_A DNA damage-binding prot 98.6 0.00069 2.4E-08 69.8 41.5 221 209-437 707-1000(1158)
268 1k3i_A Galactose oxidase precu 98.6 1.1E-05 3.6E-10 78.9 24.9 112 4-117 197-326 (656)
269 2xe4_A Oligopeptidase B; hydro 98.6 4.4E-06 1.5E-10 82.7 22.4 109 3-115 184-305 (751)
270 1w6s_A Methanol dehydrogenase 98.6 1.2E-05 4.1E-10 76.6 23.9 192 208-402 62-350 (599)
271 2p4o_A Hypothetical protein; p 98.6 0.00013 4.4E-09 63.7 29.0 217 201-427 34-279 (306)
272 3sov_A LRP-6, low-density lipo 98.6 0.00019 6.4E-09 62.7 29.8 223 14-315 12-240 (318)
273 3p5b_L Low density lipoprotein 98.6 0.00032 1.1E-08 63.6 31.9 226 209-441 83-325 (400)
274 3v65_B Low-density lipoprotein 98.6 9.3E-05 3.2E-09 66.8 28.0 221 14-315 95-320 (386)
275 1k3i_A Galactose oxidase precu 98.6 1.2E-05 4.1E-10 78.4 23.3 176 246-425 291-530 (656)
276 3v64_C Agrin; beta propeller, 98.6 0.0003 1E-08 62.5 29.7 221 14-315 52-277 (349)
277 4a0p_A LRP6, LRP-6, low-densit 98.5 0.00083 2.8E-08 64.6 49.1 103 7-115 8-112 (628)
278 3sov_A LRP-6, low-density lipo 98.5 0.00034 1.2E-08 61.1 27.7 224 210-440 5-242 (318)
279 2fp8_A Strictosidine synthase; 98.5 5.1E-05 1.7E-09 66.9 22.2 193 242-440 19-272 (322)
280 2fp8_A Strictosidine synthase; 98.5 0.00018 6.3E-09 63.3 25.7 221 211-437 33-314 (322)
281 1ijq_A LDL receptor, low-densi 98.4 0.00064 2.2E-08 59.5 30.9 228 7-315 3-240 (316)
282 2xbg_A YCF48-like protein; pho 98.4 0.00096 3.3E-08 58.7 32.1 135 208-348 132-272 (327)
283 3p5b_L Low density lipoprotein 98.4 0.0012 4.1E-08 59.8 33.0 230 7-315 85-322 (400)
284 3tc9_A Hypothetical hydrolase; 98.4 0.00018 6.1E-09 65.9 23.8 217 209-435 150-429 (430)
285 4a0p_A LRP6, LRP-6, low-densit 98.4 0.0022 7.5E-08 61.7 47.3 419 2-440 88-553 (628)
286 4hw6_A Hypothetical protein, I 98.3 0.00036 1.2E-08 63.9 25.0 222 203-435 143-432 (433)
287 3qqz_A Putative uncharacterize 98.3 0.00033 1.1E-08 58.4 21.8 79 31-115 21-101 (255)
288 3qqz_A Putative uncharacterize 98.3 0.0013 4.3E-08 54.8 27.6 194 235-433 21-250 (255)
289 3m0c_C LDL receptor, low-densi 98.2 0.0037 1.3E-07 61.6 31.2 224 14-315 403-634 (791)
290 3m0c_C LDL receptor, low-densi 98.2 0.0039 1.3E-07 61.4 31.3 225 209-440 395-636 (791)
291 3tc9_A Hypothetical hydrolase; 98.2 0.0018 6.2E-08 59.3 27.4 62 209-272 238-300 (430)
292 2xzh_A Clathrin heavy chain 1; 98.1 0.0037 1.3E-07 53.1 30.1 168 243-440 153-336 (365)
293 3kya_A Putative phosphatase; s 98.0 0.006 2E-07 56.1 25.9 62 209-272 259-340 (496)
294 2xbg_A YCF48-like protein; pho 98.0 0.006 2.1E-07 53.6 31.4 139 209-353 174-320 (327)
295 1n7d_A LDL receptor, low-densi 98.0 2.1E-05 7.2E-10 76.8 10.4 224 211-441 379-619 (699)
296 3kya_A Putative phosphatase; s 98.0 0.0087 3E-07 55.0 25.9 227 209-440 152-479 (496)
297 1n7d_A LDL receptor, low-densi 97.9 0.00017 5.9E-09 70.5 14.4 221 14-314 385-615 (699)
298 4hw6_A Hypothetical protein, I 97.9 0.015 5.2E-07 53.1 28.4 62 209-272 240-303 (433)
299 3amr_A 3-phytase; beta-propell 97.9 0.0037 1.3E-07 54.2 20.3 183 252-440 39-268 (355)
300 1bpo_A Protein (clathrin); cla 97.7 0.02 7E-07 50.8 30.3 228 204-442 30-295 (494)
301 2ism_A Putative oxidoreductase 97.7 0.013 4.5E-07 51.9 22.1 218 242-463 31-331 (352)
302 1bpo_A Protein (clathrin); cla 97.7 0.025 8.6E-07 50.3 31.6 166 243-440 152-335 (494)
303 3amr_A 3-phytase; beta-propell 97.7 0.014 4.9E-07 50.6 21.1 193 7-280 42-271 (355)
304 2xzh_A Clathrin heavy chain 1; 97.7 0.021 7.3E-07 48.6 27.3 239 1-314 74-333 (365)
305 3s25_A Hypothetical 7-bladed b 97.6 0.028 9.4E-07 48.4 23.3 233 207-465 24-280 (302)
306 3pbp_A Nucleoporin NUP82; beta 97.6 0.0047 1.6E-07 54.7 16.9 106 4-114 31-158 (452)
307 2vpj_A Kelch-like protein 12; 97.6 0.013 4.4E-07 50.7 19.9 211 218-438 31-280 (301)
308 2ism_A Putative oxidoreductase 97.6 0.037 1.3E-06 49.0 24.8 75 38-115 32-115 (352)
309 2vpj_A Kelch-like protein 12; 97.6 0.033 1.1E-06 48.1 22.6 93 218-314 175-279 (301)
310 2p9w_A MAL S 1 allergenic prot 97.5 0.038 1.3E-06 47.5 21.1 65 209-274 149-216 (334)
311 3ii7_A Kelch-like protein 7; p 97.5 0.024 8E-07 49.2 20.5 214 217-440 23-276 (306)
312 3a9g_A Putative uncharacterize 97.5 0.05 1.7E-06 48.2 24.6 75 37-114 29-114 (354)
313 3ei3_A DNA damage-binding prot 97.5 0.14 4.9E-06 52.9 39.2 216 201-424 516-755 (1158)
314 3sre_A PON1, serum paraoxonase 97.4 0.052 1.8E-06 47.7 23.8 186 244-434 52-296 (355)
315 2p9w_A MAL S 1 allergenic prot 97.4 0.014 4.9E-07 50.1 17.3 152 200-355 14-215 (334)
316 2xn4_A Kelch-like protein 2; s 97.4 0.041 1.4E-06 47.5 20.4 212 218-439 30-279 (302)
317 1xi4_A Clathrin heavy chain; a 97.3 0.03 1E-06 57.7 20.9 229 202-441 28-294 (1630)
318 4asc_A Kelch repeat and BTB do 97.3 0.044 1.5E-06 47.7 20.1 216 218-440 13-281 (315)
319 1zgk_A Kelch-like ECH-associat 97.2 0.061 2.1E-06 46.6 19.8 212 218-439 39-290 (308)
320 3a9g_A Putative uncharacterize 97.1 0.11 3.8E-06 45.9 20.7 218 242-463 29-328 (354)
321 4asc_A Kelch repeat and BTB do 97.1 0.11 3.9E-06 45.1 24.0 94 218-314 165-278 (315)
322 3ii7_A Kelch-like protein 7; p 97.1 0.12 4.1E-06 44.7 24.0 94 217-314 168-273 (306)
323 1zgk_A Kelch-like ECH-associat 97.1 0.12 4.1E-06 44.7 20.8 93 218-314 184-288 (308)
324 2xn4_A Kelch-like protein 2; s 96.9 0.17 5.6E-06 43.7 23.1 93 218-314 173-277 (302)
325 3pbp_A Nucleoporin NUP82; beta 96.9 0.14 4.9E-06 45.5 18.4 143 208-352 31-209 (452)
326 1xi4_A Clathrin heavy chain; a 96.8 0.25 8.7E-06 51.2 22.1 88 14-114 47-134 (1630)
327 2uvk_A YJHT; unknown function, 96.8 0.27 9.2E-06 43.6 20.4 226 208-441 19-347 (357)
328 3s25_A Hypothetical 7-bladed b 96.7 0.25 8.4E-06 42.5 27.0 123 217-355 128-255 (302)
329 2woz_A Kelch repeat and BTB do 96.7 0.28 9.4E-06 42.6 21.7 94 218-314 175-288 (318)
330 2woz_A Kelch repeat and BTB do 96.7 0.28 9.5E-06 42.6 20.2 213 218-439 24-290 (318)
331 3das_A Putative oxidoreductase 96.6 0.31 1.1E-05 42.6 27.3 77 37-114 32-116 (347)
332 2uvk_A YJHT; unknown function, 96.4 0.46 1.6E-05 42.0 20.6 51 265-315 286-344 (357)
333 2be1_A Serine/threonine-protei 96.3 0.22 7.6E-06 43.3 15.7 184 209-399 11-236 (339)
334 2zwa_A Leucine carboxyl methyl 96.1 1 3.5E-05 44.0 21.4 178 218-398 412-639 (695)
335 2g8s_A Glucose/sorbosone dehyd 95.9 0.85 2.9E-05 40.2 27.5 61 38-99 19-87 (353)
336 3sbq_A Nitrous-oxide reductase 95.7 1.3 4.3E-05 41.1 25.6 94 328-424 325-453 (638)
337 3sre_A PON1, serum paraoxonase 95.5 1.1 3.9E-05 39.2 23.5 107 241-352 164-295 (355)
338 3ott_A Two-component system se 95.1 3 0.0001 41.3 39.0 209 210-435 204-447 (758)
339 1tl2_A L10, protein (tachylect 94.7 0.34 1.2E-05 38.8 10.0 102 243-351 42-159 (236)
340 1tl2_A L10, protein (tachylect 94.5 1.5 5.3E-05 35.1 17.2 131 327-464 42-199 (236)
341 2be1_A Serine/threonine-protei 94.4 0.18 6.1E-06 43.9 8.8 146 210-357 57-233 (339)
342 3ott_A Two-component system se 93.4 6.7 0.00023 38.8 42.2 224 208-440 242-506 (758)
343 3qhy_B Beta-lactamase inhibito 93.4 3.2 0.00011 35.1 20.4 221 202-440 27-250 (282)
344 3sbq_A Nitrous-oxide reductase 93.1 0.93 3.2E-05 42.0 11.0 93 17-114 300-408 (638)
345 2g8s_A Glucose/sorbosone dehyd 92.9 4.5 0.00016 35.5 25.2 59 372-434 288-350 (353)
346 2zwa_A Leucine carboxyl methyl 92.1 9.5 0.00032 37.3 20.5 111 4-117 397-525 (695)
347 3das_A Putative oxidoreductase 91.9 6 0.00021 34.5 26.0 221 240-465 30-326 (347)
348 1cru_A Protein (soluble quinop 90.6 10 0.00035 34.7 21.5 103 242-345 27-163 (454)
349 3q6k_A 43.2 kDa salivary prote 88.8 12 0.00041 33.1 18.0 64 217-280 122-197 (381)
350 1cru_A Protein (soluble quinop 87.3 17 0.00059 33.2 29.7 57 203-259 31-97 (454)
351 3qhy_B Beta-lactamase inhibito 85.1 16 0.00055 30.7 22.8 140 204-355 107-246 (282)
352 4hvt_A Ritya.17583.B, post-pro 82.6 38 0.0013 33.1 20.9 219 244-463 131-412 (711)
353 4gq2_M Nucleoporin NUP120; bet 73.7 83 0.0028 32.1 15.9 39 82-123 237-275 (950)
354 3mvd_K Regulator of chromosome 71.9 56 0.0019 29.3 28.2 225 202-438 78-376 (423)
355 3mez_B Mannose-specific lectin 71.7 23 0.00078 24.7 8.9 61 5-66 24-84 (113)
356 3zwu_A Alkaline phosphatase PH 68.1 23 0.00078 33.5 8.9 56 368-423 482-548 (592)
357 3kci_A Probable E3 ubiquitin-p 68.0 65 0.0022 28.5 30.7 151 203-355 163-345 (389)
358 4hvt_A Ritya.17583.B, post-pro 67.3 97 0.0033 30.3 21.6 67 1-67 137-226 (711)
359 2wg3_C Hedgehog-interacting pr 67.1 76 0.0026 29.0 13.4 27 328-354 16-44 (463)
360 4gq2_M Nucleoporin NUP120; bet 66.4 50 0.0017 33.6 11.6 38 242-280 236-273 (950)
361 3mez_B Mannose-specific lectin 63.7 34 0.0012 23.8 8.7 25 330-355 60-84 (113)
362 4a9v_A PHOX; hydrolase, beta-p 59.9 44 0.0015 31.4 8.9 57 368-424 482-549 (592)
363 4fhn_B Nucleoporin NUP120; pro 57.1 56 0.0019 34.2 10.3 36 244-280 240-275 (1139)
364 3kci_A Probable E3 ubiquitin-p 55.3 1.1E+02 0.0038 27.0 28.6 230 204-439 58-348 (389)
365 3mez_A Mannose-specific lectin 55.3 45 0.0016 23.1 6.6 24 41-64 53-76 (111)
366 4fhn_B Nucleoporin NUP120; pro 51.9 14 0.00047 38.6 4.8 40 82-124 239-278 (1139)
367 3f7f_A Nucleoporin NUP120; nuc 48.1 1.4E+02 0.0048 29.0 10.4 36 243-281 223-258 (729)
368 3f7f_A Nucleoporin NUP120; nuc 46.0 32 0.0011 33.3 5.8 37 82-123 223-259 (729)
369 3zwu_A Alkaline phosphatase PH 41.1 91 0.0031 29.6 8.0 39 219-259 510-548 (592)
370 4a9v_A PHOX; hydrolase, beta-p 38.5 1.4E+02 0.0047 28.2 8.6 39 219-259 510-548 (592)
371 3mez_A Mannose-specific lectin 37.2 1E+02 0.0034 21.3 6.5 23 330-352 53-75 (111)
372 3q6k_A 43.2 kDa salivary prote 33.8 2.5E+02 0.0085 24.8 22.1 82 37-121 87-197 (381)
373 3b7f_A Glycosyl hydrolase, BNR 27.3 3.1E+02 0.011 23.9 26.7 50 7-57 24-77 (394)
374 2dpf_A Curculin; sweet taste, 26.1 1.6E+02 0.0056 20.3 8.7 24 41-65 54-77 (115)
375 2wg3_C Hedgehog-interacting pr 25.9 3.8E+02 0.013 24.4 26.9 54 38-91 15-79 (463)
376 3dzw_A Agglutinin; lectin, man 24.4 1.7E+02 0.0059 19.9 9.4 24 330-354 53-76 (109)
377 1q47_A Semaphorin 3A; beta pro 23.8 2.1E+02 0.007 26.4 7.2 62 370-431 416-487 (495)
378 3b7f_A Glycosyl hydrolase, BNR 23.0 3.8E+02 0.013 23.4 16.9 96 209-309 23-143 (394)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.5e-55 Score=424.82 Aligned_cols=392 Identities=16% Similarity=0.214 Sum_probs=310.6
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+.||++||+++ ++.|+|||+.+++ ....+.+|...|++++|+|+|++||+|+ |++|+|||+.+++. .....+.+|.
T Consensus 27 spdg~~l~~~~-~~~v~l~~~~~~~-~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~-~~~~~~~~~~ 103 (611)
T 1nr0_A 27 TPAGDKIQYCN-GTSVYTVPVGSLT-DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH-ILKTTIPVFS 103 (611)
T ss_dssp CTTSSEEEEEE-TTEEEEEETTCSS-CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC-CEEEEEECSS
T ss_pred CCCCCEEEeCC-CCEEEEecCCCcc-cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc-eeeEeecccC
Confidence 45899999987 6799999998776 4467899999999999999999999998 99999999975432 2334567899
Q ss_pred cceeEEEEecCCCeEEeeeCCc-ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGI-CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
++|.+++|+|+++.|++++... .++.|++|| .++....+.++...+
T Consensus 104 ~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v------------------------------- 150 (611)
T 1nr0_A 104 GPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAM------------------------------- 150 (611)
T ss_dssp SCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCE-------------------------------
T ss_pred CceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCc-------------------------------
Confidence 9999999999999888877520 014677777 455444444443322
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCC---cEEEEECCCeEEEEECCCCceEEEEec
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH---DTLAVALDTSVYTWNTKTNKTQLLVEY 236 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~v~iw~~~~~~~~~~~~~ 236 (488)
..+.|+++ .+++++.|+.|++||..+++....+
T Consensus 151 ------------------------------------------~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-- 186 (611)
T 1nr0_A 151 ------------------------------------------NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-- 186 (611)
T ss_dssp ------------------------------------------EEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE--
T ss_pred ------------------------------------------eEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee--
Confidence 23334332 4788889999999999888765554
Q ss_pred CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-------cccccEEEEEe--cCCEEEEeecCCeEE
Q psy14511 237 PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-------THMHQVIAMCW--NGNLLSCGTIGGNIL 307 (488)
Q Consensus 237 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~--~~~~l~~~~~dg~i~ 307 (488)
.+ |...|.+++|+|++++|+++ +.|++|++||+.+++.+..+. +|...|.+++| ++++|++++.|+.|+
T Consensus 187 ~~-H~~~V~~v~fspdg~~las~-s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~ 264 (611)
T 1nr0_A 187 GE-HTKFVHSVRYNPDGSLFAST-GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK 264 (611)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cc-ccCceEEEEECCCCCEEEEE-ECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 44 89999999999999999999 999999999999988888774 79999999999 789999999999999
Q ss_pred EEECcCCCc------------------------------------------cceeeecCCccEEEEEEccCCcEEEEEe-
Q psy14511 308 HYDVRTHSD------------------------------------------YPTAITREGDVVCGLKWSPNGRYLASGS- 344 (488)
Q Consensus 308 i~d~~~~~~------------------------------------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 344 (488)
+||+++++. ....+.+|...|.+++|+|+|++|++++
T Consensus 265 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~ 344 (611)
T 1nr0_A 265 IWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA 344 (611)
T ss_dssp EEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 999986431 1123457889999999999999999999
Q ss_pred cCeEEEEECCCCCCCccc--------------------------------------------------------------
Q psy14511 345 NNTVKIWDFRQLDAKRPL-------------------------------------------------------------- 362 (488)
Q Consensus 345 d~~i~iwd~~~~~~~~~~-------------------------------------------------------------- 362 (488)
|+.|++||+.+++....+
T Consensus 345 D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 424 (611)
T 1nr0_A 345 EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD 424 (611)
T ss_dssp TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSS
T ss_pred CCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCc
Confidence 699999998764321110
Q ss_pred -------------------------ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcce--eEEEeeccccEEEEEEcC
Q psy14511 363 -------------------------GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHL--IEELKIHQERILSAVLSP 415 (488)
Q Consensus 363 -------------------------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~ 415 (488)
.....+|+|+|+++++ |+.|++|++||+.+++. +.. .+|...|++++|+|
T Consensus 425 ~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~las--gs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fsp 501 (611)
T 1nr0_A 425 IAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAV--GGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSN 501 (611)
T ss_dssp CEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEE--EETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECT
T ss_pred EEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEE--eCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECC
Confidence 0001278999999999 78999999999987643 334 67999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCC-CCccc--cc-cccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeecc
Q psy14511 416 DQTCVAAASADETISIWNCFP-RDKKR--KA-RQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFG 485 (488)
Q Consensus 416 ~~~~l~t~~~dg~v~iw~~~~-~~~~~--~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g 485 (488)
|+++|++++.|+.|++|++.+ ++... .. .|...|.+++|+|+++.++ .++.|..+.+|..++|
T Consensus 502 dg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~la-------sgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 502 NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA-------TGSLDNSVIVWNMNKP 568 (611)
T ss_dssp TSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEE-------EEETTSCEEEEETTCT
T ss_pred CCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEE-------EEECCCcEEEEECCCc
Confidence 999999999999999999987 54432 22 3899999999999998873 3445556666665544
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4e-54 Score=418.15 Aligned_cols=393 Identities=16% Similarity=0.225 Sum_probs=308.0
Q ss_pred CccCCceEEEeecCCeEEEEEcccCcc-cceeecccCceEEEEEEccCCcEEEEec-C----CeEEEEeccccCcCCCcc
Q psy14511 1 MCWNGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N----NTVKIWDFRQLDAKRPQV 74 (488)
Q Consensus 1 ~~~dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp~g~~las~~-d----~~i~vwd~~~~~~~~~~~ 74 (488)
+++||++||+|+.||+|+|||+.+++. ....+.+|.++|.+++|+|+|++||+++ + +.|++||... ...
T Consensus 67 ~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~-----~~~ 141 (611)
T 1nr0_A 67 TSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT-----SNG 141 (611)
T ss_dssp ECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC-----BCB
T ss_pred ECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC-----Ccc
Confidence 356999999999999999999976543 3346789999999999999999999887 3 4788888432 344
Q ss_pred cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511 75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID 154 (488)
Q Consensus 75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (488)
.+.+|...|.+++|+|++++++++++. |++|++||..+++....+..|...+..+.++++
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~--D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd------------------ 201 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSD--DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD------------------ 201 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEET--TSCEEEEETTTBEEEEEECCCSSCEEEEEECTT------------------
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeC--CCeEEEEECCCCeEeeeeccccCceEEEEECCC------------------
Confidence 578899999999999999864555553 999999999888877777666544433333322
Q ss_pred ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511 155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV 234 (488)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~ 234 (488)
+..+++++.|+.|++||+.+++....+
T Consensus 202 -----------------------------------------------------g~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 202 -----------------------------------------------------GSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp -----------------------------------------------------SSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred -----------------------------------------------------CCEEEEEECCCcEEEEECCCCcEeeee
Confidence 245778889999999999998877665
Q ss_pred ecC-----CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-------------------------------
Q psy14511 235 EYP-----TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ------------------------------- 278 (488)
Q Consensus 235 ~~~-----~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~------------------------------- 278 (488)
... + |...|.+++|+|++++|+++ +.|++|++||+.+++.+.
T Consensus 229 ~~~~~~~~~-h~~~V~~v~~spdg~~l~s~-s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i 306 (611)
T 1nr0_A 229 EDDSLKNVA-HSGSVFGLTWSPDGTKIASA-SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 306 (611)
T ss_dssp BCTTSSSCS-SSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred ccccccccc-cCCCEEEEEECCCCCEEEEE-eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcE
Confidence 321 4 88999999999999999999 999999999998765543
Q ss_pred ------------eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcccee------------------------
Q psy14511 279 ------------KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA------------------------ 320 (488)
Q Consensus 279 ------------~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~------------------------ 320 (488)
.+.+|...|.+++| ++++|++++.|+.|++||+.++......
T Consensus 307 ~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~ 386 (611)
T 1nr0_A 307 NFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSW 386 (611)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEET
T ss_pred EEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEc
Confidence 33468889999999 7899999999999999998764210000
Q ss_pred ---------------------------------------------------------eecCCccEEEEEEccCCcEEEEE
Q psy14511 321 ---------------------------------------------------------ITREGDVVCGLKWSPNGRYLASG 343 (488)
Q Consensus 321 ---------------------------------------------------------~~~~~~~i~~~~~s~~~~~l~~~ 343 (488)
...|...+.+++|+|||++||++
T Consensus 387 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasg 466 (611)
T 1nr0_A 387 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG 466 (611)
T ss_dssp TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred CCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEe
Confidence 00123457889999999999999
Q ss_pred e-cCeEEEEECCCCCCC--ccc----ceeeeeecCCCCEEEEEccCCCCeEEEEeCCC-cceeEE--EeeccccEEEEEE
Q psy14511 344 S-NNTVKIWDFRQLDAK--RPL----GLIVPKLKREGRELVTSHGKQDCSLKMWEYPR-LHLIEE--LKIHQERILSAVL 413 (488)
Q Consensus 344 ~-d~~i~iwd~~~~~~~--~~~----~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~-~~~~~~--~~~~~~~v~~~~~ 413 (488)
+ |+.|++||+...... ... .....+|+|+|++|++ ++.|++|++||+.+ ++++.. +.+|...|++++|
T Consensus 467 s~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las--~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~f 544 (611)
T 1nr0_A 467 GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVA--TDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW 544 (611)
T ss_dssp ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEE
T ss_pred CCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEE--EcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEE
Confidence 9 699999999765321 110 1112299999999999 78999999999987 655543 3459999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCcc---ccccc-cCCcceEEeecCCCceEEEEeeecccccceeeEEEEee
Q psy14511 414 SPDQTCVAAASADETISIWNCFPRDKK---RKARQ-VGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTV 483 (488)
Q Consensus 414 s~~~~~l~t~~~dg~v~iw~~~~~~~~---~~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 483 (488)
+||+++||+++.|++|++|++.+++.. ....| ...|.+++|+|+++ + +.++.|..+.+|...
T Consensus 545 spdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l-------~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 545 SPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-I-------VSAGQDSNIKFWNVP 610 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-E-------EEEETTSCEEEEECC
T ss_pred CCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-E-------EEecCCCCEEEEecc
Confidence 999999999999999999999986532 34567 78999999999986 4 345677788888753
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.3e-52 Score=402.87 Aligned_cols=423 Identities=21% Similarity=0.328 Sum_probs=318.4
Q ss_pred CccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecccc------------
Q psy14511 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL------------ 67 (488)
Q Consensus 1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~------------ 67 (488)
++.||++||+|+.|++|+|||. +++ ....+.+|.+.|++++|+|||++||+++ |++|+|||....
T Consensus 24 ~spdg~~las~~~d~~v~iWd~-~~~-~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~~~~~~~~~~~~v 101 (577)
T 2ymu_A 24 FSPDGQTIASASDDKTVKLWNR-NGQ-LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSV 101 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECT-TSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCE
T ss_pred ECCCCCEEEEEeCCCEEEEEEC-CCC-EEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEECCCCCE
Confidence 3569999999999999999995 455 4467899999999999999999999998 999999996420
Q ss_pred --------------------------------------------------------------------------------
Q psy14511 68 -------------------------------------------------------------------------------- 67 (488)
Q Consensus 68 -------------------------------------------------------------------------------- 67 (488)
T Consensus 102 ~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (577)
T 2ymu_A 102 RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS 181 (577)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSS
T ss_pred EEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCc
Confidence
Q ss_pred ---------------------------CcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeee
Q psy14511 68 ---------------------------DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120 (488)
Q Consensus 68 ---------------------------~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 120 (488)
...+.+..+.+|...|.+++|+|+++++++.+. |+.|++||. +++.+..
T Consensus 182 ~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~---d~~i~~w~~-~~~~~~~ 257 (577)
T 2ymu_A 182 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD---DKTVKLWNR-NGQLLQT 257 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECT-TSCEEEE
T ss_pred ceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeC---CCEEEEEeC-CCCEEEE
Confidence 000011123456677888888888887777665 999999995 5667777
Q ss_pred eecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccce
Q psy14511 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFY 200 (488)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (488)
+..+...+..+.+.++... .+... .-...+++..... ....+ .. ....
T Consensus 258 ~~~~~~~v~~v~~~~d~~~---l~~~~----~d~~i~~w~~~~~---------------------~~~~~--~~--h~~~ 305 (577)
T 2ymu_A 258 LTGHSSSVNGVAFRPDGQT---IASAS----DDKTVKLWNRNGQ---------------------LLQTL--TG--HSSS 305 (577)
T ss_dssp ECCCSSCEEEEEECTTSSE---EEEEE----TTSCEEEEETTSC---------------------EEEEE--CC--CSSC
T ss_pred EecCCCCEEEEEEcCCCCE---EEEEe----CCCEEEEEeCCCc---------------------EEEEE--ec--CCCC
Confidence 7777666666555554311 11100 0001111111110 00000 01 1122
Q ss_pred eeeeeeCC--CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee
Q psy14511 201 TSGLDWGY--HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ 278 (488)
Q Consensus 201 ~~~~~~~~--~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~ 278 (488)
+..+.+++ ..+++++.|+.|++||........ +.+ |...+.+++|+|++++++++ +.++.+++||. +++.+.
T Consensus 306 v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~---~~~-~~~~v~~~~~s~~g~~l~~~-~~dg~v~~~~~-~~~~~~ 379 (577)
T 2ymu_A 306 VWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQT---LTG-HSSSVWGVAFSPDGQTIASA-SDDKTVKLWNR-NGQLLQ 379 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE---ECC-CSSCEEEEEECTTSSEEEEE-ETTSEEEEEET-TCCEEE
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEE---EeC-CCCCEEEEEECCCCCEEEEE-eCCCEEEEEcC-CCCEEE
Confidence 33445544 567778899999999987665432 233 88899999999999999999 99999999996 457888
Q ss_pred eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511 279 KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ 355 (488)
Q Consensus 279 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~ 355 (488)
.+.+|...|.+++| ++++|++++.|+.|++||... .....+..|...|.+++|+|++++|++++ |+.|++||...
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~ 457 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG 457 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred EecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 88999999999999 789999999999999999643 46778889999999999999999999999 69999999753
Q ss_pred CCCCccccee-----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEE
Q psy14511 356 LDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETIS 430 (488)
Q Consensus 356 ~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~ 430 (488)
. ....+... ..+|+|+++++++ ++.|+.|++||. +++++..+.+|...|++++|+||+++||+++.||.|+
T Consensus 458 ~-~~~~~~~~~~~v~~~~~spd~~~las--~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~ 533 (577)
T 2ymu_A 458 Q-LLQTLTGHSSSVRGVAFSPDGQTIAS--ASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 533 (577)
T ss_dssp C-EEEEEECCSSCEEEEEECTTSCEEEE--EETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred C-EEEEEcCCCCCEEEEEEcCCCCEEEE--EeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEE
Confidence 2 22222111 2289999999999 788999999995 6889999999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEE
Q psy14511 431 IWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIA 480 (488)
Q Consensus 431 iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~ 480 (488)
+||..........+|.+.|.+++|+||++.+. .++.|..+.+|
T Consensus 534 lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~-------s~~~D~~i~~W 576 (577)
T 2ymu_A 534 LWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIA-------SASSDKTVKLW 576 (577)
T ss_dssp EECTTSCEEEEEECCSSCEEEEEECTTSSCEE-------EEETTSCEEEE
T ss_pred EEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEE-------EEeCCCEEEEe
Confidence 99975444446678999999999999999873 34456556555
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.8e-48 Score=374.52 Aligned_cols=411 Identities=20% Similarity=0.312 Sum_probs=303.0
Q ss_pred ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511 29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV 107 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i 107 (488)
.+.|.+|.+.|++++|||||++||+|+ |+.|+|||.. + +.+..+.+|.+.|++++|+||+++|++++. |++|
T Consensus 9 ~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-~---~~~~~l~gh~~~V~~l~fspdg~~las~~~---d~~i 81 (577)
T 2ymu_A 9 RNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTV 81 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S---CEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCE
T ss_pred eeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-C---CEEEEEeCCCCCEEEEEECCCCCEEEEEeC---CCEE
Confidence 356899999999999999999999998 9999999964 2 345668899999999999999998887776 9999
Q ss_pred EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee----eeccccceecc--ccccccceeeecccccc---
Q psy14511 108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG----FEIDRKKVLNQ--SKRTVSPTQFLRTLGKL--- 178 (488)
Q Consensus 108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--- 178 (488)
++||+ +++.+..+..+...+..+.++++... .......+ +.......... ....+............
T Consensus 82 ~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~---l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 157 (577)
T 2ymu_A 82 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT---IASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASA 157 (577)
T ss_dssp EEEET-TSCEEEEECCCSSCEEEEEECTTSSE---EEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred EEEEC-CCCEEEEEECCCCCEEEEEECCCCCE---EEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceec
Confidence 99995 67888888888888887777765421 11111000 00000000000 00000000000000000
Q ss_pred -----cccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC
Q psy14511 179 -----PRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP 251 (488)
Q Consensus 179 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 251 (488)
............... .....+..+.++ ...+++++.|+.|++||.. ++....+. + |...|.+++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~~~~~~~--~-~~~~v~~~~~s~ 231 (577)
T 2ymu_A 158 SDDKTVKLWNRNGQLLQTLT--GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLT--G-HSSSVRGVAFSP 231 (577)
T ss_dssp ETTSEEEEECTTSCEEEEEE--CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEE--C-CSSCEEEEEECT
T ss_pred ccccceeccccceeeeeecc--CCCcceeeeeecCCCCEEEEEcCCCEEEEEeCC-CcEEEEEe--c-CCCCEEEEEECC
Confidence 000000000000011 111223334444 4568888899999999964 44444433 3 888999999999
Q ss_pred CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEE
Q psy14511 252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVC 329 (488)
Q Consensus 252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~ 329 (488)
++++++++ +.|+.|++||.. ++.+..+.+|...|.+++| +++.+++++.|+.|++||... .....+.+|...|.
T Consensus 232 dg~~l~~~-~~d~~i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~--~~~~~~~~h~~~v~ 307 (577)
T 2ymu_A 232 DGQTIASA-SDDKTVKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVW 307 (577)
T ss_dssp TSSCEEEE-ETTSCEEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CEEEEECCCSSCEE
T ss_pred CCCEEEEE-eCCCEEEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--cEEEEEecCCCCeE
Confidence 99999999 899999999964 5778888999999999999 789999999999999999754 46677889999999
Q ss_pred EEEEccCCcEEEEEe-cCeEEEEECCCCCCCccc----ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec
Q psy14511 330 GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL----GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH 404 (488)
Q Consensus 330 ~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~ 404 (488)
+++|+|++++|++++ |+.|++||.......... .....+|+|+++++++ ++.|+.+++||. +++.+..+.+|
T Consensus 308 ~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--~~~dg~v~~~~~-~~~~~~~~~~~ 384 (577)
T 2ymu_A 308 GVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIAS--ASDDKTVKLWNR-NGQLLQTLTGH 384 (577)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEE--EETTSEEEEEET-TCCEEEEEECC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEE--EeCCCEEEEEcC-CCCEEEEecCC
Confidence 999999999999999 599999998754322111 1112389999999999 789999999995 67888999999
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEE
Q psy14511 405 QERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSL 463 (488)
Q Consensus 405 ~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~ 463 (488)
...|++++|+||+++|++++.|+.|++||...........|...+.+++|+|+++.+..
T Consensus 385 ~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~ 443 (577)
T 2ymu_A 385 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIAS 443 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence 99999999999999999999999999999765444466788999999999999988754
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-47 Score=402.81 Aligned_cols=448 Identities=16% Similarity=0.213 Sum_probs=337.4
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+.||++||+|+.||+|+|||+.+++.+ ..+.+|.+.|.+++|+|+|++||+++ |+.|+|||+.+++ .+..+.+|.
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~ 699 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKL-LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK---LVHTYDEHS 699 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECCS
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEE-EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc---eEEEEcCCC
Confidence 458999999999999999999998854 56789999999999999999999998 9999999998754 455677899
Q ss_pred cceeEEEEecCCC-eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 81 SAVKAIAWCPWEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 81 ~~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
..|.+++|+|++. .++++++. |+.|++||+.+++....+..+...+..+.+++++. ..+..... ....++
T Consensus 700 ~~v~~~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~---~l~s~s~d----g~v~vw 770 (1249)
T 3sfz_A 700 EQVNCCHFTNKSNHLLLATGSN--DFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE---LLASCSAD----GTLRLW 770 (1249)
T ss_dssp SCEEEEEECSSSSCCEEEEEET--TSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT---EEEEEESS----SEEEEE
T ss_pred CcEEEEEEecCCCceEEEEEeC--CCeEEEEECCCcchhheecCCCCCEEEEEEecCCC---EEEEEECC----CeEEEE
Confidence 9999999999533 34444443 99999999999999999988888887777776542 11111100 111222
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC-CcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY-HDTLAVALDTSVYTWNTKTNKTQLLVEYPT 238 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~ 238 (488)
............... . ......+.......+.++.|++ +..++++.++.+.+||+.++.........
T Consensus 771 d~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~- 838 (1249)
T 3sfz_A 771 DVRSANERKSINVKR---F--------FLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTG- 838 (1249)
T ss_dssp EGGGTEEEEEEECCC---C--------C--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECS-
T ss_pred eCCCCcccceecccc---c--------ccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCC-
Confidence 221111000000000 0 0000000011122344455554 45666667899999999999877665432
Q ss_pred CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCC--
Q psy14511 239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTH-- 314 (488)
Q Consensus 239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~-- 314 (488)
|...+.+++|+|+++.++++ +.++.|++||+.++..+..+.+|...|.+++| +++.+++++.||.|++||+...
T Consensus 839 -~~~~v~~~~~sp~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~ 916 (1249)
T 3sfz_A 839 -HHSTIQYCDFSPYDHLAVIA-LSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCK 916 (1249)
T ss_dssp -SSSCCCEEEECSSTTEEEEE-CSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHS
T ss_pred -CCCceEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccce
Confidence 88899999999999999999 99999999999999999999999999999999 6889999999999999985420
Q ss_pred ----------------------------------------------------------------------------Cccc
Q psy14511 315 ----------------------------------------------------------------------------SDYP 318 (488)
Q Consensus 315 ----------------------------------------------------------------------------~~~~ 318 (488)
....
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~ 996 (1249)
T 3sfz_A 917 NSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF 996 (1249)
T ss_dssp CCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCE
T ss_pred eeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCcee
Confidence 1122
Q ss_pred eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511 319 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYP 393 (488)
Q Consensus 319 ~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~ 393 (488)
..+..|...|.+++|+|++++|++++ |+.|++||+.+++........ ...|+|++.. ++ ++.|+.|++||+.
T Consensus 997 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~--~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 997 SSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRL-LS--WSFDGTVKVWNVI 1073 (1249)
T ss_dssp EECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEE-EE--EESSSEEEEEETT
T ss_pred eecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcE-EE--EECCCcEEEEECC
Confidence 33456888899999999999999998 699999999887543222111 1278887654 44 5789999999999
Q ss_pred CcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc-ccccccCCcceEEeecCCCceEEEEeeecccc
Q psy14511 394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK-RKARQVGSGSSLEFAILKQPVSLTALLRSRAV 472 (488)
Q Consensus 394 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~ 472 (488)
+++.+..+.+|.+.|++++|+||+++|++++.||.|++||+.+++.. ....|.+.+.+++|+|+++.+.. ++
T Consensus 1074 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat-------~~ 1146 (1249)
T 3sfz_A 1074 TGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLAT-------GD 1146 (1249)
T ss_dssp TTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEE-------EE
T ss_pred CCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEE-------Ee
Confidence 99999999999999999999999999999999999999999998876 45678899999999999987744 33
Q ss_pred cceeeEEEEeeccc
Q psy14511 473 EKQQHAIAYTVFGE 486 (488)
Q Consensus 473 ~~~~~~i~~~~~g~ 486 (488)
.+..+.+|...+|+
T Consensus 1147 ~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1147 DNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp TTSCCCEEESSSSC
T ss_pred CCCEEEEEECCCCc
Confidence 45555556555554
No 6
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-47 Score=380.31 Aligned_cols=404 Identities=12% Similarity=0.106 Sum_probs=285.2
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+.||++||+|+.||+|+|||..+.+.. ....|...|.+++|+| |++|++++ |++|+|||+.+++. +..+. |.
T Consensus 26 spdg~~lAsgs~Dg~I~lw~~~~~~~~--~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~---~~~~~-~~ 98 (902)
T 2oaj_A 26 DFTQNLLAIATVTGEVHIYGQQQVEVV--IKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV---LTTVF-VP 98 (902)
T ss_dssp ETTTTEEEEEETTSEEEEECSTTCEEE--EECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE---EEEEE-CS
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCcEEE--EEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE---EEEEc-CC
Confidence 348999999999999999998776532 2235788999999999 88999998 99999999987543 33333 66
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
+.|++++|+|+++++++++. ||+|++||+.+++.. .+....... ....+
T Consensus 99 ~~V~~v~~sp~g~~l~sgs~---dg~V~lwd~~~~~~~-~~~i~~~~~--~~~~~------------------------- 147 (902)
T 2oaj_A 99 GKITSIDTDASLDWMLIGLQ---NGSMIVYDIDRDQLS-SFKLDNLQK--SSFFP------------------------- 147 (902)
T ss_dssp SCEEEEECCTTCSEEEEEET---TSCEEEEETTTTEEE-EEEECCHHH--HHTCS-------------------------
T ss_pred CCEEEEEECCCCCEEEEEcC---CCcEEEEECCCCccc-cceeccccc--ccccc-------------------------
Confidence 89999999999998877776 999999999887642 111000000 00000
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC---CcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY---HDTLAVALDTSVYTWNTKTNKTQLLVEYP 237 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iw~~~~~~~~~~~~~~ 237 (488)
......+.++.|++ +.+++++.|+.| +||+++++....+...
T Consensus 148 ----------------------------------~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~ 192 (902)
T 2oaj_A 148 ----------------------------------AARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYE 192 (902)
T ss_dssp ----------------------------------SSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCC
T ss_pred ----------------------------------ccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecc
Confidence 00011233455554 357777799999 9999999877766532
Q ss_pred ---------------CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee--e---cc-------------cc
Q psy14511 238 ---------------TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK--L---RT-------------HM 284 (488)
Q Consensus 238 ---------------~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~--~---~~-------------~~ 284 (488)
..|...|.+++|+|+|++|+++ +.|+.|++||+++++++.. + .. |.
T Consensus 193 ~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg-s~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~ 271 (902)
T 2oaj_A 193 LPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI-HEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNA 271 (902)
T ss_dssp BCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE-ETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCC
T ss_pred cCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCcccc
Confidence 1134779999999999999999 9999999999988876543 2 11 23
Q ss_pred ccEEEEEe----c---CCEEEEeec-------------------------------------------------------
Q psy14511 285 HQVIAMCW----N---GNLLSCGTI------------------------------------------------------- 302 (488)
Q Consensus 285 ~~v~~~~~----~---~~~l~~~~~------------------------------------------------------- 302 (488)
..|.+++| + +.++++|+.
T Consensus 272 ~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 351 (902)
T 2oaj_A 272 AKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPI 351 (902)
T ss_dssp CEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEEC
T ss_pred CCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEEC
Confidence 46777777 1 134555533
Q ss_pred ---------------------CCeEEEEECcCCCccce------eeecCCccEE--------------------------
Q psy14511 303 ---------------------GGNILHYDVRTHSDYPT------AITREGDVVC-------------------------- 329 (488)
Q Consensus 303 ---------------------dg~i~i~d~~~~~~~~~------~~~~~~~~i~-------------------------- 329 (488)
||.|++||+.++..... .+..|...|+
T Consensus 352 ~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l 431 (902)
T 2oaj_A 352 PRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLL 431 (902)
T ss_dssp CSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSC
T ss_pred CCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcc
Confidence 34444555433211000 0111223344
Q ss_pred --------EEEEccCCcEEEEEe-cCeEEEEECCCCCCCcc--c--------------ceeeeeecCCCCEEEEEccCCC
Q psy14511 330 --------GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP--L--------------GLIVPKLKREGRELVTSHGKQD 384 (488)
Q Consensus 330 --------~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~--~--------------~~~~~~~~~~~~~l~~~~g~~~ 384 (488)
.++|+|++++|++++ |++|++||+.++..... + .....+|+|++++|++ |+.|
T Consensus 432 ~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAs--gs~D 509 (902)
T 2oaj_A 432 KGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAV--SIET 509 (902)
T ss_dssp CCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEE--EETT
T ss_pred cCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEE--EecC
Confidence 345578999999999 79999999988753211 1 1112299999999999 7899
Q ss_pred CeEEEEeCCCc---------------------------------------------ceeEEEeeccccEEEEEEcCCCCE
Q psy14511 385 CSLKMWEYPRL---------------------------------------------HLIEELKIHQERILSAVLSPDQTC 419 (488)
Q Consensus 385 ~~i~i~d~~~~---------------------------------------------~~~~~~~~~~~~v~~~~~s~~~~~ 419 (488)
++|++||+.++ +++..+.+|.+.|++++||||| +
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~ 588 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F 588 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E
Confidence 99999999765 2467888999999999999999 9
Q ss_pred EEEEeCCCcEEEEecCCCCcc------ccc-cccCCcceEEee-----cCCCceEEEEeeecccccceeeEEEEe---ec
Q psy14511 420 VAAASADETISIWNCFPRDKK------RKA-RQVGSGSSLEFA-----ILKQPVSLTALLRSRAVEKQQHAIAYT---VF 484 (488)
Q Consensus 420 l~t~~~dg~v~iw~~~~~~~~------~~~-~~~~~v~~~~~s-----~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~ 484 (488)
||+|+.|++|++||+.++... ... +|...|.+++|+ |||. .....+.++.+..+.+|.. ++
T Consensus 589 lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~----~~~~l~sgs~D~tv~~wd~~p~~~ 664 (902)
T 2oaj_A 589 VGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGY----SSILMVCGTDMGEVITYKILPASG 664 (902)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSS----EEEEEEEEETTSEEEEEEEEECGG
T ss_pred EEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCC----cceEEEEEecCCcEEEEEEecCCC
Confidence 999999999999999887653 222 688889999999 8862 1122245566777777766 55
Q ss_pred cc
Q psy14511 485 GE 486 (488)
Q Consensus 485 g~ 486 (488)
|+
T Consensus 665 g~ 666 (902)
T 2oaj_A 665 GK 666 (902)
T ss_dssp GC
T ss_pred Cc
Confidence 54
No 7
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-46 Score=367.62 Aligned_cols=388 Identities=15% Similarity=0.167 Sum_probs=298.2
Q ss_pred ccCCceEEEeecCCeEEEEEcccC----cccceeecccCce-EEEEEEcc--CCcEEEEec-CCeEEEEeccccC-----
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTH----SDYPTAITREGDV-VCGLKWSP--NGRYLASGS-NNTVKIWDFRQLD----- 68 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~----~~~~~~~~~h~~~-V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~----- 68 (488)
+.||++||+++ ++.|+|||+.++ + ....+.+|... |++++|+| ++++||+++ |+.|++||+.+++
T Consensus 27 spdg~~l~~~~-~~~v~v~~~~~~~~~~~-~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 104 (615)
T 1pgu_A 27 DPTTNAIAYPC-GKSAFVRCLDDGDSKVP-PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSV 104 (615)
T ss_dssp ETTTTEEEEEE-TTEEEEEECCSSCCSSC-SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEE
T ss_pred CCCCCEEEEec-CCeEEEEECCCCCCccc-cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccc
Confidence 34899999988 889999999987 5 44678899999 99999999 999999998 9999999997541
Q ss_pred cCCCcccccccccceeEEEEecCCCeEEeeeCCccc----ceEEEEecCCCeeeeeeecCCCccccccccccccccceeE
Q psy14511 69 AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD----QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHL 144 (488)
Q Consensus 69 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (488)
.......+..|..+|.+++|+|+++++++++. + +.|++|| .++....+..+...+.
T Consensus 105 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---~~~~~~~v~~~d--~~~~~~~~~~~~~~v~--------------- 164 (615)
T 1pgu_A 105 EVNVKSEFQVLAGPISDISWDFEGRRLCVVGE---GRDNFGVFISWD--SGNSLGEVSGHSQRIN--------------- 164 (615)
T ss_dssp EEEEEEEEECCSSCEEEEEECTTSSEEEEEEC---CSSCSEEEEETT--TCCEEEECCSCSSCEE---------------
T ss_pred cccccchhhcccccEEEEEEeCCCCEEEEecc---CCCCccEEEEEE--CCCcceeeecCCccEE---------------
Confidence 12344556779999999999999998888876 5 6888887 5555555544433222
Q ss_pred EEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCC---cEEEEECCCeEE
Q psy14511 145 SFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH---DTLAVALDTSVY 221 (488)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~v~ 221 (488)
.+.|+++ .+++++.|+.|+
T Consensus 165 ----------------------------------------------------------~~~~~~~~~~~l~~~~~d~~v~ 186 (615)
T 1pgu_A 165 ----------------------------------------------------------ACHLKQSRPMRSMTVGDDGSVV 186 (615)
T ss_dssp ----------------------------------------------------------EEEECSSSSCEEEEEETTTEEE
T ss_pred ----------------------------------------------------------EEEECCCCCcEEEEEeCCCcEE
Confidence 2333332 578888999999
Q ss_pred EEECCCCceEEEEecCCCCCC---ceEEEEEcCC-CCeEEEEeCCCCcEEEEECCcceeeeee-c---cccccEEEEEe-
Q psy14511 222 TWNTKTNKTQLLVEYPTYDNA---YISCVAWKPR-TTDLAVTNTCTEYIDLWHEQEERLIQKL-R---THMHQVIAMCW- 292 (488)
Q Consensus 222 iw~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~~~~~i~i~d~~~~~~~~~~-~---~~~~~v~~~~~- 292 (488)
+||+.+++....+.. |.. .|.+++|+|+ +++++++ +.|+.|++||+.+++.+..+ . .|...|.+++|
T Consensus 187 vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~ 262 (615)
T 1pgu_A 187 FYQGPPFKFSASDRT---HHKQGSFVRDVEFSPDSGEFVITV-GSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL 262 (615)
T ss_dssp EEETTTBEEEEEECS---SSCTTCCEEEEEECSTTCCEEEEE-ETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES
T ss_pred EEeCCCcceeeeecc---cCCCCceEEEEEECCCCCCEEEEE-eCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc
Confidence 999999887766554 667 8999999999 9999999 89999999999999999988 6 89999999999
Q ss_pred cCCEEEEeecCCeEEEEECcCCCcc--------------------------------------------ceeeecCCcc-
Q psy14511 293 NGNLLSCGTIGGNILHYDVRTHSDY--------------------------------------------PTAITREGDV- 327 (488)
Q Consensus 293 ~~~~l~~~~~dg~i~i~d~~~~~~~--------------------------------------------~~~~~~~~~~- 327 (488)
+++++++++.|+.|++||+++++.. ...+..|...
T Consensus 263 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v 342 (615)
T 1pgu_A 263 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGI 342 (615)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCE
Confidence 8999999999999999998764210 1112223333
Q ss_pred --------------------------------EEEEEEccCCcEEEEEe-cCeEEEEEC---------------------
Q psy14511 328 --------------------------------VCGLKWSPNGRYLASGS-NNTVKIWDF--------------------- 353 (488)
Q Consensus 328 --------------------------------i~~~~~s~~~~~l~~~~-d~~i~iwd~--------------------- 353 (488)
|.+++| +++..|++++ |+.+++||+
T Consensus 343 ~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~ 421 (615)
T 1pgu_A 343 TALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTA 421 (615)
T ss_dssp EEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEE
T ss_pred EEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEE
Confidence 333333 2233444444 344444443
Q ss_pred -----------------------------------------------------CCCCCC-cccce-----eeeeecCCCC
Q psy14511 354 -----------------------------------------------------RQLDAK-RPLGL-----IVPKLKREGR 374 (488)
Q Consensus 354 -----------------------------------------------------~~~~~~-~~~~~-----~~~~~~~~~~ 374 (488)
.+.+.. ..+.. ...+|+|+++
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 501 (615)
T 1pgu_A 422 VLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 501 (615)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS
T ss_pred EEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC
Confidence 322110 00100 0128999999
Q ss_pred EEEEEccCCCCeEEEEeCCCcceeEEEee-ccccEEEEEEcC----------CCCEEEEEeCCCcEEEEecCCC-Ccc-c
Q psy14511 375 ELVTSHGKQDCSLKMWEYPRLHLIEELKI-HQERILSAVLSP----------DQTCVAAASADETISIWNCFPR-DKK-R 441 (488)
Q Consensus 375 ~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~----------~~~~l~t~~~dg~v~iw~~~~~-~~~-~ 441 (488)
++++ ++.|+.|++||+.+++.+..+.+ |...|++++|+| ++++||+++.||.|++||+.++ +.. .
T Consensus 502 ~l~~--~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 579 (615)
T 1pgu_A 502 YIAA--GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 579 (615)
T ss_dssp EEEE--EETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE
T ss_pred EEEE--cCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh
Confidence 9999 78899999999999999999888 999999999999 9999999999999999999987 444 4
Q ss_pred cccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeec
Q psy14511 442 KARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVF 484 (488)
Q Consensus 442 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 484 (488)
...|...|.+++|+|+++ + ..+..+..+.+|..+.
T Consensus 580 ~~~h~~~v~~l~~s~~~~-l-------~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 580 LNAHKDGVNNLLWETPST-L-------VSSGADACIKRWNVVL 614 (615)
T ss_dssp TTSSTTCEEEEEEEETTE-E-------EEEETTSCEEEEEEC-
T ss_pred hhcCccceEEEEEcCCCC-e-------EEecCCceEEEEeeec
Confidence 577899999999999998 5 3355777788887654
No 8
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.2e-46 Score=393.29 Aligned_cols=417 Identities=16% Similarity=0.225 Sum_probs=315.1
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC 78 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~ 78 (488)
+.||++||+|+.||.|+|||+.+++.+ ..+.+|...|.+++|+| ++.++++++ |+.|++||+.+++ .+..+.+
T Consensus 666 s~~~~~l~s~~~d~~v~vwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~~~ 741 (1249)
T 3sfz_A 666 SSDDSYIATCSADKKVKIWDSATGKLV-HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFG 741 (1249)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEECC
T ss_pred ecCCCEEEEEeCCCeEEEEECCCCceE-EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhheecC
Confidence 458999999999999999999998854 66889999999999999 556888988 9999999998754 4455778
Q ss_pred cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCC-------------ccccccccccccccceeEE
Q psy14511 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQ-------------QANDETISYREQKKRRHLS 145 (488)
Q Consensus 79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~ 145 (488)
|.+.|.+++|+|+++.+++++. |++|++||+.+++....+..... .+..+.+++++. .+.
T Consensus 742 h~~~v~~~~~sp~~~~l~s~s~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~----~l~ 814 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDDELLASCSA---DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD----KII 814 (1249)
T ss_dssp CSSCEEEEEECSSTTEEEEEES---SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS----EEE
T ss_pred CCCCEEEEEEecCCCEEEEEEC---CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC----EEE
Confidence 9999999999999998887776 99999999999887766653321 122233333221 111
Q ss_pred EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEE
Q psy14511 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTW 223 (488)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw 223 (488)
.... ....++...... ............+..+.++ +..+++++.++.|++|
T Consensus 815 ~~~~----~~v~~~d~~~~~-----------------------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vw 867 (1249)
T 3sfz_A 815 VAAK----NKVLLFDIHTSG-----------------------LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELW 867 (1249)
T ss_dssp EEET----TEEEEEETTTCC-----------------------EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEE
T ss_pred EEcC----CcEEEEEecCCC-----------------------ceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 1100 001111111000 0000000111223334444 4567777799999999
Q ss_pred ECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-------------------------------
Q psy14511 224 NTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ------------------------------- 272 (488)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~------------------------------- 272 (488)
++.++.....+. + |...|.+++|+|+++.++++ +.|+.|++|++.
T Consensus 868 d~~~~~~~~~~~--~-h~~~v~~v~~spdg~~l~s~-s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1249)
T 3sfz_A 868 NIDSRLKVADCR--G-HLSWVHGVMFSPDGSSFLTA-SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNI 943 (1249)
T ss_dssp ETTTTEEEEEEC--C-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESS
T ss_pred EcCCCceeeecC--C-CccceEEEEECCCCCEEEEE-eCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCC
Confidence 999987765554 3 88889999999998888888 788888888743
Q ss_pred ------------------------------------------------cceeeeeeccccccEEEEEe--cCCEEEEeec
Q psy14511 273 ------------------------------------------------EERLIQKLRTHMHQVIAMCW--NGNLLSCGTI 302 (488)
Q Consensus 273 ------------------------------------------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 302 (488)
+++....+.+|...|.+++| +++++++++.
T Consensus 944 ~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 1023 (1249)
T 3sfz_A 944 RGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE 1023 (1249)
T ss_dssp SSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECS
T ss_pred cceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcC
Confidence 22233344568888888998 7899999999
Q ss_pred CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccccee-----eeeecCCCCEEE
Q psy14511 303 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELV 377 (488)
Q Consensus 303 dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~ 377 (488)
||.|++||+.++. ......|...|.+++|+|++.+++.+.|+.+++||+.+++....+... ..+|+|++++++
T Consensus 1024 dg~i~vwd~~~~~--~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 1101 (1249)
T 3sfz_A 1024 DSVIQVWNWQTGD--YVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFS 1101 (1249)
T ss_dssp SSBEEEEETTTTE--EECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCE
T ss_pred CCEEEEEECCCCc--eEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEE
Confidence 9999999998864 334568889999999999887665555899999999988655444322 228999999999
Q ss_pred EEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc----------ccccC
Q psy14511 378 TSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK----------ARQVG 447 (488)
Q Consensus 378 ~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~----------~~~~~ 447 (488)
+ ++.|+.|++||+.+++++..+.+|...|++++|+||+++|++++.||.|++||+.+++.... ..|.+
T Consensus 1102 s--~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (1249)
T 3sfz_A 1102 S--TSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGG 1179 (1249)
T ss_dssp E--ECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCS
T ss_pred E--EcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCc
Confidence 9 78899999999999999999999999999999999999999999999999999999887643 46888
Q ss_pred CcceEEeecCCCceEEE
Q psy14511 448 SGSSLEFAILKQPVSLT 464 (488)
Q Consensus 448 ~v~~~~~s~~~~~~~~~ 464 (488)
.+.+++|+|+++.+...
T Consensus 1180 ~v~~l~fs~dg~~l~s~ 1196 (1249)
T 3sfz_A 1180 WVTDVCFSPDSKTLVSA 1196 (1249)
T ss_dssp CCCEEEECTTSSCEEEE
T ss_pred eEEEEEECCCCCEEEEC
Confidence 99999999999988543
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-45 Score=326.87 Aligned_cols=288 Identities=19% Similarity=0.327 Sum_probs=239.8
Q ss_pred eeecccCceEEEEEEccC----CcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511 30 TAITREGDVVCGLKWSPN----GRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD 104 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~----g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d 104 (488)
..+.+|.+.|.+++|+|+ +++|++|+ |++|+|||+.+.+ ......+.+|...|.+++|+++++.+++++. |
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~-~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~---D 101 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER-LDLQWSLEGHQLGVVSVDISHTLPIAASSSL---D 101 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECSSSSEEEEEET---T
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC-eeeeeeeccCCCCEEEEEECCCCCEEEEEeC---C
Confidence 445789999999999985 67999998 9999999997643 2233457899999999999999987777666 9
Q ss_pred ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511 105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA 184 (488)
Q Consensus 105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
++|++||+.+++.+..+..+...+..+.+++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp------------------------------------------------- 132 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSP------------------------------------------------- 132 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECT-------------------------------------------------
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECC-------------------------------------------------
Confidence 9999999999988777765533332222222
Q ss_pred CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC
Q psy14511 185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE 264 (488)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 264 (488)
++..+++++.++.|++|++.+++....+.. +...+.+++|+|++++|+++ +.|+
T Consensus 133 ----------------------dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~---~~~~v~~~~~spdg~~lasg-~~dg 186 (321)
T 3ow8_A 133 ----------------------DSQYLATGTHVGKVNIFGVESGKKEYSLDT---RGKFILSIAYSPDGKYLASG-AIDG 186 (321)
T ss_dssp ----------------------TSSEEEEECTTSEEEEEETTTCSEEEEEEC---SSSCEEEEEECTTSSEEEEE-ETTS
T ss_pred ----------------------CCCEEEEEcCCCcEEEEEcCCCceeEEecC---CCceEEEEEECCCCCEEEEE-cCCC
Confidence 224577778999999999999887665554 77789999999999999999 9999
Q ss_pred cEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEE
Q psy14511 265 YIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS 342 (488)
Q Consensus 265 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 342 (488)
.|++||+++++.+..+.+|..+|.+++| ++++|++++.|+.|++||++.. .....+.+|...|.+++|+|++++|++
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~sp~~~~l~s 265 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTHFVS 265 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-ceeEEEcCCCCceEEEEECCCCCEEEE
Confidence 9999999999999999999999999999 6899999999999999999875 466788899999999999999999998
Q ss_pred EecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEE
Q psy14511 343 GSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAA 422 (488)
Q Consensus 343 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t 422 (488)
++ .|++|++||+.+++++.++.+|...|++++|+|++++|++
T Consensus 266 ~s--------------------------------------~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 266 SS--------------------------------------SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp EE--------------------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred Ee--------------------------------------CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEE
Confidence 86 2444455555556778888899999999999999999999
Q ss_pred EeCCCcEEEEecC
Q psy14511 423 ASADETISIWNCF 435 (488)
Q Consensus 423 ~~~dg~v~iw~~~ 435 (488)
++.||.|++||+.
T Consensus 308 ~~~d~~i~vwd~p 320 (321)
T 3ow8_A 308 VGDDQEIHIYDCP 320 (321)
T ss_dssp EETTCCEEEEECC
T ss_pred EeCCCeEEEEeCC
Confidence 9999999999963
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-45 Score=338.83 Aligned_cols=285 Identities=19% Similarity=0.345 Sum_probs=242.7
Q ss_pred eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511 30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR 108 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~ 108 (488)
..+.+|.++|++++|+|++++|++|+ |+.|+|||+.+++ ....+.+|.+.|.+++|+|+++++++++. |++|+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~---~~~~l~~h~~~V~~v~~~~~~~~l~sgs~---D~~i~ 175 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDHSGKLLASCSA---DMTIK 175 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC---CCEEECCCSSCEEEEEECTTSSEEEEEET---TSCCC
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEEeccCCcEEEEEEcCCCCEEEEEeC---CCeEE
Confidence 45789999999999999999999998 9999999998754 44567889999999999999988777776 99999
Q ss_pred EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511 109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER 188 (488)
Q Consensus 109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (488)
+||+.+++++..+..+...+..+.+.+
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p----------------------------------------------------- 202 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMP----------------------------------------------------- 202 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECS-----------------------------------------------------
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeC-----------------------------------------------------
Confidence 999998887777666544332222221
Q ss_pred eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511 189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL 268 (488)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i 268 (488)
.++.+++++.|+.|++||+.++.....+.. |...+.+++++|++++++++ +.|+.|++
T Consensus 203 ------------------~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~~~~g~~l~s~-s~D~~v~v 260 (410)
T 1vyh_C 203 ------------------NGDHIVSASRDKTIKMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASC-SNDQTVRV 260 (410)
T ss_dssp ------------------SSSEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEE-ETTSCEEE
T ss_pred ------------------CCCEEEEEeCCCeEEEEECCCCcEEEEEeC---CCccEEEEEECCCCCEEEEE-cCCCeEEE
Confidence 235688889999999999999987766654 88899999999999999999 99999999
Q ss_pred EECCcceeeeeeccccccEEEEEec----------------------CCEEEEeecCCeEEEEECcCCCccceeeecCCc
Q psy14511 269 WHEQEERLIQKLRTHMHQVIAMCWN----------------------GNLLSCGTIGGNILHYDVRTHSDYPTAITREGD 326 (488)
Q Consensus 269 ~d~~~~~~~~~~~~~~~~v~~~~~~----------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 326 (488)
||+.++++...+.+|...|.+++|. +.++++|+.|+.|++||++++ .+...+.+|..
T Consensus 261 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~-~~~~~~~~h~~ 339 (410)
T 1vyh_C 261 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339 (410)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT-EEEEEEECCSS
T ss_pred EECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC-ceEEEEECCCC
Confidence 9999999999999999999999993 568999999999999999986 46778889999
Q ss_pred cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511 327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ 405 (488)
Q Consensus 327 ~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~ 405 (488)
.|.+++|+|++++|++++ |+.|++||+ .+++++..+.+|.
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~---------------------------------------~~~~~~~~~~~h~ 380 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDY---------------------------------------KNKRCMKTLNAHE 380 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECC---------------------------------------TTSCCCEEEECCS
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEEC---------------------------------------CCCceEEEEcCCC
Confidence 999999999999999886 355555554 4456677888999
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511 406 ERILSAVLSPDQTCVAAASADETISIWNCF 435 (488)
Q Consensus 406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~ 435 (488)
..|++++|+|++++|++|+.||.|++|++.
T Consensus 381 ~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999999999999999863
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.3e-45 Score=329.74 Aligned_cols=282 Identities=20% Similarity=0.336 Sum_probs=242.6
Q ss_pred ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511 29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV 107 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i 107 (488)
...+.+|.+.|.+++|+|++++|++++ |+.|++||+.+++ .+..+..|...|.+++|+|+++++++++. |+.+
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---d~~v 121 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN---KVHAIPLRSSWVMTCAYAPSGNYVACGGL---DNIC 121 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC---EEEEEECSSSCEEEEEECTTSSEEEEEET---TCEE
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC---cceEeecCCccEEEEEECCCCCEEEEEeC---CCeE
Confidence 356889999999999999999999998 9999999998744 44456779999999999999998877776 9999
Q ss_pred EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511 108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE 187 (488)
Q Consensus 108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
++|++.++....
T Consensus 122 ~iw~~~~~~~~~-------------------------------------------------------------------- 133 (340)
T 1got_B 122 SIYNLKTREGNV-------------------------------------------------------------------- 133 (340)
T ss_dssp EEEETTTCSBSC--------------------------------------------------------------------
T ss_pred EEEECccCCCcc--------------------------------------------------------------------
Confidence 999987543100
Q ss_pred eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511 188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267 (488)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~ 267 (488)
.....+.+ |...+.++.|++++. ++++ +.|+.|+
T Consensus 134 -------------------------------------------~~~~~~~~-h~~~v~~~~~~~~~~-l~s~-s~d~~i~ 167 (340)
T 1got_B 134 -------------------------------------------RVSRELAG-HTGYLSCCRFLDDNQ-IVTS-SGDTTCA 167 (340)
T ss_dssp -------------------------------------------EEEEEEEC-CSSCEEEEEEEETTE-EEEE-ETTSCEE
T ss_pred -------------------------------------------eeEEEecC-CCccEEEEEECCCCc-EEEE-ECCCcEE
Confidence 00111222 788999999998874 7777 8999999
Q ss_pred EEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-
Q psy14511 268 LWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS- 344 (488)
Q Consensus 268 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 344 (488)
+||+++++.+..+.+|...|.+++| +++++++|+.|+.|++||++++ .....+.+|...|.+++|+|++++|++++
T Consensus 168 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-MCRQTFTGHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-SEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-eeEEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence 9999999999999999999999999 6889999999999999999886 46778889999999999999999999999
Q ss_pred cCeEEEEECCCCCCCcccc-------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCC
Q psy14511 345 NNTVKIWDFRQLDAKRPLG-------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQ 417 (488)
Q Consensus 345 d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 417 (488)
|+.|++||+++.+....+. ....+|+|+++++++ |+.|+.|++||+.+++.+..+.+|.++|.+++|+|++
T Consensus 247 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg 324 (340)
T 1got_B 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA--GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG 324 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE--EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE--ECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCC
Confidence 6999999998765332221 112289999999999 7899999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEe
Q psy14511 418 TCVAAASADETISIWN 433 (488)
Q Consensus 418 ~~l~t~~~dg~v~iw~ 433 (488)
++||+|+.||.|++||
T Consensus 325 ~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 325 MAVATGSWDSFLKIWN 340 (340)
T ss_dssp SCEEEEETTSCEEEEC
T ss_pred CEEEEEcCCccEEecC
Confidence 9999999999999997
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.8e-46 Score=341.95 Aligned_cols=305 Identities=18% Similarity=0.314 Sum_probs=251.6
Q ss_pred eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCe
Q psy14511 16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPT 94 (488)
Q Consensus 16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 94 (488)
.+..|+..... ....+.+|.+.|++++|+|++++|++|+ |++|+|||+.+++ ....+..|...|.+++|+|++++
T Consensus 47 ~~~~~~~~~~~-~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 47 TAVSFNPTDLV-CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp GCCCCCCCCCE-EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE---EEEEEECCCTTCCCCEECTTSSE
T ss_pred cccccccceeE-EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---cceEEecCCCCEEEEEECCCCCE
Confidence 44456665544 3467899999999999999999999999 9999999998744 34456789999999999999988
Q ss_pred EEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecc
Q psy14511 95 LLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRT 174 (488)
Q Consensus 95 l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (488)
+++++. |+.+++|++.+...... .
T Consensus 123 las~~~---d~~v~iw~~~~~~~~~~---~-------------------------------------------------- 146 (380)
T 3iz6_a 123 VACGGL---DSACSIFNLSSQADRDG---N-------------------------------------------------- 146 (380)
T ss_dssp EEECCS---SSCCEEEECCCCSSCCC---S--------------------------------------------------
T ss_pred EEEeeC---CCcEEEEECCCCccccC---C--------------------------------------------------
Confidence 777776 99999999865431000 0
Q ss_pred cccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC-
Q psy14511 175 LGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT- 253 (488)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 253 (488)
......+.+ |...+.++.|.|++
T Consensus 147 -------------------------------------------------------~~~~~~~~g-h~~~v~~~~~~~~~~ 170 (380)
T 3iz6_a 147 -------------------------------------------------------MPVSRVLTG-HKGYASSCQYVPDQE 170 (380)
T ss_dssp -------------------------------------------------------STTCCBCCC-CSSCCCCCBCCSSSS
T ss_pred -------------------------------------------------------ccceeeccC-CCcceEEEEEecCCC
Confidence 000001122 78889999999975
Q ss_pred CeEEEEeCCCCcEEEEECCcceeeeee-----ccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCC
Q psy14511 254 TDLAVTNTCTEYIDLWHEQEERLIQKL-----RTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325 (488)
Q Consensus 254 ~~l~~~~~~~~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 325 (488)
..++++ +.|++|++||+.+++.+..+ .+|...+.++++ +++++++|+.|+.|++||++........+.+|.
T Consensus 171 ~~l~s~-s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 171 TRLITG-SGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE 249 (380)
T ss_dssp SCEEEE-CTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred CEEEEE-CCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence 457777 99999999999999888776 578999999998 578999999999999999986667788899999
Q ss_pred ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------------eeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511 326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------------IVPKLKREGRELVTSHGKQDCSLKMWEY 392 (488)
Q Consensus 326 ~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~g~~~~~i~i~d~ 392 (488)
..|.+++|+|++++|++++ |+.|++||++++.....+.. ...+|+|+|+++++ |+.||.|++||+
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--g~~dg~i~vwd~ 327 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFA--GYSNGDCYVWDT 327 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE--ECTTSCEEEEET
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEE--EECCCCEEEEEC
Confidence 9999999999999999999 69999999998754322211 12389999999999 889999999999
Q ss_pred CCcceeEEE----eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511 393 PRLHLIEEL----KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK 439 (488)
Q Consensus 393 ~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~ 439 (488)
.+++.+..+ .+|.+.|++++|+||+++|++|+.||.|++|++...+.
T Consensus 328 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 328 LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 999888877 68999999999999999999999999999999987653
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.3e-45 Score=329.22 Aligned_cols=285 Identities=20% Similarity=0.347 Sum_probs=242.2
Q ss_pred ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511 29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV 107 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i 107 (488)
...+.+|.+.|++++|+|++++||+|+ |++|+|||..+++ ....+..|...|.+++|+|++..+++.+. |+.+
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~---~~~~~~~~~~~v~~~~~sp~g~~lasg~~---d~~i 130 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN---KEHAVTMPCTWVMACAYAPSGCAIACGGL---DNKC 130 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECSSSCCCEEEECTTSSEEEEEST---TSEE
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC---cceEEecCCCCEEEEEECCCCCEEEEeeC---CCCE
Confidence 356789999999999999999999999 9999999987744 33345668889999999999988777766 9999
Q ss_pred EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511 108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE 187 (488)
Q Consensus 108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
++|++........
T Consensus 131 ~v~~~~~~~~~~~------------------------------------------------------------------- 143 (354)
T 2pbi_B 131 SVYPLTFDKNENM------------------------------------------------------------------- 143 (354)
T ss_dssp EEEECCCCTTCCS-------------------------------------------------------------------
T ss_pred EEEEEeccccccc-------------------------------------------------------------------
Confidence 9999864321000
Q ss_pred eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511 188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267 (488)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~ 267 (488)
......+. + |...|.+++|+|++..++++ +.|++|+
T Consensus 144 ----------------------------------------~~~~~~~~--~-h~~~v~~~~~~~~~~~l~t~-s~D~~v~ 179 (354)
T 2pbi_B 144 ----------------------------------------AAKKKSVA--M-HTNYLSACSFTNSDMQILTA-SGDGTCA 179 (354)
T ss_dssp ----------------------------------------GGGCEEEE--E-CSSCEEEEEECSSSSEEEEE-ETTSEEE
T ss_pred ----------------------------------------cccceeee--c-cCCcEEEEEEeCCCCEEEEE-eCCCcEE
Confidence 00001111 1 88899999999999999999 9999999
Q ss_pred EEECCcceeeeeeccccccEEEEEe----cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEE
Q psy14511 268 LWHEQEERLIQKLRTHMHQVIAMCW----NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG 343 (488)
Q Consensus 268 i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 343 (488)
+||+++++.+..+.+|...+.++++ +++.+++|+.||.|++||++++ .+...+..|...|.+++|+|++++|+++
T Consensus 180 lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 258 (354)
T 2pbi_B 180 LWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG-QCVQAFETHESDVNSVRYYPSGDAFASG 258 (354)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCCCCCeEEEEEeCCCCEEEEE
Confidence 9999999999999999999999988 3689999999999999999986 4677788999999999999999999999
Q ss_pred e-cCeEEEEECCCCCCCcccc-------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511 344 S-NNTVKIWDFRQLDAKRPLG-------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP 415 (488)
Q Consensus 344 ~-d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~ 415 (488)
+ |+.|++||++.......+. ....+|+|+++++++ |+.|+.|++||+.+++.+..+.+|.+.|++++|+|
T Consensus 259 s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~--g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp 336 (354)
T 2pbi_B 259 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA--GYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP 336 (354)
T ss_dssp ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE--EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT
T ss_pred eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE--EECCCcEEEEECCCCceEEEEECCCCcEEEEEECC
Confidence 9 6999999998764322211 112389999999999 78999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEe
Q psy14511 416 DQTCVAAASADETISIWN 433 (488)
Q Consensus 416 ~~~~l~t~~~dg~v~iw~ 433 (488)
|+++|++|+.||.|++|+
T Consensus 337 dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 337 DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSCEEEEETTSEEEEEC
T ss_pred CCCEEEEEcCCCCEEecC
Confidence 999999999999999996
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-44 Score=327.48 Aligned_cols=306 Identities=11% Similarity=0.180 Sum_probs=224.2
Q ss_pred EEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-------CCeEEEEeccccCcCCC-ccccccc
Q psy14511 8 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-------NNTVKIWDFRQLDAKRP-QVNNQCH 79 (488)
Q Consensus 8 la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-------d~~i~vwd~~~~~~~~~-~~~~~~h 79 (488)
++.++.+.....|++.... ...|...|++++|||||++||+++ |+.|++|+..++..... .....+|
T Consensus 19 ~~~~~g~~~~~~w~~p~~~-----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~ 93 (357)
T 4g56_B 19 YFQSNGSSKGSAWGRPVTA-----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT 93 (357)
T ss_dssp --------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC
T ss_pred EEecCCCccccccCCCCCC-----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC
Confidence 3444456778888875433 347999999999999999999997 56799999876543332 2234568
Q ss_pred ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
...|.+++|+|+++ +++++. |++|++||+.+++......
T Consensus 94 ~~~V~~~~~s~d~~-~l~~s~---dg~v~lWd~~~~~~~~~~~------------------------------------- 132 (357)
T 4g56_B 94 EAGVTDVAWVSEKG-ILVASD---SGAVELWEILEKESLLVNK------------------------------------- 132 (357)
T ss_dssp SSCEEEEEEETTTE-EEEEET---TSCEEEC--------CCCC-------------------------------------
T ss_pred CCCEEEEEEcCCCC-EEEEEC---CCEEEEeeccccceeEEEe-------------------------------------
Confidence 89999999999985 566665 9999999998765321110
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY 239 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~ 239 (488)
....+
T Consensus 133 --------------------------------------------------------------------------~~~~~- 137 (357)
T 4g56_B 133 --------------------------------------------------------------------------FAKYE- 137 (357)
T ss_dssp --------------------------------------------------------------------------EEECC-
T ss_pred --------------------------------------------------------------------------eccCC-
Confidence 01112
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSD 316 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~ 316 (488)
|...|++++|+|++++|+++ +.|+.|++||+++++.+..+.+|...|.+++| ++ .++++++.||.|++||+++++.
T Consensus 138 h~~~V~~v~~spdg~~l~sg-s~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 138 HDDIVKTLSVFSDGTQAVSG-GKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp CSSCEEEEEECSSSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC
T ss_pred CCCCEEEEEECCCCCEEEEE-eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce
Confidence 88899999999999999999 99999999999999999999999999999999 34 5889999999999999988653
Q ss_pred cc-eeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCC-EEEEEccCCCCeE
Q psy14511 317 YP-TAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGR-ELVTSHGKQDCSL 387 (488)
Q Consensus 317 ~~-~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~-~l~~~~g~~~~~i 387 (488)
.. .....+...+.+++|+|++ .+|++++ |+.|++||+++.+....+... ..+|+|++. +|++ |+.|++|
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~las--gs~D~~i 294 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLAS--ISEDCTV 294 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEE--EETTSCE
T ss_pred eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEE--EeCCCEE
Confidence 32 2344567789999999975 6888888 699999999988655444322 128999985 5666 7899999
Q ss_pred EEEeCCCcceeEEEeeccccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCC
Q psy14511 388 KMWEYPRLHLIEELKIHQERILSAVLSP-DQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 388 ~i~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
+|||+++++++..+ +|.+.|++++|+| |+++|++++.||.|++|++.+..
T Consensus 295 ~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 295 AVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 99999999887655 7999999999999 89999999999999999997643
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-43 Score=313.55 Aligned_cols=283 Identities=17% Similarity=0.308 Sum_probs=238.7
Q ss_pred cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511 28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT 106 (488)
Q Consensus 28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~ 106 (488)
+...+.+|.+.|.+++|+|++++|++++ |+.|++||+.++. .+..+..|..+|.+++|+|+++++++++. |++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~ 78 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV---EVRSIQVTETPVRAGKFIARKNWIIVGSD---DFR 78 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEEEGGGTEEEEEET---TSE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---eeEEeeccCCcEEEEEEeCCCCEEEEECC---CCE
Confidence 3467889999999999999999999998 9999999998744 44556789999999999999988877776 999
Q ss_pred EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511 107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP 186 (488)
Q Consensus 107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
|++||+.+++.+..+.
T Consensus 79 i~vwd~~~~~~~~~~~---------------------------------------------------------------- 94 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFE---------------------------------------------------------------- 94 (304)
T ss_dssp EEEEETTTCCEEEEEE----------------------------------------------------------------
T ss_pred EEEEECCCCcEEEEEe----------------------------------------------------------------
Confidence 9999998776432221
Q ss_pred ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511 187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI 266 (488)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i 266 (488)
+ |...|.+++|+|++++++++ +.|++|
T Consensus 95 ---------------------------------------------------~-h~~~v~~~~~~~~~~~l~sg-s~D~~v 121 (304)
T 2ynn_A 95 ---------------------------------------------------A-HPDYIRSIAVHPTKPYVLSG-SDDLTV 121 (304)
T ss_dssp ---------------------------------------------------C-CSSCEEEEEECSSSSEEEEE-ETTSCE
T ss_pred ---------------------------------------------------C-CCCcEEEEEEcCCCCEEEEE-CCCCeE
Confidence 2 77889999999999999999 999999
Q ss_pred EEEECCcc-eeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEcc--CCcEE
Q psy14511 267 DLWHEQEE-RLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP--NGRYL 340 (488)
Q Consensus 267 ~i~d~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l 340 (488)
++||++++ .....+.+|...|.+++| ++..+++|+.|+.|++||++...........|...+..+.|+| ++++|
T Consensus 122 ~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (304)
T 2ynn_A 122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (304)
T ss_dssp EEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEE
T ss_pred EEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEE
Confidence 99999886 556778899999999999 3579999999999999999876555555566778899999987 77899
Q ss_pred EEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc
Q psy14511 341 ASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS 414 (488)
Q Consensus 341 ~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s 414 (488)
++++ |+.|++||+++++....+... ..+|+|+++.+++ |+.|++|++||+.+++++.++..|...+++++|+
T Consensus 202 ~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s--~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~ 279 (304)
T 2ynn_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS--GSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATH 279 (304)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE--EETTSCEEEEETTTCCEEEEECCSSSSEEEEEEC
T ss_pred EEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEE--EcCCCeEEEEECCCCceeeeccCCCccEEEEEEC
Confidence 9999 699999999987654444322 2289999999999 7899999999999999999999999999999999
Q ss_pred CCCC--EEEEEeCCCcEEEEecCC
Q psy14511 415 PDQT--CVAAASADETISIWNCFP 436 (488)
Q Consensus 415 ~~~~--~l~t~~~dg~v~iw~~~~ 436 (488)
|++. ++|+|+.|| +.+|++..
T Consensus 280 ~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 280 PTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp TTCGGGCEEEEETTE-EEEEECC-
T ss_pred CCCCceEEEEecCCc-eEEEEecc
Confidence 9875 577777665 77888765
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.2e-43 Score=312.15 Aligned_cols=283 Identities=23% Similarity=0.475 Sum_probs=241.8
Q ss_pred cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511 28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT 106 (488)
Q Consensus 28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~ 106 (488)
+...+.+|.+.|++++|+|++++|++++ |+.|++|++.+++ ....+.+|...|.+++|+|+++++++++. |+.
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~ 88 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLLVSASD---DKT 88 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEET---TSE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc---cchhhccCCCceEEEEEcCCCCEEEEECC---CCE
Confidence 4456789999999999999999999998 9999999998744 34456789999999999999988877776 999
Q ss_pred EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511 107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP 186 (488)
Q Consensus 107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
|++||+.+++.+..+.
T Consensus 89 i~vwd~~~~~~~~~~~---------------------------------------------------------------- 104 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLK---------------------------------------------------------------- 104 (312)
T ss_dssp EEEEETTTCCEEEEEE----------------------------------------------------------------
T ss_pred EEEEECCCCcEEEEEc----------------------------------------------------------------
Confidence 9999998765432211
Q ss_pred ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511 187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI 266 (488)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i 266 (488)
+ |...|.+++|+|++++++++ +.|+.|
T Consensus 105 ---------------------------------------------------~-~~~~v~~~~~~~~~~~l~s~-~~d~~i 131 (312)
T 4ery_A 105 ---------------------------------------------------G-HSNYVFCCNFNPQSNLIVSG-SFDESV 131 (312)
T ss_dssp ---------------------------------------------------C-CSSCEEEEEECSSSSEEEEE-ETTSCE
T ss_pred ---------------------------------------------------C-CCCCEEEEEEcCCCCEEEEE-eCCCcE
Confidence 1 67789999999999999999 999999
Q ss_pred EEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511 267 DLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS 344 (488)
Q Consensus 267 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 344 (488)
++||+++++.+..+..|..++.+++| +++++++++.||.|++||+++++........+..++..++|+|++++|++++
T Consensus 132 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 132 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 99999999999999999999999999 6899999999999999999987544444556777899999999999999999
Q ss_pred -cCeEEEEECCCCCCCccccee-------eeee-cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511 345 -NNTVKIWDFRQLDAKRPLGLI-------VPKL-KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP 415 (488)
Q Consensus 345 -d~~i~iwd~~~~~~~~~~~~~-------~~~~-~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~ 415 (488)
|+.|++||+++.+....+... ...+ .++++++++ |+.|+.|++||+.+++.+..+.+|...|.+++|+|
T Consensus 212 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p 289 (312)
T 4ery_A 212 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS--GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 289 (312)
T ss_dssp TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEE--CCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEE--ECCCCEEEEEECCCchhhhhhhccCCcEEEEeecC
Confidence 699999999987543332211 1133 367888888 89999999999999999999999999999999999
Q ss_pred CCCEEEEEe--CCCcEEEEecC
Q psy14511 416 DQTCVAAAS--ADETISIWNCF 435 (488)
Q Consensus 416 ~~~~l~t~~--~dg~v~iw~~~ 435 (488)
++++|++++ .|+.|++|+.+
T Consensus 290 ~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 290 TENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSSEEEEEECTTTCCEEEEECC
T ss_pred cCCceEEEEccCCccEEEecCC
Confidence 999999997 69999999864
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-44 Score=321.16 Aligned_cols=293 Identities=19% Similarity=0.323 Sum_probs=232.9
Q ss_pred ceeecccCc-eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511 29 PTAITREGD-VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT 106 (488)
Q Consensus 29 ~~~~~~h~~-~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~ 106 (488)
...+.+|.+ .|.+++|+|+|++||+|+ |+.|+|||+.++..........+|...|.+++|+|++++|++++. |++
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~---D~~ 84 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF---DAT 84 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET---TSC
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC---CCc
Confidence 356778987 999999999999999998 999999999865322222234689999999999999998877776 999
Q ss_pred EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511 107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP 186 (488)
Q Consensus 107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
+++|++..+...
T Consensus 85 v~iw~~~~~~~~-------------------------------------------------------------------- 96 (345)
T 3fm0_A 85 TCIWKKNQDDFE-------------------------------------------------------------------- 96 (345)
T ss_dssp EEEEEECCC-EE--------------------------------------------------------------------
T ss_pred EEEEEccCCCeE--------------------------------------------------------------------
Confidence 999998654310
Q ss_pred ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511 187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI 266 (488)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i 266 (488)
....+.+ |...|.+++|+|++++|+++ +.|+.|
T Consensus 97 ---------------------------------------------~~~~~~~-h~~~v~~v~~sp~~~~l~s~-s~D~~v 129 (345)
T 3fm0_A 97 ---------------------------------------------CVTTLEG-HENEVKSVAWAPSGNLLATC-SRDKSV 129 (345)
T ss_dssp ---------------------------------------------EEEEECC-CSSCEEEEEECTTSSEEEEE-ETTSCE
T ss_pred ---------------------------------------------EEEEccC-CCCCceEEEEeCCCCEEEEE-ECCCeE
Confidence 1112223 88899999999999999999 999999
Q ss_pred EEEECCcc---eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEE
Q psy14511 267 DLWHEQEE---RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYL 340 (488)
Q Consensus 267 ~i~d~~~~---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l 340 (488)
++||+..+ ..+..+..|...|.+++| ++++|++++.|+.|++||.+... .....+.+|...|.+++|+|++++|
T Consensus 130 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l 209 (345)
T 3fm0_A 130 WVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRL 209 (345)
T ss_dssp EEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEE
Confidence 99999765 456677889999999999 68999999999999999998753 2446788999999999999999999
Q ss_pred EEEe-cCeEEEEECCCCCCCccc---------------------ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcc--
Q psy14511 341 ASGS-NNTVKIWDFRQLDAKRPL---------------------GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH-- 396 (488)
Q Consensus 341 ~~~~-d~~i~iwd~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~-- 396 (488)
++++ |+.|++||.........+ .....+|+|++..+++ ++.|+.|++|+.....
T Consensus 210 ~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s--~~~d~~i~vw~~~~~~~~ 287 (345)
T 3fm0_A 210 ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT--ACGDDAIRVFQEDPNSDP 287 (345)
T ss_dssp EEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEE--EETTSCEEEEEECTTSCT
T ss_pred EEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEE--EeCCCeEEEEEeCCCCCc
Confidence 9999 699999997433221110 0112289999999999 6789999999986542
Q ss_pred --e-----eEEEeeccccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCccc
Q psy14511 397 --L-----IEELKIHQERILSAVLSPDQ-TCVAAASADETISIWNCFPRDKKR 441 (488)
Q Consensus 397 --~-----~~~~~~~~~~v~~~~~s~~~-~~l~t~~~dg~v~iw~~~~~~~~~ 441 (488)
+ .....+|...|++++|+|++ .+||+|+.||.|++|++.++++..
T Consensus 288 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 288 QQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp TSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred ceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence 1 12235789999999999998 499999999999999999887653
No 18
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-43 Score=352.77 Aligned_cols=388 Identities=11% Similarity=0.086 Sum_probs=264.5
Q ss_pred CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCC-Cc-------cc
Q psy14511 5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR-PQ-------VN 75 (488)
Q Consensus 5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~-~~-------~~ 75 (488)
|++||+++.|++|+|||+.+++.+. .+. |.+.|++++|+|++++|++|+ |+.|++||+++++... .+ ..
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~~~-~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKVLT-TVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFF 146 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSEEE-EEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTC
T ss_pred CCEEEEEECcCeEEEEECCCCcEEE-EEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccc
Confidence 6789999999999999999887553 343 668899999999999999998 9999999998754310 00 23
Q ss_pred ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511 76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155 (488)
Q Consensus 76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (488)
+.+|.++|.+++|+|++..+++++.. |+.| +||+.+++....+..+..+... .. .
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~--dg~v-lWd~~~~~~~~~~~~~~~~g~~-----~~-----------------~ 201 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYE--YVTL-TYSLVENEIKQSFIYELPPFAP-----GG-----------------D 201 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECS--SCEE-EEETTTTEEEEEECCCBCTTCC-----CS-----------------T
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeC--CCcE-EEECCCCceEEEEecccCCcCC-----Cc-----------------c
Confidence 57799999999999975445555553 9999 9999999877666543110000 00 0
Q ss_pred cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEEEECCCeEEEEECCCCceEEE
Q psy14511 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVALDTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~iw~~~~~~~~~~ 233 (488)
.. . .........+.++.|++ ..+++++.|+.|++||+.+++....
T Consensus 202 ------------------------------~~--~-~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 202 ------------------------------FS--E-KTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp ------------------------------TC--C-CTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred ------------------------------cc--c-ccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 00 0 00000112345566654 4577888999999999999887654
Q ss_pred EecC---C------------CCCCceEEEEEc----CCCCeEEEEeCC--------------------------------
Q psy14511 234 VEYP---T------------YDNAYISCVAWK----PRTTDLAVTNTC-------------------------------- 262 (488)
Q Consensus 234 ~~~~---~------------~~~~~i~~~~~~----~~~~~l~~~~~~-------------------------------- 262 (488)
..+. . .+...|++++|+ |++..++++++.
T Consensus 249 r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~ 328 (902)
T 2oaj_A 249 RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYY 328 (902)
T ss_dssp ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHH
T ss_pred EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhh
Confidence 2221 1 024478888884 443233332222
Q ss_pred --------------------------------------------CCcEEEEECCcceeeee-------eccccccEEEEE
Q psy14511 263 --------------------------------------------TEYIDLWHEQEERLIQK-------LRTHMHQVIAMC 291 (488)
Q Consensus 263 --------------------------------------------~~~i~i~d~~~~~~~~~-------~~~~~~~v~~~~ 291 (488)
|+.|++||+.++..... +..|...|++++
T Consensus 329 ~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~ 408 (902)
T 2oaj_A 329 ANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSM 408 (902)
T ss_dssp HSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEE
T ss_pred cCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEE
Confidence 23344444433321111 122334444433
Q ss_pred e------------------------------------cCCEEEEeecCCeEEEEECcCCCccc-eee---------ecCC
Q psy14511 292 W------------------------------------NGNLLSCGTIGGNILHYDVRTHSDYP-TAI---------TREG 325 (488)
Q Consensus 292 ~------------------------------------~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~---------~~~~ 325 (488)
+ +++.|++|+.|++|++||+..+.... ..+ .+|.
T Consensus 409 ~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~ 488 (902)
T 2oaj_A 409 AASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKE 488 (902)
T ss_dssp EEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSS
T ss_pred EEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCC
Confidence 3 46799999999999999998763110 111 1788
Q ss_pred ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCC------------------------------------------ccc
Q psy14511 326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK------------------------------------------RPL 362 (488)
Q Consensus 326 ~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~------------------------------------------~~~ 362 (488)
..|.+++|+|++++||+++ |++|++||+.+.+.. +.+
T Consensus 489 ~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 568 (902)
T 2oaj_A 489 LAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPS 568 (902)
T ss_dssp CCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEE
T ss_pred CceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcccee
Confidence 8999999999999999999 699999999765210 001
Q ss_pred cee--------eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE-----EEe-eccccEEEEEEc-----CCC---CEE
Q psy14511 363 GLI--------VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE-----ELK-IHQERILSAVLS-----PDQ---TCV 420 (488)
Q Consensus 363 ~~~--------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~-----~~~-~~~~~v~~~~~s-----~~~---~~l 420 (488)
..+ ..+|+||| +|++ |+.|++|++||+++...+. .+. +|.+.|++++|+ ||| ++|
T Consensus 569 ~~l~~h~~~V~svafSpdG-~lAs--gs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l 645 (902)
T 2oaj_A 569 TAVHANKGKTSAINNSNIG-FVGI--AYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILM 645 (902)
T ss_dssp EEECCCSCSEEEEEECBTS-EEEE--EETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEE
T ss_pred EEEEcCCCcEEEEEecCCc-EEEE--EeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEE
Confidence 111 11899999 8888 8899999999998877654 232 888999999999 885 899
Q ss_pred EEEeCCCcEEEEec---CCCCcc-ccccc-----cCCcceEE-ee
Q psy14511 421 AAASADETISIWNC---FPRDKK-RKARQ-----VGSGSSLE-FA 455 (488)
Q Consensus 421 ~t~~~dg~v~iw~~---~~~~~~-~~~~~-----~~~v~~~~-~s 455 (488)
++|+.|++|++||+ .+++.. .+.+| .++|.++. |+
T Consensus 646 ~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~ 690 (902)
T 2oaj_A 646 VCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFS 690 (902)
T ss_dssp EEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEE
T ss_pred EEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEe
Confidence 99999999999999 666644 22223 46676666 66
No 19
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.1e-43 Score=354.37 Aligned_cols=358 Identities=16% Similarity=0.210 Sum_probs=292.2
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+.||++||+|+.||.|+|||+.+++.+ ..+.+|..+|.+++|+|++++|++++ |+.|++||+.+++ .+..+.+|.
T Consensus 22 sp~~~~la~~~~~g~v~iwd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~ 97 (814)
T 3mkq_A 22 HPTEPWVLTTLYSGRVEIWNYETQVEV-RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE---KVVDFEAHP 97 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEE-EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC---EEEEEECCS
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCceE-EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEEEEecCC
Confidence 348999999999999999999988744 66789999999999999999999998 9999999998754 445567899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCC-eeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG-KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
+.|++++|+|+++++++++. |+.|++||+.++ .....+..+...+..
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~~~v~~----------------------------- 145 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGHEHFVMC----------------------------- 145 (814)
T ss_dssp SCEEEEEECSSSSEEEEEET---TSEEEEEEGGGTSEEEEEEECCSSCEEE-----------------------------
T ss_pred CCEEEEEEeCCCCEEEEEcC---CCEEEEEECCCCceEEEEEcCCCCcEEE-----------------------------
Confidence 99999999999998887776 999999999876 444444444332222
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC---CcEEEEECCCeEEEEECCCCceEEEEec
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY---HDTLAVALDTSVYTWNTKTNKTQLLVEY 236 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iw~~~~~~~~~~~~~ 236 (488)
+.|++ ..+++++.|+.|++||+.++........
T Consensus 146 --------------------------------------------~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 146 --------------------------------------------VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp --------------------------------------------EEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred --------------------------------------------EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence 33332 3577788999999999988876655543
Q ss_pred CCCCCCceEEEEEcC--CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511 237 PTYDNAYISCVAWKP--RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR 312 (488)
Q Consensus 237 ~~~~~~~i~~~~~~~--~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 312 (488)
. +...+.+++|+| ++++++++ +.+|.|++||+.+++.+..+.+|...+.+++| +++++++++.||.|++||+.
T Consensus 182 ~--~~~~v~~~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 182 G--QERGVNYVDYYPLPDKPYMITA-SDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp C--CTTCCCEEEECCSTTCCEEEEE-CTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred C--CCCCEEEEEEEECCCCCEEEEE-eCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 2 557899999999 99999999 99999999999999999999999999999999 68899999999999999998
Q ss_pred CCCccceeeecCCccEEEEEEccCCc--EEEEEecCeEEEEECCCCCCCcccc---------------------------
Q psy14511 313 THSDYPTAITREGDVVCGLKWSPNGR--YLASGSNNTVKIWDFRQLDAKRPLG--------------------------- 363 (488)
Q Consensus 313 ~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~d~~i~iwd~~~~~~~~~~~--------------------------- 363 (488)
++ .....+..|...+.+++|+|+++ +++++.++.+.+|++........+.
T Consensus 259 ~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 337 (814)
T 3mkq_A 259 TY-KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNE 337 (814)
T ss_dssp TC-SEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCC
T ss_pred CC-cEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeeccccc
Confidence 85 46777888889999999999997 6777778889999976432111000
Q ss_pred ---------------------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEE
Q psy14511 364 ---------------------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAA 422 (488)
Q Consensus 364 ---------------------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t 422 (488)
....+|+|+|++++++ + ++.+.+|++...... +.+.+.+++|+||+++||+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~--~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~ 409 (814)
T 3mkq_A 338 EVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVV--G-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYAL 409 (814)
T ss_dssp CCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEE--E-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEE
T ss_pred ccccCccceeeeecCCCCccCCceeEECCCCCEEEEe--c-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEE
Confidence 0112899999999984 4 899999998654332 3567889999999999999
Q ss_pred EeCCCcEEEEecCCCCccccccccCCcceEEeecCC
Q psy14511 423 ASADETISIWNCFPRDKKRKARQVGSGSSLEFAILK 458 (488)
Q Consensus 423 ~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~ 458 (488)
++.||.|++|+. ...+...+.++.|+|++
T Consensus 410 ~~~~g~v~l~~~-------~~~~~~~v~~~~~s~dg 438 (814)
T 3mkq_A 410 IDETGQIKYYKN-------FKEVTSWSVPMHSAIDR 438 (814)
T ss_dssp ECTTCCEEEEET-------TEECTTCCCCCSSCCCE
T ss_pred EeCCCcEEEEEC-------CCCccceEEcCCcCccc
Confidence 999999999963 23456778889999987
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.6e-43 Score=312.56 Aligned_cols=284 Identities=16% Similarity=0.228 Sum_probs=237.7
Q ss_pred ceeecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCc--CCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511 29 PTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDA--KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD 104 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d 104 (488)
...+.+|.+.|++++|+|++ ++|++|+ |++|++|++.+... ..++..+.+|...|.+++|+|+++++++++. |
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~---D 86 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW---D 86 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET---T
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC---C
Confidence 45688999999999999965 8999998 99999999975332 2245567899999999999999998888776 9
Q ss_pred ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511 105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA 184 (488)
Q Consensus 105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
++|++||+.+++....+.
T Consensus 87 ~~v~~wd~~~~~~~~~~~-------------------------------------------------------------- 104 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFV-------------------------------------------------------------- 104 (319)
T ss_dssp SEEEEEETTTTEEEEEEE--------------------------------------------------------------
T ss_pred CEEEEEECCCCCeeEEEc--------------------------------------------------------------
Confidence 999999998876432221
Q ss_pred CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC
Q psy14511 185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE 264 (488)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 264 (488)
+ |...|.+++|+|++.+++++ +.|+
T Consensus 105 -----------------------------------------------------~-h~~~v~~~~~~~~~~~l~s~-s~D~ 129 (319)
T 3frx_A 105 -----------------------------------------------------G-HKSDVMSVDIDKKASMIISG-SRDK 129 (319)
T ss_dssp -----------------------------------------------------C-CSSCEEEEEECTTSCEEEEE-ETTS
T ss_pred -----------------------------------------------------c-CCCcEEEEEEcCCCCEEEEE-eCCC
Confidence 2 77889999999999999999 9999
Q ss_pred cEEEEECCcceeeeeeccccccEEEEEec--------CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccC
Q psy14511 265 YIDLWHEQEERLIQKLRTHMHQVIAMCWN--------GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN 336 (488)
Q Consensus 265 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~ 336 (488)
.|++||++. +++..+.+|...+.++.+. +..+++++.|+.|++||+++. .....+.+|...|.+++|+|+
T Consensus 130 ~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 130 TIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF-QIEADFIGHNSNINTLTASPD 207 (319)
T ss_dssp CEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT-EEEEEECCCCSCEEEEEECTT
T ss_pred eEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc-hhheeecCCCCcEEEEEEcCC
Confidence 999999974 6777888999999999982 348999999999999999875 466778899999999999999
Q ss_pred CcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee--------
Q psy14511 337 GRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI-------- 403 (488)
Q Consensus 337 ~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-------- 403 (488)
+++|++++ |+.|++||+.+.+....+... ..+|+|++.+++++ . +..+++|++.....+..+..
T Consensus 208 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~--~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 284 (319)
T 3frx_A 208 GTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAA--T-ATGIKVFSLDPQYLVDDLRPEFAGYSKA 284 (319)
T ss_dssp SSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEE--E-TTEEEEEEETTEEEEEEECCCCTTCCGG
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEE--c-CCCcEEEEeCcCeeeeccCccccccccC
Confidence 99999999 699999999987544333221 22999999999983 3 45699999998877766643
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511 404 HQERILSAVLSPDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 404 ~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
|...+.+++|+|||++|++|+.||.|++||+.++
T Consensus 285 ~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 285 AEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp GCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 4567999999999999999999999999998764
No 21
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.4e-43 Score=315.20 Aligned_cols=296 Identities=15% Similarity=0.194 Sum_probs=224.3
Q ss_pred EEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccC--------cCCCcccccccccceeEEEE
Q psy14511 17 ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLD--------AKRPQVNNQCHLSAVKAIAW 88 (488)
Q Consensus 17 i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~--------~~~~~~~~~~h~~~v~~l~~ 88 (488)
.+.|++.... ...|...|.+++|+|||++|++++|+++++||..... ..........|...|.+++|
T Consensus 16 ~r~w~~~~~~-----~~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (344)
T 4gqb_B 16 AREWNLPPNA-----PACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW 90 (344)
T ss_dssp -------CCS-----CSSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE
T ss_pred ccccCCCCCC-----cccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE
Confidence 4567765433 2356778999999999999999998888888743210 00111112336678999999
Q ss_pred ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccc
Q psy14511 89 CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSP 168 (488)
Q Consensus 89 ~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (488)
+|++ .+++++. ||+|++||+.+++......
T Consensus 91 s~d~-~l~~~s~---dg~v~lWd~~~~~~~~~~~---------------------------------------------- 120 (344)
T 4gqb_B 91 VGER-GILVASD---SGAVELWELDENETLIVSK---------------------------------------------- 120 (344)
T ss_dssp ETTT-EEEEEET---TSEEEEEEECTTSSCEEEE----------------------------------------------
T ss_pred eCCC-eEEEEEC---CCEEEEEeccCCCceeEee----------------------------------------------
Confidence 9986 5676665 9999999998776432211
Q ss_pred eeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEE
Q psy14511 169 TQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA 248 (488)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~ 248 (488)
....+ |...|++++
T Consensus 121 -----------------------------------------------------------------~~~~~-H~~~V~~v~ 134 (344)
T 4gqb_B 121 -----------------------------------------------------------------FCKYE-HDDIVSTVS 134 (344)
T ss_dssp -----------------------------------------------------------------EEEEC-CSSCEEEEE
T ss_pred -----------------------------------------------------------------ccccC-CCCCEEEEE
Confidence 11122 888999999
Q ss_pred EcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCccceee--ec
Q psy14511 249 WKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDYPTAI--TR 323 (488)
Q Consensus 249 ~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~ 323 (488)
|+|++++|+++ +.|+.|++||+++++++..+.+|...|.+++| ++ .++++++.|+.|++||+++++ ....+ ..
T Consensus 135 ~spdg~~l~sg-s~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~ 212 (344)
T 4gqb_B 135 VLSSGTQAVSG-SKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-PASQIGCSA 212 (344)
T ss_dssp ECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-CEEECC---
T ss_pred ECCCCCEEEEE-eCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc-eeeeeecce
Confidence 99999999999 99999999999999999999999999999999 44 578999999999999999865 33333 34
Q ss_pred CCccEEEEEEccC-CcEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCC-EEEEEccCCCCeEEEEeCCCc
Q psy14511 324 EGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGR-ELVTSHGKQDCSLKMWEYPRL 395 (488)
Q Consensus 324 ~~~~i~~~~~s~~-~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~-~l~~~~g~~~~~i~i~d~~~~ 395 (488)
+...+.+++|+|+ +++|++++ |+.|++||+++++....+... ..+|+|++. +|++ |+.|++|++||+.++
T Consensus 213 ~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~las--gs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 213 PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLAS--LSEDCSLAVLDSSLS 290 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEE--EETTSCEEEECTTCC
T ss_pred eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEE--EeCCCeEEEEECCCC
Confidence 5567899999995 57888888 699999999988665544332 128999985 6777 789999999999988
Q ss_pred ceeEEEeeccccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCC
Q psy14511 396 HLIEELKIHQERILSAVLSPDQT-CVAAASADETISIWNCFPRD 438 (488)
Q Consensus 396 ~~~~~~~~~~~~v~~~~~s~~~~-~l~t~~~dg~v~iw~~~~~~ 438 (488)
+++ .+.+|.+.|++++|+|+++ +|++++.||+|++|++.+..
T Consensus 291 ~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 291 ELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred cEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 765 5789999999999999986 57799999999999998754
No 22
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.3e-43 Score=342.53 Aligned_cols=381 Identities=14% Similarity=0.195 Sum_probs=288.4
Q ss_pred CCc-eEEEeecCCeEEEEEcccCcccceeecccCc---eEEEEEEccC-CcEEEEec-CCeEEEEeccccCcCCCcccc-
Q psy14511 4 NGN-LLSCGTIGGNILHYDVRTHSDYPTAITREGD---VVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAKRPQVNN- 76 (488)
Q Consensus 4 dg~-~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~---~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~~~~~~~~~- 76 (488)
+++ +|++++.||.|++||+.+++.+ ..+.+|.. .|.+++|+|+ +++|++++ |+.|++||+.+++. +..+
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~ 246 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPFKFS-ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF---LKYIE 246 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBEEE-EEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE---EEECC
T ss_pred CCCcEEEEEeCCCcEEEEeCCCccee-eeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE---eEEec
Confidence 565 8999999999999999888744 56788998 9999999999 99999998 99999999987543 3334
Q ss_pred c---ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511 77 Q---CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153 (488)
Q Consensus 77 ~---~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (488)
. +|...|.+++|+ +++++++++. |+.|++||+.+++.+..+..+...................+...
T Consensus 247 ~~~~~~~~~v~~~~~~-~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------ 316 (615)
T 1pgu_A 247 DDQEPVQGGIFALSWL-DSQKFATVGA---DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS------ 316 (615)
T ss_dssp BTTBCCCSCEEEEEES-SSSEEEEEET---TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE------
T ss_pred ccccccCCceEEEEEc-CCCEEEEEcC---CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE------
Confidence 4 799999999999 8888887776 99999999999998887776532111111100000111111110
Q ss_pred cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~ 233 (488)
.++.+..+.... ......+ ......+..+.+ ++ +++++.|+.|++|++. .
T Consensus 317 ~~g~i~~~d~~~------------------~~~~~~~----~~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~---~--- 366 (615)
T 1pgu_A 317 LDGTLNFYELGH------------------DEVLKTI----SGHNKGITALTV-NP-LISGSYDGRIMEWSSS---S--- 366 (615)
T ss_dssp TTSCEEEEETTE------------------EEEEEEE----CCCSSCEEEEET-TT-TEEEETTSCEEETTTT---E---
T ss_pred CCCCEEEEECCC------------------CcEEEEE----eCCCCCEEEEEe-cC-cEEECCCCeEEEEEch---h---
Confidence 011111110000 0000000 012345778999 77 9999999999999998 1
Q ss_pred EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----------------------------------eeeee
Q psy14511 234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----------------------------------RLIQK 279 (488)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----------------------------------~~~~~ 279 (488)
+. .. |...|.+++| ++++.++++ +.|+.+++||+.++ +.+..
T Consensus 367 ~~-~~-~~~~v~~~~~-~~~~~l~~~-~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (615)
T 1pgu_A 367 MH-QD-HSNLIVSLDN-SKAQEYSSI-SWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKS 442 (615)
T ss_dssp EE-CC-CCSCEEEEEC-CSTTCCEEE-ETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred hc-Cc-ccCceEEEEE-CCCcEEEEE-eCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeee
Confidence 22 33 8889999999 656788888 88999999887642 23333
Q ss_pred eccccccEEEEEecCCEEEEeec-CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC
Q psy14511 280 LRTHMHQVIAMCWNGNLLSCGTI-GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD 357 (488)
Q Consensus 280 ~~~~~~~v~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~ 357 (488)
+. +...+.++++.++++++++. |+.|++||+.........+..|...|.+++|+|++++|++++ |+.|++||+.+++
T Consensus 443 ~~-~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 521 (615)
T 1pgu_A 443 VR-LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE 521 (615)
T ss_dssp EE-CSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred cc-cCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc
Confidence 32 67788999999999999999 999999999875322156778999999999999999999999 6999999999886
Q ss_pred CCcccce-e-----eeeecC----------CCCEEEEEccCCCCeEEEEeCCCc-ceeEEEeeccccEEEEEEcCCCCEE
Q psy14511 358 AKRPLGL-I-----VPKLKR----------EGRELVTSHGKQDCSLKMWEYPRL-HLIEELKIHQERILSAVLSPDQTCV 420 (488)
Q Consensus 358 ~~~~~~~-~-----~~~~~~----------~~~~l~~~~g~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l 420 (488)
....+.. . ..+|+| ++++|++ ++.|+.|++||+.++ +++..+.+|...|++++|+|+++ |
T Consensus 522 ~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~--~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l 598 (615)
T 1pgu_A 522 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVAT--GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-L 598 (615)
T ss_dssp EEECCSCCCSSCEEEEEECCCC------CCSCCEEEE--EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-E
T ss_pred ceeEeecCCCCceeEEEEcCccccccccccCCCEEEE--EcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-e
Confidence 6554432 1 229999 9999999 789999999999998 78889999999999999999999 9
Q ss_pred EEEeCCCcEEEEecCC
Q psy14511 421 AAASADETISIWNCFP 436 (488)
Q Consensus 421 ~t~~~dg~v~iw~~~~ 436 (488)
++++.||.|++|++..
T Consensus 599 ~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 599 VSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTSCEEEEEEC-
T ss_pred EEecCCceEEEEeeec
Confidence 9999999999999875
No 23
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.8e-43 Score=322.54 Aligned_cols=270 Identities=17% Similarity=0.300 Sum_probs=231.6
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+.++++||+|+.||+|+|||+.+++. ...+.+|.+.|.+++|+|++++|++|+ |++|++||+.++ ..+..+.+|.
T Consensus 117 ~p~~~~l~s~s~Dg~i~vwd~~~~~~-~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~---~~~~~~~~h~ 192 (410)
T 1vyh_C 117 HPVFSVMVSASEDATIKVWDYETGDF-ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF---ECIRTMHGHD 192 (410)
T ss_dssp CSSSSEEEEEESSSCEEEEETTTCCC-CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS---CEEECCCCCS
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcE-EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---ceeEEEcCCC
Confidence 34789999999999999999999884 467899999999999999999999998 999999999874 3455678899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
..|.+++|+|+++++++++. |++|++||+.++.++..+..+...+..+.+.+
T Consensus 193 ~~V~~v~~~p~~~~l~s~s~---D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~------------------------- 244 (410)
T 1vyh_C 193 HNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ------------------------- 244 (410)
T ss_dssp SCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECT-------------------------
T ss_pred CCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEeCCCccEEEEEECC-------------------------
Confidence 99999999999988877776 99999999999988877766533222211111
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~ 240 (488)
++..+++++.|+.|++||+.+++....+.. |
T Consensus 245 ----------------------------------------------~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~---h 275 (410)
T 1vyh_C 245 ----------------------------------------------DGTLIASCSNDQTVRVWVVATKECKAELRE---H 275 (410)
T ss_dssp ----------------------------------------------TSSEEEEEETTSCEEEEETTTCCEEEEECC---C
T ss_pred ----------------------------------------------CCCEEEEEcCCCeEEEEECCCCceeeEecC---C
Confidence 224577888999999999999887665543 8
Q ss_pred CCceEEEEEcCC--------------------CCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEE
Q psy14511 241 NAYISCVAWKPR--------------------TTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLS 298 (488)
Q Consensus 241 ~~~i~~~~~~~~--------------------~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 298 (488)
...|.+++|+|+ +.+++++ +.|+.|++||+++++++..+.+|...|.+++| ++++|+
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg-s~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~ 354 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG-SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE-eCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE
Confidence 899999999996 5678888 99999999999999999999999999999999 689999
Q ss_pred EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511 299 CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354 (488)
Q Consensus 299 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~ 354 (488)
+++.||.|++||+.++ .....+..|...|.+++|+|++.+|++++ |+.|++|+++
T Consensus 355 s~s~D~~i~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 355 SCADDKTLRVWDYKNK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEETTTEEEEECCTTS-CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEeCCCeEEEEECCCC-ceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999999875 57788899999999999999999999999 6999999864
No 24
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-42 Score=323.20 Aligned_cols=344 Identities=12% Similarity=0.211 Sum_probs=260.2
Q ss_pred ccCCc-eEEEeecCCeEEEEEc----ccCcc-----cceeecc----------cCceEEEEEEccCCcEEEEec-CCeEE
Q psy14511 2 CWNGN-LLSCGTIGGNILHYDV----RTHSD-----YPTAITR----------EGDVVCGLKWSPNGRYLASGS-NNTVK 60 (488)
Q Consensus 2 ~~dg~-~la~g~~dg~i~iwd~----~~~~~-----~~~~~~~----------h~~~V~~l~~sp~g~~las~~-d~~i~ 60 (488)
+.||+ +||+|+.||.|++||+ .+++. ....+.. |.+.|++++|+|++++|++++ |+.|+
T Consensus 54 s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 133 (425)
T 1r5m_A 54 NPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELR 133 (425)
T ss_dssp CSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEE
Confidence 34788 9999999999999999 77662 1222222 688999999999999999998 99999
Q ss_pred EEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccccc
Q psy14511 61 IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKK 140 (488)
Q Consensus 61 vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (488)
+||.. ...+..+.+|...|.+++|+|+++++++++. |+.|++||+.+++.+..+..+............
T Consensus 134 i~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---- 202 (425)
T 1r5m_A 134 LWNKT----GALLNVLNFHRAPIVSVKWNKDGTHIISMDV---ENVTILWNVISGTVMQHFELKETGGSSINAENH---- 202 (425)
T ss_dssp EEETT----SCEEEEECCCCSCEEEEEECTTSSEEEEEET---TCCEEEEETTTTEEEEEECCC----------------
T ss_pred EEeCC----CCeeeeccCCCccEEEEEECCCCCEEEEEec---CCeEEEEECCCCcEEEEeeccccCccceeeccc----
Confidence 99933 2344557789999999999999998888776 999999999999887766554321100000000
Q ss_pred ceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-CCcEEEEECCCe
Q psy14511 141 RRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-YHDTLAVALDTS 219 (488)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~ 219 (488)
......+..+.|. ++.+++++.++.
T Consensus 203 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~ 228 (425)
T 1r5m_A 203 ------------------------------------------------------SGDGSLGVDVEWVDDDKFVIPGPKGA 228 (425)
T ss_dssp ---------------------------------------------------------CCCBSCCEEEETTEEEEECGGGC
T ss_pred ------------------------------------------------------cCCcceeeEEEEcCCCEEEEEcCCCe
Confidence 0000011223332 356777889999
Q ss_pred EEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEE
Q psy14511 220 VYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLL 297 (488)
Q Consensus 220 v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l 297 (488)
|++||+.+++....+.. |...|.+++|+|++++++++ +.|+.|++||+++++.+..+..|...+.+++| ++ .+
T Consensus 229 i~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 303 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIG---HHGPISVLEFNDTNKLLLSA-SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KV 303 (425)
T ss_dssp EEEEETTCSSCSEEECC---CSSCEEEEEEETTTTEEEEE-ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EE
T ss_pred EEEEEcCCCceeeeecc---CCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EE
Confidence 99999999877666553 88899999999999999999 89999999999999999999999999999999 45 99
Q ss_pred EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEE
Q psy14511 298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGREL 376 (488)
Q Consensus 298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l 376 (488)
++++.|+.|++||+++. .....+..|...|.+++|+|++++|++++ |+.|++||+.+.+.... .+
T Consensus 304 ~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~-------------~~ 369 (425)
T 1r5m_A 304 ISCSMDGSVRLWSLKQN-TLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSR-------------SL 369 (425)
T ss_dssp EEEETTSEEEEEETTTT-EEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC------------------
T ss_pred EEEeCCCcEEEEECCCC-cEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCcccee-------------ee
Confidence 99999999999999885 46777888899999999999999999999 59999999976531110 00
Q ss_pred EEEccCCCCeEEEEeCCCcceeEEEeeccc--cEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511 377 VTSHGKQDCSLKMWEYPRLHLIEELKIHQE--RILSAVLSPDQTCVAAASADETISIWNCF 435 (488)
Q Consensus 377 ~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~t~~~dg~v~iw~~~ 435 (488)
. +..++. +.....+++..+.+|.. .|++++|+|++++|++++.||.|++|+++
T Consensus 370 ~---~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 370 Y---GNRDGI---LNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ---------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred e---cccccc---cCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 0 122222 22223456788888976 99999999999999999999999999986
No 25
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.7e-42 Score=311.20 Aligned_cols=306 Identities=17% Similarity=0.244 Sum_probs=236.1
Q ss_pred ceeecccCceEEEEEE-----cc-CCcEEEEec-CCeEEEEeccccCcC----CCcccccccccceeEEEEecCCCeEEe
Q psy14511 29 PTAITREGDVVCGLKW-----SP-NGRYLASGS-NNTVKIWDFRQLDAK----RPQVNNQCHLSAVKAIAWCPWEPTLLA 97 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~-----sp-~g~~las~~-d~~i~vwd~~~~~~~----~~~~~~~~h~~~v~~l~~~~~~~~l~~ 97 (488)
...+.+|.+.|++++| +| ++++|++|+ |++|++||+.+.+.. .+...+.+|...|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 3568899999999999 77 999999999 999999999754321 234457889999999999999988777
Q ss_pred eeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccc
Q psy14511 98 TGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGK 177 (488)
Q Consensus 98 ~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (488)
++. |++|++||+.+++.+..+..+...+..+.+++
T Consensus 94 ~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp------------------------------------------ 128 (343)
T 2xzm_R 94 SSW---DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP------------------------------------------ 128 (343)
T ss_dssp EET---TSEEEEEETTSSCEEEEEECCCSCEEEEEECS------------------------------------------
T ss_pred EcC---CCcEEEEECCCCcEEEEEcCCCCcEEEEEECC------------------------------------------
Confidence 776 99999999999988877776644333333222
Q ss_pred ccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC----
Q psy14511 178 LPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT---- 253 (488)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---- 253 (488)
.+..+++++.|+.|++||+............+ |...+.+++|+|++
T Consensus 129 -----------------------------~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~ 178 (343)
T 2xzm_R 129 -----------------------------DNRQILSAGAEREIKLWNILGECKFSSAEKEN-HSDWVSCVRYSPIMKSAN 178 (343)
T ss_dssp -----------------------------STTEEEEEETTSCEEEEESSSCEEEECCTTTS-CSSCEEEEEECCCCCSCS
T ss_pred -----------------------------CCCEEEEEcCCCEEEEEeccCCceeeeecccC-CCceeeeeeecccccccc
Confidence 22468888899999999998543333222234 88899999999987
Q ss_pred ------CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCC
Q psy14511 254 ------TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325 (488)
Q Consensus 254 ------~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 325 (488)
.+++++ +.|+.|++||. ..+....+.+|...|.+++| ++++|++|+.||.|++||+.........+ .+.
T Consensus 179 ~~~~~~~~l~s~-~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~ 255 (343)
T 2xzm_R 179 KVQPFAPYFASV-GWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF-DAG 255 (343)
T ss_dssp CCCSSCCEEEEE-ETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE-ECS
T ss_pred ccCCCCCEEEEE-cCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee-cCC
Confidence 678888 99999999994 45677788899999999999 78999999999999999996544444443 345
Q ss_pred ccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511 326 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ 405 (488)
Q Consensus 326 ~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~ 405 (488)
..|.+++|+|++++++++.|+.+++||+.+.+... +..+............+|.
T Consensus 256 ~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~ 309 (343)
T 2xzm_R 256 STINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAP--------------------------VCTIEAEPITKAEGQKGKN 309 (343)
T ss_dssp SCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCS--------------------------EEECCCCSGGGBTTBCCSC
T ss_pred CcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCc--------------------------eEEeecCcchhhhhhcCCC
Confidence 56999999999999998888889999997653211 0000000001111234688
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511 406 ERILSAVLSPDQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
..|++++|+|++++|++|+.||.|++|++++++
T Consensus 310 ~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 310 PQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred CceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 899999999999999999999999999987653
No 26
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.1e-42 Score=308.35 Aligned_cols=303 Identities=17% Similarity=0.292 Sum_probs=235.0
Q ss_pred cceeecccCceEEEEEEccC-CcEEEEec-CCeEEEEeccccCcC--CCcccccccccceeEEEEecCCCeEEeeeCCcc
Q psy14511 28 YPTAITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQLDAK--RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGIC 103 (488)
Q Consensus 28 ~~~~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~~~~--~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~ 103 (488)
+..+|.||.+.|++|+|+|+ +++||||+ |++|+|||+.+.+.. .+...+.+|...|.+++|+|+++++++++.
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~--- 106 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW--- 106 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET---
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc---
Confidence 44578999999999999997 68999998 999999999865432 234457889999999999999998888776
Q ss_pred cceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511 104 DQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK 183 (488)
Q Consensus 104 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (488)
|+.|++|+.....................
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 135 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVA--------------------------------------------------- 135 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEE---------------------------------------------------
T ss_pred cccceEEeecccceeeeecCCCCceeEEE---------------------------------------------------
Confidence 99999999988776555444322111110
Q ss_pred CCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC--CeEEEEeC
Q psy14511 184 AKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT--TDLAVTNT 261 (488)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~ 261 (488)
.......+++++.|+.+++||....... .....+ |...+.+++|++++ ..++++ +
T Consensus 136 --------------------~~~~~~~l~s~s~d~~~~~~d~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~~~~~s~-~ 192 (340)
T 4aow_A 136 --------------------FSSDNRQIVSGSRDKTIKLWNTLGVCKY-TVQDES-HSEWVSCVRFSPNSSNPIIVSC-G 192 (340)
T ss_dssp --------------------ECTTSSCEEEEETTSCEEEECTTSCEEE-EECSSS-CSSCEEEEEECSCSSSCEEEEE-E
T ss_pred --------------------EeecCccceeecCCCeEEEEEeCCCceE-EEEecc-ccCcccceEEccCCCCcEEEEE-c
Confidence 1112356888899999999998776543 333444 88899999999875 345566 8
Q ss_pred CCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcE
Q psy14511 262 CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY 339 (488)
Q Consensus 262 ~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 339 (488)
.|+.|++||+++++.+..+.+|...|.+++| ++++|++++.||.|++||+++.. ....+.. ...+.+++|+|++.+
T Consensus 193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~-~~~~~~~-~~~v~~~~~~~~~~~ 270 (340)
T 4aow_A 193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK-HLYTLDG-GDIINALCFSPNRYW 270 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-EEEEEEC-SSCEEEEEECSSSSE
T ss_pred CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc-eeeeecC-CceEEeeecCCCCce
Confidence 9999999999999999999999999999999 68999999999999999999853 4444444 457999999999988
Q ss_pred EEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCE
Q psy14511 340 LASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTC 419 (488)
Q Consensus 340 l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 419 (488)
++++.|+.|++||+++.. .+..+..........+|...|++++|+||+++
T Consensus 271 ~~~~~d~~i~iwd~~~~~------------------------------~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 320 (340)
T 4aow_A 271 LCAATGPSIKIWDLEGKI------------------------------IVDELKQEVISTSSKAEPPQCTSLAWSADGQT 320 (340)
T ss_dssp EEEEETTEEEEEETTTTE------------------------------EEEEECCC-------CCCCCEEEEEECTTSSE
T ss_pred eeccCCCEEEEEECCCCe------------------------------EEEeccccceeeeccCCCCCEEEEEECCCCCE
Confidence 888778999999987541 12222222333455678999999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCc
Q psy14511 420 VAAASADETISIWNCFPRDK 439 (488)
Q Consensus 420 l~t~~~dg~v~iw~~~~~~~ 439 (488)
|++|+.||.|++||+.+|.+
T Consensus 321 l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 321 LFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EEEEETTSCEEEEEEEC---
T ss_pred EEEEeCCCEEEEEeCCCcCC
Confidence 99999999999999998763
No 27
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-43 Score=330.34 Aligned_cols=322 Identities=16% Similarity=0.224 Sum_probs=255.0
Q ss_pred cCCc-eEEEe----------ecCCeEEEEEcccCccc-ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc
Q psy14511 3 WNGN-LLSCG----------TIGGNILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA 69 (488)
Q Consensus 3 ~dg~-~la~g----------~~dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~ 69 (488)
.||+ +||+| +.||.|+|||+.++... ......|...|.+++|+|++++|++++ |+.|++||+.+...
T Consensus 22 p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~ 101 (416)
T 2pm9_A 22 HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANN 101 (416)
T ss_dssp SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTS
T ss_pred CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccc
Confidence 3776 99999 88999999999987532 122346889999999999999999998 99999999986322
Q ss_pred -CCCcccccccccceeEEEEecC-CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEE
Q psy14511 70 -KRPQVNNQCHLSAVKAIAWCPW-EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFL 147 (488)
Q Consensus 70 -~~~~~~~~~h~~~v~~l~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (488)
...+..+.+|...|.+++|+|+ ++++++++. |+.|++||+.+++.......
T Consensus 102 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~------------------------ 154 (416)
T 2pm9_A 102 AINSMARFSNHSSSVKTVKFNAKQDNVLASGGN---NGEIFIWDMNKCTESPSNYT------------------------ 154 (416)
T ss_dssp CCCEEEECCCSSSCCCEEEECSSSTTBEEEECS---SSCEEBCBTTTTSSCTTTCC------------------------
T ss_pred cccchhhccCCccceEEEEEcCCCCCEEEEEcC---CCeEEEEECCCCcccccccc------------------------
Confidence 2255567889999999999998 665555554 99999999987651100000
Q ss_pred EeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCC
Q psy14511 148 LHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKT 227 (488)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~ 227 (488)
T Consensus 155 -------------------------------------------------------------------------------- 154 (416)
T 2pm9_A 155 -------------------------------------------------------------------------------- 154 (416)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEecCCCCCCceEEEEEcCC-CCeEEEEeCCCCcEEEEECCcceeeeeeccc------cccEEEEEe--cC-CEE
Q psy14511 228 NKTQLLVEYPTYDNAYISCVAWKPR-TTDLAVTNTCTEYIDLWHEQEERLIQKLRTH------MHQVIAMCW--NG-NLL 297 (488)
Q Consensus 228 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~v~~~~~--~~-~~l 297 (488)
......... |...|.+++|+|+ +..++++ +.|+.|++||+++++.+..+..+ ...+.+++| ++ .++
T Consensus 155 --~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 230 (416)
T 2pm9_A 155 --PLTPGQSMS-SVDEVISLAWNQSLAHVFASA-GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRV 230 (416)
T ss_dssp --CBCCCCSCC-SSCCCCEEEECSSCTTEEEEE-SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEE
T ss_pred --ccccccccC-CCCCeeEEEeCCCCCcEEEEE-cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEE
Confidence 000000111 7788999999999 6777777 99999999999999998888776 789999999 33 689
Q ss_pred EEeecCC---eEEEEECcCCCccceeee-cCCccEEEEEEcc-CCcEEEEEe-cCeEEEEECCCCCCCccccee-----e
Q psy14511 298 SCGTIGG---NILHYDVRTHSDYPTAIT-REGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----V 366 (488)
Q Consensus 298 ~~~~~dg---~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~s~-~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~ 366 (488)
++++.|+ .|++||+++.......+. .|...|.+++|+| ++++|++++ |+.|++||+++.+....+... .
T Consensus 231 ~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~ 310 (416)
T 2pm9_A 231 ATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFK 310 (416)
T ss_dssp EEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCC
T ss_pred EEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEE
Confidence 9999998 999999998766777777 8999999999999 999999999 699999999987654443322 2
Q ss_pred eeecCCC-CEEEEEccCCCCeEEEEeCCCcceeEEEee-----------------------------------ccccEEE
Q psy14511 367 PKLKREG-RELVTSHGKQDCSLKMWEYPRLHLIEELKI-----------------------------------HQERILS 410 (488)
Q Consensus 367 ~~~~~~~-~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-----------------------------------~~~~v~~ 410 (488)
.+|+|++ +++++ ++.|+.|++||+.+++....... |..++.+
T Consensus 311 ~~~s~~~~~~l~s--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (416)
T 2pm9_A 311 TKFAPEAPDLFAC--ASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPA 388 (416)
T ss_dssp EEECTTCTTEEEE--CCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCC
T ss_pred EEECCCCCCEEEE--EecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccc
Confidence 2999999 78888 78999999999987654322211 5677889
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511 411 AVLSPDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 411 ~~~s~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
++|+|||++|++++.||.|+||++.+.
T Consensus 389 ~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 389 AHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred eEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 999999999999999999999999864
No 28
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.7e-42 Score=304.02 Aligned_cols=267 Identities=17% Similarity=0.234 Sum_probs=230.5
Q ss_pred CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeee
Q psy14511 72 PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGF 151 (488)
Q Consensus 72 ~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (488)
...++.+|.+.|.+++|+|+++++++++. |++|++||+.++..+..+.
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~---dg~v~lWd~~~~~~~~~~~----------------------------- 52 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLY---SGRVELWNYETQVEVRSIQ----------------------------- 52 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEE-----------------------------
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcC---CCcEEEEECCCCceeEEee-----------------------------
Confidence 34457889999999999999998888776 9999999998776432221
Q ss_pred eccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceE
Q psy14511 152 EIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQ 231 (488)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~ 231 (488)
T Consensus 53 -------------------------------------------------------------------------------- 52 (304)
T 2ynn_A 53 -------------------------------------------------------------------------------- 52 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEE
Q psy14511 232 LLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHY 309 (488)
Q Consensus 232 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~ 309 (488)
. |..++.+++|+|++++|+++ +.|+.|++||+.+++.+..+.+|...|.+++| +++++++|+.|+.|++|
T Consensus 53 ------~-~~~~v~~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lW 124 (304)
T 2ynn_A 53 ------V-TETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLW 124 (304)
T ss_dssp ------C-CSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred ------c-cCCcEEEEEEeCCCCEEEEE-CCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEE
Confidence 1 66789999999999999999 99999999999999999999999999999999 68899999999999999
Q ss_pred ECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEe-cCeEEEEECCCCCCCcccce------eeeeecC--CCCEEEEE
Q psy14511 310 DVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPLGL------IVPKLKR--EGRELVTS 379 (488)
Q Consensus 310 d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------~~~~~~~--~~~~l~~~ 379 (488)
|++++......+.+|...|.+++|+| ++.+|++++ |+.|++||+.+......+.. ....|+| +++++++
T Consensus 125 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s- 203 (304)
T 2ynn_A 125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT- 203 (304)
T ss_dssp EGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEE-
T ss_pred ECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEE-
Confidence 99987666778889999999999999 678999999 69999999987654332211 1125554 7788988
Q ss_pred ccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc-cccccCCcceEEeecCC
Q psy14511 380 HGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR-KARQVGSGSSLEFAILK 458 (488)
Q Consensus 380 ~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~-~~~~~~~v~~~~~s~~~ 458 (488)
++.|++|++||+++++++.++.+|...|.+++|+|++++|++++.||.|++||+.+++... ...+...+.+++|+|++
T Consensus 204 -~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (304)
T 2ynn_A 204 -ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG 282 (304)
T ss_dssp -EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTC
T ss_pred -EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCC
Confidence 7899999999999999999999999999999999999999999999999999999988774 45567889999999988
Q ss_pred Cc
Q psy14511 459 QP 460 (488)
Q Consensus 459 ~~ 460 (488)
..
T Consensus 283 ~~ 284 (304)
T 2ynn_A 283 RK 284 (304)
T ss_dssp GG
T ss_pred Cc
Confidence 64
No 29
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.3e-42 Score=306.03 Aligned_cols=267 Identities=16% Similarity=0.226 Sum_probs=227.3
Q ss_pred CCceEEEeecCCeEEEEEcccCcc-cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS 81 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~ 81 (488)
++++||+|+.|++|+|||+..++. ....+.+|...|.+++|+|++.++++++ |++|++||+.+++ .+..+..|..
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~---~~~~~~~~~~ 123 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK---QIKSIDAGPV 123 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEEEECCTT
T ss_pred CCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC---EEEEEeCCCc
Confidence 577999999999999999987653 2345789999999999999999999998 9999999998754 3444567888
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
.+.+++|+|+++++++++. |+.+++|++.+++....+..+...+.
T Consensus 124 ~~~~~~~spdg~~l~~g~~---dg~v~i~~~~~~~~~~~~~~~~~~v~-------------------------------- 168 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTH---VGKVNIFGVESGKKEYSLDTRGKFIL-------------------------------- 168 (321)
T ss_dssp CCCCEEECTTSSEEEEECT---TSEEEEEETTTCSEEEEEECSSSCEE--------------------------------
T ss_pred cEEEEEECCCCCEEEEEcC---CCcEEEEEcCCCceeEEecCCCceEE--------------------------------
Confidence 9999999999998777766 99999999998887666554432222
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY 239 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~ 239 (488)
.+.|+ +..+++++.|+.|++||+.+++....+. +
T Consensus 169 -----------------------------------------~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~--~- 204 (321)
T 3ow8_A 169 -----------------------------------------SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE--G- 204 (321)
T ss_dssp -----------------------------------------EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--C-
T ss_pred -----------------------------------------EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc--c-
Confidence 23332 2457778899999999999998766554 3
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY 317 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 317 (488)
|..+|.+++|+|++++|+++ +.|+.|++||+++++....+.+|...|.+++| ++++|++++.|+.|++||++++ .+
T Consensus 205 h~~~v~~l~~spd~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~ 282 (321)
T 3ow8_A 205 HAMPIRSLTFSPDSQLLVTA-SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TC 282 (321)
T ss_dssp CSSCCCEEEECTTSCEEEEE-CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EE
T ss_pred cCCceeEEEEcCCCCEEEEE-cCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-EE
Confidence 88899999999999999999 99999999999999999999999999999999 6899999999999999999885 57
Q ss_pred ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511 318 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354 (488)
Q Consensus 318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~ 354 (488)
...+..|...|.+++|+|++++|++++ |+.|++||+.
T Consensus 283 ~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 283 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 778889999999999999999999999 5999999964
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-41 Score=311.36 Aligned_cols=304 Identities=18% Similarity=0.305 Sum_probs=235.3
Q ss_pred CeEEEEEcccCcccce---eecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccc------------
Q psy14511 15 GNILHYDVRTHSDYPT---AITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCH------------ 79 (488)
Q Consensus 15 g~i~iwd~~~~~~~~~---~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h------------ 79 (488)
....+|+......... ...+|...|.+++|+|||++||+|+++.+++|++.+++... .+..|
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~---~l~~~~~~~~~~~~~~~ 116 (393)
T 1erj_A 40 DYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVA---RLSDDSAANKDPENLNT 116 (393)
T ss_dssp SCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEE---EECC-------------
T ss_pred ceEEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEE---EecCccccccccccccc
Confidence 3455777655442211 12369999999999999999999999999999998754322 22222
Q ss_pred ------ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511 80 ------LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153 (488)
Q Consensus 80 ------~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (488)
...|.+++|+|+++++++++. |++|++||+.+++....+..+...+..+.+.+
T Consensus 117 ~~~~~~~~~v~~v~~s~dg~~l~s~~~---d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p------------------ 175 (393)
T 1erj_A 117 SSSPSSDLYIRSVCFSPDGKFLATGAE---DRLIRIWDIENRKIVMILQGHEQDIYSLDYFP------------------ 175 (393)
T ss_dssp ----CCCCBEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECT------------------
T ss_pred cccCCCceeEEEEEECCCCCEEEEEcC---CCeEEEEECCCCcEEEEEccCCCCEEEEEEcC------------------
Confidence 234999999999998877776 99999999999988777766644333322222
Q ss_pred cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~ 233 (488)
++..+++++.|+.|++||+.+++....
T Consensus 176 -----------------------------------------------------~~~~l~s~s~d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 176 -----------------------------------------------------SGDKLVSGSGDRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp -----------------------------------------------------TSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred -----------------------------------------------------CCCEEEEecCCCcEEEEECCCCeeEEE
Confidence 235688888999999999999987766
Q ss_pred EecCCCCCCceEEEEEcC-CCCeEEEEeCCCCcEEEEECCcceeeeee-------ccccccEEEEEe--cCCEEEEeecC
Q psy14511 234 VEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEYIDLWHEQEERLIQKL-------RTHMHQVIAMCW--NGNLLSCGTIG 303 (488)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~--~~~~l~~~~~d 303 (488)
+. +...+.+++|+| ++++++++ +.|+.|++||+++++.+..+ .+|...|.+++| ++++|++++.|
T Consensus 203 ~~----~~~~v~~~~~~~~~~~~l~~~-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 203 LS----IEDGVTTVAVSPGDGKYIAAG-SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp EE----CSSCEEEEEECSTTCCEEEEE-ETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EE----cCCCcEEEEEECCCCCEEEEE-cCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 65 556799999999 88889888 99999999999998877766 578999999999 78999999999
Q ss_pred CeEEEEECcCCC-----------ccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCC
Q psy14511 304 GNILHYDVRTHS-----------DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKRE 372 (488)
Q Consensus 304 g~i~i~d~~~~~-----------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 372 (488)
+.|++||+++.. .+...+.+|...|.+++|+|++++|++++
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs---------------------------- 329 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS---------------------------- 329 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE----------------------------
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe----------------------------
Confidence 999999997632 12345667888888888888888888775
Q ss_pred CCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC------CCCEEEEEeCCCcEEEEecCCCC
Q psy14511 373 GRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP------DQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 373 ~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
.|+.|++||+.+++++..+.+|.+.|.+++|+| ++++||+|+.||.|++|++...+
T Consensus 330 ----------~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 330 ----------KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp ----------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred ----------CCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 344455555555667788899999999999986 68899999999999999987543
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.5e-41 Score=306.64 Aligned_cols=309 Identities=18% Similarity=0.291 Sum_probs=255.2
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccc--cc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQ--CH 79 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~--~h 79 (488)
+.||++++++..++.+.+|+....... ....+|...|++++|+|++++|++++|+.|++||+.+++....+..+. +|
T Consensus 18 s~dg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~ 96 (337)
T 1gxr_A 18 TADGQMQPVPFPPDALIGPGIPRHARQ-INTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNR 96 (337)
T ss_dssp CSSSCEEECCCCTTSSSSTTCCSEEEE-EEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCT
T ss_pred CCCCCEEEeecCCCcEeccccCCcccc-ceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCC
Confidence 459999998888887777766554433 334589999999999999999999999999999998766555544433 78
Q ss_pred ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
...|.+++|+|+++++++++. |+.|++||+.+++...
T Consensus 97 ~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~---------------------------------------- 133 (337)
T 1gxr_A 97 DNYIRSCKLLPDGCTLIVGGE---ASTLSIWDLAAPTPRI---------------------------------------- 133 (337)
T ss_dssp TSBEEEEEECTTSSEEEEEES---SSEEEEEECCCC--EE----------------------------------------
T ss_pred CCcEEEEEEcCCCCEEEEEcC---CCcEEEEECCCCCcce----------------------------------------
Confidence 999999999999988887776 9999999987654210
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY 239 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~ 239 (488)
......
T Consensus 134 -------------------------------------------------------------------------~~~~~~- 139 (337)
T 1gxr_A 134 -------------------------------------------------------------------------KAELTS- 139 (337)
T ss_dssp -------------------------------------------------------------------------EEEEEC-
T ss_pred -------------------------------------------------------------------------eeeccc-
Confidence 111112
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY 317 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 317 (488)
+...+.+++|+|++++++++ +.++.|++||+++++.+..+..|...+.+++| +++.+++++.||.|++||+++.+ .
T Consensus 140 ~~~~i~~~~~~~~~~~l~~~-~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~ 217 (337)
T 1gxr_A 140 SAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR-Q 217 (337)
T ss_dssp SSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-E
T ss_pred CCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc-e
Confidence 67789999999999999999 89999999999999999999999999999999 68899999999999999998864 3
Q ss_pred ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce----eeeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511 318 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL----IVPKLKREGRELVTSHGKQDCSLKMWEY 392 (488)
Q Consensus 318 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~i~i~d~ 392 (488)
... ..+...+.+++|+|++++|++++ ++.+++||+.+.+....... ....|+|+++++++ ++.|+.|++||+
T Consensus 218 ~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~~~~~ 294 (337)
T 1gxr_A 218 LQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS--TGKDNLLNAWRT 294 (337)
T ss_dssp EEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEE--EETTSEEEEEET
T ss_pred Eee-ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEE--ecCCCcEEEEEC
Confidence 333 34677899999999999999999 59999999987753221111 12289999999998 788999999999
Q ss_pred CCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511 393 PRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC 434 (488)
Q Consensus 393 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~ 434 (488)
.+++.+.. ..|...|.+++|+|++++|++++.||.|++|++
T Consensus 295 ~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 295 PYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 99988755 458889999999999999999999999999996
No 32
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.1e-42 Score=345.84 Aligned_cols=371 Identities=13% Similarity=0.137 Sum_probs=290.1
Q ss_pred cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS 81 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~ 81 (488)
.||++||+|+.||.|+|||+.+++.+ ..+.+|.+.|++++|+|++++|++++ |+.|++||+.++. .....+.+|..
T Consensus 65 ~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~ 141 (814)
T 3mkq_A 65 ARKNWIIVGSDDFRIRVFNYNTGEKV-VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEH 141 (814)
T ss_dssp GGGTEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS--EEEEEEECCSS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEE-EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc--eEEEEEcCCCC
Confidence 38999999999999999999998854 56789999999999999999999998 9999999998642 23345678999
Q ss_pred ceeEEEEec-CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCC-CccccccccccccccceeEEEEEeeeecccccee
Q psy14511 82 AVKAIAWCP-WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDS-QQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 82 ~v~~l~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
.|.+++|+| ++..+++++. |+.|++||+.++.....+..+. ..+....+.+.+
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~---dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------------- 196 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCL---DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLP---------------------- 196 (814)
T ss_dssp CEEEEEEETTEEEEEEEEET---TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCST----------------------
T ss_pred cEEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECC----------------------
Confidence 999999999 7766666665 9999999998877655544332 111111111100
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY 239 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~ 239 (488)
.+..+++++.|+.|++||+.+++....+..
T Consensus 197 -----------------------------------------------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~--- 226 (814)
T 3mkq_A 197 -----------------------------------------------DKPYMITASDDLTIKIWDYQTKSCVATLEG--- 226 (814)
T ss_dssp -----------------------------------------------TCCEEEEECTTSEEEEEETTTTEEEEEEEC---
T ss_pred -----------------------------------------------CCCEEEEEeCCCEEEEEECCCCcEEEEEcC---
Confidence 234577778999999999999887666554
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcCCCc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRTHSD 316 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~~~~ 316 (488)
|...|.+++|+|+++.++++ +.||.|++||+.+++.+..+..|...+.+++| ++. .+++.+.++.+.+|++.....
T Consensus 227 ~~~~v~~~~~~~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 227 HMSNVSFAVFHPTLPIIISG-SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEP 305 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEE-ETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSC
T ss_pred CCCCEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCc
Confidence 78899999999999999999 89999999999999999999999999999999 444 235555577788888764321
Q ss_pred cc------------------------------------------eeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511 317 YP------------------------------------------TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR 354 (488)
Q Consensus 317 ~~------------------------------------------~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~ 354 (488)
.. .....+...+.+++|+|+|+++++++++.+.+|++.
T Consensus 306 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~ 385 (814)
T 3mkq_A 306 TLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTAL 385 (814)
T ss_dssp CEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETT
T ss_pred eeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECc
Confidence 10 111234445789999999999999999999999986
Q ss_pred CCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCC---CEEEEEeCCCcEEE
Q psy14511 355 QLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQ---TCVAAASADETISI 431 (488)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~t~~~dg~v~i 431 (488)
.......-.....+|+|+++++++ +..++.+++|+. +.+|...+.+++|+|++ ++|++++.|+.|++
T Consensus 386 ~~~~~~~~~i~~~~~spdg~~la~--~~~~g~v~l~~~--------~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~ 455 (814)
T 3mkq_A 386 AWRNKAFGKCQDFVWGPDSNSYAL--IDETGQIKYYKN--------FKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYF 455 (814)
T ss_dssp TTEEEEEEECSEEEECTTSSCEEE--ECTTCCEEEEET--------TEECTTCCCCCSSCCCEEECSSSEEEEETTEEEE
T ss_pred cccccCCCceEEEEEeCCCCeEEE--EeCCCcEEEEEC--------CCCccceEEcCCcCccceecceEEEEecCCEEEE
Confidence 543222112223399999999999 788999999963 35688889999999998 68999999999999
Q ss_pred EecCCCCccccccccCCcceEEeecCCCceEEE
Q psy14511 432 WNCFPRDKKRKARQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 432 w~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~ 464 (488)
||+.+++.......... .+.|+|+++.++..
T Consensus 456 ~d~~~~~~~~~~~~~~~--~v~~s~dg~~la~~ 486 (814)
T 3mkq_A 456 FDWDNGTLVRRIDVNAK--DVIWSDNGELVMIV 486 (814)
T ss_dssp ECTTTCCEEEEESSCEE--EEEECTTSSEEEEE
T ss_pred EECCcCcEEEEEecCCC--EEEEcCCCCEEEEE
Confidence 99999887754333222 89999999998776
No 33
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.5e-42 Score=309.28 Aligned_cols=279 Identities=16% Similarity=0.241 Sum_probs=218.5
Q ss_pred CccCCceEEEeec------CCeEEEEEcccCcccc---eeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCC
Q psy14511 1 MCWNGNLLSCGTI------GGNILHYDVRTHSDYP---TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKR 71 (488)
Q Consensus 1 ~~~dg~~la~g~~------dg~i~iwd~~~~~~~~---~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~ 71 (488)
++.||++||+|+. |+.|++|+..++.... ....+|...|.+++|+|++++|+++.|++|+|||+.+++...
T Consensus 50 fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~ 129 (357)
T 4g56_B 50 YRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLL 129 (357)
T ss_dssp ECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------C
T ss_pred ECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeE
Confidence 3569999999997 7889999987765332 234578899999999999988877679999999998765433
Q ss_pred Cc-ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511 72 PQ-VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG 150 (488)
Q Consensus 72 ~~-~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (488)
.. ....+|...|.+++|+|++++|++++. |++|++||+.+++.+..+..+...+..+.++++.
T Consensus 130 ~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~------------- 193 (357)
T 4g56_B 130 VNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK------------- 193 (357)
T ss_dssp CCCEEECCCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC-------------
T ss_pred EEeeccCCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC-------------
Confidence 22 234579999999999999998887776 9999999999999888777664433333222211
Q ss_pred eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511 151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT 230 (488)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~ 230 (488)
...+++++.|+.|++||+++++.
T Consensus 194 ---------------------------------------------------------~~~~~s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 194 ---------------------------------------------------------DTIFLSCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp ---------------------------------------------------------SSCEEEEETTSCEEECCTTSSSC
T ss_pred ---------------------------------------------------------CceeeeeccCCceEEEECCCCce
Confidence 23577888999999999999887
Q ss_pred EEEEecCCCCCCceEEEEEcCCCC-eEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeE
Q psy14511 231 QLLVEYPTYDNAYISCVAWKPRTT-DLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNI 306 (488)
Q Consensus 231 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i 306 (488)
........ +...+.+++|+|++. +++++ +.|+.|++||+++++.+..+.+|...|.+++| ++ ++|++++.|+.|
T Consensus 217 ~~~~~~~~-~~~~v~~v~~sp~~~~~la~g-~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 217 ATRIDFCA-SDTIPTSVTWHPEKDDTFACG-DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp BCBCCCTT-CCSCEEEEEECTTSTTEEEEE-ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred eeeeeecc-ccccccchhhhhcccceEEEe-ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 76666555 778899999999865 55566 99999999999999999999999999999999 44 689999999999
Q ss_pred EEEECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEe-cCeEEEEECCCC
Q psy14511 307 LHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQL 356 (488)
Q Consensus 307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~-d~~i~iwd~~~~ 356 (488)
++||+++++ . ....+|.+.|++++|+| ++++|++++ |+.|++||+.+.
T Consensus 295 ~iwd~~~~~-~-~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 295 AVLDADFSE-V-FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEECTTSCE-E-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEECCCCc-E-eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 999998753 3 34458999999999999 799999998 799999999754
No 34
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=305.68 Aligned_cols=277 Identities=13% Similarity=0.169 Sum_probs=213.3
Q ss_pred ccCCceEEEeecCCeEEEEEcccC-------c---ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcC
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTH-------S---DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK 70 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~-------~---~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~ 70 (488)
+.||++|++++ |+++++||.... . ........|...|.+++|+|+++ |++|+ ||+|+|||+++++..
T Consensus 39 s~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~ 116 (344)
T 4gqb_B 39 RSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERG-ILVASDSGAVELWELDENETL 116 (344)
T ss_dssp CTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTE-EEEEETTSEEEEEEECTTSSC
T ss_pred CCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCce
Confidence 45999999887 778888874311 0 11122335667899999999975 55565 999999999886544
Q ss_pred CCc-ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEe
Q psy14511 71 RPQ-VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLH 149 (488)
Q Consensus 71 ~~~-~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (488)
... ..+.+|.+.|++++|+|++++|++++. |++|++||+.+++.+..+.++...+..+.++++.
T Consensus 117 ~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~---d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~------------ 181 (344)
T 4gqb_B 117 IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK---DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK------------ 181 (344)
T ss_dssp EEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSC------------
T ss_pred eEeeccccCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCC------------
Confidence 322 234589999999999999998877776 9999999999999988887775544333322211
Q ss_pred eeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCc
Q psy14511 150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229 (488)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~ 229 (488)
...+++++.|+.|++||+++++
T Consensus 182 ----------------------------------------------------------~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 182 ----------------------------------------------------------DSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp ----------------------------------------------------------TTEEEEEETTSCEEEEETTSSS
T ss_pred ----------------------------------------------------------CCceeeeccccccccccccccc
Confidence 1236678899999999999998
Q ss_pred eEEEEecCCCCCCceEEEEEcCCCC-eEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCe
Q psy14511 230 TQLLVEYPTYDNAYISCVAWKPRTT-DLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGN 305 (488)
Q Consensus 230 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~ 305 (488)
....+.... +...+.+++|+|++. +++++ +.|+.|++||+++++++..+.+|...|.+++| ++ ++|++|+.|+.
T Consensus 204 ~~~~~~~~~-~~~~~~~~~~~p~~~~~l~sg-~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~ 281 (344)
T 4gqb_B 204 PASQIGCSA-PGYLPTSLAWHPQQSEVFVFG-DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS 281 (344)
T ss_dssp CEEECC-----CCCEEEEEECSSCTTEEEEE-ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred eeeeeecce-eeccceeeeecCCCCcceEEe-ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe
Confidence 877766554 667899999999654 55666 99999999999999999999999999999999 45 67999999999
Q ss_pred EEEEECcCCCccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCC
Q psy14511 306 ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLD 357 (488)
Q Consensus 306 i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~ 357 (488)
|++||+++++ ...+.+|.+.|++++|+|+++ +|++++ |++|++|++.+..
T Consensus 282 i~vwd~~~~~--~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 282 LAVLDSSLSE--LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEECTTCCE--EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEECCCCc--EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 9999998753 456789999999999999986 577887 7999999998653
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.6e-41 Score=312.88 Aligned_cols=308 Identities=16% Similarity=0.192 Sum_probs=250.5
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+.||++|++|+.||.|++||+.+++.. ..+..| ..+....|+|++++||+++ |+.|++||+.+++ ....+.+|.
T Consensus 65 s~~g~~l~~~~~d~~v~i~d~~~~~~~-~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~h~ 139 (420)
T 3vl1_A 65 EKVGSHLYKARLDGHDFLFNTIIRDGS-KMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL---QREIDQAHV 139 (420)
T ss_dssp EEEETTEEEEEETTEEEEEECCSEETT-TTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE---EEEETTSSS
T ss_pred eecCCeEEEEEcCCcEEEEEeccccee-eEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc---eeeeccccc
Confidence 348999999999999999999887744 445556 5566668999999999998 9999999998643 344467899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
+.|.+++|+|++++|++++. |+.|++||+.+++.+..+
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~--------------------------------------- 177 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQ---DMQLKIWSVKDGSNPRTL--------------------------------------- 177 (420)
T ss_dssp SCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCCCEEE---------------------------------------
T ss_pred CccEEEEECCCCCEEEEEeC---CCeEEEEeCCCCcCceEE---------------------------------------
Confidence 99999999999988777776 999999999876532211
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~ 240 (488)
.+ |
T Consensus 178 ----------------------------------------------------------------------------~~-h 180 (420)
T 3vl1_A 178 ----------------------------------------------------------------------------IG-H 180 (420)
T ss_dssp ----------------------------------------------------------------------------EC-C
T ss_pred ----------------------------------------------------------------------------cC-C
Confidence 11 7
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc---ccccEEEEEe-----------------------cC
Q psy14511 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT---HMHQVIAMCW-----------------------NG 294 (488)
Q Consensus 241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~-----------------------~~ 294 (488)
...|.+++|+|+++.|+++ +.|+.|++||+++++.+..+.. +...+.++.+ ++
T Consensus 181 ~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSA-SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp SSCEEEEEEETTTTEEEEE-ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CCcEEEEEEcCCCCEEEEE-cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 7889999999999999998 9999999999999998888864 4555666554 57
Q ss_pred CEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCCC-Ccccce-----ee
Q psy14511 295 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDA-KRPLGL-----IV 366 (488)
Q Consensus 295 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~~-~~~~~~-----~~ 366 (488)
+++++++.||.|++||++++.........|...|.+++|+|+++ +|++++ |+.|++||+++.+. ...+.. ..
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 339 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPIN 339 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEE
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCce
Confidence 79999999999999999987655555667889999999999998 999998 59999999998753 222221 12
Q ss_pred eeecCCCCEEEEEccCCCCeEEEEeCCCc---------ceeEEEeeccccEEEEEEcCCCC---EEEEEeCCCcEEEEec
Q psy14511 367 PKLKREGRELVTSHGKQDCSLKMWEYPRL---------HLIEELKIHQERILSAVLSPDQT---CVAAASADETISIWNC 434 (488)
Q Consensus 367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~s~~~~---~l~t~~~dg~v~iw~~ 434 (488)
..+.++++++++ ++.|+.|++|++.+. .....+.+|...|.+++|+|+++ .|++++.+|.+.+|++
T Consensus 340 ~~~~~~~~~l~s--~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 340 NVYFAAGALFVS--SGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp EEEEETTEEEEE--ETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred EEEeCCCCEEEE--ecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence 256678888888 789999999998763 22345667888999999999999 7888888999999998
Q ss_pred CC
Q psy14511 435 FP 436 (488)
Q Consensus 435 ~~ 436 (488)
++
T Consensus 418 ~~ 419 (420)
T 3vl1_A 418 SN 419 (420)
T ss_dssp CC
T ss_pred cC
Confidence 75
No 36
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-40 Score=300.06 Aligned_cols=269 Identities=17% Similarity=0.298 Sum_probs=225.6
Q ss_pred cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcC-CCcccccccc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK-RPQVNNQCHL 80 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~-~~~~~~~~h~ 80 (488)
.||++||+|+.||+|+|||+.+++.+ ..+..|...|.+++|+|++++|++|+ |+.|++|++.+.+.. .....+.+|.
T Consensus 65 ~d~~~l~s~s~Dg~v~iWd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~ 143 (340)
T 1got_B 65 TDSRLLLSASQDGKLIIWDSYTTNKV-HAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHT 143 (340)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEE-EEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCS
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCcc-eEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCC
Confidence 48999999999999999999988754 56788999999999999999999998 999999999864322 2334567899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
+.|.++.|++++. +++++. |++|++||+.+++....+..+...+..+.+.+
T Consensus 144 ~~v~~~~~~~~~~-l~s~s~---d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~------------------------- 194 (340)
T 1got_B 144 GYLSCCRFLDDNQ-IVTSSG---DTTCALWDIETGQQTTTFTGHTGDVMSLSLAP------------------------- 194 (340)
T ss_dssp SCEEEEEEEETTE-EEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECT-------------------------
T ss_pred ccEEEEEECCCCc-EEEEEC---CCcEEEEECCCCcEEEEEcCCCCceEEEEECC-------------------------
Confidence 9999999999874 666665 99999999999988877766544332222221
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~ 240 (488)
.+..+++++.|+.|++||+.++.....+.. |
T Consensus 195 ----------------------------------------------~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~---h 225 (340)
T 1got_B 195 ----------------------------------------------DTRLFVSGACDASAKLWDVREGMCRQTFTG---H 225 (340)
T ss_dssp ----------------------------------------------TSSEEEEEETTSCEEEEETTTCSEEEEECC---C
T ss_pred ----------------------------------------------CCCEEEEEeCCCcEEEEECCCCeeEEEEcC---C
Confidence 124577788999999999999887666543 8
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc
Q psy14511 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD 316 (488)
Q Consensus 241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~ 316 (488)
...|.+++|+|++++++++ +.|+.|++||++.++.+..+.. +...+.+++| +++++++|+.|+.|++||+.+. .
T Consensus 226 ~~~v~~v~~~p~~~~l~s~-s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~-~ 303 (340)
T 1got_B 226 ESDINAICFFPNGNAFATG-SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA-D 303 (340)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-C
T ss_pred cCCEEEEEEcCCCCEEEEE-cCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC-c
Confidence 8899999999999999999 9999999999998887766643 3457999999 7899999999999999999875 4
Q ss_pred cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511 317 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD 352 (488)
Q Consensus 317 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd 352 (488)
....+.+|..+|.+++|+|++++|++++ |+.|++||
T Consensus 304 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 6677889999999999999999999999 69999996
No 37
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-41 Score=312.27 Aligned_cols=335 Identities=15% Similarity=0.190 Sum_probs=257.4
Q ss_pred CeEEEEEcccCcccceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEec----cccCc------CCCc-cccc----
Q psy14511 15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDF----RQLDA------KRPQ-VNNQ---- 77 (488)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~----~~~~~------~~~~-~~~~---- 77 (488)
..+.+|+.+..... .....|.+.|++++|+|+|+ +||+++ |+.|++||+ .+++. ...+ ..+.
T Consensus 25 ~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (425)
T 1r5m_A 25 SIDSSDDLDGFVKI-LKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSAS 103 (425)
T ss_dssp ---------CCCEE-CEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC--
T ss_pred cccccccchhhhhh-eeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccc
Confidence 34567777654422 22345668999999999999 999998 999999999 76541 1111 1112
Q ss_pred --ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511 78 --CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155 (488)
Q Consensus 78 --~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (488)
+|.+.|.+++|+|++++|++++. |+.|++|| .+++....
T Consensus 104 ~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i~~-~~~~~~~~----------------------------------- 144 (425)
T 1r5m_A 104 SGKTTNQVTCLAWSHDGNSIVTGVE---NGELRLWN-KTGALLNV----------------------------------- 144 (425)
T ss_dssp ----CBCEEEEEECTTSSEEEEEET---TSCEEEEE-TTSCEEEE-----------------------------------
T ss_pred ccCCCCceEEEEEcCCCCEEEEEeC---CCeEEEEe-CCCCeeee-----------------------------------
Confidence 26789999999999988887776 99999999 34332211
Q ss_pred cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE 235 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~ 235 (488)
T Consensus 145 -------------------------------------------------------------------------------- 144 (425)
T 1r5m_A 145 -------------------------------------------------------------------------------- 144 (425)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc---------------EEEEEe-cCCEEEE
Q psy14511 236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ---------------VIAMCW-NGNLLSC 299 (488)
Q Consensus 236 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~---------------v~~~~~-~~~~l~~ 299 (488)
+.. |...|.+++|+|++++++++ +.|+.|++||+.+++.+..+..+... +.++.| .+..+++
T Consensus 145 ~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (425)
T 1r5m_A 145 LNF-HRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVI 222 (425)
T ss_dssp ECC-CCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEE
T ss_pred ccC-CCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEE
Confidence 112 77889999999999999999 89999999999999998888877766 788888 5678999
Q ss_pred eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCC
Q psy14511 300 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREG 373 (488)
Q Consensus 300 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~ 373 (488)
++.+|.|++||+++. .....+..|...|.+++|+|++++|++++ |+.|++||+++.+....+... ...|+|++
T Consensus 223 ~~~~g~i~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 223 PGPKGAIFVYQITEK-TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD 301 (425)
T ss_dssp ECGGGCEEEEETTCS-SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT
T ss_pred EcCCCeEEEEEcCCC-ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC
Confidence 999999999999986 56777888999999999999999999999 699999999987655444322 22899999
Q ss_pred CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC---------------
Q psy14511 374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD--------------- 438 (488)
Q Consensus 374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~--------------- 438 (488)
.+++ ++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 302 -~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 378 (425)
T 1r5m_A 302 -KVIS--CSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN 378 (425)
T ss_dssp -EEEE--EETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------
T ss_pred -EEEE--EeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccC
Confidence 7777 7889999999999999999999999999999999999999999999999999999877
Q ss_pred -----cc-ccccccC--CcceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511 439 -----KK-RKARQVG--SGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT 482 (488)
Q Consensus 439 -----~~-~~~~~~~--~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~ 482 (488)
.. ....+.. .+.+++|+|+++.+. .+..+..+.++..
T Consensus 379 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-------~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 379 PLPIPLYASYQSSQDNDYIFDLSWNCAGNKIS-------VAYSLQEGSVVAI 423 (425)
T ss_dssp CEECCEEEEECCTTCCCCEEEEEECTTSSEEE-------EEESSSCCEEEEC
T ss_pred cccchhhhhhcCcccCCceEEEEccCCCceEE-------EEecCceEEEEee
Confidence 44 3344544 999999999998663 3445556666653
No 38
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.3e-41 Score=301.83 Aligned_cols=278 Identities=21% Similarity=0.297 Sum_probs=218.4
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccc--eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYP--TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC 78 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~--~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~ 78 (488)
+.||++||+|+.|++|+|||+.++.... ....+|...|.+++|+|+|++||+|+ |+.|++||+.++. ...+..+.+
T Consensus 25 sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-~~~~~~~~~ 103 (345)
T 3fm0_A 25 NPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-FECVTTLEG 103 (345)
T ss_dssp CTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC--EEEEEEECC
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-eEEEEEccC
Confidence 3489999999999999999998775332 23468999999999999999999999 9999999987643 234556788
Q ss_pred cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeee---eeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK---CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155 (488)
Q Consensus 79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (488)
|...|.+++|+|++++|++++. |++|++||+.++... ..+..+..
T Consensus 104 h~~~v~~v~~sp~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~h~~----------------------------- 151 (345)
T 3fm0_A 104 HENEVKSVAWAPSGNLLATCSR---DKSVWVWEVDEEDEYECVSVLNSHTQ----------------------------- 151 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEET---TSCEEEEEECTTSCEEEEEEECCCCS-----------------------------
T ss_pred CCCCceEEEEeCCCCEEEEEEC---CCeEEEEECCCCCCeEEEEEecCcCC-----------------------------
Confidence 9999999999999988777776 999999999776432 22222211
Q ss_pred cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEE
Q psy14511 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~ 233 (488)
.+..+.|+ ...+++++.|+.|++|+..+++....
T Consensus 152 --------------------------------------------~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 152 --------------------------------------------DVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCC 187 (345)
T ss_dssp --------------------------------------------CEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred --------------------------------------------CeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEE
Confidence 12223333 35688888999999999998876666
Q ss_pred EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc---------------ceeeeeecc-ccccEEEEEe--cCC
Q psy14511 234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE---------------ERLIQKLRT-HMHQVIAMCW--NGN 295 (488)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~---------------~~~~~~~~~-~~~~v~~~~~--~~~ 295 (488)
..+.+ |...|.+++|+|++++|+++ +.|+.|++|+... .+++..+.+ |...|.+++| ++.
T Consensus 188 ~~~~~-h~~~v~~l~~sp~g~~l~s~-s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~ 265 (345)
T 3fm0_A 188 ATLEG-HESTVWSLAFDPSGQRLASC-SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG 265 (345)
T ss_dssp EEECC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC
T ss_pred EEecC-CCCceEEEEECCCCCEEEEE-eCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC
Confidence 66666 99999999999999999999 9999999999632 133444444 8889999999 688
Q ss_pred EEEEeecCCeEEEEECcCCCcc---c-----eeeecCCccEEEEEEccCC-cEEEEEe-cCeEEEEECCCCCC
Q psy14511 296 LLSCGTIGGNILHYDVRTHSDY---P-----TAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDA 358 (488)
Q Consensus 296 ~l~~~~~dg~i~i~d~~~~~~~---~-----~~~~~~~~~i~~~~~s~~~-~~l~~~~-d~~i~iwd~~~~~~ 358 (488)
.+++++.|+.|++|+....... . ....+|...|++++|+|++ .+||+++ ||.|++|++.+.+.
T Consensus 266 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 266 ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 9999999999999998754321 1 1235789999999999998 5999998 69999999987643
No 39
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-42 Score=321.33 Aligned_cols=307 Identities=10% Similarity=0.086 Sum_probs=221.6
Q ss_pred CCceEEEeecCCeEEEEEcccCcccc---eeecccCceEEEEEEccC------CcEEEEec-CCeEEEEeccccCcC---
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYP---TAITREGDVVCGLKWSPN------GRYLASGS-NNTVKIWDFRQLDAK--- 70 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~---~~~~~h~~~V~~l~~sp~------g~~las~~-d~~i~vwd~~~~~~~--- 70 (488)
++++||+++.|++|+|||+.+++... ..+.+|.+.|.+++|+|+ +.+||+++ |++|+|||+.++...
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~ 251 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV 251 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence 44556667789999999998776322 335678889999999997 57999998 999999999865422
Q ss_pred -----CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEE
Q psy14511 71 -----RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS 145 (488)
Q Consensus 71 -----~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (488)
.+...+.+|...|++++|++++ .|++++. ||+|++||+.++....
T Consensus 252 ~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~---DgtV~lWD~~~~~~~~-------------------------- 301 (524)
T 2j04_B 252 FKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFK---NGFVAEFDLTDPEVPS-------------------------- 301 (524)
T ss_dssp EECCCSCSEEECCTTTCEEEEEESSSS-EEEEEET---TSEEEEEETTBCSSCS--------------------------
T ss_pred ceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeC---CCEEEEEECCCCCCce--------------------------
Confidence 2234567899999999999865 5555554 9999999997542100
Q ss_pred EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEEC
Q psy14511 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNT 225 (488)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~ 225 (488)
T Consensus 302 -------------------------------------------------------------------------------- 301 (524)
T 2j04_B 302 -------------------------------------------------------------------------------- 301 (524)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceEEEEecCCCCCCceEEE--EEcCCC-CeEEEEeCCCCcEEEEECCcceeeeeeccccc--cEEEEEe--cCCEEE
Q psy14511 226 KTNKTQLLVEYPTYDNAYISCV--AWKPRT-TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH--QVIAMCW--NGNLLS 298 (488)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~ 298 (488)
.. +.+ |...|.++ +|+|++ .+|+++ +.|++|++||+++++++..+.+|.. .+.+++| +++.++
T Consensus 302 ------~~--~~~-H~~~V~sv~~~~s~~g~~~laS~-S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~ 371 (524)
T 2j04_B 302 ------FY--DQV-HDSYILSVSTAYSDFEDTVVSTV-AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYI 371 (524)
T ss_dssp ------EE--EEC-SSSCEEEEEEECCTTSCCEEEEE-ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEE
T ss_pred ------EE--eec-ccccEEEEEEEcCCCCCeEEEEe-ccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEE
Confidence 00 111 78889999 578887 778888 9999999999999887777776653 4777888 578999
Q ss_pred EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccc----------eeee
Q psy14511 299 CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLG----------LIVP 367 (488)
Q Consensus 299 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~----------~~~~ 367 (488)
+++.|+.|++||++++. ....+.+|...|++++|+|+|++|++|+ |++|++||+..... .... ....
T Consensus 372 s~~~d~tv~lwd~~~~~-~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~-~~~~~~~~~~~~~~v~~v 449 (524)
T 2j04_B 372 YSDGASSLRAVPSRAAF-AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLL-HGIKNSSATQKSLRLWKW 449 (524)
T ss_dssp EECSSSEEEEEETTCTT-CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTT-TCC------CCCCEEEEC
T ss_pred EeCCCCcEEEEECcccc-cceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhc-cccccCccceeeeEEEEe
Confidence 99999999999999864 5567888999999999999999999999 69999999865422 2111 1123
Q ss_pred eecCCCCEEEEEccCCCCeEEEEeCC-CcceeEEEeeccccEEEEEEcCCCC---EEEEEeCCCcEEEEecCCC
Q psy14511 368 KLKREGRELVTSHGKQDCSLKMWEYP-RLHLIEELKIHQERILSAVLSPDQT---CVAAASADETISIWNCFPR 437 (488)
Q Consensus 368 ~~~~~~~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~---~l~t~~~dg~v~iw~~~~~ 437 (488)
+|+|+++.+.. ..+ +.+|+.. ++..+.++.+|...|++++|+|+++ .+|+|+.||.|+||++.-.
T Consensus 450 ~~sp~g~~~~~---~~~--~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 450 DYSIKDDKYRI---DSS--YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp BCCSSSCEEEE---CCC--CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred ccCCCCCeEEc---cCC--ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 88999885543 222 3344332 4677888999999999999999964 9999999999999998643
No 40
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.4e-40 Score=298.25 Aligned_cols=273 Identities=18% Similarity=0.281 Sum_probs=226.9
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc---CCCccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA---KRPQVNNQ 77 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~---~~~~~~~~ 77 (488)
+.||++||+|+.||+|+|||..+++.. ..+..|...|.+++|+|+|++||+++ |+.+++|++..... ......+.
T Consensus 73 s~d~~~l~s~s~Dg~v~vWd~~~~~~~-~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~ 151 (354)
T 2pbi_B 73 CKDKRRIVSSSQDGKVIVWDSFTTNKE-HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA 151 (354)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEE-EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCcc-eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeee
Confidence 348999999999999999999887744 56778889999999999999999999 99999999865321 12334466
Q ss_pred ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511 78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK 157 (488)
Q Consensus 78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (488)
+|...|.+++|+|++..+++++. |++|++||+++++.+..+..+...+..+.+.+..
T Consensus 152 ~h~~~v~~~~~~~~~~~l~t~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-------------------- 208 (354)
T 2pbi_B 152 MHTNYLSACSFTNSDMQILTASG---DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE-------------------- 208 (354)
T ss_dssp ECSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCS--------------------
T ss_pred ccCCcEEEEEEeCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCC--------------------
Confidence 79999999999999988888776 9999999999999888777664433222222111
Q ss_pred eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511 158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP 237 (488)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~ 237 (488)
.++.+++++.|+.|++||+++++....+..
T Consensus 209 -------------------------------------------------~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~- 238 (354)
T 2pbi_B 209 -------------------------------------------------TGNTFVSGGCDKKAMVWDMRSGQCVQAFET- 238 (354)
T ss_dssp -------------------------------------------------SCCEEEEEETTSCEEEEETTTCCEEEEECC-
T ss_pred -------------------------------------------------CCCEEEEEeCCCeEEEEECCCCcEEEEecC-
Confidence 124678888999999999999987766543
Q ss_pred CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--cccEEEEEe--cCCEEEEeecCCeEEEEECcC
Q psy14511 238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--MHQVIAMCW--NGNLLSCGTIGGNILHYDVRT 313 (488)
Q Consensus 238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~ 313 (488)
|...|++++|+|+++.++++ +.|+.|++||++.++.+..+..+ ...+.+++| +++++++++.|+.|++||+.+
T Consensus 239 --h~~~v~~v~~~p~~~~l~s~-s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 239 --HESDVNSVRYYPSGDAFASG-SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp --CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred --CCCCeEEEEEeCCCCEEEEE-eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC
Confidence 88999999999999999999 99999999999988777666543 347888888 789999999999999999987
Q ss_pred CCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEE
Q psy14511 314 HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD 352 (488)
Q Consensus 314 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd 352 (488)
+. ....+.+|...|.+++|+|+|++|++++ |+.|++|+
T Consensus 316 ~~-~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 316 GS-RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CS-EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred Cc-eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 64 5677889999999999999999999999 69999995
No 41
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.8e-40 Score=305.87 Aligned_cols=316 Identities=19% Similarity=0.304 Sum_probs=262.9
Q ss_pred ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511 29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV 107 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i 107 (488)
...+.+|.+.|.. +++++|++|++|+ |+.|++||+.+++ .+..+.+|.+.|.+++|+ ++.+++++. |++|
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~~~---dg~i 181 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK---CLRTLVGHTGGVWSSQMR--DNIIISGST---DRTL 181 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC---EEEECCCCSSCEEEEEEE--TTEEEEEET---TSCE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCc---EEEEEcCCCCCEEEEEec--CCEEEEEeC---CCeE
Confidence 3567899887533 3556799999998 9999999998754 455677899999999998 446666665 9999
Q ss_pred EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511 108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE 187 (488)
Q Consensus 108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
++||+.+++....+..+...
T Consensus 182 ~vwd~~~~~~~~~~~~h~~~------------------------------------------------------------ 201 (445)
T 2ovr_B 182 KVWNAETGECIHTLYGHTST------------------------------------------------------------ 201 (445)
T ss_dssp EEEETTTTEEEEEECCCSSC------------------------------------------------------------
T ss_pred EEEECCcCcEEEEECCCCCc------------------------------------------------------------
Confidence 99999999887766554221
Q ss_pred eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511 188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267 (488)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~ 267 (488)
+.++.++++.+++++.|+.|++||+.+++....+.. |...+.++++ +++.++++ +.|+.|+
T Consensus 202 -------------v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~~-~~dg~i~ 262 (445)
T 2ovr_B 202 -------------VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMG---HVAAVRCVQY--DGRRVVSG-AYDFMVK 262 (445)
T ss_dssp -------------EEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEEC---CSSCEEEEEE--CSSCEEEE-ETTSCEE
T ss_pred -------------EEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcC---CcccEEEEEE--CCCEEEEE-cCCCEEE
Confidence 223444567789999999999999999987766654 8889999999 67889888 8999999
Q ss_pred EEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cC
Q psy14511 268 LWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NN 346 (488)
Q Consensus 268 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~ 346 (488)
+||+++++.+..+.+|...+.++.++++.+++++.||.|++||++++ .....+..|...+.++.+ +++++++++ |+
T Consensus 263 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 339 (445)
T 2ovr_B 263 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMEL--KDNILVSGNADS 339 (445)
T ss_dssp EEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTC-CEEEEECCCCSCEEEEEE--ETTEEEEEETTS
T ss_pred EEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCC-CEEEEEcCCcccEEEEEE--eCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999986 466778889988888877 467899888 69
Q ss_pred eEEEEECCCCCCCcccce------eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE-----eeccccEEEEEEcC
Q psy14511 347 TVKIWDFRQLDAKRPLGL------IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL-----KIHQERILSAVLSP 415 (488)
Q Consensus 347 ~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~s~ 415 (488)
.|++||+++++....+.. .+.++..+++++++ |+.||.|++||+.+++.+..+ .+|.+.|++++|+|
T Consensus 340 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 340 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVIT--SSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp CEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEE--EETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred eEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEE--EeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecC
Confidence 999999988765444332 13355557889888 789999999999999999888 46888999999999
Q ss_pred CCCEEEEEeCCCc----EEEEecCCC
Q psy14511 416 DQTCVAAASADET----ISIWNCFPR 437 (488)
Q Consensus 416 ~~~~l~t~~~dg~----v~iw~~~~~ 437 (488)
++.+||+++.||. |.+||+...
T Consensus 418 ~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 418 TKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp SEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CEEEEEEcccCCCCccEEEEEECCCC
Confidence 9999999999998 999999764
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-40 Score=300.45 Aligned_cols=285 Identities=16% Similarity=0.238 Sum_probs=242.2
Q ss_pred eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511 30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR 108 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~ 108 (488)
..+.+|.+.|++++|+|++++|++++ |+.|++||+.+++ .+..+.+|...|.+++|+|+++++++++. |+.|+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~ 99 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE---RLGTLDGHTGTIWSIDVDCFTKYCVTGSA---DYSIK 99 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEET---TTEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch---hhhhhhhcCCcEEEEEEcCCCCEEEEEeC---CCeEE
Confidence 45789999999999999999999998 9999999998743 45567789999999999999998887776 99999
Q ss_pred EEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCce
Q psy14511 109 LWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPER 188 (488)
Q Consensus 109 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (488)
+||+.+++.+..+
T Consensus 100 iwd~~~~~~~~~~------------------------------------------------------------------- 112 (369)
T 3zwl_B 100 LWDVSNGQCVATW------------------------------------------------------------------- 112 (369)
T ss_dssp EEETTTCCEEEEE-------------------------------------------------------------------
T ss_pred EEECCCCcEEEEe-------------------------------------------------------------------
Confidence 9999876643221
Q ss_pred eecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----
Q psy14511 189 ILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----- 263 (488)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----- 263 (488)
. +...+.+++|+|++++++++ +.+
T Consensus 113 ----------------------------------------------~----~~~~v~~~~~~~~~~~l~~~-~~~~~~~~ 141 (369)
T 3zwl_B 113 ----------------------------------------------K----SPVPVKRVEFSPCGNYFLAI-LDNVMKNP 141 (369)
T ss_dssp ----------------------------------------------E----CSSCEEEEEECTTSSEEEEE-ECCBTTBC
T ss_pred ----------------------------------------------e----cCCCeEEEEEccCCCEEEEe-cCCccCCC
Confidence 1 45579999999999999998 777
Q ss_pred CcEEEEECCcce-----------eeeeeccccc--cEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccE
Q psy14511 264 EYIDLWHEQEER-----------LIQKLRTHMH--QVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVV 328 (488)
Q Consensus 264 ~~i~i~d~~~~~-----------~~~~~~~~~~--~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i 328 (488)
+.|++||+.... ....+..|.. .+.+++| +++.+++++.||.|++||+++.......+..|...|
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 221 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI 221 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE
T ss_pred CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce
Confidence 999999987653 2334445555 8999999 689999999999999999998656788888999999
Q ss_pred EEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCC--------------eEEE
Q psy14511 329 CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDC--------------SLKM 389 (488)
Q Consensus 329 ~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~--------------~i~i 389 (488)
.+++|+|++++|++++ |+.|++||+++.+....+... ...|+|+++++++ ++.++ .+++
T Consensus 222 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~i~~ 299 (369)
T 3zwl_B 222 SDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIIL--GGGQEAKDVTTTSANEGKFEARF 299 (369)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEE--EECCC-------------CEEEE
T ss_pred eEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEE--eecCCCceEEEEecCCCcceeEE
Confidence 9999999999999998 699999999987554443321 2299999999999 45555 8999
Q ss_pred EeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511 390 WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK 440 (488)
Q Consensus 390 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~ 440 (488)
||..+++.+..+.+|...|++++|+|++++|++++.||.|++|++.++...
T Consensus 300 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 300 YHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred EecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence 999999999999999999999999999999999999999999999876543
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.4e-40 Score=302.20 Aligned_cols=287 Identities=15% Similarity=0.175 Sum_probs=227.8
Q ss_pred ceeecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEec-CCCeEEeeeCCcccc
Q psy14511 29 PTAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP-WEPTLLATGGGICDQ 105 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~~d~ 105 (488)
...+.+|...|++++|+|++ ++||+|+ |+.|+|||+.+++.. ......+|...|.+++|+| +++++++++. |+
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d~ 141 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT-SFIQGMGPGDAITGMKFNQFNTNQLFVSSI---RG 141 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE-EEECCCSTTCBEEEEEEETTEEEEEEEEET---TT
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc-eeeecCCcCCceeEEEeCCCCCCEEEEEeC---CC
Confidence 34568999999999999999 9999998 999999999875433 2223357999999999999 5666666655 99
Q ss_pred eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511 106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK 185 (488)
Q Consensus 106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (488)
.|++||+.+.. ...+..
T Consensus 142 ~i~iwd~~~~~-~~~~~~-------------------------------------------------------------- 158 (383)
T 3ei3_B 142 ATTLRDFSGSV-IQVFAK-------------------------------------------------------------- 158 (383)
T ss_dssp EEEEEETTSCE-EEEEEC--------------------------------------------------------------
T ss_pred EEEEEECCCCc-eEEEec--------------------------------------------------------------
Confidence 99999987422 111111
Q ss_pred CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc
Q psy14511 186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY 265 (488)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 265 (488)
... +...+.+++|+|+++.++++ +.|+.
T Consensus 159 --------------------------------------------------~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~ 186 (383)
T 3ei3_B 159 --------------------------------------------------TDS-WDYWYCCVDVSVSRQMLATG-DSTGR 186 (383)
T ss_dssp --------------------------------------------------CCC-SSCCEEEEEEETTTTEEEEE-ETTSE
T ss_pred --------------------------------------------------cCC-CCCCeEEEEECCCCCEEEEE-CCCCC
Confidence 011 55789999999999999999 99999
Q ss_pred EEEEECCcceeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcCCCc--cceeeecCCccEEEEEEcc-CCcE
Q psy14511 266 IDLWHEQEERLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRTHSD--YPTAITREGDVVCGLKWSP-NGRY 339 (488)
Q Consensus 266 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~s~-~~~~ 339 (488)
|++||+ .++.+..+..|...|.+++| +++ ++++++.|+.|++||+++... .......|...|.+++|+| ++++
T Consensus 187 i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 187 LLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTK 265 (383)
T ss_dssp EEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCE
T ss_pred EEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCE
Confidence 999999 46788889999999999999 456 899999999999999987431 2222337899999999999 9999
Q ss_pred EEEEe-cCeEEEEECCCCCCCccccee-----------eeeecCCCCEEEEE-------ccCCCCeEEEEeCCCcceeEE
Q psy14511 340 LASGS-NNTVKIWDFRQLDAKRPLGLI-----------VPKLKREGRELVTS-------HGKQDCSLKMWEYPRLHLIEE 400 (488)
Q Consensus 340 l~~~~-d~~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~-------~g~~~~~i~i~d~~~~~~~~~ 400 (488)
|++++ |+.|++||+++.+....+... ...|+|++..++++ +++.|+.|++||+.+++++..
T Consensus 266 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 266 LLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp EEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEE
T ss_pred EEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeee
Confidence 99999 699999999987654433211 11444444444432 367899999999999999999
Q ss_pred Eee--ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511 401 LKI--HQERILSAVLSPDQTCVAAASADETISIWNCFP 436 (488)
Q Consensus 401 ~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~ 436 (488)
+.+ |...+..++|+|++++|++++ ||.|++||+++
T Consensus 346 l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 346 LRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp ECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 987 456788889999999999997 99999999875
No 44
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-40 Score=293.39 Aligned_cols=289 Identities=17% Similarity=0.290 Sum_probs=211.3
Q ss_pred ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccc-cc-cccceeEEEEecCCCeEEeeeCCcccc
Q psy14511 29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNN-QC-HLSAVKAIAWCPWEPTLLATGGGICDQ 105 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~l~~~~~~~~d~ 105 (488)
...+.+|.+.|.+++|+|+ +||+|+ |+.|++||+.++.. .....+ .+ |...|.+++|+|++++|++++. |+
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~---D~ 80 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF-TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF---DS 80 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC-EEEEEECTTCCCSCEEEEEECTTSSEEEEEET---TS
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe-EEEEEEecCCccCCEEEEEECCCCCEEEEEeC---CC
Confidence 3567899999999999998 999998 99999999986431 122223 33 9999999999999987777766 99
Q ss_pred eEEEEecCCCe-------eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511 106 TVRLWNSMNGK-------EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL 178 (488)
Q Consensus 106 ~i~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
+|++||+.... ....+..+..
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~---------------------------------------------------- 108 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHEN---------------------------------------------------- 108 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC--------------------------------------------------------
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCC----------------------------------------------------
Confidence 99999985422 1222222211
Q ss_pred cccccCCCceeecCCCccccceeeeeeeCC--CcEEEEECCCeEEEEECCCC-c-eEEEEecCCCCCCceEEEEEcCCCC
Q psy14511 179 PRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLAVALDTSVYTWNTKTN-K-TQLLVEYPTYDNAYISCVAWKPRTT 254 (488)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~v~iw~~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~ 254 (488)
.+.++.|++ ..+++++.|+.|++||+... . ......+.+ |...|.+++|+|+++
T Consensus 109 ---------------------~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 109 ---------------------EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEA 166 (330)
T ss_dssp ---------------------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSS
T ss_pred ---------------------cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCC
Confidence 233344443 46778889999999999532 2 222333444 889999999999999
Q ss_pred eEEEEeCCCCcEEEEECCcc--eeeeeeccccccEEEEEec----CCEEEEeecCCeEEEEECcCCC-------ccceee
Q psy14511 255 DLAVTNTCTEYIDLWHEQEE--RLIQKLRTHMHQVIAMCWN----GNLLSCGTIGGNILHYDVRTHS-------DYPTAI 321 (488)
Q Consensus 255 ~l~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~ 321 (488)
+|+++ +.|+.|++||...+ +++..+.+|...|.+++|+ +..+++++.|+.|++||++... .....+
T Consensus 167 ~l~s~-s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 245 (330)
T 2hes_X 167 LLASS-SYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAIL 245 (330)
T ss_dssp EEEEE-ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEEE-cCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeec
Confidence 99999 99999999998765 6788899999999999993 4689999999999999987542 122233
Q ss_pred ec-CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCccee-
Q psy14511 322 TR-EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI- 398 (488)
Q Consensus 322 ~~-~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~- 398 (488)
.. |...|.+++|++++ +|++++ |+.|++||..+++ .+.+
T Consensus 246 ~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~-------------------------------------~~~~~ 287 (330)
T 2hes_X 246 PDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE-------------------------------------WKVFA 287 (330)
T ss_dssp CSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE-------------------------------------EEEEE
T ss_pred ccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc-------------------------------------eEEEe
Confidence 33 88899999999766 666666 6888888764320 0112
Q ss_pred EEEeeccc-cEEEEEEcC--CCCEEEEEeCCCcEEEEecCC
Q psy14511 399 EELKIHQE-RILSAVLSP--DQTCVAAASADETISIWNCFP 436 (488)
Q Consensus 399 ~~~~~~~~-~v~~~~~s~--~~~~l~t~~~dg~v~iw~~~~ 436 (488)
..+.+|.. .|++++|+| ++++||+++.||.|++|++++
T Consensus 288 ~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 288 KRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 22356776 899999999 789999999999999999865
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.9e-40 Score=296.09 Aligned_cols=318 Identities=14% Similarity=0.202 Sum_probs=257.3
Q ss_pred cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511 35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM 113 (488)
Q Consensus 35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~ 113 (488)
|.++|.+++|+|||++++++. ++.+.+|+.... . ......+|...|.+++|+|+++++++ ++ |+.|++||+.
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~h~~~v~~~~~~~~~~~l~~-~~---dg~i~iw~~~ 80 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH--A-RQINTLNHGEVVCAVTISNPTRHVYT-GG---KGCVKVWDIS 80 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE--E-EEEEEECCSSCCCEEEECSSSSEEEE-EC---BSEEEEEETT
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCc--c-ccceeccCCCceEEEEEecCCcEEEE-cC---CCeEEEEECC
Confidence 567899999999999999887 666666654432 1 22223469999999999999976554 54 9999999997
Q ss_pred CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511 114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP 193 (488)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (488)
+++....+
T Consensus 81 ~~~~~~~~------------------------------------------------------------------------ 88 (337)
T 1gxr_A 81 HPGNKSPV------------------------------------------------------------------------ 88 (337)
T ss_dssp STTCCSCS------------------------------------------------------------------------
T ss_pred CCCceeee------------------------------------------------------------------------
Confidence 65421110
Q ss_pred CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511 194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273 (488)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~ 273 (488)
......+ +...+.+++|+|++++++++ +.++.|++||+.+
T Consensus 89 --------------------------------------~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~ 128 (337)
T 1gxr_A 89 --------------------------------------SQLDCLN-RDNYIRSCKLLPDGCTLIVG-GEASTLSIWDLAA 128 (337)
T ss_dssp --------------------------------------EEEECSC-TTSBEEEEEECTTSSEEEEE-ESSSEEEEEECCC
T ss_pred --------------------------------------ecccccC-CCCcEEEEEEcCCCCEEEEE-cCCCcEEEEECCC
Confidence 1111112 77889999999999999999 8999999999998
Q ss_pred ce--eeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeE
Q psy14511 274 ER--LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 348 (488)
Q Consensus 274 ~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i 348 (488)
++ ....+..|...+.+++| +++.+++++.||.|++||++++ .....+..|...+.+++|+|++++|++++ |+.|
T Consensus 129 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 207 (337)
T 1gxr_A 129 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 207 (337)
T ss_dssp C--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC-ceeeeeecccCceEEEEECCCCCEEEEEecCCcE
Confidence 76 56677889999999999 6889999999999999999885 46677888999999999999999999998 6999
Q ss_pred EEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511 349 KIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS 424 (488)
Q Consensus 349 ~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~ 424 (488)
++||+++.+....+... ..+|+|+++.+++ ++.++.|++||+.+++. ..+..|...|.+++|+|++++|++++
T Consensus 208 ~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 208 RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAV--GMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECTTSSEEEE--EETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCceEeeecCCCceEEEEECCCCCEEEE--EcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEec
Confidence 99999987544333211 2289999999999 78899999999998775 46778999999999999999999999
Q ss_pred CCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511 425 ADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT 482 (488)
Q Consensus 425 ~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~ 482 (488)
.||.|++||+.+++......+...+.+++|+|+++.+. .+..+..+.++..
T Consensus 285 ~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-------~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 285 KDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIV-------TGSGDKKATVYEV 335 (337)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEE-------EEETTSCEEEEEE
T ss_pred CCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEE-------EecCCCeEEEEEE
Confidence 99999999999999887778899999999999998763 3345555555543
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-41 Score=310.74 Aligned_cols=322 Identities=13% Similarity=0.259 Sum_probs=256.3
Q ss_pred ceEEEEEEccCCc-EEEEe----------c-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511 37 DVVCGLKWSPNGR-YLASG----------S-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD 104 (488)
Q Consensus 37 ~~V~~l~~sp~g~-~las~----------~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d 104 (488)
..|.+++|+|+|+ +||++ + |+.|+|||+.++...+.+..+ .|...|.+++|+|++++|++++. |
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~---d 88 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALD---N 88 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEES---S
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEcc---C
Confidence 4688999999997 99998 6 899999999876544344333 58899999999999998877776 9
Q ss_pred ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511 105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA 184 (488)
Q Consensus 105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
+.|++||+.+....
T Consensus 89 g~v~vw~~~~~~~~------------------------------------------------------------------ 102 (416)
T 2pm9_A 89 GSLELYSTNEANNA------------------------------------------------------------------ 102 (416)
T ss_dssp SCEEEECCSSTTSC------------------------------------------------------------------
T ss_pred CeEEEeeccccccc------------------------------------------------------------------
Confidence 99999998752100
Q ss_pred CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC-CCeEEEEeCCC
Q psy14511 185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR-TTDLAVTNTCT 263 (488)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~ 263 (488)
.+ ....+.+ |...|.+++|+|+ +++++++ +.|
T Consensus 103 -------------------------------------------~~--~~~~~~~-h~~~v~~~~~~~~~~~~l~s~-~~d 135 (416)
T 2pm9_A 103 -------------------------------------------IN--SMARFSN-HSSSVKTVKFNAKQDNVLASG-GNN 135 (416)
T ss_dssp -------------------------------------------CC--EEEECCC-SSSCCCEEEECSSSTTBEEEE-CSS
T ss_pred -------------------------------------------cc--chhhccC-CccceEEEEEcCCCCCEEEEE-cCC
Confidence 00 1112222 7889999999998 7888888 999
Q ss_pred CcEEEEECCcce------eeee---eccccccEEEEEe--c-CCEEEEeecCCeEEEEECcCCCccceeeecC------C
Q psy14511 264 EYIDLWHEQEER------LIQK---LRTHMHQVIAMCW--N-GNLLSCGTIGGNILHYDVRTHSDYPTAITRE------G 325 (488)
Q Consensus 264 ~~i~i~d~~~~~------~~~~---~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~ 325 (488)
+.|++||+.+++ .... ...|...+.+++| + +.++++++.||.|++||+++.+ ....+..+ .
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK-EVIHLSYTSPNSGIK 214 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE-EEEEECCCCCSSCCC
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-cceEEeccccccccC
Confidence 999999998876 3333 3678899999999 4 6899999999999999999864 45555554 7
Q ss_pred ccEEEEEEccCC-cEEEEEe-cC---eEEEEECCCCC-CCcccc-ee-----eeeecC-CCCEEEEEccCCCCeEEEEeC
Q psy14511 326 DVVCGLKWSPNG-RYLASGS-NN---TVKIWDFRQLD-AKRPLG-LI-----VPKLKR-EGRELVTSHGKQDCSLKMWEY 392 (488)
Q Consensus 326 ~~i~~~~~s~~~-~~l~~~~-d~---~i~iwd~~~~~-~~~~~~-~~-----~~~~~~-~~~~l~~~~g~~~~~i~i~d~ 392 (488)
..|.+++|+|++ .++++++ ++ .|++||+++.. ....+. .. ..+|+| +++++++ ++.|+.|++||+
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s--~~~dg~v~~wd~ 292 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLS--SGRDNTVLLWNP 292 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEE--EESSSEEEEECS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEE--EeCCCCEEEeeC
Confidence 889999999997 6888888 47 99999999863 333332 11 228999 8999999 788999999999
Q ss_pred CCcceeEEEeeccccEEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCccccc----------------------------
Q psy14511 393 PRLHLIEELKIHQERILSAVLSPDQ-TCVAAASADETISIWNCFPRDKKRKA---------------------------- 443 (488)
Q Consensus 393 ~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~t~~~dg~v~iw~~~~~~~~~~~---------------------------- 443 (488)
.+++++..+.+|...|++++|+|++ ++|++++.||.|++|++.+.+.....
T Consensus 293 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (416)
T 2pm9_A 293 ESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPS 372 (416)
T ss_dssp SSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCC
T ss_pred CCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccc
Confidence 9999999999999999999999999 89999999999999999877643211
Q ss_pred --------cccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeecc
Q psy14511 444 --------RQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFG 485 (488)
Q Consensus 444 --------~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g 485 (488)
.+..++.+++|+|+|+.+ +.+..+..+.||..+++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~s~dg~~l-------a~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 373 VFHLQAPTWYGEPSPAAHWAFGGKLV-------QITPDGKGVSITNPKIS 415 (416)
T ss_dssp SSCCCCCSTTCCCSCCCEEETTTEEE-------CBCTTSSCBCCBCCCCC
T ss_pred cccccCCccccCCccceEEeeCCeEE-------EEeCCCCeEEEEEeccC
Confidence 145677899999999877 55667777777776654
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.6e-40 Score=308.34 Aligned_cols=290 Identities=15% Similarity=0.176 Sum_probs=224.8
Q ss_pred eeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEec-CCCeEEeeeCCcccce
Q psy14511 30 TAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP-WEPTLLATGGGICDQT 106 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~~d~~ 106 (488)
....+|...|+||+|+| ++++||+|+ ||.|+|||+.+++. .....+.+|.+.|++|+|+| ++.+|++++. |++
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~---D~~ 188 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-PTFIKGIGAGGSITGLKFNPLNTNQFYASSM---EGT 188 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-CEEECCCSSSCCCCEEEECSSCTTEEEEECS---SSC
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-eeEEEccCCCCCEEEEEEeCCCCCEEEEEeC---CCE
Confidence 34567888999999999 677999998 99999999987543 33445678999999999998 5666666555 999
Q ss_pred EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511 107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP 186 (488)
Q Consensus 107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
|++||++++.... +.
T Consensus 189 v~iwd~~~~~~~~-~~---------------------------------------------------------------- 203 (435)
T 4e54_B 189 TRLQDFKGNILRV-FA---------------------------------------------------------------- 203 (435)
T ss_dssp EEEEETTSCEEEE-EE----------------------------------------------------------------
T ss_pred EEEeeccCCceeE-Ee----------------------------------------------------------------
Confidence 9999986543211 10
Q ss_pred ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511 187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI 266 (488)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i 266 (488)
.... +...+.+++|+|++++|+++ +.||.|
T Consensus 204 ------------------------------------------------~~~~-~~~~~~~~~~~~~~~~l~~g-~~dg~i 233 (435)
T 4e54_B 204 ------------------------------------------------SSDT-INIWFCSLDVSASSRMVVTG-DNVGNV 233 (435)
T ss_dssp ------------------------------------------------CCSS-CSCCCCCEEEETTTTEEEEE-CSSSBE
T ss_pred ------------------------------------------------ccCC-CCccEEEEEECCCCCEEEEE-eCCCcE
Confidence 0001 44567889999999999999 999999
Q ss_pred EEEECCcceeeeeeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCcc--ceeeecCCccEEEEEEccCCcEEE
Q psy14511 267 DLWHEQEERLIQKLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDY--PTAITREGDVVCGLKWSPNGRYLA 341 (488)
Q Consensus 267 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~ 341 (488)
++||++. +.+..+.+|...|.+++| ++ .++++++.|+.|++||+++.... .....+|...|.+++|+|+|++|+
T Consensus 234 ~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 234 ILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp EEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred eeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeE
Confidence 9999875 667788899999999999 33 58889999999999999875432 334467899999999999999999
Q ss_pred EEe-cCeEEEEECCCCCCCcccc-----------eeeeeecCCCCEEEEEc----------cCCCCeEEEEeCCCcceeE
Q psy14511 342 SGS-NNTVKIWDFRQLDAKRPLG-----------LIVPKLKREGRELVTSH----------GKQDCSLKMWEYPRLHLIE 399 (488)
Q Consensus 342 ~~~-d~~i~iwd~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~~----------g~~~~~i~i~d~~~~~~~~ 399 (488)
+++ |+.|++||+.+++....+. .....|+|++..++++. +..++.|++||..+++.+.
T Consensus 313 s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 313 TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp EEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred EEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence 999 6999999998875433221 11226777777776641 2345689999999999988
Q ss_pred EEe-eccccEEEE-EEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511 400 ELK-IHQERILSA-VLSPDQTCVAAASADETISIWNCFPRDKK 440 (488)
Q Consensus 400 ~~~-~~~~~v~~~-~~s~~~~~l~t~~~dg~v~iw~~~~~~~~ 440 (488)
.+. +|...|.++ +|+|+|++||+|+ |+.|+||++++++.+
T Consensus 393 ~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 393 QLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp EECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 765 677788887 6999999999886 889999999988754
No 48
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-40 Score=308.55 Aligned_cols=345 Identities=13% Similarity=0.159 Sum_probs=243.6
Q ss_pred cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccc---cCcCCCccccc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQ---LDAKRPQVNNQ 77 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~---~~~~~~~~~~~ 77 (488)
.+++.+++++ .|+. +++.+.....+|.+.|++++|+| ++++||+|+ |+.|+|||+.+ +...+....+
T Consensus 37 ~~~~~~~~~~------~w~~-~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~- 108 (437)
T 3gre_A 37 PIQEIVRSPN------MGNL-RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY- 108 (437)
T ss_dssp CCCCCCCCCC------GGGC-CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-
T ss_pred Cccccccccc------cccc-cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-
Confidence 3666666654 3774 34434444489999999999999 999999998 99999999987 3322222222
Q ss_pred ccccceeEEEEecCCCeEEeeeCCcccceEEEEecC---CCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511 78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM---NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID 154 (488)
Q Consensus 78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (488)
+|...|.+++|+|+++++++++. |++|++||+. +++.......+ .+....+.+..
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~----------------- 166 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSK---DGQIIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG----------------- 166 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEET---TSEEEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS-----------------
T ss_pred cCCCCEEEEEEeCCCCEEEEEeC---CCEEEEEEeccccCCceeeccccc--eeEEEEccCcc-----------------
Confidence 59999999999999988877776 9999999995 45444333322 11111111100
Q ss_pred ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee--e--CCCcEEEEECCCeEEEEECCCCce
Q psy14511 155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD--W--GYHDTLAVALDTSVYTWNTKTNKT 230 (488)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~d~~v~iw~~~~~~~ 230 (488)
....+..+. + ++..+++++.|+.|++||+.+++.
T Consensus 167 ------------------------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 167 ------------------------------------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER 204 (437)
T ss_dssp ------------------------------------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE
T ss_pred ------------------------------------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Confidence 000111111 1 234677888999999999999998
Q ss_pred EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-cccccEEEEEe------cCCEEEEeecC
Q psy14511 231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-THMHQVIAMCW------NGNLLSCGTIG 303 (488)
Q Consensus 231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~------~~~~l~~~~~d 303 (488)
...+.... |...|++++|+|++++++++ +.||.|++||+++++++..+. .|...|.++++ ++.++++++.|
T Consensus 205 ~~~~~~~~-h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d 282 (437)
T 3gre_A 205 LQIIENSP-RHGAVSSICIDEECCVLILG-TTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK 282 (437)
T ss_dssp EEEEECCG-GGCCEEEEEECTTSCEEEEE-ETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT
T ss_pred eEEEccCC-CCCceEEEEECCCCCEEEEE-cCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC
Confidence 88777644 67899999999999999999 999999999999999988886 78889999966 35699999999
Q ss_pred CeEEEEECcCCCccceeeec--------------------------CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511 304 GNILHYDVRTHSDYPTAITR--------------------------EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL 356 (488)
Q Consensus 304 g~i~i~d~~~~~~~~~~~~~--------------------------~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~ 356 (488)
|.|++||++++. ....+.. |...|.+++|+ ++++|++++ |+.|++||+.++
T Consensus 283 g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 283 TFLTIWNFVKGH-CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp EEEEEEETTTTE-EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred CcEEEEEcCCCc-EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 999999998754 2222221 66678899999 778999999 699999999988
Q ss_pred CCCcccceee--------eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCC--CCEEEEEeCC
Q psy14511 357 DAKRPLGLIV--------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD--QTCVAAASAD 426 (488)
Q Consensus 357 ~~~~~~~~~~--------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~t~~~d 426 (488)
+....+.... ..+++...+++. . |+............|.+.|++++|+++ +.+|++|+.|
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d 430 (437)
T 3gre_A 361 SSSKAVISPSRFSDVFIPTQVTANLTMLLR--K--------MKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS 430 (437)
T ss_dssp GGCEEEECC--CCCEEEEEEEETTEEEEEE--E--------CC-------------CCCEEEEEEEESSSSEEEEEEETT
T ss_pred ccceEEecccccCceEEEEEeecceEEEEE--e--------cccccccccCcccccccceeeEeeeccCCceEEEEEcCC
Confidence 6544433221 133333333332 1 223334444556679999999999998 7899999999
Q ss_pred CcEEEEe
Q psy14511 427 ETISIWN 433 (488)
Q Consensus 427 g~v~iw~ 433 (488)
|.|++|+
T Consensus 431 G~I~iw~ 437 (437)
T 3gre_A 431 GLIGIFQ 437 (437)
T ss_dssp SCEEEEC
T ss_pred ceEEEeC
Confidence 9999995
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=302.43 Aligned_cols=305 Identities=16% Similarity=0.217 Sum_probs=241.9
Q ss_pred cCCeEEEEEcccCcccceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCccc----------ccccc
Q psy14511 13 IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVN----------NQCHL 80 (488)
Q Consensus 13 ~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~----------~~~h~ 80 (488)
.++.+++|+....+. ...+.+|.+.|++++|+| ++++||+++ |+.|++||+.+++....... ..+|.
T Consensus 21 ~~~~~~v~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
T 4a11_B 21 AESTRRVLGLELNKD-RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR 99 (408)
T ss_dssp HHHHHHHHTEEECTT-EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS
T ss_pred ccCcceeeccccCcc-eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC
Confidence 355678898887764 467889999999999999 999999998 99999999987654433221 13599
Q ss_pred cceeEEEEec-CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 81 SAVKAIAWCP-WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 81 ~~v~~l~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
..|.+++|+| ++..+++++. |+.|++||+.+++....+
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~-------------------------------------- 138 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSF---DKTLKVWDTNTLQTADVF-------------------------------------- 138 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEET---TSEEEEEETTTTEEEEEE--------------------------------------
T ss_pred CcEEEEEEccCCCcEEEEEeC---CCeEEEeeCCCCccceec--------------------------------------
Confidence 9999999999 5556666555 999999999876643221
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY 239 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~ 239 (488)
.
T Consensus 139 ---------------------------------------------------------------------------~---- 139 (408)
T 4a11_B 139 ---------------------------------------------------------------------------N---- 139 (408)
T ss_dssp ---------------------------------------------------------------------------E----
T ss_pred ---------------------------------------------------------------------------c----
Confidence 1
Q ss_pred CCCceEEEEEcCCC---CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcC
Q psy14511 240 DNAYISCVAWKPRT---TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRT 313 (488)
Q Consensus 240 ~~~~i~~~~~~~~~---~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~ 313 (488)
+...+.++.++|.+ ..++++ +.++.|++||+++++.+..+..|...|.+++| +++ ++++++.||.|++||++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 140 FEETVYSHHMSPVSTKHCLVAVG-TRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp CSSCEEEEEECSSCSSCCEEEEE-ESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred CCCceeeeEeecCCCCCcEEEEE-cCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 44567788888754 478888 99999999999999999999999999999999 455 699999999999999987
Q ss_pred CCccceee---------------ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----------ee
Q psy14511 314 HSDYPTAI---------------TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----------VP 367 (488)
Q Consensus 314 ~~~~~~~~---------------~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----------~~ 367 (488)
.......+ ..|...|.+++|+|++++|++++ |+.|++||+.+++........ ..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (408)
T 4a11_B 219 ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFT 298 (408)
T ss_dssp SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCE
T ss_pred CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeE
Confidence 65444443 57888999999999999999998 699999999987654332211 01
Q ss_pred eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR 441 (488)
Q Consensus 368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~ 441 (488)
.....+..+++ +..++.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++||+.++++..
T Consensus 299 ~~~~~~~~~~~--~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 299 VSCGCSSEFVF--VPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp ECCSSSSCEEE--EEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred EecCCCceEEE--EecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 22233344444 4668999999999999999999999999999999999999999999999999999988764
No 50
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.9e-39 Score=303.10 Aligned_cols=327 Identities=17% Similarity=0.196 Sum_probs=244.5
Q ss_pred cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccccccc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS 81 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~ 81 (488)
+++++|++|+.||+|++||+.+++.+ ..+.+|.+.|.+++|+|++ +|++|+ |++|++||+++++ .+..+.+|.+
T Consensus 130 ~~~~~l~sgs~dg~i~vwd~~~~~~~-~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~---~~~~~~~h~~ 204 (464)
T 3v7d_B 130 FEDNYVITGADDKMIRVYDSINKKFL-LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC---CTHVFEGHNS 204 (464)
T ss_dssp EETTEEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE---EEEEECCCSS
T ss_pred ECCCEEEEEcCCCcEEEEECCCCcEE-EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc---EEEEECCCCC
Confidence 47899999999999999999998844 6688999999999999998 888887 9999999998754 4455778999
Q ss_pred ceeEEEEec--CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 82 AVKAIAWCP--WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 82 ~v~~l~~~~--~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
.|.+++|++ +++++++++. |++|++||+.++............. .....+.. ... ..
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~-~~-------------- 263 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSR---DNTLHVWKLPKESSVPDHGEEHDYP-LVFHTPEE--NPY-FV-------------- 263 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEET---TSCEEEEECCCCCCC------CCSS-EEESCGGG--CTT-EE--------------
T ss_pred ccEEEEEecCCCCCEEEEEcC---CCcEEEeeCCCCcccccccccCCcc-eEeeccCC--CeE-EE--------------
Confidence 999999984 6666666665 9999999998776543322211100 00000000 000 00
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY 239 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~ 239 (488)
... ......+..+...++.+++++.|+.|++||+.+++....+..
T Consensus 264 ----------------------------~~~----~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--- 308 (464)
T 3v7d_B 264 ----------------------------GVL----RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG--- 308 (464)
T ss_dssp ----------------------------EEE----CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC---
T ss_pred ----------------------------EEc----cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---
Confidence 000 001122333455667888999999999999999887666543
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccce
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPT 319 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 319 (488)
|...|.+++|+|+++.++++ +.|+.|++||+++++.+..+.+|...+.++.++++++++++.||.|++||+++....
T Consensus 309 ~~~~v~~~~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~-- 385 (464)
T 3v7d_B 309 HTDRIYSTIYDHERKRCISA-SMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK-- 385 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE--
T ss_pred CCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCcee--
Confidence 88999999999999999999 999999999999999999999999999999999999999999999999999875422
Q ss_pred eeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511 320 AITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE 399 (488)
Q Consensus 320 ~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~ 399 (488)
....+...+..++|+|+++++++++|+.|++||++ +++++.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~---------------------------------------~g~~~~ 426 (464)
T 3v7d_B 386 FSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR---------------------------------------SGKLVH 426 (464)
T ss_dssp EEEECTTCCCEEEEEECSSEEEEEETTEEEEEETT---------------------------------------TCCEEE
T ss_pred eeecCCCCccEEEEEeCCCEEEEecCCeEEEEECC---------------------------------------CCcEEe
Confidence 22345566777889999998888866666666655 444444
Q ss_pred E-EeeccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511 400 E-LKIHQERILSAVLSPDQTCVAAASADETISIWN 433 (488)
Q Consensus 400 ~-~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~ 433 (488)
. +..|...|.+++|+ +..++++++.||.+.+|-
T Consensus 427 ~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 427 ANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp SCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred hhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 3 45678899999997 445566666777666554
No 51
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-40 Score=293.09 Aligned_cols=275 Identities=17% Similarity=0.287 Sum_probs=203.5
Q ss_pred cCCceEEEeecCCeEEEEEcccCcc-cceee-cc-cCceEEEEEEccCCcEEEEec-CCeEEEEeccccC----cCCCcc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSD-YPTAI-TR-EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD----AKRPQV 74 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~-~~~~~-~~-h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~----~~~~~~ 74 (488)
+++.+||+|+.|++|+|||+..+.. ....+ .+ |...|.+++|+|++++||+++ |+.|+|||+.... ....+.
T Consensus 22 ~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~ 101 (330)
T 2hes_X 22 FSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLA 101 (330)
T ss_dssp EETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEE
T ss_pred cCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEE
Confidence 4456999999999999999987532 22334 44 999999999999999999998 9999999986422 123345
Q ss_pred cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCC----eeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511 75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG----KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG 150 (488)
Q Consensus 75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (488)
.+.+|...|.+++|+|++++|++++. |++|++||+... +.+..+..+...
T Consensus 102 ~~~~h~~~V~~v~~sp~g~~las~s~---D~~v~iwd~~~~~~~~~~~~~~~~h~~~----------------------- 155 (330)
T 2hes_X 102 IIEGHENEVKGVAWSNDGYYLATCSR---DKSVWIWETDESGEEYECISVLQEHSQD----------------------- 155 (330)
T ss_dssp EEC----CEEEEEECTTSCEEEEEET---TSCEEEEECCTTCCCCEEEEEECCCSSC-----------------------
T ss_pred EEcCCCCcEEEEEECCCCCEEEEEeC---CCEEEEEeccCCCCCeEEEEEeccCCCc-----------------------
Confidence 57889999999999999988877776 999999999532 223333333221
Q ss_pred eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCC
Q psy14511 151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTN 228 (488)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~ 228 (488)
+..+.|+ +..+++++.|+.|++||..++
T Consensus 156 --------------------------------------------------v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 156 --------------------------------------------------VKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp --------------------------------------------------EEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred --------------------------------------------------eEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 2233343 346788889999999999877
Q ss_pred ceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCCcEEEEECCcc--------eeeeeecc-ccccEEEEEe-cCCE
Q psy14511 229 KTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTEYIDLWHEQEE--------RLIQKLRT-HMHQVIAMCW-NGNL 296 (488)
Q Consensus 229 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~i~i~d~~~~--------~~~~~~~~-~~~~v~~~~~-~~~~ 296 (488)
.......+.+ |...|.+++|+|+ +..++++ +.|++|++||+..+ .+...+.. |...|.+++| ++..
T Consensus 186 ~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~-s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~ 263 (330)
T 2hes_X 186 DWECVAVLNG-HEGTVWSSDFDKTEGVFRLCSG-SDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGL 263 (330)
T ss_dssp EEEEEEEECC-CSSCEEEEEECCSSSSCEEEEE-ETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSC
T ss_pred CeeEEEEccC-CCCcEEEEEecCCCCeeEEEEE-eCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCE
Confidence 5444445556 8999999999998 6678888 99999999998764 34455554 8999999999 5678
Q ss_pred EEEeecCCeEEEEECcCCC-ccc-eeeecCCc-cEEEEEEcc--CCcEEEEEe-cCeEEEEECCC
Q psy14511 297 LSCGTIGGNILHYDVRTHS-DYP-TAITREGD-VVCGLKWSP--NGRYLASGS-NNTVKIWDFRQ 355 (488)
Q Consensus 297 l~~~~~dg~i~i~d~~~~~-~~~-~~~~~~~~-~i~~~~~s~--~~~~l~~~~-d~~i~iwd~~~ 355 (488)
|++++.||.|++||..++. ... .....|.. .|.+++|+| ++++|++++ |+.|++||+++
T Consensus 264 l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 264 IASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 9999999999999987653 122 23356776 899999999 789999998 69999999864
No 52
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-40 Score=301.80 Aligned_cols=279 Identities=19% Similarity=0.268 Sum_probs=220.7
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc----CCCcccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA----KRPQVNN 76 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~----~~~~~~~ 76 (488)
+.||++||+|+.||+|+|||+.+++.. ..+..|...|.+++|+|+|++||+|+ |+.|++||+.+... ......+
T Consensus 75 sp~~~~l~s~s~D~~v~iWd~~~~~~~-~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 153 (380)
T 3iz6_a 75 TPEKNWIVSASQDGRLIVWNALTSQKT-HAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVL 153 (380)
T ss_dssp CTTSSCEEEEETTSEEEEEETTTTEEE-EEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBC
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCccc-eEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeec
Confidence 348999999999999999999988744 66889999999999999999999999 99999999975321 2234457
Q ss_pred cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccc
Q psy14511 77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK 156 (488)
Q Consensus 77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (488)
.+|.+.|.++.|.|++...+++++. |++|++||+.+++.+..+......
T Consensus 154 ~gh~~~v~~~~~~~~~~~~l~s~s~--D~~i~~wd~~~~~~~~~~~~~~~~----------------------------- 202 (380)
T 3iz6_a 154 TGHKGYASSCQYVPDQETRLITGSG--DQTCVLWDVTTGQRISIFGSEFPS----------------------------- 202 (380)
T ss_dssp CCCSSCCCCCBCCSSSSSCEEEECT--TSCEEEECTTTCCEEEEECCCSSS-----------------------------
T ss_pred cCCCcceEEEEEecCCCCEEEEECC--CCcEEEEEcCCCcEEEEeecccCC-----------------------------
Confidence 8899999999999986654555553 999999999998876554221000
Q ss_pred ceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee---CCCcEEEEECCCeEEEEECCC-CceEE
Q psy14511 157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW---GYHDTLAVALDTSVYTWNTKT-NKTQL 232 (488)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~v~iw~~~~-~~~~~ 232 (488)
.....+..+.+ .++.+++++.|+.|++||++. ++...
T Consensus 203 ---------------------------------------~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~ 243 (380)
T 3iz6_a 203 ---------------------------------------GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR 243 (380)
T ss_dssp ---------------------------------------SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE
T ss_pred ---------------------------------------CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE
Confidence 00011222232 235678888999999999974 34444
Q ss_pred EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-------ccEEEEEe--cCCEEEEeecC
Q psy14511 233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-------HQVIAMCW--NGNLLSCGTIG 303 (488)
Q Consensus 233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~--~~~~l~~~~~d 303 (488)
.+ .+ |...|.+++|+|++++|+++ +.|++|++||+++++.+..+..+. ..+.+++| +++++++|+.|
T Consensus 244 ~~--~~-h~~~v~~v~~~p~~~~l~s~-s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 244 TY--HG-HEGDINSVKFFPDGQRFGTG-SDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp EE--CC-CSSCCCEEEECTTSSEEEEE-CSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred EE--CC-cCCCeEEEEEecCCCeEEEE-cCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence 33 33 88999999999999999999 999999999999998887775432 24778888 79999999999
Q ss_pred CeEEEEECcCCCccceee----ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511 304 GNILHYDVRTHSDYPTAI----TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL 356 (488)
Q Consensus 304 g~i~i~d~~~~~~~~~~~----~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~ 356 (488)
|.|++||+..++ ....+ .+|...|.+++|+|+|++|++++ |+.|++|++...
T Consensus 320 g~i~vwd~~~~~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 320 GDCYVWDTLLAE-MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp SCEEEEETTTCC-EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCEEEEECCCCc-eEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 999999998764 33333 67999999999999999999999 699999998754
No 53
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.2e-39 Score=288.62 Aligned_cols=269 Identities=18% Similarity=0.302 Sum_probs=224.8
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+.||++||+|+.||.|+|||..+++. ...+.+|...|.+++|+|++++|++++ |+.|++||+.+++ .+..+.+|.
T Consensus 32 s~~~~~l~s~~~dg~i~iw~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~~ 107 (312)
T 4ery_A 32 SPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK---CLKTLKGHS 107 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECCS
T ss_pred CCCCCEEEEeeCCCeEEEEeCCCccc-chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc---EEEEEcCCC
Confidence 34899999999999999999988774 466889999999999999999999998 9999999998743 445577899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
..|.+++|+|+++++++++. |+.|++||+.+++.+..+..+...+.
T Consensus 108 ~~v~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~v~------------------------------- 153 (312)
T 4ery_A 108 NYVFCCNFNPQSNLIVSGSF---DESVRIWDVKTGKCLKTLPAHSDPVS------------------------------- 153 (312)
T ss_dssp SCEEEEEECSSSSEEEEEET---TSCEEEEETTTCCEEEEECCCSSCEE-------------------------------
T ss_pred CCEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCEEEEEecCCCCcEE-------------------------------
Confidence 99999999999988777776 99999999999887766655433222
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVEYPT 238 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~ 238 (488)
.+.|+ +..+++++.|+.|++||+.+++....+...
T Consensus 154 ------------------------------------------~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~- 190 (312)
T 4ery_A 154 ------------------------------------------AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD- 190 (312)
T ss_dssp ------------------------------------------EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS-
T ss_pred ------------------------------------------EEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc-
Confidence 22332 245778889999999999998876655332
Q ss_pred CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEE----EEe-cCCEEEEeecCCeEEEEECcC
Q psy14511 239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA----MCW-NGNLLSCGTIGGNILHYDVRT 313 (488)
Q Consensus 239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~----~~~-~~~~l~~~~~dg~i~i~d~~~ 313 (488)
+...+.+++|+|++++++++ +.|+.|++||+++++.+..+.+|.....+ ... ++.++++|+.||.|++||+.+
T Consensus 191 -~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 191 -DNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp -SCCCEEEEEECTTSSEEEEE-ETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred -CCCceEEEEECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 66789999999999999999 99999999999999999998887654322 222 578999999999999999988
Q ss_pred CCccceeeecCCccEEEEEEccCCcEEEEEe---cCeEEEEECC
Q psy14511 314 HSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFR 354 (488)
Q Consensus 314 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---d~~i~iwd~~ 354 (488)
. .....+.+|...|.+++|+|+++++++++ |+.|++|+.+
T Consensus 269 ~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 269 K-EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp C-CEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred c-hhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 5 46778899999999999999999999986 5999999864
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.7e-38 Score=293.44 Aligned_cols=298 Identities=28% Similarity=0.457 Sum_probs=260.7
Q ss_pred ccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEE
Q psy14511 178 LPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLA 257 (488)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 257 (488)
..+.++..+.+++.+|...++|+.+.++|+.+++++++.|+.|++||..+++....+...+ |...|++++|+|+|++|+
T Consensus 85 ~~r~i~~~p~~~l~ap~~~~d~y~~~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~-~~~~V~sv~fspdg~~la 163 (420)
T 4gga_A 85 TCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLA 163 (420)
T ss_dssp -CCCCCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEE
T ss_pred CCcccCCCCceEEECCCCcccccceeEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecC-CCCcEEEEEECCCCCEEE
Confidence 4456788899999999999999999999999999999999999999999999988888877 888999999999999999
Q ss_pred EEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCC
Q psy14511 258 VTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG 337 (488)
Q Consensus 258 ~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~ 337 (488)
++ +.||.|++||+.+++.+..+.+|...+.++++++..+++|+.|+.+++||..........+.+|...+..+.++|++
T Consensus 164 sg-s~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 164 VG-TSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp EE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred EE-ECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCC
Confidence 99 99999999999999999999999999999999999999999999999999998777778889999999999999999
Q ss_pred cEEEEEe-cCeEEEEECCCCCCCccc-cee--------eeeecCCCC-EEEEEccCCCCeEEEEeCCCcceeEEEeeccc
Q psy14511 338 RYLASGS-NNTVKIWDFRQLDAKRPL-GLI--------VPKLKREGR-ELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406 (488)
Q Consensus 338 ~~l~~~~-d~~i~iwd~~~~~~~~~~-~~~--------~~~~~~~~~-~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~ 406 (488)
+++++++ |+.+++|+..+++..... ... ..+|+|++. .+++++|+.|+.|++||+.+++++..+..| .
T Consensus 243 ~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~ 321 (420)
T 4gga_A 243 RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-S 321 (420)
T ss_dssp SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-S
T ss_pred CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-c
Confidence 9999999 699999999876533211 111 227888654 555656789999999999999999888755 5
Q ss_pred cEEEEEEcCCCCEEEEEe--CCCcEEEEecCCCCcc-ccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEee
Q psy14511 407 RILSAVLSPDQTCVAAAS--ADETISIWNCFPRDKK-RKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTV 483 (488)
Q Consensus 407 ~v~~~~~s~~~~~l~t~~--~dg~v~iw~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 483 (488)
.+.++.|+|+++.+++++ .|+.|++||+.++++. .+.+|.+.|.+++|+|+++.+ +.++.|..+.+|...
T Consensus 322 ~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l-------~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 322 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV-------ASAAADETLRLWRCF 394 (420)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE-------EEEETTTEEEEECCS
T ss_pred ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-------EEEecCCeEEEEECC
Confidence 689999999999998865 7899999999999887 456799999999999999987 456678888888765
Q ss_pred cc
Q psy14511 484 FG 485 (488)
Q Consensus 484 ~g 485 (488)
+.
T Consensus 395 ~~ 396 (420)
T 4gga_A 395 EL 396 (420)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=285.08 Aligned_cols=261 Identities=36% Similarity=0.658 Sum_probs=234.8
Q ss_pred cccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeE
Q psy14511 177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDL 256 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 256 (488)
+..+.+|..|.+++.+|++..+++.+.++|+++++++++.|++|++||+.+++....+...+ |...|++++|+|+++++
T Consensus 4 ~~~r~~p~~p~rvldap~~~~d~y~~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~-~~~~V~~v~~~~~~~~l 82 (318)
T 4ggc_A 4 KTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYL 82 (318)
T ss_dssp --CCCCCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEE
T ss_pred CCCcccCCCCCEEeeCCCCcccccceEEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecC-CCCeEEEEEECCCCCEE
Confidence 34567889999999999999999999999999999999999999999999999998888777 88899999999999999
Q ss_pred EEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccC
Q psy14511 257 AVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN 336 (488)
Q Consensus 257 ~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~ 336 (488)
+++ +.|+.|++||+++++.+..+.+|...+.++.+++..+++++.++.+++|+..........+.+|...+..+.++++
T Consensus 83 ~sg-s~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (318)
T 4ggc_A 83 AVG-TSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD 161 (318)
T ss_dssp EEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred EEE-ECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC
Confidence 999 9999999999999999999999999999999999999999999999999999877778888999999999999999
Q ss_pred CcEEEEEe-cCeEEEEECCCCCCCccccee--------------------------------------------------
Q psy14511 337 GRYLASGS-NNTVKIWDFRQLDAKRPLGLI-------------------------------------------------- 365 (488)
Q Consensus 337 ~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-------------------------------------------------- 365 (488)
+++|++++ |+.|++||+++++........
T Consensus 162 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~ 241 (318)
T 4ggc_A 162 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS 241 (318)
T ss_dssp SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee
Confidence 99999999 699999999875432110000
Q ss_pred ---eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511 366 ---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK 439 (488)
Q Consensus 366 ---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~ 439 (488)
...|+|+++.+++++|+.|+.|++||+++++++.++.+|.+.|++++|+||+++||||+.||+|+|||+.+.++
T Consensus 242 ~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 242 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCCC
T ss_pred eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCC
Confidence 11788899999887788999999999999999999999999999999999999999999999999999987543
No 56
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.5e-39 Score=285.39 Aligned_cols=264 Identities=16% Similarity=0.306 Sum_probs=216.5
Q ss_pred CCceEEEeecCCeEEEEEcccCcc----cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSD----YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC 78 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~----~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~ 78 (488)
++++|++|+.|++|++||+..... ....+.+|...|.+++|+|+|++|++++ |++|++||+.+++ .+..+.+
T Consensus 29 ~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~---~~~~~~~ 105 (319)
T 3frx_A 29 QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE---TYQRFVG 105 (319)
T ss_dssp CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEEC
T ss_pred CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC---eeEEEcc
Confidence 358999999999999999875432 2346789999999999999999999999 9999999998754 4455788
Q ss_pred cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV 158 (488)
Q Consensus 79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (488)
|...|.+++|+|++..+++++. |++|++||+.. +.+.
T Consensus 106 h~~~v~~~~~~~~~~~l~s~s~---D~~i~vwd~~~-~~~~--------------------------------------- 142 (319)
T 3frx_A 106 HKSDVMSVDIDKKASMIISGSR---DKTIKVWTIKG-QCLA--------------------------------------- 142 (319)
T ss_dssp CSSCEEEEEECTTSCEEEEEET---TSCEEEEETTS-CEEE---------------------------------------
T ss_pred CCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCC-CeEE---------------------------------------
Confidence 9999999999999988777776 99999999853 2111
Q ss_pred eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511 159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT 238 (488)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~ 238 (488)
.+.+
T Consensus 143 ----------------------------------------------------------------------------~~~~ 146 (319)
T 3frx_A 143 ----------------------------------------------------------------------------TLLG 146 (319)
T ss_dssp ----------------------------------------------------------------------------EECC
T ss_pred ----------------------------------------------------------------------------EEec
Confidence 1112
Q ss_pred CCCCceEEEEEcCC------CCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEE
Q psy14511 239 YDNAYISCVAWKPR------TTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYD 310 (488)
Q Consensus 239 ~~~~~i~~~~~~~~------~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d 310 (488)
|...+.+++++|. +..++++ +.|+.|++||+++.+....+.+|...|.+++| ++++|++++.||.|++||
T Consensus 147 -h~~~v~~~~~~~~~~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 147 -HNDWVSQVRVVPNEKADDDSVTIISA-GNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWN 224 (319)
T ss_dssp -CSSCEEEEEECCC------CCEEEEE-ETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred -cCCcEEEEEEccCCCCCCCccEEEEE-eCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 6777888888885 3477877 99999999999999999999999999999999 789999999999999999
Q ss_pred CcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccc-------------eeeeeecCCCCEEE
Q psy14511 311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLG-------------LIVPKLKREGRELV 377 (488)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~-------------~~~~~~~~~~~~l~ 377 (488)
+.+.+ ....+.. ...|.+++|+|++.+|+++.++.+++|++........+. ....+|+|+|++|+
T Consensus 225 ~~~~~-~~~~~~~-~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 302 (319)
T 3frx_A 225 LAAKK-AMYTLSA-QDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLF 302 (319)
T ss_dssp TTTTE-EEEEEEC-CSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEE
T ss_pred CCCCc-EEEEecC-CCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEE
Confidence 99853 4555554 457999999999999999998889999987653222111 11238999999999
Q ss_pred EEccCCCCeEEEEeCCCc
Q psy14511 378 TSHGKQDCSLKMWEYPRL 395 (488)
Q Consensus 378 ~~~g~~~~~i~i~d~~~~ 395 (488)
+ |+.|+.|++||+.++
T Consensus 303 s--g~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 303 A--GYTDNVIRVWQVMTA 318 (319)
T ss_dssp E--EETTSCEEEEEEEEC
T ss_pred E--eecCceEEEEEEeec
Confidence 9 889999999998653
No 57
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.1e-38 Score=313.01 Aligned_cols=310 Identities=18% Similarity=0.265 Sum_probs=233.9
Q ss_pred eeecccCceEEEEEEccCC-cEEEEec-CCeEEEEeccccCcC--CCcccccccccceeEEEEecCCCeEEeeeCCcccc
Q psy14511 30 TAITREGDVVCGLKWSPNG-RYLASGS-NNTVKIWDFRQLDAK--RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ 105 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~g-~~las~~-d~~i~vwd~~~~~~~--~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~ 105 (488)
..+.+|.+.|++++|+|++ ++|++|+ |++|++||+.+.... .....+.+|...|.+++|+|++++|++++. |+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~---Dg 452 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW---DG 452 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET---TS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC---CC
Confidence 4578999999999999864 7999998 999999999764322 123457789999999999999988877776 99
Q ss_pred eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511 106 TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK 185 (488)
Q Consensus 106 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (488)
+|++||+.++.....+..|...+..+.+++
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~-------------------------------------------------- 482 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSL-------------------------------------------------- 482 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECT--------------------------------------------------
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeC--------------------------------------------------
Confidence 999999999988887777654433333222
Q ss_pred CceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC--CeEEEEeCCC
Q psy14511 186 PERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT--TDLAVTNTCT 263 (488)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~~~ 263 (488)
++..+++++.|+.|++||...............|...|.+++|+|++ ..++++ +.|
T Consensus 483 ---------------------~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~-s~d 540 (694)
T 3dm0_A 483 ---------------------DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA-SWD 540 (694)
T ss_dssp ---------------------TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE-ETT
T ss_pred ---------------------CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE-eCC
Confidence 23578899999999999987655444333222288899999999987 467777 999
Q ss_pred CcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEE
Q psy14511 264 EYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA 341 (488)
Q Consensus 264 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 341 (488)
+.|++||+++++....+.+|...|.+++| ++++|++++.||.|++||+++++ .+..+. +...|.+++|+|++.+|+
T Consensus 541 ~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~-~~~~~~-~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK-KLYSLE-ANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE-EEECCB-CSSCEEEEEECSSSSEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-eEEEec-CCCcEEEEEEcCCCcEEE
Confidence 99999999999999999999999999999 68999999999999999999864 333343 446799999999999999
Q ss_pred EEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEE
Q psy14511 342 SGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVA 421 (488)
Q Consensus 342 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 421 (488)
+++++.|++||+++.+....+... ...... .. .. ........+...+++++|||||++|+
T Consensus 619 ~~~~~~i~iwd~~~~~~~~~~~~~-------~~~~~~----------~~--~~-~~~~~~~~~~~~~~~l~~spdg~~l~ 678 (694)
T 3dm0_A 619 AATEHGIKIWDLESKSIVEDLKVD-------LKAEAE----------KA--DN-SGPAATKRKVIYCTSLNWSADGSTLF 678 (694)
T ss_dssp EEETTEEEEEETTTTEEEEEECCC-------CC-----------------------------CCCCEEEEEECTTSSEEE
T ss_pred EEcCCCEEEEECCCCCChhhhccc-------cccccc----------cc--cc-cccccCCceeEEeeeEEEcCCCCEEE
Confidence 988888999999876322211110 000000 00 00 00001112333588999999999999
Q ss_pred EEeCCCcEEEEecCC
Q psy14511 422 AASADETISIWNCFP 436 (488)
Q Consensus 422 t~~~dg~v~iw~~~~ 436 (488)
+|+.||.|++|++..
T Consensus 679 sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 679 SGYTDGVIRVWGIGR 693 (694)
T ss_dssp EEETTSEEEEEEC--
T ss_pred EEcCCCeEEEEeccC
Confidence 999999999999853
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6e-39 Score=296.35 Aligned_cols=294 Identities=14% Similarity=0.201 Sum_probs=230.8
Q ss_pred ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc---CCCcccccccccceeEEEEecC----C---CeEEe
Q psy14511 29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA---KRPQVNNQCHLSAVKAIAWCPW----E---PTLLA 97 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~---~~~~~~~~~h~~~v~~l~~~~~----~---~~l~~ 97 (488)
...+.+|.+.|++++|+| ++|++++ |+.|++||+.+++. ...+..+.+|...|.+++|+|+ + ++|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 456789999999999999 7999988 99999999987541 1234556789999999999999 8 88877
Q ss_pred eeCCcccceEEEEecCCCee-----eeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeee
Q psy14511 98 TGGGICDQTVRLWNSMNGKE-----KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFL 172 (488)
Q Consensus 98 ~~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (488)
++. |+.|++|++.+++. ...+..+....
T Consensus 87 ~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 119 (397)
T 1sq9_A 87 TSF---SGDLLFYRITREDETKKVIFEKLDLLDSDM-------------------------------------------- 119 (397)
T ss_dssp EET---TSCEEEEEEEECTTTCCEEEEEECCSCTTG--------------------------------------------
T ss_pred EcC---CCCEEEEEccCCcccccccceeeccccccc--------------------------------------------
Confidence 776 99999999987764 33333331000
Q ss_pred cccccccccccCCCceeecCCCccccceeeeeeeC------CCc-EEEEECCCeEEEEECCC------CceEE-----EE
Q psy14511 173 RTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG------YHD-TLAVALDTSVYTWNTKT------NKTQL-----LV 234 (488)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~d~~v~iw~~~~------~~~~~-----~~ 234 (488)
....+.++.|+ ... +++++.|+.|++||+.+ ++... .+
T Consensus 120 ------------------------~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 175 (397)
T 1sq9_A 120 ------------------------KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 175 (397)
T ss_dssp ------------------------GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEE
T ss_pred ------------------------CCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCccee
Confidence 00112223333 345 77888999999999988 55443 33
Q ss_pred ec-----CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc---c---cccEEEEEe--cCCEEEEee
Q psy14511 235 EY-----PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT---H---MHQVIAMCW--NGNLLSCGT 301 (488)
Q Consensus 235 ~~-----~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~---~---~~~v~~~~~--~~~~l~~~~ 301 (488)
.. .. +...+.+++|+|++ .++++ +.++.|++||+++++.+..+.. | ...+.+++| ++++|++++
T Consensus 176 ~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 176 QGTVESPMT-PSQFATSVDISERG-LIATG-FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp EEEECCSSS-SCCCCCEEEECTTS-EEEEE-CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE
T ss_pred eeeeccccC-CCCCceEEEECCCc-eEEEE-eCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe
Confidence 22 23 78899999999999 88888 9999999999999999999988 8 999999999 689999999
Q ss_pred cC---CeEEEEECcCCCccceeeec-------------CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce
Q psy14511 302 IG---GNILHYDVRTHSDYPTAITR-------------EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL 364 (488)
Q Consensus 302 ~d---g~i~i~d~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~ 364 (488)
.| +.|++||+++. .....+.. |...|.+++|+|++++|++++ |+.|++||+++.
T Consensus 253 ~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-------- 323 (397)
T 1sq9_A 253 DSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-------- 323 (397)
T ss_dssp EETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------
T ss_pred cCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC--------
Confidence 99 99999999986 45666777 899999999999999999887 477777776543
Q ss_pred eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe------ec---------------cccEEEEEEcCCC------
Q psy14511 365 IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK------IH---------------QERILSAVLSPDQ------ 417 (488)
Q Consensus 365 ~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~------~~---------------~~~v~~~~~s~~~------ 417 (488)
+.+..+. +| ...|++++|+|++
T Consensus 324 -------------------------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~ 372 (397)
T 1sq9_A 324 -------------------------------ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 372 (397)
T ss_dssp -------------------------------EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred -------------------------------ceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence 3334444 44 8999999999998
Q ss_pred ----CEEEEEeCCCcEEEEecCCCC
Q psy14511 418 ----TCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 418 ----~~l~t~~~dg~v~iw~~~~~~ 438 (488)
++|++++.||.|++|++.+++
T Consensus 373 ~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 373 ADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998763
No 59
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-38 Score=279.71 Aligned_cols=296 Identities=15% Similarity=0.156 Sum_probs=229.3
Q ss_pred EcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeee
Q psy14511 21 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATG 99 (488)
Q Consensus 21 d~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~ 99 (488)
|..++..+...+.+|.+.|++++| |++++|++++ |+.|++||+.+++ ....+..|...|.+++|+|+++++++++
T Consensus 3 d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 3 DPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW---LGTVVYTGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp --CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE---EEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred CccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE---EEEEeecCCccEEEEEECCCCCEEEEec
Confidence 444554566778999999999999 9999999998 9999999997643 3444667899999999999999888877
Q ss_pred CCcccceEEEEecCCCe---eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccc
Q psy14511 100 GGICDQTVRLWNSMNGK---EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLG 176 (488)
Q Consensus 100 ~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
. |+.+++|++.... ....+..+
T Consensus 79 ~---dg~i~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 103 (313)
T 3odt_A 79 K---DTMINGVPLFATSGEDPLYTLIGH---------------------------------------------------- 103 (313)
T ss_dssp T---TSCEEEEETTCCTTSCC-CEECCC----------------------------------------------------
T ss_pred C---CCeEEEEEeeecCCCCcccchhhc----------------------------------------------------
Confidence 6 9999999987543 12222111
Q ss_pred cccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC-CCCe
Q psy14511 177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-RTTD 255 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 255 (488)
...+..+.++++.+++++.|+.|++|| .++....+.. |...+.+++|.| +++.
T Consensus 104 ---------------------~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~---~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 104 ---------------------QGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQA---HNASVWDAKVVSFSENK 157 (313)
T ss_dssp ---------------------SSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEEC---CSSCEEEEEEEETTTTE
T ss_pred ---------------------ccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEeccc---CCCceeEEEEccCCCCE
Confidence 112334555667888899999999999 4444444443 888999999988 8889
Q ss_pred EEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEE
Q psy14511 256 LAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333 (488)
Q Consensus 256 l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~ 333 (488)
++++ +.|+.|++|| ..+....+.. |...+.++++ .+..+++++.||.|++||++++ .....+..|...|.+++|
T Consensus 158 l~~~-~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 158 FLTA-SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG-DVLRTYEGHESFVYCIKL 233 (313)
T ss_dssp EEEE-ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEE
T ss_pred EEEE-ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch-hhhhhhhcCCceEEEEEE
Confidence 9888 9999999999 4456666666 8899999999 3334999999999999999986 467778889999999999
Q ss_pred ccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE
Q psy14511 334 SPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL 413 (488)
Q Consensus 334 s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 413 (488)
+|+++ |++++ .|+.|++||+.+++++..+..|...|.+++|
T Consensus 234 ~~~~~-l~~~~--------------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~ 274 (313)
T 3odt_A 234 LPNGD-IVSCG--------------------------------------EDRTVRIWSKENGSLKQVITLPAISIWSVDC 274 (313)
T ss_dssp CTTSC-EEEEE--------------------------------------TTSEEEEECTTTCCEEEEEECSSSCEEEEEE
T ss_pred ecCCC-EEEEe--------------------------------------cCCEEEEEECCCCceeEEEeccCceEEEEEE
Confidence 99995 55554 2444445555556677888889999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCccccccc
Q psy14511 414 SPDQTCVAAASADETISIWNCFPRDKKRKARQ 445 (488)
Q Consensus 414 s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~ 445 (488)
+|+++ +++++.||.|++|++.+++.......
T Consensus 275 ~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 275 MSNGD-IIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp CTTSC-EEEEETTSCEEEEESCGGGCCC----
T ss_pred ccCCC-EEEEeCCCcEEEEeCCCCceeehhhh
Confidence 99998 66799999999999998877654333
No 60
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.2e-39 Score=294.76 Aligned_cols=297 Identities=16% Similarity=0.241 Sum_probs=225.5
Q ss_pred eeecccCceEEEEEEccC---Cc--EEEEecCCeEEEEeccccCcCCCccccc--ccccceeEEEEecC----CCeEEee
Q psy14511 30 TAITREGDVVCGLKWSPN---GR--YLASGSNNTVKIWDFRQLDAKRPQVNNQ--CHLSAVKAIAWCPW----EPTLLAT 98 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~---g~--~las~~d~~i~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~----~~~l~~~ 98 (488)
....+|.++|++++|+|+ +. ++++++++.|++||+.+++....+.... .|...|.+++|+|+ +++++++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 445689999999999984 33 5555568899999998765443332221 26688999999999 5566666
Q ss_pred eCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511 99 GGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL 178 (488)
Q Consensus 99 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
+. |+.|++||+.+++.+..+..+...+..+.+.+.
T Consensus 92 ~~---dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~------------------------------------------ 126 (366)
T 3k26_A 92 GS---RGIIRIINPITMQCIKHYVGHGNAINELKFHPR------------------------------------------ 126 (366)
T ss_dssp ET---TCEEEEECTTTCCEEEEEESCCSCEEEEEECSS------------------------------------------
T ss_pred cC---CCEEEEEEchhceEeeeecCCCCcEEEEEECCC------------------------------------------
Confidence 65 999999999999887777655443332222220
Q ss_pred cccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEec-CCCCCCceEEEEEcCCCCeEE
Q psy14511 179 PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY-PTYDNAYISCVAWKPRTTDLA 257 (488)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~ 257 (488)
++..+++++.|+.|++||+.+++....+.. .+ |...|.+++|+|++++++
T Consensus 127 ----------------------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 127 ----------------------------DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp ----------------------------CTTEEEEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECTTSSEEE
T ss_pred ----------------------------CCCEEEEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECCCCCEEE
Confidence 124577788999999999999987776632 33 889999999999999999
Q ss_pred EEeCCCCcEEEEECCcceeeeeecc----------------------------ccccEEEEEecCCEEEEeecCCeEEEE
Q psy14511 258 VTNTCTEYIDLWHEQEERLIQKLRT----------------------------HMHQVIAMCWNGNLLSCGTIGGNILHY 309 (488)
Q Consensus 258 ~~~~~~~~i~i~d~~~~~~~~~~~~----------------------------~~~~v~~~~~~~~~l~~~~~dg~i~i~ 309 (488)
++ +.|+.|++||+++++....+.. |...|.+++|+++++++++.|+.|++|
T Consensus 178 ~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~w 256 (366)
T 3k26_A 178 SC-GMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCW 256 (366)
T ss_dssp EE-ETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEE
T ss_pred Ee-cCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEE
Confidence 99 8999999999998765544443 899999999999999999999999999
Q ss_pred ECcCCCc-------------cceeeecCCccEEEEEEccC--CcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCC
Q psy14511 310 DVRTHSD-------------YPTAITREGDVVCGLKWSPN--GRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREG 373 (488)
Q Consensus 310 d~~~~~~-------------~~~~~~~~~~~i~~~~~s~~--~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 373 (488)
|+.+... ....+..|...|.+++|+|+ +++|++++ |+.|++||+.+.+..
T Consensus 257 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~-------------- 322 (366)
T 3k26_A 257 KPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH-------------- 322 (366)
T ss_dssp EESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG--------------
T ss_pred eCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc--------------
Confidence 9987543 24455667777777888887 77887776 466777766543110
Q ss_pred CEEEEEccCCCCeEEEEeCCCcceeEEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511 374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIH--QERILSAVLSPDQTCVAAASADETISIWNCFP 436 (488)
Q Consensus 374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~ 436 (488)
......+.+| ...|++++|+|++++|++++.||.|++||+.+
T Consensus 323 ---------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 323 ---------------------KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ---------------------GCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ---------------------cccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 1133466667 78999999999999999999999999999853
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-38 Score=292.04 Aligned_cols=278 Identities=22% Similarity=0.394 Sum_probs=219.5
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+|+++.+++++.||.|++||+.+++........|...|.+++|+|++++|++|+ |+.|++||+.+++ .+..+.+|.
T Consensus 100 ~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~ 176 (401)
T 4aez_A 100 DWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT---KLRTMAGHQ 176 (401)
T ss_dssp EECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEEECCCS
T ss_pred eecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe---EEEEecCCC
Confidence 567788888999999999999998865444445899999999999999999998 9999999998744 445567899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
..|.+++|+ ++.+++++. |+.|++||+......
T Consensus 177 ~~v~~~~~~--~~~l~~~~~---dg~i~i~d~~~~~~~------------------------------------------ 209 (401)
T 4aez_A 177 ARVGCLSWN--RHVLSSGSR---SGAIHHHDVRIANHQ------------------------------------------ 209 (401)
T ss_dssp SCEEEEEEE--TTEEEEEET---TSEEEEEETTSSSCE------------------------------------------
T ss_pred CceEEEEEC--CCEEEEEcC---CCCEEEEecccCcce------------------------------------------
Confidence 999999995 456666665 999999998743210
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~ 240 (488)
... +.+ |
T Consensus 210 ----------------------------------------------------------------------~~~--~~~-~ 216 (401)
T 4aez_A 210 ----------------------------------------------------------------------IGT--LQG-H 216 (401)
T ss_dssp ----------------------------------------------------------------------EEE--EEC-C
T ss_pred ----------------------------------------------------------------------eeE--EcC-C
Confidence 011 112 7
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec---CCEEEEee--cCCeEEEEECcCCC
Q psy14511 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN---GNLLSCGT--IGGNILHYDVRTHS 315 (488)
Q Consensus 241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~--~dg~i~i~d~~~~~ 315 (488)
...|.+++|+|++++++++ +.|+.|++||+++++.+..+..|...+.+++|. ..++++++ .|+.|++||+.++.
T Consensus 217 ~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASG-GNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCeeEEEEcCCCCEEEEE-eCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 7899999999999999999 999999999999999999999999999999993 36677765 79999999999864
Q ss_pred ccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCc
Q psy14511 316 DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRL 395 (488)
Q Consensus 316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~ 395 (488)
....+. +...|.+++|+|+++++++++ |..|+.|++||+.++
T Consensus 296 -~~~~~~-~~~~v~~~~~s~~~~~l~~~~------------------------------------g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 296 -RVNTVD-AGSQVTSLIWSPHSKEIMSTH------------------------------------GFPDNNLSIWSYSSS 337 (401)
T ss_dssp -EEEEEE-CSSCEEEEEECSSSSEEEEEE------------------------------------CTTTCEEEEEEEETT
T ss_pred -EEEEEe-CCCcEEEEEECCCCCeEEEEe------------------------------------ecCCCcEEEEecCCc
Confidence 444443 566799999999999998853 233444444444443
Q ss_pred c--eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511 396 H--LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR 441 (488)
Q Consensus 396 ~--~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~ 441 (488)
+ ....+.+|...|.+++|+|++++|++++.||.|++|++.+++...
T Consensus 338 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 338 GLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred cceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 2 334567899999999999999999999999999999999988664
No 62
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.1e-38 Score=289.23 Aligned_cols=270 Identities=18% Similarity=0.335 Sum_probs=217.1
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccC------------------ceEEEEEEccCCcEEEEec-CCeEEEE
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG------------------DVVCGLKWSPNGRYLASGS-NNTVKIW 62 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~------------------~~V~~l~~sp~g~~las~~-d~~i~vw 62 (488)
+.||++||+|+ ++.++||++.+++.+ ..+..|. ..|.+++|+|+|++||+|+ |+.|+||
T Consensus 73 spdg~~la~g~-~~~v~i~~~~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iw 150 (393)
T 1erj_A 73 SNDGEYLATGC-NKTTQVYRVSDGSLV-ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIW 150 (393)
T ss_dssp CTTSSEEEEEC-BSCEEEEETTTCCEE-EEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEc-CCcEEEEEecCCCEE-EEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 45999999987 789999999988744 3344332 2499999999999999998 9999999
Q ss_pred eccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511 63 DFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR 142 (488)
Q Consensus 63 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (488)
|+.+++ .+..+.+|...|.+++|+|++++|++++. |++|++||+.+++....+.....
T Consensus 151 d~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~~~~~~~~~---------------- 208 (393)
T 1erj_A 151 DIENRK---IVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCSLTLSIEDG---------------- 208 (393)
T ss_dssp ETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEECSSC----------------
T ss_pred ECCCCc---EEEEEccCCCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCeeEEEEEcCCC----------------
Confidence 998743 44557889999999999999998887776 99999999999886655432210
Q ss_pred eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC---CCcEEEEECCCe
Q psy14511 143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG---YHDTLAVALDTS 219 (488)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~ 219 (488)
+..+.++ +..+++++.|+.
T Consensus 209 ----------------------------------------------------------v~~~~~~~~~~~~l~~~s~d~~ 230 (393)
T 1erj_A 209 ----------------------------------------------------------VTTVAVSPGDGKYIAAGSLDRA 230 (393)
T ss_dssp ----------------------------------------------------------EEEEEECSTTCCEEEEEETTSC
T ss_pred ----------------------------------------------------------cEEEEEECCCCCEEEEEcCCCc
Confidence 1112222 245777889999
Q ss_pred EEEEECCCCceEEEEec-----CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc------------eeeeeecc
Q psy14511 220 VYTWNTKTNKTQLLVEY-----PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE------------RLIQKLRT 282 (488)
Q Consensus 220 v~iw~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~------------~~~~~~~~ 282 (488)
|++||+.++.....+.. .+ |...|.+++|+|++++|+++ +.|+.|++||++.. .+...+.+
T Consensus 231 v~iwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~~~g~~l~s~-s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
T 1erj_A 231 VRVWDSETGFLVERLDSENESGTG-HKDSVYSVVFTRDGQSVVSG-SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 308 (393)
T ss_dssp EEEEETTTCCEEEEEC------CC-CSSCEEEEEECTTSSEEEEE-ETTSEEEEEEC---------------CEEEEEEC
T ss_pred EEEEECCCCcEEEeecccccCCCC-CCCCEEEEEECCCCCEEEEE-eCCCEEEEEECCCCCCcccccCCCCCcceEEEec
Confidence 99999999887665532 23 88899999999999999999 99999999998753 34556778
Q ss_pred ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEcc------CCcEEEEEe-cCeEEEEEC
Q psy14511 283 HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP------NGRYLASGS-NNTVKIWDF 353 (488)
Q Consensus 283 ~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~------~~~~l~~~~-d~~i~iwd~ 353 (488)
|...|.++++ ++++|++|+.|+.|++||++++ .....+.+|...|.+++|+| ++++|++++ |+.|++|++
T Consensus 309 h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 309 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC-eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 9999999999 6899999999999999999986 46778889999999999986 688999998 699999998
Q ss_pred CCC
Q psy14511 354 RQL 356 (488)
Q Consensus 354 ~~~ 356 (488)
...
T Consensus 388 ~~~ 390 (393)
T 1erj_A 388 KKI 390 (393)
T ss_dssp EEC
T ss_pred ccc
Confidence 643
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.7e-39 Score=294.41 Aligned_cols=321 Identities=11% Similarity=0.150 Sum_probs=240.3
Q ss_pred eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511 31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL 109 (488)
Q Consensus 31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v 109 (488)
.+..|.++|++++|+|++++|++++ |+.|++||+.+++ ...+..+.+|...|.+++|+|+++++++++. |+.|++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~v 78 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYV 78 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-EEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-EEeeeeecCCCCcccEEEEeCCCCEEEEEcC---CCeEEE
Confidence 3556999999999999999999997 9999999998743 1245557789999999999999998887776 999999
Q ss_pred EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511 110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI 189 (488)
Q Consensus 110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (488)
||+.+++..........
T Consensus 79 wd~~~~~~~~~~~~~~~--------------------------------------------------------------- 95 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRI--------------------------------------------------------------- 95 (372)
T ss_dssp EEEETTEEEEEEECCCC---------------------------------------------------------------
T ss_pred EECCCCeeeeeEEeecC---------------------------------------------------------------
Confidence 99988765443322110
Q ss_pred ecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEE-EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcE
Q psy14511 190 LEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI 266 (488)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i 266 (488)
...+..+.|+ +..+++++.|+.|++||+..+..... ......|...|.+++|+|++++++++ +.|+.|
T Consensus 96 --------~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i 166 (372)
T 1k8k_C 96 --------NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG-SCDFKC 166 (372)
T ss_dssp --------SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE-ETTSCE
T ss_pred --------CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE-cCCCCE
Confidence 0112223333 34677788999999999998763221 12222278899999999999999999 899999
Q ss_pred EEEEC------------------CcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCc
Q psy14511 267 DLWHE------------------QEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD 326 (488)
Q Consensus 267 ~i~d~------------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 326 (488)
++||+ ..++.+..+..|...+.+++| ++++|++++.|+.|++||++++ .....+..|..
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~ 245 (372)
T 1k8k_C 167 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK-MAVATLASETL 245 (372)
T ss_dssp EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT-TEEEEEECSSC
T ss_pred EEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceeEEEccCCC
Confidence 99995 367788888899999999999 6889999999999999999986 46777888999
Q ss_pred cEEEEEEccCCcEEEEEecCeEEEEECCC--CC--CCcccceeeeeecCCCCEEEEEccCCCCeEEEE---eCCCccee-
Q psy14511 327 VVCGLKWSPNGRYLASGSNNTVKIWDFRQ--LD--AKRPLGLIVPKLKREGRELVTSHGKQDCSLKMW---EYPRLHLI- 398 (488)
Q Consensus 327 ~i~~~~~s~~~~~l~~~~d~~i~iwd~~~--~~--~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~---d~~~~~~~- 398 (488)
+|.+++|+|++++|+++.|+.|++|++.+ +. ....+.. ... .. ......+++| +.. ++..
T Consensus 246 ~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~-------~~~--~~--~~~~~~~~~~~~~~~~-~~~~~ 313 (372)
T 1k8k_C 246 PLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDV-------PKQ--SS--QRGLTARERFQNLDKK-ASSEG 313 (372)
T ss_dssp CEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCC-------C------------CHHHHHHHCCCC-C----
T ss_pred CeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCc-------ccc--ch--hhhcchhhhhhhcccc-ccccc
Confidence 99999999999999999889999999986 31 0000000 000 00 1112224444 322 2221
Q ss_pred -----EEE-eeccccEEEEEEc-CCC---CEEEEEeCCCcEEEEecCCCCcc
Q psy14511 399 -----EEL-KIHQERILSAVLS-PDQ---TCVAAASADETISIWNCFPRDKK 440 (488)
Q Consensus 399 -----~~~-~~~~~~v~~~~~s-~~~---~~l~t~~~dg~v~iw~~~~~~~~ 440 (488)
..+ .+|..+|++++|+ ++| ++|++++.||.|++|++.+++..
T Consensus 314 ~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 314 SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp -----CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred CccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 233 4899999999966 666 99999999999999999876543
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.3e-39 Score=298.47 Aligned_cols=312 Identities=11% Similarity=0.105 Sum_probs=243.0
Q ss_pred eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe
Q psy14511 38 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK 116 (488)
Q Consensus 38 ~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~ 116 (488)
.+++++|+|+|++|++++ |+.|++||+.+++... .+..| ..+....|+|+++++++++. |+.|++||+.+++
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~---~~~~~-~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~ 130 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSK---MLKRA-DYTAVDTAKLQMRRFILGTT---EGDIKVLDSNFNL 130 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTT---TSCSC-CEEEEEEECSSSCEEEEEET---TSCEEEECTTSCE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceee---EEecC-CceEEEEEecCCCEEEEEEC---CCCEEEEeCCCcc
Confidence 345799999999999998 9999999998755433 23445 44555678999988777766 9999999987655
Q ss_pred eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcc
Q psy14511 117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSII 196 (488)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (488)
....
T Consensus 131 ~~~~---------------------------------------------------------------------------- 134 (420)
T 3vl1_A 131 QREI---------------------------------------------------------------------------- 134 (420)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred eeee----------------------------------------------------------------------------
Confidence 3211
Q ss_pred ccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee
Q psy14511 197 NDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL 276 (488)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~ 276 (488)
+.+ |...|++++|+|++++|+++ +.|+.|++||+.+++.
T Consensus 135 ---------------------------------------~~~-h~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 135 ---------------------------------------DQA-HVSEITKLKFFPSGEALISS-SQDMQLKIWSVKDGSN 173 (420)
T ss_dssp ---------------------------------------TTS-SSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCC
T ss_pred ---------------------------------------ccc-ccCccEEEEECCCCCEEEEE-eCCCeEEEEeCCCCcC
Confidence 112 78899999999999999999 9999999999999999
Q ss_pred eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec---CCccEEE---------------------
Q psy14511 277 IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR---EGDVVCG--------------------- 330 (488)
Q Consensus 277 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~i~~--------------------- 330 (488)
+..+.+|...|.+++| +++.|++++.|+.|++||+++++ ....+.. +...+.+
T Consensus 174 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~ 252 (420)
T 3vl1_A 174 PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT-TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNN 252 (420)
T ss_dssp CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCT
T ss_pred ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc-eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccc
Confidence 9999999999999999 68999999999999999998764 4444443 3344444
Q ss_pred EEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------eeeeecCCCC-EEEEEccCCCCeEEEEeCCCcc-eeEEE
Q psy14511 331 LKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------IVPKLKREGR-ELVTSHGKQDCSLKMWEYPRLH-LIEEL 401 (488)
Q Consensus 331 ~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------~~~~~~~~~~-~l~~~~g~~~~~i~i~d~~~~~-~~~~~ 401 (488)
++|+|++++|++++ |+.|++||+++.+....+.. ...+|+|+++ ++++ |+.||.|++||+.+++ ++..+
T Consensus 253 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--g~~dg~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 253 LEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYA--GYENGMLAQWDLRSPECPVGEF 330 (420)
T ss_dssp TCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEE--EETTSEEEEEETTCTTSCSEEE
T ss_pred eEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEE--EeCCCeEEEEEcCCCcCchhhh
Confidence 45578999999999 69999999988754333321 1229999999 8888 7899999999999875 47777
Q ss_pred ee-ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc----------cccccccCCcceEEeecCCC---ceEEEEee
Q psy14511 402 KI-HQERILSAVLSPDQTCVAAASADETISIWNCFPRDK----------KRKARQVGSGSSLEFAILKQ---PVSLTALL 467 (488)
Q Consensus 402 ~~-~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~----------~~~~~~~~~v~~~~~s~~~~---~~~~~~~~ 467 (488)
.+ |...|.++.+ |++++|++++.||.|++|++..++. .....+.+.+.+++|+|+++ .+...+
T Consensus 331 ~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g-- 407 (420)
T 3vl1_A 331 LINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG-- 407 (420)
T ss_dssp EESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE--
T ss_pred hccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc--
Confidence 77 5667888855 6889999999999999999987422 23456788899999999998 443322
Q ss_pred ecccccceeeEEEEeec
Q psy14511 468 RSRAVEKQQHAIAYTVF 484 (488)
Q Consensus 468 ~~~~~~~~~~~i~~~~~ 484 (488)
.+....++..++
T Consensus 408 -----~~g~~~~~~~~~ 419 (420)
T 3vl1_A 408 -----KNNFCALYNLSN 419 (420)
T ss_dssp -----TTTEEEEEESCC
T ss_pred -----CCceEEEEeccC
Confidence 334556665543
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-37 Score=288.53 Aligned_cols=284 Identities=24% Similarity=0.452 Sum_probs=229.5
Q ss_pred eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee
Q psy14511 38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE 117 (488)
Q Consensus 38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 117 (488)
.++.|+||++ ++||+|.|++|+|||..+++... +..+.+|...|++|+|+|+|++|++++. |++|++||+.+++.
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~-~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQ-LLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKR 181 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEE-EEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEE
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEE-EEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEEcCCCcE
Confidence 4567999975 58888889999999999876443 3345678889999999999998777776 99999999999998
Q ss_pred eeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccc
Q psy14511 118 KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIN 197 (488)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (488)
+..+..+...
T Consensus 182 ~~~~~~h~~~---------------------------------------------------------------------- 191 (420)
T 4gga_A 182 LRNMTSHSAR---------------------------------------------------------------------- 191 (420)
T ss_dssp EEEECCCSSC----------------------------------------------------------------------
T ss_pred EEEEeCCCCc----------------------------------------------------------------------
Confidence 8777665321
Q ss_pred cceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce--
Q psy14511 198 DFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-- 275 (488)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-- 275 (488)
+.++.+++..+++++.|+.+++||........ ..+.+ |...+..+.++|++++++++ +.|+.+++|+...++
T Consensus 192 ---v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~-~~~~~-h~~~~~~~~~~~~g~~l~s~-~~D~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 192 ---VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHV-ATLSG-HSQEVCGLRWAPDGRHLASG-GNDNLVNVWPSAPGEGG 265 (420)
T ss_dssp ---EEEEEEETTEEEEEETTSEEEEEETTSSSCEE-EEEEC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEESSCCSSC
T ss_pred ---eEEEeeCCCEEEEEeCCCceeEeeecccceee-EEecc-cccceeeeeecCCCCeeeee-eccccceEEeecccccc
Confidence 22344555678888899999999988755332 22333 88999999999999999999 999999999998754
Q ss_pred --eeeeeccccccEEEEEe---cCCEEEE--eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeE
Q psy14511 276 --LIQKLRTHMHQVIAMCW---NGNLLSC--GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTV 348 (488)
Q Consensus 276 --~~~~~~~~~~~v~~~~~---~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i 348 (488)
.+.....|...|.+++| ++..+++ |+.|+.|++||+.++. ....+..+ ..+.++.|+|+++.+++++
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~-~~~~~~~~-~~v~~~~~~~~~~~lv~~s---- 339 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAH-SQVCSILWSPHYKELISGH---- 339 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE-EEEEEECS-SCEEEEEEETTTTEEEEEE----
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc-cceeeccc-cceeeeeecCCCCeEEEEE----
Confidence 34566778999999999 3566665 4579999999999864 44445444 4588888998888877664
Q ss_pred EEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc
Q psy14511 349 KIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET 428 (488)
Q Consensus 349 ~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~ 428 (488)
|..|+.|++||+.+++++.++.+|.+.|++++|+|||++||||+.|++
T Consensus 340 --------------------------------g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 340 --------------------------------GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp --------------------------------CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred --------------------------------ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 567888888888889999999999999999999999999999999999
Q ss_pred EEEEecCCCCcc
Q psy14511 429 ISIWNCFPRDKK 440 (488)
Q Consensus 429 v~iw~~~~~~~~ 440 (488)
|++||+.+..+.
T Consensus 388 vriWdv~~~~~~ 399 (420)
T 4gga_A 388 LRLWRCFELDPA 399 (420)
T ss_dssp EEEECCSCSSCC
T ss_pred EEEEECCCCCcc
Confidence 999999876655
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.8e-39 Score=296.33 Aligned_cols=315 Identities=12% Similarity=0.142 Sum_probs=219.6
Q ss_pred cCCceEEEeecCCeEEEEEcccCc-ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
.||++||+|+.||.|+|||+.++. .....+.+|...|.+++|+|++++|++++ |+.|++||+.+++.......+.+|.
T Consensus 21 ~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~ 100 (377)
T 3dwl_C 21 SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN 100 (377)
T ss_dssp SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS
T ss_pred CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC
Confidence 489999999999999999999873 34567889999999999999999999998 9999999998865344555677899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
..|.+++|+|+++++++++. |+.|++||+.+++....
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~---------------------------------------- 137 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSG---ARVISVCYFEQENDWWV---------------------------------------- 137 (377)
T ss_dssp SCEEEEECCTTSSCCEEEES---SSCEEECCC-----CCC----------------------------------------
T ss_pred CceEEEEECCCCCEEEEEec---CCeEEEEEECCccccee----------------------------------------
Confidence 99999999999998887776 99999999976642100
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~ 240 (488)
...+. ..|
T Consensus 138 ----------------------------------------------------------------------~~~~~--~~h 145 (377)
T 3dwl_C 138 ----------------------------------------------------------------------SKHLK--RPL 145 (377)
T ss_dssp ----------------------------------------------------------------------CEEEC--SSC
T ss_pred ----------------------------------------------------------------------eeEee--ccc
Confidence 00011 116
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCCcEEEEECC------------------cceeeeeeccccccEEEEEe--cCCEEEEe
Q psy14511 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ------------------EERLIQKLRTHMHQVIAMCW--NGNLLSCG 300 (488)
Q Consensus 241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~ 300 (488)
...|.+++|+|++++++++ +.|+.|++||+. .++++..+ .|...|.+++| ++++|+++
T Consensus 146 ~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~ 223 (377)
T 3dwl_C 146 RSTILSLDWHPNNVLLAAG-CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYA 223 (377)
T ss_dssp CSCEEEEEECTTSSEEEEE-ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEE
T ss_pred CCCeEEEEEcCCCCEEEEE-eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEE
Confidence 7789999999999999999 999999999984 45666777 89999999999 78999999
Q ss_pred ecCCeEEEEECcCCCcc---ceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCC--Ccccceeee--eec--C
Q psy14511 301 TIGGNILHYDVRTHSDY---PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDA--KRPLGLIVP--KLK--R 371 (488)
Q Consensus 301 ~~dg~i~i~d~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~--~~~~~~~~~--~~~--~ 371 (488)
+.||.|++||++++... ...+..|..+|.+++|+|++++|++++++.+.+|+...... ...+..... ... +
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTG 303 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSS
T ss_pred eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeeccccccccccccc
Confidence 99999999999986531 67788999999999999999999999986666888763321 111110000 000 0
Q ss_pred C---CC--EEEEEccCCCCeEEEEeCCC--cceeEEEeeccccEEEEEEcCCC-C---EEEEEeCCCcEEEEec
Q psy14511 372 E---GR--ELVTSHGKQDCSLKMWEYPR--LHLIEELKIHQERILSAVLSPDQ-T---CVAAASADETISIWNC 434 (488)
Q Consensus 372 ~---~~--~l~~~~g~~~~~i~i~d~~~--~~~~~~~~~~~~~v~~~~~s~~~-~---~l~t~~~dg~v~iw~~ 434 (488)
. +. .-+..........+..+... .........|.+.|+++++.+.. . .|+|++.||.|++||+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 304 NTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 00 00000000001111111110 01112234599999999976644 3 6999999999999985
No 67
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-37 Score=280.28 Aligned_cols=278 Identities=16% Similarity=0.259 Sum_probs=204.4
Q ss_pred CCceEEEeecCCeEEEEEcccCcc------cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSD------YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNN 76 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~------~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~ 76 (488)
|+++||+|+.|++|+|||+...+. ....+.+|...|.+++|+|++++|++++ |++|++||+.+++ .+..+
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~---~~~~~ 114 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT---TYKRF 114 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC---EEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---EEEEE
Confidence 889999999999999999976431 2346789999999999999999999998 9999999998754 44567
Q ss_pred cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeee---cCCCccccccccccccccceeEEEEEeeeec
Q psy14511 77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVK---TDSQQANDETISYREQKKRRHLSFLLHGFEI 153 (488)
Q Consensus 77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (488)
.+|...|.+++|+|+++++++++. |++|++||+.... ..... .+...+..+.+.+....
T Consensus 115 ~~h~~~v~~v~~sp~~~~l~s~~~---d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-------------- 176 (343)
T 2xzm_R 115 VGHQSEVYSVAFSPDNRQILSAGA---EREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKS-------------- 176 (343)
T ss_dssp ECCCSCEEEEEECSSTTEEEEEET---TSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCS--------------
T ss_pred cCCCCcEEEEEECCCCCEEEEEcC---CCEEEEEeccCCc-eeeeecccCCCceeeeeeecccccc--------------
Confidence 889999999999999998888776 9999999987432 22111 11111111111110000
Q ss_pred cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~ 233 (488)
...+......+++++.|+.|++||.. .+....
T Consensus 177 -----------------------------------------------~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~ 208 (343)
T 2xzm_R 177 -----------------------------------------------ANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYT 208 (343)
T ss_dssp -----------------------------------------------CSCCCSSCCEEEEEETTSEEEEEETT-TEEEEE
T ss_pred -----------------------------------------------ccccCCCCCEEEEEcCCCEEEEEcCC-CceeEE
Confidence 00000112457888899999999943 333333
Q ss_pred EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEE
Q psy14511 234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYD 310 (488)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d 310 (488)
+ .+ |...|.+++|+|++++|+++ +.|+.|++||+... .....+ .+...|.+++| ++.+++ ++.|+.+++||
T Consensus 209 ~--~~-h~~~v~~~~~s~~g~~l~sg-s~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~ 282 (343)
T 2xzm_R 209 F--KA-HESNVNHLSISPNGKYIATG-GKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVA-VGTDQGVKIFN 282 (343)
T ss_dssp E--EC-CSSCEEEEEECTTSSEEEEE-ETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEE-EEESSCEEEEE
T ss_pred E--cC-ccccceEEEECCCCCEEEEE-cCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEE-EECCCCEEEEE
Confidence 3 33 88999999999999999999 99999999999543 333333 34567999999 456555 55688899999
Q ss_pred CcCCCccc-eee-----------ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511 311 VRTHSDYP-TAI-----------TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL 356 (488)
Q Consensus 311 ~~~~~~~~-~~~-----------~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~ 356 (488)
+.+..... ..+ .+|...|.+++|+|+|++|++++ ||.|++|+++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 283 LMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred eCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 98754221 122 26778899999999999999999 699999998654
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=287.71 Aligned_cols=288 Identities=15% Similarity=0.254 Sum_probs=227.1
Q ss_pred cccceeecccCceEEEEEEccCCcEE-EEec----CCeEEEEeccccCcCCCcccccccccceeEEEEecC---CCeEEe
Q psy14511 26 SDYPTAITREGDVVCGLKWSPNGRYL-ASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW---EPTLLA 97 (488)
Q Consensus 26 ~~~~~~~~~h~~~V~~l~~sp~g~~l-as~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~l~~ 97 (488)
+.+...+.+|...|.+++|+|+++.| ++++ |+.|++||+.+++... ....+|...|.+++|+|+ ++++++
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL--LREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE--EEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc--eeeecccCcEEEEEEcCCCCCCceEEE
Confidence 33445667899999999999999655 5553 7999999998754322 113368999999999998 577777
Q ss_pred eeCCcccceEEEEecCCCe-eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccc
Q psy14511 98 TGGGICDQTVRLWNSMNGK-EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLG 176 (488)
Q Consensus 98 ~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
++. |+.|++||+.+++ ....+
T Consensus 86 ~~~---dg~i~iwd~~~~~~~~~~~------------------------------------------------------- 107 (357)
T 3i2n_A 86 GDF---GGNLHIWNLEAPEMPVYSV------------------------------------------------------- 107 (357)
T ss_dssp EET---TSCEEEECTTSCSSCSEEE-------------------------------------------------------
T ss_pred ecC---CCeEEEEeCCCCCccEEEE-------------------------------------------------------
Confidence 666 9999999997664 21111
Q ss_pred cccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEE------Ec
Q psy14511 177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA------WK 250 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~------~~ 250 (488)
.+ |...|.+++ |+
T Consensus 108 ------------------------------------------------------------~~-~~~~v~~~~~~~~~~~s 126 (357)
T 3i2n_A 108 ------------------------------------------------------------KG-HKEIINAIDGIGGLGIG 126 (357)
T ss_dssp ------------------------------------------------------------CC-CSSCEEEEEEESGGGCC
T ss_pred ------------------------------------------------------------Ee-cccceEEEeeccccccC
Confidence 11 677788884 57
Q ss_pred CCCCeEEEEeCCCCcEEEEECCcce-eeeeeccccc----cEEEEE----e--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511 251 PRTTDLAVTNTCTEYIDLWHEQEER-LIQKLRTHMH----QVIAMC----W--NGNLLSCGTIGGNILHYDVRTHSDYPT 319 (488)
Q Consensus 251 ~~~~~l~~~~~~~~~i~i~d~~~~~-~~~~~~~~~~----~v~~~~----~--~~~~l~~~~~dg~i~i~d~~~~~~~~~ 319 (488)
|+++.++++ +.|+.|++||+++++ .+..+..|.. .+.++. | +++++++++.||.|++||+++.. ..
T Consensus 127 ~~~~~l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~ 203 (357)
T 3i2n_A 127 EGAPEIVTG-SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA--LR 203 (357)
T ss_dssp -CCCEEEEE-ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE--EE
T ss_pred CCccEEEEE-eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc--ee
Confidence 899999999 999999999999876 6677765544 788888 3 78999999999999999999864 24
Q ss_pred eeecCCccEEEEEEcc---CCcEEEEEe-cCeEEEEECCCCCCCcccc-----ee-----eeeecCCCC-EEEEEccCCC
Q psy14511 320 AITREGDVVCGLKWSP---NGRYLASGS-NNTVKIWDFRQLDAKRPLG-----LI-----VPKLKREGR-ELVTSHGKQD 384 (488)
Q Consensus 320 ~~~~~~~~i~~~~~s~---~~~~l~~~~-d~~i~iwd~~~~~~~~~~~-----~~-----~~~~~~~~~-~l~~~~g~~~ 384 (488)
....|...|.+++|+| ++.+|++++ |+.|++||+++.+....+. .. ..+|+|+++ ++++ ++.|
T Consensus 204 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~d 281 (357)
T 3i2n_A 204 WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLT--AGGA 281 (357)
T ss_dssp EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEE--EETT
T ss_pred eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEE--EeCC
Confidence 5577888999999999 999999999 6999999998775544332 11 128999999 6777 7889
Q ss_pred CeEEEEeCCCc-------------------ceeEEEeeccccEEEEEEcCCCCEEE-EEeCCCcEEEEecCCCCc
Q psy14511 385 CSLKMWEYPRL-------------------HLIEELKIHQERILSAVLSPDQTCVA-AASADETISIWNCFPRDK 439 (488)
Q Consensus 385 ~~i~i~d~~~~-------------------~~~~~~~~~~~~v~~~~~s~~~~~l~-t~~~dg~v~iw~~~~~~~ 439 (488)
+.|++||+.++ +.+..+.+|...|++++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 99999999753 46778889999999999999999998 899999999999987653
No 69
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.1e-37 Score=291.95 Aligned_cols=296 Identities=17% Similarity=0.278 Sum_probs=236.6
Q ss_pred ceeecccCceE-EEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511 29 PTAITREGDVV-CGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT 106 (488)
Q Consensus 29 ~~~~~~h~~~V-~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~ 106 (488)
...+.+|...| .++.+ ++++|++|+ |+.|++||+.+++ .+..+.+|.+.|.+++|+|++ .+++++. |++
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~---~~~~~~~h~~~V~~l~~~~~~-~l~s~s~---dg~ 184 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK---FLLQLSGHDGGVWALKYAHGG-ILVSGST---DRT 184 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECSTT-EEEEEET---TSC
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCc---EEEEEeCCCcCEEEEEEcCCC-EEEEEeC---CCC
Confidence 35678898875 65555 578999998 9999999998754 455577899999999999988 6666665 999
Q ss_pred EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511 107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP 186 (488)
Q Consensus 107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
|++||+.+++....+..
T Consensus 185 i~vwd~~~~~~~~~~~~--------------------------------------------------------------- 201 (464)
T 3v7d_B 185 VRVWDIKKGCCTHVFEG--------------------------------------------------------------- 201 (464)
T ss_dssp EEEEETTTTEEEEEECC---------------------------------------------------------------
T ss_pred EEEEECCCCcEEEEECC---------------------------------------------------------------
Confidence 99999988775443332
Q ss_pred ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc--CCCCeEEEEeCCCC
Q psy14511 187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK--PRTTDLAVTNTCTE 264 (488)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~~~~ 264 (488)
|...|.+++|+ +++++++++ +.|+
T Consensus 202 -----------------------------------------------------h~~~v~~l~~~~~~~~~~l~s~-s~d~ 227 (464)
T 3v7d_B 202 -----------------------------------------------------HNSTVRCLDIVEYKNIKYIVTG-SRDN 227 (464)
T ss_dssp -----------------------------------------------------CSSCEEEEEEEESSSCEEEEEE-ETTS
T ss_pred -----------------------------------------------------CCCccEEEEEecCCCCCEEEEE-cCCC
Confidence 55566666665 355556666 6666
Q ss_pred cEEEEECCcce-----------------------eeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceee
Q psy14511 265 YIDLWHEQEER-----------------------LIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAI 321 (488)
Q Consensus 265 ~i~i~d~~~~~-----------------------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 321 (488)
.|++||+.++. .+..+.+|...+.++..+++.+++++.||.|++||+++. .....+
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~-~~~~~~ 306 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM-KCLYIL 306 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT-EEEEEE
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEe
Confidence 77777665543 245677899999999999999999999999999999875 567778
Q ss_pred ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee---eeeecCCCCEEEEEccCCCCeEEEEeCCCcce
Q psy14511 322 TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHL 397 (488)
Q Consensus 322 ~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~ 397 (488)
.+|...|.+++|+|+++++++++ |+.|++||+++++....+... +..+..+++++++ ++.|+.|++||+.+++.
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s--~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVS--AAADGSIRGWDANDYSR 384 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEE--EETTSEEEEEETTTCCE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEE--EeCCCcEEEEECCCCce
Confidence 88999999999999999999999 699999999987654444322 3345556788888 78999999999998876
Q ss_pred eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc--cccccCCcceEEee
Q psy14511 398 IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR--KARQVGSGSSLEFA 455 (488)
Q Consensus 398 ~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~--~~~~~~~v~~~~~s 455 (488)
..... |...+..++|+|++++|++++ ||.|++||+.+++... ...+...+.+++|+
T Consensus 385 ~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 385 KFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK 442 (464)
T ss_dssp EEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE
T ss_pred eeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec
Confidence 66554 667788899999999999998 9999999999999874 46778889999997
No 70
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.4e-37 Score=287.90 Aligned_cols=298 Identities=16% Similarity=0.270 Sum_probs=248.0
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
.++|++|++|+.||+|++||+.+++.+ ..+.+|.+.|.+++|+ +++|++|+ |+.|++||+.+++ .+..+.+|.
T Consensus 126 ~~~g~~l~sg~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~h~ 199 (445)
T 2ovr_B 126 QFCGNRIVSGSDDNTLKVWSAVTGKCL-RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE---CIHTLYGHT 199 (445)
T ss_dssp EEETTEEEEEETTSCEEEEETTTCCEE-EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE---EEEEECCCS
T ss_pred EEcCCEEEEEECCCcEEEEECCCCcEE-EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc---EEEEECCCC
Confidence 358999999999999999999988844 6688999999999998 66999998 9999999998754 445567899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
..|.++.|+ ++.+++++. |++|++||+.+++.+..+..+...
T Consensus 200 ~~v~~~~~~--~~~l~s~s~---dg~i~~wd~~~~~~~~~~~~~~~~--------------------------------- 241 (445)
T 2ovr_B 200 STVRCMHLH--EKRVVSGSR---DATLRVWDIETGQCLHVLMGHVAA--------------------------------- 241 (445)
T ss_dssp SCEEEEEEE--TTEEEEEET---TSEEEEEESSSCCEEEEEECCSSC---------------------------------
T ss_pred CcEEEEEec--CCEEEEEeC---CCEEEEEECCCCcEEEEEcCCccc---------------------------------
Confidence 999999996 446666665 999999999998877666554221
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~ 240 (488)
+.++.++++.+++++.|+.|++||+.+++....+.. |
T Consensus 242 ----------------------------------------v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~ 278 (445)
T 2ovr_B 242 ----------------------------------------VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG---H 278 (445)
T ss_dssp ----------------------------------------EEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECC---C
T ss_pred ----------------------------------------EEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecC---C
Confidence 223444567789999999999999999887666553 8
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCcccee
Q psy14511 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTA 320 (488)
Q Consensus 241 ~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 320 (488)
...+.+++| +++.++++ +.|+.|++||+++++.+..+.+|...+.++.++++.+++++.||.|++||+++++ ....
T Consensus 279 ~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~ 354 (445)
T 2ovr_B 279 TNRVYSLQF--DGIHVVSG-SLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ-CLQT 354 (445)
T ss_dssp SSCEEEEEE--CSSEEEEE-ETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCC-EEEE
T ss_pred CCceEEEEE--CCCEEEEE-eCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCc-EEEE
Confidence 889999999 77889988 9999999999999999999999999999999999999999999999999998864 5555
Q ss_pred eec---CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce--------ee--eeecCCCCEEEEEccCCCCe
Q psy14511 321 ITR---EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL--------IV--PKLKREGRELVTSHGKQDCS 386 (488)
Q Consensus 321 ~~~---~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~--------~~--~~~~~~~~~l~~~~g~~~~~ 386 (488)
+.. |...|.+++|+ +++|++++ ||.|++||+.+++....+.. .+ .+|+|++..+++ |+.||+
T Consensus 355 ~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~--~~~dg~ 430 (445)
T 2ovr_B 355 LQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV--GSRNGT 430 (445)
T ss_dssp ECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEE--ECSSSS
T ss_pred EccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEE--cccCCC
Confidence 554 88899999995 57899998 69999999998865544411 11 289999999999 788887
Q ss_pred ----EEEEeCCC
Q psy14511 387 ----LKMWEYPR 394 (488)
Q Consensus 387 ----i~i~d~~~ 394 (488)
+.+||+..
T Consensus 431 ~~~~l~v~df~~ 442 (445)
T 2ovr_B 431 EETKLLVLDFDV 442 (445)
T ss_dssp SCCEEEEEECCC
T ss_pred CccEEEEEECCC
Confidence 99999864
No 71
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-37 Score=283.81 Aligned_cols=298 Identities=25% Similarity=0.437 Sum_probs=254.6
Q ss_pred cccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEE
Q psy14511 179 PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV 258 (488)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 258 (488)
.+..+..+.+++..+....++++..++|+++.+++++.|+.|++|++.+++........ +...|.+++|+|++++|++
T Consensus 74 ~r~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~ 151 (401)
T 4aez_A 74 KRRFNTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETD--ESTYVASVKWSHDGSFLSV 151 (401)
T ss_dssp -CCCCCSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECC--TTCCEEEEEECTTSSEEEE
T ss_pred cCcCCCCcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecC--CCCCEEEEEECCCCCEEEE
Confidence 35566777888888888888999999999999999999999999999999987776654 6889999999999999999
Q ss_pred EeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCc
Q psy14511 259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR 338 (488)
Q Consensus 259 ~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 338 (488)
+ +.||.|++||+.+++.+..+.+|...|.+++|+++.+++++.||.|++||++........+..|...|.+++|+|+++
T Consensus 152 ~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 230 (401)
T 4aez_A 152 G-LGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL 230 (401)
T ss_dssp E-ETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred E-CCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC
Confidence 9 899999999999999999999999999999999999999999999999999976677888899999999999999999
Q ss_pred EEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEE-ccCCCCeEEEEeCCCcceeEEEeeccccEEEE
Q psy14511 339 YLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTS-HGKQDCSLKMWEYPRLHLIEELKIHQERILSA 411 (488)
Q Consensus 339 ~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~-~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~ 411 (488)
+|++++ |+.|++||+++.+....+... ..+|+|++..++++ +|+.|+.|++||+.+++.+..+. +...|.++
T Consensus 231 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~ 309 (401)
T 4aez_A 231 QLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSL 309 (401)
T ss_dssp EEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEE
T ss_pred EEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEE
Confidence 999999 699999999986544333221 22899977655544 34589999999999999988886 66789999
Q ss_pred EEcCCCCEEEEEe--CCCcEEEEecCCCCccc---cccccCCcceEEeecCCCceEEEEeeecccccceeeEEEEeeccc
Q psy14511 412 VLSPDQTCVAAAS--ADETISIWNCFPRDKKR---KARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVFGE 486 (488)
Q Consensus 412 ~~s~~~~~l~t~~--~dg~v~iw~~~~~~~~~---~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~ 486 (488)
+|+|++++|++++ .||.|++|++.+++... ...|...+.+++|+|+++.+ +.+..+..+.+|...+|+
T Consensus 310 ~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l-------~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 310 IWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRIL-------STAASDENLKFWRVYDGD 382 (401)
T ss_dssp EECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEE-------EEECTTSEEEEEECCC--
T ss_pred EECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEE-------EEEeCCCcEEEEECCCCc
Confidence 9999999999954 89999999999876543 45788999999999999876 445677888889888876
Q ss_pred c
Q psy14511 487 A 487 (488)
Q Consensus 487 ~ 487 (488)
.
T Consensus 383 ~ 383 (401)
T 4aez_A 383 H 383 (401)
T ss_dssp -
T ss_pred c
Confidence 4
No 72
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-38 Score=288.34 Aligned_cols=194 Identities=15% Similarity=0.140 Sum_probs=158.4
Q ss_pred CCCceEEEEEcCCCCeEEEEe-CCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTN-TCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD 316 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~-~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~ 316 (488)
+...+.+++|+|||+++++++ +.|++|++||+++++++..+. |...|.+++| +++++++++.++ +.+|+..++..
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~ 209 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSC 209 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCE
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcc
Confidence 455689999999999987652 468999999999999988885 7788999999 789999988555 66666665543
Q ss_pred c-ceeeecCCccEEEEEEccCCcEEEEEe-cC----eEEEEECCCCCCCcc----cc-----eeeeeecCCCCEEEEEcc
Q psy14511 317 Y-PTAITREGDVVCGLKWSPNGRYLASGS-NN----TVKIWDFRQLDAKRP----LG-----LIVPKLKREGRELVTSHG 381 (488)
Q Consensus 317 ~-~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~----~i~iwd~~~~~~~~~----~~-----~~~~~~~~~~~~l~~~~g 381 (488)
. ......|...|.+++|+|+++++++++ ++ .+++|++........ +. ....+|+|+|++|++ |
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las--g 287 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL--A 287 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE--E
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE--E
Confidence 3 234567888999999999999999988 54 688888876532111 11 112289999999999 7
Q ss_pred CCCCeEEEEeCCCcceeEEE-eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511 382 KQDCSLKMWEYPRLHLIEEL-KIHQERILSAVLSPDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 382 ~~~~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
+.|++|+|||+++++++.++ .+|..+|++++|||||++||+||.|++|+||++.+.
T Consensus 288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89999999999999999875 789999999999999999999999999999999754
No 73
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.1e-37 Score=270.73 Aligned_cols=252 Identities=17% Similarity=0.269 Sum_probs=201.1
Q ss_pred eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC--CCeEEeeeCCcccce
Q psy14511 30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQT 106 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~ 106 (488)
..+.+|.+.|++++|+|+|++||+|+ |++|+|||+.+.. .+.+..+.+|.++|.+++|+++ +++|++++. |++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~---D~~ 78 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK 78 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEET---TTE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-cEEEEEEccccCCeEEEEecCCCcCCEEEEEcC---CCE
Confidence 35679999999999999999999998 9999999997532 3456678899999999999864 666666665 999
Q ss_pred EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511 107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP 186 (488)
Q Consensus 107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
|++||+.+++...
T Consensus 79 v~iWd~~~~~~~~------------------------------------------------------------------- 91 (297)
T 2pm7_B 79 VMIWKEENGRWSQ------------------------------------------------------------------- 91 (297)
T ss_dssp EEEEEBSSSCBCC-------------------------------------------------------------------
T ss_pred EEEEEcCCCceEE-------------------------------------------------------------------
Confidence 9999987653110
Q ss_pred ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCC
Q psy14511 187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTE 264 (488)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~ 264 (488)
...+.+ |...|.+++|+|+ +.+|+++ +.|+
T Consensus 92 ----------------------------------------------~~~~~~-h~~~v~~v~~~p~~~g~~l~s~-s~d~ 123 (297)
T 2pm7_B 92 ----------------------------------------------IAVHAV-HSASVNSVQWAPHEYGPMLLVA-SSDG 123 (297)
T ss_dssp ----------------------------------------------CEEECC-CSSCEEEEEECCGGGCSEEEEE-ETTS
T ss_pred ----------------------------------------------EEEeec-CCCceeEEEeCcCCCCcEEEEE-ECCC
Confidence 001112 7788999999998 7888888 9999
Q ss_pred cEEEEECCcce--eeeeeccccccEEEEEec---------------CCEEEEeecCCeEEEEECcCCCc---cceeeecC
Q psy14511 265 YIDLWHEQEER--LIQKLRTHMHQVIAMCWN---------------GNLLSCGTIGGNILHYDVRTHSD---YPTAITRE 324 (488)
Q Consensus 265 ~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~---------------~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~ 324 (488)
.|++||++.+. ....+.+|...|.+++|. +++|++|+.|+.|++||+++... ....+.+|
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 99999998753 245677899999999994 35899999999999999987542 34567889
Q ss_pred CccEEEEEEccCC---cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEE
Q psy14511 325 GDVVCGLKWSPNG---RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEE 400 (488)
Q Consensus 325 ~~~i~~~~~s~~~---~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~ 400 (488)
...|.+++|+|++ ++||+++ |+.|++||+++... . .....
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~-------------------------~-----------~~~~~ 247 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG-------------------------P-----------WKKTL 247 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS-------------------------C-----------CEEEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC-------------------------c-----------cceee
Confidence 9999999999985 8899998 69999998864310 0 00111
Q ss_pred E--eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511 401 L--KIHQERILSAVLSPDQTCVAAASADETISIWNCFP 436 (488)
Q Consensus 401 ~--~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~ 436 (488)
+ ..|...|.+++|+|++++||+++.||.|++|+...
T Consensus 248 ~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 1 35778899999999999999999999999999863
No 74
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.3e-37 Score=285.29 Aligned_cols=301 Identities=17% Similarity=0.334 Sum_probs=229.4
Q ss_pred cccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEe
Q psy14511 33 TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111 (488)
Q Consensus 33 ~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd 111 (488)
.+|...|.+++| ++++|++|+ |+.|++||+.+++ ....+.+|.+.|.+++| +++.+++++. ||+|++||
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~--~~~~l~sg~~---dg~i~vwd 199 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE---CKRILTGHTGSVLCLQY--DERVIITGSS---DSTVRVWD 199 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC---EEEEECCCSSCEEEEEC--CSSEEEEEET---TSCEEEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe---EEEEEcCCCCcEEEEEE--CCCEEEEEcC---CCeEEEEE
Confidence 356677988877 799999998 9999999998744 44557789999999999 6667766665 99999999
Q ss_pred cCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeec
Q psy14511 112 SMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE 191 (488)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (488)
+.+++.+..+..+..
T Consensus 200 ~~~~~~~~~~~~h~~----------------------------------------------------------------- 214 (435)
T 1p22_A 200 VNTGEMLNTLIHHCE----------------------------------------------------------------- 214 (435)
T ss_dssp SSSCCEEEEECCCCS-----------------------------------------------------------------
T ss_pred CCCCcEEEEEcCCCC-----------------------------------------------------------------
Confidence 999987766654422
Q ss_pred CCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE-EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEE
Q psy14511 192 APSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL-VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH 270 (488)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d 270 (488)
.+.++.++++.+++++.|+.|++||+.++..... ....+ |...|.+++| ++++++++ +.||.|++||
T Consensus 215 --------~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~s~-~~dg~i~vwd 282 (435)
T 1p22_A 215 --------AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG-HRAAVNVVDF--DDKYIVSA-SGDRTIKVWN 282 (435)
T ss_dssp --------CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECC-CSSCEEEEEE--ETTEEEEE-ETTSEEEEEE
T ss_pred --------cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecC-CCCcEEEEEe--CCCEEEEE-eCCCeEEEEE
Confidence 1233555667889999999999999998875533 23334 8899999999 67899988 9999999999
Q ss_pred CCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEE
Q psy14511 271 EQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVK 349 (488)
Q Consensus 271 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~ 349 (488)
+++++.+..+.+|...+.++.++++.+++|+.||.|++||++++ .....+.+|...|.+++| ++++|++++ ||.|+
T Consensus 283 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 283 TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIK 359 (435)
T ss_dssp TTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred CCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCC-CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence 99999999999999999999999999999999999999999986 467788899999999998 788999998 69999
Q ss_pred EEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcE
Q psy14511 350 IWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETI 429 (488)
Q Consensus 350 iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v 429 (488)
+||+.+...... .....++..+.+|.+.|++++| ++++|++++.||.|
T Consensus 360 vwd~~~~~~~~~------------------------------~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i 407 (435)
T 1p22_A 360 VWDLVAALDPRA------------------------------PAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTI 407 (435)
T ss_dssp EEEHHHHTSTTS------------------------------CTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEE
T ss_pred EEECCCCCCccc------------------------------cccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEE
Confidence 999865421100 0112256778889999999999 78899999999999
Q ss_pred EEEecCCCCccccccccCCcceEEee
Q psy14511 430 SIWNCFPRDKKRKARQVGSGSSLEFA 455 (488)
Q Consensus 430 ~iw~~~~~~~~~~~~~~~~v~~~~~s 455 (488)
++||+.+...........+..++.|.
T Consensus 408 ~iwd~~~~~~~~~~~~~~~~~~~~~~ 433 (435)
T 1p22_A 408 LIWDFLNDPAAQAEPPRSPSRTYTYI 433 (435)
T ss_dssp EEEC----------------------
T ss_pred EEEECCCCCCcccCCCCCCccceeee
Confidence 99999987766554444455555544
No 75
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=283.39 Aligned_cols=316 Identities=18% Similarity=0.294 Sum_probs=224.2
Q ss_pred ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCc--------CCCcccccccc------------cceeEEEEecCC
Q psy14511 34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDA--------KRPQVNNQCHL------------SAVKAIAWCPWE 92 (488)
Q Consensus 34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~--------~~~~~~~~~h~------------~~v~~l~~~~~~ 92 (488)
.|.+.|++++|+|+|++||+|+ |+.|+|||+.+++. ......+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 5778999999999999999998 99999999987542 11344577898 889999999998
Q ss_pred --CeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511 93 --PTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ 170 (488)
Q Consensus 93 --~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (488)
..+++++. |++|++||+.++............. +.+.....
T Consensus 106 ~~~~l~s~s~---d~~i~iw~~~~~~~~~~~~~~~~~~---------------------------g~~~~~~~------- 148 (447)
T 3dw8_B 106 NAAQFLLSTN---DKTIKLWKISERDKRPEGYNLKEED---------------------------GRYRDPTT------- 148 (447)
T ss_dssp SSSEEEEEEC---SSCEEEEEEEEEEEEEECCSCC-----------------------------------CCC-------
T ss_pred CcceEEEeCC---CCeEEEEecccccCCcceecccCcc---------------------------ccccCccc-------
Confidence 66777766 9999999997765432111100000 00000000
Q ss_pred eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEc
Q psy14511 171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWK 250 (488)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~ 250 (488)
...+..+ .+. +.. |... ...... ...+ |...|.+++|+
T Consensus 149 ----------------~~~~~~~---------~~~--~~~------------~~~~-~~~~~~-~~~~-h~~~v~~~~~~ 186 (447)
T 3dw8_B 149 ----------------VTTLRVP---------VFR--PMD------------LMVE-ASPRRI-FANA-HTYHINSISIN 186 (447)
T ss_dssp ----------------CCSCCCC---------EEE--EEE------------EEEE-EEEEEE-ECSC-CSSCCCEEEEC
T ss_pred ----------------ccceEec---------ccc--chh------------eeee-ccceEE-eccC-CCcceEEEEEc
Confidence 0000000 000 000 0000 001111 1223 88999999999
Q ss_pred CCCCeEEEEeCCCCcEEEEECCc-ceeee-------eeccccccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCc---
Q psy14511 251 PRTTDLAVTNTCTEYIDLWHEQE-ERLIQ-------KLRTHMHQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSD--- 316 (488)
Q Consensus 251 ~~~~~l~~~~~~~~~i~i~d~~~-~~~~~-------~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~--- 316 (488)
|++++++++ .|+.|++||++. ++.+. .+.+|...|.+++| ++ +++++++.||.|++||++++..
T Consensus 187 ~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 187 SDYETYLSA--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp TTSSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred CCCCEEEEe--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 999999887 599999999994 44444 35689999999999 45 8999999999999999998653
Q ss_pred cceeeecCCc------------cEEEEEEccCCcEEEEEecCeEEEEECCC-CCCCcccceee-----------------
Q psy14511 317 YPTAITREGD------------VVCGLKWSPNGRYLASGSNNTVKIWDFRQ-LDAKRPLGLIV----------------- 366 (488)
Q Consensus 317 ~~~~~~~~~~------------~i~~~~~s~~~~~l~~~~d~~i~iwd~~~-~~~~~~~~~~~----------------- 366 (488)
....+..|.. .|.+++|+|++++|++++++.|++||+++ .+....+....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 1567777775 89999999999999999899999999987 54444333221
Q ss_pred ---eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec---------------------------------cccEEE
Q psy14511 367 ---PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH---------------------------------QERILS 410 (488)
Q Consensus 367 ---~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~---------------------------------~~~v~~ 410 (488)
.+|+|+++++++ |+.|+.|++||+.+++.+ .+.+| ...|..
T Consensus 345 ~~~~~~s~~~~~l~s--~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 421 (447)
T 3dw8_B 345 KFECCWNGSDSVVMT--GSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH 421 (447)
T ss_dssp CCCEEECTTSSEEEE--ECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred ceEEEECCCCCEEEE--eccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence 489999999988 899999999999998765 33322 346889
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEec
Q psy14511 411 AVLSPDQTCVAAASADETISIWNC 434 (488)
Q Consensus 411 ~~~s~~~~~l~t~~~dg~v~iw~~ 434 (488)
++|+|++++||+++.++ +++|.-
T Consensus 422 ~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 422 TAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EEECSSSSEEEEECSSC-EEEEEC
T ss_pred EEECCCCCEEEEEecce-eeeecc
Confidence 99999999999998876 777764
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.3e-37 Score=275.33 Aligned_cols=255 Identities=20% Similarity=0.268 Sum_probs=195.8
Q ss_pred cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEec--CCCeEEeeeCCccc
Q psy14511 28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP--WEPTLLATGGGICD 104 (488)
Q Consensus 28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~~~~~~~~d 104 (488)
+...+.+|.+.|++++|+|+|++||+|+ |++|+|||+.++.. ..+..+.+|.+.|.+++|++ +++.|++++. |
T Consensus 5 ~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~---D 80 (316)
T 3bg1_A 5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-ILIADLRGHEGPVWQVAWAHPMYGNILASCSY---D 80 (316)
T ss_dssp ---------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-EEEEEEECCSSCEEEEEECCGGGSSCEEEEET---T
T ss_pred eeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-EEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC---C
Confidence 3456789999999999999999999998 99999999986432 23456789999999999986 3777666665 9
Q ss_pred ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511 105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA 184 (488)
Q Consensus 105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
++|++||+.++...
T Consensus 81 ~~v~iWd~~~~~~~------------------------------------------------------------------ 94 (316)
T 3bg1_A 81 RKVIIWREENGTWE------------------------------------------------------------------ 94 (316)
T ss_dssp SCEEEECCSSSCCC------------------------------------------------------------------
T ss_pred CEEEEEECCCCcce------------------------------------------------------------------
Confidence 99999998765310
Q ss_pred CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCC
Q psy14511 185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTC 262 (488)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~ 262 (488)
....+.+ |...|.+++|+|+ +.+|+++ +.
T Consensus 95 -----------------------------------------------~~~~~~~-h~~~V~~v~~~p~~~g~~lasg-s~ 125 (316)
T 3bg1_A 95 -----------------------------------------------KSHEHAG-HDSSVNSVCWAPHDYGLILACG-SS 125 (316)
T ss_dssp -----------------------------------------------EEEEECC-CSSCCCEEEECCTTTCSCEEEE-CS
T ss_pred -----------------------------------------------EEEEccC-CCCceEEEEECCCCCCcEEEEE-cC
Confidence 0111222 7888999999998 7788888 99
Q ss_pred CCcEEEEECCcce---eeeeeccccccEEEEEec-------------------CCEEEEeecCCeEEEEECcCCC--ccc
Q psy14511 263 TEYIDLWHEQEER---LIQKLRTHMHQVIAMCWN-------------------GNLLSCGTIGGNILHYDVRTHS--DYP 318 (488)
Q Consensus 263 ~~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~-------------------~~~l~~~~~dg~i~i~d~~~~~--~~~ 318 (488)
|+.|++||++.+. ....+.+|...+.+++|. +++|++|+.|+.|++||++... ...
T Consensus 126 D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~ 205 (316)
T 3bg1_A 126 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE 205 (316)
T ss_dssp SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEE
T ss_pred CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcccee
Confidence 9999999998753 245567888899888883 2589999999999999997543 245
Q ss_pred eeeecCCccEEEEEEccCC----cEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCC
Q psy14511 319 TAITREGDVVCGLKWSPNG----RYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYP 393 (488)
Q Consensus 319 ~~~~~~~~~i~~~~~s~~~----~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~ 393 (488)
..+.+|...|.+++|+|++ ++|++++ |++|++||+.+... +
T Consensus 206 ~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~--------------------------~-------- 251 (316)
T 3bg1_A 206 QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS--------------------------N-------- 251 (316)
T ss_dssp ECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC--------------------------C--------
T ss_pred eecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc--------------------------c--------
Confidence 6678899999999999987 7899988 69999998875310 0
Q ss_pred CcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511 394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP 436 (488)
Q Consensus 394 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~ 436 (488)
......+..|...|++++|+|++++||+++.||.|++|+...
T Consensus 252 -~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 252 -TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp -CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred -chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 001123456888999999999999999999999999999763
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.2e-36 Score=275.79 Aligned_cols=303 Identities=14% Similarity=0.268 Sum_probs=220.8
Q ss_pred cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcC-CCcccccccccceeEEEEec--CCCeEEeeeCCcc
Q psy14511 28 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK-RPQVNNQCHLSAVKAIAWCP--WEPTLLATGGGIC 103 (488)
Q Consensus 28 ~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~--~~~~l~~~~~~~~ 103 (488)
+...+.+|.+.|++++|+|++++||+++ |+.|++||+.++... .....+.+|...|.+++|+| ++++|++++.
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~--- 79 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY--- 79 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET---
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC---
Confidence 3456789999999999999999999998 999999999864322 34455678999999999999 5877777776
Q ss_pred cceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511 104 DQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK 183 (488)
Q Consensus 104 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (488)
|+.|++||+.+++....
T Consensus 80 dg~v~vwd~~~~~~~~~--------------------------------------------------------------- 96 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECS--------------------------------------------------------------- 96 (351)
T ss_dssp TSCEEEEEECTTSCTTS---------------------------------------------------------------
T ss_pred CCeEEEEecCCCccccc---------------------------------------------------------------
Confidence 99999999987652100
Q ss_pred CCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeC
Q psy14511 184 AKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNT 261 (488)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~ 261 (488)
.........+.. |...|.+++|+|+ +++++++ +
T Consensus 97 -------------------------------------------~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~-~ 131 (351)
T 3f3f_A 97 -------------------------------------------GRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACL-G 131 (351)
T ss_dssp -------------------------------------------SCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEE-E
T ss_pred -------------------------------------------ccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEe-c
Confidence 000011122223 7889999999999 9999999 9
Q ss_pred CCCcEEEEECCcceeeeeec-------------cccccEEEEEe--c---CCEEEEeecCCeEEEEECcCCCc-cceeee
Q psy14511 262 CTEYIDLWHEQEERLIQKLR-------------THMHQVIAMCW--N---GNLLSCGTIGGNILHYDVRTHSD-YPTAIT 322 (488)
Q Consensus 262 ~~~~i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~--~---~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~ 322 (488)
.|+.|++||+++++.+..+. .|...+.+++| + +..+++++.++.+.+|+...... ....+.
T Consensus 132 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (351)
T 3f3f_A 132 NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP 211 (351)
T ss_dssp TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC
T ss_pred CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC
Confidence 99999999998876544432 57778899998 3 78999999999998888776542 356677
Q ss_pred cCCccEEEEEEccCC----cEEEEEe-cCeEEEEECCCCCCCcccceeee-----eecCCCCEEEEE--ccCCCCeEEEE
Q psy14511 323 REGDVVCGLKWSPNG----RYLASGS-NNTVKIWDFRQLDAKRPLGLIVP-----KLKREGRELVTS--HGKQDCSLKMW 390 (488)
Q Consensus 323 ~~~~~i~~~~~s~~~----~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~g~~~~~i~i~ 390 (488)
.|...|.+++|+|++ ++|++++ |+.|++||++............. ..++........ .+.....+.+|
T Consensus 212 ~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
T 3f3f_A 212 GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ 291 (351)
T ss_dssp CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence 899999999999998 8999999 69999999986543222211111 222222222221 12334556677
Q ss_pred eCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511 391 EYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR 441 (488)
Q Consensus 391 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~ 441 (488)
+..+.+.+..+.+|...|++++|+|++++|++++.||.|++|++.+++...
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred ccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 777778889999999999999999999999999999999999999876553
No 78
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.8e-36 Score=271.68 Aligned_cols=279 Identities=10% Similarity=0.077 Sum_probs=230.2
Q ss_pred eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCC-eEEeeeCCcccceEE
Q psy14511 31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP-TLLATGGGICDQTVR 108 (488)
Q Consensus 31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~~~~~~~~d~~i~ 108 (488)
...+|.+.|++++|+|++++|++++ |+.|++||+.+++.........+|...|.+++|+|+++ ++++++. |+.|+
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~ 82 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---QGEIL 82 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---TSCEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC---CCeEE
Confidence 3468999999999999999999998 99999999987553223444568999999999999998 7777776 99999
Q ss_pred EEec-CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511 109 LWNS-MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE 187 (488)
Q Consensus 109 vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
+||+ .+++.. .+
T Consensus 83 ~wd~~~~~~~~-~~------------------------------------------------------------------ 95 (342)
T 1yfq_A 83 KVDLIGSPSFQ-AL------------------------------------------------------------------ 95 (342)
T ss_dssp EECSSSSSSEE-EC------------------------------------------------------------------
T ss_pred EEEeccCCceE-ec------------------------------------------------------------------
Confidence 9998 765420 00
Q ss_pred eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511 188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267 (488)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~ 267 (488)
.... |...|.+++|+| ++.++++ +.|+.|+
T Consensus 96 -----------------------------------------------~~~~-~~~~v~~l~~~~-~~~l~s~-~~d~~i~ 125 (342)
T 1yfq_A 96 -----------------------------------------------TNNE-ANLGICRICKYG-DDKLIAA-SWDGLIE 125 (342)
T ss_dssp -----------------------------------------------BSCC-CCSCEEEEEEET-TTEEEEE-ETTSEEE
T ss_pred -----------------------------------------------cccC-CCCceEEEEeCC-CCEEEEE-cCCCeEE
Confidence 0001 677899999999 8899988 9999999
Q ss_pred EEECCc---------ceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcC-CCc-cceeeecCCccEEEEEEcc-
Q psy14511 268 LWHEQE---------ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRT-HSD-YPTAITREGDVVCGLKWSP- 335 (488)
Q Consensus 268 i~d~~~---------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~-~~~~~~~~~~~i~~~~~s~- 335 (488)
+||+++ ++++..+. |...+.++++++..+++++.++.|++||+++ ... .......|...+.+++|+|
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 204 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPK 204 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSG
T ss_pred EEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCC
Confidence 999988 77777776 8899999999777799999999999999987 543 3334556788899999999
Q ss_pred CCcEEEEEe-cCeEEEEECCCC------CCCcccce------------e--eeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511 336 NGRYLASGS-NNTVKIWDFRQL------DAKRPLGL------------I--VPKLKREGRELVTSHGKQDCSLKMWEYPR 394 (488)
Q Consensus 336 ~~~~l~~~~-d~~i~iwd~~~~------~~~~~~~~------------~--~~~~~~~~~~l~~~~g~~~~~i~i~d~~~ 394 (488)
+++++++++ |+.+++|+++.. +....+.. . ..+|+|+++++++ ++.||.|++||+.+
T Consensus 205 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 205 EQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYT--AGSDGIISCWNLQT 282 (342)
T ss_dssp GGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEE--EETTSCEEEEETTT
T ss_pred CCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEE--ecCCceEEEEcCcc
Confidence 999999999 599999999876 32222221 1 2289999999998 78899999999999
Q ss_pred cceeEEEeec-cccEEEEEEcCCCCEEEEEeCCCc-EEEEec
Q psy14511 395 LHLIEELKIH-QERILSAVLSPDQTCVAAASADET-ISIWNC 434 (488)
Q Consensus 395 ~~~~~~~~~~-~~~v~~~~~s~~~~~l~t~~~dg~-v~iw~~ 434 (488)
++.+..+.+| ..+|++++ |++++|++++.||. .+.|..
T Consensus 283 ~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 283 RKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp TEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred HhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 9999999998 99999999 99999999999998 555553
No 79
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-38 Score=286.35 Aligned_cols=308 Identities=9% Similarity=0.063 Sum_probs=232.3
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS 81 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~ 81 (488)
+.||+++|+++.|++|+ |....+ .+.+|...|.+++|+|+| .++.+.+|+ ++... ...+ .|..
T Consensus 24 SpDG~~iASas~D~TV~--d~~~~~----~l~gh~~~v~~V~FsPdg------~~~~~~~~~---~~~~~-~~~~-~~~~ 86 (588)
T 2j04_A 24 ARDGTLYLTTFPDISIG--QPKYAK----DINCNSKNLFHVKEFPLE------FENKLDFEL---AQQNG-LLNS-QPVC 86 (588)
T ss_dssp CTTSCEEEECSSSEEEE--EECCCS----CCSSBGGGTEEEEEECCC------CCCTTTTSC---CCSSC-SSTT-SCSC
T ss_pred CCCCCEEEEEcCCceee--cccccc----eecCCCccEEEEEECCCC------CcceEEEEe---CCCce-Eeec-CCCC
Confidence 34999999999999999 755443 347999999999999998 345444444 33222 2222 4588
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
.|.+++|+|||+.|++++. ||++++||... ++..+. +...+.
T Consensus 87 ~V~~vawSPdG~~LAs~s~---dg~V~iwd~~~--~l~~l~-~~~~~~-------------------------------- 128 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSN---NGNVSVFKDNK--MLTNLD-SKGNLS-------------------------------- 128 (588)
T ss_dssp CEEEEEECSSSSCEEEEET---TSCEEEEETTE--EEEECC-CSSCST--------------------------------
T ss_pred cEEEEEECCCCCEEEEEeC---CCcEEEEeCCc--eeeecc-CCCccc--------------------------------
Confidence 9999999999998888777 99999999533 333333 211100
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCce-------EE
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKT-------QL 232 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~-------~~ 232 (488)
...+.++.|+ +..+++++.||+|++||+.++.. ..
T Consensus 129 ------------------------------------~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ 172 (588)
T 2j04_A 129 ------------------------------------SRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFES 172 (588)
T ss_dssp ------------------------------------TTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEE
T ss_pred ------------------------------------cccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeee
Confidence 0112234444 35678888999999999998853 22
Q ss_pred EEe--cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee---eeee-ccccccEEEEEecCCEEEEeecCCeE
Q psy14511 233 LVE--YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL---IQKL-RTHMHQVIAMCWNGNLLSCGTIGGNI 306 (488)
Q Consensus 233 ~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~---~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~i 306 (488)
.+. ..+ |...|.+++|+|+| ++++ +.|+.|++||+..+.. ..++ .+|...|.+++|.++.+++++ ++.|
T Consensus 173 ti~~~~~g-h~~~V~sVawSPdg--Laas-s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tI 247 (588)
T 2j04_A 173 SIRLSDAG-SKDWVTHIVWYEDV--LVAA-LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYV 247 (588)
T ss_dssp EEECSCTT-CCCCEEEEEEETTE--EEEE-ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEE
T ss_pred eeeccccc-ccccEEEEEEcCCc--EEEE-eCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeE
Confidence 222 244 78899999999999 6666 7899999999988763 3456 478889999999878898887 6999
Q ss_pred EEEECcCCCccceeeecCCccEEEEEE--ccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCC
Q psy14511 307 LHYDVRTHSDYPTAITREGDVVCGLKW--SPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQ 383 (488)
Q Consensus 307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 383 (488)
++||+.+.. ......+|...+..++| +|++..|+++. +|+ ++|.... ..++|++..++. .
T Consensus 248 kLWd~~~~~-~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~-----------~~~spd~~l~a~--~-- 310 (588)
T 2j04_A 248 HKIDLKNYS-ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE-----------LHVTADNIIAPY--L-- 310 (588)
T ss_dssp EEEETTTTE-EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS-----------EEEECCCSSHHH--H--
T ss_pred EEEECCCCe-EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc-----------EEECCCceEEEE--c--
Confidence 999998753 32333379999999999 99999999999 588 9999872 248999988877 3
Q ss_pred CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511 384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS 424 (488)
Q Consensus 384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~ 424 (488)
|+++++|+..... +..+.+ ...|++++|||||+.+|+++
T Consensus 311 d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 311 EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEE
Confidence 9999999975444 445554 67799999999999999987
No 80
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-35 Score=262.63 Aligned_cols=270 Identities=11% Similarity=0.157 Sum_probs=218.8
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA 82 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~ 82 (488)
++++||+|+.||.|++||+.+++ ....+..|...|.+++|+|++++|++++ |+.|++|++........+..+.+|...
T Consensus 28 ~~~~l~s~~~dg~v~vw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~ 106 (313)
T 3odt_A 28 DDSKVASVSRDGTVRLWSKDDQW-LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGN 106 (313)
T ss_dssp ETTEEEEEETTSEEEEEEESSSE-EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSC
T ss_pred CCCEEEEEEcCCcEEEEECCCCE-EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccC
Confidence 78899999999999999998876 4466788999999999999999999998 999999999876666667778889999
Q ss_pred eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511 83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS 162 (488)
Q Consensus 83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (488)
|.++.| +++.+++++. |+.|++|| .++....+..+...+..+.+.
T Consensus 107 i~~~~~--~~~~l~~~~~---d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~---------------------------- 151 (313)
T 3odt_A 107 VCSLSF--QDGVVISGSW---DKTAKVWK--EGSLVYNLQAHNASVWDAKVV---------------------------- 151 (313)
T ss_dssp EEEEEE--ETTEEEEEET---TSEEEEEE--TTEEEEEEECCSSCEEEEEEE----------------------------
T ss_pred EEEEEe--cCCEEEEEeC---CCCEEEEc--CCcEEEecccCCCceeEEEEc----------------------------
Confidence 999999 4567777766 99999999 555555555443322211111
Q ss_pred cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511 163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA 242 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~ 242 (488)
...++.+++++.|+.|++|| .++....+.. .+..
T Consensus 152 ------------------------------------------~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~--~~~~ 185 (313)
T 3odt_A 152 ------------------------------------------SFSENKFLTASADKTIKLWQ--NDKVIKTFSG--IHND 185 (313)
T ss_dssp ------------------------------------------ETTTTEEEEEETTSCEEEEE--TTEEEEEECS--SCSS
T ss_pred ------------------------------------------cCCCCEEEEEECCCCEEEEe--cCceEEEEec--cCcc
Confidence 11346788888999999999 3333333332 2788
Q ss_pred ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec-CCEEEEeecCCeEEEEECcCCCccceee
Q psy14511 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAI 321 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 321 (488)
.+.+++|+|++. ++++ +.++.|++||+++++.+..+..|...+.+++|. ...+++++.||.|++||++++ .....+
T Consensus 186 ~i~~~~~~~~~~-~~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~ 262 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISC-SNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG-SLKQVI 262 (313)
T ss_dssp CEEEEEEEETTE-EEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTC-CEEEEE
T ss_pred cEEEEEEcCCCe-EEEc-cCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCC-ceeEEE
Confidence 999999999997 7777 899999999999999999999999999999993 227999999999999999986 467778
Q ss_pred ecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCC
Q psy14511 322 TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDA 358 (488)
Q Consensus 322 ~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~ 358 (488)
..|...|.+++|+|++++++.+.|+.|++||+++.+.
T Consensus 263 ~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 263 TLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp ECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGC
T ss_pred eccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCce
Confidence 8899999999999999966655579999999987643
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.8e-36 Score=278.51 Aligned_cols=274 Identities=15% Similarity=0.268 Sum_probs=214.7
Q ss_pred EEEeecCCeEEEEEcccCcc---cceeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcC----CCcccccc
Q psy14511 8 LSCGTIGGNILHYDVRTHSD---YPTAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAK----RPQVNNQC 78 (488)
Q Consensus 8 la~g~~dg~i~iwd~~~~~~---~~~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~----~~~~~~~~ 78 (488)
+++++.||.|+|||+..... ....+.+|.+.|++++|+| ++++|++|+ |+.|+|||+.++... ..+..+.+
T Consensus 50 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~ 129 (402)
T 2aq5_A 50 ICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG 129 (402)
T ss_dssp EBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred EEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC
Confidence 33578899999999966432 2345779999999999999 999999998 999999999875422 34566788
Q ss_pred cccceeEEEEecCCC-eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511 79 HLSAVKAIAWCPWEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK 157 (488)
Q Consensus 79 h~~~v~~l~~~~~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (488)
|...|.+++|+|+++ .+++++. |+.|++||+.+++.+..+.
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~----------------------------------- 171 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGC---DNVILVWDVGTGAAVLTLG----------------------------------- 171 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEET---TSCEEEEETTTTEEEEEEC-----------------------------------
T ss_pred CCCeEEEEEECcCCCCEEEEEcC---CCEEEEEECCCCCccEEEe-----------------------------------
Confidence 999999999999985 4555554 9999999998776432221
Q ss_pred eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511 158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP 237 (488)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~ 237 (488)
..
T Consensus 172 ------------------------------------------------------------------------------~~ 173 (402)
T 2aq5_A 172 ------------------------------------------------------------------------------PD 173 (402)
T ss_dssp ------------------------------------------------------------------------------TT
T ss_pred ------------------------------------------------------------------------------cC
Confidence 01
Q ss_pred CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee-cccccc-EEEEEe--cCCEEEEe---ecCCeEEEEE
Q psy14511 238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL-RTHMHQ-VIAMCW--NGNLLSCG---TIGGNILHYD 310 (488)
Q Consensus 238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~-v~~~~~--~~~~l~~~---~~dg~i~i~d 310 (488)
. |...|.+++|+|++++|+++ +.|+.|++||+++++.+..+ ..|... +.++.| +++++++| +.|+.|++||
T Consensus 174 ~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 174 V-HPDTIYSVDWSRDGALICTS-CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp T-CCSCEEEEEECTTSSCEEEE-ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred C-CCCceEEEEECCCCCEEEEE-ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence 2 77889999999999999999 99999999999999998888 678765 788888 68888888 7899999999
Q ss_pred CcCCCccceeee-cCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511 311 VRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL 387 (488)
Q Consensus 311 ~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i 387 (488)
+++......... .+...+.+++|+|++++|++++ |+.|++||+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~-------------------------------- 299 (402)
T 2aq5_A 252 TKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS-------------------------------- 299 (402)
T ss_dssp TTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS--------------------------------
T ss_pred CccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC--------------------------------
Confidence 998665444333 5677899999999999887553 46666666553
Q ss_pred EEEeCCCcce-eEEEee--ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511 388 KMWEYPRLHL-IEELKI--HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK 440 (488)
Q Consensus 388 ~i~d~~~~~~-~~~~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~ 440 (488)
++. +..+.. |..+|.+++|+|++.++++ .|+.+++|++.+++..
T Consensus 300 -------~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 300 -------EAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp -------STTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred -------CCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence 332 333333 4588999999999998875 5679999999886543
No 82
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.5e-36 Score=272.37 Aligned_cols=274 Identities=14% Similarity=0.210 Sum_probs=214.4
Q ss_pred CC-ceEEEeec---CCeEEEEEcccCcccceeecccCceEEEEEEccC---CcEEEEec-CCeEEEEeccccCcCCCccc
Q psy14511 4 NG-NLLSCGTI---GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKRPQVN 75 (488)
Q Consensus 4 dg-~~la~g~~---dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~---g~~las~~-d~~i~vwd~~~~~~~~~~~~ 75 (488)
++ .++++|+. ||.|+|||+.+++.......+|...|.+++|+|+ +++|++++ |+.|++||+.+++ ..+..
T Consensus 29 ~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~ 106 (357)
T 3i2n_A 29 CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE--MPVYS 106 (357)
T ss_dssp TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS--SCSEE
T ss_pred CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC--ccEEE
Confidence 66 45567766 9999999999887554555689999999999998 69999998 9999999998754 24556
Q ss_pred ccccccceeEEEE------ecCCCeEEeeeCCcccceEEEEecCCCe-eeeeeecCCCccccccccccccccceeEEEEE
Q psy14511 76 NQCHLSAVKAIAW------CPWEPTLLATGGGICDQTVRLWNSMNGK-EKCHVKTDSQQANDETISYREQKKRRHLSFLL 148 (488)
Q Consensus 76 ~~~h~~~v~~l~~------~~~~~~l~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (488)
+.+|...|.++.| +|+++.+++++. |+.|++||+.+++ ....+..+.....
T Consensus 107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~------------------- 164 (357)
T 3i2n_A 107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---DGTVKVWDPRQKDDPVANMEPVQGENK------------------- 164 (357)
T ss_dssp ECCCSSCEEEEEEESGGGCC-CCCEEEEEET---TSCEEEECTTSCSSCSEEECCCTTSCC-------------------
T ss_pred EEecccceEEEeeccccccCCCccEEEEEeC---CCeEEEEeCCCCCCcceeccccCCCCC-------------------
Confidence 7789999999965 678888777776 9999999998876 4444433211000
Q ss_pred eeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee------eCCCcEEEEECCCeEEE
Q psy14511 149 HGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD------WGYHDTLAVALDTSVYT 222 (488)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~~v~i 222 (488)
..+..+. ..+..+++++.|+.|++
T Consensus 165 --------------------------------------------------~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i 194 (357)
T 3i2n_A 165 --------------------------------------------------RDCWTVAFGNAYNQEERVVCAGYDNGDIKL 194 (357)
T ss_dssp --------------------------------------------------CCEEEEEEECCCC-CCCEEEEEETTSEEEE
T ss_pred --------------------------------------------------CceEEEEEEeccCCCCCEEEEEccCCeEEE
Confidence 0011111 22356777789999999
Q ss_pred EECCCCceEEEEecCCCCCCceEEEEEcC---CCCeEEEEeCCCCcEEEEECCcceeeeeec-----cccccEEEEEe--
Q psy14511 223 WNTKTNKTQLLVEYPTYDNAYISCVAWKP---RTTDLAVTNTCTEYIDLWHEQEERLIQKLR-----THMHQVIAMCW-- 292 (488)
Q Consensus 223 w~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~-- 292 (488)
||+.+++...... +...+.+++|+| +++.++++ +.||.|++||+++++....+. +|...|.+++|
T Consensus 195 ~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 269 (357)
T 3i2n_A 195 FDLRNMALRWETN----IKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP 269 (357)
T ss_dssp EETTTTEEEEEEE----CSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET
T ss_pred EECccCceeeecC----CCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC
Confidence 9999988755433 778999999999 89999999 999999999998877665554 89999999999
Q ss_pred cCC-EEEEeecCCeEEEEECcCCCc------------------cceeeecCCccEEEEEEccCCcEEE-EEe-cCeEEEE
Q psy14511 293 NGN-LLSCGTIGGNILHYDVRTHSD------------------YPTAITREGDVVCGLKWSPNGRYLA-SGS-NNTVKIW 351 (488)
Q Consensus 293 ~~~-~l~~~~~dg~i~i~d~~~~~~------------------~~~~~~~~~~~i~~~~~s~~~~~l~-~~~-d~~i~iw 351 (488)
+++ ++++++.||.|++||++.... ....+..|...|.+++|+|++++|+ +++ |+.|++|
T Consensus 270 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw 349 (357)
T 3i2n_A 270 QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVL 349 (357)
T ss_dssp TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEE
Confidence 455 899999999999999986432 3556788999999999999999998 677 6999999
Q ss_pred ECCCC
Q psy14511 352 DFRQL 356 (488)
Q Consensus 352 d~~~~ 356 (488)
|+.+.
T Consensus 350 ~~~~~ 354 (357)
T 3i2n_A 350 IVTKL 354 (357)
T ss_dssp EECC-
T ss_pred ECCCc
Confidence 99865
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.8e-35 Score=272.99 Aligned_cols=284 Identities=14% Similarity=0.135 Sum_probs=221.3
Q ss_pred ccCCceEEEeecCCeEEEEEcccCc-----ccceeecccCceEEEEEEccC----C---cEEEEec-CCeEEEEeccccC
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHS-----DYPTAITREGDVVCGLKWSPN----G---RYLASGS-NNTVKIWDFRQLD 68 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~-----~~~~~~~~h~~~V~~l~~sp~----g---~~las~~-d~~i~vwd~~~~~ 68 (488)
.|+.++||+|+.||.|+|||+.+++ .....+.+|...|.+++|+|+ + ++|++++ |+.|++||+.+++
T Consensus 23 ~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~ 102 (397)
T 1sq9_A 23 SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITRED 102 (397)
T ss_dssp EECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECT
T ss_pred EecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCc
Confidence 4566899999999999999999876 234567799999999999999 9 9999998 9999999998755
Q ss_pred cCCC--ccccccc-----ccceeEEEEe----cCCCe-EEeeeCCcccceEEEEecCC------Ceeee-----eeecCC
Q psy14511 69 AKRP--QVNNQCH-----LSAVKAIAWC----PWEPT-LLATGGGICDQTVRLWNSMN------GKEKC-----HVKTDS 125 (488)
Q Consensus 69 ~~~~--~~~~~~h-----~~~v~~l~~~----~~~~~-l~~~~~~~~d~~i~vwd~~~------~~~~~-----~~~~~~ 125 (488)
.... +..+..| ...|.+++|+ |++++ +++++. |+.|++||+.+ ++.+. .+...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~- 178 (397)
T 1sq9_A 103 ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV---KGTTYIWKFHPFADESNSLTLNWSPTLELQGT- 178 (397)
T ss_dssp TTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET---TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEE-
T ss_pred ccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC---CCcEEEEeCCccccccccceeeccCcceeeee-
Confidence 3111 4445667 5899999999 99988 777666 99999999987 43322 11100
Q ss_pred CccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee
Q psy14511 126 QQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD 205 (488)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (488)
..........+.++.
T Consensus 179 -----------------------------------------------------------------~~~~~~~~~~i~~~~ 193 (397)
T 1sq9_A 179 -----------------------------------------------------------------VESPMTPSQFATSVD 193 (397)
T ss_dssp -----------------------------------------------------------------ECCSSSSCCCCCEEE
T ss_pred -----------------------------------------------------------------eccccCCCCCceEEE
Confidence 000000112233455
Q ss_pred eCCC-cEEEEECCCeEEEEECCCCceEEEEecCCCC---CCceEEEEEcCCCCeEEEEeCCC---CcEEEEECCcceeee
Q psy14511 206 WGYH-DTLAVALDTSVYTWNTKTNKTQLLVEYPTYD---NAYISCVAWKPRTTDLAVTNTCT---EYIDLWHEQEERLIQ 278 (488)
Q Consensus 206 ~~~~-~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~~~---~~i~i~d~~~~~~~~ 278 (488)
|+++ .+++++.|+.|++||+.+++....+.....| ...+.+++|+|++++|+++ +.| +.|++||+++++.+.
T Consensus 194 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-~~d~~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 194 ISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFGCITLYETEFGERIG 272 (397)
T ss_dssp ECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEEEEEEEETTTCCEEE
T ss_pred ECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE-ecCCCCceEEEEECCCCcccc
Confidence 5443 5666679999999999998877776641114 7899999999999999999 888 999999999999999
Q ss_pred eecc-------------ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee------cC-------------
Q psy14511 279 KLRT-------------HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT------RE------------- 324 (488)
Q Consensus 279 ~~~~-------------~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~------------- 324 (488)
.+.. |...|.+++| ++++|++++.||.|++||+++. .....+. .|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (397)
T 1sq9_A 273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK-ERITTLNMHCDDIEIEEDILAVDEHGDS 351 (397)
T ss_dssp EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC-ceeEEEecccCcccchhhhhcccccccc
Confidence 9988 9999999999 6899999999999999999886 4566666 67
Q ss_pred --CccEEEEEEccCC----------cEEEEEe-cCeEEEEECCCC
Q psy14511 325 --GDVVCGLKWSPNG----------RYLASGS-NNTVKIWDFRQL 356 (488)
Q Consensus 325 --~~~i~~~~~s~~~----------~~l~~~~-d~~i~iwd~~~~ 356 (488)
...|.+++|+|++ ++|++++ |+.|++||+.++
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 8999999999998 7899888 699999998764
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.9e-35 Score=263.69 Aligned_cols=236 Identities=14% Similarity=0.221 Sum_probs=195.7
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY 317 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 317 (488)
|...|.+++|+|++++++++ +.|+.|++|+............+...+....+ +++.+++++.|+.+++||.......
T Consensus 85 h~~~V~~~~~s~dg~~l~s~-~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~ 163 (340)
T 4aow_A 85 HSHFVSDVVISSDGQFALSG-SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY 163 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred CCCCEEEEEECCCCCEEEEE-cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE
Confidence 88899999999999999999 99999999999998888888888888888877 6899999999999999999876656
Q ss_pred ceeeecCCccEEEEEEccCC--cEEEEEe-cCeEEEEECCCCCCCccccee-----eeeecCCCCEEEEEccCCCCeEEE
Q psy14511 318 PTAITREGDVVCGLKWSPNG--RYLASGS-NNTVKIWDFRQLDAKRPLGLI-----VPKLKREGRELVTSHGKQDCSLKM 389 (488)
Q Consensus 318 ~~~~~~~~~~i~~~~~s~~~--~~l~~~~-d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i 389 (488)
......|...+..++|++++ .++++++ |+.|++||+++.+....+... ..+|+|+++++++ |+.|+.|++
T Consensus 164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~s~Dg~i~i 241 (340)
T 4aow_A 164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCAS--GGKDGQAML 241 (340)
T ss_dssp EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTCEEEE
T ss_pred EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEE--EeCCCeEEE
Confidence 66677889999999999875 4677777 699999999987654433221 2289999999999 789999999
Q ss_pred EeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc----------cccccCCcceEEeecCCC
Q psy14511 390 WEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR----------KARQVGSGSSLEFAILKQ 459 (488)
Q Consensus 390 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~----------~~~~~~~v~~~~~s~~~~ 459 (488)
||+.+.+.+..+..+ ..|.+++|+|++.++ +++.|+.|++||+.++.... ...|...|.+++|+|+++
T Consensus 242 wd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~ 319 (340)
T 4aow_A 242 WDLNEGKHLYTLDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ 319 (340)
T ss_dssp EETTTTEEEEEEECS-SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS
T ss_pred EEeccCceeeeecCC-ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC
Confidence 999999998888754 679999999987655 56679999999998765432 235778899999999998
Q ss_pred ceEEEEeeecccccceeeEEEEeecccc
Q psy14511 460 PVSLTALLRSRAVEKQQHAIAYTVFGEA 487 (488)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~i~~~~~g~~ 487 (488)
.+ +.++.|..+.||..++|.+
T Consensus 320 ~l-------~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 320 TL-------FAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EE-------EEEETTSCEEEEEEEC---
T ss_pred EE-------EEEeCCCEEEEEeCCCcCC
Confidence 76 4567888999999999975
No 85
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.1e-37 Score=286.07 Aligned_cols=275 Identities=17% Similarity=0.229 Sum_probs=200.8
Q ss_pred CCceEEEeecCCeEEEEEcccCcccc-eeecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYP-TAITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~-~~~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
++++||+|+.||.|+|||+.+++... ..+.+|.+.|++|+|+| ++++|++++ |++|++||+++.. ...+.....+.
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~ 209 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTIN 209 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCS
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCC
Confidence 67899999999999999998776432 33568999999999998 789999998 9999999997532 22222233345
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
..+.+++|+|+++++++++. |+.|++||++. +.+..+..+...
T Consensus 210 ~~~~~~~~~~~~~~l~~g~~---dg~i~~wd~~~-~~~~~~~~h~~~--------------------------------- 252 (435)
T 4e54_B 210 IWFCSLDVSASSRMVVTGDN---VGNVILLNMDG-KELWNLRMHKKK--------------------------------- 252 (435)
T ss_dssp CCCCCEEEETTTTEEEEECS---SSBEEEEESSS-CBCCCSBCCSSC---------------------------------
T ss_pred ccEEEEEECCCCCEEEEEeC---CCcEeeeccCc-ceeEEEecccce---------------------------------
Confidence 57889999999987776665 99999999853 444444433222
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--C-cEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--H-DTLAVALDTSVYTWNTKTNKTQLLVEYP 237 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~d~~v~iw~~~~~~~~~~~~~~ 237 (488)
+.++.|++ . .+++++.|+.|++||+.+.+....+...
T Consensus 253 ----------------------------------------v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~ 292 (435)
T 4e54_B 253 ----------------------------------------VTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYS 292 (435)
T ss_dssp ----------------------------------------EEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBC
T ss_pred ----------------------------------------EEeeeecCCCceEEEEecCcceeeEEecccccccceEEEe
Confidence 22233332 3 3556779999999999887654333322
Q ss_pred CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc------EEEEEe--cCCEEEEee--------
Q psy14511 238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ------VIAMCW--NGNLLSCGT-------- 301 (488)
Q Consensus 238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~------v~~~~~--~~~~l~~~~-------- 301 (488)
..|...|++++|+|++++|+++ +.|+.|++||+.++.....+..|... +....| ++..++++.
T Consensus 293 ~~h~~~v~~~~~spdg~~l~s~-~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 371 (435)
T 4e54_B 293 LPHRHPVNAACFSPDGARLLTT-DQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKS 371 (435)
T ss_dssp CBCSSCEEECCBCTTSSEEEEE-ESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCC
T ss_pred eeccccccceeECCCCCeeEEE-cCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEE
Confidence 2288999999999999999999 99999999999988777666544321 122223 344444432
Q ss_pred ----cCCeEEEEECcCCCccceeeecCCccEEEE-EEccCCcEEEEEecCeEEEEECCCCC
Q psy14511 302 ----IGGNILHYDVRTHSDYPTAITREGDVVCGL-KWSPNGRYLASGSNNTVKIWDFRQLD 357 (488)
Q Consensus 302 ----~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~d~~i~iwd~~~~~ 357 (488)
.++.|++||..+++.......+|...|.++ +|+|+|++|++++|+.|+|||+++++
T Consensus 372 ~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk 432 (435)
T 4e54_B 372 CTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEAR 432 (435)
T ss_dssp SSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC---
T ss_pred EEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCe
Confidence 346799999998764444456788888887 69999999999989999999998764
No 86
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-35 Score=265.55 Aligned_cols=281 Identities=12% Similarity=0.126 Sum_probs=224.2
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
+.||++||+|+.||.|+|||+.+++.+ ..+.+|...|.+++|+|++++|++++ |+.|++||+.+++.. ..+. |.
T Consensus 41 s~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~-~~ 115 (369)
T 3zwl_B 41 NKEGDLLFSCSKDSSASVWYSLNGERL-GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV---ATWK-SP 115 (369)
T ss_dssp CTTSCEEEEEESSSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE---EEEE-CS
T ss_pred cCCCCEEEEEeCCCEEEEEeCCCchhh-hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE---EEee-cC
Confidence 348999999999999999999988744 67889999999999999999999998 999999999875433 3333 78
Q ss_pred cceeEEEEecCCCeEEeeeCCccc-----ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICD-----QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (488)
..|.+++|+|+++++++++. + +.|++||+..+.....+........
T Consensus 116 ~~v~~~~~~~~~~~l~~~~~---~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~-------------------------- 166 (369)
T 3zwl_B 116 VPVKRVEFSPCGNYFLAILD---NVMKNPGSINIYEIERDSATHELTKVSEEPI-------------------------- 166 (369)
T ss_dssp SCEEEEEECTTSSEEEEEEC---CBTTBCCEEEEEEEEECTTTCCEEEECSSCS--------------------------
T ss_pred CCeEEEEEccCCCEEEEecC---CccCCCCEEEEEEecCCccceeeccccccee--------------------------
Confidence 89999999999998888776 7 9999999976654332221100000
Q ss_pred cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeEEEEECCC-CceEE
Q psy14511 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKT-NKTQL 232 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~-~~~~~ 232 (488)
.... .......+..+.|+ +..+++++.++.|++||+.+ .+...
T Consensus 167 --------------------------------~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 212 (369)
T 3zwl_B 167 --------------------------------HKII--THEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVD 212 (369)
T ss_dssp --------------------------------EEEE--CCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEE
T ss_pred --------------------------------eecc--CCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEE
Confidence 0000 00001123334443 35677788999999999998 55555
Q ss_pred EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCC------
Q psy14511 233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGG------ 304 (488)
Q Consensus 233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg------ 304 (488)
.+.. |...|.+++|+|++++|+++ +.|+.|++||+++++.+..+. +...+.+++| +++++++++.++
T Consensus 213 ~~~~---~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 287 (369)
T 3zwl_B 213 SIDL---HEKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTT 287 (369)
T ss_dssp EEEC---CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC------
T ss_pred EEec---CCCceeEEEECCCCCEEEEe-cCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEE
Confidence 5544 78899999999999999999 999999999999998888886 7788899998 789999999888
Q ss_pred --------eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511 305 --------NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQL 356 (488)
Q Consensus 305 --------~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~ 356 (488)
.+++||+.+. .....+..|...|.+++|+|++++|++++ |+.|++|++++.
T Consensus 288 ~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 288 TSANEGKFEARFYHKIFE-EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp -------CEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred EecCCCcceeEEEecCCC-cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 8999999886 46778889999999999999999999999 699999999865
No 87
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.6e-35 Score=271.78 Aligned_cols=267 Identities=16% Similarity=0.215 Sum_probs=207.7
Q ss_pred cCC-ceEEEeecCCeEEEEEcccCccccee-ecccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511 3 WNG-NLLSCGTIGGNILHYDVRTHSDYPTA-ITREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC 78 (488)
Q Consensus 3 ~dg-~~la~g~~dg~i~iwd~~~~~~~~~~-~~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~ 78 (488)
.+| ++||+|+.||.|+|||+.+++..... ..+|...|.+++|+| ++++|++++ |+.|++||+.+ .....+....+
T Consensus 83 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~ 161 (383)
T 3ei3_B 83 PTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDS 161 (383)
T ss_dssp SSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCC
T ss_pred CCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCC
Confidence 367 89999999999999999987754332 237999999999999 789999998 99999999985 32333333345
Q ss_pred cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV 158 (488)
Q Consensus 79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (488)
|...|.+++|+|+++++++++. |+.|++||+ +++.+..+..+...+.
T Consensus 162 ~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~-~~~~~~~~~~h~~~v~----------------------------- 208 (383)
T 3ei3_B 162 WDYWYCCVDVSVSRQMLATGDS---TGRLLLLGL-DGHEIFKEKLHKAKVT----------------------------- 208 (383)
T ss_dssp SSCCEEEEEEETTTTEEEEEET---TSEEEEEET-TSCEEEEEECSSSCEE-----------------------------
T ss_pred CCCCeEEEEECCCCCEEEEECC---CCCEEEEEC-CCCEEEEeccCCCcEE-----------------------------
Confidence 6688999999999998777776 999999998 5666666655433222
Q ss_pred eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--C-cEEEEECCCeEEEEECCC----CceE
Q psy14511 159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--H-DTLAVALDTSVYTWNTKT----NKTQ 231 (488)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~d~~v~iw~~~~----~~~~ 231 (488)
++.|++ . .+++++.|+.|++||+.+ +...
T Consensus 209 --------------------------------------------~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 244 (383)
T 3ei3_B 209 --------------------------------------------HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 244 (383)
T ss_dssp --------------------------------------------EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE
T ss_pred --------------------------------------------EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE
Confidence 233333 2 477788999999999997 4454
Q ss_pred EEEecCCCCCCceEEEEEcC-CCCeEEEEeCCCCcEEEEECCcceeeeeecccc-----------------ccEEEEEe-
Q psy14511 232 LLVEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-----------------HQVIAMCW- 292 (488)
Q Consensus 232 ~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----------------~~v~~~~~- 292 (488)
.... |...|.+++|+| ++++++++ +.|+.|++||+++++....+..|. ..+..+.+
T Consensus 245 ~~~~----~~~~v~~~~~s~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s 319 (383)
T 3ei3_B 245 AEMP----HEKPVNAAYFNPTDSTKLLTT-DQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRY 319 (383)
T ss_dssp EEEE----CSSCEEEEEECTTTSCEEEEE-ESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECB
T ss_pred EEec----CCCceEEEEEcCCCCCEEEEE-cCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEec
Confidence 4442 888999999999 99999999 899999999999887766665443 23344555
Q ss_pred -cCCEEEEeecCCeEEEEECcCCCccceeeec--CCccEEEEEEccCCcEEEEEecCeEEEEECCC
Q psy14511 293 -NGNLLSCGTIGGNILHYDVRTHSDYPTAITR--EGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ 355 (488)
Q Consensus 293 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~ 355 (488)
++++ +++.|+.|++||+.+++ ....+.. |...+..++|+|++++|++++|+.|++||+++
T Consensus 320 ~dg~~--s~s~d~~i~iwd~~~~~-~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 320 PDDQL--LLNDKRTIDIYDANSGG-LVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp CCTTT--CTTCCCCEEEEETTTCC-EEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred CCccc--ccCCCCeEEEEecCCCc-eeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 4555 77899999999998864 5556655 56777888999999999999999999999874
No 88
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8e-35 Score=287.51 Aligned_cols=268 Identities=19% Similarity=0.335 Sum_probs=206.3
Q ss_pred CCceEEEeecCCeEEEEEcccCcc----cceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSD----YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQC 78 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~----~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~ 78 (488)
++++|++|+.||+|+|||+.+... ....+.+|...|.+++|+|++++|++|+ |+.|+|||+.++. ....+.+
T Consensus 394 ~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~---~~~~~~~ 470 (694)
T 3dm0_A 394 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV---STRRFVG 470 (694)
T ss_dssp CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEEC
T ss_pred CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc---ceeEEeC
Confidence 468999999999999999986532 2346789999999999999999999999 9999999998744 3445778
Q ss_pred cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV 158 (488)
Q Consensus 79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (488)
|...|.+++|+|+++++++++. |++|++||+.............
T Consensus 471 h~~~v~~~~~s~~~~~l~s~s~---D~~i~iwd~~~~~~~~~~~~~~--------------------------------- 514 (694)
T 3dm0_A 471 HTKDVLSVAFSLDNRQIVSASR---DRTIKLWNTLGECKYTISEGGE--------------------------------- 514 (694)
T ss_dssp CSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSSTT---------------------------------
T ss_pred CCCCEEEEEEeCCCCEEEEEeC---CCEEEEEECCCCcceeeccCCC---------------------------------
Confidence 9999999999999998888776 9999999975443221111000
Q ss_pred eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC----CcEEEEECCCeEEEEECCCCceEEEE
Q psy14511 159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY----HDTLAVALDTSVYTWNTKTNKTQLLV 234 (488)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~v~iw~~~~~~~~~~~ 234 (488)
.....+.++.|++ ..+++++.|+.|++||+.+++....+
T Consensus 515 -------------------------------------~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 557 (694)
T 3dm0_A 515 -------------------------------------GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL 557 (694)
T ss_dssp -------------------------------------SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred -------------------------------------CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE
Confidence 0011233344443 24788889999999999998876655
Q ss_pred ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511 235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR 312 (488)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 312 (488)
. + |...|++++|+|++++++++ +.|+.|++||+.+++.+..+.. ...+.+++| ++.++++ +.++.|++||++
T Consensus 558 ~--~-h~~~v~~v~~spdg~~l~sg-~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~-~~~~~i~iwd~~ 631 (694)
T 3dm0_A 558 A--G-HTGYVSTVAVSPDGSLCASG-GKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCA-ATEHGIKIWDLE 631 (694)
T ss_dssp C--C-CSSCEEEEEECTTSSEEEEE-ETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEE-EETTEEEEEETT
T ss_pred c--C-CCCCEEEEEEeCCCCEEEEE-eCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEE-EcCCCEEEEECC
Confidence 4 3 88999999999999999999 9999999999999998887764 567999999 4555554 556779999998
Q ss_pred CCCccceeeecC-------------------CccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511 313 THSDYPTAITRE-------------------GDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354 (488)
Q Consensus 313 ~~~~~~~~~~~~-------------------~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~ 354 (488)
+.. ....+..+ ...+.+++|+|+|++|++++ ||.|++||+.
T Consensus 632 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 632 SKS-IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp TTE-EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCC-ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 753 33222211 12367889999999999988 6999999875
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=270.18 Aligned_cols=285 Identities=14% Similarity=0.214 Sum_probs=228.4
Q ss_pred ceeecccCceEEEEEEccC---CcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCccc
Q psy14511 29 PTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD 104 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~---g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d 104 (488)
...+.+|.+.|++++|+|+ |++|++|+ |+.|++||+.+.. ......+.+|...|.+++|+|++++|++++. |
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d 107 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-QTIPKAQQMHTGPVLDVCWSDDGSKVFTASC---D 107 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-CEEEEEEEECSSCEEEEEECTTSSEEEEEET---T
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-ceeEEEeccccCCEEEEEECcCCCEEEEEcC---C
Confidence 3567899999999999999 69999998 9999999998622 2222456789999999999999998887776 9
Q ss_pred ceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511 105 QTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA 184 (488)
Q Consensus 105 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
+.|++||+.+++...
T Consensus 108 g~v~iwd~~~~~~~~----------------------------------------------------------------- 122 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQ----------------------------------------------------------------- 122 (368)
T ss_dssp SEEEEEETTTTEEEE-----------------------------------------------------------------
T ss_pred CcEEEEEcCCCCcee-----------------------------------------------------------------
Confidence 999999998765321
Q ss_pred CCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEE--cCCCCeEEEEeCC
Q psy14511 185 KPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW--KPRTTDLAVTNTC 262 (488)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~~ 262 (488)
.. . |...|.+++| +|++++++++ +.
T Consensus 123 ------------------------------------------------~~---~-~~~~v~~~~~~~~~~~~~l~~~-~~ 149 (368)
T 3mmy_A 123 ------------------------------------------------IA---Q-HDAPVKTIHWIKAPNYSCVMTG-SW 149 (368)
T ss_dssp ------------------------------------------------EE---E-CSSCEEEEEEEECSSCEEEEEE-ET
T ss_pred ------------------------------------------------ec---c-ccCceEEEEEEeCCCCCEEEEc-cC
Confidence 00 1 7788999999 8999999998 99
Q ss_pred CCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceee-ecCCccEEEEEEccCCcE--
Q psy14511 263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAI-TREGDVVCGLKWSPNGRY-- 339 (488)
Q Consensus 263 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~-- 339 (488)
|+.|++||+++++.+..+..+. .+.++.+.+..+++++.++.+++|+++......... ..+...+..+++.++...
T Consensus 150 dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (368)
T 3mmy_A 150 DKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP 228 (368)
T ss_dssp TSEEEEECSSCSSCSEEEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE
T ss_pred CCcEEEEECCCCcEEEEEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC
Confidence 9999999999998888887654 778888888899999999999999998754333222 223344666666665543
Q ss_pred --EEEEe-cCeEEEEECCCCCC---Ccccc-----------------eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcc
Q psy14511 340 --LASGS-NNTVKIWDFRQLDA---KRPLG-----------------LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH 396 (488)
Q Consensus 340 --l~~~~-d~~i~iwd~~~~~~---~~~~~-----------------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~ 396 (488)
+++++ |+.+++||++.... ...+. ....+|+|+++++++ ++.||.|++||+.+++
T Consensus 229 ~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s--~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 229 TGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLAT--VGSDGRFSFWDKDART 306 (368)
T ss_dssp EEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEE--EETTSCEEEEETTTTE
T ss_pred CeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEE--EccCCeEEEEECCCCc
Confidence 88888 69999999987632 11111 112289999999999 7899999999999999
Q ss_pred eeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511 397 LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 397 ~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
++..+.+|..+|++++|+|++++|++++.|+..+.|++...+
T Consensus 307 ~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 307 KLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQ 348 (368)
T ss_dssp EEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTT
T ss_pred EEEEecCCCCCceEEEECCCCCeEEEEecccccccccccCCC
Confidence 999999999999999999999999999999876666655443
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-36 Score=283.08 Aligned_cols=220 Identities=11% Similarity=0.064 Sum_probs=179.4
Q ss_pred CCCceEEEEEcCC------CCeEEEEeCCCCcEEEEECCccee-----------eeeeccccccEEEEEe-cCCEEEEee
Q psy14511 240 DNAYISCVAWKPR------TTDLAVTNTCTEYIDLWHEQEERL-----------IQKLRTHMHQVIAMCW-NGNLLSCGT 301 (488)
Q Consensus 240 ~~~~i~~~~~~~~------~~~l~~~~~~~~~i~i~d~~~~~~-----------~~~~~~~~~~v~~~~~-~~~~l~~~~ 301 (488)
+...|.+++|+|+ +.+|+++ +.||+|++||+..+.. ...+.+|...|.+++| .+..|++|+
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~-s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs 284 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFV-SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGF 284 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEE-ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEE
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEE-ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 6678999999997 4688888 9999999999976532 2356789999999999 567999999
Q ss_pred cCCeEEEEECcCCCccceeeecCCccEEEE--EEccCC-cEEEEEe-cCeEEEEECCCCCCCcccce-------eeeeec
Q psy14511 302 IGGNILHYDVRTHSDYPTAITREGDVVCGL--KWSPNG-RYLASGS-NNTVKIWDFRQLDAKRPLGL-------IVPKLK 370 (488)
Q Consensus 302 ~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~--~~s~~~-~~l~~~~-d~~i~iwd~~~~~~~~~~~~-------~~~~~~ 370 (488)
.||.|++||++++..+...+..|...|.++ +|+|++ ++||+++ |++|+|||+++.+....+.. ...+|+
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs 364 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC 364 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE
T ss_pred CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeC
Confidence 999999999997655666788999999999 578888 8999999 79999999987644332211 123899
Q ss_pred CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc-----c
Q psy14511 371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR-----Q 445 (488)
Q Consensus 371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~-----~ 445 (488)
|+++.+++ ++.|++|++||++++.++.++.+|.+.|++++|||++++|++|+.||+|++||+..+....... +
T Consensus 365 p~~~~l~s--~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~ 442 (524)
T 2j04_B 365 PQIYSYIY--SDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQK 442 (524)
T ss_dssp TTTTEEEE--ECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CC
T ss_pred CCcCeEEE--eCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCcccee
Confidence 99999888 6889999999999999888999999999999999999999999999999999987642222111 1
Q ss_pred cCCcceEEeecCCCceE
Q psy14511 446 VGSGSSLEFAILKQPVS 462 (488)
Q Consensus 446 ~~~v~~~~~s~~~~~~~ 462 (488)
...+.+++|+|+++.+.
T Consensus 443 ~~~v~~v~~sp~g~~~~ 459 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYR 459 (524)
T ss_dssp CCEEEECBCCSSSCEEE
T ss_pred eeEEEEeccCCCCCeEE
Confidence 12356899999887543
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.2e-35 Score=256.97 Aligned_cols=235 Identities=18% Similarity=0.335 Sum_probs=187.3
Q ss_pred ccCCceEEEeecCCeEEEEEcccCc-ccceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHS-DYPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ 77 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~-~~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~ 77 (488)
++||++||+|+.|++|+|||+.... .....+.+|.++|.+++|+| ++++||+|+ |++|+|||+++++. ..+..+.
T Consensus 18 s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~-~~~~~~~ 96 (297)
T 2pm7_B 18 DYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW-SQIAVHA 96 (297)
T ss_dssp CTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB-CCCEEEC
T ss_pred CCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce-EEEEEee
Confidence 5689999999999999999997542 24467899999999999986 489999998 99999999986542 2344567
Q ss_pred ccccceeEEEEecC--CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511 78 CHLSAVKAIAWCPW--EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155 (488)
Q Consensus 78 ~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (488)
+|...|.+++|+|+ ++++++++. |++|++||+.++.....
T Consensus 97 ~h~~~v~~v~~~p~~~g~~l~s~s~---d~~v~~wd~~~~~~~~~----------------------------------- 138 (297)
T 2pm7_B 97 VHSASVNSVQWAPHEYGPMLLVASS---DGKVSVVEFKENGTTSP----------------------------------- 138 (297)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEEBCSSSCBCC-----------------------------------
T ss_pred cCCCceeEEEeCcCCCCcEEEEEEC---CCcEEEEEecCCCceee-----------------------------------
Confidence 89999999999998 777666665 99999999875431000
Q ss_pred cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE 235 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~ 235 (488)
. .
T Consensus 139 ----------------------------------------------------------------------------~--~ 140 (297)
T 2pm7_B 139 ----------------------------------------------------------------------------I--I 140 (297)
T ss_dssp ----------------------------------------------------------------------------E--E
T ss_pred ----------------------------------------------------------------------------e--e
Confidence 0 0
Q ss_pred cCCCCCCceEEEEEcCC-------------CCeEEEEeCCCCcEEEEECCcce----eeeeeccccccEEEEEec-----
Q psy14511 236 YPTYDNAYISCVAWKPR-------------TTDLAVTNTCTEYIDLWHEQEER----LIQKLRTHMHQVIAMCWN----- 293 (488)
Q Consensus 236 ~~~~~~~~i~~~~~~~~-------------~~~l~~~~~~~~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~----- 293 (488)
+.+ |...+.+++|+|+ +++|+++ +.|+.|++||+++++ ....+.+|...|.+++|+
T Consensus 141 ~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sg-s~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~ 218 (297)
T 2pm7_B 141 IDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (297)
T ss_dssp EEC-CSSCEEEEEECCCC------------CCEEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred eec-ccCccceEeecCCcccccccCCCCCCcceEEEE-cCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCC
Confidence 111 6667888888876 4688888 999999999987754 566788999999999993
Q ss_pred CCEEEEeecCCeEEEEECcCCCcc--ceee--ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511 294 GNLLSCGTIGGNILHYDVRTHSDY--PTAI--TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ 355 (488)
Q Consensus 294 ~~~l~~~~~dg~i~i~d~~~~~~~--~~~~--~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~ 355 (488)
+++|++++.|+.|++||++..... ...+ ..|...|.+++|+|++++||+++ |+.|++|+...
T Consensus 219 ~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 219 RSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred ceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 378999999999999999864321 1222 46778899999999999999998 69999999763
No 92
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.1e-35 Score=266.60 Aligned_cols=276 Identities=15% Similarity=0.123 Sum_probs=206.6
Q ss_pred ccCCceEEEeecC-------CeEEEEEcccCcccc---------eeecccCceEEEEEEccCCcEEEEe-----------
Q psy14511 2 CWNGNLLSCGTIG-------GNILHYDVRTHSDYP---------TAITREGDVVCGLKWSPNGRYLASG----------- 54 (488)
Q Consensus 2 ~~dg~~la~g~~d-------g~i~iwd~~~~~~~~---------~~~~~h~~~V~~l~~sp~g~~las~----------- 54 (488)
+.||++||+|+.+ +.|++|++....... ..+.+|...|.+++++ ++.+++|
T Consensus 23 s~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~ 100 (365)
T 4h5i_A 23 LNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENSTKITQG 100 (365)
T ss_dssp EETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHT
T ss_pred eCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCccEEEEe
Confidence 3489999998753 369999987654321 1356788888887765 4555543
Q ss_pred c-CCeEEEEeccccCcCC------CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCc
Q psy14511 55 S-NNTVKIWDFRQLDAKR------PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQ 127 (488)
Q Consensus 55 ~-d~~i~vwd~~~~~~~~------~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 127 (488)
+ |+.+++|++.+..... .......+...+.+++|+|||++++++++ +.|++|++||+.+++++..+... ..
T Consensus 101 ~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~-~~d~~i~iwd~~~~~~~~~~~~~-~~ 178 (365)
T 4h5i_A 101 KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASS-KVPAIMRIIDPSDLTEKFEIETR-GE 178 (365)
T ss_dssp SCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEES-CSSCEEEEEETTTTEEEEEEECS-SC
T ss_pred cCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEEC-CCCCEEEEeECCCCcEEEEeCCC-Cc
Confidence 3 7889999987543211 11112334566899999999998765432 14899999999999887766432 22
Q ss_pred cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC
Q psy14511 128 ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG 207 (488)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (488)
+.. +.|+
T Consensus 179 V~~-------------------------------------------------------------------------v~fs 185 (365)
T 4h5i_A 179 VKD-------------------------------------------------------------------------LHFS 185 (365)
T ss_dssp CCE-------------------------------------------------------------------------EEEC
T ss_pred eEE-------------------------------------------------------------------------EEEc
Confidence 222 3343
Q ss_pred C-CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC----cEEEEECCccee----ee
Q psy14511 208 Y-HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE----YIDLWHEQEERL----IQ 278 (488)
Q Consensus 208 ~-~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----~i~i~d~~~~~~----~~ 278 (488)
+ +.+++.+.++.+++|+..+++......... |...+.+++|+|+++.++++ +.++ .+++|++..... ..
T Consensus 186 pdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~fspdg~~l~~~-s~d~~~~~~i~~~~~~~~~~~~~~~~ 263 (365)
T 4h5i_A 186 TDGKVVAYITGSSLEVISTVTGSCIARKTDFD-KNWSLSKINFIADDTVLIAA-SLKKGKGIVLTKISIKSGNTSVLRSK 263 (365)
T ss_dssp TTSSEEEEECSSCEEEEETTTCCEEEEECCCC-TTEEEEEEEEEETTEEEEEE-EESSSCCEEEEEEEEETTEEEEEEEE
T ss_pred cCCceEEeccceeEEEEEeccCcceeeeecCC-CCCCEEEEEEcCCCCEEEEE-ecCCcceeEEeecccccceecceeee
Confidence 3 466777778889999988888766655555 88899999999999999998 6665 688888766433 34
Q ss_pred eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511 279 KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ 355 (488)
Q Consensus 279 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~ 355 (488)
.+.+|...|.+++| ++++|++|+.|+.|++||+++++.....+.+|..+|++++|+|||++||+++ |++|+|||+..
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 56789999999999 7999999999999999999986543344678999999999999999999999 69999999964
Q ss_pred C
Q psy14511 356 L 356 (488)
Q Consensus 356 ~ 356 (488)
.
T Consensus 344 ~ 344 (365)
T 4h5i_A 344 N 344 (365)
T ss_dssp T
T ss_pred C
Confidence 3
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6e-35 Score=272.34 Aligned_cols=264 Identities=18% Similarity=0.299 Sum_probs=216.5
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHL 80 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~ 80 (488)
.+||++|++|+.||.|++||+.+++.. ..+.+|.+.|.+++| ++++|++|+ |+.|++||+.+++ .+..+.+|.
T Consensus 140 ~~d~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~ 213 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTLECK-RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE---MLNTLIHHC 213 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSCCEE-EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC---EEEEECCCC
T ss_pred EECCCEEEEEeCCCeEEEEeCCCCeEE-EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc---EEEEEcCCC
Confidence 458999999999999999999988744 668899999999999 789999998 9999999998754 455577899
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeee---eeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC---HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK 157 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (488)
..|.+++|++ ..+++++. |+.|++||+.++.... .+..+.
T Consensus 214 ~~v~~l~~~~--~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~-------------------------------- 256 (435)
T 1p22_A 214 EAVLHLRFNN--GMMVTCSK---DRSIAVWDMASPTDITLRRVLVGHR-------------------------------- 256 (435)
T ss_dssp SCEEEEECCT--TEEEEEET---TSCEEEEECSSSSCCEEEEEECCCS--------------------------------
T ss_pred CcEEEEEEcC--CEEEEeeC---CCcEEEEeCCCCCCceeeeEecCCC--------------------------------
Confidence 9999999974 36666665 9999999998776432 111111
Q ss_pred eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511 158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP 237 (488)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~ 237 (488)
..+..+.++++.+++++.|+.|++||+.+++....+..
T Consensus 257 -----------------------------------------~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~- 294 (435)
T 1p22_A 257 -----------------------------------------AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG- 294 (435)
T ss_dssp -----------------------------------------SCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC-
T ss_pred -----------------------------------------CcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcC-
Confidence 12333455567788899999999999999988776654
Q ss_pred CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCc-
Q psy14511 238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSD- 316 (488)
Q Consensus 238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~- 316 (488)
|...+.+++++ ++.++++ +.||.|++||+++++++..+.+|...+.+++++++.+++|+.||.|++||+.+...
T Consensus 295 --~~~~v~~~~~~--~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 369 (435)
T 1p22_A 295 --HKRGIACLQYR--DRLVVSG-SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDP 369 (435)
T ss_dssp --CSSCEEEEEEE--TTEEEEE-ETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTST
T ss_pred --CCCcEEEEEeC--CCEEEEE-eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCc
Confidence 88899999994 6788888 99999999999999999999999999999999999999999999999999976431
Q ss_pred -------cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC
Q psy14511 317 -------YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD 357 (488)
Q Consensus 317 -------~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~ 357 (488)
....+..|...|.+++| ++++|++++ ||.|++||+.+..
T Consensus 370 ~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 370 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp TSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred cccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 46677889999999999 778899888 6999999987653
No 94
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-34 Score=263.47 Aligned_cols=288 Identities=16% Similarity=0.160 Sum_probs=225.1
Q ss_pred cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe--eeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511 77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK--EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID 154 (488)
Q Consensus 77 ~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (488)
..|.++|.+++|+|+++++++++. |+.|++||+.+++ ....+..+...+..+.+.+
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~------------------- 62 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPN---NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP------------------- 62 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECS---SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-------------------
T ss_pred cccCCCeEEEEECCCCCEEEEEeC---CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-------------------
Confidence 448899999999999988777666 9999999998886 5555555433222222211
Q ss_pred ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511 155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV 234 (488)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~ 234 (488)
.+..+++++.|+.|++||+.+++.....
T Consensus 63 ----------------------------------------------------~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 63 ----------------------------------------------------DSNRIVTCGTDRNAYVWTLKGRTWKPTL 90 (372)
T ss_dssp ----------------------------------------------------TTTEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred ----------------------------------------------------CCCEEEEEcCCCeEEEEECCCCeeeeeE
Confidence 2346778889999999999998877776
Q ss_pred ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee----eeeeccccccEEEEEe--cCCEEEEeecCCeEEE
Q psy14511 235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL----IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILH 308 (488)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i 308 (488)
.... +...+.+++|+|++++++++ +.++.|++||++.+.. ......|...+.+++| +++++++++.||.|++
T Consensus 91 ~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 91 VILR-INRAARCVRWAPNEKKFAVG-SGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp ECCC-CSSCEEEEEECTTSSEEEEE-ETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred Eeec-CCCceeEEEECCCCCEEEEE-eCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 6666 88899999999999999999 8999999999987652 2333678999999999 6889999999999999
Q ss_pred EECcC-----------------CCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeec
Q psy14511 309 YDVRT-----------------HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLK 370 (488)
Q Consensus 309 ~d~~~-----------------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~ 370 (488)
||++. .......+..|...|.+++|+|++++|++++ |+.|++||+
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~----------------- 231 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA----------------- 231 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG-----------------
T ss_pred EEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC-----------------
Confidence 99742 1245566778888999999999999888886 355555554
Q ss_pred CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCC--CCc---------
Q psy14511 371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFP--RDK--------- 439 (488)
Q Consensus 371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~--~~~--------- 439 (488)
.+++++..+..|..+|.+++|+|++++|+++ .|+.|++|++.+ ++.
T Consensus 232 ----------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~ 288 (372)
T 1k8k_C 232 ----------------------DKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVP 288 (372)
T ss_dssp ----------------------GGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC
T ss_pred ----------------------CCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCcc
Confidence 4456677888899999999999999988888 899999999988 420
Q ss_pred ------------------------------ccc-ccccCCcceEEee-cCC---CceEEEEeeecccccceeeEEEEeec
Q psy14511 440 ------------------------------KRK-ARQVGSGSSLEFA-ILK---QPVSLTALLRSRAVEKQQHAIAYTVF 484 (488)
Q Consensus 440 ------------------------------~~~-~~~~~~v~~~~~s-~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~ 484 (488)
... ..|...|.+++|. +++ ..+ ..++.|..+.+|...+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l-------~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 289 KQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQF-------CTTGMDGGMSIWDVRS 361 (372)
T ss_dssp --------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEE-------EEEETTSEEEEEEHHH
T ss_pred ccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeE-------EEecCCCceEEEEecC
Confidence 112 3788999999976 554 555 4567888899998877
Q ss_pred ccc
Q psy14511 485 GEA 487 (488)
Q Consensus 485 g~~ 487 (488)
++.
T Consensus 362 ~~~ 364 (372)
T 1k8k_C 362 LES 364 (372)
T ss_dssp HHH
T ss_pred hhH
Confidence 653
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9e-36 Score=273.00 Aligned_cols=250 Identities=15% Similarity=0.190 Sum_probs=191.3
Q ss_pred eecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511 31 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL 109 (488)
Q Consensus 31 ~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v 109 (488)
....|.++|++++|+|+|++||+++ |+.|++||+.++. ...+..+.+|...|.+++|+|++++|++++. |++|++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---d~~v~v 81 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG-WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ---DRNAYV 81 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE-EEECCCBCCCSSCEEEEEECTTTCCEEEEET---TSSEEE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc-eEEEEEEecCCceEEEEEEeCCCCEEEEEeC---CCeEEE
Confidence 3455778999999999999999997 9999999998642 1345557789999999999999988887776 999999
Q ss_pred EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511 110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI 189 (488)
Q Consensus 110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (488)
||+.+++...
T Consensus 82 wd~~~~~~~~---------------------------------------------------------------------- 91 (377)
T 3dwl_C 82 YEKRPDGTWK---------------------------------------------------------------------- 91 (377)
T ss_dssp C------CCC----------------------------------------------------------------------
T ss_pred EEcCCCCcee----------------------------------------------------------------------
Confidence 9997654100
Q ss_pred ecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE
Q psy14511 190 LEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW 269 (488)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~ 269 (488)
....+.+ |...|.+++|+|++++|+++ +.|+.|++|
T Consensus 92 ------------------------------------------~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw 127 (377)
T 3dwl_C 92 ------------------------------------------QTLVLLR-LNRAATFVRWSPNEDKFAVG-SGARVISVC 127 (377)
T ss_dssp ------------------------------------------CEEECCC-CSSCEEEEECCTTSSCCEEE-ESSSCEEEC
T ss_pred ------------------------------------------eeeEecc-cCCceEEEEECCCCCEEEEE-ecCCeEEEE
Confidence 0111122 77889999999999999999 899999999
Q ss_pred ECCcce---eeeeecc-ccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC-----------------ccceeeecCCc
Q psy14511 270 HEQEER---LIQKLRT-HMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS-----------------DYPTAITREGD 326 (488)
Q Consensus 270 d~~~~~---~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~-----------------~~~~~~~~~~~ 326 (488)
|++.++ ....+.. |...|.+++| ++++|++++.|+.|++||++... .....+ .|..
T Consensus 128 d~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 206 (377)
T 3dwl_C 128 YFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG 206 (377)
T ss_dssp CC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS
T ss_pred EECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc
Confidence 999876 3677777 9999999999 68899999999999999985321 233334 8888
Q ss_pred cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511 327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ 405 (488)
Q Consensus 327 ~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~ 405 (488)
.|.+++|+|++++|++++ |+.|++||+.+.+. ..+.+..+.+|.
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~-----------------------------------~~~~~~~~~~~~ 251 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ-----------------------------------PPRALITVKLSQ 251 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECSTTS-----------------------------------CEEECCCEECSS
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC-----------------------------------cceeeEeecCCC
Confidence 999999999999999887 57777777765411 011255677899
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511 406 ERILSAVLSPDQTCVAAASADETISIWNCF 435 (488)
Q Consensus 406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~ 435 (488)
..|.+++|+|++++|++++.|+.+ +|+..
T Consensus 252 ~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 252 LPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 999999999999999999877666 66665
No 96
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=265.38 Aligned_cols=286 Identities=11% Similarity=0.119 Sum_probs=217.3
Q ss_pred cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511 35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM 113 (488)
Q Consensus 35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~ 113 (488)
-...|.+++|||||+++|+++ |++|+ |... .+. +.+|...|.+++|+|+| . ++.+.+|+.+
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~---~~~---l~gh~~~v~~V~FsPdg-------~---~~~~~~~~~~ 75 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKY---AKD---INCNSKNLFHVKEFPLE-------F---ENKLDFELAQ 75 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECC---CSC---CSSBGGGTEEEEEECCC-------C---CCTTTTSCCC
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccc---cce---ecCCCccEEEEEECCCC-------C---cceEEEEeCC
Confidence 346799999999999999999 99999 6433 322 36899999999999999 3 7777676643
Q ss_pred CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511 114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP 193 (488)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (488)
....
T Consensus 76 ~~~~---------------------------------------------------------------------------- 79 (588)
T 2j04_A 76 QNGL---------------------------------------------------------------------------- 79 (588)
T ss_dssp SSCS----------------------------------------------------------------------------
T ss_pred CceE----------------------------------------------------------------------------
Confidence 2210
Q ss_pred CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511 194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273 (488)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~ 273 (488)
+.. . +...|.+++|+|+|..|+++ +.||.|++||.+.
T Consensus 80 ----------------------------------------~~~-~-~~~~V~~vawSPdG~~LAs~-s~dg~V~iwd~~~ 116 (588)
T 2j04_A 80 ----------------------------------------LNS-Q-PVCYPRVCKPSPIDDWMAVL-SNNGNVSVFKDNK 116 (588)
T ss_dssp ----------------------------------------STT-S-CSCCEEEEEECSSSSCEEEE-ETTSCEEEEETTE
T ss_pred ----------------------------------------eec-C-CCCcEEEEEECCCCCEEEEE-eCCCcEEEEeCCc
Confidence 000 0 56689999999999999999 9999999999654
Q ss_pred ceeeeeeccccc-----cEEEEEe--cCCEEEEeecCCeEEEEECcCCCc------cceee----ecCCccEEEEEEccC
Q psy14511 274 ERLIQKLRTHMH-----QVIAMCW--NGNLLSCGTIGGNILHYDVRTHSD------YPTAI----TREGDVVCGLKWSPN 336 (488)
Q Consensus 274 ~~~~~~~~~~~~-----~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~----~~~~~~i~~~~~s~~ 336 (488)
++..+. |.. .+.+++| ||++|++|+.||.|++||+..+.. ....+ .+|...|.+++|+|+
T Consensus 117 --~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd 193 (588)
T 2j04_A 117 --MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED 193 (588)
T ss_dssp --EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT
T ss_pred --eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC
Confidence 666666 665 4999999 899999999999999999988532 23444 567789999999999
Q ss_pred CcEEEEEecCeEEEEECCCCCCCc---ccc----eeee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecccc
Q psy14511 337 GRYLASGSNNTVKIWDFRQLDAKR---PLG----LIVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQER 407 (488)
Q Consensus 337 ~~~l~~~~d~~i~iwd~~~~~~~~---~~~----~~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~ 407 (488)
| +++++.|+.+++||+....... .+. ..+. +|+ |+.++++ + +++|++||+.+++......+|.+.
T Consensus 194 g-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa--~-~~tIkLWd~~~~~~~~~~~gh~~~ 267 (588)
T 2j04_A 194 V-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLT--C-PGYVHKIDLKNYSISSLKTGSLEN 267 (588)
T ss_dssp E-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEE--C-SSEEEEEETTTTEEEEEECSCCSC
T ss_pred c-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEE--e-CCeEEEEECCCCeEEEEEcCCCce
Confidence 9 5444448999999998776321 121 1122 787 6888884 3 589999999988774444489999
Q ss_pred EEEEEE--cCCCCEEEEEeCCCcEEEEecC-----CCCc------------------cccccccCCcceEEeecCCCceE
Q psy14511 408 ILSAVL--SPDQTCVAAASADETISIWNCF-----PRDK------------------KRKARQVGSGSSLEFAILKQPVS 462 (488)
Q Consensus 408 v~~~~~--s~~~~~l~t~~~dg~v~iw~~~-----~~~~------------------~~~~~~~~~v~~~~~s~~~~~~~ 462 (488)
|.+++| +||+..|++++.||+ ++|..+ +... .........|.+++|||||+.++
T Consensus 268 V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA 346 (588)
T 2j04_A 268 FHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIA 346 (588)
T ss_dssp CCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEE
T ss_pred EEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEE
Confidence 999999 999999999999999 999873 1110 11111233478899999999887
Q ss_pred EEEee
Q psy14511 463 LTALL 467 (488)
Q Consensus 463 ~~~~~ 467 (488)
....+
T Consensus 347 ~~~~i 351 (588)
T 2j04_A 347 IVYDM 351 (588)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 65544
No 97
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.8e-35 Score=261.05 Aligned_cols=232 Identities=22% Similarity=0.373 Sum_probs=181.6
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcc-cceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcCCCccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSD-YPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ 77 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~-~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~ 77 (488)
+.||++||+|+.|++|+|||+.++.. ....+.+|.+.|.+++|+| ++++|++++ |++|++||+++++ ......+.
T Consensus 22 s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~-~~~~~~~~ 100 (316)
T 3bg1_A 22 DYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHA 100 (316)
T ss_dssp CGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC-CCEEEEEC
T ss_pred cCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc-ceEEEEcc
Confidence 45899999999999999999987653 3456889999999999986 489999998 9999999998643 22344567
Q ss_pred ccccceeEEEEecC--CCeEEeeeCCcccceEEEEecCCCeee---eeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511 78 CHLSAVKAIAWCPW--EPTLLATGGGICDQTVRLWNSMNGKEK---CHVKTDSQQANDETISYREQKKRRHLSFLLHGFE 152 (488)
Q Consensus 78 ~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (488)
+|...|.+++|+|+ +.+|++++. |++|++||+..+... ..+..
T Consensus 101 ~h~~~V~~v~~~p~~~g~~lasgs~---D~~i~lwd~~~~~~~~~~~~~~~----------------------------- 148 (316)
T 3bg1_A 101 GHDSSVNSVCWAPHDYGLILACGSS---DGAISLLTYTGEGQWEVKKINNA----------------------------- 148 (316)
T ss_dssp CCSSCCCEEEECCTTTCSCEEEECS---SSCEEEEEECSSSCEEECCBTTS-----------------------------
T ss_pred CCCCceEEEEECCCCCCcEEEEEcC---CCCEEEEecCCCCCcceeeeecc-----------------------------
Confidence 89999999999998 655555554 999999998765321 11111
Q ss_pred ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEE
Q psy14511 153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL 232 (488)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~ 232 (488)
T Consensus 149 -------------------------------------------------------------------------------- 148 (316)
T 3bg1_A 149 -------------------------------------------------------------------------------- 148 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCceEEEEEcC-----------------CCCeEEEEeCCCCcEEEEECCcc---eeeeeeccccccEEEEEe
Q psy14511 233 LVEYPTYDNAYISCVAWKP-----------------RTTDLAVTNTCTEYIDLWHEQEE---RLIQKLRTHMHQVIAMCW 292 (488)
Q Consensus 233 ~~~~~~~~~~~i~~~~~~~-----------------~~~~l~~~~~~~~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~ 292 (488)
|...+.+++|+| ++++|+++ +.|+.|++||++.. +.+..+.+|...|.+++|
T Consensus 149 -------h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-s~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 149 -------HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG-GCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp -------SSSCBCCCEECCCCCC------CCSCCCCCCCBEECC-BTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred -------ccCCcceEEEccccCCccccccccccCccccceEEEe-cCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence 222233333333 25678888 99999999999754 467788899999999999
Q ss_pred --cC----CEEEEeecCCeEEEEECcCCC---ccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511 293 --NG----NLLSCGTIGGNILHYDVRTHS---DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354 (488)
Q Consensus 293 --~~----~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~ 354 (488)
++ ++|++++.|+.|++|+++... .....+..|...|.+++|+|++++||+++ |+.|++|+..
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 33 789999999999999997631 22345677889999999999999999998 6999999976
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.8e-32 Score=251.01 Aligned_cols=327 Identities=13% Similarity=0.100 Sum_probs=243.2
Q ss_pred CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEE-EEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511 5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL-ASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA 82 (488)
Q Consensus 5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~l-as~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~ 82 (488)
+.++++++.|+.|++||+.+++.+ ..+..|. .+.+++|+|+|++| ++++ |+.|++||+.+++.. ..+..+ ..
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~-~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~---~~~~~~-~~ 75 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVT-ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI---ATVPAG-SS 75 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEE-EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE---EEEECS-SS
T ss_pred CEEEEEcCCCCEEEEEECCCCeEE-EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE---EEEECC-CC
Confidence 457889999999999999988744 4566665 48999999999977 5665 999999999875533 233333 48
Q ss_pred eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511 83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS 162 (488)
Q Consensus 83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (488)
+.+++|+|+++++++++.. ++.|++||+.+++.+..+
T Consensus 76 v~~~~~spdg~~l~~~~~~--~~~v~v~d~~~~~~~~~~----------------------------------------- 112 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMA--SSTLSVIDTTSNTVAGTV----------------------------------------- 112 (391)
T ss_dssp EEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEE-----------------------------------------
T ss_pred ccceEECCCCCEEEEEECC--CCEEEEEECCCCeEEEEE-----------------------------------------
Confidence 9999999999998888763 799999999877643221
Q ss_pred cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511 163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA 242 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~ 242 (488)
. +..
T Consensus 113 ------------------------------------------------------------------------~----~~~ 116 (391)
T 1l0q_A 113 ------------------------------------------------------------------------K----TGK 116 (391)
T ss_dssp ------------------------------------------------------------------------E----CSS
T ss_pred ------------------------------------------------------------------------e----CCC
Confidence 1 233
Q ss_pred ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEE-EEeecCCeEEEEECcCCCccce
Q psy14511 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLL-SCGTIGGNILHYDVRTHSDYPT 319 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l-~~~~~dg~i~i~d~~~~~~~~~ 319 (488)
.+.+++|+|+++.++++++.++.|++||+.+++.+..+..+ ..+.+++| +++.+ ++++.++.|++||+++++ ...
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-~~~ 194 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-VID 194 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe-EEE
Confidence 57899999999988655488999999999999888888765 44578888 57766 677889999999998753 333
Q ss_pred eeecCCccEEEEEEccCCcEEEEEe----cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEe
Q psy14511 320 AITREGDVVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWE 391 (488)
Q Consensus 320 ~~~~~~~~i~~~~~s~~~~~l~~~~----d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d 391 (488)
.+. +...+.+++|+|++++|++++ ++.|++||+.+++....+... ..+|+|++++++++ +..++.|++||
T Consensus 195 ~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s-~~~d~~v~v~d 272 (391)
T 1l0q_A 195 TVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA-LSFXNTVSVID 272 (391)
T ss_dssp EEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE-ETTTTEEEEEE
T ss_pred EEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEE-cCCCCEEEEEE
Confidence 333 456789999999999888876 499999999887543333221 22899999988654 67899999999
Q ss_pred CCCcceeEEEeeccccEE---EEEEcC------------CC----------CEEEEEeCCCcEEEEecCCCCcccccccc
Q psy14511 392 YPRLHLIEELKIHQERIL---SAVLSP------------DQ----------TCVAAASADETISIWNCFPRDKKRKARQV 446 (488)
Q Consensus 392 ~~~~~~~~~~~~~~~~v~---~~~~s~------------~~----------~~l~t~~~dg~v~iw~~~~~~~~~~~~~~ 446 (488)
+.+++.+..+..|..+.. .+.+.| +. ..+...+.|..+++|++.++....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~~----- 347 (391)
T 1l0q_A 273 TATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSK----- 347 (391)
T ss_dssp TTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEEC-----
T ss_pred CCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcccC-----
Confidence 999999988887755432 122222 21 345566778999999998876432
Q ss_pred CCcceEEeecCCCceEEEE
Q psy14511 447 GSGSSLEFAILKQPVSLTA 465 (488)
Q Consensus 447 ~~v~~~~~s~~~~~~~~~~ 465 (488)
.......|+++|.+..-..
T Consensus 348 ~~~~~~~~~~~g~y~~~~~ 366 (391)
T 1l0q_A 348 KQNPTHTYSETGIYTVRLT 366 (391)
T ss_dssp SSSCEECCSSCEEEEEEEE
T ss_pred cCCCeEEeCCCceEEEEEE
Confidence 2234477899887654333
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.8e-34 Score=263.53 Aligned_cols=307 Identities=15% Similarity=0.212 Sum_probs=208.5
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceee------------cccCceEEEEEEcc-CCcEEEEec-CCeEEEEeccccCc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAI------------TREGDVVCGLKWSP-NGRYLASGS-NNTVKIWDFRQLDA 69 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~------------~~h~~~V~~l~~sp-~g~~las~~-d~~i~vwd~~~~~~ 69 (488)
||++||+|+.||.|+|||+.++....... .+|...|.+++|+| ++++|++++ |+.|++||+.+++.
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 89999999999999999999877543322 35999999999999 788999998 99999999987543
Q ss_pred CCCcccccccccceeEEEEecCCC---eEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEE
Q psy14511 70 KRPQVNNQCHLSAVKAIAWCPWEP---TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSF 146 (488)
Q Consensus 70 ~~~~~~~~~h~~~v~~l~~~~~~~---~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (488)
.. . ..+...+.++.|+|.+. .+++++. |+.|++||+.+++.+..+..+...+.
T Consensus 135 ~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~d~~~~~~~~~~~~~~~~v~----------------- 190 (408)
T 4a11_B 135 AD---V-FNFEETVYSHHMSPVSTKHCLVAVGTR---GPKVQLCDLKSGSCSHILQGHRQEIL----------------- 190 (408)
T ss_dssp EE---E-EECSSCEEEEEECSSCSSCCEEEEEES---SSSEEEEESSSSCCCEEECCCCSCEE-----------------
T ss_pred ce---e-ccCCCceeeeEeecCCCCCcEEEEEcC---CCeEEEEeCCCcceeeeecCCCCcEE-----------------
Confidence 22 2 23678899999998654 6666665 99999999998887766655433222
Q ss_pred EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--Cc-EEEEECCCeEEEE
Q psy14511 147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HD-TLAVALDTSVYTW 223 (488)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~d~~v~iw 223 (488)
++.|++ .. +++++.|+.|++|
T Consensus 191 --------------------------------------------------------~~~~~~~~~~ll~~~~~dg~i~i~ 214 (408)
T 4a11_B 191 --------------------------------------------------------AVSWSPRYDYILATASADSRVKLW 214 (408)
T ss_dssp --------------------------------------------------------EEEECSSCTTEEEEEETTSCEEEE
T ss_pred --------------------------------------------------------EEEECCCCCcEEEEEcCCCcEEEE
Confidence 233332 33 6678899999999
Q ss_pred ECCCCc-eEEEEec-------------CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-----
Q psy14511 224 NTKTNK-TQLLVEY-------------PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM----- 284 (488)
Q Consensus 224 ~~~~~~-~~~~~~~-------------~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~----- 284 (488)
|+.++. ....+.. .. |...|.+++|+|++++++++ +.|+.|++||+.+++....+..+.
T Consensus 215 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 292 (408)
T 4a11_B 215 DVRRASGCLITLDQHNGKKSQAVESANTA-HNGKVNGLCFTSDGLHLLTV-GTDNRMRLWNSSNGENTLVNYGKVCNNSK 292 (408)
T ss_dssp ETTCSSCCSEECCTTTTCSCCCTTTSSCS-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCBCCCCCCCCCCCCS
T ss_pred ECCCCCcccccccccccccceeecccccc-ccCceeEEEEcCCCCEEEEe-cCCCeEEEEECCCCccceecccccccccc
Confidence 998765 2222210 23 78899999999999999999 999999999999877655443321
Q ss_pred -ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcc
Q psy14511 285 -HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP 361 (488)
Q Consensus 285 -~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~ 361 (488)
........ .+..+++++.++.|++||+.++ .....+.+|...|.+++|+|++++|++++ ||.|++||+.+.+....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 293 KGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG-EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPD 371 (408)
T ss_dssp SCCCCEECCSSSSCEEEEEETTEEEEEETTTC-CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------
T ss_pred ccceeEEecCCCceEEEEecCCEEEEEECcCC-cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCC
Confidence 11122222 4677788889999999999986 46778889999999999999999999999 69999999998865443
Q ss_pred cceee--eeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511 362 LGLIV--PKLKREGRELVTSHGKQDCSLKMWEYPR 394 (488)
Q Consensus 362 ~~~~~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~ 394 (488)
..... ..+.+........ ...++.+++|+.+.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 372 DDETTTKSQLNPAFEDAWSS-SDEEGGTSAWSHPQ 405 (408)
T ss_dssp -----------------------------------
T ss_pred CCceEeccccccccceeecc-cCccCceeecCCcc
Confidence 32221 2444444333333 56789999998764
No 100
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.9e-34 Score=261.11 Aligned_cols=230 Identities=13% Similarity=0.162 Sum_probs=192.4
Q ss_pred CCCceEEEEEcCC----CCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECc
Q psy14511 240 DNAYISCVAWKPR----TTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVR 312 (488)
Q Consensus 240 ~~~~i~~~~~~~~----~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~ 312 (488)
+...|.+++|+|+ +++++++ +.||.|++||+.+++.+..+.+|...|.+++| +++++++++.||.|++||++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVA-GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEE-ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEe-cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 6778999999999 5678888 99999999999999999999999999999999 56899999999999999998
Q ss_pred CCCccceee---ecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------------------------
Q psy14511 313 THSDYPTAI---TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------------------------ 364 (488)
Q Consensus 313 ~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------------------------ 364 (488)
+++ ....+ ..|...|.+++|+|++++|++++ |+.|++||+++.+....+..
T Consensus 147 ~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 147 TDT-LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TTE-EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred cCe-EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 764 45555 67999999999999999999999 69999999987643322211
Q ss_pred -------eee--eecCCCCEEEEEccCCCCeEEEEeCCCcce--------------eEEEeeccccEEEEEEcCC--CCE
Q psy14511 365 -------IVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHL--------------IEELKIHQERILSAVLSPD--QTC 419 (488)
Q Consensus 365 -------~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~s~~--~~~ 419 (488)
.+. .|+ ++++++ ++.|+.|++||+.+++. +..+..|...|++++|+|+ +++
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~--~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILS--KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEE--ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred cccCCcceEEEEEEc--CCEEEE--EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 111 444 778888 78899999999987644 7888899999999999999 999
Q ss_pred EEEEeCCCcEEEEecCCCCcc-----ccccc--cCCcceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511 420 VAAASADETISIWNCFPRDKK-----RKARQ--VGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT 482 (488)
Q Consensus 420 l~t~~~dg~v~iw~~~~~~~~-----~~~~~--~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~ 482 (488)
|++++.||.|++||+.+++.. ....| ...+.+++|+|+++.+ +.+..+..+.+|..
T Consensus 302 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-------~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 302 LALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL-------IAVCDDASIWRWDR 364 (366)
T ss_dssp EEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE-------EEEETTSEEEEEEC
T ss_pred EEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE-------EEEeCCCEEEEEEe
Confidence 999999999999999998754 23444 6899999999999876 34556777777764
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=269.87 Aligned_cols=260 Identities=12% Similarity=0.102 Sum_probs=189.2
Q ss_pred CCceEEEeecCCeEEEEEccc---Ccccceee-cccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccccc-
Q psy14511 4 NGNLLSCGTIGGNILHYDVRT---HSDYPTAI-TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ- 77 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~---~~~~~~~~-~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~- 77 (488)
||++||+|+.||+|+|||+.+ +......+ .+|...|.+++|+|++++|++++ |+.|++||++............
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 154 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC 154 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence 789999999999999999987 43222122 26999999999999999999998 9999999995211111111111
Q ss_pred ---------c--cccceeEEE--EecCCCeEEeeeCCcccceEEEEecCCCeeeeeeec--CCCccccccccccccccce
Q psy14511 78 ---------C--HLSAVKAIA--WCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKT--DSQQANDETISYREQKKRR 142 (488)
Q Consensus 78 ---------~--h~~~v~~l~--~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 142 (488)
. +...+.++. +++++..+++++. |+.|++||+.+++.+..+.. +...
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~h~~~--------------- 216 (437)
T 3gre_A 155 ECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN---LSRVIIFDIRTLERLQIIENSPRHGA--------------- 216 (437)
T ss_dssp EEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET---TSEEEEEETTTCCEEEEEECCGGGCC---------------
T ss_pred ceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCeeeEEEccCCCCCc---------------
Confidence 1 445666666 5577877777766 99999999999988777765 2221
Q ss_pred eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEECCCeE
Q psy14511 143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVALDTSV 220 (488)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~v 220 (488)
+.++.|+ +..+++++.|+.|
T Consensus 217 ----------------------------------------------------------v~~~~~s~~~~~l~s~~~dg~i 238 (437)
T 3gre_A 217 ----------------------------------------------------------VSSICIDEECCVLILGTTRGII 238 (437)
T ss_dssp ----------------------------------------------------------EEEEEECTTSCEEEEEETTSCE
T ss_pred ----------------------------------------------------------eEEEEECCCCCEEEEEcCCCeE
Confidence 2223333 3457788899999
Q ss_pred EEEECCCCceEEEEecCCCCCCceEEEEEc----CCCCeEEEEeCCCCcEEEEECCcceeeeeecc--------------
Q psy14511 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWK----PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-------------- 282 (488)
Q Consensus 221 ~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-------------- 282 (488)
++||+++++....+... +...|.+++|+ |++.+++++ +.|+.|++||+++++.+..+.+
T Consensus 239 ~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (437)
T 3gre_A 239 DIWDIRFNVLIRSWSFG--DHAPITHVEVCQFYGKNSVIVVGG-SSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIE 315 (437)
T ss_dssp EEEETTTTEEEEEEBCT--TCEEEEEEEECTTTCTTEEEEEEE-STTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBC
T ss_pred EEEEcCCccEEEEEecC--CCCceEEEEeccccCCCccEEEEE-cCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccc
Confidence 99999998887776543 67789999665 457788888 9999999999998887776653
Q ss_pred ------------ccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC---CccEEEEEEccCCcEEEEE
Q psy14511 283 ------------HMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE---GDVVCGLKWSPNGRYLASG 343 (488)
Q Consensus 283 ------------~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~ 343 (488)
|...|.+++| ++++|++++.|+.|++||+.+++ ....+.+| ...+....++++..+++..
T Consensus 316 ~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (437)
T 3gre_A 316 KGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELS-SSKAVISPSRFSDVFIPTQVTANLTMLLRK 391 (437)
T ss_dssp SSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGG-GCEEEECC--CCCEEEEEEEETTEEEEEEE
T ss_pred cccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcc-cceEEecccccCceEEEEEeecceEEEEEe
Confidence 4556778888 57899999999999999999864 44555543 2334444555555444443
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-34 Score=255.49 Aligned_cols=275 Identities=11% Similarity=0.071 Sum_probs=216.5
Q ss_pred eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe
Q psy14511 38 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK 116 (488)
Q Consensus 38 ~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~ 116 (488)
......+.+++++|++|+ |+.|++||+.+++.... +. ...|.++.|+|+ +++++. |++|++|+..
T Consensus 38 ~~~~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~---~~--~~~v~~~~~~~~---~~s~s~---D~~i~~w~~~--- 103 (343)
T 3lrv_A 38 KELNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITT---IT--TPNPRTGGEHPA---IISRGP---CNRLLLLYPG--- 103 (343)
T ss_dssp EEECSSSSEEEEEEEEEEETTEEEEEEESSSSCEEE---EE--EECCCTTCCCCS---EEEECS---TTEEEEEETT---
T ss_pred hhhhhhhcCCCCEEEEECCCCcEEEEECCCCcEEEE---Ee--cCCceeeeeCCc---eEEecC---CCeEEEEEcc---
Confidence 344456667899999998 99999999987553332 22 567888899987 555554 9999999964
Q ss_pred eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcc
Q psy14511 117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSII 196 (488)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (488)
T Consensus 104 -------------------------------------------------------------------------------- 103 (343)
T 3lrv_A 104 -------------------------------------------------------------------------------- 103 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC--CCCeEEEEeCCCCcEEEEECCcc
Q psy14511 197 NDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP--RTTDLAVTNTCTEYIDLWHEQEE 274 (488)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~~i~i~d~~~~ 274 (488)
+.+.+|+..+++........ |...|.+++|+| ++++++++ +.|+.|++||++++
T Consensus 104 ---------------------~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~-s~dg~i~~wd~~~~ 159 (343)
T 3lrv_A 104 ---------------------NQITILDSKTNKVLREIEVD--SANEIIYMYGHNEVNTEYFIWA-DNRGTIGFQSYEDD 159 (343)
T ss_dssp ---------------------TEEEEEETTTCCEEEEEECC--CSSCEEEEECCC---CCEEEEE-ETTCCEEEEESSSS
T ss_pred ---------------------CceEEeecCCcceeEEeecC--CCCCEEEEEcCCCCCCCEEEEE-eCCCcEEEEECCCC
Confidence 23556777777755555433 677899999999 99999999 99999999999998
Q ss_pred eeeeeec-cccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec-CCccEEEEEEccCCcEEEEEecCeEEE
Q psy14511 275 RLIQKLR-THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR-EGDVVCGLKWSPNGRYLASGSNNTVKI 350 (488)
Q Consensus 275 ~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d~~i~i 350 (488)
+...... .+...+.+++| ++.++++|+.||.|++||++++......+.. |..+|.+++|+|++++|++++++.|++
T Consensus 160 ~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~i 239 (343)
T 3lrv_A 160 SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVC 239 (343)
T ss_dssp CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEE
T ss_pred cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEE
Confidence 8876664 35557889999 7899999999999999999987654366777 999999999999999999999889999
Q ss_pred EECCCCCCCcccce-----e-----eeeecCCCCEEEEEccCC-CCeEEEEeCCCcceeEEEeeccccEEEEEEcC---C
Q psy14511 351 WDFRQLDAKRPLGL-----I-----VPKLKREGRELVTSHGKQ-DCSLKMWEYPRLHLIEELKIHQERILSAVLSP---D 416 (488)
Q Consensus 351 wd~~~~~~~~~~~~-----~-----~~~~~~~~~~l~~~~g~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~---~ 416 (488)
||+++.+....+.. . ..+|+|+|++++++ +. ++.+++|++.+....... .++..++|+| +
T Consensus 240 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~--s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~ 313 (343)
T 3lrv_A 240 FDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY--SNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTAD 313 (343)
T ss_dssp EETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE--ETTTTEEEEEEECTTTCSEEE----EEEEECCC----CC
T ss_pred EEcCCCCcceeecccccccccccceEEEECCCCCEEEEe--cCCCCcEEEEEEcccccceEe----cCceeEecCccccc
Confidence 99998865544332 1 25899999999994 55 899999999765543333 5688899999 8
Q ss_pred CCEEEEEeCCCcEEEEecCC
Q psy14511 417 QTCVAAASADETISIWNCFP 436 (488)
Q Consensus 417 ~~~l~t~~~dg~v~iw~~~~ 436 (488)
.+.+++++.||.+.++-...
T Consensus 314 ~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 314 FTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp CCEEEEEEETTEEEEEEECS
T ss_pred cceeEEEecCCceEEEEecC
Confidence 99999999999999886543
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-34 Score=260.97 Aligned_cols=248 Identities=17% Similarity=0.273 Sum_probs=198.0
Q ss_pred ceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC--CCeEEeeeCCcccc
Q psy14511 29 PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQ 105 (488)
Q Consensus 29 ~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~ 105 (488)
...+.+|.+.|++++|+|++++||+++ |+.|+|||+.... ...+..+.+|...|++++|+++ ++++++++. |+
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~---dg 79 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DG 79 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TS
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-ceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc---CC
Confidence 456889999999999999999999998 9999999997322 3345567889999999999977 777777776 99
Q ss_pred eEEEEecCCCe--eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511 106 TVRLWNSMNGK--EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK 183 (488)
Q Consensus 106 ~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (488)
.|++||+.+++ ....+..+...
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~-------------------------------------------------------- 103 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSAS-------------------------------------------------------- 103 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSC--------------------------------------------------------
T ss_pred EEEEEEcCCCceeEeeeecCCCcc--------------------------------------------------------
Confidence 99999999886 33333333222
Q ss_pred CCCceeecCCCccccceeeeeeeC----CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC--------
Q psy14511 184 AKPERILEAPSIINDFYTSGLDWG----YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-------- 251 (488)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------- 251 (488)
+.++.|+ +..+++++.|+.|++||+.++.......... |...|.+++|+|
T Consensus 104 -----------------v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 104 -----------------VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp -----------------EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC-CTTCEEEEEECCCC------
T ss_pred -----------------eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC-CCCceEEEEEcCcccccccc
Confidence 2223333 2457888899999999999885544444444 889999999999
Q ss_pred -----CCCeEEEEeCCCCcEEEEECCcce----eeeeeccccccEEEEEe--c---CCEEEEeecCCeEEEEECcCCCcc
Q psy14511 252 -----RTTDLAVTNTCTEYIDLWHEQEER----LIQKLRTHMHQVIAMCW--N---GNLLSCGTIGGNILHYDVRTHSDY 317 (488)
Q Consensus 252 -----~~~~l~~~~~~~~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~---~~~l~~~~~dg~i~i~d~~~~~~~ 317 (488)
+++.++++ +.|+.|++||++.+. ....+.+|...|.+++| + +++|++++.||.|++||++.....
T Consensus 166 ~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 244 (379)
T 3jrp_A 166 HNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 244 (379)
T ss_dssp ----CTTCEEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred ccCCCCCCEEEEE-eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence 68899988 999999999987643 55677889999999999 5 789999999999999999876422
Q ss_pred ----ceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511 318 ----PTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ 355 (488)
Q Consensus 318 ----~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~ 355 (488)
......|...|.+++|+|++++|++++ ||.|++|++..
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 222334788899999999999999988 69999999874
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.4e-33 Score=252.52 Aligned_cols=313 Identities=11% Similarity=0.110 Sum_probs=210.2
Q ss_pred EEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEee
Q psy14511 19 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLAT 98 (488)
Q Consensus 19 iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~ 98 (488)
||++.+.+.+ ..+.+|...|.+++|+|||++||+|++..++|||+++++... ..+...+..+++.++++.++.+
T Consensus 3 i~s~~~~~~~-~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPI-VPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIM-----SQEMRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEE-----EEECSCCCEEEECTTSSEEEEE
T ss_pred cccccccCCc-cccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceee-----eeecCCeEEEEEcCCCCEEEEE
Confidence 5666665543 356889999999999999999999996678999987643221 1222358889999998888666
Q ss_pred eCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511 99 GGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL 178 (488)
Q Consensus 99 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
++. |++|++||+.+++.+..+....
T Consensus 77 ~~~--d~~v~iWd~~~~~~~~~~~~~~----------------------------------------------------- 101 (355)
T 3vu4_A 77 TGV--KEVVHIWDDVKKQDVSRIKVDA----------------------------------------------------- 101 (355)
T ss_dssp CSS--TTEEEEEETTTTEEEEEEECSS-----------------------------------------------------
T ss_pred ECC--ccEEEEEECCCCcEEEEEECCC-----------------------------------------------------
Confidence 664 8999999999998776654321
Q ss_pred cccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCC-ceEEEEecCCCCCCceEEEEEcCCCCeEE
Q psy14511 179 PRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTN-KTQLLVEYPTYDNAYISCVAWKPRTTDLA 257 (488)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 257 (488)
.+..+.++++.++ .+.++.|++||+.++ +....+. . +...+++++ ..++
T Consensus 102 ---------------------~v~~v~~~~~~~~-~~~~~~i~i~d~~~~~~~~~~~~----~--~~~~~~~s~--~~la 151 (355)
T 3vu4_A 102 ---------------------PVKDLFLSREFIV-VSYGDVISVFKFGNPWKRITDDI----R--FGGVCEFSN--GLLV 151 (355)
T ss_dssp ---------------------CEEEEEECSSEEE-EEETTEEEEEESSTTCCBSSCCE----E--EEEEEEEET--TEEE
T ss_pred ---------------------ceEEEEEcCCEEE-EEEcCEEEEEECCCCceeeEEec----c--CCceEEEEc--cEEE
Confidence 1222344444444 446889999999987 4333222 1 344566777 5676
Q ss_pred EE-eCCCCcEEEEECCcce----------------eeeeeccccccEEEEEe--cCCEEEEeecCCe-EEEEECcCCCcc
Q psy14511 258 VT-NTCTEYIDLWHEQEER----------------LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGN-ILHYDVRTHSDY 317 (488)
Q Consensus 258 ~~-~~~~~~i~i~d~~~~~----------------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~i~d~~~~~~~ 317 (488)
++ ++.+|.|++||+.+++ .+..+.+|...|.+++| ++++|++++.|+. |++||+++++ .
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~-~ 230 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV-L 230 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-E
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-E
Confidence 64 5899999999998765 26788899999999999 7899999999998 9999999864 5
Q ss_pred ceeee-c-CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511 318 PTAIT-R-EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPR 394 (488)
Q Consensus 318 ~~~~~-~-~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~ 394 (488)
...+. + |...|.+++|+|++++|++++ |+.|++||++.....+.. .+...+.|. + -...-.+..+.+.
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~-~~~~~~~~~--~-----~~~~~~~~~~~~~- 301 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH-ALKGWINMK--Y-----FQSEWSLCNFKLS- 301 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE-ETTTTEECC--C-----CCCSSCSEEEECC-
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc-cccceeecc--c-----cccccceeEEEec-
Confidence 55665 5 999999999999999999999 599999999865322110 000000000 0 0000001111111
Q ss_pred cceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511 395 LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK 439 (488)
Q Consensus 395 ~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~ 439 (488)
..+..+...++|+||+++|++++.||.+++|++.+++.
T Consensus 302 -------~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 302 -------VDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp -------CCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred -------cCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 11223346799999999999999999999999876553
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-33 Score=262.91 Aligned_cols=281 Identities=8% Similarity=0.004 Sum_probs=217.5
Q ss_pred ceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc-----------------------------------------
Q psy14511 37 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN----------------------------------------- 75 (488)
Q Consensus 37 ~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~----------------------------------------- 75 (488)
.++.+++|+|+|++|+++.++.|++||+.+++....+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 468899999999988888899999999987761111111
Q ss_pred -------------ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC--CCeeeeeeecCCCcccccccccccccc
Q psy14511 76 -------------NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM--NGKEKCHVKTDSQQANDETISYREQKK 140 (488)
Q Consensus 76 -------------~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (488)
..+|.+.|.+++|+|++++|+++++. |+.|++||+. +++.+..+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~--dg~v~iwd~~~~~~~~~~~~~~----------------- 145 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADS--DKSLLVFDVDKTSKNVLKLRKR----------------- 145 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGG--GTEEEEEEECSSSSSCEEEEEE-----------------
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECC--CCeEEEEECcCCCCceeeeeec-----------------
Confidence 12455579999999999987666653 9999999987 5543322211
Q ss_pred ceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeE
Q psy14511 141 RRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSV 220 (488)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 220 (488)
T Consensus 146 -------------------------------------------------------------------------------- 145 (450)
T 2vdu_B 146 -------------------------------------------------------------------------------- 145 (450)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee----eeccccccEEEEEe--c-
Q psy14511 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ----KLRTHMHQVIAMCW--N- 293 (488)
Q Consensus 221 ~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~----~~~~~~~~v~~~~~--~- 293 (488)
.. +...|.+++|+|++++|+++ +.+|.+++|++.+++... .+.+|...|.+++| +
T Consensus 146 ----------------~~-~~~~v~~~~~sp~~~~l~~~-~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 207 (450)
T 2vdu_B 146 ----------------FC-FSKRPNAISIAEDDTTVIIA-DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDS 207 (450)
T ss_dssp ----------------EE-CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECT
T ss_pred ----------------cc-CCCCceEEEEcCCCCEEEEE-eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCC
Confidence 01 56789999999999999999 889999999998876554 77889999999999 6
Q ss_pred --CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce------
Q psy14511 294 --GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL------ 364 (488)
Q Consensus 294 --~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~------ 364 (488)
+++|++++.|+.|++||++++......+.+|...|.+++|+ ++++|++++ |+.|++||+.+++....+..
T Consensus 208 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~ 286 (450)
T 2vdu_B 208 DGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKP 286 (450)
T ss_dssp TSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGG
T ss_pred CCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhh
Confidence 77999999999999999988654333466899999999999 999999999 69999999998764433321
Q ss_pred ----------------------e--eeeecCCCCEEEEEccCCCCeEEEEeC--CCc---ceeEEEeeccccEEEEEEcC
Q psy14511 365 ----------------------I--VPKLKREGRELVTSHGKQDCSLKMWEY--PRL---HLIEELKIHQERILSAVLSP 415 (488)
Q Consensus 365 ----------------------~--~~~~~~~~~~l~~~~g~~~~~i~i~d~--~~~---~~~~~~~~~~~~v~~~~~s~ 415 (488)
. ...|+|++++++++ +..++.|++|++ .++ +.+..+..| ..|.+++|+|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~ 364 (450)
T 2vdu_B 287 YLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFF-VEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN 364 (450)
T ss_dssp GCCTTSBC----------CBCCCEEEEEECSSSSEEEEE-ETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET
T ss_pred hhhhcccccccccccccccceEEEEEEEEeCCCCEEEEE-ECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC
Confidence 0 12889999999984 337999999999 555 677788888 8899999999
Q ss_pred CCCEEEEEeC------CCcEEEEecCCC
Q psy14511 416 DQTCVAAASA------DETISIWNCFPR 437 (488)
Q Consensus 416 ~~~~l~t~~~------dg~v~iw~~~~~ 437 (488)
++.++++++. +..|.+|.+...
T Consensus 365 ~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 365 DEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp TEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 6544444443 456899987643
No 106
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=257.91 Aligned_cols=266 Identities=16% Similarity=0.243 Sum_probs=213.1
Q ss_pred CceEEEeecCCeEEEEEccc-CcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511 5 GNLLSCGTIGGNILHYDVRT-HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA 82 (488)
Q Consensus 5 g~~la~g~~dg~i~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~ 82 (488)
|++||+|+.||.|+|||+.+ +..+...+.+|...|.+++|+|++++|++++ |+.|++||+.+++.. ...+|...
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~~ 129 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI----QIAQHDAP 129 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE----EEEECSSC
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce----eeccccCc
Confidence 79999999999999999998 5545477889999999999999999999998 999999999875432 25669999
Q ss_pred eeEEEE--ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceec
Q psy14511 83 VKAIAW--CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLN 160 (488)
Q Consensus 83 v~~l~~--~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (488)
|.+++| +|+++++++++. |+.|++||+.+++.+..+..+..
T Consensus 130 v~~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~---------------------------------- 172 (368)
T 3mmy_A 130 VKTIHWIKAPNYSCVMTGSW---DKTLKFWDTRSSNPMMVLQLPER---------------------------------- 172 (368)
T ss_dssp EEEEEEEECSSCEEEEEEET---TSEEEEECSSCSSCSEEEECSSC----------------------------------
T ss_pred eEEEEEEeCCCCCEEEEccC---CCcEEEEECCCCcEEEEEecCCC----------------------------------
Confidence 999999 889887777776 99999999998887666554311
Q ss_pred cccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCC
Q psy14511 161 QSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~ 240 (488)
...+.+....+++++.++.+++|++............. .
T Consensus 173 ----------------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~ 211 (368)
T 3mmy_A 173 ----------------------------------------CYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP-L 211 (368)
T ss_dssp ----------------------------------------EEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCS-C
T ss_pred ----------------------------------------ceEEEecCCeeEEEeCCCcEEEEEeccccchhhhcccc-c
Confidence 11233334578888899999999998876544333322 5
Q ss_pred CCceEEEEEcCCCCe----EEEEeCCCCcEEEEECCcc---eeeeeeccccc------------cEEEEEe--cCCEEEE
Q psy14511 241 NAYISCVAWKPRTTD----LAVTNTCTEYIDLWHEQEE---RLIQKLRTHMH------------QVIAMCW--NGNLLSC 299 (488)
Q Consensus 241 ~~~i~~~~~~~~~~~----l~~~~~~~~~i~i~d~~~~---~~~~~~~~~~~------------~v~~~~~--~~~~l~~ 299 (488)
.....++++.++... ++++ +.|+.|++||++.. .....+..|.. .|.+++| ++++|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 290 (368)
T 3mmy_A 212 KHQHRCVAIFKDKQNKPTGFALG-SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLAT 290 (368)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEE-ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEE
T ss_pred cCCCceEEEcccCCCCCCeEEEe-cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEE
Confidence 566777777666554 8888 99999999999876 55666777766 7999999 6889999
Q ss_pred eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC
Q psy14511 300 GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354 (488)
Q Consensus 300 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~ 354 (488)
++.||.|++||++++ .....+..|..+|.+++|+|++++|++++ |+..+.|++.
T Consensus 291 ~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 291 VGSDGRFSFWDKDAR-TKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EETTSCEEEEETTTT-EEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EccCCeEEEEECCCC-cEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 999999999999985 46778889999999999999999999998 4544444433
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.9e-32 Score=252.82 Aligned_cols=271 Identities=16% Similarity=0.255 Sum_probs=207.9
Q ss_pred EEEEEEccCCcEEE-Eec-CCeEEEEecccc-CcCCCcccccccccceeEEEEec-CCCeEEeeeCCcccceEEEEecCC
Q psy14511 39 VCGLKWSPNGRYLA-SGS-NNTVKIWDFRQL-DAKRPQVNNQCHLSAVKAIAWCP-WEPTLLATGGGICDQTVRLWNSMN 114 (488)
Q Consensus 39 V~~l~~sp~g~~la-s~~-d~~i~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~~~~~~~~d~~i~vwd~~~ 114 (488)
...++++|+...++ +++ ||.|+||++... +....+..+.+|.+.|.+++|+| ++++|++++. |++|++||+.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---dg~v~vw~~~~ 113 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE---DCTVMVWEIPD 113 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET---TSEEEEEECCT
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC---CCeEEEEEccC
Confidence 45688898876555 455 999999999653 22245556788999999999999 7776666665 99999999987
Q ss_pred CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511 115 GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS 194 (488)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (488)
+.......
T Consensus 114 ~~~~~~~~------------------------------------------------------------------------ 121 (402)
T 2aq5_A 114 GGLVLPLR------------------------------------------------------------------------ 121 (402)
T ss_dssp TCCSSCBC------------------------------------------------------------------------
T ss_pred CCCccccC------------------------------------------------------------------------
Confidence 64221000
Q ss_pred ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC-CeEEEEeCCCCcEEEEECCc
Q psy14511 195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT-TDLAVTNTCTEYIDLWHEQE 273 (488)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~~i~i~d~~~ 273 (488)
+....+ .+ |...|.+++|+|++ +.++++ +.|+.|++||+++
T Consensus 122 ----------------------------------~~~~~~--~~-h~~~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~ 163 (402)
T 2aq5_A 122 ----------------------------------EPVITL--EG-HTKRVGIVAWHPTAQNVLLSA-GCDNVILVWDVGT 163 (402)
T ss_dssp ----------------------------------SCSEEE--EC-CSSCEEEEEECSSBTTEEEEE-ETTSCEEEEETTT
T ss_pred ----------------------------------CceEEe--cC-CCCeEEEEEECcCCCCEEEEE-cCCCEEEEEECCC
Confidence 001111 12 88899999999998 577777 9999999999999
Q ss_pred ceeeeee--ccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceee-ecCCcc-EEEEEEccCCcEEEEE---e
Q psy14511 274 ERLIQKL--RTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAI-TREGDV-VCGLKWSPNGRYLASG---S 344 (488)
Q Consensus 274 ~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~-i~~~~~s~~~~~l~~~---~ 344 (488)
++.+..+ ..|...|.+++| ++++|++++.||.|++||++++. ....+ ..|... +.+++|+|++++|+++ +
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 242 (402)
T 2aq5_A 164 GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT-VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM 242 (402)
T ss_dssp TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-EEEEEECSSCSSSCCEEEECSTTEEEEEEECTT
T ss_pred CCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc-eeeeeccCCCCCcceEEEEcCCCcEEEEeccCC
Confidence 9999999 789999999999 78999999999999999999864 44555 677665 8899999999999988 3
Q ss_pred -cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEE-eeccccEEEEEEcCCCCEEEE
Q psy14511 345 -NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEEL-KIHQERILSAVLSPDQTCVAA 422 (488)
Q Consensus 345 -d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~t 422 (488)
|+.|++||+++.+ .++... ..|...+.+++|+|++++|++
T Consensus 243 ~d~~i~iwd~~~~~--------------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 243 SERQVALWDTKHLE--------------------------------------EPLSLQELDTSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp CCEEEEEEETTBCS--------------------------------------SCSEEEECCCCSSCEEEEEETTTTEEEE
T ss_pred CCceEEEEcCcccc--------------------------------------CCceEEeccCCCceeEEEEcCCCCEEEE
Confidence 4777777766431 011111 236677999999999999975
Q ss_pred -EeCCCcEEEEecCCCCc-c-cc--ccccCCcceEEeecCCCce
Q psy14511 423 -ASADETISIWNCFPRDK-K-RK--ARQVGSGSSLEFAILKQPV 461 (488)
Q Consensus 423 -~~~dg~v~iw~~~~~~~-~-~~--~~~~~~v~~~~~s~~~~~~ 461 (488)
++.||.|++||+.++++ . .. ..+...+.+++|+|++..+
T Consensus 285 ~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~ 328 (402)
T 2aq5_A 285 CGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLE 328 (402)
T ss_dssp EETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSC
T ss_pred EEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccc
Confidence 55799999999999884 2 22 2356899999999998775
No 108
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=264.72 Aligned_cols=276 Identities=14% Similarity=0.273 Sum_probs=199.1
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcc----------cceeecccC------------ceEEEEEEccCC--cEEEEec-C
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSD----------YPTAITREG------------DVVCGLKWSPNG--RYLASGS-N 56 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~----------~~~~~~~h~------------~~V~~l~~sp~g--~~las~~-d 56 (488)
+.||++||+|+.||.|+|||+.+++. ....+.+|. +.|++++|+|++ .+|++++ |
T Consensus 37 s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d 116 (447)
T 3dw8_B 37 NHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND 116 (447)
T ss_dssp CSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred CCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence 34899999999999999999987662 345678898 889999999998 7888888 9
Q ss_pred CeEEEEeccccCcCCC------------------------------------c-ccccccccceeEEEEecCCCeEEeee
Q psy14511 57 NTVKIWDFRQLDAKRP------------------------------------Q-VNNQCHLSAVKAIAWCPWEPTLLATG 99 (488)
Q Consensus 57 ~~i~vwd~~~~~~~~~------------------------------------~-~~~~~h~~~v~~l~~~~~~~~l~~~~ 99 (488)
+.|++||+.++..... . ....+|...|.+++|+|++++++++
T Consensus 117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~- 195 (447)
T 3dw8_B 117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA- 195 (447)
T ss_dssp SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-
T ss_pred CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-
Confidence 9999999976332100 0 1135799999999999999876664
Q ss_pred CCcccceEEEEecCCC-eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccc
Q psy14511 100 GGICDQTVRLWNSMNG-KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKL 178 (488)
Q Consensus 100 ~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
. |+.|++||+.++ +....+..... .
T Consensus 196 ~---d~~i~iwd~~~~~~~~~~~~~~~~-----~---------------------------------------------- 221 (447)
T 3dw8_B 196 D---DLRINLWHLEITDRSFNIVDIKPA-----N---------------------------------------------- 221 (447)
T ss_dssp C---SSEEEEEETTEEEEEEEEEECCCS-----S----------------------------------------------
T ss_pred C---CCeEEEEECCCCCceeeeeecccc-----c----------------------------------------------
Confidence 5 999999999843 33222211100 0
Q ss_pred cccccCCCceeecCCCccccceeeeeeeCC---CcEEEEECCCeEEEEECCCCce----EEEEecCCCCCC---------
Q psy14511 179 PRKVKAKPERILEAPSIINDFYTSGLDWGY---HDTLAVALDTSVYTWNTKTNKT----QLLVEYPTYDNA--------- 242 (488)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iw~~~~~~~----~~~~~~~~~~~~--------- 242 (488)
-......+.++.|++ ..+++++.|+.|++||+.+++. ...+.. +..
T Consensus 222 ---------------~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 283 (447)
T 3dw8_B 222 ---------------MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEE---PEDPSNRSFFSE 283 (447)
T ss_dssp ---------------GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECC---C-----CCHHHH
T ss_pred ---------------ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEecc---CCCccccccccc
Confidence 000111234455554 3577788999999999998875 444443 443
Q ss_pred ---ceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeecccccc---------------EEEEEe--cCCEEEEee
Q psy14511 243 ---YISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQ---------------VIAMCW--NGNLLSCGT 301 (488)
Q Consensus 243 ---~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~---------------v~~~~~--~~~~l~~~~ 301 (488)
.|.+++|+|++++|+++ +. +.|++||++. ++++..+..|... +..++| ++++|++++
T Consensus 284 ~~~~v~~~~~s~~g~~l~~~-~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s 361 (447)
T 3dw8_B 284 IISSISDVKFSHSGRYMMTR-DY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS 361 (447)
T ss_dssp HTTCEEEEEECTTSSEEEEE-ES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC
T ss_pred cCceEEEEEECCCCCEEEEe-eC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEec
Confidence 89999999999999988 66 9999999997 7888888877542 223666 789999999
Q ss_pred cCCeEEEEECcCCCccceeee---------------------------------cCCccEEEEEEccCCcEEEEEecCeE
Q psy14511 302 IGGNILHYDVRTHSDYPTAIT---------------------------------REGDVVCGLKWSPNGRYLASGSNNTV 348 (488)
Q Consensus 302 ~dg~i~i~d~~~~~~~~~~~~---------------------------------~~~~~i~~~~~s~~~~~l~~~~d~~i 348 (488)
.||.|++||+.+++.. .+. .+...|..++|+|++.+||+++.+.+
T Consensus 362 ~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~ 439 (447)
T 3dw8_B 362 YNNFFRMFDRNTKRDI--TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNL 439 (447)
T ss_dssp STTEEEEEETTTCCEE--EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCE
T ss_pred cCCEEEEEEcCCCcce--eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEeccee
Confidence 9999999999876421 222 22345677888888888887776667
Q ss_pred EEEECC
Q psy14511 349 KIWDFR 354 (488)
Q Consensus 349 ~iwd~~ 354 (488)
++|..+
T Consensus 440 ~~~~~~ 445 (447)
T 3dw8_B 440 YIFQDK 445 (447)
T ss_dssp EEEECC
T ss_pred eeeccc
Confidence 777643
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.5e-33 Score=249.74 Aligned_cols=263 Identities=13% Similarity=0.057 Sum_probs=212.1
Q ss_pred cCCceEEEeecCCeEEEEEcccCcc--cceeecccCceEEEEEEccCCc-EEEEec-CCeEEEEec-cccCcCCCccccc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSD--YPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDF-RQLDAKRPQVNNQ 77 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~--~~~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~-~~~~~~~~~~~~~ 77 (488)
.||++||+|+.||.|+|||+.++.. ....+.+|...|.+++|+|+++ +|++++ |+.|++||+ .+++. ..+.
T Consensus 21 ~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~----~~~~ 96 (342)
T 1yfq_A 21 PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF----QALT 96 (342)
T ss_dssp GGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE----EECB
T ss_pred CCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce----Eecc
Confidence 3899999999999999999987761 1234568999999999999999 999998 999999999 76432 4467
Q ss_pred c--cccceeEEEEecCCCeEEeeeCCcccceEEEEecCC---------CeeeeeeecCCCccccccccccccccceeEEE
Q psy14511 78 C--HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN---------GKEKCHVKTDSQQANDETISYREQKKRRHLSF 146 (488)
Q Consensus 78 ~--h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (488)
+ |...|.+++|+| ++.+++++. |+.|++||+.+ ++.+..+.
T Consensus 97 ~~~~~~~v~~l~~~~-~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~------------------------ 148 (342)
T 1yfq_A 97 NNEANLGICRICKYG-DDKLIAASW---DGLIEVIDPRNYGDGVIAVKNLNSNNTK------------------------ 148 (342)
T ss_dssp SCCCCSCEEEEEEET-TTEEEEEET---TSEEEEECHHHHTTBCEEEEESCSSSSS------------------------
T ss_pred ccCCCCceEEEEeCC-CCEEEEEcC---CCeEEEEcccccccccccccCCeeeEEe------------------------
Confidence 7 999999999999 877777776 99999999865 22211111
Q ss_pred EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC
Q psy14511 147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226 (488)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~ 226 (488)
....+.++.++++.+++++.++.|++||+.
T Consensus 149 --------------------------------------------------~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 149 --------------------------------------------------VKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178 (342)
T ss_dssp --------------------------------------------------SCCCEEEEEECSSEEEEEESTTEEEEEESS
T ss_pred --------------------------------------------------eCCceEEEEecCCcEEEEeCCCeEEEEECC
Confidence 112344566777778999999999999999
Q ss_pred C-CceEEEEecCCCCCCceEEEEEcC-CCCeEEEEeCCCCcEEEEECCcc------eeeeeeccccc---------cEEE
Q psy14511 227 T-NKTQLLVEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEYIDLWHEQEE------RLIQKLRTHMH---------QVIA 289 (488)
Q Consensus 227 ~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~i~i~d~~~~------~~~~~~~~~~~---------~v~~ 289 (488)
+ +.......... +...+.+++|+| ++++++++ +.+|.|++|+++.. +....+..|.. .|.+
T Consensus 179 ~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (342)
T 1yfq_A 179 LCEDDNGTIEESG-LKYQIRDVALLPKEQEGYACS-SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256 (342)
T ss_dssp CCTTCCCEEEECS-CSSCEEEEEECSGGGCEEEEE-ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE
T ss_pred ccccccceeeecC-CCCceeEEEECCCCCCEEEEE-ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEE
Confidence 8 55432222223 778999999999 99999999 89999999999876 67777777755 9999
Q ss_pred EEe--cCCEEEEeecCCeEEEEECcCCCccceeeecC-CccEEEEEEccCCcEEEEEe-cCe-EEEEE
Q psy14511 290 MCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGS-NNT-VKIWD 352 (488)
Q Consensus 290 ~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~-d~~-i~iwd 352 (488)
++| ++++|++++.||.|++||+.++ .....+..| ..+|.+++ |++++|++++ |+. .+.+.
T Consensus 257 ~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 257 IEFSPRHKFLYTAGSDGIISCWNLQTR-KKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTT-EEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred EEEcCCCCEEEEecCCceEEEEcCccH-hHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 999 6899999999999999999986 456677887 99999999 9999999998 687 55544
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.3e-33 Score=258.41 Aligned_cols=272 Identities=16% Similarity=0.327 Sum_probs=209.5
Q ss_pred eeecccCceEEEEEEccC-CcEEEEec-CCeEEEEecccc-------CcCCCcccccccccceeEEEEecCCCeEEeeeC
Q psy14511 30 TAITREGDVVCGLKWSPN-GRYLASGS-NNTVKIWDFRQL-------DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGG 100 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~-g~~las~~-d~~i~vwd~~~~-------~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~ 100 (488)
.....|.+.|++++|+|+ +++||+++ ||.|++||+.+. .....+..+.+|...|.+++|+|+++.++++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345689999999999997 78999998 999999999762 113455567889999999999999983444444
Q ss_pred CcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccc
Q psy14511 101 GICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR 180 (488)
Q Consensus 101 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (488)
. ||.|++|++..+.......
T Consensus 202 ~--dg~i~vwd~~~~~~~~~~~---------------------------------------------------------- 221 (430)
T 2xyi_A 202 D--DHTICLWDINATPKEHRVI---------------------------------------------------------- 221 (430)
T ss_dssp T--TSCEEEEETTSCCBGGGEE----------------------------------------------------------
T ss_pred C--CCeEEEEeCCCCCCCCcee----------------------------------------------------------
Confidence 3 9999999997643110000
Q ss_pred cccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC-CCCeEEEE
Q psy14511 181 KVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-RTTDLAVT 259 (488)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~ 259 (488)
.....+.+ |...|.+++|+| ++..++++
T Consensus 222 --------------------------------------------------~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 222 --------------------------------------------------DAKNIFTG-HTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp --------------------------------------------------ECSEEECC-CSSCEEEEEECSSCTTEEEEE
T ss_pred --------------------------------------------------ccceeecC-CCCCEeeeEEeCCCCCEEEEE
Confidence 00001112 788899999999 55666666
Q ss_pred eCCCCcEEEEECCcc---eeeeeeccccccEEEEEe--cCC-EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEE
Q psy14511 260 NTCTEYIDLWHEQEE---RLIQKLRTHMHQVIAMCW--NGN-LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333 (488)
Q Consensus 260 ~~~~~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~ 333 (488)
+.++.|++||++++ +.+..+..|...+.+++| ++. ++++|+.||.|++||+++.......+..|...|.+++|
T Consensus 251 -~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 251 -ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp -ETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred -eCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence 89999999999986 567777889999999999 344 79999999999999999866778889999999999999
Q ss_pred ccCCc-EEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEE
Q psy14511 334 SPNGR-YLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSA 411 (488)
Q Consensus 334 s~~~~-~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~ 411 (488)
+|+++ +|++++ |+.|++||+........... ..+ ...+++..+.+|...|+++
T Consensus 330 sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----------------~~~--------~~~~~~~~~~~h~~~v~~~ 384 (430)
T 2xyi_A 330 SPHNETILASSGTDRRLHVWDLSKIGEEQSTED-----------------AED--------GPPELLFIHGGHTAKISDF 384 (430)
T ss_dssp CSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH-----------------HHH--------CCTTEEEECCCCSSCEEEE
T ss_pred CCCCCCEEEEEeCCCcEEEEeCCCCccccCccc-----------------ccc--------CCcceEEEcCCCCCCceEE
Confidence 99995 677777 69999999876421110000 000 0135566778899999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCCC
Q psy14511 412 VLSPDQT-CVAAASADETISIWNCFPRD 438 (488)
Q Consensus 412 ~~s~~~~-~l~t~~~dg~v~iw~~~~~~ 438 (488)
+|+|+++ +|++++.||.|++|++.+..
T Consensus 385 ~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 385 SWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred EECCCCCCEEEEEECCCCEEEeEccccc
Confidence 9999999 89999999999999997543
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.2e-32 Score=241.03 Aligned_cols=273 Identities=19% Similarity=0.356 Sum_probs=212.5
Q ss_pred EEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeee
Q psy14511 39 VCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK 118 (488)
Q Consensus 39 V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~ 118 (488)
.++|+||+++ +||+|.|++|+|||+++++..+. ..+.+|...|++++|+|+++++++++. |++|++||+++++.+
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~-~~~~~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQL-LQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEE-EECCSTTCCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEE-EEecCCCCeEEEEEECCCCCEEEEEEC---CCcEEEeecCCceeE
Confidence 5779999986 88888899999999998764433 235678899999999999998877776 999999999999988
Q ss_pred eeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcccc
Q psy14511 119 CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND 198 (488)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (488)
..+..+....
T Consensus 103 ~~~~~h~~~~---------------------------------------------------------------------- 112 (318)
T 4ggc_A 103 RNMTSHSARV---------------------------------------------------------------------- 112 (318)
T ss_dssp EEEECCSSCE----------------------------------------------------------------------
T ss_pred EEecCccceE----------------------------------------------------------------------
Confidence 7776653211
Q ss_pred ceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--
Q psy14511 199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL-- 276 (488)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~-- 276 (488)
..+.+.+..+++++.++.+++|+......... ...+ |...+..+.+++++++++++ +.|+.|++||+++++.
T Consensus 113 ---~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~ 186 (318)
T 4ggc_A 113 ---GSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA-TLSG-HSQEVCGLRWAPDGRHLASG-GNDNLVNVWPSAPGEGGW 186 (318)
T ss_dssp ---EEEEEETTEEEEEETTSEEEEEETTSSSCEEE-EEEC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEESSCBTTBS
T ss_pred ---EEeecCCCEEEEEecCCceEeeecCCCceeEE-EEcC-ccCceEEEEEcCCCCEEEEE-ecCcceeEEECCCCcccc
Confidence 11223345677888999999999887654322 2233 88899999999999999999 9999999999987653
Q ss_pred --eeeeccccccEEEEEe---cCCEE--EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe---cC
Q psy14511 277 --IQKLRTHMHQVIAMCW---NGNLL--SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---NN 346 (488)
Q Consensus 277 --~~~~~~~~~~v~~~~~---~~~~l--~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---d~ 346 (488)
......+...+.++.+ ++..+ ++++.++.|++||.+... ......+...+..+.|+|+++.+++++ |+
T Consensus 187 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~ 264 (318)
T 4ggc_A 187 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA--CLSAVDAHSQVCSILWSPHYKELISGHGFAQN 264 (318)
T ss_dssp CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC--EEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc--ccccccceeeeeeeeecccccceEEEEEcCCC
Confidence 3444567888998888 23443 466788999999998754 334455667799999999999887764 59
Q ss_pred eEEEEECCCCCCCccccee---e--eeecCCCCEEEEEccCCCCeEEEEeCCCcc
Q psy14511 347 TVKIWDFRQLDAKRPLGLI---V--PKLKREGRELVTSHGKQDCSLKMWEYPRLH 396 (488)
Q Consensus 347 ~i~iwd~~~~~~~~~~~~~---~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~ 396 (488)
.|++||+++++....+..+ + .+|+|++++|++ ++.|++|++||+.+..
T Consensus 265 ~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S--~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 265 QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS--AAADETLRLWRCFELD 317 (318)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE--EETTTEEEEECCSCCC
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE--EecCCeEEEEECCCCC
Confidence 9999999988665554432 1 289999999999 7899999999997654
No 112
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.4e-33 Score=251.79 Aligned_cols=290 Identities=14% Similarity=0.220 Sum_probs=197.5
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcc---cceeecccCceEEEEEEcc--CCcEEEEec-CCeEEEEeccccCcC-----
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSD---YPTAITREGDVVCGLKWSP--NGRYLASGS-NNTVKIWDFRQLDAK----- 70 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~---~~~~~~~h~~~V~~l~~sp--~g~~las~~-d~~i~vwd~~~~~~~----- 70 (488)
+.||++||+|+.||.|+|||+.++.. ....+.+|...|.+++|+| ++++|++++ |+.|++||+.+++..
T Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 99 (351)
T 3f3f_A 20 DFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRR 99 (351)
T ss_dssp CSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCS
T ss_pred cCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccC
Confidence 34899999999999999999987642 3345679999999999999 699999998 999999999875422
Q ss_pred -CCcccccccccceeEEEEecC--CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEE
Q psy14511 71 -RPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFL 147 (488)
Q Consensus 71 -~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (488)
..+..+.+|...|.+++|+|+ ++++++++. |+.|++||+.+++.+..+...... ....
T Consensus 100 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~-~~~~--------------- 160 (351)
T 3f3f_A 100 WNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN---DGILRLYDALEPSDLRSWTLTSEM-KVLS--------------- 160 (351)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TCEEEEEECSSTTCTTCCEEEEEE-ESCS---------------
T ss_pred cceeeeecccCCceeEEEEcCCCCCcEEEEecC---CCcEEEecCCChHHhccccccccc-cccc---------------
Confidence 234556789999999999999 888777776 999999999887755443321000 0000
Q ss_pred EeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-----CCcEEEEECCCeEEE
Q psy14511 148 LHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-----YHDTLAVALDTSVYT 222 (488)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~d~~v~i 222 (488)
.........+.++.|+ +..+++++.++.+.+
T Consensus 161 --------------------------------------------~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~ 196 (351)
T 3f3f_A 161 --------------------------------------------IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIY 196 (351)
T ss_dssp --------------------------------------------CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEE
T ss_pred --------------------------------------------cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEE
Confidence 0000011112233332 456777889999988
Q ss_pred EECCCCceEEEEecCCCCCCceEEEEEcCCC----CeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCE
Q psy14511 223 WNTKTNKTQLLVEYPTYDNAYISCVAWKPRT----TDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNL 296 (488)
Q Consensus 223 w~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~ 296 (488)
|+...++......+.+ |...|++++|+|++ ++++++ +.||.|++||++.+........+......... ....
T Consensus 197 ~~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (351)
T 3f3f_A 197 QRGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQLIATG-CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDM 274 (351)
T ss_dssp EECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEEEEEE-ETTSCEEEEEEEECC-----------------------
T ss_pred EccCCCceeeeeecCC-CCcceeEEEECCCCCCcceEEEEE-cCCCeEEEEeCCCCcCccccCCcccceeccCCCccccc
Confidence 9888888766667766 89999999999998 678888 99999999999876554443333222222222 1222
Q ss_pred EEE----eecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC
Q psy14511 297 LSC----GTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD 357 (488)
Q Consensus 297 l~~----~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~ 357 (488)
+.. +.....+.+|+.... .....+.+|...|++++|+|++++|++++ |+.|++||+.+.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 275 DAQGRSDSNTEEKAELQSNLQV-ELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp ----------------CCSEEE-EEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred ccccccccccceeeeecccccc-cEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 222 233344555555443 45667888999999999999999999999 6999999998764
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1e-31 Score=250.88 Aligned_cols=302 Identities=11% Similarity=0.077 Sum_probs=224.2
Q ss_pred eecCCeEEEEEcc--cCc-ccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcc--ccccccccee
Q psy14511 11 GTIGGNILHYDVR--THS-DYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQV--NNQCHLSAVK 84 (488)
Q Consensus 11 g~~dg~i~iwd~~--~~~-~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~--~~~~h~~~v~ 84 (488)
++.++.+.||.+. ++. .....+..+ ..+.+++|+|+++++++++ ++.|++||+.+++...... .+.+|.+.|.
T Consensus 95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~ 173 (433)
T 3bws_A 95 KPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE 173 (433)
T ss_dssp SGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE
T ss_pred ccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee
Confidence 3444533445443 332 122333344 3466999999888888877 8899999998765433211 3457889999
Q ss_pred EEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccc
Q psy14511 85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKR 164 (488)
Q Consensus 85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (488)
+++|+|+++.+++.+. |+.|++||+.+++....+.
T Consensus 174 ~~~~~~~~~~~~s~~~---d~~v~~~d~~~~~~~~~~~------------------------------------------ 208 (433)
T 3bws_A 174 TISIPEHNELWVSQMQ---ANAVHVFDLKTLAYKATVD------------------------------------------ 208 (433)
T ss_dssp EEEEGGGTEEEEEEGG---GTEEEEEETTTCCEEEEEE------------------------------------------
T ss_pred EEEEcCCCEEEEEECC---CCEEEEEECCCceEEEEEc------------------------------------------
Confidence 9999999876555554 9999999987765432221
Q ss_pred cccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511 165 TVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI 244 (488)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i 244 (488)
. +...+
T Consensus 209 -------------------------------------------------------------------------~-~~~~~ 214 (433)
T 3bws_A 209 -------------------------------------------------------------------------L-TGKWS 214 (433)
T ss_dssp -------------------------------------------------------------------------C-SSSSE
T ss_pred -------------------------------------------------------------------------C-CCCCe
Confidence 1 56678
Q ss_pred EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEee--------cCCeEEEEECcCC
Q psy14511 245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGT--------IGGNILHYDVRTH 314 (488)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--------~dg~i~i~d~~~~ 314 (488)
.+++|+|+++.++++++.++.|++||+++++.+..+..+ ..+.++++ +++.+++++ .|+.|++||+.++
T Consensus 215 ~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 215 KILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred eEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 999999999999777578999999999998888887654 45888888 678888887 4889999999875
Q ss_pred CccceeeecCCccEEEEEEccCCcEEEEE-e-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCC-----
Q psy14511 315 SDYPTAITREGDVVCGLKWSPNGRYLASG-S-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQ----- 383 (488)
Q Consensus 315 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~----- 383 (488)
+ .... ..+...+.+++|+|+++.++.+ + ++.+++||+.+++....+... ..+|+|++++++++....
T Consensus 294 ~-~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 371 (433)
T 3bws_A 294 K-LIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTE 371 (433)
T ss_dssp E-EEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred c-EEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCcccc
Confidence 3 3332 3445578899999999766544 5 599999999977544333211 228999999888853222
Q ss_pred --------CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC-CCcEEEEecCC
Q psy14511 384 --------DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA-DETISIWNCFP 436 (488)
Q Consensus 384 --------~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~-dg~v~iw~~~~ 436 (488)
||.|++||+.+++.+..+.. ...+.+++|+|++++|++++. |+.|++|+++.
T Consensus 372 ~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 57999999999999888876 457999999999999998875 99999999864
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-32 Score=247.38 Aligned_cols=254 Identities=16% Similarity=0.247 Sum_probs=200.3
Q ss_pred cccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC--CCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511 73 QVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM--NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG 150 (488)
Q Consensus 73 ~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (488)
+..+.+|.+.|.+++|+|++++|++++. |+.|++||+. +++....+..+...+
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~h~~~v---------------------- 58 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPV---------------------- 58 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEET---TSCEEEEEEETTEEEEEEEECCCSSCE----------------------
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEEC---CCcEEEEecCCCcceeeeEecCCCCcE----------------------
Confidence 4457889999999999999998877776 9999999997 444444444443322
Q ss_pred eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC----CCcEEEEECCCeEEEEECC
Q psy14511 151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG----YHDTLAVALDTSVYTWNTK 226 (488)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~v~iw~~~ 226 (488)
.++.|+ ...+++++.|+.|++||+.
T Consensus 59 ---------------------------------------------------~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 59 ---------------------------------------------------WRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp ---------------------------------------------------EEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred ---------------------------------------------------EEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 223332 3567788899999999999
Q ss_pred CCceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCCcEEEEECCcce--eeeeeccccccEEEEEec---------
Q psy14511 227 TNKTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTEYIDLWHEQEER--LIQKLRTHMHQVIAMCWN--------- 293 (488)
Q Consensus 227 ~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~--------- 293 (488)
+++......... |...|.+++|+|+ ++.++++ +.|+.|++||+.... ....+..|...+.+++|.
T Consensus 88 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 88 NGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp TTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred CCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEe-cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 998555555555 8899999999999 8999999 999999999998863 445567899999999993
Q ss_pred ------CCEEEEeecCCeEEEEECcCCCc---cceeeecCCccEEEEEEccC---CcEEEEEe-cCeEEEEECCCCCCCc
Q psy14511 294 ------GNLLSCGTIGGNILHYDVRTHSD---YPTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKR 360 (488)
Q Consensus 294 ------~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~i~~~~~s~~---~~~l~~~~-d~~i~iwd~~~~~~~~ 360 (488)
++.+++++.||.|++||++.... ....+..|...|.+++|+|+ +++|++++ |+.|++||+++.....
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 245 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW 245 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc
Confidence 68999999999999999987542 34567789999999999999 89999998 6899999987542100
Q ss_pred ccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511 361 PLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 361 ~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
...+.....|...|++++|+|++++|++++.||.|++|++....
T Consensus 246 ----------------------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 246 ----------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp ----------------------------------EEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred ----------------------------------eeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 00111223478899999999999999999999999999998543
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.3e-31 Score=239.49 Aligned_cols=274 Identities=11% Similarity=0.120 Sum_probs=185.4
Q ss_pred EEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccccc
Q psy14511 61 IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKK 140 (488)
Q Consensus 61 vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (488)
||++.+ ..++.....|...|.+++|+||+++++ ++. +..+++|++.+++........ ..
T Consensus 3 i~s~~~---~~~~~~~~~h~~~V~~v~fs~dg~~la-~g~---~~~~~iw~~~~~~~~~~~~~~--~~------------ 61 (355)
T 3vu4_A 3 LGSMIT---RNPIVPENHVSNPVTDYEFNQDQSCLI-LST---LKSFEIYNVHPVAHIMSQEMR--HL------------ 61 (355)
T ss_dssp -------------------CCCCCEEEECTTSSEEE-EEC---SSEEEEEEETTEEEEEEEECS--CC------------
T ss_pred cccccc---cCCccccccCCCceEEEEECCCCCEEE-EEc---CCEEEEEecCCcceeeeeecC--Ce------------
Confidence 455544 334445678999999999999998655 555 456899998877654332211 00
Q ss_pred ceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcE-EEEECCCe
Q psy14511 141 RRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDT-LAVALDTS 219 (488)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~ 219 (488)
....+.++.+.+ ++++.++.
T Consensus 62 -----------------------------------------------------------~~~~~~~~~~~~~~~~~~d~~ 82 (355)
T 3vu4_A 62 -----------------------------------------------------------SKVRMLHRTNYVAFVTGVKEV 82 (355)
T ss_dssp -----------------------------------------------------------CEEEECTTSSEEEEECSSTTE
T ss_pred -----------------------------------------------------------EEEEEcCCCCEEEEEECCccE
Confidence 011122223344 44557889
Q ss_pred EEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc-eeeeeeccccccEEEEEecCCEEE
Q psy14511 220 VYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCWNGNLLS 298 (488)
Q Consensus 220 v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~l~ 298 (488)
|++||..+++....+. +...|.+++++++. ++++ .++.|++||+.++ +.+..+.. ...+.+++ ...++
T Consensus 83 v~iWd~~~~~~~~~~~----~~~~v~~v~~~~~~--~~~~--~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s--~~~la 151 (355)
T 3vu4_A 83 VHIWDDVKKQDVSRIK----VDAPVKDLFLSREF--IVVS--YGDVISVFKFGNPWKRITDDIR-FGGVCEFS--NGLLV 151 (355)
T ss_dssp EEEEETTTTEEEEEEE----CSSCEEEEEECSSE--EEEE--ETTEEEEEESSTTCCBSSCCEE-EEEEEEEE--TTEEE
T ss_pred EEEEECCCCcEEEEEE----CCCceEEEEEcCCE--EEEE--EcCEEEEEECCCCceeeEEecc-CCceEEEE--ccEEE
Confidence 9999999998877766 55689999998864 4444 4789999999987 66666655 33334443 36666
Q ss_pred E--eecCCeEEEEECcCCC--------------cc-ceeeecCCccEEEEEEccCCcEEEEEe-cCe-EEEEECCCCCCC
Q psy14511 299 C--GTIGGNILHYDVRTHS--------------DY-PTAITREGDVVCGLKWSPNGRYLASGS-NNT-VKIWDFRQLDAK 359 (488)
Q Consensus 299 ~--~~~dg~i~i~d~~~~~--------------~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~-i~iwd~~~~~~~ 359 (488)
+ |+.+|.|++||++++. .+ ...+.+|..+|.+++|+|+|++|++++ |++ |++||+
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~------ 225 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKT------ 225 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEET------
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEEC------
Confidence 6 6899999999998753 12 677889999999999999999999886 354 555554
Q ss_pred cccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-e-ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511 360 RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-I-HQERILSAVLSPDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 360 ~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
.+++++.++. + |...|++++|+||+++|++++.|+.|++||+..+
T Consensus 226 ---------------------------------~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 226 ---------------------------------EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp ---------------------------------TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred ---------------------------------CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 4556677777 5 9999999999999999999999999999999876
Q ss_pred Cccccc------------------------cccCCcceEEeecCCCceEEE
Q psy14511 438 DKKRKA------------------------RQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 438 ~~~~~~------------------------~~~~~v~~~~~s~~~~~~~~~ 464 (488)
...... ....+...++|+++++.+...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~ 323 (355)
T 3vu4_A 273 QDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVW 323 (355)
T ss_dssp SCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEE
T ss_pred CCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEE
Confidence 432110 011223678999998877554
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-32 Score=252.23 Aligned_cols=253 Identities=12% Similarity=0.047 Sum_probs=170.1
Q ss_pred EEEccCCcEEEEec-CCeEEEEeccccCcC--CCcccccccccceeEEEEec--------CCCeEEeeeCCcccceEEEE
Q psy14511 42 LKWSPNGRYLASGS-NNTVKIWDFRQLDAK--RPQVNNQCHLSAVKAIAWCP--------WEPTLLATGGGICDQTVRLW 110 (488)
Q Consensus 42 l~~sp~g~~las~~-d~~i~vwd~~~~~~~--~~~~~~~~h~~~v~~l~~~~--------~~~~l~~~~~~~~d~~i~vw 110 (488)
..+++++++||+++ |++|+|||.++++.. ..+..+.+|.+.|++++|+| |++.|++++. |++|++|
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~---D~tv~~W 171 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD---DCTLIIW 171 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET---TSEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC---CCeEEEE
Confidence 34445677899998 999999999875432 23456789999999999998 6766666655 9999999
Q ss_pred ecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceee
Q psy14511 111 NSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL 190 (488)
Q Consensus 111 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (488)
|+.++.+...+..
T Consensus 172 d~~~~~~~~~~~~------------------------------------------------------------------- 184 (393)
T 4gq1_A 172 RLTDEGPILAGYP------------------------------------------------------------------- 184 (393)
T ss_dssp EEETTEEEEEEEE-------------------------------------------------------------------
T ss_pred ECCCCceeeeecC-------------------------------------------------------------------
Confidence 9876654322211
Q ss_pred cCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCC-eEEEEeCCCCcEEEE
Q psy14511 191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTT-DLAVTNTCTEYIDLW 269 (488)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~ 269 (488)
|..++.+++|+|++. +|+++ +.|+.|++|
T Consensus 185 -------------------------------------------------~~~~v~~v~~~p~~~~~l~~~-~~d~~v~~w 214 (393)
T 4gq1_A 185 -------------------------------------------------LSSPGISVQFRPSNPNQLIVG-ERNGNIRIF 214 (393)
T ss_dssp -------------------------------------------------CSSCEEEEEEETTEEEEEEEE-ETTSEEEEE
T ss_pred -------------------------------------------------CCCCcEEEEECCCCCceEEec-CCCCEEEEE
Confidence 566788888888775 45555 888888888
Q ss_pred ECCcceeeee-------------------------eccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceee
Q psy14511 270 HEQEERLIQK-------------------------LRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAI 321 (488)
Q Consensus 270 d~~~~~~~~~-------------------------~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 321 (488)
|+++++.... ..+|...+.++.| +++.+++++.|+.+++||+.... ....+
T Consensus 215 d~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~-~~~~l 293 (393)
T 4gq1_A 215 DWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN-DYNEI 293 (393)
T ss_dssp ETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------
T ss_pred ECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC-CCceE
Confidence 8876543322 2356677788887 68999999999999999998753 55666
Q ss_pred ecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecC-CCCEEEEEccCCCCeEEEEeCCCcceeEE
Q psy14511 322 TREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKR-EGRELVTSHGKQDCSLKMWEYPRLHLIEE 400 (488)
Q Consensus 322 ~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g~~~~~i~i~d~~~~~~~~~ 400 (488)
..|...+..+.+.|+.+.+...... ....++| .+..++++ |+.|+.|++||+.+++.+..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~s-gs~Dg~V~lwd~~~~~~~~~ 354 (393)
T 4gq1_A 294 SDSTMKLGPKNLLPNVQGISLFPSL------------------LGACPHPRYMDYFATA-HSQHGLIQLINTYEKDSNSI 354 (393)
T ss_dssp ----------CCSCSEEEECSSCCS------------------SCCEECSSCTTEEEEE-ETTTTEEEEEETTCTTCCEE
T ss_pred eeecCccccEEEccccccccccCcc------------------eeEEEccCCCCEEEEE-ECCCCEEEEEECCCCcEEEE
Confidence 7777778888888876544322210 0112333 33333332 88999999999999999999
Q ss_pred EeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511 401 LKIHQERILSAVLSPDQTCVAAASADETISIWNCF 435 (488)
Q Consensus 401 ~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~ 435 (488)
+.+|..+|.+++|||||++||+++.|| +.+|.+.
T Consensus 355 ~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 355 PIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 999999999999999999999999776 6666654
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=8.4e-32 Score=231.05 Aligned_cols=267 Identities=10% Similarity=0.033 Sum_probs=182.7
Q ss_pred EEEeecCCeEEEEEcccCc--ccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeE
Q psy14511 8 LSCGTIGGNILHYDVRTHS--DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKA 85 (488)
Q Consensus 8 la~g~~dg~i~iwd~~~~~--~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~ 85 (488)
+++++ ...|++|+..+.. ...+.+.+|..+|..+.+.||-.-|+... +- .-|...|++
T Consensus 57 ~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------~~-----------~~~~~~v~s 116 (356)
T 2w18_A 57 IITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVA--------LG-----------NLEIREIRA 116 (356)
T ss_dssp EEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEE--------EC-----------SSSEEEEEE
T ss_pred EEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeee--------ec-----------cccccceEE
Confidence 45555 7789999999873 24567889999999999999865443221 10 114578999
Q ss_pred EEEecC----CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 86 IAWCPW----EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 86 l~~~~~----~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
++|+|| ++.+++.+. .+++|++.+++
T Consensus 117 la~spd~~~~~~~l~s~g~-----~~~v~~l~~g~--------------------------------------------- 146 (356)
T 2w18_A 117 LFCSSDDESEKQVLLKSGN-----IKAVLGLTKRR--------------------------------------------- 146 (356)
T ss_dssp ECC------CCEEEEEEEE-----EEEEEEETTTE---------------------------------------------
T ss_pred EEECCCccccccEEEeCCC-----eEEEEecCCCc---------------------------------------------
Confidence 999999 877766543 48889886554
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE---CCCeEEEEEC-CCCceEEEEecC
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA---LDTSVYTWNT-KTNKTQLLVEYP 237 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~v~iw~~-~~~~~~~~~~~~ 237 (488)
++..+ .|+.|++|++ .+++.......
T Consensus 147 -------------------------------------------------lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~- 176 (356)
T 2w18_A 147 -------------------------------------------------LVSSSGTLSDQQVEVMTFAEDGGGKENQFL- 176 (356)
T ss_dssp -------------------------------------------------EEEEESSSTTCEEEEEEECTTSCEEEEEEE-
T ss_pred -------------------------------------------------EEEecccCCCCcEEEEEECCCCceeeeecc-
Confidence 33433 4899999999 44776665554
Q ss_pred CCCCCceEEEEEcC---CCCeEEEEeCCCCcEEEEECCcceeeeeeccccc---cEEEEEe--cCCEEEEeecCCeEEEE
Q psy14511 238 TYDNAYISCVAWKP---RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH---QVIAMCW--NGNLLSCGTIGGNILHY 309 (488)
Q Consensus 238 ~~~~~~i~~~~~~~---~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~--~~~~l~~~~~dg~i~i~ 309 (488)
|...++.++|+| ++..|+++ +.|++|++||++++++++++.+|.. .+.+++| ++.++++++.+.. +|
T Consensus 177 --~~~~v~~l~fs~~~g~~~~LaSg-S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w 251 (356)
T 2w18_A 177 --MPPEETILTFAEVQGMQEALLGT-TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KE 251 (356)
T ss_dssp --CCCSSCEEEEEEEETSTTEEEEE-ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------
T ss_pred --CCCceeeEEeeccCCCCceEEEe-cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cc
Confidence 777888888888 77888888 9999999999999999998876432 2222233 3333333332110 01
Q ss_pred ECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCC------------CCEE
Q psy14511 310 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKRE------------GREL 376 (488)
Q Consensus 310 d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~------------~~~l 376 (488)
.+++++ |+++++||..+++... .....+ |+ +..+
T Consensus 252 -----------------------------~laSGs~D~tIklWd~~tgk~l~---v~~~~~-p~Gh~~~~lsg~~sg~~l 298 (356)
T 2w18_A 252 -----------------------------SESLRSPVFQLIVINPKTTLSVG---VMLYCL-PPGQAGRFLEGDVKDHCA 298 (356)
T ss_dssp -----------------------------------CCEEEEEEETTTTEEEE---EEEECC-CTTCCCCEEEEEEETTEE
T ss_pred -----------------------------eeeccCCCcEEEEEECCCCEEEE---EEEeec-cCCCcceeEccccCCCEE
Confidence 235666 5889999988774322 111111 32 3455
Q ss_pred EEEccCCCCeEEEEeCCCcceeEEEeeccccEE-EEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511 377 VTSHGKQDCSLKMWEYPRLHLIEELKIHQERIL-SAVLSPDQTCVAAASADETISIWNC 434 (488)
Q Consensus 377 ~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~t~~~dg~v~iw~~ 434 (488)
++ ++.|++|+|||+.+++++.++.+|...+. .++|||||++|++|+.|++|+|||+
T Consensus 299 AS--gS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 299 AA--ILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EE--EETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EE--EcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 66 78999999999999999999999987655 5899999999999999999999996
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=8.4e-33 Score=253.61 Aligned_cols=254 Identities=11% Similarity=0.097 Sum_probs=172.9
Q ss_pred cCCceEEEeecCCeEEEEEcccCccc----ceeecccCceEEEEEEcc--------CCcEEEEec-CCeEEEEeccccCc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSDY----PTAITREGDVVCGLKWSP--------NGRYLASGS-NNTVKIWDFRQLDA 69 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~~----~~~~~~h~~~V~~l~~sp--------~g~~las~~-d~~i~vwd~~~~~~ 69 (488)
.++++||+|+.|++|+|||+.+++.. ...+.+|.+.|.+++|+| |+++||+++ |++|+|||+.++.
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~- 177 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG- 177 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-
Confidence 36789999999999999999887543 234689999999999998 899999999 9999999997643
Q ss_pred CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEe
Q psy14511 70 KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLH 149 (488)
Q Consensus 70 ~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (488)
++..+.+|..+|.+++|+|++..++++++. |++|++||+.+++................+.+..
T Consensus 178 --~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~--d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~------------ 241 (393)
T 4gq1_A 178 --PILAGYPLSSPGISVQFRPSNPNQLIVGER--NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNT------------ 241 (393)
T ss_dssp --EEEEEEECSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCCC----------CSCCCSEEEES------------
T ss_pred --eeeeecCCCCCcEEEEECCCCCceEEecCC--CCEEEEEECCCCcccccccccCCcccceEEeccc------------
Confidence 344456788999999999998765666653 9999999999887654433321111110000000
Q ss_pred eeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCc
Q psy14511 150 GFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229 (488)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~ 229 (488)
..
T Consensus 242 -------------------------------------------------------------------~~----------- 243 (393)
T 4gq1_A 242 -------------------------------------------------------------------LP----------- 243 (393)
T ss_dssp -------------------------------------------------------------------GG-----------
T ss_pred -------------------------------------------------------------------cc-----------
Confidence 00
Q ss_pred eEEEEecCCCCCCceEEEEEc-CCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe----------------
Q psy14511 230 TQLLVEYPTYDNAYISCVAWK-PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---------------- 292 (488)
Q Consensus 230 ~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---------------- 292 (488)
........+ +...+.++.|+ |+++.++++ +.|+.+++||+..++....+..|...+..+.+
T Consensus 244 ~~~~~~~~~-~~~~v~~v~~~~~dg~~l~s~-s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
T 4gq1_A 244 LVNTCHSSG-IASSLANVRWIGSDGSGILAM-CKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGA 321 (393)
T ss_dssp GC------C-CSSSCSEEEEETTTTCEEEEE-CTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCC
T ss_pred ceeeeeccc-ccccceeeeeecCCCCEEEEE-eCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeE
Confidence 000011112 77788899886 799999998 99999999999887766666555444433221
Q ss_pred ------cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511 293 ------NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR 354 (488)
Q Consensus 293 ------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~ 354 (488)
++.++++|+.||.|++||+.++. .......|..+|.+++|+|||++||+++++.+.+|.+.
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~-~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKD-SNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTT-CCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCc-EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 23467788899999999999864 56667778889999999999999999998888888765
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-32 Score=271.47 Aligned_cols=247 Identities=18% Similarity=0.280 Sum_probs=196.3
Q ss_pred eeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecC--CCeEEeeeCCcccce
Q psy14511 30 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW--EPTLLATGGGICDQT 106 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~~~~~~~~d~~ 106 (488)
..+.+|.+.|++++|+|+|++|++|+ ||.|+|||+.++. ...+..+.+|.++|.+++|+|+ ++++++++. ||.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~---Dg~ 78 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK 78 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-EEEEEEECCCSSCEEEEEECCTTSCSEEEEEET---TSC
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-CccceeccCCcCceEEEEecCCCCCCEEEEEeC---CCe
Confidence 45789999999999999999999998 9999999997422 3445567889999999999988 877777776 999
Q ss_pred EEEEecCCCe--eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccC
Q psy14511 107 VRLWNSMNGK--EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKA 184 (488)
Q Consensus 107 i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
|++||+.+++ ....+..+...+.
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~------------------------------------------------------- 103 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVN------------------------------------------------------- 103 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEE-------------------------------------------------------
T ss_pred EEEEECCCCcccccccccCCCCCeE-------------------------------------------------------
Confidence 9999998876 3333333322222
Q ss_pred CCceeecCCCccccceeeeeeeC----CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC---------
Q psy14511 185 KPERILEAPSIINDFYTSGLDWG----YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP--------- 251 (488)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------- 251 (488)
++.|+ +..+++++.||.|++||+.++.........+ |...|.+++|+|
T Consensus 104 ------------------~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~-~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 104 ------------------SVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp ------------------EEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC-CSSCEEEEEECCCC-------
T ss_pred ------------------EEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec-CCCceEEEEecCccccccccc
Confidence 23333 3467888899999999999885444444444 889999999999
Q ss_pred ----CCCeEEEEeCCCCcEEEEECCcc----eeeeeeccccccEEEEEe--c---CCEEEEeecCCeEEEEECcCCCc--
Q psy14511 252 ----RTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHMHQVIAMCW--N---GNLLSCGTIGGNILHYDVRTHSD-- 316 (488)
Q Consensus 252 ----~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~--~---~~~l~~~~~dg~i~i~d~~~~~~-- 316 (488)
+++.++++ +.||.|++||++++ .....+.+|...|.+++| + ++++++++.||.|++||++++..
T Consensus 165 ~~~~d~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~ 243 (753)
T 3jro_A 165 NGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW 243 (753)
T ss_dssp --CGGGCCEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC
T ss_pred ccCCCCCEEEEE-ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc
Confidence 58889998 99999999999876 566778899999999999 4 78999999999999999987532
Q ss_pred --cceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511 317 --YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ 355 (488)
Q Consensus 317 --~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~ 355 (488)
.......|...|.+++|+|++++|++++ ||.|++||+..
T Consensus 244 ~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 2333455888899999999999999998 69999999984
No 120
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1e-30 Score=247.96 Aligned_cols=330 Identities=14% Similarity=0.117 Sum_probs=243.1
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeec-ccCceEEEEEEccCCcEEEEec-CCeEEEEec--cccCcCCCccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGS-NNTVKIWDF--RQLDAKRPQVNNQ 77 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~-~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~--~~~~~~~~~~~~~ 77 (488)
++++.++++++.|++|.+||..+++.+ ..+. +|. +.+++|+|||++|++++ |+.|.+||+ .+++ .+..+.
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~-~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~---~~~~i~ 219 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIV-KVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT---KVAEIK 219 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEE-EEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE---EEEEEE
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEE-EEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCc---EEEEEe
Confidence 457889999999999999999998865 4454 554 89999999999999998 999999999 5543 333344
Q ss_pred ccccceeEEEEec----CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511 78 CHLSAVKAIAWCP----WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153 (488)
Q Consensus 78 ~h~~~v~~l~~~~----~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (488)
+...+..++|+| ||+++++++.. +++|.+||..+++.+..+...........+.+
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~------------------ 278 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHP------------------ 278 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEEEEECCEECSSSCCEES------------------
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEcc--CCeEEEEeccccccceeecccCcccCcccccc------------------
Confidence 345689999999 99998888753 89999999999988777654311100000000
Q ss_pred cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEE-EEECCCeEEEEECCCCce
Q psy14511 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTL-AVALDTSVYTWNTKTNKT 230 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~d~~v~iw~~~~~~~ 230 (488)
...+..+.++ ...++ +...++.|.+||..+.+.
T Consensus 279 --------------------------------------------~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~ 314 (543)
T 1nir_A 279 --------------------------------------------EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN 314 (543)
T ss_dssp --------------------------------------------CCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS
T ss_pred --------------------------------------------CCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc
Confidence 0011122222 23333 344789999999988765
Q ss_pred EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc----ccccEEEEEe-c-CCEEEEee-cC
Q psy14511 231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT----HMHQVIAMCW-N-GNLLSCGT-IG 303 (488)
Q Consensus 231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~-~-~~~l~~~~-~d 303 (488)
....... +...+..++|+|+++++++++..+++|.+||..+++++..+.. |.+....+.. + +..++++. .|
T Consensus 315 l~~~~i~--~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d 392 (543)
T 1nir_A 315 LTVTSIG--AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD 392 (543)
T ss_dssp CEEEEEE--CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS
T ss_pred ceeEEec--cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC
Confidence 4433332 4556888999999999887757789999999999998888764 5444444433 4 56666665 57
Q ss_pred CeEEEEECcCC------CccceeeecCCccEEEEEEccCCcEEEEEe--------cCeEEEEECCCCCCC-ccc------
Q psy14511 304 GNILHYDVRTH------SDYPTAITREGDVVCGLKWSPNGRYLASGS--------NNTVKIWDFRQLDAK-RPL------ 362 (488)
Q Consensus 304 g~i~i~d~~~~------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------d~~i~iwd~~~~~~~-~~~------ 362 (488)
++|.+||+.+. .+.+..+..|...+..++++|++++|++++ +++|.+||+.+.+.. ..+
T Consensus 393 ~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~ 472 (543)
T 1nir_A 393 GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWA 472 (543)
T ss_dssp SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHH
T ss_pred ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhc
Confidence 99999999872 246778888888888999999999999987 479999999988765 222
Q ss_pred -------ceeeeeecCCCCEEEEEcc---CCCCeEEEEeCCCcceeEEEeec
Q psy14511 363 -------GLIVPKLKREGRELVTSHG---KQDCSLKMWEYPRLHLIEELKIH 404 (488)
Q Consensus 363 -------~~~~~~~~~~~~~l~~~~g---~~~~~i~i~d~~~~~~~~~~~~~ 404 (488)
......|+|+|+.++++.. +.++.|.|||.++++++.+++.+
T Consensus 473 ~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 473 DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 524 (543)
T ss_dssp CCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred ccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence 1112299999999998643 45899999999999999988754
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=241.94 Aligned_cols=260 Identities=10% Similarity=0.050 Sum_probs=189.2
Q ss_pred cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccC------cCCCccc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD------AKRPQVN 75 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~------~~~~~~~ 75 (488)
.|+++||+|+.||+|++||+.+++.+.. +. ...|.++.|+|+ +++++ |++|++|+..... ....+..
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~-~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITT-IT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEE-EE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEE-Ee--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 3789999999999999999999885533 33 467888999998 88887 9999999876311 1111212
Q ss_pred -ccccccceeEEEEec--CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511 76 -NQCHLSAVKAIAWCP--WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE 152 (488)
Q Consensus 76 -~~~h~~~v~~l~~~~--~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (488)
..+|.+.|.+++|+| +++++++++. |++|++||+++++.......+
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~---dg~i~~wd~~~~~~~~~~~~~---------------------------- 168 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADN---RGTIGFQSYEDDSQYIVHSAK---------------------------- 168 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEET---TCCEEEEESSSSCEEEEECCC----------------------------
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeC---CCcEEEEECCCCcEEEEEecC----------------------------
Confidence 225668999999999 9988777776 999999999877642211110
Q ss_pred ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEE
Q psy14511 153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQL 232 (488)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~ 232 (488)
T Consensus 169 -------------------------------------------------------------------------------- 168 (343)
T 3lrv_A 169 -------------------------------------------------------------------------------- 168 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee-eeecc-ccccEEEEEe--cCCEEEEeecCCeEEE
Q psy14511 233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI-QKLRT-HMHQVIAMCW--NGNLLSCGTIGGNILH 308 (488)
Q Consensus 233 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i 308 (488)
+...+.+++|+|++.+++++ +.||.|++||+++++.+ ..+.. |..+|.+++| ++.+|++++ ++.|++
T Consensus 169 -------~~~~i~~~~~~pdg~~lasg-~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~i 239 (343)
T 3lrv_A 169 -------SDVEYSSGVLHKDSLLLALY-SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVC 239 (343)
T ss_dssp -------SSCCCCEEEECTTSCEEEEE-CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEE
T ss_pred -------CCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEE
Confidence 45568999999999999999 99999999999998877 77887 9999999999 688999999 559999
Q ss_pred EECcCCCccceeee---cCCccEE--EEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccc-eeeeeecC---CCCEEE
Q psy14511 309 YDVRTHSDYPTAIT---REGDVVC--GLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLG-LIVPKLKR---EGRELV 377 (488)
Q Consensus 309 ~d~~~~~~~~~~~~---~~~~~i~--~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~~---~~~~l~ 377 (488)
||+++... ...+. .|...+. +++|+|+|++|++++ ++.+++|++.+....-... .....|++ +.+.++
T Consensus 240 wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 318 (343)
T 3lrv_A 240 FDLRKDVG-TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMD 318 (343)
T ss_dssp EETTSSTT-CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEE
T ss_pred EEcCCCCc-ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeE
Confidence 99998643 22222 2333343 699999999999966 6999999997653221111 11226666 666776
Q ss_pred EEccCCCCeEEEEe
Q psy14511 378 TSHGKQDCSLKMWE 391 (488)
Q Consensus 378 ~~~g~~~~~i~i~d 391 (488)
+ ++.|+.+.++-
T Consensus 319 ~--~~~d~~~~~~~ 330 (343)
T 3lrv_A 319 V--VCGDGGIAAIL 330 (343)
T ss_dssp E--EEETTEEEEEE
T ss_pred E--EecCCceEEEE
Confidence 6 45566666553
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=7.7e-30 Score=234.77 Aligned_cols=266 Identities=11% Similarity=0.119 Sum_probs=207.0
Q ss_pred cEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCc
Q psy14511 49 RYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQ 127 (488)
Q Consensus 49 ~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 127 (488)
.++++++ |+.|++||+.+++. +..+..| ..+.+++|+|++++++++++. |+.|++||+.+++.+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~---~~~~~~~-~~~~~~~~s~dg~~l~~~~~~--d~~i~v~d~~~~~~~~~~~----- 71 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV---TATIPVG-SNPMGAVISPDGTKVYVANAH--SNDVSIIDTATNNVIATVP----- 71 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE---EEEEECS-SSEEEEEECTTSSEEEEEEGG--GTEEEEEETTTTEEEEEEE-----
T ss_pred EEEEEcCCCCEEEEEECCCCeE---EEEeecC-CCcceEEECCCCCEEEEECCC--CCeEEEEECCCCeEEEEEE-----
Confidence 4567776 99999999987543 3334445 458999999999988777753 9999999998776432221
Q ss_pred cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC
Q psy14511 128 ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG 207 (488)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (488)
T Consensus 72 -------------------------------------------------------------------------------- 71 (391)
T 1l0q_A 72 -------------------------------------------------------------------------------- 71 (391)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE
Q psy14511 208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV 287 (488)
Q Consensus 208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v 287 (488)
....+.+++|+|+++++++++..++.|++||+.+++.+..+..+ ..+
T Consensus 72 --------------------------------~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~ 118 (391)
T 1l0q_A 72 --------------------------------AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSP 118 (391)
T ss_dssp --------------------------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSE
T ss_pred --------------------------------CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCc
Confidence 22378999999999998877577899999999999888877654 467
Q ss_pred EEEEe--cCCEE-EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEE-EEe-cCeEEEEECCCCCCCccc
Q psy14511 288 IAMCW--NGNLL-SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA-SGS-NNTVKIWDFRQLDAKRPL 362 (488)
Q Consensus 288 ~~~~~--~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~-d~~i~iwd~~~~~~~~~~ 362 (488)
.+++| +++.+ ++++.++.|++||+.+++ ....+..+. .+..++|+|++++|+ +++ ++.|++||+++.+....+
T Consensus 119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 196 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKA-VINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV 196 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 88888 57766 788889999999998753 445555544 468999999999885 445 499999999887544333
Q ss_pred cee----eeeecCCCCEEEEEccC-CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE-EEEeCCCcEEEEecCC
Q psy14511 363 GLI----VPKLKREGRELVTSHGK-QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV-AAASADETISIWNCFP 436 (488)
Q Consensus 363 ~~~----~~~~~~~~~~l~~~~g~-~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~t~~~dg~v~iw~~~~ 436 (488)
... ..+|+|++++++++... .++.|++||+.+++.+..+..|.. +.+++|+|++++| ++++.|+.|++||+.+
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 211 22899999999985211 689999999999999888887654 7899999999987 6778899999999998
Q ss_pred CCccc
Q psy14511 437 RDKKR 441 (488)
Q Consensus 437 ~~~~~ 441 (488)
++...
T Consensus 276 ~~~~~ 280 (391)
T 1l0q_A 276 NTITA 280 (391)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 87663
No 123
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=6e-30 Score=263.43 Aligned_cols=409 Identities=11% Similarity=0.051 Sum_probs=276.0
Q ss_pred cCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C------CeEEEEeccccCcCCCccc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N------NTVKIWDFRQLDAKRPQVN 75 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d------~~i~vwd~~~~~~~~~~~~ 75 (488)
|.|+.||..+. +.|.+|++..++ ...+.+|...+.+++|||||++||+++ + ..|++||+.+++ ...
T Consensus 22 ~S~~~iaf~~~-~~l~~~~~~gg~--~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~----~~~ 94 (1045)
T 1k32_A 22 IHGDRIIFVCC-DDLWEHDLKSGS--TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE----IKR 94 (1045)
T ss_dssp EETTEEEEEET-TEEEEEETTTCC--EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE----EEE
T ss_pred EeCCEEEEEEC-CcEEEEECCCCc--EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC----eEE
Confidence 35778888764 789999998776 356788999999999999999999885 3 489999998754 233
Q ss_pred ccccccce-------eEEEEecCCCeEEeeeCCc----ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeE
Q psy14511 76 NQCHLSAV-------KAIAWCPWEPTLLATGGGI----CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHL 144 (488)
Q Consensus 76 ~~~h~~~v-------~~l~~~~~~~~l~~~~~~~----~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (488)
+..|...+ ..++|+|||+ +++++... ....|..|++.++......... .....+++ . .+
T Consensus 95 lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~~~~~~sp-----G-~l 164 (1045)
T 1k32_A 95 ITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGP---ATHILFAD-----G-RR 164 (1045)
T ss_dssp CCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCS---CSEEEEET-----T-EE
T ss_pred cccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCC---cceeeeCC-----C-EE
Confidence 56688888 9999999998 55555420 1246888888777653322221 11222222 1 11
Q ss_pred EEEEeeeec---------cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEE-
Q psy14511 145 SFLLHGFEI---------DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAV- 214 (488)
Q Consensus 145 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 214 (488)
......... ....++..... .....+ ......+..+.|+++.++..
T Consensus 165 ~~~~~~~~~~~~~~~~g~~~~~lw~~~~~--------------------~~~~~l----~~~~~~v~~~~~s~d~l~~~~ 220 (1045)
T 1k32_A 165 VIGRNTFELPHWKGYRGGTRGKIWIEVNS--------------------GAFKKI----VDMSTHVSSPVIVGHRIYFIT 220 (1045)
T ss_dssp EEEESCSCCTTSTTCCSTTCCEEEEEEET--------------------TEEEEE----ECCSSCCEEEEEETTEEEEEE
T ss_pred EEeccCCCccccccccCCCcCCEEEECCC--------------------CCeEEC----cCCCCcccceEEeCCEEEEEE
Confidence 111110000 00111110000 000000 01112233456666655544
Q ss_pred ECCCeEEEEECCC-CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-----------
Q psy14511 215 ALDTSVYTWNTKT-NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT----------- 282 (488)
Q Consensus 215 ~~d~~v~iw~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~----------- 282 (488)
..++.+.+|.+.. +.....+.. +. .+...+|+|+|+.++++ .++.|.+|++... .+..+..
T Consensus 221 ~~dg~~~l~~~~~~g~~~~~l~~---~~-~~~~~~~SpDG~~la~~--~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~ 293 (1045)
T 1k32_A 221 DIDGFGQIYSTDLDGKDLRKHTS---FT-DYYPRHLNTDGRRILFS--KGGSIYIFNPDTE-KIEKIEIGDLESPEDRII 293 (1045)
T ss_dssp CTTSSCEEEEEETTSCSCEECCC---CC-SSCEEEEEESSSCEEEE--ETTEEEEECTTTC-CEEECCCCCCCBCCSEEE
T ss_pred eccCceEEEEEeCCCCcceEecC---CC-CcceeeEcCCCCEEEEE--eCCEEEEecCCce-EeeeeccCcccccccccc
Confidence 4678888887643 222222221 22 45677999999999888 4899999998543 3334443
Q ss_pred ccccEEE--EE-ecCCEEEEeecCCeEEEEECcCCCccceeeecCCc-cEEEEEEccCCcEEEEEec-CeEE-EEECCCC
Q psy14511 283 HMHQVIA--MC-WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VVCGLKWSPNGRYLASGSN-NTVK-IWDFRQL 356 (488)
Q Consensus 283 ~~~~v~~--~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~d-~~i~-iwd~~~~ 356 (488)
|...+.+ ++ .+|+.+++++ ++.+++|++..+. ...+..|.. .+..++|+ ||+.|+++++ +.+. +||+...
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 2223444 45 5678888877 8899999998653 334556666 89999999 9999999885 7888 8998866
Q ss_pred CCCcccc----eeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC-----
Q psy14511 357 DAKRPLG----LIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE----- 427 (488)
Q Consensus 357 ~~~~~~~----~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg----- 427 (488)
+...... ....+|+|||+++++ ++.++.|++||+.+++....+.+|...+.+++|||||++|++++.++
T Consensus 370 ~~~~l~~~~~~~~~~~~SpDG~~la~--~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 370 KAEKFEENLGNVFAMGVDRNGKFAVV--ANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp CEEECCCCCCSEEEEEECTTSSEEEE--EETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred CceEecCCccceeeeEECCCCCEEEE--ECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence 4322221 112399999999998 57789999999999998888878999999999999999999887654
Q ss_pred -----cEEEEecCCCCccccccccCCcceEEeecCCCceEEEE
Q psy14511 428 -----TISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTA 465 (488)
Q Consensus 428 -----~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 465 (488)
.|++||+.+++......+...+..++|+|||+.+....
T Consensus 448 ~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp SCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred CCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEe
Confidence 89999999988666667777788999999999876543
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=4.4e-30 Score=238.78 Aligned_cols=200 Identities=17% Similarity=0.282 Sum_probs=160.5
Q ss_pred CCCceEEEEEcCCCC-eEEEEeCCCCcEEEEECCccee-------eeeeccccccEEEEEe---cCCEEEEeecCCeEEE
Q psy14511 240 DNAYISCVAWKPRTT-DLAVTNTCTEYIDLWHEQEERL-------IQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILH 308 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~-~l~~~~~~~~~i~i~d~~~~~~-------~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i 308 (488)
|...+.+++|+|++. .|+++ +.||.|++|++..+.. ...+..|...|.+++| ++.++++++.||.|++
T Consensus 180 h~~~v~~l~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i 258 (430)
T 2xyi_A 180 HQKEGYGLSWNPNLNGYLLSA-SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI 258 (430)
T ss_dssp CSSCCCCEEECTTSTTEEEEE-CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CCCCeEEEEeCCCCCCeEEEE-eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEE
Confidence 788899999999998 78877 9999999999987322 4556789999999999 4689999999999999
Q ss_pred EECcCCC--ccceeeecCCccEEEEEEccCCc-EEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCC
Q psy14511 309 YDVRTHS--DYPTAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQD 384 (488)
Q Consensus 309 ~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 384 (488)
||+++.. .....+..|...|++++|+|+++ +|++++ |+.|++||+++.
T Consensus 259 ~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~---------------------------- 310 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---------------------------- 310 (430)
T ss_dssp EETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT----------------------------
T ss_pred EECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC----------------------------
Confidence 9999763 46667789999999999999987 677776 477777777643
Q ss_pred CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-EEEEEeCCCcEEEEecCCCC--------------cc-ccccccCC
Q psy14511 385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-CVAAASADETISIWNCFPRD--------------KK-RKARQVGS 448 (488)
Q Consensus 385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~~~dg~v~iw~~~~~~--------------~~-~~~~~~~~ 448 (488)
.+++..+.+|...|++++|+|+++ +|++++.||.|++||+.... .. ....|...
T Consensus 311 ----------~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 380 (430)
T 2xyi_A 311 ----------KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK 380 (430)
T ss_dssp ----------TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSC
T ss_pred ----------CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCC
Confidence 235667788999999999999985 69999999999999998722 22 34567888
Q ss_pred cceEEeecCCCceEEEEeeecccccceeeEEEEeec
Q psy14511 449 GSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYTVF 484 (488)
Q Consensus 449 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 484 (488)
+.+++|+|++..+. +.+..+..+.||....
T Consensus 381 v~~~~~~p~~~~~l------~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 381 ISDFSWNPNEPWII------CSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEEECSSSTTEE------EEEETTSEEEEEEECH
T ss_pred ceEEEECCCCCCEE------EEEECCCCEEEeEccc
Confidence 99999999988442 2344666677776543
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=2.7e-29 Score=234.42 Aligned_cols=232 Identities=9% Similarity=0.055 Sum_probs=186.3
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEE-EeecCCeEEEEECcCCCc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLS-CGTIGGNILHYDVRTHSD 316 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~i~d~~~~~~ 316 (488)
|...+.+++|+|+++.++++ +.++.|++||+++++.+..+..|...+.+++| +++.++ +++.++.|++||+++++
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~-~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~- 245 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQ-MQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL- 245 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEE-GGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-
T ss_pred cCCceeEEEEcCCCEEEEEE-CCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-
Confidence 77789999999999888888 89999999999999999999889999999999 567664 55589999999998753
Q ss_pred cceeeecCCccEEEEEEccCCcEEEEEe---------cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCC
Q psy14511 317 YPTAITREGDVVCGLKWSPNGRYLASGS---------NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQ 383 (488)
Q Consensus 317 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~---------d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~ 383 (488)
....+.. ...+.+++|+|+++++++++ |+.|++||+.+++....+... ..+|+|+++.++++ +..
T Consensus 246 ~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-~~~ 323 (433)
T 3bws_A 246 EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVS-DMC 323 (433)
T ss_dssp EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEE-ETT
T ss_pred EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEE-ecC
Confidence 4444444 34589999999999998887 469999999987544333111 22899999877664 678
Q ss_pred CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeC---------------CCcEEEEecCCCCccccccccCC
Q psy14511 384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASA---------------DETISIWNCFPRDKKRKARQVGS 448 (488)
Q Consensus 384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~---------------dg~v~iw~~~~~~~~~~~~~~~~ 448 (488)
++.|++||+.+++.+..+. +...+.+++|+|++++|++++. ||.|++||+.+++..........
T Consensus 324 ~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~ 402 (433)
T 3bws_A 324 CSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQ 402 (433)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSS
T ss_pred CCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCC
Confidence 9999999999998888776 6778999999999999988876 57999999999988766666778
Q ss_pred cceEEeecCCCceEEEEeeecccccceeeEEEEe
Q psy14511 449 GSSLEFAILKQPVSLTALLRSRAVEKQQHAIAYT 482 (488)
Q Consensus 449 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~ 482 (488)
+.+++|+|+++.+.... ..+..+.++..
T Consensus 403 ~~~~~~s~dg~~l~~~~------~~d~~i~v~~~ 430 (433)
T 3bws_A 403 PTGLDVSPDNRYLVISD------FLDHQIRVYRR 430 (433)
T ss_dssp EEEEEECTTSCEEEEEE------TTTTEEEEEEE
T ss_pred CceEEEcCCCCEEEEEE------CCCCeEEEEEe
Confidence 99999999998874322 23455555543
No 126
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-29 Score=236.51 Aligned_cols=237 Identities=10% Similarity=0.030 Sum_probs=177.1
Q ss_pred ccCceEEEEEEccCCcEE-EEec-CCeEEEEecc--ccCcCCCccccc--ccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511 34 REGDVVCGLKWSPNGRYL-ASGS-NNTVKIWDFR--QLDAKRPQVNNQ--CHLSAVKAIAWCPWEPTLLATGGGICDQTV 107 (488)
Q Consensus 34 ~h~~~V~~l~~sp~g~~l-as~~-d~~i~vwd~~--~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i 107 (488)
+|.+.|.+++|+|++++| ++++ |+.|+|||+. +++. +..+. .|...|.+++|+|++++|++++. ++.+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~g~v 173 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV---LKLRKRFCFSKRPNAISIAEDDTTVIIADK---FGDV 173 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC---EEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce---eeeeecccCCCCceEEEEcCCCCEEEEEeC---CCcE
Confidence 345579999999999996 8887 9999999998 5433 33333 56789999999999998887776 9999
Q ss_pred EEEecCCCeeee----eeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeeccccccccccc
Q psy14511 108 RLWNSMNGKEKC----HVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVK 183 (488)
Q Consensus 108 ~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (488)
++|++.++.... .+..+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~~-------------------------------------------------------- 197 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVSM-------------------------------------------------------- 197 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSSC--------------------------------------------------------
T ss_pred EEEecCCcccccccceeeecccCc--------------------------------------------------------
Confidence 999998776432 22222211
Q ss_pred CCCceeecCCCccccceeeeeeeCC-----CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEE
Q psy14511 184 AKPERILEAPSIINDFYTSGLDWGY-----HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV 258 (488)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 258 (488)
+.++.|++ ..+++++.|+.|++||+.+++....+. .+ |...|.+++|+ ++++|++
T Consensus 198 -----------------v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~-h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 198 -----------------LTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL-FG-HKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp -----------------EEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC-CC-CSSCEEEEEEC-STTEEEE
T ss_pred -----------------eEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee-cC-CCCceEEEEEC-CCCEEEE
Confidence 22233333 257788899999999999888665532 23 88999999999 9999999
Q ss_pred EeCCCCcEEEEECCcceeeeeecc-------------------------ccccEEEEEe--cCCEEEEee-cCCeEEEEE
Q psy14511 259 TNTCTEYIDLWHEQEERLIQKLRT-------------------------HMHQVIAMCW--NGNLLSCGT-IGGNILHYD 310 (488)
Q Consensus 259 ~~~~~~~i~i~d~~~~~~~~~~~~-------------------------~~~~v~~~~~--~~~~l~~~~-~dg~i~i~d 310 (488)
+ +.|+.|++||+.+++.+..+.. ....+.++.+ +++++++++ .++.|++|+
T Consensus 258 ~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 258 A-GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp E-ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred E-eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 9 8999999999999988877753 2346888888 688999988 899999999
Q ss_pred C--cCCC--ccceeeecCCccEEEEEEccCCcEEEEEec-------CeEEEEECC
Q psy14511 311 V--RTHS--DYPTAITREGDVVCGLKWSPNGRYLASGSN-------NTVKIWDFR 354 (488)
Q Consensus 311 ~--~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-------~~i~iwd~~ 354 (488)
+ .... .....+..+ ..|.+++|+|++.++++++. ..|.+|.+.
T Consensus 337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp ECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred eccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 9 4321 345556666 78999999996544444331 236777654
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.8e-29 Score=231.35 Aligned_cols=294 Identities=13% Similarity=0.101 Sum_probs=218.8
Q ss_pred CceEEEee----cCC----eEEEEEc--ccCccc-ceeecccCceEEEEEEcc--------------CCcEEEEec-C--
Q psy14511 5 GNLLSCGT----IGG----NILHYDV--RTHSDY-PTAITREGDVVCGLKWSP--------------NGRYLASGS-N-- 56 (488)
Q Consensus 5 g~~la~g~----~dg----~i~iwd~--~~~~~~-~~~~~~h~~~V~~l~~sp--------------~g~~las~~-d-- 56 (488)
-+++++|+ .+| .|+|||+ .+++.+ ...+.+|...+..+++++ .+..|+.++ +
T Consensus 75 ~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~ 154 (415)
T 2hqs_A 75 IDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNG 154 (415)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSS
T ss_pred CCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCC
Confidence 35677776 467 9999999 887754 245788988888888876 155666554 3
Q ss_pred ----CeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccc
Q psy14511 57 ----NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDET 132 (488)
Q Consensus 57 ----~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 132 (488)
+.|++||++.. ....+.+|...+.+++|+|||+++++++....+..|++||+.+++..
T Consensus 155 ~~~~~~i~i~d~~g~----~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-------------- 216 (415)
T 2hqs_A 155 GQFPYELRVSDYDGY----NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-------------- 216 (415)
T ss_dssp SSCCEEEEEEETTSC----SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--------------
T ss_pred CCccceEEEEcCCCC----CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE--------------
Confidence 79999999742 23446678999999999999998888876211248888888766531
Q ss_pred ccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEE
Q psy14511 133 ISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTL 212 (488)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (488)
T Consensus 217 -------------------------------------------------------------------------------- 216 (415)
T 2hqs_A 217 -------------------------------------------------------------------------------- 216 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCc--EEEEECCcceeeeeeccccccEEEE
Q psy14511 213 AVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY--IDLWHEQEERLIQKLRTHMHQVIAM 290 (488)
Q Consensus 213 ~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~--i~i~d~~~~~~~~~~~~~~~~v~~~ 290 (488)
.... +...+.+++|+|+|+.|+.+++.++. |++||+.+++. ..+..|...+.++
T Consensus 217 -------------------~l~~----~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~ 272 (415)
T 2hqs_A 217 -------------------QVAS----FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEP 272 (415)
T ss_dssp -------------------EEEC----CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEE
T ss_pred -------------------Eeec----CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccce
Confidence 1111 45578899999999988855366654 99999988765 5677788889999
Q ss_pred Ee--cCCEEEEeec-CC--eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccccee
Q psy14511 291 CW--NGNLLSCGTI-GG--NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLI 365 (488)
Q Consensus 291 ~~--~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~ 365 (488)
+| +++.|++++. ++ .|++||+.++. ...+..+...+.+++|+|+|++|++++..
T Consensus 273 ~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~~l~~~~~~------------------- 331 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSN------------------- 331 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEEC-------------------
T ss_pred EECCCCCEEEEEECCCCCcEEEEEECCCCC--EEEEecCCCcccCeEECCCCCEEEEEECc-------------------
Confidence 99 7888888776 44 68888987753 34455667788999999999999887620
Q ss_pred eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCcccc
Q psy14511 366 VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE---TISIWNCFPRDKKRK 442 (488)
Q Consensus 366 ~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---~v~iw~~~~~~~~~~ 442 (488)
..+..|++||+.+++. ..+..|. .+.+++|+|||++|++++.|+ .|++||+..+....+
T Consensus 332 ----------------~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 332 ----------------GGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp ----------------SSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred ----------------CCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 0123455566555554 3444454 789999999999999998877 799999998777778
Q ss_pred ccccCCcceEEeecCCC
Q psy14511 443 ARQVGSGSSLEFAILKQ 459 (488)
Q Consensus 443 ~~~~~~v~~~~~s~~~~ 459 (488)
..+.+.+.+++|+|...
T Consensus 394 ~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 394 PATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CCSSSEEEEEEECCCCC
T ss_pred eCCCCCCcCCccccccc
Confidence 88899999999999544
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=3.5e-29 Score=237.47 Aligned_cols=318 Identities=9% Similarity=0.040 Sum_probs=238.8
Q ss_pred EEccCCcEEEEec-CCeEEEEeccccCcCCCccccc-ccccceeEEEEecCCCeEEeeeCCcccceEEEEec--CCCeee
Q psy14511 43 KWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQ-CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS--MNGKEK 118 (488)
Q Consensus 43 ~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~--~~~~~~ 118 (488)
+|+|+++++++++ |++|.+||..+++.. ..+. ++. +..++|+||++++++++. |++|.+||+ .+++.+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~---~~i~~g~~--~~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIV---KVIDTGYA--VHISRMSASGRYLLVIGR---DARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEE---EEEECSTT--EEEEEECTTSCEEEEEET---TSEEEEEETTSSSCEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEE---EEEecCcc--cceEEECCCCCEEEEECC---CCeEEEEECcCCCCcEE
Confidence 4899999998887 999999999885543 3334 333 889999999999888887 899999999 555432
Q ss_pred eeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcccc
Q psy14511 119 CHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND 198 (488)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (488)
..+
T Consensus 216 ~~i----------------------------------------------------------------------------- 218 (543)
T 1nir_A 216 AEI----------------------------------------------------------------------------- 218 (543)
T ss_dssp EEE-----------------------------------------------------------------------------
T ss_pred EEE-----------------------------------------------------------------------------
Confidence 221
Q ss_pred ceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcC----CCCeEEEEeCCCCcEEEEECCcc
Q psy14511 199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP----RTTDLAVTNTCTEYIDLWHEQEE 274 (488)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~~~~~i~i~d~~~~ 274 (488)
. ....+..++|+| +|+++++++..+++|.+||..++
T Consensus 219 ------------------------------------~----~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 219 ------------------------------------K----IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp ------------------------------------E----CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred ------------------------------------e----cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 1 233578899999 99999999556899999999999
Q ss_pred eeeeeeccc----------c-ccEEEEEe--c-CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEE
Q psy14511 275 RLIQKLRTH----------M-HQVIAMCW--N-GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL 340 (488)
Q Consensus 275 ~~~~~~~~~----------~-~~v~~~~~--~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 340 (488)
+++..+..+ . ..+.++.+ + +.++++...++.|.+||+.+.+........+...+..++|+|+|+++
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEE
Confidence 888877642 2 26778877 3 45677788899999999987653332233455667889999999987
Q ss_pred EEEe--cCeEEEEECCCCCCCcccce----e----eeeecCCCCEEEEEccCCCCeEEEEeCCC-------cceeEEEee
Q psy14511 341 ASGS--NNTVKIWDFRQLDAKRPLGL----I----VPKLKREGRELVTSHGKQDCSLKMWEYPR-------LHLIEELKI 403 (488)
Q Consensus 341 ~~~~--d~~i~iwd~~~~~~~~~~~~----~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~-------~~~~~~~~~ 403 (488)
++++ +++|.+||..+++....+.. . ...++|++..++++....+++|.+||+.+ +++++++.+
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred EEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 7665 49999999998865544432 1 11346775555443234689999999988 899999999
Q ss_pred ccccEEEEEEcCCCCEEEEEe-------CCCcEEEEecCCCCcc-cc---------ccccCCcceEEeecCCCceEEEEe
Q psy14511 404 HQERILSAVLSPDQTCVAAAS-------ADETISIWNCFPRDKK-RK---------ARQVGSGSSLEFAILKQPVSLTAL 466 (488)
Q Consensus 404 ~~~~v~~~~~s~~~~~l~t~~-------~dg~v~iw~~~~~~~~-~~---------~~~~~~v~~~~~s~~~~~~~~~~~ 466 (488)
|...+..++++||+++|++++ .+++|.+||+.+++.. .. ..+...+..++|+|+|+.+.+...
T Consensus 419 ~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 419 QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVW 498 (543)
T ss_dssp SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEE
T ss_pred CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEee
Confidence 988899999999999999987 2789999999998866 22 234667899999999999865432
Q ss_pred eecccccceeeEEEEeecccc
Q psy14511 467 LRSRAVEKQQHAIAYTVFGEA 487 (488)
Q Consensus 467 ~~~~~~~~~~~~i~~~~~g~~ 487 (488)
....++..+.|+..++|+.
T Consensus 499 --~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 499 --NGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp --CCTTSCCEEEEEETTTTEE
T ss_pred --cCCCCCCeEEEEECCCceE
Confidence 1123455666777776653
No 129
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-30 Score=258.53 Aligned_cols=252 Identities=15% Similarity=0.242 Sum_probs=198.7
Q ss_pred cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC--CeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511 75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN--GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE 152 (488)
Q Consensus 75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (488)
.+.+|.++|++++|+|+++++++++. ||.|++||+.+ ++....+..+...+
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~---dg~I~vwd~~~~~~~~~~~l~~h~~~V------------------------ 56 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPV------------------------ 56 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEET---TTEEEEEEEETTEEEEEEEECCCSSCE------------------------
T ss_pred ecccCcceeEEEEECCCCCeEEEEEC---CCcEEEEecCCCCCccceeccCCcCce------------------------
Confidence 46789999999999999998887776 99999999974 34444444443322
Q ss_pred ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC----CCcEEEEECCCeEEEEECCCC
Q psy14511 153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG----YHDTLAVALDTSVYTWNTKTN 228 (488)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~v~iw~~~~~ 228 (488)
.++.|+ ++.+++++.||.|++||+.++
T Consensus 57 -------------------------------------------------~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~ 87 (753)
T 3jro_A 57 -------------------------------------------------WRVDWAHPKFGTILASCSYDGKVLIWKEENG 87 (753)
T ss_dssp -------------------------------------------------EEEEECCTTSCSEEEEEETTSCEEEEEEETT
T ss_pred -------------------------------------------------EEEEecCCCCCCEEEEEeCCCeEEEEECCCC
Confidence 223332 346788889999999999998
Q ss_pred ceEEEEecCCCCCCceEEEEEcCC--CCeEEEEeCCCCcEEEEECCcc--eeeeeeccccccEEEEEec-----------
Q psy14511 229 KTQLLVEYPTYDNAYISCVAWKPR--TTDLAVTNTCTEYIDLWHEQEE--RLIQKLRTHMHQVIAMCWN----------- 293 (488)
Q Consensus 229 ~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~----------- 293 (488)
+........+ |...|++++|+|+ ++.++++ +.||.|++||++.+ .....+.+|...|.++.|.
T Consensus 88 ~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sg-s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 88 RWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp EEEEEEEECC-CSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred cccccccccC-CCCCeEEEEECCCCCCCEEEEE-eCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 7555555555 8999999999999 8999999 99999999999876 3445567899999999993
Q ss_pred ----CCEEEEeecCCeEEEEECcCCC---ccceeeecCCccEEEEEEccC---CcEEEEEe-cCeEEEEECCCCCCCccc
Q psy14511 294 ----GNLLSCGTIGGNILHYDVRTHS---DYPTAITREGDVVCGLKWSPN---GRYLASGS-NNTVKIWDFRQLDAKRPL 362 (488)
Q Consensus 294 ----~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~-d~~i~iwd~~~~~~~~~~ 362 (488)
++.+++|+.||.|++||++++. .....+..|..+|.+++|+|+ +++|++++ ||.|++||+.+.+...
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~-- 243 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-- 243 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC--
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc--
Confidence 6799999999999999998764 344567789999999999999 89999998 6999999987652100
Q ss_pred ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511 363 GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
...+.....|...|++++|+|++++|++++.||.|++|++.++.
T Consensus 244 --------------------------------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 244 --------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp --------------------------------BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred --------------------------------eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 01122234578889999999999999999999999999998543
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=1.8e-28 Score=252.54 Aligned_cols=218 Identities=11% Similarity=0.059 Sum_probs=164.9
Q ss_pred cEEEEECCCeEEEEECCCCceEEEEecCC--------CCCCceEEEEEc-CCCCeEEEEeCCCCcEEEEECCcceeeeee
Q psy14511 210 DTLAVALDTSVYTWNTKTNKTQLLVEYPT--------YDNAYISCVAWK-PRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280 (488)
Q Consensus 210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~--------~~~~~i~~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~ 280 (488)
+.++.+.++.|++|++...... .+.... .+...+.+++|+ |+|+.++++ + ++.+.+|+...++.. .+
T Consensus 257 ~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~-~-~~~i~~~~~~~~~~~-~~ 332 (1045)
T 1k32_A 257 RRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFV-S-RGQAFIQDVSGTYVL-KV 332 (1045)
T ss_dssp SCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEE-E-TTEEEEECTTSSBEE-EC
T ss_pred CEEEEEeCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEE-E-cCEEEEEcCCCCceE-Ec
Confidence 3344456999999999554433 222100 022368899999 999999998 4 889999999876544 35
Q ss_pred ccccc-cEEEEEe-cCCEEEEeecCCeEE-EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCC
Q psy14511 281 RTHMH-QVIAMCW-NGNLLSCGTIGGNIL-HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQL 356 (488)
Q Consensus 281 ~~~~~-~v~~~~~-~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~ 356 (488)
..|.. .+..++| +++.++.++.++.+. +||+..+. ...+..|...+..++|+|||++|+++++ +.+++||+.++
T Consensus 333 ~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 333 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred cCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 56666 7888888 677888888888888 99988653 2334477788999999999999999984 99999999987
Q ss_pred CCCcccce-----eeeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE
Q psy14511 357 DAKRPLGL-----IVPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA 423 (488)
Q Consensus 357 ~~~~~~~~-----~~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~ 423 (488)
+....... ...+|+|||++++++... .++.|++||+.+++ +..+..|...+..++|+|||++|+++
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEE
Confidence 65433311 123899999999885321 23589999999887 67788888889999999999999999
Q ss_pred eCCCcEEEEec
Q psy14511 424 SADETISIWNC 434 (488)
Q Consensus 424 ~~dg~v~iw~~ 434 (488)
+.++...+|+.
T Consensus 490 s~~~~~~~~~~ 500 (1045)
T 1k32_A 490 SYRSLDPSPDR 500 (1045)
T ss_dssp ESCCCCCEECS
T ss_pred ecccCCcCcch
Confidence 98877777764
No 131
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.7e-28 Score=210.60 Aligned_cols=277 Identities=12% Similarity=0.070 Sum_probs=204.3
Q ss_pred eEEEEEEccCCc---EEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511 38 VVCGLKWSPNGR---YLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN 114 (488)
Q Consensus 38 ~V~~l~~sp~g~---~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~ 114 (488)
.+.++-|-..|- -+++++...|++|+..++...+.+.++..|+.+|..+.|.||...|+...-+ . +
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~-----~-- 109 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALG----N-----L-- 109 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEEC----S-----S--
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeec----c-----c--
Confidence 466676755443 5777789999999999875567888899999999999999998777665531 0 0
Q ss_pred CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511 115 GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS 194 (488)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (488)
T Consensus 110 -------------------------------------------------------------------------------- 109 (356)
T 2w18_A 110 -------------------------------------------------------------------------------- 109 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC----CCeEEEEeCCCCcEEEEE
Q psy14511 195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR----TTDLAVTNTCTEYIDLWH 270 (488)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~~~~~i~i~d 270 (488)
+...|..++++|+ ++.++.+ + ..+.+|+
T Consensus 110 ---------------------------------------------~~~~v~sla~spd~~~~~~~l~s~-g--~~~~v~~ 141 (356)
T 2w18_A 110 ---------------------------------------------EIREIRALFCSSDDESEKQVLLKS-G--NIKAVLG 141 (356)
T ss_dssp ---------------------------------------------SEEEEEEECC------CCEEEEEE-E--EEEEEEE
T ss_pred ---------------------------------------------cccceEEEEECCCccccccEEEeC-C--CeEEEEe
Confidence 3446889999999 8888887 4 3377776
Q ss_pred CCcceeeeeeccccccEEEEEecCCEEEEee--cCCeEEEEECcCCCccceeeecCCccEEEEEEcc---CCcEEEEEe-
Q psy14511 271 EQEERLIQKLRTHMHQVIAMCWNGNLLSCGT--IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP---NGRYLASGS- 344 (488)
Q Consensus 271 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~- 344 (488)
+.++ +++.++. .|+.|++|++....+....+..|...+..++|+| ++.+|++++
T Consensus 142 l~~g--------------------~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~ 201 (356)
T 2w18_A 142 LTKR--------------------RLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTI 201 (356)
T ss_dssp ETTT--------------------EEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEET
T ss_pred cCCC--------------------cEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecC
Confidence 5433 3333322 5889999999665566777888998899999999 779999999
Q ss_pred cCeEEEEECCCCCCCccccee------e--eeecCCCCEEEE----------EccCCCCeEEEEeCCCcceeEEE-----
Q psy14511 345 NNTVKIWDFRQLDAKRPLGLI------V--PKLKREGRELVT----------SHGKQDCSLKMWEYPRLHLIEEL----- 401 (488)
Q Consensus 345 d~~i~iwd~~~~~~~~~~~~~------~--~~~~~~~~~l~~----------~~g~~~~~i~i~d~~~~~~~~~~----- 401 (488)
|++|+|||+++++..+.+... + .+|+|+|+++++ ++|+.|++|++||..+++.+..+
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p 281 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLP 281 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeecc
Confidence 699999999998765555321 1 179999998864 44889999999999999887765
Q ss_pred eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc-ccccCCcc-eEEeecCCCceEEEEeeecccccceeeEE
Q psy14511 402 KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK-ARQVGSGS-SLEFAILKQPVSLTALLRSRAVEKQQHAI 479 (488)
Q Consensus 402 ~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~-~~~~~~v~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~i 479 (488)
.+|...+.+..+ ++.++|+++.|++|+|||+.+++.... .+|...+. +++|+||++.+ +.++.|..+.|
T Consensus 282 ~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L-------aSGS~D~TIkl 352 (356)
T 2w18_A 282 PGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL-------LAGQKDGNIFV 352 (356)
T ss_dssp TTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE-------EEECTTSCEEE
T ss_pred CCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE-------EEEECCCcEEE
Confidence 366666555544 488999999999999999999998754 45666554 58999999887 45678888888
Q ss_pred EEe
Q psy14511 480 AYT 482 (488)
Q Consensus 480 ~~~ 482 (488)
|..
T Consensus 353 Wd~ 355 (356)
T 2w18_A 353 YHY 355 (356)
T ss_dssp EEE
T ss_pred ecC
Confidence 753
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=2.8e-28 Score=242.71 Aligned_cols=346 Identities=11% Similarity=0.073 Sum_probs=231.0
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccCc---eEEEEEEccCCcEEEEec-C---------CeEEEEeccccCcC
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD---VVCGLKWSPNGRYLASGS-N---------NTVKIWDFRQLDAK 70 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~---~V~~l~~sp~g~~las~~-d---------~~i~vwd~~~~~~~ 70 (488)
||+++++ +.||+|++||+.+++.. ..+.+|.. .|.+++|||||++||+++ + +.|.+||+.+++.
T Consensus 27 dg~~~~~-~~dg~i~~~d~~~g~~~-~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~- 103 (723)
T 1xfd_A 27 DTEFIYR-EQKGTVRLWNVETNTST-VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP- 103 (723)
T ss_dssp SSCBCCC-CSSSCEEEBCGGGCCCE-EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-
T ss_pred CCcEEEE-eCCCCEEEEECCCCcEE-EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-
Confidence 8998876 67999999999998743 55666654 499999999999999986 3 7899999988654
Q ss_pred CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511 71 RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG 150 (488)
Q Consensus 71 ~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (488)
+.+....+|...+..++|+|||+.|+++. ++.|++||+.+++.......+...
T Consensus 104 ~~l~~~~~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~~~~g~~~~~~~~~~~~----------------------- 156 (723)
T 1xfd_A 104 QSLDPPEVSNAKLQYAGWGPKGQQLIFIF----ENNIYYCAHVGKQAIRVVSTGKEG----------------------- 156 (723)
T ss_dssp EECCCTTCCSCCCSBCCBCSSTTCEEEEE----TTEEEEESSSSSCCEEEECCCBTT-----------------------
T ss_pred EeccCCccccccccccEECCCCCEEEEEE----CCeEEEEECCCCceEEEecCCCCC-----------------------
Confidence 33333445666799999999999877765 679999999887654332211000
Q ss_pred eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511 151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT 230 (488)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~ 230 (488)
.++.+..+ |
T Consensus 157 -----------------------------------------------------------~~~~g~~~-----~------- 165 (723)
T 1xfd_A 157 -----------------------------------------------------------VIYNGLSD-----W------- 165 (723)
T ss_dssp -----------------------------------------------------------TEEEEECC-----H-------
T ss_pred -----------------------------------------------------------ceECcccc-----e-------
Confidence 00000000 0
Q ss_pred EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEE
Q psy14511 231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILH 308 (488)
Q Consensus 231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i 308 (488)
..+.+ ....+.+++|+|||+.|+++...++.+.+|++..... .+...+..+.+ +|.. ..+..|++
T Consensus 166 --v~~ee--~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~----~~~~~l~~ 232 (723)
T 1xfd_A 166 --LYEEE--ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG-----SIYPTVKPYHYPKAGSE----NPSISLHV 232 (723)
T ss_dssp --HHHHT--TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS-----SSSCCCEEEECCBTTSC----CCEEEEEE
T ss_pred --eEEEE--eccCcceEEECCCCCEEEEEEECCCccceEEeeccCC-----cCCCcceeccCCCCCCC----CCeeEEEE
Confidence 00000 1234588999999999999844556777887643211 12233555665 3431 23458999
Q ss_pred EECcCCCccceeeecC------CccEEEEEEccCCcEEEEEec-----CeEEEEECCCCCCCcccce----------eee
Q psy14511 309 YDVRTHSDYPTAITRE------GDVVCGLKWSPNGRYLASGSN-----NTVKIWDFRQLDAKRPLGL----------IVP 367 (488)
Q Consensus 309 ~d~~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~d-----~~i~iwd~~~~~~~~~~~~----------~~~ 367 (488)
||+.++. ....+..+ ...+..++|+|||++|++..+ ..|++||+.+++....+.. ...
T Consensus 233 ~d~~~~~-~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 311 (723)
T 1xfd_A 233 IGLNGPT-HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEP 311 (723)
T ss_dssp EESSSSC-CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCC
T ss_pred EECCCCc-eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCc
Confidence 9998764 23344433 567899999999999877642 5799999988764433221 134
Q ss_pred eecCCCCEEEEEccCCCC------eEEEEe-CCCcc--eeEEEeeccccEEE-EEEcCCCCEEEEEeCC---CcEEEEec
Q psy14511 368 KLKREGRELVTSHGKQDC------SLKMWE-YPRLH--LIEELKIHQERILS-AVLSPDQTCVAAASAD---ETISIWNC 434 (488)
Q Consensus 368 ~~~~~~~~l~~~~g~~~~------~i~i~d-~~~~~--~~~~~~~~~~~v~~-~~~s~~~~~l~t~~~d---g~v~iw~~ 434 (488)
.|+|||+.++..++..++ .|++|| ..+++ ....+..+...+.. ++|+|||+.|+..+.+ +.+++|++
T Consensus 312 ~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 312 VFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp EECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred eEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 899999988875345566 577788 34444 14455544444554 6999999999876655 78999998
Q ss_pred CCCC---cccccc---ccCCcceEEeecCCCceEEE
Q psy14511 435 FPRD---KKRKAR---QVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 435 ~~~~---~~~~~~---~~~~v~~~~~s~~~~~~~~~ 464 (488)
.... ...+.. +...+..+.|+|+++.+.+.
T Consensus 392 ~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 392 NTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp CSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred eCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 7532 222222 46678899999999988663
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1.3e-27 Score=238.39 Aligned_cols=318 Identities=10% Similarity=0.075 Sum_probs=220.2
Q ss_pred ccCCceEEEeec-CC-----eEEEEEcccCcccceeecccC------------------------ceEEEEEEccCCcEE
Q psy14511 2 CWNGNLLSCGTI-GG-----NILHYDVRTHSDYPTAITREG------------------------DVVCGLKWSPNGRYL 51 (488)
Q Consensus 2 ~~dg~~la~g~~-dg-----~i~iwd~~~~~~~~~~~~~h~------------------------~~V~~l~~sp~g~~l 51 (488)
+.||++||+++. |+ .|.+||+.+++.. ..+..|. ..|.+++|||||++|
T Consensus 45 SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l 123 (741)
T 2ecf_A 45 APDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR-LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRL 123 (741)
T ss_dssp CTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE-EEECGGGTC--------------------CCEESCCCEECTTSSEE
T ss_pred ecCCCEEEEEeccCCCCcccEEEEEECCCCcee-EccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEE
Confidence 459999999988 88 9999999988743 3343332 348899999999999
Q ss_pred EEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCc----
Q psy14511 52 ASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQ---- 127 (488)
Q Consensus 52 as~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~---- 127 (488)
++++++.|++||+.++... ....+..|...+..++|+|||++|+++. ++.|++||+.+++...........
T Consensus 124 ~~~~~~~i~~~d~~~~~~~-~~~~l~~~~~~~~~~~~SPDG~~la~~~----~~~i~~~d~~~g~~~~~~~~~~~~~~~g 198 (741)
T 2ecf_A 124 LFPLGGELYLYDLKQEGKA-AVRQLTHGEGFATDAKLSPKGGFVSFIR----GRNLWVIDLASGRQMQLTADGSTTIGNG 198 (741)
T ss_dssp EEEETTEEEEEESSSCSTT-SCCBCCCSSSCEEEEEECTTSSEEEEEE----TTEEEEEETTTTEEEECCCCCCSSEEES
T ss_pred EEEeCCcEEEEECCCCCcc-eEEEcccCCcccccccCCCCCCEEEEEe----CCcEEEEecCCCCEEEeccCCccceecc
Confidence 9999999999999875200 1223556778899999999999877665 669999999988765443322111
Q ss_pred ------------cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCc
Q psy14511 128 ------------ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSI 195 (488)
Q Consensus 128 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (488)
.....+++++
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg---------------------------------------------------------- 220 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDD---------------------------------------------------------- 220 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTS----------------------------------------------------------
T ss_pred ccceeeeeccccccceEECCCC----------------------------------------------------------
Confidence 0112222211
Q ss_pred cccceeeeeeeCCCcEEEEECC---------------------------------CeEEEEECCC-CceEEEEecCCCCC
Q psy14511 196 INDFYTSGLDWGYHDTLAVALD---------------------------------TSVYTWNTKT-NKTQLLVEYPTYDN 241 (488)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~d---------------------------------~~v~iw~~~~-~~~~~~~~~~~~~~ 241 (488)
..++.++.| ..|++||+.+ ++......... +.
T Consensus 221 -------------~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~ 286 (741)
T 2ecf_A 221 -------------SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKE-QD 286 (741)
T ss_dssp -------------SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSC-SS
T ss_pred -------------CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCC-cc
Confidence 112222211 1788899988 77654433223 67
Q ss_pred CceEEEEEcCCCCeEEEEeC----CCCcEEEEECCcceeeeeeccccc----cEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511 242 AYISCVAWKPRTTDLAVTNT----CTEYIDLWHEQEERLIQKLRTHMH----QVIAMCW--NGNLLSCGTIGGNILHYDV 311 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~----~~~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~--~~~~l~~~~~dg~i~i~d~ 311 (488)
..+..++| |||+.|++++. .+..|++||+.+++....+..+.. .+..+.| ||+++++++.+|.+++|.+
T Consensus 287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence 78999999 99999998732 356899999999887776655443 3346666 7888899999998888876
Q ss_pred cCCCccceeeecCCccEEEE-EEccCCcEEEEEe-c-C--eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCe
Q psy14511 312 RTHSDYPTAITREGDVVCGL-KWSPNGRYLASGS-N-N--TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS 386 (488)
Q Consensus 312 ~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~-d-~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 386 (488)
..... ...+..+...+..+ .|+|+++.|+..+ + + .+++|++...
T Consensus 366 ~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~------------------------------ 414 (741)
T 2ecf_A 366 DSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ------------------------------ 414 (741)
T ss_dssp CSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT------------------------------
T ss_pred cCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC------------------------------
Confidence 63333 66677777778877 5999998876554 3 3 6666665421
Q ss_pred EEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC----CcEEEEecCCCC
Q psy14511 387 LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD----ETISIWNCFPRD 438 (488)
Q Consensus 387 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d----g~v~iw~~~~~~ 438 (488)
++....+.. ...+..++||||+++|+....+ ..+.+|+...+.
T Consensus 415 --------g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~ 461 (741)
T 2ecf_A 415 --------GGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEK 461 (741)
T ss_dssp --------CCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE
T ss_pred --------CCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe
Confidence 222334443 4567899999999998876544 568999876543
No 134
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=9.8e-27 Score=230.76 Aligned_cols=347 Identities=10% Similarity=0.097 Sum_probs=208.1
Q ss_pred ccCCceEEEeecCCeEEEEEcccCccc-ceeecccC-----------------ceEEEEEEccCCcEEEEecCCeEEEEe
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDY-PTAITREG-----------------DVVCGLKWSPNGRYLASGSNNTVKIWD 63 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~-~~~~~~h~-----------------~~V~~l~~sp~g~~las~~d~~i~vwd 63 (488)
.|.|+.+++++.++ | +||+.+++.+ ...+ .|. ..|.+++|||| ++++.+.++.|++||
T Consensus 32 ~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~-~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~~~i~~~d 107 (706)
T 2z3z_A 32 QWMGDNYVFIEGDD-L-VFNKANGKSAQTTRF-SAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQGGLVGFD 107 (706)
T ss_dssp EEETTEEEEEETTE-E-EEEC-------CEEE-EHHHHHTTC-----------CCCEEEEETTT-TEEEEEETTEEEEEE
T ss_pred cCcCCeEEEEeCCc-E-EEECCCCcEeeEEee-chhHhhhhccchhccccccccCceeEEECCC-CeEEEEECCEEEEEE
Confidence 35466777777777 8 9999998752 2333 322 46999999999 777777789999999
Q ss_pred ccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCC-----CeeeeeeecCCCc-----------
Q psy14511 64 FRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN-----GKEKCHVKTDSQQ----------- 127 (488)
Q Consensus 64 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~----------- 127 (488)
+.+++.. .+..+...+.+++|+|||++++++ . ++.|++|++.+ ++...........
T Consensus 108 ~~~~~~~----~l~~~~~~~~~~~~SpdG~~la~~-~---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 108 MLARKVT----YLFDTNEETASLDFSPVGDRVAYV-R---NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp TTTTEEE----EEECCTTCCTTCEECTTSSEEEEE-E---TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGC
T ss_pred CCCCceE----EccCCcccccCCcCCCCCCEEEEE-E---CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhh
Confidence 9875422 234466778999999999987774 4 89999999988 7655433322211
Q ss_pred ---cccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeee
Q psy14511 128 ---ANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGL 204 (488)
Q Consensus 128 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (488)
.....+++++. .++................... ..+. ....
T Consensus 180 ~~~~~~~~~SpDg~---~la~~~~d~~~~~~~~~~~~~~--------------------~~~~-------------~~~~ 223 (706)
T 2z3z_A 180 FGIEKGTFWSPKGS---CLAFYRMDQSMVKPTPIVDYHP--------------------LEAE-------------SKPL 223 (706)
T ss_dssp TTCCCSEEECTTSS---EEEEEEEECTTSCCEEEEECCS--------------------SSCE-------------EEEE
T ss_pred cCCCceEEECCCCC---EEEEEEECCCCCceEEeeccCC--------------------CCCc-------------eEEe
Confidence 12222222210 0000000000000000000000 0000 0000
Q ss_pred eeC-CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC-----cEEEEECCcceeee
Q psy14511 205 DWG-YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE-----YIDLWHEQEERLIQ 278 (488)
Q Consensus 205 ~~~-~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-----~i~i~d~~~~~~~~ 278 (488)
.+. .+ ....+..|++||+.+++......... +...+.+++|+|||+.|+++ +.++ .|++||+.+++...
T Consensus 224 ~y~~~g---~~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~-~~~~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 224 YYPMAG---TPSHHVTVGIYHLATGKTVYLQTGEP-KEKFLTNLSWSPDENILYVA-EVNRAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp CCCBTT---SCCCEEEEEEEETTTTEEEECCCCSC-TTCEEEEEEECTTSSEEEEE-EECTTSCEEEEEEEETTTCCEEE
T ss_pred eCCCCC---CCCCeeEEEEEECCCCceEeeccCCC-CceeEeeEEEECCCCEEEEE-EeCCCCCeeEEEEEECCCCceee
Confidence 000 00 00134679999999987655443223 66789999999999999987 5554 89999999883333
Q ss_pred eec-c-ccc---cEEEEEe----cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEE-EEEccCCcEEEEEe-c-C
Q psy14511 279 KLR-T-HMH---QVIAMCW----NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCG-LKWSPNGRYLASGS-N-N 346 (488)
Q Consensus 279 ~~~-~-~~~---~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~-d-~ 346 (488)
.+. . +.. .+..+.| ++++++++..++.+++|++.........+..+...+.. ++|+|+++.|+.++ + +
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred EEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 332 2 211 1233444 77889999999999999887333455666777777776 79999998887665 2 2
Q ss_pred eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC
Q psy14511 347 TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD 426 (488)
Q Consensus 347 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d 426 (488)
.....|+.||+.+++ ...+. |...+.+++|||||++|+....+
T Consensus 379 -----------------------------------~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 379 -----------------------------------PLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp -----------------------------------TTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEEC
T ss_pred -----------------------------------CceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecC
Confidence 001134444444443 22333 55678999999999998876543
Q ss_pred ----CcEEEEecCCCC
Q psy14511 427 ----ETISIWNCFPRD 438 (488)
Q Consensus 427 ----g~v~iw~~~~~~ 438 (488)
+.|++||+.+++
T Consensus 422 ~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 422 PTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSCSCEEEEEESSSCE
T ss_pred CCCCcEEEEEECCCCe
Confidence 569999998876
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1.8e-26 Score=230.28 Aligned_cols=300 Identities=9% Similarity=0.073 Sum_probs=216.9
Q ss_pred CceEEEEEEccCCcEEEEec--CC-----eEEEEeccccCcCCCcccccccc----------------------cceeEE
Q psy14511 36 GDVVCGLKWSPNGRYLASGS--NN-----TVKIWDFRQLDAKRPQVNNQCHL----------------------SAVKAI 86 (488)
Q Consensus 36 ~~~V~~l~~sp~g~~las~~--d~-----~i~vwd~~~~~~~~~~~~~~~h~----------------------~~v~~l 86 (488)
...|.+++|||||++|++++ |+ .|++||+.+++... +.....+. ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-EECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 45699999999999999986 67 89999998765332 21122222 347899
Q ss_pred EEecCCCeEEeeeCCcccceEEEEecCCC---eeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511 87 AWCPWEPTLLATGGGICDQTVRLWNSMNG---KEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK 163 (488)
Q Consensus 87 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (488)
+|+|||++|++++ ++.|++||+.++ ... .
T Consensus 115 ~~SpDg~~l~~~~----~~~i~~~d~~~~~~~~~~-~------------------------------------------- 146 (741)
T 2ecf_A 115 QWSPDAQRLLFPL----GGELYLYDLKQEGKAAVR-Q------------------------------------------- 146 (741)
T ss_dssp EECTTSSEEEEEE----TTEEEEEESSSCSTTSCC-B-------------------------------------------
T ss_pred EECCCCCEEEEEe----CCcEEEEECCCCCcceEE-E-------------------------------------------
Confidence 9999998877665 578999998765 210 0
Q ss_pred ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCc
Q psy14511 164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAY 243 (488)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 243 (488)
+.. +...
T Consensus 147 ------------------------------------------------------------------------l~~-~~~~ 153 (741)
T 2ecf_A 147 ------------------------------------------------------------------------LTH-GEGF 153 (741)
T ss_dssp ------------------------------------------------------------------------CCC-SSSC
T ss_pred ------------------------------------------------------------------------ccc-CCcc
Confidence 001 4456
Q ss_pred eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc----------------EEEEEe--cCCEEEEeecCC-
Q psy14511 244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ----------------VIAMCW--NGNLLSCGTIGG- 304 (488)
Q Consensus 244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~----------------v~~~~~--~~~~l~~~~~dg- 304 (488)
+..++|+|||++|+++ + ++.|++||+.+++.......+... +..+.| ||+.|++++.|+
T Consensus 154 ~~~~~~SPDG~~la~~-~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~ 231 (741)
T 2ecf_A 154 ATDAKLSPKGGFVSFI-R-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDES 231 (741)
T ss_dssp EEEEEECTTSSEEEEE-E-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECT
T ss_pred cccccCCCCCCEEEEE-e-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCC
Confidence 8899999999999988 4 568999999987766555444332 355677 789999887765
Q ss_pred --------------------------------eEEEEECcC-CCccceeee--cCCccEEEEEEccCCcEEEEEe-----
Q psy14511 305 --------------------------------NILHYDVRT-HSDYPTAIT--REGDVVCGLKWSPNGRYLASGS----- 344 (488)
Q Consensus 305 --------------------------------~i~i~d~~~-~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~----- 344 (488)
.|++||+.+ ++ ...... .|...+..++| |||++|+++.
T Consensus 232 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~ 309 (741)
T 2ecf_A 232 PVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ 309 (741)
T ss_dssp TSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS
T ss_pred CCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC
Confidence 788999987 54 222222 47778999999 9999998764
Q ss_pred -cCeEEEEECCCCCCCccccee---------eeeecCCCCEEEEEccCCCCeEEEEeCC-CcceeEEEeeccccEEEE-E
Q psy14511 345 -NNTVKIWDFRQLDAKRPLGLI---------VPKLKREGRELVTSHGKQDCSLKMWEYP-RLHLIEELKIHQERILSA-V 412 (488)
Q Consensus 345 -d~~i~iwd~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~v~~~-~ 412 (488)
+..|++||+.+++....+... ...|+|||+.+++ +..++.++||.+. +++ ...+..|...|..+ .
T Consensus 310 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~--~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~ 386 (741)
T 2ecf_A 310 KKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS--SERTGFQHLYRIDSKGK-AAALTHGNWSVDELLA 386 (741)
T ss_dssp SEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE--ECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEE
T ss_pred CeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE--ecCCCccEEEEEcCCCC-eeeeeecceEEEeEeE
Confidence 267999999987654333221 2389999997766 5678877777664 345 77888888888887 5
Q ss_pred EcCCCCEEEE-EeCCC--cEEEEecCC-CCccccccccCCcceEEeecCCCceEEE
Q psy14511 413 LSPDQTCVAA-ASADE--TISIWNCFP-RDKKRKARQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 413 ~s~~~~~l~t-~~~dg--~v~iw~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~ 464 (488)
|+||++.|+. ++.++ .+++|++.. +...........+.++.|+||++.+...
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDS 442 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEE
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEE
Confidence 9999997765 44555 899999874 4433333336667899999999988664
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=8.1e-26 Score=204.01 Aligned_cols=306 Identities=11% Similarity=0.072 Sum_probs=198.6
Q ss_pred CccCCceEEEeecCCeEEEEEccc-CcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEecc--ccCcCCCccc
Q psy14511 1 MCWNGNLLSCGTIGGNILHYDVRT-HSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFR--QLDAKRPQVN 75 (488)
Q Consensus 1 ~~~dg~~la~g~~dg~i~iwd~~~-~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~--~~~~~~~~~~ 75 (488)
|+.+..++++++.++.|.+||+.. +.........|...+.+++|+|+|++|++++ ++.|.+|++. +++ ...+..
T Consensus 1 ~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-~~~~~~ 79 (343)
T 1ri6_A 1 MSLKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-LTFAAE 79 (343)
T ss_dssp -CCEEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-EEEEEE
T ss_pred CCceEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-eeeccc
Confidence 444555666668899999999963 3211222345777899999999999888887 4999999997 332 222223
Q ss_pred ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511 76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155 (488)
Q Consensus 76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (488)
+..+ ..+..++|+|+++++++++.. ++.|.+||+.++.....
T Consensus 80 ~~~~-~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~----------------------------------- 121 (343)
T 1ri6_A 80 SALP-GSLTHISTDHQGQFVFVGSYN--AGNVSVTRLEDGLPVGV----------------------------------- 121 (343)
T ss_dssp EECS-SCCSEEEECTTSSEEEEEETT--TTEEEEEEEETTEEEEE-----------------------------------
T ss_pred cccC-CCCcEEEEcCCCCEEEEEecC--CCeEEEEECCCCccccc-----------------------------------
Confidence 3333 378999999999988888764 88999999853321100
Q ss_pred cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE 235 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~ 235 (488)
.....
T Consensus 122 ---------------------------------------------------------------------------~~~~~ 126 (343)
T 1ri6_A 122 ---------------------------------------------------------------------------VDVVE 126 (343)
T ss_dssp ---------------------------------------------------------------------------EEEEC
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00111
Q ss_pred cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeee----eecc-ccccEEEEEe--cCCEEEEe-ecCCeE
Q psy14511 236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQ----KLRT-HMHQVIAMCW--NGNLLSCG-TIGGNI 306 (488)
Q Consensus 236 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~----~~~~-~~~~v~~~~~--~~~~l~~~-~~dg~i 306 (488)
....+.+++|+|+++++++++..++.|.+||+.+ ++... .+.. ....+..++| ++++++++ ..++.+
T Consensus 127 ----~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i 202 (343)
T 1ri6_A 127 ----GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSV 202 (343)
T ss_dssp ----CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred ----CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 2234778999999999988844899999999987 54322 2222 2346777888 67766554 478999
Q ss_pred EEEECcCCC-cc--ceeee---cC---CccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCE
Q psy14511 307 LHYDVRTHS-DY--PTAIT---RE---GDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRE 375 (488)
Q Consensus 307 ~i~d~~~~~-~~--~~~~~---~~---~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 375 (488)
.+|++.... .. ..... .. ...+..++|+|+|++|+++. ++.|.+||+...
T Consensus 203 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~------------------- 263 (343)
T 1ri6_A 203 DVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED------------------- 263 (343)
T ss_dssp EEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-------------------
T ss_pred EEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC-------------------
Confidence 999996421 11 11111 11 23466788999998777554 377777776531
Q ss_pred EEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecC--CCCcc--ccccccCCcc
Q psy14511 376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCF--PRDKK--RKARQVGSGS 450 (488)
Q Consensus 376 l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~--~~~~~--~~~~~~~~v~ 450 (488)
.+ +.+.+..+..+.. +..++|+|++++|++++ .++.|.+|+++ +++.. ..........
T Consensus 264 --------~~--------~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~ 326 (343)
T 1ri6_A 264 --------GS--------VLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPM 326 (343)
T ss_dssp --------SC--------CEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCC
T ss_pred --------CC--------ceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCe
Confidence 00 1223334443444 88999999999988888 68999999655 55433 2222335567
Q ss_pred eEEeecCCCc
Q psy14511 451 SLEFAILKQP 460 (488)
Q Consensus 451 ~~~~s~~~~~ 460 (488)
+++|.|+.+.
T Consensus 327 ~i~~~~~~~~ 336 (343)
T 1ri6_A 327 WVVVNAHEGG 336 (343)
T ss_dssp EEEEEEEC--
T ss_pred eEEEEcccCC
Confidence 7888775543
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=5.3e-25 Score=197.54 Aligned_cols=292 Identities=11% Similarity=0.053 Sum_probs=192.2
Q ss_pred CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccc
Q psy14511 5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSA 82 (488)
Q Consensus 5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~ 82 (488)
+..+++++.++.|.+||..+++.. ..+..+...+ +++|+|+|++|++++ ++.|.+||..+++.. ...+..+..+
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~ 85 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEIL-NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK--VVAIQEGQSS 85 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEE-EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE--EEEEEECSSC
T ss_pred CEEEEEecCCCeEEEEeCccccee-eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee--EEecccCCCC
Confidence 445778888999999999998854 3444555666 999999999776665 789999999875431 3334445555
Q ss_pred eeEEEEecCCCeEEeeeCCccc-c--eEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 83 VKAIAWCPWEPTLLATGGGICD-Q--TVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 83 v~~l~~~~~~~~l~~~~~~~~d-~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
..+++|+|+++++++... + + .|.+||+.+++.+..+
T Consensus 86 ~~~~~~s~dg~~l~~~~~---~~~~~~i~v~d~~~~~~~~~~-------------------------------------- 124 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTG---LNHPFNMQSYSFLKNKFISTI-------------------------------------- 124 (331)
T ss_dssp CCCEEECTTSSEEEECCC---SSSSCEEEEEETTTTEEEEEE--------------------------------------
T ss_pred ccceEECCCCCEEEEecC---CCCcccEEEEECCCCCeEEEE--------------------------------------
Confidence 555999999998884443 3 3 8999998776643221
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCC
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY 239 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~ 239 (488)
.
T Consensus 125 ---------------------------------------------------------------------------~---- 125 (331)
T 3u4y_A 125 ---------------------------------------------------------------------------P---- 125 (331)
T ss_dssp ---------------------------------------------------------------------------E----
T ss_pred ---------------------------------------------------------------------------E----
Confidence 1
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCc-EEEEECCcceee----eeeccccccEEEEEe--cCCEEE-EeecCCeEEEEEC
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEY-IDLWHEQEERLI----QKLRTHMHQVIAMCW--NGNLLS-CGTIGGNILHYDV 311 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~-i~i~d~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~i~d~ 311 (488)
......+++|+|+|+++++++..++. +.+|++.....+ ............+++ +++.++ ++..++.|++||+
T Consensus 126 ~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 126 IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 22345789999999877777466688 999998753322 111123445677888 677554 4556899999999
Q ss_pred cCCCcc--ceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeE
Q psy14511 312 RTHSDY--PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSL 387 (488)
Q Consensus 312 ~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i 387 (488)
.+++.. ...+..+ ..+..++|+|+|++++++. ++.|.+||+.+++..
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~---------------------------- 256 (331)
T 3u4y_A 206 QNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS---------------------------- 256 (331)
T ss_dssp SSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE----------------------------
T ss_pred CCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee----------------------------
Confidence 876420 3444433 4567899999999777665 366777776644210
Q ss_pred EEEeCCCcceeEEEee-------ccccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCccccccccCCcceEEeecCC
Q psy14511 388 KMWEYPRLHLIEELKI-------HQERILSAVLSPDQTCVAAASA-DETISIWNCFPRDKKRKARQVGSGSSLEFAILK 458 (488)
Q Consensus 388 ~i~d~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~t~~~-dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~ 458 (488)
.+..+.. .......++|+||+++|++++. ++.|.+||+.+.................++|+.
T Consensus 257 ---------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 257 ---------FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp ---------EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCCCBSCEEECCCC-
T ss_pred ---------eecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccceecccccCCeEEECCcc
Confidence 0111111 1112356899999998876654 579999999876654433333333334455543
No 138
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.3e-24 Score=200.18 Aligned_cols=250 Identities=13% Similarity=0.093 Sum_probs=183.3
Q ss_pred CceEEEeecC------CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C---CeEEEEeccccCcCCCcc
Q psy14511 5 GNLLSCGTIG------GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---NTVKIWDFRQLDAKRPQV 74 (488)
Q Consensus 5 g~~la~g~~d------g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d---~~i~vwd~~~~~~~~~~~ 74 (488)
+..++.++.+ +.|++||+.... ...+.+|...|.+++|||||++||+++ + ..|++||+.+++..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~--~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~---- 216 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN--QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---- 216 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS--CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE----
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC--CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE----
Confidence 5666666654 799999997543 366788999999999999999999987 5 49999999876532
Q ss_pred cccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511 75 NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID 154 (488)
Q Consensus 75 ~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (488)
.+..|...+.+++|+|||++|+.+++...+..|++||+.+++..
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~------------------------------------ 260 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR------------------------------------ 260 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE------------------------------------
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE------------------------------------
Confidence 34567789999999999998886665311334778887655421
Q ss_pred ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEE
Q psy14511 155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV 234 (488)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~ 234 (488)
T Consensus 261 -------------------------------------------------------------------------------- 260 (415)
T 2hqs_A 261 -------------------------------------------------------------------------------- 260 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC---CeEE
Q psy14511 235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG---GNIL 307 (488)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~ 307 (488)
.+.. +...+.+++|+|+|+.|++++..++ .|.+||+.+++. ..+..+...+.+++| +|++|++++.+ ..|+
T Consensus 261 ~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 261 QVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA 338 (415)
T ss_dssp ECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred eCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEE
Confidence 1111 5567889999999999998844455 677779887653 445556677888888 78999888764 5899
Q ss_pred EEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCe
Q psy14511 308 HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS 386 (488)
Q Consensus 308 i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 386 (488)
+||+.++.. ..+..+. .+.+++|+|+|++|++++ ++. ...
T Consensus 339 ~~d~~~~~~--~~l~~~~-~~~~~~~spdg~~l~~~s~~~~------------------------------------~~~ 379 (415)
T 2hqs_A 339 KQDLATGGV--QVLSSTF-LDETPSLAPNGTMVIYSSSQGM------------------------------------GSV 379 (415)
T ss_dssp EEETTTCCE--EECCCSS-SCEEEEECTTSSEEEEEEEETT------------------------------------EEE
T ss_pred EEECCCCCE--EEecCCC-CcCCeEEcCCCCEEEEEEcCCC------------------------------------ccE
Confidence 999987642 3455554 789999999999998886 320 113
Q ss_pred EEEEeCCCcceeEEEeeccccEEEEEEcCCCC
Q psy14511 387 LKMWEYPRLHLIEELKIHQERILSAVLSPDQT 418 (488)
Q Consensus 387 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~ 418 (488)
|++||+. ++....+..|.+.|.+++|+|.-.
T Consensus 380 l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 380 LNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred EEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 4444443 344667888999999999999643
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=6.9e-24 Score=192.14 Aligned_cols=277 Identities=10% Similarity=0.053 Sum_probs=206.3
Q ss_pred cCceEEEEEEccCCcEEEEec--------CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccce
Q psy14511 35 EGDVVCGLKWSPNGRYLASGS--------NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQT 106 (488)
Q Consensus 35 h~~~V~~l~~sp~g~~las~~--------d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~ 106 (488)
....+..++|+|+|++|++++ ++.|.+||..+++....+ . ....+..++|+|++++++++... ++.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~v~~~~--~~~ 112 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI---H-NDLKPFGATINNTTQTLWFGNTV--NSA 112 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE---E-ESSCCCSEEEETTTTEEEEEETT--TTE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE---e-cCCCcceEEECCCCCEEEEEecC--CCE
Confidence 345678999999999888876 568999999875533322 2 23457889999999988877764 899
Q ss_pred EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511 107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP 186 (488)
Q Consensus 107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
|.+||+.+++.+..+..+....
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~---------------------------------------------------------- 134 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKR---------------------------------------------------------- 134 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCC----------------------------------------------------------
T ss_pred EEEEeCCCCeeEEEEecCCCcc----------------------------------------------------------
Confidence 9999998887654443321000
Q ss_pred ceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEe-CCCCc
Q psy14511 187 ERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTN-TCTEY 265 (488)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~~ 265 (488)
. . .. ....+.+++|+|+++.+++++ ..++.
T Consensus 135 -----------------------------------------~------~-~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~ 165 (353)
T 3vgz_A 135 -----------------------------------------T------E-EV-RPLQPRELVADDATNTVYISGIGKESV 165 (353)
T ss_dssp -----------------------------------------C------S-SC-CCCEEEEEEEETTTTEEEEEEESSSCE
T ss_pred -----------------------------------------c------c-cc-CCCCCceEEECCCCCEEEEEecCCCce
Confidence 0 0 00 122367899999999888884 35788
Q ss_pred EEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeec----CCccEEEEEEccCCcE
Q psy14511 266 IDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITR----EGDVVCGLKWSPNGRY 339 (488)
Q Consensus 266 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~ 339 (488)
|.+||..+++.+..+..+...+..+.+ +++.+++++.++.|.+||+.+++ ....+.. +...+..++|+|++++
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQR 244 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred EEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCE
Confidence 999999999888888755555666666 78999999999999999998864 3333332 4556788999999998
Q ss_pred EEEEe-c-CeEEEEECCCCCCCccccee---eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc
Q psy14511 340 LASGS-N-NTVKIWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS 414 (488)
Q Consensus 340 l~~~~-d-~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s 414 (488)
+++++ + +.|.+||..+++....+... ...|+|++++++++ ...++.|.+||..+++.+..+... ..+.+++|+
T Consensus 245 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~-~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s 322 (353)
T 3vgz_A 245 AFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVT-HRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALS 322 (353)
T ss_dssp EEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEE-ETTTTEEEEEETTTTEEEEEEECC-SEEEEEEEC
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEE-ECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEc
Confidence 87776 4 99999999887654333221 23899999987765 557899999999999988887754 468999999
Q ss_pred CCCCEEEEEeCCC
Q psy14511 415 PDQTCVAAASADE 427 (488)
Q Consensus 415 ~~~~~l~t~~~dg 427 (488)
|||++|+.+..++
T Consensus 323 ~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 323 ADGKTLYVSVKQK 335 (353)
T ss_dssp TTSCEEEEEEECC
T ss_pred CCCCEEEEEEccc
Confidence 9999887776654
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1e-24 Score=192.43 Aligned_cols=268 Identities=14% Similarity=0.117 Sum_probs=190.6
Q ss_pred EeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccc-cCcCCCccccccc-ccceeEEE
Q psy14511 10 CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ-LDAKRPQVNNQCH-LSAVKAIA 87 (488)
Q Consensus 10 ~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~-~~~~~~~~~~~~h-~~~v~~l~ 87 (488)
.++.++.|.+||+.+++. ..+..|...|.+++|+|+|++|++++++.|++||+.+ ++... ....| ...+.+++
T Consensus 17 ~~~~~~~i~~~d~~~~~~--~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM--RVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEK---VDTGFATICNNDHG 91 (297)
T ss_dssp -CCCCEEEEEEETTTTEE--EEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEE---CCCTTCCCBCSCCE
T ss_pred CCCcceeEEEEeCCCCce--eeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceE---eccccccccccceE
Confidence 345789999999988773 3466788999999999999999999999999999987 54332 22334 47889999
Q ss_pred EecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccccc
Q psy14511 88 WCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVS 167 (488)
Q Consensus 88 ~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (488)
|+|++++++++... .++...+|.++...
T Consensus 92 ~spdg~~l~~~~~~-~~~~~~l~~~~~~~--------------------------------------------------- 119 (297)
T 2ojh_A 92 ISPDGALYAISDKV-EFGKSAIYLLPSTG--------------------------------------------------- 119 (297)
T ss_dssp ECTTSSEEEEEECT-TTSSCEEEEEETTC---------------------------------------------------
T ss_pred ECCCCCEEEEEEeC-CCCcceEEEEECCC---------------------------------------------------
Confidence 99999988887731 14455555543111
Q ss_pred ceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEE
Q psy14511 168 PTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCV 247 (488)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~ 247 (488)
+.. ..+. ....+..+
T Consensus 120 ------------------------------------------------------------~~~-~~~~----~~~~~~~~ 134 (297)
T 2ojh_A 120 ------------------------------------------------------------GTP-RLMT----KNLPSYWH 134 (297)
T ss_dssp ------------------------------------------------------------CCC-EECC----SSSSEEEE
T ss_pred ------------------------------------------------------------Cce-EEee----cCCCccce
Confidence 110 0011 22247889
Q ss_pred EEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeeccccccEEEEEe--cCCEEEEee-cCCeEEEEECcCCCccceeeec
Q psy14511 248 AWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTHMHQVIAMCW--NGNLLSCGT-IGGNILHYDVRTHSDYPTAITR 323 (488)
Q Consensus 248 ~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~ 323 (488)
+|+|+++.++.++..++.+++|+++. ......+..+...+.++.| +++.++.++ .++.+++|++.........+..
T Consensus 135 ~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred EECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 99999999885547889999998532 2344566677888999999 678777665 5899999998744455667777
Q ss_pred CCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcce--eEE
Q psy14511 324 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHL--IEE 400 (488)
Q Consensus 324 ~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~--~~~ 400 (488)
+...+..++|+|+|++|++++ ++... ... ...++.|++||+.+++. +..
T Consensus 215 ~~~~~~~~~~s~dg~~l~~~~~~~~~~----~~~------------------------~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 215 SAYGDWFPHPSPSGDKVVFVSYDADVF----DHP------------------------RDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CSEEEEEEEECTTSSEEEEEEEETTCC----SCC------------------------SSEEEEEEEEETTSCSCEEEEE
T ss_pred CCcccCCeEECCCCCEEEEEEcCCCCC----ccc------------------------ccCceEEEEEecCCCCceeeec
Confidence 888899999999999998876 32100 000 11234577777766654 344
Q ss_pred EeeccccEEEEEEcCCCCEEEEEeCCC
Q psy14511 401 LKIHQERILSAVLSPDQTCVAAASADE 427 (488)
Q Consensus 401 ~~~~~~~v~~~~~s~~~~~l~t~~~dg 427 (488)
+.+|...+..++|+||+++|++++.|.
T Consensus 267 ~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 267 LFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCCCCcccccceECCCCCEEEEEEecc
Confidence 557888899999999999999887664
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=2.8e-24 Score=213.11 Aligned_cols=218 Identities=13% Similarity=0.089 Sum_probs=160.3
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-----ceeeeeecccccc--------------EEEEEe--cCCEEEEe
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-----ERLIQKLRTHMHQ--------------VIAMCW--NGNLLSCG 300 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-----~~~~~~~~~~~~~--------------v~~~~~--~~~~l~~~ 300 (488)
..+.+++|+|+|+.|+++ .++.|++||+.+ ++.......+... +.++.| ||+.|+++
T Consensus 121 ~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~ 198 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY 198 (706)
T ss_dssp TCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred ccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence 346678899999999887 578999999988 7665544444333 367777 79999988
Q ss_pred e---------------------------------cCCeEEEEECcCCCcccee-eecCCccEEEEEEccCCcEEEEEe-c
Q psy14511 301 T---------------------------------IGGNILHYDVRTHSDYPTA-ITREGDVVCGLKWSPNGRYLASGS-N 345 (488)
Q Consensus 301 ~---------------------------------~dg~i~i~d~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~-d 345 (488)
+ .+..|++||+.++...... ...+...+..++|+|||++|++++ +
T Consensus 199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 7 3467999999875421111 124667799999999999998876 4
Q ss_pred C-----eEEEEECCCCCCCcccc-e---------eeeeecC--CCCEEEEEccCCCCeEEEEeCC-CcceeEEEeecccc
Q psy14511 346 N-----TVKIWDFRQLDAKRPLG-L---------IVPKLKR--EGRELVTSHGKQDCSLKMWEYP-RLHLIEELKIHQER 407 (488)
Q Consensus 346 ~-----~i~iwd~~~~~~~~~~~-~---------~~~~~~~--~~~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~ 407 (488)
+ .|++||+.+++....+. . ....|+| ||+++++ +..++.+++|++. +++.+..+..|...
T Consensus 279 ~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~--~~~~g~~~l~~~~~~~~~~~~l~~~~~~ 356 (706)
T 2z3z_A 279 RAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ--SRRDGWNHLYLYDTTGRLIRQVTKGEWE 356 (706)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE--ECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred CCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEE--EccCCccEEEEEECCCCEEEecCCCCeE
Confidence 3 89999998873222221 1 1138999 9998877 6778888888875 67777888888888
Q ss_pred EEE-EEEcCCCCEEEEEeCC-C----cEEEEecCCCCccccccccCCcceEEeecCCCceEEE
Q psy14511 408 ILS-AVLSPDQTCVAAASAD-E----TISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 408 v~~-~~~s~~~~~l~t~~~d-g----~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~ 464 (488)
+.. ++|+||++.|+.++.+ + .|+.||+.+++.. ...+...+.+++|+|+++.+...
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK-DLTPESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE-ESCCSSSEEEEEECTTSSEEEEE
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce-eccCCCceEEEEECCCCCEEEEE
Confidence 877 8999999988766544 4 6777777776643 33466778899999999987654
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=2.4e-24 Score=193.83 Aligned_cols=276 Identities=11% Similarity=0.069 Sum_probs=182.7
Q ss_pred ceEEEeecCCeEEEEEcccCcccceeecccCc-eEEEEEEccCCcEEEEe-c-CCeEEEEeccccCcCCCcccccc---c
Q psy14511 6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VVCGLKWSPNGRYLASG-S-NNTVKIWDFRQLDAKRPQVNNQC---H 79 (488)
Q Consensus 6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~-~V~~l~~sp~g~~las~-~-d~~i~vwd~~~~~~~~~~~~~~~---h 79 (488)
++|++++.++.|.+||+.+++.+.....++.. .+..++|+|+|++|+.+ . ++.|.+||+.+++....+. ... |
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID-LSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE-CCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEE-cCCcccc
Confidence 57899999999999999988755433323322 47889999999876554 4 7899999998765332221 111 2
Q ss_pred ccceeEEEEecCCCeEEeeeCCc---------ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511 80 LSAVKAIAWCPWEPTLLATGGGI---------CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG 150 (488)
Q Consensus 80 ~~~v~~l~~~~~~~~l~~~~~~~---------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (488)
...+..++|+|++++++++.... .++.|.+||+.+++..
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~-------------------------------- 128 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR-------------------------------- 128 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--------------------------------
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE--------------------------------
Confidence 33678899999998887775200 0456666666554432
Q ss_pred eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511 151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT 230 (488)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~ 230 (488)
T Consensus 129 -------------------------------------------------------------------------------- 128 (337)
T 1pby_B 129 -------------------------------------------------------------------------------- 128 (337)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc--ccEEEEEecCCEEEEeecC-C---
Q psy14511 231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM--HQVIAMCWNGNLLSCGTIG-G--- 304 (488)
Q Consensus 231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~l~~~~~d-g--- 304 (488)
..+. ....+.+++|+|++++++++ ++.|.+||+.+++....+..+. .++ .+..+++.++..+.. +
T Consensus 129 -~~~~----~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~ 199 (337)
T 1pby_B 129 -KAFE----APRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMA 199 (337)
T ss_dssp -EEEE----CCSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTT-BCCCBCCCCCCCCTTTTEEE
T ss_pred -EEEe----CCCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCCc-eeCCCccEEeeeccCCCcee
Confidence 2222 11234556677777766666 4567777777666655554322 211 222244433332221 1
Q ss_pred --------------------eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccce
Q psy14511 305 --------------------NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGL 364 (488)
Q Consensus 305 --------------------~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~ 364 (488)
.|.+||+.+++.....+..+...+.+++|+|++++++++ ++.|.+||+.+++....+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~ 278 (337)
T 1pby_B 200 TPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPL 278 (337)
T ss_dssp EEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEEC
T ss_pred eeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecC
Confidence 578999988654333445566678899999999999988 79999999988754333321
Q ss_pred ----eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc
Q psy14511 365 ----IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406 (488)
Q Consensus 365 ----~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~ 406 (488)
...+|+|+|+++++ ++.++.|++||+.+++.+..+..+..
T Consensus 279 ~~~~~~~~~s~dg~~l~~--~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 279 PHSYYSVNVSTDGSTVWL--GGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp SSCCCEEEECTTSCEEEE--ESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred CCceeeEEECCCCCEEEE--EcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 12289999999988 46689999999999998888876543
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.8e-23 Score=184.40 Aligned_cols=243 Identities=13% Similarity=0.128 Sum_probs=181.4
Q ss_pred ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-ceeeeeeccc-cccEEEEEe
Q psy14511 215 ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-ERLIQKLRTH-MHQVIAMCW 292 (488)
Q Consensus 215 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-~~~~~~~~~~-~~~v~~~~~ 292 (488)
+.++.|++||+.+++...... +...+.+++|+|++++++++ + ++.|++||+.+ ++.......+ ...+.+++|
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~----~~~~v~~~~~spdg~~l~~~-~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQ----TPELFEAPNWSPDGKYLLLN-S-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEE----ESSCCEEEEECTTSSEEEEE-E-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred CcceeEEEEeCCCCceeeecc----CCcceEeeEECCCCCEEEEE-c-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 368899999999988765554 66789999999999999988 4 78999999998 7776666555 366777788
Q ss_pred --cCCEEEEee--cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEE-EEe-cCeEEEEECC--CCCCCcccc-
Q psy14511 293 --NGNLLSCGT--IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA-SGS-NNTVKIWDFR--QLDAKRPLG- 363 (488)
Q Consensus 293 --~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~-d~~i~iwd~~--~~~~~~~~~- 363 (488)
+++.+++++ .++...+|.+.........+..+. .+..++|+|++++|+ ++. ++.+++|++. +.+......
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 789999988 334455554432222344444443 488899999999888 444 5888999864 332211111
Q ss_pred ---eeeeeecCCCCEEEEEccCCCCeEEEEeCC-CcceeEEEeeccccEEEEEEcCCCCEEEEEeCC-----------Cc
Q psy14511 364 ---LIVPKLKREGRELVTSHGKQDCSLKMWEYP-RLHLIEELKIHQERILSAVLSPDQTCVAAASAD-----------ET 428 (488)
Q Consensus 364 ---~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d-----------g~ 428 (488)
.....|+|+++.++++ +..++.+++|++. .+..+..+..|...+..++|+|++++|++++.+ +.
T Consensus 172 ~~~~~~~~~s~dg~~l~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFN-SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SSCEEEEEECTTSSEEEEE-ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CCccccceECCCCCEEEEE-ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 1123899999998875 4457889999885 566677888888899999999999999998876 56
Q ss_pred EEEEecCCCCcccc---ccccCCcceEEeecCCCceEEEE
Q psy14511 429 ISIWNCFPRDKKRK---ARQVGSGSSLEFAILKQPVSLTA 465 (488)
Q Consensus 429 v~iw~~~~~~~~~~---~~~~~~v~~~~~s~~~~~~~~~~ 465 (488)
|++||+.+++.... ..+...+..+.|+|+++.+....
T Consensus 251 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 251 VQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp EEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred EEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 99999998876533 35678899999999999886554
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=2.2e-22 Score=182.23 Aligned_cols=219 Identities=11% Similarity=0.079 Sum_probs=170.3
Q ss_pred eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc---------cEEEEEe--cCCEEEEee--cCCeEEEEE
Q psy14511 244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH---------QVIAMCW--NGNLLSCGT--IGGNILHYD 310 (488)
Q Consensus 244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~--~~~~l~~~~--~dg~i~i~d 310 (488)
+..++|+|++++++++...++.|.+||..+++.+..+..+.. .+.++.+ +++.+++++ .++.|.+||
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 557899999998777757789999999999888877765432 2567777 677777665 478999999
Q ss_pred CcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce-------e--eeeecCCCCEEEEEc
Q psy14511 311 VRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL-------I--VPKLKREGRELVTSH 380 (488)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~-------~--~~~~~~~~~~l~~~~ 380 (488)
..+.+ ....+..+...+..++|+|+++++++++ ++.+.+||+.+++....+.. . ..+|+|+++.++++
T Consensus 171 ~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~- 248 (353)
T 3vgz_A 171 GGNIK-LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT- 248 (353)
T ss_dssp TTTTE-EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE-
T ss_pred CCCCc-eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE-
Confidence 98753 4455554555578899999999999888 59999999998765443322 1 13899999988775
Q ss_pred cCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCccccccccCCcceEEeecCCC
Q psy14511 381 GKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQ 459 (488)
Q Consensus 381 g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~ 459 (488)
...++.|.+||..+++.+..+..... ..++|+||+++++.++ .++.|.+||+.+++..........+.+++|+|+++
T Consensus 249 ~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGK 326 (353)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSC
T ss_pred eCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCC
Confidence 45679999999999998887775432 5799999999666555 68999999999998876666666789999999999
Q ss_pred ceEEEEe
Q psy14511 460 PVSLTAL 466 (488)
Q Consensus 460 ~~~~~~~ 466 (488)
.+.....
T Consensus 327 ~l~v~~~ 333 (353)
T 3vgz_A 327 TLYVSVK 333 (353)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 7765543
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=3.1e-22 Score=180.69 Aligned_cols=290 Identities=12% Similarity=0.130 Sum_probs=182.2
Q ss_pred eEEEee----cCCeEEEEEccc--CcccceeecccCceEEEEEEccCCcEEEEec---CCeEEEEeccccCcCCCccccc
Q psy14511 7 LLSCGT----IGGNILHYDVRT--HSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPQVNNQ 77 (488)
Q Consensus 7 ~la~g~----~dg~i~iwd~~~--~~~~~~~~~~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~~~~~~~~~~ 77 (488)
.+++|+ .++.|.+|+++. ++........+...+..++|+|||++++++. ++.|.+||+.+++ .+.+..+.
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~-~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQT-AHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTE-EEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCc-EEEeeeee
Confidence 455553 355688887764 4322223345566788899999999444443 5899999997543 22333345
Q ss_pred ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511 78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK 157 (488)
Q Consensus 78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (488)
.+...+..++|+||+++|++++.. ++.+.+|++........+...
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~~g~~~~~~~~--------------------------------- 127 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAADGALTLTDTV--------------------------------- 127 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECTTSCEEEEEEE---------------------------------
T ss_pred cCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCCCCCeeeccee---------------------------------
Confidence 567789999999999988888853 899999998532111111000
Q ss_pred eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecC
Q psy14511 158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYP 237 (488)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~ 237 (488)
....... ...
T Consensus 128 ------------------------------------------------------------------~~~~~~p----~~~ 137 (347)
T 3hfq_A 128 ------------------------------------------------------------------QHSGHGP----RPE 137 (347)
T ss_dssp ------------------------------------------------------------------ECCCCCS----STT
T ss_pred ------------------------------------------------------------------ecCCCCC----Ccc
Confidence 0000000 000
Q ss_pred CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cceee--eeeccc-cccEEEEEe--cCCEEEE-eecCCeEEEEE
Q psy14511 238 TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EERLI--QKLRTH-MHQVIAMCW--NGNLLSC-GTIGGNILHYD 310 (488)
Q Consensus 238 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~~~--~~~~~~-~~~v~~~~~--~~~~l~~-~~~dg~i~i~d 310 (488)
. ....+.+++|+|+++ ++++...++.|.+|++. +++.. ..+..+ ......++| +|+++++ ...++.+.+|+
T Consensus 138 ~-~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 215 (347)
T 3hfq_A 138 Q-DGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLK 215 (347)
T ss_dssp C-SSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred c-cCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 0 344688999999999 55554778899999998 44322 222222 235666777 7885555 56788999999
Q ss_pred CcCCC-cc--ceeeecCC------ccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEE
Q psy14511 311 VRTHS-DY--PTAITREG------DVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTS 379 (488)
Q Consensus 311 ~~~~~-~~--~~~~~~~~------~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~ 379 (488)
+.... .. ...+.... ..+..++|+|||++|+++. ++.|.+|++...
T Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~----------------------- 272 (347)
T 3hfq_A 216 YDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD----------------------- 272 (347)
T ss_dssp EETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG-----------------------
T ss_pred ecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC-----------------------
Confidence 87521 11 11222221 3478899999999875544 377777776521
Q ss_pred ccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC-CcEEEEec--CCCCcc
Q psy14511 380 HGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD-ETISIWNC--FPRDKK 440 (488)
Q Consensus 380 ~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d-g~v~iw~~--~~~~~~ 440 (488)
| +.+.+..+..+...+..++|+|||++|++++.+ +.|.+|++ .+++..
T Consensus 273 -g------------~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 273 -G------------HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp -G------------CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred -C------------cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 0 112344455555668899999999999888765 89999955 455544
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.92 E-value=2.4e-23 Score=206.86 Aligned_cols=312 Identities=13% Similarity=0.081 Sum_probs=196.6
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccCc---eEEEEEEccCCcEEEEecC----------CeEEEEeccccCcC
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD---VVCGLKWSPNGRYLASGSN----------NTVKIWDFRQLDAK 70 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~---~V~~l~~sp~g~~las~~d----------~~i~vwd~~~~~~~ 70 (488)
||++++++ .|+.|++||+.+++.. ..+.+|.. .|.+++|||||++||++++ +.|++||+.+++..
T Consensus 26 dg~~~~~~-~d~~i~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 26 GQEYLHQS-ADNNIVLYNIETGQSY-TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp SSEEEEEC-TTSCEEEEESSSCCEE-EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCeEEEEc-CCCCEEEEEcCCCcEE-EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc
Confidence 88766665 5999999999988743 44555543 3899999999999998863 89999999886542
Q ss_pred CCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511 71 RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG 150 (488)
Q Consensus 71 ~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (488)
... .+ ...+..++|+|||+.|+++. ++.|++|++.+++..........
T Consensus 104 ~~~-~l---~~~~~~~~~SPDG~~la~~~----~~~i~~~~~~~g~~~~l~~~~~~------------------------ 151 (719)
T 1z68_A 104 RGN-EL---PRPIQYLCWSPVGSKLAYVY----QNNIYLKQRPGDPPFQITFNGRE------------------------ 151 (719)
T ss_dssp CSS-CC---CSSBCCEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCCCCBT------------------------
T ss_pred cce-ec---CcccccceECCCCCEEEEEE----CCeEEEEeCCCCCcEEEecCCCc------------------------
Confidence 101 11 24688999999999877764 88999999988765322111100
Q ss_pred eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511 151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT 230 (488)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~ 230 (488)
..+ ++ +..
T Consensus 152 ----------------------------------------------------------~~v-----------~~---g~~ 159 (719)
T 1z68_A 152 ----------------------------------------------------------NKI-----------FN---GIP 159 (719)
T ss_dssp ----------------------------------------------------------TTE-----------EE---SSC
T ss_pred ----------------------------------------------------------CCe-----------Ec---ccc
Confidence 000 00 000
Q ss_pred EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC----------------------------------CcEEEEECCccee
Q psy14511 231 QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----------------------------------EYIDLWHEQEERL 276 (488)
Q Consensus 231 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----------------------------------~~i~i~d~~~~~~ 276 (488)
..+.+.+ ......+++|+|||+.|+++ +.+ ..|++||+.+++.
T Consensus 160 ~~v~~ee--~~~~~~~~~wSPDG~~la~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 160 DWVYEEE--MLATKYALWWSPNGKFLAYA-EFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp CHHHHHH--TTCSSCCEEECTTSSEEEEE-EEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred cceeeee--cccCcccEEECCCCCEEEEE-EECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 0000000 01122467788888777776 332 2788999988764
Q ss_pred e--------eeeccccccEEEEEe--cCCEEEEeecC----CeEEEEE----CcCCCccceee----ecCCccEE-----
Q psy14511 277 I--------QKLRTHMHQVIAMCW--NGNLLSCGTIG----GNILHYD----VRTHSDYPTAI----TREGDVVC----- 329 (488)
Q Consensus 277 ~--------~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~----~~~~~~i~----- 329 (488)
. ..+.+|...+..++| |++++++.... ..|.+|| +.+++ ..... ..|...+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD-CPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE-CCGGGEEEEECSSSCSSSSSCC
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc-eEEEEecccccCCceEccccCC
Confidence 2 223467888999999 66666664433 2488899 66543 33333 35555555
Q ss_pred EEEEccCCcEEEEE-e--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc
Q psy14511 330 GLKWSPNGRYLASG-S--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406 (488)
Q Consensus 330 ~~~~s~~~~~l~~~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~ 406 (488)
.++|+|||+.|+.. + ++. ..|++||+.+++ ...+..+..
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~-------------------------------------~~l~~~~~~~~~-~~~lt~~~~ 357 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGY-------------------------------------KHIHYIKDTVEN-AIQITSGKW 357 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSC-------------------------------------EEEEEESSCSTT-CEECSCSSS
T ss_pred ccEECCCCCeEEEEEEccCCc-------------------------------------eEEEEEECCCCc-eEecccCce
Confidence 77899998866542 2 121 234444544444 344555555
Q ss_pred cEEEEEEcCCCCEEEEEeCC-----CcEEEEecCC--CC--ccccc----cccCCcceEEeecCCCceEEE
Q psy14511 407 RILSAVLSPDQTCVAAASAD-----ETISIWNCFP--RD--KKRKA----RQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 407 ~v~~~~~s~~~~~l~t~~~d-----g~v~iw~~~~--~~--~~~~~----~~~~~v~~~~~s~~~~~~~~~ 464 (488)
.+..+.++ +++.|+..+.+ +..++|.+.. +. ...+. .+...+..+.|+|+++.+.+.
T Consensus 358 ~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 358 EAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp CEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred EEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEE
Confidence 67777777 88877776655 8889998864 32 12221 144567789999999987654
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=1.1e-23 Score=209.67 Aligned_cols=305 Identities=12% Similarity=0.081 Sum_probs=201.3
Q ss_pred eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc---ceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511 38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS---AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN 114 (488)
Q Consensus 38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~ 114 (488)
.+.+++|+|||++++++.|+.|++||+.+++... .+.+|.. .|.+++|+|||++|+++.. ++.+. .
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~---~~~~~~~~~~~v~~~~~SpDg~~l~~~~~---~~~~~--~--- 86 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTV---LIEGKKIESLRAIRYEISPDREYALFSYN---VEPIY--Q--- 86 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEE---EECTTTTTTTTCSEEEECTTSSEEEEEES---CCCCS--S---
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEE---EeccccccccccceEEECCCCCEEEEEec---Cccce--e---
Confidence 4678999999998887559999999999865432 2344543 4999999999998888765 32110 0
Q ss_pred CeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCC
Q psy14511 115 GKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPS 194 (488)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (488)
.
T Consensus 87 ~------------------------------------------------------------------------------- 87 (723)
T 1xfd_A 87 H------------------------------------------------------------------------------- 87 (723)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511 195 IINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE 274 (488)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~ 274 (488)
+.++.+++||+.+++...+....+ +...+..++|+|||+.|+++ + ++.|++||+.++
T Consensus 88 --------------------~~~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~-~-~~~i~~~~~~~g 144 (723)
T 1xfd_A 88 --------------------SYTGYYVLSKIPHGDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFI-F-ENNIYYCAHVGK 144 (723)
T ss_dssp --------------------CCCSEEEEEESSSCCCEECCCTTC-CSCCCSBCCBCSSTTCEEEE-E-TTEEEEESSSSS
T ss_pred --------------------cceeeEEEEECCCCceEeccCCcc-ccccccccEECCCCCEEEEE-E-CCeEEEEECCCC
Confidence 012334444444443321111111 44457789999999999998 4 379999999987
Q ss_pred eeeeeeccccccE------------------EEEEe--cCCEEEEeecC-CeEEEEECcCCCccceeeecCCccEEEEEE
Q psy14511 275 RLIQKLRTHMHQV------------------IAMCW--NGNLLSCGTIG-GNILHYDVRTHSDYPTAITREGDVVCGLKW 333 (488)
Q Consensus 275 ~~~~~~~~~~~~v------------------~~~~~--~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~ 333 (488)
+.......+...+ .++.| ||+.|++++.+ +.+.+|++...... +...+..+.|
T Consensus 145 ~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 218 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS------IYPTVKPYHY 218 (723)
T ss_dssp CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS------SSCCCEEEEC
T ss_pred ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc------CCCcceeccC
Confidence 7666555433322 66777 78888888755 46777877543211 2234778899
Q ss_pred ccCCcEEEEEecCeEEEEECCCCCCCcccce---------e--eeeecCCCCEEEEEcc--CCCCeEEEEeCCCcceeEE
Q psy14511 334 SPNGRYLASGSNNTVKIWDFRQLDAKRPLGL---------I--VPKLKREGRELVTSHG--KQDCSLKMWEYPRLHLIEE 400 (488)
Q Consensus 334 s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~---------~--~~~~~~~~~~l~~~~g--~~~~~i~i~d~~~~~~~~~ 400 (488)
+++|.. ..+..|++||+.+++....+.. . ...|+|||+.+++... ..+..|++||+.+++....
T Consensus 219 ~~~G~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 219 PKAGSE---NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp CBTTSC---CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred CCCCCC---CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 988863 1236899999988764332221 1 2389999998876432 2446899999999987766
Q ss_pred Eeec-cccE----EEEEEcCCCCEEEEE--eCCC------cEEEEe-cCCCC---ccccccccCCcce-EEeecCCCceE
Q psy14511 401 LKIH-QERI----LSAVLSPDQTCVAAA--SADE------TISIWN-CFPRD---KKRKARQVGSGSS-LEFAILKQPVS 462 (488)
Q Consensus 401 ~~~~-~~~v----~~~~~s~~~~~l~t~--~~dg------~v~iw~-~~~~~---~~~~~~~~~~v~~-~~~s~~~~~~~ 462 (488)
+..+ ...+ ..++|||||+.|+.. ..|+ .|++|| ..+++ ...+......+.. ++|+||++.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~ 375 (723)
T 1xfd_A 296 HEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIY 375 (723)
T ss_dssp EEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEE
T ss_pred EEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEE
Confidence 6543 3334 378999999987754 4667 577777 44554 3333333444544 68999999886
Q ss_pred EE
Q psy14511 463 LT 464 (488)
Q Consensus 463 ~~ 464 (488)
+.
T Consensus 376 ~~ 377 (723)
T 1xfd_A 376 FL 377 (723)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=1.2e-21 Score=177.86 Aligned_cols=307 Identities=12% Similarity=0.104 Sum_probs=190.5
Q ss_pred ceEEEee----cCCeEEEEEccc--CcccceeecccCceEEEEEEccCCcEEEEec-C----CeEEEEecccc-CcCCCc
Q psy14511 6 NLLSCGT----IGGNILHYDVRT--HSDYPTAITREGDVVCGLKWSPNGRYLASGS-N----NTVKIWDFRQL-DAKRPQ 73 (488)
Q Consensus 6 ~~la~g~----~dg~i~iwd~~~--~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d----~~i~vwd~~~~-~~~~~~ 73 (488)
.++.+|+ .++.|.+|++.. ++....... +...+..++|+|||++|++++ + +.|.+|++... .....+
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 4556664 356899997753 432222222 677788899999999999887 4 79999998752 112233
Q ss_pred ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511 74 VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153 (488)
Q Consensus 74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (488)
.....+......+++ ++++++++... ++.+.+|++.....+......
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~--~~~v~~~~~~~~g~~~~~~~~----------------------------- 139 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYS--GGSITVFPIGQDGALLPASDV----------------------------- 139 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETT--TTEEEEEEBCTTSCBCSCSEE-----------------------------
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECC--CCEEEEEEeCCCCcCccccee-----------------------------
Confidence 333334456777777 78888888764 899999999754322111000
Q ss_pred cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~ 233 (488)
.... ..+.
T Consensus 140 -----~~~~---------------------------------------------------------------g~~~---- 147 (361)
T 3scy_A 140 -----IEFK---------------------------------------------------------------GSGP---- 147 (361)
T ss_dssp -----EECC---------------------------------------------------------------CCCS----
T ss_pred -----EEcc---------------------------------------------------------------CCCC----
Confidence 0000 0000
Q ss_pred EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee------e-------eeeccccccEEEEEe--cCCEEE
Q psy14511 234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL------I-------QKLRTHMHQVIAMCW--NGNLLS 298 (488)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~------~-------~~~~~~~~~v~~~~~--~~~~l~ 298 (488)
..... +...+.+++|+|+|+++++++..++.|.+|++..... + .....+......++| ++++++
T Consensus 148 ~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 226 (361)
T 3scy_A 148 DKERQ-TMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAY 226 (361)
T ss_dssp CTTTC-SSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred Ccccc-CCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEE
Confidence 00000 3345788999999998887756789999998875331 1 112223445677888 788777
Q ss_pred Eee-cCCeEEEEECcCCCc-cceee---ecCCccEEEEEEccCCcEEEEEe-c--CeEEEEECCCCCCCcccceeeeeec
Q psy14511 299 CGT-IGGNILHYDVRTHSD-YPTAI---TREGDVVCGLKWSPNGRYLASGS-N--NTVKIWDFRQLDAKRPLGLIVPKLK 370 (488)
Q Consensus 299 ~~~-~dg~i~i~d~~~~~~-~~~~~---~~~~~~i~~~~~s~~~~~l~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~~~ 370 (488)
+++ .++.|.+|++.++.. ....+ ..+......++|+|||++|+++. + +.|.+|++...
T Consensus 227 v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-------------- 292 (361)
T 3scy_A 227 LINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-------------- 292 (361)
T ss_dssp EEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT--------------
T ss_pred EEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC--------------
Confidence 766 689999999985431 11112 22334467899999999887664 3 56777766421
Q ss_pred CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecC--CCCcccc--ccc
Q psy14511 371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCF--PRDKKRK--ARQ 445 (488)
Q Consensus 371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~--~~~~~~~--~~~ 445 (488)
++. .+.+..+.. ...+..++|+|||++|++++ .++.|.+|+++ +++.... ..+
T Consensus 293 -------------~g~--------~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~ 350 (361)
T 3scy_A 293 -------------NGT--------LTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIK 350 (361)
T ss_dssp -------------TCC--------EEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEE
T ss_pred -------------CCc--------EEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeee
Confidence 111 112333333 34678899999999998887 67899996554 5555432 224
Q ss_pred cCCcceEEee
Q psy14511 446 VGSGSSLEFA 455 (488)
Q Consensus 446 ~~~v~~~~~s 455 (488)
...+.++.|.
T Consensus 351 ~~~p~~v~~~ 360 (361)
T 3scy_A 351 VDKPVCLKFV 360 (361)
T ss_dssp CSSEEEEEEE
T ss_pred CCCCeEEEEc
Confidence 4566777775
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=3.5e-22 Score=179.67 Aligned_cols=262 Identities=13% Similarity=0.042 Sum_probs=193.0
Q ss_pred cEEEEECCCeEEEEECCCCceEEEEecCCCCCC-ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc-----
Q psy14511 210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA-YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH----- 283 (488)
Q Consensus 210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~----- 283 (488)
.+++++.++.|++||..+++....+... +.. .+..++|+|+++.+++++..++.|.+||+.+++.+..+...
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIA--DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECT--TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcC--CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 3677789999999999999887776643 211 47889999999888776577899999999998877766531
Q ss_pred cccEEEEEe--cCCEEEEee------------cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEE
Q psy14511 284 MHQVIAMCW--NGNLLSCGT------------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 349 (488)
Q Consensus 284 ~~~v~~~~~--~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~ 349 (488)
...+..+++ +++.++++. .++.|.+||+.+++ ....+.. ...+..++|+|++++|+++ ++.|.
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-~~~~~~~-~~~~~~~~~s~dg~~l~~~-~~~i~ 157 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFEA-PRQITMLAWARDGSKLYGL-GRDLH 157 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEEC-CSSCCCEEECTTSSCEEEE-SSSEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-EEEEEeC-CCCcceeEECCCCCEEEEe-CCeEE
Confidence 124455666 688888876 57999999998753 3334433 3457789999999988887 78999
Q ss_pred EEECCCCCCCccccee----eeeecCCCCEEEEEccCCCC-----------------------eEEEEeCCCccee-EEE
Q psy14511 350 IWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDC-----------------------SLKMWEYPRLHLI-EEL 401 (488)
Q Consensus 350 iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~-----------------------~i~i~d~~~~~~~-~~~ 401 (488)
+||+.+++....+... ...|+|+++.+++. +..++ .|.+||+.+++.. ..+
T Consensus 158 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 236 (337)
T 1pby_B 158 VMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ-HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC-CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred EEECCCCcEeeeeeccccCCCceeCCCccEEeee-ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeec
Confidence 9999887544322211 22889999887663 22333 4789999998764 234
Q ss_pred eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeecccccceeeEEEE
Q psy14511 402 KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAY 481 (488)
Q Consensus 402 ~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~ 481 (488)
..+...+.+++|+||+++|+++ ++.|++||+.+++..........+.+++|+|+++.+... ..+..+.++.
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-------~~~~~i~v~d 307 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-------GALGDLAAYD 307 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-------SBSSEEEEEE
T ss_pred CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE-------cCCCcEEEEE
Confidence 4566678899999999999988 799999999998877665566778999999999876442 2234555565
Q ss_pred eeccc
Q psy14511 482 TVFGE 486 (488)
Q Consensus 482 ~~~g~ 486 (488)
.++|+
T Consensus 308 ~~~~~ 312 (337)
T 1pby_B 308 AETLE 312 (337)
T ss_dssp TTTCC
T ss_pred CcCCc
Confidence 55554
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=1.5e-21 Score=175.11 Aligned_cols=245 Identities=11% Similarity=0.061 Sum_probs=179.9
Q ss_pred EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee-eeeeccccccEEE
Q psy14511 211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL-IQKLRTHMHQVIA 289 (488)
Q Consensus 211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~v~~ 289 (488)
+++...++.|.+||..+++....... +...+ .++|+|+++++++++..++.|.+||..+++. ...+..+..+..+
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITL---GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD 88 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEEC---CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC
T ss_pred EEEecCCCeEEEEeCcccceeeeEEc---cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc
Confidence 44455889999999999988777664 44556 9999999998888756689999999998887 6666666666554
Q ss_pred EEe--cCCEEEEeecCC---eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-Ce-EEEEECCCCCCCcc
Q psy14511 290 MCW--NGNLLSCGTIGG---NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NT-VKIWDFRQLDAKRP 361 (488)
Q Consensus 290 ~~~--~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~-i~iwd~~~~~~~~~ 361 (488)
+++ ++++++++..++ .|.+||+.+++ ....+..+ .....++|+|+|+++++++ + +. +.+|++........
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-FISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTE-EEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCC-eEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 676 788888665553 89999998754 44444443 3468999999998666654 4 77 99999875432111
Q ss_pred c---------ceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcce---eEEEeeccccEEEEEEcCCCCEEEEEe-CCCc
Q psy14511 362 L---------GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHL---IEELKIHQERILSAVLSPDQTCVAAAS-ADET 428 (488)
Q Consensus 362 ~---------~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~ 428 (488)
. .....+|+|+|++++++ +..++.|++||+.+++. +..+..+ ..+..++|+|||++|+.++ .++.
T Consensus 167 ~~~~~~~~~~~~~~~~~spdg~~l~v~-~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 167 TGQEFISGGTRPFNITFTPDGNFAFVA-NLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVD 244 (331)
T ss_dssp EEEEEECSSSSEEEEEECTTSSEEEEE-ETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEE
T ss_pred cCCccccCCCCccceEECCCCCEEEEE-eCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCE
Confidence 1 01122899999987765 56789999999999988 7777644 5678999999999776655 5788
Q ss_pred EEEEecCCCCcccc----------ccccCCcceEEeecCCCceEE
Q psy14511 429 ISIWNCFPRDKKRK----------ARQVGSGSSLEFAILKQPVSL 463 (488)
Q Consensus 429 v~iw~~~~~~~~~~----------~~~~~~v~~~~~s~~~~~~~~ 463 (488)
|.+||+.+++.... .........++|+|+++.+..
T Consensus 245 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 289 (331)
T 3u4y_A 245 VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI 289 (331)
T ss_dssp EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE
Confidence 99999998876211 111122355899999998744
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=2.6e-21 Score=187.19 Aligned_cols=181 Identities=12% Similarity=0.025 Sum_probs=132.2
Q ss_pred eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecC----CeEEEEECcCCCccce
Q psy14511 244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIG----GNILHYDVRTHSDYPT 319 (488)
Q Consensus 244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~ 319 (488)
....+|+|+++.++..+..++.+.+||+.+++.......+. .-..++.||+.+++++.+ +.|++||+.+++ ..
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--~~ 188 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--LR 188 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--CE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--ce
Confidence 33567888886544332555666699998876655544333 333344489999988877 789999998754 44
Q ss_pred eeecCCccEEEEEEccCCcEEEEEe-cC--eEEEEECCCCCCCcccceee-----ee--------ecCCCCEEEEEccCC
Q psy14511 320 AITREGDVVCGLKWSPNGRYLASGS-NN--TVKIWDFRQLDAKRPLGLIV-----PK--------LKREGRELVTSHGKQ 383 (488)
Q Consensus 320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~--~i~iwd~~~~~~~~~~~~~~-----~~--------~~~~~~~l~~~~g~~ 383 (488)
.+..|...+..++|||||++|+++. ++ .|++||+.+++.. .+.... .. |+|||..+++ +..
T Consensus 189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~--~~~ 265 (582)
T 3o4h_A 189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVV--ARR 265 (582)
T ss_dssp EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEE--EEE
T ss_pred EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEE--EEc
Confidence 6778888899999999999999666 46 8999999887654 222211 15 9999966666 678
Q ss_pred CCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCC---cEEEEecCC
Q psy14511 384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADE---TISIWNCFP 436 (488)
Q Consensus 384 ~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---~v~iw~~~~ 436 (488)
++.+++|++ ++... .+.+.+.+++|+ |++++++++.+. .+++|+..+
T Consensus 266 ~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 266 EGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp TTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred CCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 999999999 66544 344678999999 999999988774 477777654
No 152
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=9.7e-22 Score=177.22 Aligned_cols=188 Identities=9% Similarity=0.098 Sum_probs=125.8
Q ss_pred ceEEEEEcCCCCeEEEEeCCCCcEEEEEC---CcceeeeeeccccccEEEEEe--cCCEEEEee-cCCeEEEEECcCCCc
Q psy14511 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHE---QEERLIQKLRTHMHQVIAMCW--NGNLLSCGT-IGGNILHYDVRTHSD 316 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~i~d~~~~~~ 316 (488)
.+..++|+|+++++++++..++.|.+||+ ...+....+..+ ..+.+++| +++.+++++ .++.|++||+.+...
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 57789999999988887566899999999 444455555443 34667777 677777777 899999999987332
Q ss_pred cce----eee-cCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEE
Q psy14511 317 YPT----AIT-REGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKM 389 (488)
Q Consensus 317 ~~~----~~~-~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i 389 (488)
... ... .....+..++|+|+++++++++ ++.+.+|++.... +.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~---------------------------g~~~~ 216 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH---------------------------GNIEC 216 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT---------------------------SCCEE
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC---------------------------CcEEE
Confidence 221 122 2344688899999999776665 4889999885321 00000
Q ss_pred EeCCCcceeEEEe---eccccEEEEEEcCCCCEEEE-EeCCCcEEEEecC--CCCc--cccccccCCcceEEeecCCCce
Q psy14511 390 WEYPRLHLIEELK---IHQERILSAVLSPDQTCVAA-ASADETISIWNCF--PRDK--KRKARQVGSGSSLEFAILKQPV 461 (488)
Q Consensus 390 ~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~t-~~~dg~v~iw~~~--~~~~--~~~~~~~~~v~~~~~s~~~~~~ 461 (488)
. +....+. .....+..++|+||+++|++ +..|+.|.+|++. +++. .........+..++|+|+++.+
T Consensus 217 ~-----~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 291 (343)
T 1ri6_A 217 V-----QTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYL 291 (343)
T ss_dssp E-----EEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEE
T ss_pred E-----eeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEE
Confidence 0 0000011 11235778999999998875 4578999999998 3322 2223334458899999999876
Q ss_pred EE
Q psy14511 462 SL 463 (488)
Q Consensus 462 ~~ 463 (488)
..
T Consensus 292 ~~ 293 (343)
T 1ri6_A 292 IA 293 (343)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=1.2e-21 Score=177.11 Aligned_cols=108 Identities=11% Similarity=0.022 Sum_probs=76.7
Q ss_pred ccCCceEEEeecCCeEEEEEcccCcccceeecccC-ceEEEEEEccCCcEEEEe-c-CCeEEEEeccccCcCCCcccccc
Q psy14511 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASG-S-NNTVKIWDFRQLDAKRPQVNNQC 78 (488)
Q Consensus 2 ~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~g~~las~-~-d~~i~vwd~~~~~~~~~~~~~~~ 78 (488)
+.+++++++++.++.|.+||+.+++.+. .+..+. ..+..++|+|+|++++.+ . ++.|.+||+.+++....+. . .
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~-~-~ 84 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVYK-SCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN-L-S 84 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEEE-EEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-S-C
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEEE-EEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE-c-c
Confidence 3478899999999999999999887543 333332 257889999999866544 4 8999999998755332221 1 1
Q ss_pred c-----ccceeEEEEecCCCeEEeeeCCccc------------ceEEEEecCCC
Q psy14511 79 H-----LSAVKAIAWCPWEPTLLATGGGICD------------QTVRLWNSMNG 115 (488)
Q Consensus 79 h-----~~~v~~l~~~~~~~~l~~~~~~~~d------------~~i~vwd~~~~ 115 (488)
+ ...+..++|+|||++++++.. + +.|.+||+.++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVN---PTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEE---EEEECSSCEEECCCEEEEEEGGGG
T ss_pred cccccccccccceEECCCCCEEEEEcc---cccccccccccCCCeEEEEECCCc
Confidence 2 234789999999998888774 4 56666666543
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=6e-21 Score=189.50 Aligned_cols=358 Identities=9% Similarity=0.011 Sum_probs=205.7
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccCce-----EEEEEEccCCcEEEEec-C---------CeEEEEeccccC
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV-----VCGLKWSPNGRYLASGS-N---------NTVKIWDFRQLD 68 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~-----V~~l~~sp~g~~las~~-d---------~~i~vwd~~~~~ 68 (488)
||++|+++ ||+|++||+.+++.. ..+.+|... ...++|||||++|++++ + +.+.+||+.+++
T Consensus 27 dg~~~~~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~ 103 (740)
T 4a5s_A 27 DHEYLYKQ--ENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ 103 (740)
T ss_dssp SSEEEEEE--TTEEEEEETTTCCEE-EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCcEEEEc--CCcEEEEECCCCceE-EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc
Confidence 89999986 999999999998853 556666532 23478899999999987 3 677899999865
Q ss_pred cCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEE
Q psy14511 69 AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLL 148 (488)
Q Consensus 69 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (488)
... +..|.+.+...+|||||+.|+.+ . ++.|++|++.+++..+....... .. .+
T Consensus 104 ~~~----l~~~~~~~~~~~~SPdG~~la~~-~---~~~i~~~~~~~~~~~~lt~~g~~-~~--~~--------------- 157 (740)
T 4a5s_A 104 LIT----EERIPNNTQWVTWSPVGHKLAYV-W---NNDIYVKIEPNLPSYRITWTGKE-DI--IY--------------- 157 (740)
T ss_dssp ECC----SSCCCTTEEEEEECSSTTCEEEE-E---TTEEEEESSTTSCCEECCSCCBT-TT--EE---------------
T ss_pred EEE----cccCCCcceeeEECCCCCEEEEE-E---CCeEEEEECCCCceEEEcCCCCc-cc--ee---------------
Confidence 332 45577889999999999988776 4 88999999988764332111100 00 00
Q ss_pred eeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCe-EEEEECCC
Q psy14511 149 HGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTS-VYTWNTKT 227 (488)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-v~iw~~~~ 227 (488)
.|. .-+.+.+ .++ .....+.|++ ||+ |.....+.
T Consensus 158 ~g~-----~~~v~~e------------------------e~~--------~~~~~~~wSp--------Dg~~la~~~~d~ 192 (740)
T 4a5s_A 158 NGI-----TDWVYEE------------------------EVF--------SAYSALWWSP--------NGTFLAYAQFND 192 (740)
T ss_dssp ESB-----CCHHHHH------------------------HTS--------SSSBCEEECT--------TSSEEEEEEEEC
T ss_pred cCc-----ccccccc------------------------hhc--------CCCcceEECC--------CCCEEEEEEEcc
Confidence 000 0000000 000 0000122322 222 21111111
Q ss_pred C--ceEEEEecCCC--CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc---ce--eeeeec------cccccEEEEEe
Q psy14511 228 N--KTQLLVEYPTY--DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE---ER--LIQKLR------THMHQVIAMCW 292 (488)
Q Consensus 228 ~--~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~---~~--~~~~~~------~~~~~v~~~~~ 292 (488)
. ........... +......+.+.+.|.. .....|++||+.+ ++ ....+. +|...+..++|
T Consensus 193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~-----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w 267 (740)
T 4a5s_A 193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV-----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTW 267 (740)
T ss_dssp TTCCEEEEEECCSTTCSSCEEEEEECCBTTSC-----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEE
T ss_pred cCCceEEEEeecCCCCCCCcceeecCCCCcCc-----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEE
Confidence 1 11111111000 1233445555555432 1223688999988 63 222332 37778888888
Q ss_pred --cCCEEEEeec----CCeEEEEECcCCC----c-cceee--ecCCccEE-----EEEEccCCcEEE-EEe--c--CeEE
Q psy14511 293 --NGNLLSCGTI----GGNILHYDVRTHS----D-YPTAI--TREGDVVC-----GLKWSPNGRYLA-SGS--N--NTVK 349 (488)
Q Consensus 293 --~~~~l~~~~~----dg~i~i~d~~~~~----~-~~~~~--~~~~~~i~-----~~~~s~~~~~l~-~~~--d--~~i~ 349 (488)
|++.++.... +..|++||+.+++ . ....+ ..+...+. .++|+|||+.|+ ..+ + ..|.
T Consensus 268 spdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~ 347 (740)
T 4a5s_A 268 ATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHIC 347 (740)
T ss_dssp EETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEE
T ss_pred eCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEE
Confidence 7876665533 2379999998865 1 11222 34544443 688999999877 665 2 5688
Q ss_pred EEECCCCCCCccccee---eeeecCCCCEEEEEccC---CC--CeEEEEeCCCcceeEEEee----ccccEEEEEEcCCC
Q psy14511 350 IWDFRQLDAKRPLGLI---VPKLKREGRELVTSHGK---QD--CSLKMWEYPRLHLIEELKI----HQERILSAVLSPDQ 417 (488)
Q Consensus 350 iwd~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~---~~--~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~ 417 (488)
+||+..++..+..... ...+.+|++.++..+.. .. ..|+..++..++....+.. .......+.||||+
T Consensus 348 ~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg 427 (740)
T 4a5s_A 348 YFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEA 427 (740)
T ss_dssp EEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTS
T ss_pred EEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCC
Confidence 8998866443322111 11344667777665222 12 3455556555443323432 23568899999999
Q ss_pred CEEEEEeCC---CcEEEEecCCCCcc
Q psy14511 418 TCVAAASAD---ETISIWNCFPRDKK 440 (488)
Q Consensus 418 ~~l~t~~~d---g~v~iw~~~~~~~~ 440 (488)
++++..... ..+.+++..+++..
T Consensus 428 ~~~~~~~s~~~~p~~~l~~~~~~~~~ 453 (740)
T 4a5s_A 428 KYYQLRCSGPGLPLYTLHSSVNDKGL 453 (740)
T ss_dssp SEEEEEECSBSSCEEEEEETTTTEEE
T ss_pred CEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 987655433 46888888776543
No 155
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.8e-20 Score=173.05 Aligned_cols=230 Identities=13% Similarity=0.148 Sum_probs=153.7
Q ss_pred cCCceEEEeecCCeEEEEEcccCcc----------c----ceeecccCceEEEEEEccCCcEEE----Eec-CCeEEEEe
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSD----------Y----PTAITREGDVVCGLKWSPNGRYLA----SGS-NNTVKIWD 63 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~----------~----~~~~~~h~~~V~~l~~sp~g~~la----s~~-d~~i~vwd 63 (488)
.++.++++|+.++ ++||+...... + ......|...|.+++|+|+|++|| +++ |+.|+|||
T Consensus 46 ~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd 124 (434)
T 2oit_A 46 NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFD 124 (434)
T ss_dssp TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEE
Confidence 3678889888887 88987642110 0 011123566799999999999999 677 99999999
Q ss_pred cccc-----Cc---CCCcccccccccceeEEEEecC-CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccc
Q psy14511 64 FRQL-----DA---KRPQVNNQCHLSAVKAIAWCPW-EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETIS 134 (488)
Q Consensus 64 ~~~~-----~~---~~~~~~~~~h~~~v~~l~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 134 (488)
+.+. +. ...+..+.+|...|.+++|+|+ +..+++++. |++|++||+.++.....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~---Dg~v~iwD~~~~~~~~~-------------- 187 (434)
T 2oit_A 125 VRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA---DGSIAVLQVTETVKVCA-------------- 187 (434)
T ss_dssp HHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET---TSCEEEEEESSSEEEEE--------------
T ss_pred ccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC---CCeEEEEEcCCCcceee--------------
Confidence 9865 11 1123456779999999999998 544544554 99999999976642110
Q ss_pred ccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEE
Q psy14511 135 YREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAV 214 (488)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (488)
T Consensus 188 -------------------------------------------------------------------------------- 187 (434)
T 2oit_A 188 -------------------------------------------------------------------------------- 187 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-------ccccE
Q psy14511 215 ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-------HMHQV 287 (488)
Q Consensus 215 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-------~~~~v 287 (488)
..+ |...+.+++|+|+|++|+++ +.||.|++||.+ ++....+.. |...+
T Consensus 188 ---------------------~~~-~~~~v~~v~wspdg~~lasg-s~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v 243 (434)
T 2oit_A 188 ---------------------TLP-STVAVTSVCWSPKGKQLAVG-KQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV 243 (434)
T ss_dssp ---------------------EEC-GGGCEEEEEECTTSSCEEEE-ETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE
T ss_pred ---------------------ccC-CCCceeEEEEcCCCCEEEEE-cCCCcEEEEccC-CcccccccCCcccCCCCceeE
Confidence 011 56689999999999999999 899999999998 444444433 23488
Q ss_pred EEEEec--CCEEEE-eecCC------eEEEEECcCCCcc-ceeee----------cCCccEEEEEEccCCcEEEEEe-c-
Q psy14511 288 IAMCWN--GNLLSC-GTIGG------NILHYDVRTHSDY-PTAIT----------REGDVVCGLKWSPNGRYLASGS-N- 345 (488)
Q Consensus 288 ~~~~~~--~~~l~~-~~~dg------~i~i~d~~~~~~~-~~~~~----------~~~~~i~~~~~s~~~~~l~~~~-d- 345 (488)
.+++|+ +.++++ ...+| .+++|+++..+.. ...+. ....+-..+.+-++.+++++++ .
T Consensus 244 ~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s 323 (434)
T 2oit_A 244 LDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAS 323 (434)
T ss_dssp EEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTC
T ss_pred EEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCC
Confidence 999993 344433 33333 3899999864311 11111 1122223344447777777776 3
Q ss_pred CeEEEEECC
Q psy14511 346 NTVKIWDFR 354 (488)
Q Consensus 346 ~~i~iwd~~ 354 (488)
+.|.++...
T Consensus 324 ~dv~vl~~~ 332 (434)
T 2oit_A 324 TEVSILARQ 332 (434)
T ss_dssp SBCEEEEEC
T ss_pred CceeEEEec
Confidence 777777754
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=5.3e-20 Score=166.02 Aligned_cols=237 Identities=12% Similarity=0.124 Sum_probs=158.9
Q ss_pred ccCCceEEEeec--CCeEEEEEcccCccc-ceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccc
Q psy14511 2 CWNGNLLSCGTI--GGNILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNN 76 (488)
Q Consensus 2 ~~dg~~la~g~~--dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~ 76 (488)
+.||++++++.. ++.|.+||+.+++.. ...+..+...+..++|+|||++|++++ ++.|.+|++........+...
T Consensus 48 spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~ 127 (347)
T 3hfq_A 48 SAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTV 127 (347)
T ss_dssp CTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred ccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeeccee
Confidence 348884444432 689999999766521 223345777889999999999888876 799999999632212222211
Q ss_pred cc---------cccceeEEEEecCCCeEEeeeCCcccceEEEEecC-CCeeeeeeecCCCccccccccccccccceeEEE
Q psy14511 77 QC---------HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM-NGKEKCHVKTDSQQANDETISYREQKKRRHLSF 146 (488)
Q Consensus 77 ~~---------h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (488)
.. +...+.+++|+|||+ ++++... ++.|.+|++. +++....
T Consensus 128 ~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~--~~~v~~~~~~~~g~~~~~-------------------------- 178 (347)
T 3hfq_A 128 QHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG--SDKVYVYNVSDAGQLSEQ-------------------------- 178 (347)
T ss_dssp ECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--TTEEEEEEECTTSCEEEE--------------------------
T ss_pred ecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--CCEEEEEEECCCCcEEEe--------------------------
Confidence 11 223488999999998 7777664 8899999987 3331100
Q ss_pred EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC
Q psy14511 147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226 (488)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~ 226 (488)
T Consensus 179 -------------------------------------------------------------------------------- 178 (347)
T 3hfq_A 179 -------------------------------------------------------------------------------- 178 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc--cee--eeeecccc------ccEEEEEe--cC
Q psy14511 227 TNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE--ERL--IQKLRTHM------HQVIAMCW--NG 294 (488)
Q Consensus 227 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~--~~ 294 (488)
...... ....+..++|+|+|+++++++..++.+.+|++.. ++. +..+.... ..+..++| +|
T Consensus 179 -----~~~~~~--~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 179 -----SVLTME--AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp -----EEEECC--TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred -----eeEEcC--CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 000110 2234678999999998887657889999999874 432 22232222 34777888 78
Q ss_pred CEE-EEeecCCeEEEEECcCCC--ccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECC
Q psy14511 295 NLL-SCGTIGGNILHYDVRTHS--DYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFR 354 (488)
Q Consensus 295 ~~l-~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~ 354 (488)
++| ++...++.|.+|++.... .....+..+...+..++|+|||++|++++ + +.+.+|++.
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 877 455668999999997432 23344455555678999999999988887 4 899999664
No 157
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.88 E-value=3.5e-20 Score=167.04 Aligned_cols=213 Identities=9% Similarity=0.056 Sum_probs=151.1
Q ss_pred ceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeee-eccccccEEEEEec-CCEEEEeecCCeEEEEECcCCCccc-
Q psy14511 243 YISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQK-LRTHMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYP- 318 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~- 318 (488)
....++++|+|++|+++... ++.|.+||+.+++.+.. +.........+..+ +..+++.+.||.+.+|++.......
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~ 188 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVAS 188 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEE
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEee
Confidence 45578999999999998333 68999999999988877 65322111112223 3678888999999999986533222
Q ss_pred -----eeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCC--ccc---------------ceeeeeecCCCCE
Q psy14511 319 -----TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK--RPL---------------GLIVPKLKREGRE 375 (488)
Q Consensus 319 -----~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~--~~~---------------~~~~~~~~~~~~~ 375 (488)
..+.....++ .+.++|++..++..+ ++.+.++|+...... ..+ .....+++|+++.
T Consensus 189 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 189 QSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp EEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred eccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence 1122222222 344567787777766 589999998654211 000 0011378999888
Q ss_pred EEEEcc--C-------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC--Ccccc-c
Q psy14511 376 LVTSHG--K-------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPR--DKKRK-A 443 (488)
Q Consensus 376 l~~~~g--~-------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~--~~~~~-~ 443 (488)
++++.. . ..+.|.+||+.+++.+.++..+. +.+++|+|||++|++++. +.|.+||..++ +.... .
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~ 344 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE 344 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec
Confidence 887532 1 13589999999999999998877 999999999999998887 99999999999 76655 3
Q ss_pred cccCCcceEEeecCCC
Q psy14511 444 RQVGSGSSLEFAILKQ 459 (488)
Q Consensus 444 ~~~~~v~~~~~s~~~~ 459 (488)
........++++|+|.
T Consensus 345 ~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 345 GAAEASLQVQFHPVGG 360 (361)
T ss_dssp TSCSSEEEEEECCCSC
T ss_pred cCCCCcEEEEecCCCC
Confidence 5667778999999886
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=3.7e-20 Score=169.89 Aligned_cols=290 Identities=10% Similarity=0.044 Sum_probs=188.4
Q ss_pred EEEcccCcccceeecccCceEEE-----EEEccCCcEEEEec--CC--eEEEEeccccCcCCCcccccccccceeEEEEe
Q psy14511 19 HYDVRTHSDYPTAITREGDVVCG-----LKWSPNGRYLASGS--NN--TVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWC 89 (488)
Q Consensus 19 iwd~~~~~~~~~~~~~h~~~V~~-----l~~sp~g~~las~~--d~--~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 89 (488)
.+|..++..+ ..+..|...... .+|||||++|++++ ++ .|.+||+.+++... ...++...+..+.|+
T Consensus 14 ~~~~~~g~~~-~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~---lt~~~~~~~~~~~~s 89 (388)
T 3pe7_A 14 YQDASTGAQV-TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ---LTEGRGDNTFGGFLS 89 (388)
T ss_dssp EECTTTCCEE-EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE---CCCSSCBCSSSCEEC
T ss_pred EecCCCCcce-EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE---eeeCCCCCccceEEc
Confidence 4566666644 557777766666 89999999999887 45 48888988755332 234455556678899
Q ss_pred cCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccce
Q psy14511 90 PWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT 169 (488)
Q Consensus 90 ~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (488)
||++.|+++.. ++.+++||+.+++.......+
T Consensus 90 pdg~~l~~~~~---~~~l~~~d~~~g~~~~~~~~~--------------------------------------------- 121 (388)
T 3pe7_A 90 PDDDALFYVKD---GRNLMRVDLATLEENVVYQVP--------------------------------------------- 121 (388)
T ss_dssp TTSSEEEEEET---TTEEEEEETTTCCEEEEEECC---------------------------------------------
T ss_pred CCCCEEEEEeC---CCeEEEEECCCCcceeeeech---------------------------------------------
Confidence 99999888886 889999999887643322211
Q ss_pred eeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceE--EE
Q psy14511 170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYIS--CV 247 (488)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~--~~ 247 (488)
...+. ..
T Consensus 122 -----------------------------------------------------------------------~~~~~~~~~ 130 (388)
T 3pe7_A 122 -----------------------------------------------------------------------AEWVGYGTW 130 (388)
T ss_dssp -----------------------------------------------------------------------TTEEEEEEE
T ss_pred -----------------------------------------------------------------------hhcccccce
Confidence 01111 11
Q ss_pred EEcCCCCeEEEE---------------------eCCCCcEEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecC
Q psy14511 248 AWKPRTTDLAVT---------------------NTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIG 303 (488)
Q Consensus 248 ~~~~~~~~l~~~---------------------~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d 303 (488)
.++|+++.++.. ...+..|.+||+.+++.. .+..+...+..+.| +++.|+....+
T Consensus 131 ~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~ 209 (388)
T 3pe7_A 131 VANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEG 209 (388)
T ss_dssp EECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECS
T ss_pred eECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEec
Confidence 123444433321 034578999999887544 33345556666666 56777776653
Q ss_pred ------CeEEEEECcCCCccceeeecCC--ccEEEEEEccCCcEEEEEe-c-C----eEEEEECCCCCCCcccc--e---
Q psy14511 304 ------GNILHYDVRTHSDYPTAITREG--DVVCGLKWSPNGRYLASGS-N-N----TVKIWDFRQLDAKRPLG--L--- 364 (488)
Q Consensus 304 ------g~i~i~d~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~-d-~----~i~iwd~~~~~~~~~~~--~--- 364 (488)
..|.++|..... ...+..+. ..+..++|+|||+.|+..+ + + .|++||+.+++...... .
T Consensus 210 ~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 287 (388)
T 3pe7_A 210 PHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH 287 (388)
T ss_dssp CTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE
T ss_pred CCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee
Confidence 378888876532 33344443 3578899999999887655 2 2 39999999875422111 1
Q ss_pred ----e-eeeecCCCCEEEEEc-------cCCCCeEEEEeCCCcceeEEEeeccc-----------cEEEEEEcCCCCEEE
Q psy14511 365 ----I-VPKLKREGRELVTSH-------GKQDCSLKMWEYPRLHLIEELKIHQE-----------RILSAVLSPDQTCVA 421 (488)
Q Consensus 365 ----~-~~~~~~~~~~l~~~~-------g~~~~~i~i~d~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~ 421 (488)
. ...|+|||+.++... ...+..|++||+.+++. ..+..|.. .+..++|+|||+.|+
T Consensus 288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~ 366 (388)
T 3pe7_A 288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQIL 366 (388)
T ss_dssp EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEE
Confidence 0 116999999988642 14567899999998765 45555655 578899999999888
Q ss_pred EEe-CCCcEEEEecC
Q psy14511 422 AAS-ADETISIWNCF 435 (488)
Q Consensus 422 t~~-~dg~v~iw~~~ 435 (488)
..+ .+|...+|.+.
T Consensus 367 ~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 367 FTSDVHGKPALYLAT 381 (388)
T ss_dssp EEECTTSSCEEEEEE
T ss_pred EEecCCCceeEEEEE
Confidence 766 46766676654
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=9.4e-21 Score=183.28 Aligned_cols=258 Identities=10% Similarity=0.058 Sum_probs=175.9
Q ss_pred ccCCceEEEeec-CCeEEEEEcccCcccceeecccC-ceEEEEEEccCCcEEEEec----CCeEEEEeccc--cCcCCCc
Q psy14511 2 CWNGNLLSCGTI-GGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGS----NNTVKIWDFRQ--LDAKRPQ 73 (488)
Q Consensus 2 ~~dg~~la~g~~-dg~i~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~g~~las~~----d~~i~vwd~~~--~~~~~~~ 73 (488)
+.||++||+++. ||++.||++.+++ . ..+..|. ..+..++|||| +++++++ +....+|.+.. ......+
T Consensus 30 ~~DG~~la~~s~~~g~~~lw~~~~g~-~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l 106 (582)
T 3o4h_A 30 VVDGDKLLVVGFSEGSVNAYLYDGGE-T-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRL 106 (582)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETTE-E-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEEC
T ss_pred CCCCCeEEEEEccCCceeEEEEcCCC-c-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccc
Confidence 459999998876 9999999986655 3 3455555 68999999999 7777654 35566665543 2212222
Q ss_pred ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511 74 VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153 (488)
Q Consensus 74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (488)
... ..+...+|+||++.++.++.. ++.+.+||+.+++......... ....
T Consensus 107 ~~~----~~~~~~~~s~dg~~~~~~s~~--~~~~~l~d~~~g~~~~l~~~~~---~~~~--------------------- 156 (582)
T 3o4h_A 107 EAV----KPMRILSGVDTGEAVVFTGAT--EDRVALYALDGGGLRELARLPG---FGFV--------------------- 156 (582)
T ss_dssp TTS----CSBEEEEEEECSSCEEEEEEC--SSCEEEEEEETTEEEEEEEESS---CEEE---------------------
T ss_pred cCC----CCceeeeeCCCCCeEEEEecC--CCCceEEEccCCcEEEeecCCC---ceEE---------------------
Confidence 211 233466899998765444332 5566699998887544332221 1111
Q ss_pred cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECC----CeEEEEECCCCc
Q psy14511 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALD----TSVYTWNTKTNK 229 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~v~iw~~~~~~ 229 (488)
++.++..++.++.+ +.|++||+.+++
T Consensus 157 --------------------------------------------------~spDG~~la~~~~~~~~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 157 --------------------------------------------------SDIRGDLIAGLGFFGGGRVSLFTSNLSSGG 186 (582)
T ss_dssp --------------------------------------------------EEEETTEEEEEEEEETTEEEEEEEETTTCC
T ss_pred --------------------------------------------------ECCCCCEEEEEEEcCCCCeEEEEEcCCCCC
Confidence 11122344445544 679999999888
Q ss_pred eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcceeeeeeccccccEEEEE--------e--cCCEE
Q psy14511 230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQKLRTHMHQVIAMC--------W--NGNLL 297 (488)
Q Consensus 230 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~v~~~~--------~--~~~~l 297 (488)
...+. . +...+..++|+|||+.|+++ ..++ .|++||+.+++.. .+..|...+..+. | ||.++
T Consensus 187 ~~~l~---~-~~~~~~~~~~SpDG~~l~~~-~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 260 (582)
T 3o4h_A 187 LRVFD---S-GEGSFSSASISPGMKVTAGL-ETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLA 260 (582)
T ss_dssp CEEEC---C-SSCEEEEEEECTTSCEEEEE-ECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEE
T ss_pred ceEee---c-CCCccccceECCCCCEEEEc-cCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEE
Confidence 66442 2 66788999999999999966 7888 8999999988777 6666666555444 6 78889
Q ss_pred EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c---CeEEEEECCC
Q psy14511 298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---NTVKIWDFRQ 355 (488)
Q Consensus 298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d---~~i~iwd~~~ 355 (488)
++++.++.+++|++ ++ ... .....+.+++|+ +++++++++ + ..+.+||...
T Consensus 261 ~~~~~~g~~~l~~~--g~-~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 261 VVARREGRSAVFID--GE-RVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEETTEEEEEET--TE-EEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEEcCCcEEEEEE--CC-eec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 99999999999999 32 222 334678899999 999988876 4 4566776653
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=2.2e-20 Score=171.34 Aligned_cols=218 Identities=11% Similarity=0.006 Sum_probs=149.3
Q ss_pred EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe----cCCEEEEe--------------------
Q psy14511 245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW----NGNLLSCG-------------------- 300 (488)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~-------------------- 300 (488)
..++|+|+++.|+++ ..++.|++||+.+++.......+...+....+ +++.++..
T Consensus 84 ~~~~~spdg~~l~~~-~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 84 FGGFLSPDDDALFYV-KDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFY 162 (388)
T ss_dssp SSCEECTTSSEEEEE-ETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred cceEEcCCCCEEEEE-eCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhh
Confidence 346799999999998 77889999999988776666555554433332 67777642
Q ss_pred --ecCCeEEEEECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEec-C------eEEEEECCCCCCCcccc------e
Q psy14511 301 --TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGSN-N------TVKIWDFRQLDAKRPLG------L 364 (488)
Q Consensus 301 --~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~d-~------~i~iwd~~~~~~~~~~~------~ 364 (488)
..+..|++||+.+++ ...+..+...+..++|+| ||+.|+...+ + .|.++|....+...... .
T Consensus 163 ~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 240 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESC 240 (388)
T ss_dssp GGCCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEE
T ss_pred ccCCcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCccc
Confidence 234679999998763 344555666789999999 9999988763 2 78888876554322221 1
Q ss_pred eeeeecCCCCEEEEEccCCC---CeEEEEeCCCccee--EEEeecccc---EEEEEEcCCCCEEEEE---------eCCC
Q psy14511 365 IVPKLKREGRELVTSHGKQD---CSLKMWEYPRLHLI--EELKIHQER---ILSAVLSPDQTCVAAA---------SADE 427 (488)
Q Consensus 365 ~~~~~~~~~~~l~~~~g~~~---~~i~i~d~~~~~~~--~~~~~~~~~---v~~~~~s~~~~~l~t~---------~~dg 427 (488)
....|+|||+.|+..+...+ ..|++||+.+++.. ..+.++... ...++|+|||+.|+.. ..+.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 12389999998876533222 24999999988743 333331111 1123799999988864 4567
Q ss_pred cEEEEecCCCCccccccccC-----------CcceEEeecCCCceEEEE
Q psy14511 428 TISIWNCFPRDKKRKARQVG-----------SGSSLEFAILKQPVSLTA 465 (488)
Q Consensus 428 ~v~iw~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~~~~~~ 465 (488)
.|++||+.+++...+..+.. .+.+++|+|||+.+.+..
T Consensus 321 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 321 FLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp EEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred EEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEe
Confidence 89999999988766655555 578899999999886543
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=1.9e-19 Score=163.26 Aligned_cols=160 Identities=14% Similarity=0.127 Sum_probs=107.3
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cceee--eeec--cccccEEEEEe--cCCEEEEeec-CCeEEEEEC
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EERLI--QKLR--THMHQVIAMCW--NGNLLSCGTI-GGNILHYDV 311 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~~~--~~~~--~~~~~v~~~~~--~~~~l~~~~~-dg~i~i~d~ 311 (488)
+...+.+++|+|+|++++++...++.|++|++. +++.. ..+. .+...+..++| +|+++++++. ++.+.+|++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 345688999999999988874457899999998 66542 2333 23556788888 7888877765 689999987
Q ss_pred cC--CCcc--cee---ee----cCCc------cEEEEE-EccCCcEEEEEe-c-C-----eEEEEECCCCCCCcccceee
Q psy14511 312 RT--HSDY--PTA---IT----REGD------VVCGLK-WSPNGRYLASGS-N-N-----TVKIWDFRQLDAKRPLGLIV 366 (488)
Q Consensus 312 ~~--~~~~--~~~---~~----~~~~------~i~~~~-~s~~~~~l~~~~-d-~-----~i~iwd~~~~~~~~~~~~~~ 366 (488)
.. ++.. ... +. ++.. .+..++ |+|||++|++++ + + .|.+|++..
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~----------- 291 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD----------- 291 (365)
T ss_dssp CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-----------
T ss_pred eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-----------
Confidence 53 3211 011 11 1122 478899 999999887665 2 2 566665531
Q ss_pred eeecCCCCEEEEEccCCCCeEEEEeCCCcceeE---EEeeccccEEEEEEcC---CCCEEEEEeCC-CcEEEEecCCC
Q psy14511 367 PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE---ELKIHQERILSAVLSP---DQTCVAAASAD-ETISIWNCFPR 437 (488)
Q Consensus 367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~---~~~~~~~~v~~~~~s~---~~~~l~t~~~d-g~v~iw~~~~~ 437 (488)
+++... ....+...+..++|+| ||++|++++.+ +.|.+|+++..
T Consensus 292 ---------------------------~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 292 ---------------------------CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ---------------------------TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ---------------------------CCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 232221 1222444566789999 89999999865 89999999875
No 162
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.1e-19 Score=167.86 Aligned_cols=224 Identities=14% Similarity=0.134 Sum_probs=156.4
Q ss_pred CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcC-------CCcc-----ccccccc
Q psy14511 15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK-------RPQV-----NNQCHLS 81 (488)
Q Consensus 15 g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~-------~~~~-----~~~~h~~ 81 (488)
+.+++|+.... .+...++.+++++++.+|++++ |+ ++||+....... ..+. ....|..
T Consensus 23 ~~vri~~~~~~--------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPEE--------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF 93 (434)
T ss_dssp CEEECSCCCSS--------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred eeEEecCCccc--------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence 56777764311 1233578999999999999998 65 999886532110 0000 0122556
Q ss_pred ceeEEEEecCCCeEEe---eeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511 82 AVKAIAWCPWEPTLLA---TGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV 158 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~---~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (488)
.|.+++|+|++++|++ +++. |+.|++||+.++... ....
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~--d~~v~iwd~~~~~~~-----~~~~------------------------------- 135 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEY--GSIIAFFDVRTFSNE-----AKQQ------------------------------- 135 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTT--EEEEEEEEHHHHHCT-----TCSS-------------------------------
T ss_pred cccEEEEcCCCCEEEEEEeccCC--CceEEEEEccccccC-----CcCC-------------------------------
Confidence 7999999999998874 4543 999999998654100 0000
Q ss_pred eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511 159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT 238 (488)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~ 238 (488)
.........+.+
T Consensus 136 --------------------------------------------------------------------~~~~~~~~~~~~ 147 (434)
T 2oit_A 136 --------------------------------------------------------------------KRPFAYHKLLKD 147 (434)
T ss_dssp --------------------------------------------------------------------CCCSEEEECCCS
T ss_pred --------------------------------------------------------------------cceeeeeeccCC
Confidence 000000111222
Q ss_pred CCCCceEEEEEcCC-CCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCC
Q psy14511 239 YDNAYISCVAWKPR-TTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 239 ~~~~~i~~~~~~~~-~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~ 315 (488)
|...|.+++|+|+ +..++++ +.||.|++||++++..+....+|...+.+++| +|++|++|+.||.|++||.+ +.
T Consensus 148 -h~~~V~~v~~~p~~~~~las~-s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 148 -AGGMVIDMKWNPTVPSMVAVC-LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp -GGGSEEEEEECSSCTTEEEEE-ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred -CCCceEEEEECCCCCCEEEEE-ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 7889999999998 6778878 99999999999998777677778999999999 78999999999999999998 22
Q ss_pred ccceeeec-------CCccEEEEEEccCCcEEEEEe--cC------eEEEEECCCCC
Q psy14511 316 DYPTAITR-------EGDVVCGLKWSPNGRYLASGS--NN------TVKIWDFRQLD 357 (488)
Q Consensus 316 ~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~--d~------~i~iwd~~~~~ 357 (488)
....+.. |...+.+++|++++.++++.+ +| .+++|++.+.+
T Consensus 225 -~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 225 -EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp -EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred -ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 2233322 334799999999998887654 22 38999998653
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=6.1e-19 Score=175.08 Aligned_cols=307 Identities=12% Similarity=0.145 Sum_probs=192.5
Q ss_pred eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc-----ceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511 38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS-----AVKAIAWCPWEPTLLATGGGICDQTVRLWNS 112 (488)
Q Consensus 38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~ 112 (488)
....++|+|||++|+++ |+.|++||+.+++... .+.+|.. ....++|||||++|++... ++.+ |..
T Consensus 18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~---~~~~--~r~ 88 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSV---FLENSTFDEFGHSINDYSISPDGQFILLEYN---YVKQ--WRH 88 (740)
T ss_dssp CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEE---EECTTTTTTCCSCCCEEEECTTSSEEEEEEE---EEEC--SSS
T ss_pred cccccEECCCCcEEEEc-CCcEEEEECCCCceEE---EEechhhhhhcccccceEECCCCCEEEEEEC---Ceee--EEE
Confidence 35678999999999997 9999999999866432 2334432 2345899999998877764 4322 110
Q ss_pred CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511 113 MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA 192 (488)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (488)
.
T Consensus 89 ~------------------------------------------------------------------------------- 89 (740)
T 4a5s_A 89 S------------------------------------------------------------------------------- 89 (740)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511 193 PSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ 272 (488)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~ 272 (488)
..+.+.+||+.+++... +.. +...+..++|||||+.|+.+ .++.|++|+..
T Consensus 90 -----------------------~~~~~~~~d~~~~~~~~---l~~-~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~ 140 (740)
T 4a5s_A 90 -----------------------YTASYDIYDLNKRQLIT---EER-IPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEP 140 (740)
T ss_dssp -----------------------EEEEEEEEETTTTEECC---SSC-CCTTEEEEEECSSTTCEEEE--ETTEEEEESST
T ss_pred -----------------------cceEEEEEECCCCcEEE---ccc-CCCcceeeEECCCCCEEEEE--ECCeEEEEECC
Confidence 01234455555544322 222 55678899999999999888 56899999998
Q ss_pred cceeeeee-ccccccE-----------------EEEEe--cCCEEEEeecCC----------------------------
Q psy14511 273 EERLIQKL-RTHMHQV-----------------IAMCW--NGNLLSCGTIGG---------------------------- 304 (488)
Q Consensus 273 ~~~~~~~~-~~~~~~v-----------------~~~~~--~~~~l~~~~~dg---------------------------- 304 (488)
+++..+.. .++...+ .++.| ||+.|+..+.|.
T Consensus 141 ~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~ 220 (740)
T 4a5s_A 141 NLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPK 220 (740)
T ss_dssp TSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCB
T ss_pred CCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCC
Confidence 77654322 2222222 23556 888888775321
Q ss_pred --------eEEEEECcC---CCc-cceeee------cCCccEEEEEEccCCcEEEEEec-----CeEEEEECCCCC----
Q psy14511 305 --------NILHYDVRT---HSD-YPTAIT------REGDVVCGLKWSPNGRYLASGSN-----NTVKIWDFRQLD---- 357 (488)
Q Consensus 305 --------~i~i~d~~~---~~~-~~~~~~------~~~~~i~~~~~s~~~~~l~~~~d-----~~i~iwd~~~~~---- 357 (488)
.|++||+.+ +.. ....+. .+...+..++|+|||+.++.... ..|.+||+.+++
T Consensus 221 ~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~ 300 (740)
T 4a5s_A 221 AGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWN 300 (740)
T ss_dssp TTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEE
T ss_pred CcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccc
Confidence 588899887 521 122232 37778999999999997776542 479999998875
Q ss_pred CC--ccc-----c-------eeeeeecCCCCEEE-EEccCCC--CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE
Q psy14511 358 AK--RPL-----G-------LIVPKLKREGRELV-TSHGKQD--CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV 420 (488)
Q Consensus 358 ~~--~~~-----~-------~~~~~~~~~~~~l~-~~~g~~~--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 420 (488)
.. ..+ . .....|+|||+.++ .. ...+ ..|++||+.+++.. .+....-.+..+.. +|++.|
T Consensus 301 ~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~-s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i 377 (740)
T 4a5s_A 301 CLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII-SNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYL 377 (740)
T ss_dssp ECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEE-ECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEE
T ss_pred eeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEE-EcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEE
Confidence 11 111 0 11348999999887 43 2333 46888898876654 34434455665542 456666
Q ss_pred EEEeCC-----C--cEEEEecCCCCcc-ccc----cccCCcceEEeecCCCceEEE
Q psy14511 421 AAASAD-----E--TISIWNCFPRDKK-RKA----RQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 421 ~t~~~d-----g--~v~iw~~~~~~~~-~~~----~~~~~v~~~~~s~~~~~~~~~ 464 (488)
+..+.. + .|+..++..++.. .+. ..........|||+++.+.+.
T Consensus 378 ~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~ 433 (740)
T 4a5s_A 378 YYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR 433 (740)
T ss_dssp EEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred EEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence 554433 3 4555555544332 121 123567889999999977554
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=2.9e-18 Score=155.53 Aligned_cols=239 Identities=13% Similarity=0.142 Sum_probs=156.8
Q ss_pred ccCCceEEEeecC----CeEEEEEcccC-cccc--eeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCC
Q psy14511 2 CWNGNLLSCGTIG----GNILHYDVRTH-SDYP--TAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRP 72 (488)
Q Consensus 2 ~~dg~~la~g~~d----g~i~iwd~~~~-~~~~--~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~ 72 (488)
+.||++|++++.+ +.|.+|++... ..+. .....+......+++ ++++|++++ ++.|.+|++........
T Consensus 58 spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~ 135 (361)
T 3scy_A 58 SADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLP 135 (361)
T ss_dssp CTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCS
T ss_pred CCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcc
Confidence 3489999988875 79999998764 2121 122335556777888 888887775 89999999975332222
Q ss_pred cccc-----------cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee------eeeeecCCCccccccccc
Q psy14511 73 QVNN-----------QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE------KCHVKTDSQQANDETISY 135 (488)
Q Consensus 73 ~~~~-----------~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~------~~~~~~~~~~~~~~~~~~ 135 (488)
+... ..+...+.+++|+|||+++++++.. ++.+.+|++..... +... .
T Consensus 136 ~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~-~------------ 200 (361)
T 3scy_A 136 ASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG--TDQIHKFNINPNANADNKEKFLTK-G------------ 200 (361)
T ss_dssp CSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTCCTTTCCCCEEE-E------------
T ss_pred cceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC--CCEEEEEEEcCCCCcccccceeec-c------------
Confidence 2111 1123346889999999988887764 88999999864331 0000 0
Q ss_pred cccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE
Q psy14511 136 REQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215 (488)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (488)
T Consensus 201 -------------------------------------------------------------------------------- 200 (361)
T 3scy_A 201 -------------------------------------------------------------------------------- 200 (361)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--eeee---ccccccEEEE
Q psy14511 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--IQKL---RTHMHQVIAM 290 (488)
Q Consensus 216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--~~~~---~~~~~~v~~~ 290 (488)
........ ....+..++|+|+|+++++++..++.|.+|++.+++. +..+ ..+......+
T Consensus 201 --------------~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i 264 (361)
T 3scy_A 201 --------------TPEAFKVA--PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDI 264 (361)
T ss_dssp --------------EEEEEECC--TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEE
T ss_pred --------------cccceecC--CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccE
Confidence 00011111 3345678999999999888845799999999986643 2222 2233456778
Q ss_pred Ee--cCCEEEEeecC--CeEEEEECcC--CC-ccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECC
Q psy14511 291 CW--NGNLLSCGTIG--GNILHYDVRT--HS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFR 354 (488)
Q Consensus 291 ~~--~~~~l~~~~~d--g~i~i~d~~~--~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~ 354 (488)
+| ++++|+++..+ +.|.+|++.. +. .....+.. ...+..++|+|+|++|++++ + +.+.+|++.
T Consensus 265 ~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 265 HLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 88 78888776654 8999999962 22 12222333 44577899999999888886 3 777776554
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=1.6e-20 Score=186.49 Aligned_cols=267 Identities=13% Similarity=0.119 Sum_probs=171.6
Q ss_pred EEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc---ceeEEEEecCCCeEEeeeCC------cccceEEEEe
Q psy14511 41 GLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS---AVKAIAWCPWEPTLLATGGG------ICDQTVRLWN 111 (488)
Q Consensus 41 ~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~l~~~~~~------~~d~~i~vwd 111 (488)
.++|+|||++++++.|+.|++||+.+++... .+.+|.. .+.+++|||||++|+++... +.++.|++||
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYT---ILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEE---EECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEE---EEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 6899999988887779999999998865332 2333433 48999999999988776531 0146777777
Q ss_pred cCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeec
Q psy14511 112 SMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE 191 (488)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (488)
+.+++.+.
T Consensus 97 ~~~g~~~~------------------------------------------------------------------------ 104 (719)
T 1z68_A 97 LSNGEFVR------------------------------------------------------------------------ 104 (719)
T ss_dssp TTTTEECC------------------------------------------------------------------------
T ss_pred CCCCcccc------------------------------------------------------------------------
Confidence 76654210
Q ss_pred CCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC
Q psy14511 192 APSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE 271 (488)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~ 271 (488)
... ....+..++|+|||+.|+++ .++.|++|++
T Consensus 105 -----------------------------------------~~~----l~~~~~~~~~SPDG~~la~~--~~~~i~~~~~ 137 (719)
T 1z68_A 105 -----------------------------------------GNE----LPRPIQYLCWSPVGSKLAYV--YQNNIYLKQR 137 (719)
T ss_dssp -----------------------------------------SSC----CCSSBCCEEECSSTTCEEEE--ETTEEEEESS
T ss_pred -----------------------------------------cee----cCcccccceECCCCCEEEEE--ECCeEEEEeC
Confidence 000 11246778999999999988 4789999999
Q ss_pred Ccceeeeee-ccccccE-----------------EEEEe--cCCEEEEeecCC---------------------------
Q psy14511 272 QEERLIQKL-RTHMHQV-----------------IAMCW--NGNLLSCGTIGG--------------------------- 304 (488)
Q Consensus 272 ~~~~~~~~~-~~~~~~v-----------------~~~~~--~~~~l~~~~~dg--------------------------- 304 (488)
.+++..... .++...+ .+++| ||+.|++++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 887665433 2232222 36777 899999887652
Q ss_pred -------eEEEEECcCCCcc--c-----eeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeec
Q psy14511 305 -------NILHYDVRTHSDY--P-----TAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLK 370 (488)
Q Consensus 305 -------~i~i~d~~~~~~~--~-----~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 370 (488)
.|++||+.++... . ..+..|...+..++|+||++++++..+.
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~------------------------ 273 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKR------------------------ 273 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEES------------------------
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEecc------------------------
Confidence 7888998765321 0 1133577778899999998776664320
Q ss_pred CCCCEEEEEccCCCCeEEEEe----CCCcceeEEE----eeccccEE-----EEEEcCCCCEEEE--EeCCC--cEEEEe
Q psy14511 371 REGRELVTSHGKQDCSLKMWE----YPRLHLIEEL----KIHQERIL-----SAVLSPDQTCVAA--ASADE--TISIWN 433 (488)
Q Consensus 371 ~~~~~l~~~~g~~~~~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~s~~~~~l~t--~~~dg--~v~iw~ 433 (488)
+.....|.+|| +.+++....+ .+|...+. .++|+|||+.|+. ...+| .|.+|+
T Consensus 274 ----------~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~ 343 (719)
T 1z68_A 274 ----------VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIK 343 (719)
T ss_dssp ----------STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEES
T ss_pred ----------ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEE
Confidence 00112234444 3444333333 34555565 7899999996654 44555 577778
Q ss_pred cCCCCccccccccCCcceEEeecCCCceEEE
Q psy14511 434 CFPRDKKRKARQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 434 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~ 464 (488)
+.+++...+..+...+..+.++ +++.+.+.
T Consensus 344 ~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~ 373 (719)
T 1z68_A 344 DTVENAIQITSGKWEAINIFRV-TQDSLFYS 373 (719)
T ss_dssp SCSTTCEECSCSSSCEEEEEEE-CSSEEEEE
T ss_pred CCCCceEecccCceEEEEEEEE-eCCEEEEE
Confidence 8777655555555556677777 66666443
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=1.1e-18 Score=157.34 Aligned_cols=295 Identities=8% Similarity=0.030 Sum_probs=189.7
Q ss_pred cCCceEEEee------cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEecc
Q psy14511 3 WNGNLLSCGT------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFR 65 (488)
Q Consensus 3 ~dg~~la~g~------~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~ 65 (488)
++++++.+.. .|+.|.+||..+++.+ ..+..+..+ .++|+|||++|+++. ++.|.+||..
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~-~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFL-GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEE-EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEE-EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 3677766543 4779999999988754 445555555 899999999988874 5679999998
Q ss_pred ccCcCCCcccccc---cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeee-eecCCCccccccccccccccc
Q psy14511 66 QLDAKRPQVNNQC---HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH-VKTDSQQANDETISYREQKKR 141 (488)
Q Consensus 66 ~~~~~~~~~~~~~---h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 141 (488)
+.+....+..... +......++|+|||++|+++... .+++|.+||+.+++.+.. +....... ..+.+
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~-~~~~v~v~d~~~~~~~~~~i~~~~~~~--v~~~p------ 160 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS-PATSIGIVDVAKGDYVEDVTAAAGCWS--VIPQP------ 160 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-SSEEEEEEETTTTEEEEEEGGGTTEEE--EEECT------
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-CCCeEEEEECCCCcEEEEEecCCCcce--eEEcC------
Confidence 7554333322111 22456789999999998887641 168999999999877655 33220000 00000
Q ss_pred eeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511 142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY 221 (488)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 221 (488)
.....+++.+.||.+.
T Consensus 161 ----------------------------------------------------------------~~~~~~~~~~~dg~~~ 176 (361)
T 2oiz_A 161 ----------------------------------------------------------------NRPRSFMTICGDGGLL 176 (361)
T ss_dssp ----------------------------------------------------------------TSSSEEEEEETTSSEE
T ss_pred ----------------------------------------------------------------CCCeeEEEECCCCcEE
Confidence 0013467777899999
Q ss_pred EEECCC-CceEEEEe----cCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--eeeecc------------
Q psy14511 222 TWNTKT-NKTQLLVE----YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--IQKLRT------------ 282 (488)
Q Consensus 222 iw~~~~-~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--~~~~~~------------ 282 (488)
+|+... ++...... +.. ...++ .+.+++++..++.. +.++.+.++|+..... ...+..
T Consensus 177 ~v~~~~~g~~~~~~~~~~~~~~-~~~~~-~~~~~~~g~~~~~~-~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p 253 (361)
T 2oiz_A 177 TINLGEDGKVASQSRSKQMFSV-KDDPI-FIAPALDKDKAHFV-SYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVP 253 (361)
T ss_dssp EEEECTTSSEEEEEECCCCSCT-TTSCB-CSCCEECSSEEEEE-BTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEE
T ss_pred EEEECCCCcEeeeccccceEcC-CCCce-EEEecccCCEEEEE-eCCCeEEEEEecCCCceecccccccCcccccccccc
Confidence 998865 44432211 111 12222 33446777777777 7889999999865421 111110
Q ss_pred ccccEEEEEecCCEEEEeec-----------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511 283 HMHQVIAMCWNGNLLSCGTI-----------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIW 351 (488)
Q Consensus 283 ~~~~v~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iw 351 (488)
......++..+++.++++.. .+.|.+||+.+. +.+..+..+. +.+++|+|||++|+++++
T Consensus 254 ~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~~--p~~ia~spdg~~l~v~n~------ 324 (361)
T 2oiz_A 254 GGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGRD--ALSMTIDQQRNLMLTLDG------ 324 (361)
T ss_dssp CCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECTT--CCEEEEETTTTEEEEECS------
T ss_pred CCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecCC--eeEEEECCCCCEEEEeCC------
Confidence 00111344446676666543 348999999886 4566666665 888999999998876632
Q ss_pred ECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCc--ceeEEEeeccccEEEEEEcCCCC
Q psy14511 352 DFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRL--HLIEELKIHQERILSAVLSPDQT 418 (488)
Q Consensus 352 d~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~ 418 (488)
+.|.+||..++ +.+.++..+......++++|||+
T Consensus 325 ---------------------------------~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 325 ---------------------------------GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ---------------------------------SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ---------------------------------CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 66777777777 77777766667788899999986
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=1.3e-18 Score=157.19 Aligned_cols=262 Identities=9% Similarity=-0.020 Sum_probs=172.3
Q ss_pred cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-----
Q psy14511 210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM----- 284 (488)
Q Consensus 210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~----- 284 (488)
.+++++.++.|++||..+++....+... ....+..++|+|+++.+++++..++.|.+||+.+++....+....
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~ 90 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMP--DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEV 90 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECS--SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecC--CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccc
Confidence 4556679999999999999887776643 222577899999999877665788999999999988877665322
Q ss_pred -ccEEEEEe--cCCEEEEeecC------------CeEEEEECcCCCc--cceeeecCCccEEEEEEccCCcEEEEEecCe
Q psy14511 285 -HQVIAMCW--NGNLLSCGTIG------------GNILHYDVRTHSD--YPTAITREGDVVCGLKWSPNGRYLASGSNNT 347 (488)
Q Consensus 285 -~~v~~~~~--~~~~l~~~~~d------------g~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~ 347 (488)
..+..+++ +++.+++++.+ +.|.+||+.+++. ...... +...+.+++|+|+|+ ++++ ++.
T Consensus 91 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~-~~~ 167 (349)
T 1jmx_B 91 GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVA-GPD 167 (349)
T ss_dssp EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEE-SSS
T ss_pred cccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEc-cCc
Confidence 22556666 78899988865 8999999987432 222233 333578899999999 5544 445
Q ss_pred EEEEECCCCCCCcccceee-----------------------------eeecCCCCEEEEEccCCCCeEEEEeCCCccee
Q psy14511 348 VKIWDFRQLDAKRPLGLIV-----------------------------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLI 398 (488)
Q Consensus 348 i~iwd~~~~~~~~~~~~~~-----------------------------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~ 398 (488)
|.+||+.+++....+.... ..+++++...... ......+..+|..+++..
T Consensus 168 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 246 (349)
T 1jmx_B 168 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT-ADLLYGYLSVDLKTGKTH 246 (349)
T ss_dssp EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC-CEEEEEEEEEETTTCCEE
T ss_pred EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc-cccceeEEEEeccCCcEE
Confidence 9999998775433221110 0122221100000 000011222455554421
Q ss_pred -EEEeeccccEEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEEeeeccccccee
Q psy14511 399 -EELKIHQERILSAVLSP-DQTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQ 476 (488)
Q Consensus 399 -~~~~~~~~~v~~~~~s~-~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~ 476 (488)
..+..+...+..++|+| |+++++++ ++.|.+||+.+++..........+.+++|+|+++.+... ..+..
T Consensus 247 ~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-------~~~~~ 317 (349)
T 1jmx_B 247 TQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG-------GTFND 317 (349)
T ss_dssp EEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEE-------SBSSE
T ss_pred ecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEe-------cCCCe
Confidence 22334556789999999 99999988 889999999998877665556678899999999887442 22345
Q ss_pred eEEEEeeccc
Q psy14511 477 HAIAYTVFGE 486 (488)
Q Consensus 477 ~~i~~~~~g~ 486 (488)
+.++..++++
T Consensus 318 v~v~d~~~~~ 327 (349)
T 1jmx_B 318 LAVFNPDTLE 327 (349)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeccccc
Confidence 5556555554
No 168
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.83 E-value=1.4e-16 Score=150.61 Aligned_cols=327 Identities=13% Similarity=0.079 Sum_probs=217.2
Q ss_pred CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEecc--ccCcCCCccccccccc
Q psy14511 5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR--QLDAKRPQVNNQCHLS 81 (488)
Q Consensus 5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~--~~~~~~~~~~~~~h~~ 81 (488)
+.++++...+++|.++|..+++.+.. +.. ...+..+.|||||++|++++ |+.|.+||+. +.+ .+..+.. ..
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~-i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~---~v~~i~~-G~ 240 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTV-LDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT---TVAEIKI-GS 240 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEE-EEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC---EEEEEEC-CS
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEE-EeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc---EeEEEec-CC
Confidence 45666777899999999999885543 332 23467899999999999888 8999999995 433 2223322 23
Q ss_pred ceeEEEEe----cCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccc
Q psy14511 82 AVKAIAWC----PWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKK 157 (488)
Q Consensus 82 ~v~~l~~~----~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (488)
....++|+ |||++++++... ++++.++|..+.+.+..+...........+.+.+
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~--~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~-------------------- 298 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP-------------------- 298 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEE--TTEEEEEETTTCCEEEEEECCEECTTTCCEESCC--------------------
T ss_pred CCceeEEccccCCCCCEEEEEEcc--CCeEEEEECCCCcEEEEEeccccccccccccCCC--------------------
Confidence 46789999 699999988873 8999999999988877665431111000000000
Q ss_pred eeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCc-EEEEECCCeEEEEECCCCceEEEE
Q psy14511 158 VLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHD-TLAVALDTSVYTWNTKTNKTQLLV 234 (488)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~d~~v~iw~~~~~~~~~~~ 234 (488)
.+..+..+ ... ++....+|.|.++|....+.....
T Consensus 299 ------------------------------------------rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~ 336 (567)
T 1qks_A 299 ------------------------------------------RVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT 336 (567)
T ss_dssp ------------------------------------------CEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE
T ss_pred ------------------------------------------ceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee
Confidence 00001111 112 333347799999999876544444
Q ss_pred ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-----ccccEEEE-EecC-CEEEEee-cCCeE
Q psy14511 235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-----HMHQVIAM-CWNG-NLLSCGT-IGGNI 306 (488)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-----~~~~v~~~-~~~~-~~l~~~~-~dg~i 306 (488)
.+. .......+.|+|+++++++++..++.|.++|+.+++.+..+.. |.+.-..+ ..++ ...++.. .++.|
T Consensus 337 ~i~--~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~V 414 (567)
T 1qks_A 337 EIS--AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSV 414 (567)
T ss_dssp EEE--CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEE
T ss_pred eee--ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeE
Confidence 433 3456778999999999988867789999999999887766543 33222222 2243 4444443 46899
Q ss_pred EEEECcCCC------ccceeeecCCccEEEEEEccCCcEEEEEe--------cCeEEEEECCCC-----CCC-cccc---
Q psy14511 307 LHYDVRTHS------DYPTAITREGDVVCGLKWSPNGRYLASGS--------NNTVKIWDFRQL-----DAK-RPLG--- 363 (488)
Q Consensus 307 ~i~d~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--------d~~i~iwd~~~~-----~~~-~~~~--- 363 (488)
.++|....+ +.+..+......-..+..+|++++|.+.. .+.|.++|+.+. ... ..+.
T Consensus 415 svid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~ 494 (567)
T 1qks_A 415 ALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAE 494 (567)
T ss_dssp EEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHH
T ss_pred EEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEecccc
Confidence 999988632 23444444333334477899999998866 249999999877 211 1111
Q ss_pred ----------eeeeeecCCCCEEEEEccC---CCCeEEEEeCCCcceeEEEee
Q psy14511 364 ----------LIVPKLKREGRELVTSHGK---QDCSLKMWEYPRLHLIEELKI 403 (488)
Q Consensus 364 ----------~~~~~~~~~~~~l~~~~g~---~~~~i~i~d~~~~~~~~~~~~ 403 (488)
.....|+++|+++.++... .++.|.++|.++++++.++..
T Consensus 495 ~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 495 WAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp HHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred ccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 1122899999999886432 479999999999999888764
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=2.2e-18 Score=158.57 Aligned_cols=330 Identities=11% Similarity=0.057 Sum_probs=186.0
Q ss_pred EEEEcccCcccceeecccCc-----eEEEEEEccCCcEEEEec----CCeEEEEeccccCcCCCcccccccccceeEEEE
Q psy14511 18 LHYDVRTHSDYPTAITREGD-----VVCGLKWSPNGRYLASGS----NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAW 88 (488)
Q Consensus 18 ~iwd~~~~~~~~~~~~~h~~-----~V~~l~~sp~g~~las~~----d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 88 (488)
...|..+++.+ ..+..+.. .+..++|||||++|+... +..|.+||+.+++... + ..++......+.|
T Consensus 13 ~~~d~~~g~~~-~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l--~~~~~~~~~~~~~ 88 (396)
T 3c5m_A 13 TFVDSDTQVKV-TRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-L--TEGKGDNTFGGFI 88 (396)
T ss_dssp EEECTTTCCEE-EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-C--CCSSCBCTTTCEE
T ss_pred eeecCCCCcce-EEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-e--ecCCCCccccceE
Confidence 35577777644 34444433 377889999999988875 3478889988754322 1 1222222334789
Q ss_pred ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccc
Q psy14511 89 CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSP 168 (488)
Q Consensus 89 ~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (488)
+|||++|+++.. ++.|.+||+.+++.......+.. +.+ .+..+.+.......
T Consensus 89 spdg~~l~~~~~---~~~l~~~d~~~~~~~~~~~~~~~------~~~-------------------~g~~l~~~~~~~~~ 140 (396)
T 3c5m_A 89 STDERAFFYVKN---ELNLMKVDLETLEEQVIYTVDEE------WKG-------------------YGTWVANSDCTKLV 140 (396)
T ss_dssp CTTSSEEEEEET---TTEEEEEETTTCCEEEEEECCTT------EEE-------------------EEEEEECTTSSEEE
T ss_pred CCCCCEEEEEEc---CCcEEEEECCCCCcEEEEecccc------cCC-------------------CCCEEEeccCCccc
Confidence 999999888886 77999999988875544332211 000 01111111100000
Q ss_pred eeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEE-----ECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511 169 TQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAV-----ALDTSVYTWNTKTNKTQLLVEYPTYDN 241 (488)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~d~~v~iw~~~~~~~~~~~~~~~~~~ 241 (488)
... .....++ ...++.. ..+..|++||+.+++...+.. +.
T Consensus 141 ~~~-----------------------------~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~----~~ 187 (396)
T 3c5m_A 141 GIE-----------------------------ILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ----DT 187 (396)
T ss_dssp EEE-----------------------------EEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE----ES
T ss_pred ccc-----------------------------ccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc----CC
Confidence 000 0000111 1111111 245689999999988766553 45
Q ss_pred CceEEEEEcC-CCCeEEEEeCCC------CcEEEEECCcceeeeeeccc-cccEEEEEe--cCCEEEEeecC-----CeE
Q psy14511 242 AYISCVAWKP-RTTDLAVTNTCT------EYIDLWHEQEERLIQKLRTH-MHQVIAMCW--NGNLLSCGTIG-----GNI 306 (488)
Q Consensus 242 ~~i~~~~~~~-~~~~l~~~~~~~------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~d-----g~i 306 (488)
..+..+.|+| +++.++.. +.+ ..|.+||+..++........ ...+..+.| +++.|+..+.+ +.|
T Consensus 188 ~~~~~~~~sp~dg~~l~~~-~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFC-HEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp SCEEEEEEETTEEEEEEEE-ECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred cccccceECCCCCCEEEEE-ecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 6788999999 78877776 333 46888898765433333321 235677777 78877766544 449
Q ss_pred EEEECcCCCccceeeecCCccEEEEEEcc-CCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCC
Q psy14511 307 LHYDVRTHSDYPTAITREGDVVCGLKWSP-NGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDC 385 (488)
Q Consensus 307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 385 (488)
++||+.++.. ..+..... .. +.|+| +|+++++++...- +..... .. .. ...+.
T Consensus 267 ~~~d~~~g~~--~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p--~~~~~~-----------------~~-~~--~~~~~ 320 (396)
T 3c5m_A 267 YKANPETLEN--EEVMVMPP-CS-HLMSNFDGSLMVGDGCDAP--VDVADA-----------------DS-YN--IENDP 320 (396)
T ss_dssp EEECTTTCCE--EEEEECCS-EE-EEEECSSSSEEEEEECCC------------------------------C--CCCCC
T ss_pred EEEECCCCCe--EEeeeCCC-CC-CCccCCCCceEEEecCCcc--eeeccc-----------------cc-cc--cCCCC
Confidence 9999987542 22222222 33 88999 9998876542100 000000 00 00 12346
Q ss_pred eEEEEeCCCcceeEEEeeccc-----------cEEEEEEcCCCCEEEEEeC-CCcEEEE--ecCCCCcc
Q psy14511 386 SLKMWEYPRLHLIEELKIHQE-----------RILSAVLSPDQTCVAAASA-DETISIW--NCFPRDKK 440 (488)
Q Consensus 386 ~i~i~d~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~t~~~-dg~v~iw--~~~~~~~~ 440 (488)
.|++||+.+++. ..+..+.. .+..++|+|||+.|+.++. ++...+| ++.+++..
T Consensus 321 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 321 FLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp EEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred cEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 677788776654 33444443 2567899999999887765 4554555 44555443
No 170
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.81 E-value=2.2e-16 Score=149.31 Aligned_cols=222 Identities=9% Similarity=-0.011 Sum_probs=157.6
Q ss_pred ceEEEEEc----CCCCeEEEEeCCCCcEEEEECCcceeeeeeccc-----------cccEEEEEe--c-CCEEEEeecCC
Q psy14511 243 YISCVAWK----PRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-----------MHQVIAMCW--N-GNLLSCGTIGG 304 (488)
Q Consensus 243 ~i~~~~~~----~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-----------~~~v~~~~~--~-~~~l~~~~~dg 304 (488)
....++|+ |+|+++++++..++.+.++|..+.+.+..+... ...+..+.. + ..+++....+|
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 35688999 699999998777899999999998887776421 124566655 2 45666667789
Q ss_pred eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCCCCCcccce-e--------eeeecCCC
Q psy14511 305 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQLDAKRPLGL-I--------VPKLKREG 373 (488)
Q Consensus 305 ~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~~~~~~-~--------~~~~~~~~ 373 (488)
.|.++|....................+.|+|+|++++++. . +.|.++|+.+++....+.. . ...++|++
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~ 400 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTF 400 (567)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTT
T ss_pred eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCC
Confidence 9999998765422222223344567889999999988877 3 9999999998865443332 1 11357876
Q ss_pred CEEEEEccCCCCeEEEEeCCC-------cceeEEEeeccccEEEEEEcCCCCEEEEEeC-------CCcEEEEecCCC--
Q psy14511 374 RELVTSHGKQDCSLKMWEYPR-------LHLIEELKIHQERILSAVLSPDQTCVAAASA-------DETISIWNCFPR-- 437 (488)
Q Consensus 374 ~~l~~~~g~~~~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~-------dg~v~iw~~~~~-- 437 (488)
..++++....++.|.++|..+ .+.++++......-..+..+|++++|.+... .+.|.++|+.+.
T Consensus 401 g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 480 (567)
T 1qks_A 401 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTG 480 (567)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCC
T ss_pred CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccc
Confidence 666554344578999999987 6788888765444455788999999988663 359999999987
Q ss_pred ---Ccc--ccc--------cccCCcceEEeecCCCceEEE
Q psy14511 438 ---DKK--RKA--------RQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 438 ---~~~--~~~--------~~~~~v~~~~~s~~~~~~~~~ 464 (488)
... ... .....+..+.|+|+|+.+.++
T Consensus 481 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 481 DGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFS 520 (567)
T ss_dssp SSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEE
T ss_pred cccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEE
Confidence 211 111 123467899999999998665
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=6.9e-17 Score=146.41 Aligned_cols=252 Identities=10% Similarity=0.059 Sum_probs=162.9
Q ss_pred cEEEEECC--CeEEEEEC--CCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC-cceeeeeeccc-
Q psy14511 210 DTLAVALD--TSVYTWNT--KTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ-EERLIQKLRTH- 283 (488)
Q Consensus 210 ~~~~~~~d--~~v~iw~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~-~~~~~~~~~~~- 283 (488)
.+++++.. +.|.+|++ .+++..............+..++|+|++++|+++ +.+ .|.+|++. +++........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~-~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGA-AMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEE-EBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEE-ccc-eEEEEEECCCCCEEEeeEeec
Confidence 35566642 56877664 5666544333211033467789999999999888 555 99999987 66554332210
Q ss_pred cccEEEEEe--cCCE--EEEee-------------cCCeEEEEECcCCCccceeee----cCCccEEEEEEccCCcEEEE
Q psy14511 284 MHQVIAMCW--NGNL--LSCGT-------------IGGNILHYDVRTHSDYPTAIT----REGDVVCGLKWSPNGRYLAS 342 (488)
Q Consensus 284 ~~~v~~~~~--~~~~--l~~~~-------------~dg~i~i~d~~~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~~ 342 (488)
.+....+++ +++. ++++. .++.+.+|++.........+. .+...+.+++|+|||++|++
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 112233555 6773 44553 689999999974333322222 24567899999999998887
Q ss_pred Ee--cCeEEEEECC-CCCCCc--ccc-------eeeeeecCCCCEEEEEccCCCCeEEEEeCC--Cccee---EEEe---
Q psy14511 343 GS--NNTVKIWDFR-QLDAKR--PLG-------LIVPKLKREGRELVTSHGKQDCSLKMWEYP--RLHLI---EELK--- 402 (488)
Q Consensus 343 ~~--d~~i~iwd~~-~~~~~~--~~~-------~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~--~~~~~---~~~~--- 402 (488)
+. ++.|++||+. +++... .+. ....+|+|+|++++++ +..++.+.+|++. +++.. ..+.
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~-~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 240 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYAL-MEAGNRICEYVIDPATHMPVYTHHSFPLIP 240 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEE-ETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEE-ECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence 76 3899999998 554321 111 1112899999999875 4567899999764 56542 2222
Q ss_pred ----eccc------cEEEEE-EcCCCCEEEEEeCCC------cEEEEecC-CCCcccc---c-cccCCcceEEeec---C
Q psy14511 403 ----IHQE------RILSAV-LSPDQTCVAAASADE------TISIWNCF-PRDKKRK---A-RQVGSGSSLEFAI---L 457 (488)
Q Consensus 403 ----~~~~------~v~~~~-~s~~~~~l~t~~~dg------~v~iw~~~-~~~~~~~---~-~~~~~v~~~~~s~---~ 457 (488)
+|.. .+..++ |+|||++|++++.+. .|.+|++. +++.... . .+...+..++|+| +
T Consensus 241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcC
Confidence 1222 588999 999999988766432 89999996 5554431 2 2345678899999 7
Q ss_pred CCceEEE
Q psy14511 458 KQPVSLT 464 (488)
Q Consensus 458 ~~~~~~~ 464 (488)
++.+...
T Consensus 321 g~~l~v~ 327 (365)
T 1jof_A 321 DEWMAIT 327 (365)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8877443
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=9e-16 Score=134.14 Aligned_cols=243 Identities=14% Similarity=0.158 Sum_probs=160.7
Q ss_pred cccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCccc---ccccccceeEEEEe-cCCCeEEeeeCCcccceE
Q psy14511 33 TREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVN---NQCHLSAVKAIAWC-PWEPTLLATGGGICDQTV 107 (488)
Q Consensus 33 ~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~---~~~h~~~v~~l~~~-~~~~~l~~~~~~~~d~~i 107 (488)
.+|-....+++++|+|+++++.. ++.|.+||... +....+.. ..+|...+..+++. +++. ++++... .++.|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~-~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERS-PTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECG-GGCEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCC-CCCEE
Confidence 35566789999999999888876 89999999763 32211111 12345678899994 5664 4444420 16788
Q ss_pred EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511 108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE 187 (488)
Q Consensus 108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
.+|| .+++.+..+.
T Consensus 103 ~~~d-~~g~~~~~~~----------------------------------------------------------------- 116 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFG----------------------------------------------------------------- 116 (286)
T ss_dssp EEEC-TTSCEEEEEC-----------------------------------------------------------------
T ss_pred EEEC-CCCcEEEEec-----------------------------------------------------------------
Confidence 8888 4444321110
Q ss_pred eeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511 188 RILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267 (488)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~ 267 (488)
. . ....+.+++++|+++.+++. ..++.|.
T Consensus 117 ------------------------------------------------~-~-~~~~~~~i~~~~~g~l~v~~-~~~~~i~ 145 (286)
T 1q7f_A 117 ------------------------------------------------A-T-ILQHPRGVTVDNKGRIIVVE-CKVMRVI 145 (286)
T ss_dssp ------------------------------------------------T-T-TCSCEEEEEECTTSCEEEEE-TTTTEEE
T ss_pred ------------------------------------------------C-c-cCCCceEEEEeCCCCEEEEE-CCCCEEE
Confidence 0 0 33457889999999866666 7789999
Q ss_pred EEECCcceeeeeec--cccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecC--CccEEEEEEccCCcEEE
Q psy14511 268 LWHEQEERLIQKLR--THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE--GDVVCGLKWSPNGRYLA 341 (488)
Q Consensus 268 i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~ 341 (488)
+||.. ++.+..+. .+...+..+++ +++++++...++.|++||... .....+..+ ...+..++++|+|++++
T Consensus 146 ~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~~G~l~v 222 (286)
T 1q7f_A 146 IFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG--QYLRQIGGEGITNYPIGVGINSNGEILI 222 (286)
T ss_dssp EECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC--CEEEEESCTTTSCSEEEEEECTTCCEEE
T ss_pred EEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC--CEEEEEccCCccCCCcEEEECCCCCEEE
Confidence 99965 45555543 34456788888 467777777889999999754 233333322 35678899999998877
Q ss_pred EEe-cC-eEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc--ccEEEEEEcCCC
Q psy14511 342 SGS-NN-TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ--ERILSAVLSPDQ 417 (488)
Q Consensus 342 ~~~-d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~s~~~ 417 (488)
+.. ++ .|.+||.. ++.+..+..+. ..+.+++++|+|
T Consensus 223 ~~~~~~~~i~~~~~~----------------------------------------g~~~~~~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 223 ADNHNNFNLTIFTQD----------------------------------------GQLISALESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp EECSSSCEEEEECTT----------------------------------------SCEEEEEEESSCCSCEEEEEEETTT
T ss_pred EeCCCCEEEEEECCC----------------------------------------CCEEEEEcccCCCCcceeEEECCCC
Confidence 775 33 67777632 22233333332 247899999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCc
Q psy14511 418 TCVAAASADETISIWNCFPRDK 439 (488)
Q Consensus 418 ~~l~t~~~dg~v~iw~~~~~~~ 439 (488)
+++++ +.|+.|++|++....+
T Consensus 263 ~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 263 SVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EEEEE-ETTTEEEEEECSCCCC
T ss_pred cEEEE-CCCCeEEEEEcccccc
Confidence 87777 6799999999876443
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=1.5e-16 Score=156.57 Aligned_cols=195 Identities=9% Similarity=0.019 Sum_probs=131.0
Q ss_pred CCceEEEEEcCCCCeEEEEeCCC----------CcEEEEECCc------ceeeeeec-cccccEEEEEe--cCCEEEEee
Q psy14511 241 NAYISCVAWKPRTTDLAVTNTCT----------EYIDLWHEQE------ERLIQKLR-THMHQVIAMCW--NGNLLSCGT 301 (488)
Q Consensus 241 ~~~i~~~~~~~~~~~l~~~~~~~----------~~i~i~d~~~------~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~ 301 (488)
...+..++|+|||+.|+++ +.+ ..|++||+.+ ++. ..+. .+...+..++| ||+.|+..+
T Consensus 129 ~~~~~~~~~spDg~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCM-AEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp CEEEEEEEEETTTTEEEEE-EEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CccccCcEECCCCCEEEEE-EecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEE
Confidence 4467789999999999988 555 5899999987 544 3444 45566666677 899998877
Q ss_pred cC--------CeEEEEECc-CCC--ccceeeecCCccEEEEEEccCCcEEEEEe-cC--eEEEEECCCCCCCcccce---
Q psy14511 302 IG--------GNILHYDVR-THS--DYPTAITREGDVVCGLKWSPNGRYLASGS-NN--TVKIWDFRQLDAKRPLGL--- 364 (488)
Q Consensus 302 ~d--------g~i~i~d~~-~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~--~i~iwd~~~~~~~~~~~~--- 364 (488)
.+ ..|++||+. ++. ........+...+..++|+|||++++++. ++ .|.+||+.+++.......
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSB
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccc
Confidence 55 379999998 441 33444455677899999999999666666 46 677777655543222111
Q ss_pred ----------eeeeecCCCCEEEEEccCCCCeEEEE--eCCCcceeEEEeeccccEEEE-EEcCCCCEEEEEeCCC--cE
Q psy14511 365 ----------IVPKLKREGRELVTSHGKQDCSLKMW--EYPRLHLIEELKIHQERILSA-VLSPDQTCVAAASADE--TI 429 (488)
Q Consensus 365 ----------~~~~~~~~~~~l~~~~g~~~~~i~i~--d~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~t~~~dg--~v 429 (488)
....|+|+++.+++ +.. +.++|| |+.+++ +..+..|...+..+ +++++.-++++++.+. .|
T Consensus 287 ~~~p~w~~~~~~~~~~~~~~~~~~--~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i 362 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLANGLIAVV--HGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEV 362 (662)
T ss_dssp SSCCCCSTTCCSEEECTTSCEEEE--EBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred ccCccccccCceEeEeCCCEEEEE--EEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEE
Confidence 11266788998888 455 777888 666555 67777787778777 5443333444555554 46
Q ss_pred EEEecCCCCccc
Q psy14511 430 SIWNCFPRDKKR 441 (488)
Q Consensus 430 ~iw~~~~~~~~~ 441 (488)
.+||+.+++...
T Consensus 363 ~~~d~~~g~~~~ 374 (662)
T 3azo_A 363 VELDTVTGRART 374 (662)
T ss_dssp EEEETTTCCEEE
T ss_pred EEEECCCCceEE
Confidence 666766766543
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=1.5e-16 Score=143.40 Aligned_cols=282 Identities=12% Similarity=0.130 Sum_probs=168.8
Q ss_pred CCceEEEee---------cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C---C--eEEEEeccccC
Q psy14511 4 NGNLLSCGT---------IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---N--TVKIWDFRQLD 68 (488)
Q Consensus 4 dg~~la~g~---------~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d---~--~i~vwd~~~~~ 68 (488)
||+++|... .++.|.+||+.+++. ..+ ..+..++|||||++||..+ + + .|.+||+.+++
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~ 96 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNAR--RFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS 96 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE--EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCce--EEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc
Confidence 788887642 367899999988763 233 4688999999999999886 2 3 37777877644
Q ss_pred cCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEE
Q psy14511 69 AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLL 148 (488)
Q Consensus 69 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (488)
... +..+.. +..+.|+|||+.|+++.. +. ........+ ....+..
T Consensus 97 ~~~----l~~~~~-~~~~~wspdg~~l~~~~~---~~-------~~~~~~~~~-------~~~~~~~------------- 141 (347)
T 2gop_A 97 SKK----ILEAKN-IRSLEWNEDSRKLLIVGF---KR-------REDEDFIFE-------DDVPAWF------------- 141 (347)
T ss_dssp EEE----EEEESE-EEEEEECTTSSEEEEEEE---CC-------CC----------------CCCC--------------
T ss_pred eEE----EEcCCC-ccceeECCCCCEEEEEEc---cC-------CCcCCcEEE-------cccceee-------------
Confidence 221 222333 999999999998888764 31 000000000 0000000
Q ss_pred eeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCC
Q psy14511 149 HGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTN 228 (488)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~ 228 (488)
++.-+.......|++|++.++
T Consensus 142 -----------------------------------------------------------~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 142 -----------------------------------------------------------DDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp -------------------------------------------------------------------CEEEEEEEETTTT
T ss_pred -----------------------------------------------------------cCcccccCccceEEEEECCCC
Confidence 000011112457889999888
Q ss_pred ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC------C-cEEEEECCcceeeeeeccccccEEEEEecCCEEEEee
Q psy14511 229 KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT------E-YIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGT 301 (488)
Q Consensus 229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~------~-~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 301 (488)
+....+.. . .+..++|+|+| .++++ ..+ . ...+|.+.+++. ..+..+ ..+..++.+|+.|+.++
T Consensus 163 ~~~~~l~~----~-~~~~~~~spdg-~~~~~-~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~spdg~~l~~~~ 233 (347)
T 2gop_A 163 EVIEEFEK----P-RFSSGIWHRDK-IVVNV-PHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAVDSDGERILLYG 233 (347)
T ss_dssp EEEEEEEE----E-TTCEEEEETTE-EEEEE-ECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEEEECSSCEEEEE
T ss_pred eEEeeecC----C-CcccccCCCCe-EEEEE-ecccccccccccccEEEeCCCce-EEeccC-cceeeECCCCCEEEEEE
Confidence 76333332 1 57789999999 66665 443 2 334444334443 334334 55666677898888776
Q ss_pred cC--------CeEEEEECcCCCccceeeecCCccEEE-EEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecC
Q psy14511 302 IG--------GNILHYDVRTHSDYPTAITREGDVVCG-LKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKR 371 (488)
Q Consensus 302 ~d--------g~i~i~d~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~ 371 (488)
.+ ..|++|| ++ ........+...+.. +.|+ ++ ++++++ ++.+++| +.+
T Consensus 234 ~~~~~~~~~~~~l~~~d--~~-~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~---------------- 291 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD--GK-EVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD---------------- 291 (347)
T ss_dssp CCSSSCCCSSCEEEEEC--SS-CEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES----------------
T ss_pred ccccCCccccceEEEEC--CC-ceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC----------------
Confidence 44 4688888 32 333444455677876 8999 88 777666 4667776 541
Q ss_pred CCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcE-EEEecCCCCccccc
Q psy14511 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETI-SIWNCFPRDKKRKA 443 (488)
Q Consensus 372 ~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v-~iw~~~~~~~~~~~ 443 (488)
++. ..+..+...|.+++|+| .++++++.++.. .+|.+. ++...+.
T Consensus 292 -----------------------g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~~~~lt 337 (347)
T 2gop_A 292 -----------------------GEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GEEKQLT 337 (347)
T ss_dssp -----------------------SSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SSEEECC
T ss_pred -----------------------Cce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-CcEEEec
Confidence 222 22233466789999999 677777777665 778776 5433333
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=1.2e-16 Score=146.90 Aligned_cols=214 Identities=13% Similarity=0.102 Sum_probs=137.1
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEE-------------------EEEcCCCCeEEEEe----CCCCc
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISC-------------------VAWKPRTTDLAVTN----TCTEY 265 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~~----~~~~~ 265 (488)
..++.++.++.|++|++.+++...+...+. ..... +.++|+++.+++.. ..+..
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~---~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDE---EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCT---TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEeccc---ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 446667778899999999988766665432 22222 35678887776542 35678
Q ss_pred EEEEECCcceeeeeeccccccEEEEEe---cCCEEEEeecC------CeEEEEECcCCCccceeeecC--CccEEEEEEc
Q psy14511 266 IDLWHEQEERLIQKLRTHMHQVIAMCW---NGNLLSCGTIG------GNILHYDVRTHSDYPTAITRE--GDVVCGLKWS 334 (488)
Q Consensus 266 i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~~i~~~~~s 334 (488)
|.+||+.+++..... .+...+..+.| +++.|+..+.+ ..|.+||+.... ...+..+ ...+..++|+
T Consensus 170 l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 170 LIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWI 246 (396)
T ss_dssp EEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEEC
T ss_pred EEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEEC
Confidence 999999887654444 45666777777 45666665543 368888886542 2222222 3357889999
Q ss_pred cCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE
Q psy14511 335 PNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL 413 (488)
Q Consensus 335 ~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 413 (488)
|+|++|+..+ ++ +...+.|++||+.+++...... ... .. +.|
T Consensus 247 pdg~~l~~~~~~~----------------------------------~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~ 289 (396)
T 3c5m_A 247 PDGSAMAYVSYFK----------------------------------GQTDRVIYKANPETLENEEVMV-MPP-CS-HLM 289 (396)
T ss_dssp TTSSCEEEEEEET----------------------------------TTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEE
T ss_pred CCCCEEEEEecCC----------------------------------CCccceEEEEECCCCCeEEeee-CCC-CC-CCc
Confidence 9999887764 21 1112335566655554332211 111 23 899
Q ss_pred cC-CCCEEEEEe----------------CCCcEEEEecCCCCccccccccC-----------CcceEEeecCCCceEEEE
Q psy14511 414 SP-DQTCVAAAS----------------ADETISIWNCFPRDKKRKARQVG-----------SGSSLEFAILKQPVSLTA 465 (488)
Q Consensus 414 s~-~~~~l~t~~----------------~dg~v~iw~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~~~~~~ 465 (488)
+| ||+++++++ .++.|++||+.+++......+.. ....+.|+|+++.+.+..
T Consensus 290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEe
Confidence 99 999888765 34789999999887665544443 256789999999876543
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=1.4e-15 Score=150.36 Aligned_cols=292 Identities=12% Similarity=0.095 Sum_probs=180.6
Q ss_pred CCceEEEeecCC-----eEEEEEcccCcccceee------cccCceEEEEEEccCCcEEEEec--CC----eEEEEeccc
Q psy14511 4 NGNLLSCGTIGG-----NILHYDVRTHSDYPTAI------TREGDVVCGLKWSPNGRYLASGS--NN----TVKIWDFRQ 66 (488)
Q Consensus 4 dg~~la~g~~dg-----~i~iwd~~~~~~~~~~~------~~h~~~V~~l~~sp~g~~las~~--d~----~i~vwd~~~ 66 (488)
||++++....++ .+.+.+...++ ....+ .+|...+..++|||||++||.+. +| .|++||+.+
T Consensus 82 dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 82 KGKRYFYFYNTGLQNQRVLYVQDSLEGE-ARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp ETTEEEEEEECSSCSSCEEEEESSTTSC-CEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred ECCEEEEEEEcCCceEEEEEEEcCCCCC-cEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 788777554322 33444433333 11111 24555789999999999999875 22 899999998
Q ss_pred cCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEE
Q psy14511 67 LDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSF 146 (488)
Q Consensus 67 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (488)
++.... .+ ....+..++|+|||+.|+++.. ++. .+.. .....
T Consensus 161 g~~~~~--~~--~~~~~~~~~wspDg~~l~~~~~---~~~-------~~~~----~~~~~-------------------- 202 (710)
T 2xdw_A 161 AKELPD--VL--ERVKFSCMAWTHDGKGMFYNAY---PQQ-------DGKS----DGTET-------------------- 202 (710)
T ss_dssp TEEEEE--EE--EEECSCCEEECTTSSEEEEEEC---CCC-------SSCC----SSSCC--------------------
T ss_pred CCCCcc--cc--cCcccceEEEEeCCCEEEEEEE---CCc-------cccc----ccccc--------------------
Confidence 654321 11 1223678999999999888775 432 0000 00000
Q ss_pred EEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECC
Q psy14511 147 LLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTK 226 (488)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~ 226 (488)
. ......|++|++.
T Consensus 203 --------------------------------------------------------------~----~~~~~~v~~~~l~ 216 (710)
T 2xdw_A 203 --------------------------------------------------------------S----TNLHQKLYYHVLG 216 (710)
T ss_dssp --------------------------------------------------------------C----CCCCCEEEEEETT
T ss_pred --------------------------------------------------------------c----cCCCCEEEEEECC
Confidence 0 0023467778877
Q ss_pred CCceE--EEEecCCCCCCceEEEEEcCCCCeEEEEeCC----CCcEEEEECCc------ce-eeeeeccccccEE-EEEe
Q psy14511 227 TNKTQ--LLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----TEYIDLWHEQE------ER-LIQKLRTHMHQVI-AMCW 292 (488)
Q Consensus 227 ~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~~i~i~d~~~------~~-~~~~~~~~~~~v~-~~~~ 292 (488)
+++.. .+..... +...+..+.|+|||++|+..... +..|++||+.+ +. ....+..+...+. .+..
T Consensus 217 t~~~~~~~v~~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~ 295 (710)
T 2xdw_A 217 TDQSEDILCAEFPD-EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTN 295 (710)
T ss_dssp SCGGGCEEEECCTT-CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEE
T ss_pred CCcccceEEeccCC-CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEec
Confidence 76532 2333322 45567899999999999887321 56899999876 42 3455555444433 3444
Q ss_pred cCCEEEEeecC----CeEEEEECcCCCc-cceeeecCCc--cEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccce
Q psy14511 293 NGNLLSCGTIG----GNILHYDVRTHSD-YPTAITREGD--VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGL 364 (488)
Q Consensus 293 ~~~~l~~~~~d----g~i~i~d~~~~~~-~~~~~~~~~~--~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~ 364 (488)
+|+.|+..+.. +.|.+||+.++.. ....+..+.. .+..++|++++.++++.. ++..+
T Consensus 296 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~--------------- 360 (710)
T 2xdw_A 296 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT--------------- 360 (710)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE---------------
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE---------------
Confidence 78877766543 3699999987532 2344444443 677888887777777665 34322
Q ss_pred eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEE-e---CCCcEEEEecCCCC
Q psy14511 365 IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAA-S---ADETISIWNCFPRD 438 (488)
Q Consensus 365 ~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~-~---~dg~v~iw~~~~~~ 438 (488)
|++|++.+++.+..+..+.+.+..++++|+++.++.. + ..+.|+.||+.+++
T Consensus 361 ----------------------l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 ----------------------LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ----------------------EEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ----------------------EEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 3334444455556666677788999999999866643 2 34789999999877
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.76 E-value=1.3e-15 Score=150.22 Aligned_cols=288 Identities=8% Similarity=-0.050 Sum_probs=170.8
Q ss_pred cCCceEEEeecCC---eEEEEEcc--cCcccceee------cccCceEEEEEEccCCcEEEEe-----c-CCeEEEEecc
Q psy14511 3 WNGNLLSCGTIGG---NILHYDVR--THSDYPTAI------TREGDVVCGLKWSPNGRYLASG-----S-NNTVKIWDFR 65 (488)
Q Consensus 3 ~dg~~la~g~~dg---~i~iwd~~--~~~~~~~~~------~~h~~~V~~l~~sp~g~~las~-----~-d~~i~vwd~~ 65 (488)
+||++++....++ .-.||-.. .++ ....+ .+|...+..++|||||++||.+ + +..|++||+.
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQ-EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSC-CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCC-cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 3788888766543 34455443 333 22222 2566689999999999999954 3 4689999999
Q ss_pred ccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEE
Q psy14511 66 QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS 145 (488)
Q Consensus 66 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (488)
+++.... ..+... ....++|+|||+.|+.+.. |.. ..+.. ..
T Consensus 156 tg~~~~~-~~~~~~--~~~~~~wspDg~~l~~~~~---d~~------~~~~~-----~~--------------------- 197 (695)
T 2bkl_A 156 SGEWSKV-DVIEGG--KYATPKWTPDSKGFYYEWL---PTD------PSIKV-----DE--------------------- 197 (695)
T ss_dssp TCCBCSS-CCBSCC--TTCCCEECTTSSEEEEEEC---CCC------TTSCG-----GG---------------------
T ss_pred CCCCcCC-cccCcc--cccceEEecCCCEEEEEEe---cCC------CCCcc-----cc---------------------
Confidence 8664311 111111 1268899999998888775 432 00000 00
Q ss_pred EEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEEC
Q psy14511 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNT 225 (488)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~ 225 (488)
......|++|++
T Consensus 198 --------------------------------------------------------------------~~~~~~v~~~~l 209 (695)
T 2bkl_A 198 --------------------------------------------------------------------RPGYTTIRYHTL 209 (695)
T ss_dssp --------------------------------------------------------------------GGGGCEEEEEET
T ss_pred --------------------------------------------------------------------CCCCCEEEEEEC
Confidence 001234666666
Q ss_pred CCCce--EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC----cEEEEECCcceeeeeeccccccEEEEEe-cCCEEE
Q psy14511 226 KTNKT--QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE----YIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLS 298 (488)
Q Consensus 226 ~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~ 298 (488)
.++.. ..+..... +...+..+.|+|+|++|+++ +.++ .|.+++..+++ ...+..+...+....+ +++ ++
T Consensus 210 ~t~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~-~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~-l~ 285 (695)
T 2bkl_A 210 GTEPSKDTVVHERTG-DPTTFLQSDLSRDGKYLFVY-ILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDR-FY 285 (695)
T ss_dssp TSCGGGCEEEECCCC-CTTCEEEEEECTTSCCEEEE-EEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEEETTE-EE
T ss_pred CCCchhceEEEecCC-CCEEEEEEEECCCCCEEEEE-EeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEecCCc-EE
Confidence 65542 23333332 45678899999999999888 4444 67777665543 3334344444444444 666 55
Q ss_pred Eeec----CCeEEEEECcCCCc--cceeeecC-CccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeec
Q psy14511 299 CGTI----GGNILHYDVRTHSD--YPTAITRE-GDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLK 370 (488)
Q Consensus 299 ~~~~----dg~i~i~d~~~~~~--~~~~~~~~-~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~ 370 (488)
..+. ++.|.+||+.++.. ....+..+ ...+..++|+ ++.++++.. ++..++|.+..
T Consensus 286 ~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~--------------- 349 (695)
T 2bkl_A 286 VLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL--------------- 349 (695)
T ss_dssp EEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET---------------
T ss_pred EEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC---------------
Confidence 4443 58899999977542 12333333 4557788887 666666666 46666664331
Q ss_pred CCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec-cccEEEEEEcCCCCEEEEEe----CCCcEEEEecCCCCcc
Q psy14511 371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH-QERILSAVLSPDQTCVAAAS----ADETISIWNCFPRDKK 440 (488)
Q Consensus 371 ~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~t~~----~dg~v~iw~~~~~~~~ 440 (488)
+++....+..+ .+.+..++++|+++.++... ..+.|++||+.+++..
T Consensus 350 -----------------------~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 350 -----------------------KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp -----------------------TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred -----------------------CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 12223333333 45677788888887666332 3478999999887654
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=1.4e-16 Score=156.77 Aligned_cols=260 Identities=12% Similarity=-0.003 Sum_probs=156.3
Q ss_pred ecCCeEEEEEcccCcccceeecccCceEE---------EEEEc--cCCcE-EEEec--CCeEEEEecc--c-cCcCCCcc
Q psy14511 12 TIGGNILHYDVRTHSDYPTAITREGDVVC---------GLKWS--PNGRY-LASGS--NNTVKIWDFR--Q-LDAKRPQV 74 (488)
Q Consensus 12 ~~dg~i~iwd~~~~~~~~~~~~~h~~~V~---------~l~~s--p~g~~-las~~--d~~i~vwd~~--~-~~~~~~~~ 74 (488)
+.++...||....+.. ...+..|...+. ...|+ |||++ |+.++ +..|.+|++. + ++ ...+.
T Consensus 44 ~~~~~~~l~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~ 121 (662)
T 3azo_A 44 AEAGRATLVRRRADGA-EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLT 121 (662)
T ss_dssp TTTTEEEEEEECTTSC-EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECS
T ss_pred ccCCcEEEEEECCCCC-cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEecc
Confidence 3478899999644442 345666666666 56666 99998 88776 4667777665 2 22 22221
Q ss_pred ccc--ccccceeEEEEecCCCeEEeeeCCccc----------ceEEEEecCC------Ceeeeeee-cCCCccccccccc
Q psy14511 75 NNQ--CHLSAVKAIAWCPWEPTLLATGGGICD----------QTVRLWNSMN------GKEKCHVK-TDSQQANDETISY 135 (488)
Q Consensus 75 ~~~--~h~~~v~~l~~~~~~~~l~~~~~~~~d----------~~i~vwd~~~------~~~~~~~~-~~~~~~~~~~~~~ 135 (488)
... .|...+..++|+|||+.|+++.. + ..|++||+.+ ++.. .+. .+...
T Consensus 122 ~~~~~~~~~~~~~~~~spDg~~l~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~-------- 189 (662)
T 3azo_A 122 PVSAVGGGLRWADPVLLPERGEVWCMAE---EFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRF-------- 189 (662)
T ss_dssp CCCCSTTCEEEEEEEEETTTTEEEEEEE---EECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSE--------
T ss_pred CCccCCCCccccCcEECCCCCEEEEEEe---cccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCc--------
Confidence 111 16678899999999999888775 4 6899999877 4322 221 11111
Q ss_pred cccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCC--CcEEE
Q psy14511 136 REQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGY--HDTLA 213 (488)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 213 (488)
...+.|++ ..++.
T Consensus 190 -----------------------------------------------------------------~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 190 -----------------------------------------------------------------VTGPRLSPDGRQAVW 204 (662)
T ss_dssp -----------------------------------------------------------------ECCCEECTTSSEEEE
T ss_pred -----------------------------------------------------------------ccCceECCCCCEEEE
Confidence 11122332 23444
Q ss_pred EECC--------CeEEEEECC-CC---ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC--cEEEEECCcceeeee
Q psy14511 214 VALD--------TSVYTWNTK-TN---KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE--YIDLWHEQEERLIQK 279 (488)
Q Consensus 214 ~~~d--------~~v~iw~~~-~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~i~i~d~~~~~~~~~ 279 (488)
++.+ ..|++||+. ++ +...+... +...+..++|+|||+.++++ ..++ .|.+||..+++....
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~---~~~~~~~~~~spdg~l~~~~-~~~~~~~l~~~~~~~~~~~~l 280 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG---PEEAIAQAEWAPDGSLIVAT-DRTGWWNLHRVDPATGAATQL 280 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE---TTBCEEEEEECTTSCEEEEE-CTTSSCEEEEECTTTCCEEES
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC---CCceEcceEECCCCeEEEEE-CCCCCeEEEEEECCCCceeec
Confidence 4433 479999999 56 33333321 46789999999999966666 7788 566667656655444
Q ss_pred ecccccc--------EEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEE--EEe-c-
Q psy14511 280 LRTHMHQ--------VIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA--SGS-N- 345 (488)
Q Consensus 280 ~~~~~~~--------v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~--~~~-d- 345 (488)
...+... +..+++ ++++++++.. +.+++|.+.........+..+...+..+. ++++..++ +++ +
T Consensus 281 ~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~ 358 (662)
T 3azo_A 281 CRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATL-TVSGTRAVGVAASPRT 358 (662)
T ss_dssp SCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEE-EEETTEEEEEEEETTE
T ss_pred ccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEE-ecCCCEEEEEEcCCCC
Confidence 3332221 345666 6788888888 99999944322223566667777777661 44444333 333 2
Q ss_pred -CeEEEEECCCC
Q psy14511 346 -NTVKIWDFRQL 356 (488)
Q Consensus 346 -~~i~iwd~~~~ 356 (488)
..+.++|+.++
T Consensus 359 ~~~i~~~d~~~g 370 (662)
T 3azo_A 359 AYEVVELDTVTG 370 (662)
T ss_dssp EEEEEEEETTTC
T ss_pred CCEEEEEECCCC
Confidence 34555555443
No 179
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.74 E-value=1.9e-14 Score=127.46 Aligned_cols=296 Identities=11% Similarity=0.043 Sum_probs=205.3
Q ss_pred EEEecCCCeEEeeeCCc--ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511 86 IAWCPWEPTLLATGGGI--CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK 163 (488)
Q Consensus 86 l~~~~~~~~l~~~~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (488)
....|+++.++++...+ .++.|.+.|..+++.+..+.....+ . +.++++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spD--------------------------- 88 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADD--------------------------- 88 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTT---------------------------
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCC---------------------------
Confidence 44578998888876521 1579999999999988887765443 1 333332
Q ss_pred ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE----------CCCeEEEEECCCCceEEE
Q psy14511 164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA----------LDTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~d~~v~iw~~~~~~~~~~ 233 (488)
...++++. .++.|.+||..+.+....
T Consensus 89 --------------------------------------------G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~ 124 (386)
T 3sjl_D 89 --------------------------------------------GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTAD 124 (386)
T ss_dssp --------------------------------------------SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred --------------------------------------------CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEE
Confidence 23444443 357899999999998887
Q ss_pred EecCCCC----CCceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEE
Q psy14511 234 VEYPTYD----NAYISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNIL 307 (488)
Q Consensus 234 ~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~ 307 (488)
+..+... ......++++|||++++++... ++.|.++|+.+++.+.++.... ...+.. ..+.+++.+.||.+.
T Consensus 125 I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~ 202 (386)
T 3sjl_D 125 IELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLA 202 (386)
T ss_dssp EEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEE
T ss_pred EECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEE
Confidence 7664200 1245679999999999998333 6899999999999988885422 122223 567777888899999
Q ss_pred EEECcCCCccceeeecC----CccEE-EEEEc-cCCcEEEEEecCeEEEEECCCCC--CCcccc---------------e
Q psy14511 308 HYDVRTHSDYPTAITRE----GDVVC-GLKWS-PNGRYLASGSNNTVKIWDFRQLD--AKRPLG---------------L 364 (488)
Q Consensus 308 i~d~~~~~~~~~~~~~~----~~~i~-~~~~s-~~~~~l~~~~d~~i~iwd~~~~~--~~~~~~---------------~ 364 (488)
+.++............+ ..++. ...|. ++|+++....++.+.+.|+.... ....+. .
T Consensus 203 ~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~ 282 (386)
T 3sjl_D 203 KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 282 (386)
T ss_dssp EEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS
T ss_pred EEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCc
Confidence 99987632222111111 12221 24564 68876665556999999997653 222221 0
Q ss_pred eeeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-EEEEE-eCCCcEEEEec
Q psy14511 365 IVPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-CVAAA-SADETISIWNC 434 (488)
Q Consensus 365 ~~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~-~~dg~v~iw~~ 434 (488)
....++++++.++++... ..+.|.++|+++++.+.++.-- .++++++++||++ +|++. ..++.|.++|.
T Consensus 283 q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred ceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 012778899998886431 1357999999999999887643 3688999999997 66664 45899999999
Q ss_pred CCCCccccccccCCcceEEeecC
Q psy14511 435 FPRDKKRKARQVGSGSSLEFAIL 457 (488)
Q Consensus 435 ~~~~~~~~~~~~~~v~~~~~s~~ 457 (488)
.+++........+....|.+++|
T Consensus 362 ~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 362 ESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp TTCCEEEEECCCCSSCCEEEECC
T ss_pred CCCcEEEEecCCCCCceeEECCc
Confidence 99999888888888888999887
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=4.9e-15 Score=132.02 Aligned_cols=216 Identities=9% Similarity=0.073 Sum_probs=151.1
Q ss_pred CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-eeeee---------ccccc
Q psy14511 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-LIQKL---------RTHMH 285 (488)
Q Consensus 216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-~~~~~---------~~~~~ 285 (488)
.++.|.+||..+++....... + +-..+..++++|+|+.+++. ..++.|+.||..... .+..+ ..+..
T Consensus 67 ~~~~i~~~d~~~g~~~~~~~~-~-~~~~p~gia~d~~g~l~v~d-~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 67 EEDTILVIDPNNAEILQSSGK-N-LFYLPHGLSIDTDGNYWVTD-VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CSCCEEEECTTTCCEEEEECT-T-TCSSEEEEEECTTSCEEEEE-TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred cCCcEEEEECCCCeEEeccCC-C-ccCCceEEEECCCCCEEEEE-CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 367899999988887654431 2 44578899999999966666 888999999986542 34444 23344
Q ss_pred cEEEEEec---CCEEEEee-cCCeEEEEECcCCCccceeeec----------CCccEEEEEEccC-CcEEEEEe-cCeEE
Q psy14511 286 QVIAMCWN---GNLLSCGT-IGGNILHYDVRTHSDYPTAITR----------EGDVVCGLKWSPN-GRYLASGS-NNTVK 349 (488)
Q Consensus 286 ~v~~~~~~---~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~----------~~~~i~~~~~s~~-~~~l~~~~-d~~i~ 349 (488)
....++++ ++++++.+ .++.|++||.. + .....+.. +-.....++++|+ ++++++.. ++.|+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-G-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTT-S-CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-C-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 67788883 56666665 68999999954 2 23333322 1233789999999 66555555 49999
Q ss_pred EEECCCCCCCcccce-------eeeeecCCCCEEEEE-----ccCCCCeEEEEeCCCcceeEEEe---eccccEEEEEEc
Q psy14511 350 IWDFRQLDAKRPLGL-------IVPKLKREGRELVTS-----HGKQDCSLKMWEYPRLHLIEELK---IHQERILSAVLS 414 (488)
Q Consensus 350 iwd~~~~~~~~~~~~-------~~~~~~~~~~~l~~~-----~g~~~~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~s 414 (488)
+||..+++....+.. ...+++| +..+... +...+..+++||..+++.+..+. ++...+..++++
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 999986654333211 1225677 3322221 13445689999999999988873 566779999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCC
Q psy14511 415 PDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 415 ~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
|+|.++++...++.|++|++...
T Consensus 301 ~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 301 EDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp TTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCCCEEEEECCCCEEEEEeCCcc
Confidence 99988888889999999998753
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=1.6e-15 Score=136.56 Aligned_cols=169 Identities=7% Similarity=0.107 Sum_probs=106.3
Q ss_pred eEEEEEcCCCCeEEEEeCC--------------------------CCcEEEEECCcceeeeeeccccccEEEEEe--cCC
Q psy14511 244 ISCVAWKPRTTDLAVTNTC--------------------------TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGN 295 (488)
Q Consensus 244 i~~~~~~~~~~~l~~~~~~--------------------------~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~ 295 (488)
+..++|+|+|+.|++++.. ...|.+||+.+++.+..+.. . .+..+.| ++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence 6667777777766666211 35789999988776444544 3 5666677 56
Q ss_pred EEEEeecCC-------eEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCCCCCcccceeee
Q psy14511 296 LLSCGTIGG-------NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLIVP 367 (488)
Q Consensus 296 ~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~~~~~~~~~ 367 (488)
+++++..++ ...+|.+.+ .. ...+..+ ..+..+ +|+|++|+..+. +. ..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~-------~~----------- 239 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWED-GK-EEKMFEK-VSFYAV--DSDGERILLYGKPEK-------KY----------- 239 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEET-TE-EEEEEEE-ESEEEE--EECSSCEEEEECCSS-------SC-----------
T ss_pred EEEEEecccccccccccccEEEeCC-Cc-eEEeccC-cceeeE--CCCCCEEEEEEcccc-------CC-----------
Confidence 666665442 334444433 22 2333333 444443 888888877652 10 00
Q ss_pred eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEE-EEEcCCCCEEEEEeCCCcEEEEecCCCCcccccccc
Q psy14511 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILS-AVLSPDQTCVAAASADETISIWNCFPRDKKRKARQV 446 (488)
Q Consensus 368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~ 446 (488)
......|++|| +++.......|...+.. +.|+ |+ ++++++.++.+++| +.+++......+.
T Consensus 240 -------------~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~ 301 (347)
T 2gop_A 240 -------------MSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGR 301 (347)
T ss_dssp -------------CCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSS
T ss_pred -------------ccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCC
Confidence 12245677777 55544444456677886 9999 88 99999999999999 8866555555556
Q ss_pred CCcceEEeec
Q psy14511 447 GSGSSLEFAI 456 (488)
Q Consensus 447 ~~v~~~~~s~ 456 (488)
+.+.++.|+|
T Consensus 302 ~~v~~~~~s~ 311 (347)
T 2gop_A 302 HWIMGFDVDE 311 (347)
T ss_dssp SEEEEEEESS
T ss_pred CeEEeeeeeC
Confidence 7788899998
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=2.7e-14 Score=127.01 Aligned_cols=259 Identities=10% Similarity=0.009 Sum_probs=169.3
Q ss_pred cCCeEEEEEcccCcccceeec-----ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEE
Q psy14511 13 IGGNILHYDVRTHSDYPTAIT-----REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAI 86 (488)
Q Consensus 13 ~dg~i~iwd~~~~~~~~~~~~-----~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l 86 (488)
.++.|.++|.++++.....+. ........+++. ++++.++.. ++.|.+||..+++....+ . .......+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i---~-~~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI---T-GFTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE---E-CCSSEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc---C-CCCCCcEE
Confidence 488999999998874433221 122346778775 344444444 899999999886543333 2 33568899
Q ss_pred EEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccc
Q psy14511 87 AWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTV 166 (488)
Q Consensus 87 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (488)
++++++ .++++... ++.|.+||+.+++....+.........
T Consensus 90 ~~~~~g-~lyv~~~~--~~~v~~iD~~t~~~~~~i~~g~~~~~~------------------------------------ 130 (328)
T 3dsm_A 90 HFLSDE-KAYVTQIW--DYRIFIINPKTYEITGYIECPDMDMES------------------------------------ 130 (328)
T ss_dssp EEEETT-EEEEEEBS--CSEEEEEETTTTEEEEEEECTTCCTTT------------------------------------
T ss_pred EEeCCC-eEEEEECC--CCeEEEEECCCCeEEEEEEcCCccccC------------------------------------
Confidence 999998 56666632 899999999998876655443200000
Q ss_pred cceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511 167 SPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYI 244 (488)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i 244 (488)
.....+.+.++.++++. .++.|.++|..+++....+... ...
T Consensus 131 --------------------------------~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g----~~p 174 (328)
T 3dsm_A 131 --------------------------------GSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIG----IQP 174 (328)
T ss_dssp --------------------------------CBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECS----SCB
T ss_pred --------------------------------CCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC----CCc
Confidence 00001222345667666 4889999999999887766642 245
Q ss_pred EEEEEcCCCCeEEEEeCCC----------CcEEEEECCcceeeeeeccc-cccEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511 245 SCVAWKPRTTDLAVTNTCT----------EYIDLWHEQEERLIQKLRTH-MHQVIAMCW--NGNLLSCGTIGGNILHYDV 311 (488)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~----------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~dg~i~i~d~ 311 (488)
..++++|+|+.++++ ..+ +.|.++|..+++....+... ......+++ +++.++++.. .|.+||.
T Consensus 175 ~~i~~~~dG~l~v~~-~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~ 251 (328)
T 3dsm_A 175 TSLVMDKYNKMWTIT-DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPV 251 (328)
T ss_dssp CCCEECTTSEEEEEB-CCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEET
T ss_pred cceEEcCCCCEEEEE-CCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEEC
Confidence 678999999866655 443 78999999988877666432 235677888 4788877655 8999999
Q ss_pred cCCCcccee-eecCCccEEEEEEcc-CCcEEEEE----e-cCeEEEEECC
Q psy14511 312 RTHSDYPTA-ITREGDVVCGLKWSP-NGRYLASG----S-NNTVKIWDFR 354 (488)
Q Consensus 312 ~~~~~~~~~-~~~~~~~i~~~~~s~-~~~~l~~~----~-d~~i~iwd~~ 354 (488)
.+++..... +.........++++| +++++++. . ++.|.+||..
T Consensus 252 ~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 252 EADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp TCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 876432111 222245688999999 45555554 3 3667777655
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.70 E-value=9.9e-15 Score=130.04 Aligned_cols=241 Identities=12% Similarity=0.074 Sum_probs=162.3
Q ss_pred ccCCceEEEeecC------------------------CeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-C
Q psy14511 2 CWNGNLLSCGTIG------------------------GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N 56 (488)
Q Consensus 2 ~~dg~~la~g~~d------------------------g~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d 56 (488)
+.+|+++++...+ +.|.+||..+++.+...-.++......++++|+|+++++.. +
T Consensus 32 d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~ 111 (329)
T 3fvz_A 32 DSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL 111 (329)
T ss_dssp CTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT
T ss_pred CCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCC
Confidence 3478888887766 47999999888754333335556789999999999888877 8
Q ss_pred CeEEEEeccccCcCCCcccc---------cccccceeEEEEec-CCCeEEeeeC-CcccceEEEEecCCCeeeeeeecCC
Q psy14511 57 NTVKIWDFRQLDAKRPQVNN---------QCHLSAVKAIAWCP-WEPTLLATGG-GICDQTVRLWNSMNGKEKCHVKTDS 125 (488)
Q Consensus 57 ~~i~vwd~~~~~~~~~~~~~---------~~h~~~v~~l~~~~-~~~~l~~~~~-~~~d~~i~vwd~~~~~~~~~~~~~~ 125 (488)
+.|++||..... ..+..+ .++......++++| ++. ++++.+ . ++.|++|+ .+++.+..+....
T Consensus 112 ~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~--~~~I~~~~-~~g~~~~~~~~~g 185 (329)
T 3fvz_A 112 HQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYC--NSRIVQFS-PSGKFVTQWGEES 185 (329)
T ss_dssp TEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSS--CCEEEEEC-TTSCEEEEECEEC
T ss_pred CEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCC--CCeEEEEc-CCCCEEEEeccCC
Confidence 999999986421 112212 23445789999999 665 555542 2 88999999 5666554443221
Q ss_pred CccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeee
Q psy14511 126 QQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD 205 (488)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (488)
..... ..........+.
T Consensus 186 ~~~~~---------------------------------------------------------------~~~~~~~p~gia 202 (329)
T 3fvz_A 186 SGSSP---------------------------------------------------------------RPGQFSVPHSLA 202 (329)
T ss_dssp CSSSC---------------------------------------------------------------CTTEESCEEEEE
T ss_pred CCCCC---------------------------------------------------------------CCcccCCCcEEE
Confidence 00000 000000112233
Q ss_pred eCC--CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEE------eCCCCcEEEEECCccee
Q psy14511 206 WGY--HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT------NTCTEYIDLWHEQEERL 276 (488)
Q Consensus 206 ~~~--~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~------~~~~~~i~i~d~~~~~~ 276 (488)
+++ +.++++. .++.|++|+..+++....+.... +...+..++++| +..+... ...+..|++|+..+++.
T Consensus 203 ~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~ 280 (329)
T 3fvz_A 203 LVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-FGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI 280 (329)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-TTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCE
T ss_pred EECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-cCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeE
Confidence 332 4565555 78899999999888887776555 667788999999 3222222 13455899999999988
Q ss_pred eeeec---cccccEEEEEe--cCCEEEEeecCCeEEEEECcC
Q psy14511 277 IQKLR---THMHQVIAMCW--NGNLLSCGTIGGNILHYDVRT 313 (488)
Q Consensus 277 ~~~~~---~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~ 313 (488)
+..+. .+......+++ +|+++++...++.|++|++..
T Consensus 281 ~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 281 IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 88873 56667888888 577888888899999999865
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=2.1e-14 Score=128.49 Aligned_cols=221 Identities=10% Similarity=0.040 Sum_probs=150.2
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC----CeEEEEECcC
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG----GNILHYDVRT 313 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~i~i~d~~~ 313 (488)
+...+.+++|+|+++.++++ ..++.|.+||..+++.......+...+.++++ +++++++...+ +.|.+||...
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLD-VFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred cCccccCcEECCCCCEEEEE-CCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 44457899999999866666 88899999999887665544345677899998 56777766665 6899999887
Q ss_pred CCccceeee--cCCccEEEEEEccCCcEEEEEec-------CeEEEEECCCCCCCcccce----eeeeecCCCCEEEEEc
Q psy14511 314 HSDYPTAIT--REGDVVCGLKWSPNGRYLASGSN-------NTVKIWDFRQLDAKRPLGL----IVPKLKREGRELVTSH 380 (488)
Q Consensus 314 ~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~d-------~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~l~~~~ 380 (488)
.. ....+. .+...+..++++|+|+++++... +.|..+|..+.+....... ...+|+|+++.++++
T Consensus 122 ~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~- 199 (333)
T 2dg1_A 122 DN-LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT- 199 (333)
T ss_dssp CS-CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEE-
T ss_pred CE-EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEE-
Confidence 53 221222 23456899999999998887652 4566666554332211111 112789999977664
Q ss_pred cCCCCeEEEEeCCC-cceeEEE--------eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc-cc----
Q psy14511 381 GKQDCSLKMWEYPR-LHLIEEL--------KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR-QV---- 446 (488)
Q Consensus 381 g~~~~~i~i~d~~~-~~~~~~~--------~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~-~~---- 446 (488)
...++.|++||+.+ ++.+..+ .++ ..+..++++++|+++++...++.|.+||.. ++...... ..
T Consensus 200 ~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g 277 (333)
T 2dg1_A 200 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEG 277 (333)
T ss_dssp EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGT
T ss_pred eCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccc
Confidence 45578999999863 4333221 112 367889999999988888888999999984 44332222 11
Q ss_pred --CCcceEEeecCCCceEEEE
Q psy14511 447 --GSGSSLEFAILKQPVSLTA 465 (488)
Q Consensus 447 --~~v~~~~~s~~~~~~~~~~ 465 (488)
..+.+++|+|+++.+.+..
T Consensus 278 ~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 278 HMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp CSCBCCEEEECTTSCEEEEEE
T ss_pred cccCcceEEECCCCCEEEEEe
Confidence 1578999999987664443
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.69 E-value=4e-14 Score=140.52 Aligned_cols=290 Identities=11% Similarity=0.036 Sum_probs=170.9
Q ss_pred CCceEEEeecCCe---EEEEEccc----Cccccee------ecccCceEEEEEEccCCcEEEEec-C-----CeEEEEec
Q psy14511 4 NGNLLSCGTIGGN---ILHYDVRT----HSDYPTA------ITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDF 64 (488)
Q Consensus 4 dg~~la~g~~dg~---i~iwd~~~----~~~~~~~------~~~h~~~V~~l~~sp~g~~las~~-d-----~~i~vwd~ 64 (488)
||++++....++. -.||-... +...... -.+|...+..++|||||++||.+. + ..|++||+
T Consensus 117 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl 196 (741)
T 1yr2_A 117 RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGV 196 (741)
T ss_dssp ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEET
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEEC
Confidence 7888886654432 55665542 2222222 133445789999999999999876 2 46999999
Q ss_pred cccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeE
Q psy14511 65 RQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHL 144 (488)
Q Consensus 65 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (488)
.+++... ...+...+..++|+|| +.|+.+.. ++... .+.. .
T Consensus 197 ~tg~~~~----~~~~~~~~~~~~wspD-~~l~~~~~---~~~~~-----~~~~----~---------------------- 237 (741)
T 1yr2_A 197 ADGKPLA----DELKWVKFSGLAWLGN-DALLYSRF---AEPKE-----GQAF----Q---------------------- 237 (741)
T ss_dssp TTCCEEE----EEEEEEESCCCEESTT-SEEEEEEC---CCC--------------------------------------
T ss_pred CCCCCCC----ccCCCceeccEEEECC-CEEEEEEe---cCccc-----cccc----c----------------------
Confidence 9865422 1112223468899999 88888775 43210 0000 0
Q ss_pred EEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEE
Q psy14511 145 SFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWN 224 (488)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~ 224 (488)
.......|++|+
T Consensus 238 --------------------------------------------------------------------~~~~~~~v~~~~ 249 (741)
T 1yr2_A 238 --------------------------------------------------------------------ALNYNQTVWLHR 249 (741)
T ss_dssp ---------------------------------------------------------------------CCCCCEEEEEE
T ss_pred --------------------------------------------------------------------cCCCCCEEEEEE
Confidence 000134566677
Q ss_pred CCCCce--EEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----CCcEEEEECCcc--eeeeeecccccc-EEEEEecCC
Q psy14511 225 TKTNKT--QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----TEYIDLWHEQEE--RLIQKLRTHMHQ-VIAMCWNGN 295 (488)
Q Consensus 225 ~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~~i~i~d~~~~--~~~~~~~~~~~~-v~~~~~~~~ 295 (488)
+.++.. ..+..... +...+..+.|+|||++|+..+.. ...|++||+.++ +....+..+... ...+..+++
T Consensus 250 lgt~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~ 328 (741)
T 1yr2_A 250 LGTPQSADQPVFATPE-LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGD 328 (741)
T ss_dssp TTSCGGGCEEEECCTT-CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETT
T ss_pred CCCCchhCEEEeccCC-CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCC
Confidence 665542 22333222 33458899999999999887322 348999998776 314444444333 333444888
Q ss_pred EEEEeec----CCeEEEEECcCC-CccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeee
Q psy14511 296 LLSCGTI----GGNILHYDVRTH-SDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKL 369 (488)
Q Consensus 296 ~l~~~~~----dg~i~i~d~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~ 369 (488)
.|+..+. ++.|.+||+.++ ......+..+...+..++++ ++.++++.. ++..+||.+.
T Consensus 329 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~--------------- 392 (741)
T 1yr2_A 329 QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD--------------- 392 (741)
T ss_dssp EEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE---------------
T ss_pred EEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe---------------
Confidence 8887765 355999998764 23344445555556677776 455555555 4555555432
Q ss_pred cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee-ccccEEEEEEcCCCCEEEEEe----CCCcEEEEecCCCCcc
Q psy14511 370 KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI-HQERILSAVLSPDQTCVAAAS----ADETISIWNCFPRDKK 440 (488)
Q Consensus 370 ~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~t~~----~dg~v~iw~~~~~~~~ 440 (488)
+ +++....+.. +.+.+..+.++||++.|+... ..+.|++||+.+++..
T Consensus 393 ----------------------~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 393 ----------------------L-DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp ----------------------T-TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred ----------------------C-CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 1 1223334443 356688899999988666332 3478999999887643
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=1.5e-14 Score=129.37 Aligned_cols=259 Identities=11% Similarity=0.007 Sum_probs=171.1
Q ss_pred eEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCe
Q psy14511 38 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK 116 (488)
Q Consensus 38 ~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~ 116 (488)
.|.+++|+|++..++..+ ++.++.|.-. ....+..+...+.+++|+|+++ +++++.. ++.|.+||..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~--~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITAE------PWLEISKKGLQLEGLNFDRQGQ-LFLLDVF--EGNIFKINPETKE 77 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEECE------EEEEEESSCCCEEEEEECTTSC-EEEEETT--TCEEEEECTTTCC
T ss_pred ccceeeecCCccceeEEeecccCcccccc------eeEEEeccCccccCcEECCCCC-EEEEECC--CCEEEEEeCCCCc
Confidence 477889999988887765 8888888321 2223444566778999999987 5554442 7889999886654
Q ss_pred eeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCcc
Q psy14511 117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSII 196 (488)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (488)
....
T Consensus 78 ~~~~---------------------------------------------------------------------------- 81 (333)
T 2dg1_A 78 IKRP---------------------------------------------------------------------------- 81 (333)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred EEEE----------------------------------------------------------------------------
Confidence 2110
Q ss_pred ccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC----CcEEEEECC
Q psy14511 197 NDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----EYIDLWHEQ 272 (488)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~~i~i~d~~ 272 (488)
... +...+.+++++|+++.+++. ..+ +.|.+||..
T Consensus 82 -------------------------------------~~~---~~~~~~~i~~~~dg~l~v~~-~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 82 -------------------------------------FVS---HKANPAAIKIHKDGRLFVCY-LGDFKSTGGIFAATEN 120 (333)
T ss_dssp -------------------------------------EEC---SSSSEEEEEECTTSCEEEEE-CTTSSSCCEEEEECTT
T ss_pred -------------------------------------eeC---CCCCcceEEECCCCcEEEEe-CCCCCCCceEEEEeCC
Confidence 000 34568899999999877766 555 689999988
Q ss_pred cceeeeeec--cccccEEEEEe--cCCEEEEeec------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEE
Q psy14511 273 EERLIQKLR--THMHQVIAMCW--NGNLLSCGTI------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS 342 (488)
Q Consensus 273 ~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 342 (488)
++.....+. .+...+..+.+ +++++++... .+.|..+|...+. ...+......+..++|+|+++.|+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT--VTPIIQNISVANGIALSTDEKVLWV 198 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC--EEEEEEEESSEEEEEECTTSSEEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE--EEEeecCCCcccceEECCCCCEEEE
Confidence 765443332 23456788888 5666665543 3556666665432 2222233344788999999987665
Q ss_pred Ee--cCeEEEEECCC-CCCCccc--------ce--ee--eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccc-
Q psy14511 343 GS--NNTVKIWDFRQ-LDAKRPL--------GL--IV--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE- 406 (488)
Q Consensus 343 ~~--d~~i~iwd~~~-~~~~~~~--------~~--~~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~- 406 (488)
+. ++.|.+||+.+ +.....+ .. .. .+++++|+.+++ ...++.|.+||. +++.+..+..+..
T Consensus 199 ~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~--~~~~~~v~~~d~-~g~~~~~~~~~~~~ 275 (333)
T 2dg1_A 199 TETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA--MYGQGRVLVFNK-RGYPIGQILIPGRD 275 (333)
T ss_dssp EEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE--EETTTEEEEECT-TSCEEEEEECTTGG
T ss_pred EeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEE--EcCCCEEEEECC-CCCEEEEEEcCCCc
Confidence 54 48999999964 2211110 00 11 278889987776 355789999998 5677777665433
Q ss_pred -----cEEEEEEcCCCCEEEEEeCCC
Q psy14511 407 -----RILSAVLSPDQTCVAAASADE 427 (488)
Q Consensus 407 -----~v~~~~~s~~~~~l~t~~~dg 427 (488)
.+.+++|+||++.|+.++.++
T Consensus 276 ~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 276 EGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp GTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred cccccCcceEEECCCCCEEEEEeCcc
Confidence 689999999987776665553
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=4.1e-14 Score=123.59 Aligned_cols=227 Identities=9% Similarity=0.099 Sum_probs=154.2
Q ss_pred cCCceEEEeecCCeEEEEEcccCcccceeec------ccCceEEEEEE-ccCCcEEEEec--CCeEEEEeccccCcCCCc
Q psy14511 3 WNGNLLSCGTIGGNILHYDVRTHSDYPTAIT------REGDVVCGLKW-SPNGRYLASGS--NNTVKIWDFRQLDAKRPQ 73 (488)
Q Consensus 3 ~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~------~h~~~V~~l~~-sp~g~~las~~--d~~i~vwd~~~~~~~~~~ 73 (488)
.+|+++++...++.|.+||.. ++.+ ..+. +|...+..+++ .++++++++.. ++.|.+||.. ++....+
T Consensus 39 ~~g~l~v~~~~~~~i~~~d~~-g~~~-~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~~~~~ 115 (286)
T 1q7f_A 39 AQNDIIVADTNNHRIQIFDKE-GRFK-FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQFVRKF 115 (286)
T ss_dssp TTCCEEEEEGGGTEEEEECTT-SCEE-EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCEEEEE
T ss_pred CCCCEEEEECCCCEEEEECCC-CcEE-EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcEEEEe
Confidence 378888888889999999987 3323 2221 34467899999 57888888774 8999999943 3322211
Q ss_pred ccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeec
Q psy14511 74 VNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153 (488)
Q Consensus 74 ~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (488)
...+...+..++++|+++ ++++... ++.|.+||.. ++....+
T Consensus 116 --~~~~~~~~~~i~~~~~g~-l~v~~~~--~~~i~~~~~~-g~~~~~~-------------------------------- 157 (286)
T 1q7f_A 116 --GATILQHPRGVTVDNKGR-IIVVECK--VMRVIIFDQN-GNVLHKF-------------------------------- 157 (286)
T ss_dssp --CTTTCSCEEEEEECTTSC-EEEEETT--TTEEEEECTT-SCEEEEE--------------------------------
T ss_pred --cCccCCCceEEEEeCCCC-EEEEECC--CCEEEEEcCC-CCEEEEe--------------------------------
Confidence 112445789999999997 4444432 7889999853 3321111
Q ss_pred cccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEE
Q psy14511 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~ 233 (488)
T Consensus 158 -------------------------------------------------------------------------------- 157 (286)
T 1q7f_A 158 -------------------------------------------------------------------------------- 157 (286)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--cccEEEEEe--cCCEEEEeecCC-eEEE
Q psy14511 234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--MHQVIAMCW--NGNLLSCGTIGG-NILH 308 (488)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~~~~~dg-~i~i 308 (488)
.... +...+..++++|+++.+++. ..++.|++||... +.+..+..+ ...+..+++ +++++++...++ .|.+
T Consensus 158 -~~~~-~~~~p~~i~~~~~g~l~v~~-~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~ 233 (286)
T 1q7f_A 158 -GCSK-HLEFPNGVVVNDKQEIFISD-NRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTI 233 (286)
T ss_dssp -ECTT-TCSSEEEEEECSSSEEEEEE-GGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEE
T ss_pred -CCCC-ccCCcEEEEECCCCCEEEEE-CCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEE
Confidence 0001 33457899999999866655 7789999999754 555555433 356788888 577888777775 9999
Q ss_pred EECcCCCccceeeecCC--ccEEEEEEccCCcEEEEEecCeEEEEECCCC
Q psy14511 309 YDVRTHSDYPTAITREG--DVVCGLKWSPNGRYLASGSNNTVKIWDFRQL 356 (488)
Q Consensus 309 ~d~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~ 356 (488)
||... .....+..+. ..+.+++++|+|+++++..++.|++|++...
T Consensus 234 ~~~~g--~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 234 FTQDG--QLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp ECTTS--CEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred ECCCC--CEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence 99653 3344444332 3478999999998877754799999998653
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=1.2e-14 Score=129.15 Aligned_cols=238 Identities=8% Similarity=-0.007 Sum_probs=166.9
Q ss_pred CCCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-
Q psy14511 207 GYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM- 284 (488)
Q Consensus 207 ~~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~- 284 (488)
.++.++++. .++.|.+||..+++....+. .......+++++++ .++++...++.|.+||..+++....+....
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~ 126 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDM 126 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTC
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCc
Confidence 345666665 57899999999999877664 34568899999988 566662478999999999988777665332
Q ss_pred ----ccEEEEEecCCEEEEee--cCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c----------Ce
Q psy14511 285 ----HQVIAMCWNGNLLSCGT--IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N----------NT 347 (488)
Q Consensus 285 ----~~v~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d----------~~ 347 (488)
.....+++++..++.+. .++.|.++|+.+.+ ....+.... ....++++|+|++++++. + +.
T Consensus 127 ~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~-~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 127 DMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDK-VVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp CTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTE-EEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred cccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCe-EEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCce
Confidence 13345556666666655 48899999998864 334443322 346789999999777765 3 68
Q ss_pred EEEEECCCCCCCcccce------eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEE--EeeccccEEEEEEcC-CCC
Q psy14511 348 VKIWDFRQLDAKRPLGL------IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEE--LKIHQERILSAVLSP-DQT 418 (488)
Q Consensus 348 i~iwd~~~~~~~~~~~~------~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~-~~~ 418 (488)
|.++|..+.+....+.. ...+++|+++.++++. +.|.+||..+++.... +..+......++++| +++
T Consensus 205 v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~----~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~ 280 (328)
T 3dsm_A 205 LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN----NDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGE 280 (328)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES----SSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCC
T ss_pred EEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc----cEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCe
Confidence 99999988765444332 1228999999998852 2899999988875421 222245688999999 555
Q ss_pred EEEEE----eCCCcEEEEecCCCCccccccccCCcceEEeec
Q psy14511 419 CVAAA----SADETISIWNCFPRDKKRKARQVGSGSSLEFAI 456 (488)
Q Consensus 419 ~l~t~----~~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~ 456 (488)
++++. ..++.|.+||.. ++.............++|..
T Consensus 281 lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~~ 321 (328)
T 3dsm_A 281 VYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWKL 321 (328)
T ss_dssp EEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEEC
T ss_pred EEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEec
Confidence 55665 578999999998 77665554444555566543
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=7.2e-14 Score=138.15 Aligned_cols=185 Identities=9% Similarity=0.008 Sum_probs=121.8
Q ss_pred eEEEEEcCCCCeEEEEeCCCCc----------------EEEEECCcce----eeeeeccccccEEEEEe--cCCEEEEee
Q psy14511 244 ISCVAWKPRTTDLAVTNTCTEY----------------IDLWHEQEER----LIQKLRTHMHQVIAMCW--NGNLLSCGT 301 (488)
Q Consensus 244 i~~~~~~~~~~~l~~~~~~~~~----------------i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~ 301 (488)
+..++|+|||+.|+.+ +.++. |++|++.+++ .+.....+...+..+.| ||++|+..+
T Consensus 173 ~~~~~wspDg~~l~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYN-AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp SCCEEECTTSSEEEEE-ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cceEEEEeCCCEEEEE-EECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 4568899999999988 55554 9999998765 22222334555667777 788888776
Q ss_pred c-----CCeEEEEECcC------CCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeec
Q psy14511 302 I-----GGNILHYDVRT------HSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLK 370 (488)
Q Consensus 302 ~-----dg~i~i~d~~~------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 370 (488)
. +..|++||+.+ +......+..+...+.. .|+|+|+.|+..++.
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~------------------------ 306 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNR------------------------ 306 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECT------------------------
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECC------------------------
Confidence 5 56899999986 43235555555555544 478888877766420
Q ss_pred CCCCEEEEEccCCCCeEEEEeCCCcc--eeEEEeeccc--cEEEEEEcCCCCEEEEEeCCCc--EEEEecCCCCcc-ccc
Q psy14511 371 REGRELVTSHGKQDCSLKMWEYPRLH--LIEELKIHQE--RILSAVLSPDQTCVAAASADET--ISIWNCFPRDKK-RKA 443 (488)
Q Consensus 371 ~~~~~l~~~~g~~~~~i~i~d~~~~~--~~~~~~~~~~--~v~~~~~s~~~~~l~t~~~dg~--v~iw~~~~~~~~-~~~ 443 (488)
+...+.|.+||+.+++ ....+..|.. .+..++|++++.++++...|+. |++|++.+++.. ...
T Consensus 307 ----------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 307 ----------HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp ----------TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred ----------CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence 1123455566655543 2344444533 6888999988888889988885 566777566643 333
Q ss_pred cccCCcceEEeecCCCceEEE
Q psy14511 444 RQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 444 ~~~~~v~~~~~s~~~~~~~~~ 464 (488)
.+.+.+..+.++|++..+.+.
T Consensus 377 ~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 377 LEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp CCSSEEEEEECCTTCSEEEEE
T ss_pred CCCceEEEEecCCCCCEEEEE
Confidence 345667888899988766543
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.67 E-value=9.6e-13 Score=115.67 Aligned_cols=268 Identities=11% Similarity=0.022 Sum_probs=171.1
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA 82 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~ 82 (488)
+|+++++...++.|.+||.. ++........+...+.+++++++|++.++.. ++.|..||.. ++ ...+ .+......
T Consensus 25 ~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~-~~~~~~~~ 100 (299)
T 2z2n_A 25 KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEY-TLPNPDSA 100 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEE-ECSSTTCC
T ss_pred CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEE-eCCCcCCC
Confidence 67877766667899999988 4422222233456799999999999888876 7899999975 22 1111 12223457
Q ss_pred eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511 83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS 162 (488)
Q Consensus 83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (488)
+..+++.+++..+++... ++.|..||. +++...
T Consensus 101 ~~~i~~~~~g~l~v~~~~---~~~i~~~d~-~g~~~~------------------------------------------- 133 (299)
T 2z2n_A 101 PYGITEGPNGDIWFTEMN---GNRIGRITD-DGKIRE------------------------------------------- 133 (299)
T ss_dssp EEEEEECTTSCEEEEETT---TTEEEEECT-TCCEEE-------------------------------------------
T ss_pred ceeeEECCCCCEEEEecC---CceEEEECC-CCCEEE-------------------------------------------
Confidence 889999998865444433 678888886 443210
Q ss_pred cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511 163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA 242 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~ 242 (488)
+..+. ...
T Consensus 134 -----------------------------------------------------------------------~~~~~-~~~ 141 (299)
T 2z2n_A 134 -----------------------------------------------------------------------YELPN-KGS 141 (299)
T ss_dssp -----------------------------------------------------------------------EECSS-TTC
T ss_pred -----------------------------------------------------------------------ecCCC-CCC
Confidence 00011 234
Q ss_pred ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee-eccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK-LRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT 319 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~ 319 (488)
.+..+++.++++..++. ..++.|..||. +++.... .......+..+++ ++++.++...++.|.+||. ++.....
T Consensus 142 ~~~~i~~~~~g~l~v~~-~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTE-NQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEF 218 (299)
T ss_dssp CEEEEEECTTSCEEEEE-TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred CCceEEEcCCCCEEEEe-CCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEE
Confidence 57889999998766666 67789999998 5544332 3334456778888 4676666666889999998 5432222
Q ss_pred eeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCccee
Q psy14511 320 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI 398 (488)
Q Consensus 320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~ 398 (488)
....+...+.+++++++|+++++.. ++.|..||.. + .+..+.+
T Consensus 219 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g-----------------------------~~~~~~~------ 262 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-N-----------------------------IIEEYPI------ 262 (299)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-T-----------------------------EEEEEEC------
T ss_pred ECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-C-----------------------------ceEEEeC------
Confidence 2233446688999999998666654 4777777752 1 1222221
Q ss_pred EEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511 399 EELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 399 ~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
..+...+.++++ ++++++++.+ .+.+..++..+++
T Consensus 263 ---~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 263 ---QIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp ---SSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred ---CCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 123356888999 8888777665 5667777776543
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.67 E-value=1.3e-12 Score=117.63 Aligned_cols=221 Identities=11% Similarity=0.005 Sum_probs=149.5
Q ss_pred CCeEEEEECCCCceEEEEecCCC-C---CCceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeee-eccccccEEEE
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTY-D---NAYISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQK-LRTHMHQVIAM 290 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~-~---~~~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~-~~~~~~~v~~~ 290 (488)
++.|.+||..+.+....+...+. . ......++++|||++|+++... ++.|.++| .+++.+.. +... ..+...
T Consensus 96 ~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~~~~~ 173 (373)
T 2mad_H 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TCYHIH 173 (373)
T ss_pred CCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ceEEEE
Confidence 67899999998887776665310 1 1235589999999999998333 57899999 99888777 6432 222222
Q ss_pred EecCCEEEEeecCCeEEEEECcCCCccceeee-----cCCcc-EEEEEEccCCcEEEEEe-cCeEEEEECCCCCCC--cc
Q psy14511 291 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT-----REGDV-VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAK--RP 361 (488)
Q Consensus 291 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~-i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~--~~ 361 (488)
....+.+++.+.||.+.++|. +++.. .... ....+ .....+.+++..++..+ .+.+.+.|+...... ..
T Consensus 174 ~~~~~~~~~~~~dg~~~~vd~-~g~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~ 251 (373)
T 2mad_H 174 PGAPSTFYLLCAQGGLAKTDH-AGGAA-GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAP 251 (373)
T ss_pred eCCCceEEEEcCCCCEEEEEC-CCcEE-EEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeee
Confidence 224566777888999999999 65432 1111 11122 23355677665544444 588999998654211 11
Q ss_pred cc---------------eeeeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC
Q psy14511 362 LG---------------LIVPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT 418 (488)
Q Consensus 362 ~~---------------~~~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~ 418 (488)
+. .....++|+++.++++... ..+.|.++|..+++.+.++.. ......++|+|||+
T Consensus 252 ~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~ 330 (373)
T 2mad_H 252 IDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGG 330 (373)
T ss_pred eeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCC
Confidence 10 1113678898888875321 246899999999999988853 33589999999999
Q ss_pred -EEEEEe-CCCcEEEEecCCCCcccc
Q psy14511 419 -CVAAAS-ADETISIWNCFPRDKKRK 442 (488)
Q Consensus 419 -~l~t~~-~dg~v~iw~~~~~~~~~~ 442 (488)
+++++. .++.|.++|+.+++....
T Consensus 331 ~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 331 PDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEEcCCCCeEEEEECCCCCEEee
Confidence 777776 589999999999988755
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.67 E-value=2.5e-13 Score=120.28 Aligned_cols=272 Identities=11% Similarity=-0.048 Sum_probs=167.2
Q ss_pred cCCceEEEeec-----CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccc
Q psy14511 3 WNGNLLSCGTI-----GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQ 66 (488)
Q Consensus 3 ~dg~~la~g~~-----dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~ 66 (488)
+|++.+.+... ++.|.+.|..+.+.+..+-.+. .+ . +++||||++|..+. ++.|.+||..+
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~-~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF-LP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS-SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC-CC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 47877776654 6899999999988654443333 34 4 99999999876653 57899999998
Q ss_pred cCcCCCcccccc----cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccce
Q psy14511 67 LDAKRPQVNNQC----HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRR 142 (488)
Q Consensus 67 ~~~~~~~~~~~~----h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (488)
.+....+....+ .......+.|+|||++++++... .++.|.++|+.+++.+.++..... ..+
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-~~~~VsVID~~t~~vv~tI~v~g~----~~~--------- 184 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-PAPAVGVVDLEGKAFKRMLDVPDC----YHI--------- 184 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-SSCEEEEEETTTTEEEEEEECCSE----EEE---------
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-CCCeEEEEECCCCcEEEEEECCCc----cee---------
Confidence 654433321110 11245679999999998887631 168999999999998877754310 000
Q ss_pred eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEE
Q psy14511 143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYT 222 (488)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 222 (488)
.......+++.+.||++.+
T Consensus 185 -------------------------------------------------------------~P~g~~~~~~~~~DG~~~~ 203 (386)
T 3sjl_D 185 -------------------------------------------------------------FPTAPDTFFMHCRDGSLAK 203 (386)
T ss_dssp -------------------------------------------------------------EEEETTEEEEEETTSCEEE
T ss_pred -------------------------------------------------------------ecCCCceeEEECCCCCEEE
Confidence 0111245678888999999
Q ss_pred EECCC-CceEEEEe-cCCCCCCceE-EEEEc-CCCCeEEEEeCCCCcEEEEECCcce--eeeeec------------ccc
Q psy14511 223 WNTKT-NKTQLLVE-YPTYDNAYIS-CVAWK-PRTTDLAVTNTCTEYIDLWHEQEER--LIQKLR------------THM 284 (488)
Q Consensus 223 w~~~~-~~~~~~~~-~~~~~~~~i~-~~~~~-~~~~~l~~~~~~~~~i~i~d~~~~~--~~~~~~------------~~~ 284 (488)
.++.+ ++...... .......++. ...|. ++|+.+++ +.+|.|.+.|+.+.. ....+. ...
T Consensus 204 v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~v--s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g 281 (386)
T 3sjl_D 204 VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWP--TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG 281 (386)
T ss_dssp EECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEE--BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS
T ss_pred EECCCCCeEEEeecceeccccccccccceeEcCCCcEEEE--eCCCEEEEEECCCCcceeecceeccccccccccccCCC
Confidence 99876 55432221 1000122222 23554 67755554 468999999987643 333222 111
Q ss_pred ccEEEEEecCCEEEEeec----------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCc-EEEEEe--cCeEEEE
Q psy14511 285 HQVIAMCWNGNLLSCGTI----------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR-YLASGS--NNTVKIW 351 (488)
Q Consensus 285 ~~v~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~--d~~i~iw 351 (488)
....++..+++.++.... .+.|.++|+.+.+.......++ .+++++++||++ +|+++. ++.|.++
T Consensus 282 ~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsVi 359 (386)
T 3sjl_D 282 WQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIH 359 (386)
T ss_dssp SSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEE
T ss_pred cceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEE
Confidence 123444446666666542 2579999998865333333332 577899999986 666653 2555555
Q ss_pred ECCCC
Q psy14511 352 DFRQL 356 (488)
Q Consensus 352 d~~~~ 356 (488)
|..++
T Consensus 360 D~~t~ 364 (386)
T 3sjl_D 360 DAESG 364 (386)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 55443
No 193
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.65 E-value=5.9e-13 Score=120.23 Aligned_cols=238 Identities=13% Similarity=0.103 Sum_probs=163.8
Q ss_pred CCCeEEEEECCCCceEEEEecCCCC----CCceEEEEEcCCCCeEEEEeCC-CCcEEEEECCcceeeeeeccccccEEEE
Q psy14511 216 LDTSVYTWNTKTNKTQLLVEYPTYD----NAYISCVAWKPRTTDLAVTNTC-TEYIDLWHEQEERLIQKLRTHMHQVIAM 290 (488)
Q Consensus 216 ~d~~v~iw~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~v~~~ 290 (488)
.++.|.++|..+.+....+.+.+.. ......++++|||++++++... ++.|.+.|+.+.+.+..+..... ..+
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~ 224 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHI 224 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEE
T ss_pred CCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eee
Confidence 3678999999999988877764101 1235578999999999998333 67899999999998888764222 233
Q ss_pred Ee-cCCEEEEeecCCeEEEEECcCCCccce----eeecCCccE-EEEEEccCCcEEEEEec-CeEEEEECCCCCCC--cc
Q psy14511 291 CW-NGNLLSCGTIGGNILHYDVRTHSDYPT----AITREGDVV-CGLKWSPNGRYLASGSN-NTVKIWDFRQLDAK--RP 361 (488)
Q Consensus 291 ~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~i-~~~~~s~~~~~l~~~~d-~~i~iwd~~~~~~~--~~ 361 (488)
.. ..+.+++.+.||.+.+.+...++ ... .+.....++ ..+.+++++..++..+. +.+.+.|+...... ..
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~~~~~-v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~ 303 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDFADGE-TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAP 303 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEECCTTC-CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCC
T ss_pred ccCCCcEEEEEcCCCCEEEEECCCCc-EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeee
Confidence 33 34677778889988888884432 221 111111111 23567899888777774 99999998643210 10
Q ss_pred cc---------------eeeeeecCCCCEEEEEccC--------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC
Q psy14511 362 LG---------------LIVPKLKREGRELVTSHGK--------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT 418 (488)
Q Consensus 362 ~~---------------~~~~~~~~~~~~l~~~~g~--------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~ 418 (488)
+. .....++|+++.++++... ..+.|.++|..+.+.+.++.... ....++|+||++
T Consensus 304 ~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~ 382 (426)
T 3c75_H 304 IEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAE 382 (426)
T ss_dssp EESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSS
T ss_pred eeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCC
Confidence 00 0013789999988875321 23579999999999999886433 488999999999
Q ss_pred -EEEEEe-CCCcEEEEecCCCCccccccccCCcceEEeecC
Q psy14511 419 -CVAAAS-ADETISIWNCFPRDKKRKARQVGSGSSLEFAIL 457 (488)
Q Consensus 419 -~l~t~~-~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~ 457 (488)
+++++. .++.|.++|+.+++........+.-..+..+||
T Consensus 383 ~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~ 423 (426)
T 3c75_H 383 PLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD 423 (426)
T ss_dssp CEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred EEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence 888887 589999999999998866433344444666664
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=3.8e-13 Score=117.99 Aligned_cols=241 Identities=9% Similarity=-0.005 Sum_probs=155.3
Q ss_pred eeecccCceEEEEEEccCCc-EEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511 30 TAITREGDVVCGLKWSPNGR-YLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV 107 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~g~-~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i 107 (488)
..+..+.....+++|+|+|+ +++++. ++.|..||..++ ...+..+...+.+++++|+|+.+++... ++.|
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~dg~l~v~~~~---~~~i 92 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNKQGHLIACSHG---LRRL 92 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECTTCCEEEEETT---TTEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECCCCcEEEEecC---CCeE
Confidence 44555666788999999998 666666 899999998864 2223446678999999999975544433 7899
Q ss_pred EEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCc
Q psy14511 108 RLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPE 187 (488)
Q Consensus 108 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
.+||..+++.............
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~---------------------------------------------------------- 114 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKL---------------------------------------------------------- 114 (296)
T ss_dssp EEECSTTCCEEEEECEETTEEC----------------------------------------------------------
T ss_pred EEEcCCCCcEEEEeeccCCCCC----------------------------------------------------------
Confidence 9999977764332211100000
Q ss_pred eeecCCCccccceeeeeeeC-CCcEEEEE------------------CCCeEEEEECCCCceEEEEecCCCCCCceEEEE
Q psy14511 188 RILEAPSIINDFYTSGLDWG-YHDTLAVA------------------LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA 248 (488)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~ 248 (488)
.....+.++ .+.++++. ..+.|..++.. ++...... .......++
T Consensus 115 -----------~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~----~~~~~~gi~ 178 (296)
T 3e5z_A 115 -----------NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR----DRVKPNGLA 178 (296)
T ss_dssp -----------CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC----CCSSEEEEE
T ss_pred -----------CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec----CCCCCccEE
Confidence 000011111 13344421 13466666665 44333322 455678999
Q ss_pred EcCCCCeEEEEeCCCCcEEEEECC-ccee---eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeee
Q psy14511 249 WKPRTTDLAVTNTCTEYIDLWHEQ-EERL---IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAIT 322 (488)
Q Consensus 249 ~~~~~~~l~~~~~~~~~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 322 (488)
|+|+++.+++. +.++.|.+|++. .++. ...+..+...+..+++ +|+++++. ++.|.+||... .....+.
T Consensus 179 ~s~dg~~lv~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g--~~~~~~~ 253 (296)
T 3e5z_A 179 FLPSGNLLVSD-TGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDG--DELGRVL 253 (296)
T ss_dssp ECTTSCEEEEE-TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTS--CEEEEEE
T ss_pred ECCCCCEEEEe-CCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCC--CEEEEEE
Confidence 99999999544 788999999986 3333 2233233444556777 57665555 88899999863 3555666
Q ss_pred cCCccEEEEEE-ccCCcEEEEEecCeEEEEECCCCCC
Q psy14511 323 REGDVVCGLKW-SPNGRYLASGSNNTVKIWDFRQLDA 358 (488)
Q Consensus 323 ~~~~~i~~~~~-s~~~~~l~~~~d~~i~iwd~~~~~~ 358 (488)
.+.. +.+++| +|+++.|++++.+.+..++.++...
T Consensus 254 ~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 254 TPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGL 289 (296)
T ss_dssp CSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCBC
T ss_pred CCCC-ceeEEEECCCCCEEEEEcCCeEEEEEcccccc
Confidence 6666 888999 5899999888877777777776544
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=2e-14 Score=141.69 Aligned_cols=232 Identities=8% Similarity=-0.071 Sum_probs=149.1
Q ss_pred ccCCceEE-----EeecCCeEEEEEcccCccc-ceeecccCceEEEEEEccCCcEEEEec-CCe-------------EEE
Q psy14511 2 CWNGNLLS-----CGTIGGNILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGS-NNT-------------VKI 61 (488)
Q Consensus 2 ~~dg~~la-----~g~~dg~i~iwd~~~~~~~-~~~~~~h~~~V~~l~~sp~g~~las~~-d~~-------------i~v 61 (488)
+.||++|| .|+.+..|++||+.+++.+ ...+.... ...++|+|||+.|+.++ |.. |++
T Consensus 129 SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~--~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~ 206 (695)
T 2bkl_A 129 SWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGK--YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRY 206 (695)
T ss_dssp CTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCT--TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccc--ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEE
Confidence 45999999 4455678999999998754 22222221 26789999999999887 554 999
Q ss_pred EeccccCcC-CCcccccccccceeEEEEecCCCeEEeeeCCcccc----eEEEEecCCCeeeeeeecCCCcccccccccc
Q psy14511 62 WDFRQLDAK-RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ----TVRLWNSMNGKEKCHVKTDSQQANDETISYR 136 (488)
Q Consensus 62 wd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (488)
|++.++... ..+.....|...+..+.|+|||++|+++.. ++ .|.+|+..+++.
T Consensus 207 ~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~---~~~~~~~l~~~~~~~~~~------------------- 264 (695)
T 2bkl_A 207 HTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYIL---RGWSENDVYWKRPGEKDF------------------- 264 (695)
T ss_dssp EETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEE---ETTTEEEEEEECTTCSSC-------------------
T ss_pred EECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEe---CCCCceEEEEEcCCCCce-------------------
Confidence 999876532 233334456667899999999999888776 43 455554322221
Q ss_pred ccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEEC
Q psy14511 137 EQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL 216 (488)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (488)
T Consensus 265 -------------------------------------------------------------------------------- 264 (695)
T 2bkl_A 265 -------------------------------------------------------------------------------- 264 (695)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeC---CCCcEEEEECCccee---eeeeccc-cccEEE
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNT---CTEYIDLWHEQEERL---IQKLRTH-MHQVIA 289 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---~~~~i~i~d~~~~~~---~~~~~~~-~~~v~~ 289 (488)
..+.. +...+....+ ++++ +++... .++.|.+||+.++.. ...+..+ ...+..
T Consensus 265 --------------~~l~~----~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~ 324 (695)
T 2bkl_A 265 --------------RLLVK----GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLS 324 (695)
T ss_dssp --------------EEEEE----CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE
T ss_pred --------------EEeec----CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE
Confidence 11111 2223334445 5555 554424 357899999877642 2233333 445777
Q ss_pred EEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC-CccEEEEEEccCCcEEEEEe----c-CeEEEEECCCCC
Q psy14511 290 MCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGS----N-NTVKIWDFRQLD 357 (488)
Q Consensus 290 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~----d-~~i~iwd~~~~~ 357 (488)
+++ ++.++++...|+..++|.+.........+..+ ...+..++++|+++.++... . +++++||+.+++
T Consensus 325 ~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 325 VSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 777 56778888889988888665322233444433 56677888999997666332 2 789999998764
No 196
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=1.1e-12 Score=115.06 Aligned_cols=189 Identities=11% Similarity=0.073 Sum_probs=127.7
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc----cccEEEEEe--cCCEEEE----eec-------
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH----MHQVIAMCW--NGNLLSC----GTI------- 302 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~----~~~------- 302 (488)
+...+.+++++|+|+.+++. ..++.|.+||..+++........ ...+..+++ +|+++++ |+.
T Consensus 67 ~~~~~~~l~~~~dg~l~v~~-~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 67 PSHHQNGHCLNKQGHLIACS-HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp SCSSEEEEEECTTCCEEEEE-TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSC
T ss_pred CCCCcceeeECCCCcEEEEe-cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccc
Confidence 33457899999999877666 66789999998776654333221 123445666 6777776 331
Q ss_pred ------CCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECC-CCCC---Ccccc---e--ee
Q psy14511 303 ------GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR-QLDA---KRPLG---L--IV 366 (488)
Q Consensus 303 ------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~-~~~~---~~~~~---~--~~ 366 (488)
.+.|..++.. + ....+..+......++|+|+++.+++.+ ++.|.+|++. ++.. ...+. . ..
T Consensus 146 ~~~~~~~~~l~~~~~~-g--~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~ 222 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPD-G--TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG 222 (296)
T ss_dssp CCCCSSSCEEEEECTT-S--CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred ccccCCCcEEEEECCC-C--CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Confidence 3456666654 2 2334455566678999999999985555 4899999987 3322 11110 0 01
Q ss_pred eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEE-cCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511 367 PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVL-SPDQTCVAAASADETISIWNCFPRDK 439 (488)
Q Consensus 367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~t~~~dg~v~iw~~~~~~~ 439 (488)
.+++++|+..++ . ++.|.+||.. ++.+..+..+.. +++++| +|+++.|+.++.++ +.-++..+.+.
T Consensus 223 i~~d~~G~l~v~--~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 223 LRVDAGGLIWAS--A--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp EEEBTTSCEEEE--E--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred EEECCCCCEEEE--c--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 288899987666 2 7889999986 788888887777 999999 58999998888764 44445554443
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=4e-12 Score=114.43 Aligned_cols=272 Identities=10% Similarity=-0.035 Sum_probs=158.3
Q ss_pred cCCceEEEeec--CC---eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccc
Q psy14511 3 WNGNLLSCGTI--GG---NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQ 66 (488)
Q Consensus 3 ~dg~~la~g~~--dg---~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~ 66 (488)
.|++++.+... .+ .|.++|..+++.+ ..+.....+ .+++||||++|+.+. ++.|.+||..+
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~-~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSIL-GHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEE-EEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 46776666543 22 8899999988854 334333333 899999999988874 46799999987
Q ss_pred cCcCCCcccc-cc---cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeee-eecCCCccccccccccccccc
Q psy14511 67 LDAKRPQVNN-QC---HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH-VKTDSQQANDETISYREQKKR 141 (488)
Q Consensus 67 ~~~~~~~~~~-~~---h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 141 (488)
.+....+... .. +......+.|+|||++|+++... .++.|.++| .+++.+.. +...
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~-~~~~v~viD-~t~~~~~~~i~~~----------------- 167 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA-AGPAVGLVV-QGGSSDDQLLSSP----------------- 167 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC-CCCeEEEEE-CCCCEEeEEcCCC-----------------
Confidence 5443322211 00 01234588999999998887641 147788898 87765433 2111
Q ss_pred eeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEE
Q psy14511 142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVY 221 (488)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 221 (488)
T Consensus 168 -------------------------------------------------------------------------------- 167 (373)
T 2mad_H 168 -------------------------------------------------------------------------------- 167 (373)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-----cccccE-EEEEe--c
Q psy14511 222 TWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-----THMHQV-IAMCW--N 293 (488)
Q Consensus 222 iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-----~~~~~v-~~~~~--~ 293 (488)
. ++.+.|+++..++..+.||.+.++|. +++...... ....++ ....+ +
T Consensus 168 --------------------~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 168 --------------------T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred --------------------c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 0 12222333222222244555555555 443332111 111111 11111 3
Q ss_pred CCEEEEeecCCeEEEEECcCCCc-cceeeec----------CCccEEEEEEccCCcEEEEEec-----------CeEEEE
Q psy14511 294 GNLLSCGTIGGNILHYDVRTHSD-YPTAITR----------EGDVVCGLKWSPNGRYLASGSN-----------NTVKIW 351 (488)
Q Consensus 294 ~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~----------~~~~i~~~~~s~~~~~l~~~~d-----------~~i~iw 351 (488)
+..++..+..+.+.+.|+..... ....+.. .......++++|+++.+.+..+ +.|.++
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 33333333567788888764321 1111110 1122445789999988777542 479999
Q ss_pred ECCCCCCCccccee----eeeecCCCC-EEEEEccCCCCeEEEEeCCCcceeEEE
Q psy14511 352 DFRQLDAKRPLGLI----VPKLKREGR-ELVTSHGKQDCSLKMWEYPRLHLIEEL 401 (488)
Q Consensus 352 d~~~~~~~~~~~~~----~~~~~~~~~-~l~~~~g~~~~~i~i~d~~~~~~~~~~ 401 (488)
|..+.+....+... ...|+|||+ .++++ ...++.|.++|+.+++.+.++
T Consensus 304 D~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~-~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 304 TGLVGQTSSQISLGHDVDAISVAQDGGPDLYAL-SAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ECCCCEEEEEEECCCCcCeEEECCCCCeEEEEE-cCCCCeEEEEECCCCCEEeee
Confidence 99988665544322 229999999 55553 446899999999999988774
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=1.5e-11 Score=107.96 Aligned_cols=262 Identities=7% Similarity=-0.034 Sum_probs=168.6
Q ss_pred ccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEec
Q psy14511 34 REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNS 112 (488)
Q Consensus 34 ~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~ 112 (488)
.+...+.+++++++|++.++.. ++.|.+||.. ++.. .. ....+...+.++++.+++..+++... ++.|..|+.
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~-~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~ 85 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EY-PLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITK 85 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EE-ECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-Ee-cCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECC
Confidence 3445789999999999888776 7899999987 3321 11 11224467899999999875555443 678888886
Q ss_pred CCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecC
Q psy14511 113 MNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEA 192 (488)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (488)
. ++. ..
T Consensus 86 ~-g~~-~~------------------------------------------------------------------------ 91 (299)
T 2z2n_A 86 K-GII-KE------------------------------------------------------------------------ 91 (299)
T ss_dssp T-SCE-EE------------------------------------------------------------------------
T ss_pred C-CcE-EE------------------------------------------------------------------------
Confidence 4 221 00
Q ss_pred CCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511 193 PSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ 272 (488)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~ 272 (488)
+..+. ....+..+++.++++..++. ..++.|..||.
T Consensus 92 -----------------------------------------~~~~~-~~~~~~~i~~~~~g~l~v~~-~~~~~i~~~d~- 127 (299)
T 2z2n_A 92 -----------------------------------------YTLPN-PDSAPYGITEGPNGDIWFTE-MNGNRIGRITD- 127 (299)
T ss_dssp -----------------------------------------EECSS-TTCCEEEEEECTTSCEEEEE-TTTTEEEEECT-
T ss_pred -----------------------------------------EeCCC-cCCCceeeEECCCCCEEEEe-cCCceEEEECC-
Confidence 00011 23457889999998777666 67889999998
Q ss_pred cceeee-eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeE
Q psy14511 273 EERLIQ-KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 348 (488)
Q Consensus 273 ~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i 348 (488)
+++... ........+..+++ ++++.++...++.|..||. ++.............+..++++++|+++++.. ++.|
T Consensus 128 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 206 (299)
T 2z2n_A 128 DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKI 206 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceE
Confidence 443332 22334456788888 4667666666789999998 44322111233345678899999988666654 3677
Q ss_pred EEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc
Q psy14511 349 KIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET 428 (488)
Q Consensus 349 ~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~ 428 (488)
.+||. ++ .+..+. +..+...+.+++++++|+++++...++.
T Consensus 207 ~~~~~-~g-----------------------------~~~~~~---------~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 247 (299)
T 2z2n_A 207 GRITT-SG-----------------------------EITEFK---------IPTPNARPHAITAGAGIDLWFTEWGANK 247 (299)
T ss_dssp EEECT-TC-----------------------------CEEEEE---------CSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred EEECC-CC-----------------------------cEEEEE---------CCCCCCCceeEEECCCCCEEEeccCCce
Confidence 77765 22 011111 1223456889999999997777767889
Q ss_pred EEEEecCCCCcccc--ccccCCcceEEeecCCCce
Q psy14511 429 ISIWNCFPRDKKRK--ARQVGSGSSLEFAILKQPV 461 (488)
Q Consensus 429 v~iw~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~ 461 (488)
|..||. +++.... ......+.++++ +++..+
T Consensus 248 i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~ 280 (299)
T 2z2n_A 248 IGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIW 280 (299)
T ss_dssp EEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEE
T ss_pred EEEECC-CCceEEEeCCCCCCccceEEe-cCCCEE
Confidence 999998 3433221 233456778888 766554
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=1.3e-12 Score=112.52 Aligned_cols=217 Identities=12% Similarity=0.024 Sum_probs=144.5
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccC-ceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccc-cc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCH-LS 81 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~-~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h-~~ 81 (488)
.+++|++++.++.|.+||.++++.+ ..+..+. ..+.+++++|+|++|+ +.++.|..||. +++.... +..+ ..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~-w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~---~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIV-WEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWN---IAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEE-EEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEE---EECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEE-EEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEE---EcCCCCc
Confidence 5789999999999999999898865 4444444 4688999999999999 44788999998 5543332 3322 34
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
.+.++.+.++|+.+++.+.. ++.+..+|. +|+.+..+...........
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~--~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~----------------------------- 125 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGH--PSTILEVNM-KGEVLSKTEFETGIERPHA----------------------------- 125 (276)
T ss_dssp EEEEEEECTTSCEEEEEEST--TEEEEEECT-TSCEEEEEEECCSCSSGGG-----------------------------
T ss_pred cccccEECCCCCEEEEecCC--CCEEEEEeC-CCCEEEEEeccCCCCcccc-----------------------------
Confidence 68889999999887776542 567777775 6776665543211000000
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN 241 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 241 (488)
.........+++.+++...++.|..||.+ ++.+..+...
T Consensus 126 ------------------------------------~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~---- 164 (276)
T 3no2_A 126 ------------------------------------QFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS---- 164 (276)
T ss_dssp ------------------------------------SCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS----
T ss_pred ------------------------------------cccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC----
Confidence 00000011122344555578999999998 8877766643
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc------cEEEEEe--cCCEEEEe
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH------QVIAMCW--NGNLLSCG 300 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~--~~~~l~~~ 300 (488)
..+.++...++++.++++ ..++.|..+|..+++.+.++..+.. .+..+.. +|+.+++.
T Consensus 165 ~~~~~~~~~~~g~~~v~~-~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 165 GTPFSSAFLDNGDCLVAC-GDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SCCCEEEECTTSCEEEEC-BTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCccceeEcCCCCEEEEe-CCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 345567888999888887 7788999999998999888864321 1444444 45555554
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=1.8e-12 Score=111.61 Aligned_cols=206 Identities=10% Similarity=0.013 Sum_probs=151.7
Q ss_pred CCcEE-EEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc-c
Q psy14511 208 YHDTL-AVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-H 285 (488)
Q Consensus 208 ~~~~~-~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-~ 285 (488)
+++++ +++.++.|++||.++++.+..+... ....+.+++++|+|+.++ + .++.|..||. +++.+..+..+. .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE--KGWECNSVAATKAGEILF-S--YSKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECC--TTCCCCEEEECTTSCEEE-E--CBSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCC--ccCCCcCeEECCCCCEEE-e--CCCCEEEECC-CCCEEEEEcCCCCc
Confidence 34444 4458999999999999987776642 114688999999998877 4 3678999998 788888887643 4
Q ss_pred cEEEEEe--cCCEEEEeec-CCeEEEEECcCCCccceeee------cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511 286 QVIAMCW--NGNLLSCGTI-GGNILHYDVRTHSDYPTAIT------REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ 355 (488)
Q Consensus 286 ~v~~~~~--~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~ 355 (488)
.+.++.+ +|+.+++.+. ++.+..+|.. ++ .+..+. .+......+++.++|+++++.. ++.|..||.+
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk-~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMK-GE-VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTT-SC-EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCC-CC-EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 6666666 7899998877 7778777763 32 322222 1112345567899999999888 4999999988
Q ss_pred CCCCcccce----eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc------ccEEEEEEcCCCCEEEEEe
Q psy14511 356 LDAKRPLGL----IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ------ERILSAVLSPDQTCVAAAS 424 (488)
Q Consensus 356 ~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~t~~ 424 (488)
++....+.. ......++|+.+++ +..++.|..+|..+|+.+.++..+. ..+..++..++|..+++..
T Consensus 155 G~~~w~~~~~~~~~~~~~~~~g~~~v~--~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 GQLLNSVKLSGTPFSSAFLDNGDCLVA--CGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEEEECSSCCCEEEECTTSCEEEE--CBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECCCCccceeEcCCCCEEEE--eCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 755433322 12367789999988 6677899999999999999887543 2378899999999888874
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.58 E-value=1.1e-12 Score=113.35 Aligned_cols=230 Identities=10% Similarity=-0.026 Sum_probs=148.5
Q ss_pred cCCceEE-EeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc
Q psy14511 3 WNGNLLS-CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS 81 (488)
Q Consensus 3 ~dg~~la-~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~ 81 (488)
.+|++++ +...++.|.+||..+.... .....+...+.+++++++|+++++..++.|.+||..+.... .+ ......
T Consensus 33 ~~g~l~v~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~--~~~~~~ 108 (270)
T 1rwi_B 33 SAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT-VL--PFDGLN 108 (270)
T ss_dssp TTCCEEEEECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE-EC--CCCSCS
T ss_pred CCCCEEEEccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe-ee--ecCCcC
Confidence 3788777 5567889999997665422 22223335678899999999766655889999998753211 11 112235
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
.+..+++.++++.+++... ++.|.+|+..+......
T Consensus 109 ~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~----------------------------------------- 144 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQTVL----------------------------------------- 144 (270)
T ss_dssp SEEEEEECTTCCEEEEEGG---GTEEEEECTTCCSCEEC-----------------------------------------
T ss_pred CCcceEECCCCCEEEEECC---CCEEEEEECCCceeEee-----------------------------------------
Confidence 6889999999874444333 77888886433221000
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN 241 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 241 (488)
. .. ..
T Consensus 145 -------------------------------------------------------------------------~-~~-~~ 149 (270)
T 1rwi_B 145 -------------------------------------------------------------------------P-FT-GL 149 (270)
T ss_dssp -------------------------------------------------------------------------C-CC-SC
T ss_pred -------------------------------------------------------------------------c-cc-cC
Confidence 0 00 22
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT 319 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~ 319 (488)
..+.+++++++++.+++. ..++.|.+||............+...+..+++ +|+++++...++.|.+||..... ...
T Consensus 150 ~~p~~i~~~~~g~l~v~~-~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~-~~~ 227 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTD-TDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-STV 227 (270)
T ss_dssp CSCCCEEECTTCCEEEEE-GGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC-CEE
T ss_pred CCceeEEEeCCCCEEEEE-CCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc-cee
Confidence 245678899999855555 66789999998876544433333356778888 46666666678899999987532 222
Q ss_pred eeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC
Q psy14511 320 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD 357 (488)
Q Consensus 320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~ 357 (488)
....+...+.+++++|+|+++++.. ++.|+++++...+
T Consensus 228 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 228 LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 2222335688999999998777766 5999999987653
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.58 E-value=1.6e-12 Score=112.35 Aligned_cols=233 Identities=9% Similarity=-0.005 Sum_probs=152.9
Q ss_pred eeeeeeeCC-CcEEE-E-ECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee
Q psy14511 200 YTSGLDWGY-HDTLA-V-ALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL 276 (488)
Q Consensus 200 ~~~~~~~~~-~~~~~-~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~ 276 (488)
....+.+++ +.+++ + ..++.|.+|+..+..... ... . ....+.+++++++++.+++. . ++.|..||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~-~-~~~~p~~i~~~~~g~l~v~~-~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPF-N-GLYQPQGLAVDGAGTVYVTD-F-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCC-C-SCCSCCCEEECTTCCEEEEE-T-TTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-Eee-C-CcCCcceeEECCCCCEEEEc-C-CCEEEEEeCCCceE
Confidence 344455543 45666 5 477899999976654322 111 1 33567889999999855555 5 88999999876543
Q ss_pred eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511 277 IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF 353 (488)
Q Consensus 277 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~ 353 (488)
..........+..+++ +++++++...++.|.+|+..+... ..........+..++++|+|+++++.. ++.|.+||.
T Consensus 100 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 3222223356778888 577777777788999997654321 111222233567899999999777666 489999998
Q ss_pred CCCCCCccc----cee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCc
Q psy14511 354 RQLDAKRPL----GLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADET 428 (488)
Q Consensus 354 ~~~~~~~~~----~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~ 428 (488)
......... ... ..+++++|..+++ ...++.|.+|+............+...+.+++++|+|+++++...++.
T Consensus 179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~--~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 256 (270)
T 1rwi_B 179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVT--EHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR 256 (270)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEE--ETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTE
T ss_pred CCCceEeecccCCCCceEEEECCCCCEEEE--ECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCE
Confidence 765432111 111 1278899976666 456789999998765443322233356899999999998889899999
Q ss_pred EEEEecCCCCcc
Q psy14511 429 ISIWNCFPRDKK 440 (488)
Q Consensus 429 v~iw~~~~~~~~ 440 (488)
|+++++...+..
T Consensus 257 v~~~~~~~~~~~ 268 (270)
T 1rwi_B 257 VVKLTSLEHHHH 268 (270)
T ss_dssp EEEECCCGGGSC
T ss_pred EEEEcCCCcccc
Confidence 999999876653
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.57 E-value=2.1e-11 Score=107.04 Aligned_cols=264 Identities=11% Similarity=0.011 Sum_probs=166.2
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSA 82 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~ 82 (488)
+|+++++...++.|.+||.. ++.....+..+...+.+++++++|++.++.. ++.|..+|.. ++.. . .........
T Consensus 30 ~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~-~~~~~~~~~ 105 (300)
T 2qc5_A 30 DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-E-YPLPQPDSG 105 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-E-EECSSTTCC
T ss_pred CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-E-ecCCCCCCC
Confidence 68877777678999999987 4422222333446789999999999887776 7899999976 3321 1 112223356
Q ss_pred eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511 83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS 162 (488)
Q Consensus 83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (488)
+..+++.++++.+++... ++.|..++.. ++...
T Consensus 106 ~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g~~~~------------------------------------------- 138 (300)
T 2qc5_A 106 PYGITEGLNGDIWFTQLN---GDRIGKLTAD-GTIYE------------------------------------------- 138 (300)
T ss_dssp EEEEEECSTTCEEEEETT---TTEEEEECTT-SCEEE-------------------------------------------
T ss_pred CccceECCCCCEEEEccC---CCeEEEECCC-CCEEE-------------------------------------------
Confidence 889999998865544433 6778888765 43210
Q ss_pred cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCC
Q psy14511 163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA 242 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~ 242 (488)
+..+. ...
T Consensus 139 -----------------------------------------------------------------------~~~~~-~~~ 146 (300)
T 2qc5_A 139 -----------------------------------------------------------------------YDLPN-KGS 146 (300)
T ss_dssp -----------------------------------------------------------------------EECSS-TTC
T ss_pred -----------------------------------------------------------------------ccCCC-CCC
Confidence 00111 234
Q ss_pred ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeee-eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccce
Q psy14511 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQ-KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPT 319 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~ 319 (488)
.+..+++.++++..++. ..++.|..+|. +++... ....+...+..+.+ ++++.++....+.|.+||. ++.....
T Consensus 147 ~~~~i~~d~~g~l~v~~-~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTE-NQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY 223 (300)
T ss_dssp CEEEEEECTTSSEEEEE-TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred CceeEEECCCCCEEEEe-cCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE
Confidence 57789999999855555 66788999988 444332 22233456778888 4666666666778999998 3322222
Q ss_pred eeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCccee
Q psy14511 320 AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLI 398 (488)
Q Consensus 320 ~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~ 398 (488)
....+...+.+++++++|++.++.. ++.|..||.. + .+..+.+
T Consensus 224 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g-----------------------------~~~~~~~------ 267 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-N-----------------------------TIQEYQL------ 267 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S-----------------------------CEEEEEC------
T ss_pred ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-C-----------------------------cEEEEEC------
Confidence 2233445678899999988666554 3777777652 1 1222221
Q ss_pred EEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511 399 EELKIHQERILSAVLSPDQTCVAAASADETISIWNC 434 (488)
Q Consensus 399 ~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~ 434 (488)
......+.++++.++|+++++.. . .|..++.
T Consensus 268 ---~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 268 ---QTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp ---CSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred ---CccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 11234578899999998666554 4 6666664
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.56 E-value=1.9e-12 Score=128.57 Aligned_cols=181 Identities=13% Similarity=0.020 Sum_probs=112.3
Q ss_pred EEEEEcCCCCeEEEEeCCCC--------------cEEEEECCcce----eeeeeccccccEEEEEe--cCCEEEEeecCC
Q psy14511 245 SCVAWKPRTTDLAVTNTCTE--------------YIDLWHEQEER----LIQKLRTHMHQVIAMCW--NGNLLSCGTIGG 304 (488)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~--------------~i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 304 (488)
..++|+|| +.|+.+ ..++ .|++|++.++. .+.....+...+..+.| ||++|+..+.++
T Consensus 212 ~~~~wspD-~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 212 SGLAWLGN-DALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CCCEESTT-SEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred ccEEEECC-CEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 35678888 888877 4433 38899987654 22222233334677777 788888877544
Q ss_pred -----eEEEEECcCCCcc-ceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEE
Q psy14511 305 -----NILHYDVRTHSDY-PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVT 378 (488)
Q Consensus 305 -----~i~i~d~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~ 378 (488)
.|++||+.++... ...+..+...+... ++|+|+.|+..++.
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~-------------------------------- 336 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGD-------------------------------- 336 (741)
T ss_dssp TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECT--------------------------------
T ss_pred CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECC--------------------------------
Confidence 8999999875222 44555554444444 34788877766531
Q ss_pred EccCCCCeEEEEeCCCc--ceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC-CCCcccccc--ccCCcceEE
Q psy14511 379 SHGKQDCSLKMWEYPRL--HLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF-PRDKKRKAR--QVGSGSSLE 453 (488)
Q Consensus 379 ~~g~~~~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~-~~~~~~~~~--~~~~v~~~~ 453 (488)
+..++.|.+||+.++ +....+..+...+..++|+ ++.++++...|+..+||.+. +++...... ..+.+..+.
T Consensus 337 --~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~ 413 (741)
T 1yr2_A 337 --GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLS 413 (741)
T ss_dssp --TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEE
T ss_pred --CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEee
Confidence 122445666666553 2233334445567778887 66788888899988777665 343332222 356678889
Q ss_pred eecCCCceEE
Q psy14511 454 FAILKQPVSL 463 (488)
Q Consensus 454 ~s~~~~~~~~ 463 (488)
++|++..+.+
T Consensus 414 ~s~d~~~l~~ 423 (741)
T 1yr2_A 414 GRPGDRHAYL 423 (741)
T ss_dssp CCBTCSCEEE
T ss_pred cCCCCCEEEE
Confidence 9999877654
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.54 E-value=1.3e-11 Score=109.20 Aligned_cols=245 Identities=12% Similarity=0.123 Sum_probs=150.7
Q ss_pred CCceEEE-------eecCCeEEEEEcccCcccceee---cccCceEEEEEEccC-CcEEEEecCCeEEEEeccccCcCCC
Q psy14511 4 NGNLLSC-------GTIGGNILHYDVRTHSDYPTAI---TREGDVVCGLKWSPN-GRYLASGSNNTVKIWDFRQLDAKRP 72 (488)
Q Consensus 4 dg~~la~-------g~~dg~i~iwd~~~~~~~~~~~---~~h~~~V~~l~~sp~-g~~las~~d~~i~vwd~~~~~~~~~ 72 (488)
+|+++++ +..++.|.+||..+++...... .++...+.+++++++ |+++++...+.|.+||.+ ++....
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEI 106 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEEC
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEE
Confidence 6777777 6778999999987776321111 125567899999999 887776665578999987 443221
Q ss_pred -cccccc-cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEee
Q psy14511 73 -QVNNQC-HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHG 150 (488)
Q Consensus 73 -~~~~~~-h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (488)
.....+ ....+.++++.++|+.+++... ++.. .... ....
T Consensus 107 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---~~~~----~~~~------~~~~------------------------- 148 (314)
T 1pjx_A 107 AKKDSEGRRMQGCNDCAFDYEGNLWITAPA---GEVA----PADY------TRSM------------------------- 148 (314)
T ss_dssp CSBCTTSCBCBCCCEEEECTTSCEEEEECB---CBCT----TSCC------CBTT-------------------------
T ss_pred EeccCCCccccCCcCEEECCCCCEEEEecC---cccc----cccc------cccc-------------------------
Confidence 111111 2245889999999865544432 3110 0000 0000
Q ss_pred eeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCce
Q psy14511 151 FEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKT 230 (488)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~ 230 (488)
....+.|..|+.. ++.
T Consensus 149 ---------------------------------------------------------------~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 149 ---------------------------------------------------------------QEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp ---------------------------------------------------------------SSSCEEEEEECTT-SCE
T ss_pred ---------------------------------------------------------------cCCCCeEEEECCC-CCE
Confidence 0001223333333 222
Q ss_pred EEEEecCCCCCCceEEEEEc----CCCCeEEEEeCCCCcEEEEECC-cce-----eeeeecccc-ccEEEEEe--cCCEE
Q psy14511 231 QLLVEYPTYDNAYISCVAWK----PRTTDLAVTNTCTEYIDLWHEQ-EER-----LIQKLRTHM-HQVIAMCW--NGNLL 297 (488)
Q Consensus 231 ~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~~~~~i~i~d~~-~~~-----~~~~~~~~~-~~v~~~~~--~~~~l 297 (488)
..... .......++++ |+++.++++...++.|.+||.. .++ ....+..+. .....+++ +|+++
T Consensus 165 ~~~~~----~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~ 240 (314)
T 1pjx_A 165 IQVDT----AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL 240 (314)
T ss_dssp EEEEE----EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE
T ss_pred EEecc----CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE
Confidence 22211 22245788999 9997776664678899999976 333 222333333 55677887 57777
Q ss_pred EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCC
Q psy14511 298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQL 356 (488)
Q Consensus 298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~ 356 (488)
++...++.|.+||..+++ ....+..+...+.+++|+|+++.|..++ . +.|..|++...
T Consensus 241 v~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 241 VANWGSSHIEVFGPDGGQ-PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEETTTEEEEECTTCBS-CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCEEEEEcCCCCc-EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 777788999999987543 4445555656789999999999666555 3 79999998753
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.51 E-value=2.5e-10 Score=100.13 Aligned_cols=262 Identities=8% Similarity=-0.012 Sum_probs=167.9
Q ss_pred cCceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecC
Q psy14511 35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSM 113 (488)
Q Consensus 35 h~~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~ 113 (488)
....+.+++++++|++.++.. ++.|.+||.. ++... + .+..+...+..+++.+++..+++... ++.|..+|..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~-~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~ 91 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-F-EVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK 91 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-E-ECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-E-ECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC
Confidence 345688999999999888775 8999999976 33221 1 12233467889999998865444433 6778888865
Q ss_pred CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511 114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP 193 (488)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (488)
++.. .
T Consensus 92 -g~~~-~------------------------------------------------------------------------- 96 (300)
T 2qc5_A 92 -GGFT-E------------------------------------------------------------------------- 96 (300)
T ss_dssp -SCEE-E-------------------------------------------------------------------------
T ss_pred -CCeE-E-------------------------------------------------------------------------
Confidence 4321 0
Q ss_pred CccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511 194 SIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273 (488)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~ 273 (488)
+..+. ....+.++++.++++..++. ..++.|..+|..
T Consensus 97 ----------------------------------------~~~~~-~~~~~~~i~~~~~g~l~v~~-~~~~~i~~~~~~- 133 (300)
T 2qc5_A 97 ----------------------------------------YPLPQ-PDSGPYGITEGLNGDIWFTQ-LNGDRIGKLTAD- 133 (300)
T ss_dssp ----------------------------------------EECSS-TTCCEEEEEECSTTCEEEEE-TTTTEEEEECTT-
T ss_pred ----------------------------------------ecCCC-CCCCCccceECCCCCEEEEc-cCCCeEEEECCC-
Confidence 01111 22457788999988776666 668889999987
Q ss_pred ceeee-eeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-CeEE
Q psy14511 274 ERLIQ-KLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVK 349 (488)
Q Consensus 274 ~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~~i~ 349 (488)
++... .+......+..+.+ ++++.++...++.|..+|. ++.........+...+..++++++|++.++... +.|.
T Consensus 134 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 134 GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 44432 23333456778888 5676666666788999998 333222222233456788999998877666553 6677
Q ss_pred EEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcE
Q psy14511 350 IWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETI 429 (488)
Q Consensus 350 iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v 429 (488)
+||.. + .+..+. +..+...+.+++++++|+++++...++.|
T Consensus 213 ~~~~~-g-----------------------------~~~~~~---------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 253 (300)
T 2qc5_A 213 RITTT-G-----------------------------EISEYD---------IPTPNARPHAITAGKNSEIWFTEWGANQI 253 (300)
T ss_dssp EECTT-C-----------------------------CEEEEE---------CSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred EEcCC-C-----------------------------cEEEEE---------CCCCCCCceEEEECCCCCEEEeccCCCeE
Confidence 77652 1 111111 11234567899999999977777677899
Q ss_pred EEEecCCCCcccc--ccccCCcceEEeecCCCce
Q psy14511 430 SIWNCFPRDKKRK--ARQVGSGSSLEFAILKQPV 461 (488)
Q Consensus 430 ~iw~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~ 461 (488)
..|+. +++.... ......+.++++.+++..+
T Consensus 254 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 286 (300)
T 2qc5_A 254 GRITN-DNTIQEYQLQTENAEPHGITFGKDGSVW 286 (300)
T ss_dssp EEECT-TSCEEEEECCSTTCCCCCEEECTTSCEE
T ss_pred EEECC-CCcEEEEECCccCCccceeEeCCCCCEE
Confidence 99998 3443321 2234567888888887643
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=2e-11 Score=110.24 Aligned_cols=271 Identities=8% Similarity=0.004 Sum_probs=166.6
Q ss_pred cCCcEEEEec--C----CeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCC-------cccceEEEEec
Q psy14511 46 PNGRYLASGS--N----NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGG-------ICDQTVRLWNS 112 (488)
Q Consensus 46 p~g~~las~~--d----~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~-------~~d~~i~vwd~ 112 (488)
|+++.+.... + +.|.+.|..+.+....+ ..-..+ .+.++||+++++++... ..++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I---~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMT---DGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE---EECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEE---ECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 4677665554 3 79999999885544333 222234 89999999998887620 01678999999
Q ss_pred CCCeeeeeeecCCC-------ccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCC
Q psy14511 113 MNGKEKCHVKTDSQ-------QANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAK 185 (488)
Q Consensus 113 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (488)
.+++.+..+..... ....+.
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~----------------------------------------------------- 183 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNA----------------------------------------------------- 183 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSE-----------------------------------------------------
T ss_pred CCCcEEEEEECCCccccccCCCcceEE-----------------------------------------------------
Confidence 99988777654310 000111
Q ss_pred CceeecCCCccccceeeeeeeCCCcEEEEEC--CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCC-CeEEEEeCC
Q psy14511 186 PERILEAPSIINDFYTSGLDWGYHDTLAVAL--DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRT-TDLAVTNTC 262 (488)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~ 262 (488)
++.++..++++.. ++.|.+.|+.+++....+...+ +....|++ +.+++. +.
T Consensus 184 ------------------~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g-------~~~~~p~g~~~~v~~-~~ 237 (426)
T 3c75_H 184 ------------------LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD-------CYHIFPASPTVFYMN-CR 237 (426)
T ss_dssp ------------------ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-------EEEEEEEETTEEEEE-ET
T ss_pred ------------------EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-------ceeeccCCCcEEEEE-cC
Confidence 1112345666653 6889999999999888777643 12233433 223333 56
Q ss_pred CCcEEEEECCcceeee----eeccccccE---EEEEecCCEEEEeecCCeEEEEECcCCCcc-ceeee-------c---C
Q psy14511 263 TEYIDLWHEQEERLIQ----KLRTHMHQV---IAMCWNGNLLSCGTIGGNILHYDVRTHSDY-PTAIT-------R---E 324 (488)
Q Consensus 263 ~~~i~i~d~~~~~~~~----~~~~~~~~v---~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-------~---~ 324 (488)
||.+.+.+..+++... .+.....++ ..+..++..++.....+.+.+.|....... ...+. . .
T Consensus 238 dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 238 DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 6666666664443331 111111111 112235666666677889999998653211 01110 0 0
Q ss_pred CccEEEEEEccCCcEEEEEe-----------cCeEEEEECCCCCCCcccceee----eeecCCCC-EEEEEccCCCCeEE
Q psy14511 325 GDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQLDAKRPLGLIV----PKLKREGR-ELVTSHGKQDCSLK 388 (488)
Q Consensus 325 ~~~i~~~~~s~~~~~l~~~~-----------d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~-~l~~~~g~~~~~i~ 388 (488)
......++++|+++.+++.. .+.|.++|..+.+....+.... ..|+|||+ .++++ ...++.|.
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~-n~~s~~Vs 396 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYAL-SAGTQTLH 396 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEE-ETTTTEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEE-cCCCCeEE
Confidence 01112368999988777654 2479999999987666554332 29999999 77774 44689999
Q ss_pred EEeCCCcceeEEE
Q psy14511 389 MWEYPRLHLIEEL 401 (488)
Q Consensus 389 i~d~~~~~~~~~~ 401 (488)
++|+.+++.+.++
T Consensus 397 VID~~t~kvv~tI 409 (426)
T 3c75_H 397 IYDAATGEELRSV 409 (426)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCCEEEEe
Confidence 9999999999887
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.50 E-value=3.4e-11 Score=106.56 Aligned_cols=153 Identities=9% Similarity=0.068 Sum_probs=91.9
Q ss_pred ceEEEEEcCCCCeEEEEeCCC---------------CcEEEEECCcceeeeeeccccccEEEEEec------CCEEEEe-
Q psy14511 243 YISCVAWKPRTTDLAVTNTCT---------------EYIDLWHEQEERLIQKLRTHMHQVIAMCWN------GNLLSCG- 300 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~---------------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~- 300 (488)
.+.+++++++|+..++. ..+ +.|..++.. ++..... .+......++++ ++.++.+
T Consensus 118 ~~~~i~~d~~g~l~v~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITA-PAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCCEEEECTTSCEEEEE-CBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred CCcCEEECCCCCEEEEe-cCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence 46678888888766655 443 567777765 4333222 222234455554 4455444
Q ss_pred ecCCeEEEEECcCCCc-----cceeeecCC-ccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeeeeecCCC
Q psy14511 301 TIGGNILHYDVRTHSD-----YPTAITREG-DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREG 373 (488)
Q Consensus 301 ~~dg~i~i~d~~~~~~-----~~~~~~~~~-~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 373 (488)
..++.|.+||...... ....+..+. ..+..++++++|+++++.. ++.|.+||.
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~-------------------- 254 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP-------------------- 254 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT--------------------
T ss_pred CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcC--------------------
Confidence 5678999999762111 111222232 4567788888887666554 355555554
Q ss_pred CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEE-EEEeCCCcEEEEecCCC
Q psy14511 374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCV-AAASADETISIWNCFPR 437 (488)
Q Consensus 374 ~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~t~~~dg~v~iw~~~~~ 437 (488)
.+++.+..+..+...+.+++|+|+++.| ++...++.|..|++...
T Consensus 255 -------------------~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 255 -------------------DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp -------------------TCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred -------------------CCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 3344444444555678999999999955 45556688999998753
No 209
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.47 E-value=1.8e-11 Score=108.82 Aligned_cols=229 Identities=9% Similarity=-0.031 Sum_probs=150.2
Q ss_pred CCeEEEEECCCCceEEEEecCCCC----CCceEEEEEcCCCCeEEEEeCC-CCcEEE--EECCcceeeeeeccccccEEE
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYD----NAYISCVAWKPRTTDLAVTNTC-TEYIDL--WHEQEERLIQKLRTHMHQVIA 289 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~-~~~i~i--~d~~~~~~~~~~~~~~~~v~~ 289 (488)
++.|.+||+.+++....+..++.. ......++++|||++++++... +..+.+ +|..+ +..+... +. ..
T Consensus 95 ~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~-~~ 169 (368)
T 1mda_H 95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC-FH 169 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC-CC
T ss_pred CCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc-eE
Confidence 688999999999998888764201 1245679999999999998333 456888 88877 3344221 11 12
Q ss_pred EEec-CCEEEEeecCCeEEEEECcC----CCccce----eeecCCccEEEEEEccCCc-EEEEEecCeEEEEECCCCCC-
Q psy14511 290 MCWN-GNLLSCGTIGGNILHYDVRT----HSDYPT----AITREGDVVCGLKWSPNGR-YLASGSNNTVKIWDFRQLDA- 358 (488)
Q Consensus 290 ~~~~-~~~l~~~~~dg~i~i~d~~~----~~~~~~----~~~~~~~~i~~~~~s~~~~-~l~~~~d~~i~iwd~~~~~~- 358 (488)
+..+ .+.+++.+.||.+.+.|+.+ ..+... .+.-...+. + ++++. ++.+.. +.+.+.|+.....
T Consensus 170 ~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~ 244 (368)
T 1mda_H 170 IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGAT 244 (368)
T ss_dssp CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCE
T ss_pred EccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcce
Confidence 3333 45566777888888888876 222211 111122333 3 45544 444444 8899999864321
Q ss_pred -Ccccce---------------eeeeecCCCCEEEEEcc-C-C-----CCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511 359 -KRPLGL---------------IVPKLKREGRELVTSHG-K-Q-----DCSLKMWEYPRLHLIEELKIHQERILSAVLSP 415 (488)
Q Consensus 359 -~~~~~~---------------~~~~~~~~~~~l~~~~g-~-~-----~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~ 415 (488)
...+.. ....++|+++.++++.. . . ++.+.++|+.+.+.+.++.... ....++|+|
T Consensus 245 v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~ 323 (368)
T 1mda_H 245 MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQ 323 (368)
T ss_dssp EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECC
T ss_pred EEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECC
Confidence 111100 01368999999887533 1 1 2356699999999988887554 588999999
Q ss_pred CCC-EEEEEe-CCCcEEEEecCCCCccccccccCCcceEEeec
Q psy14511 416 DQT-CVAAAS-ADETISIWNCFPRDKKRKARQVGSGSSLEFAI 456 (488)
Q Consensus 416 ~~~-~l~t~~-~dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~ 456 (488)
||+ .+++.. .++.|.++|+.+++......-......+++.+
T Consensus 324 Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 324 DGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred CCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeec
Confidence 998 456666 59999999999999887766666667776654
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.46 E-value=2.7e-11 Score=119.14 Aligned_cols=181 Identities=10% Similarity=0.034 Sum_probs=107.7
Q ss_pred CeEEEEECCCCce--EEEEecCCCCCCceEEEEEcCCCCeEEEEeCC---CCcEEEEECCcce-eeeeeccccccEEE-E
Q psy14511 218 TSVYTWNTKTNKT--QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC---TEYIDLWHEQEER-LIQKLRTHMHQVIA-M 290 (488)
Q Consensus 218 ~~v~iw~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~~i~i~d~~~~~-~~~~~~~~~~~v~~-~ 290 (488)
..|++|++.++.. ..++.....+......+.|+|||++|+..... ...|+++|+.++. ....+..+...... +
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~ 287 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLV 287 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEE
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEE
Confidence 4566666665543 22222210012346789999999998776332 3589999987753 34444444444333 4
Q ss_pred EecCCEEEEee-c---CCeEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEe-c-C--eEEEEECCCCCCCcc
Q psy14511 291 CWNGNLLSCGT-I---GGNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N-N--TVKIWDFRQLDAKRP 361 (488)
Q Consensus 291 ~~~~~~l~~~~-~---dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~--~i~iwd~~~~~~~~~ 361 (488)
..++..|+..+ . .+.|..+|+.++.. ....+..+...+. .|++++++|+... + + .|++||+.
T Consensus 288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~------- 358 (693)
T 3iuj_A 288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE------- 358 (693)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT-------
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC-------
Confidence 45666555444 3 36799999987542 1244555555554 8899998887765 2 2 45555543
Q ss_pred cceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-eccccEEEEEEcCCCCEEEEEeCC----CcEEEEecCC
Q psy14511 362 LGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-IHQERILSAVLSPDQTCVAAASAD----ETISIWNCFP 436 (488)
Q Consensus 362 ~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~t~~~d----g~v~iw~~~~ 436 (488)
.+ ....+. ...+.+..+.++|+++.|+....+ +.++.||+.+
T Consensus 359 --------------------------------g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 359 --------------------------------GK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp --------------------------------SC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred --------------------------------CC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 11 122222 233456777888888877665544 7899999987
Q ss_pred CCcc
Q psy14511 437 RDKK 440 (488)
Q Consensus 437 ~~~~ 440 (488)
++..
T Consensus 406 g~~~ 409 (693)
T 3iuj_A 406 GAIS 409 (693)
T ss_dssp CCEE
T ss_pred CeEE
Confidence 7654
No 211
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.43 E-value=1.3e-11 Score=109.78 Aligned_cols=269 Identities=10% Similarity=-0.024 Sum_probs=157.9
Q ss_pred eEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec-----------CCeEEEEeccccCcCCCccccccc----c
Q psy14511 16 NILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-----------NNTVKIWDFRQLDAKRPQVNNQCH----L 80 (488)
Q Consensus 16 ~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~-----------d~~i~vwd~~~~~~~~~~~~~~~h----~ 80 (488)
.|.++|..+++.+.++-.+.. + .+.++|||++|..+. ++.|.+||..+++....+..-.+. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 888999999987655444544 5 799999999888774 588999999986654433211000 1
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEE--EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRL--WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV 158 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (488)
.....++|+|||++++++... .+..+.+ +|+.+ +..+...
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~-~~~~v~V~~iD~~t---v~~i~v~---------------------------------- 165 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFG-SSAAAGLSVPGASD---DQLTKSA---------------------------------- 165 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECS-SSCEEEEEETTTEE---EEEEECS----------------------------------
T ss_pred CCcceEEEcCCCCEEEEEccC-CCCeEEEEEEchhh---ceEEECC----------------------------------
Confidence 245689999999998887641 1356777 77754 2222110
Q ss_pred eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCC
Q psy14511 159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPT 238 (488)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~ 238 (488)
+
T Consensus 166 -------------------------------------------------------------------------------~ 166 (368)
T 1mda_H 166 -------------------------------------------------------------------------------S 166 (368)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc-----ceeee----eeccccccEEEEEecCCEEEEeecCCeEEEE
Q psy14511 239 YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE-----ERLIQ----KLRTHMHQVIAMCWNGNLLSCGTIGGNILHY 309 (488)
Q Consensus 239 ~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~-----~~~~~----~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~ 309 (488)
. ..+.|+++..+.+.+.|+.+.+.|+.+ ++... .+.....+. . ..++..++..+. +.+.+.
T Consensus 167 ----~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~vi 236 (368)
T 1mda_H 167 ----C---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQG 236 (368)
T ss_dssp ----C---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEE
T ss_pred ----c---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEE
Confidence 0 001122222222213444444444443 22211 111122233 2 335566555556 889999
Q ss_pred ECcCCCc-cceeee-------cCC---ccEEEEEEccCCcEEEEEe----------cCeEEEEECCCCCCCcccceeee-
Q psy14511 310 DVRTHSD-YPTAIT-------REG---DVVCGLKWSPNGRYLASGS----------NNTVKIWDFRQLDAKRPLGLIVP- 367 (488)
Q Consensus 310 d~~~~~~-~~~~~~-------~~~---~~i~~~~~s~~~~~l~~~~----------d~~i~iwd~~~~~~~~~~~~~~~- 367 (488)
|...... ....+. .+. .....++++|+++.+..+. ++.+.++|+.+.+....+.....
T Consensus 237 D~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p 316 (368)
T 1mda_H 237 DIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDS 316 (368)
T ss_dssp ECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEE
T ss_pred ECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCc
Confidence 9865321 111111 011 1111268999998877643 22566999999876655543322
Q ss_pred ---eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcC
Q psy14511 368 ---KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP 415 (488)
Q Consensus 368 ---~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~ 415 (488)
.|+|||+.++++....++.|.++|+.+++.+.++..... ...+++.+
T Consensus 317 ~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 317 DAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred ceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 999999976665333589999999999999998875544 34555543
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.43 E-value=3.8e-10 Score=98.69 Aligned_cols=220 Identities=11% Similarity=0.136 Sum_probs=146.8
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY 317 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 317 (488)
......+..|+|++..|+.....++.|..||..+++. ..+ .....+.++.+ +++++++ . ++.|.+||..++. .
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~-~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS-A 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE-E
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc-E
Confidence 3445678899997776666647889999999987654 223 23467888888 5775444 4 5689999987653 2
Q ss_pred ceeeec----CCccEEEEEEccCCcEEEEEec----------CeEEEEECCCCCCCccc-cee----eeeecCCCCEEEE
Q psy14511 318 PTAITR----EGDVVCGLKWSPNGRYLASGSN----------NTVKIWDFRQLDAKRPL-GLI----VPKLKREGRELVT 378 (488)
Q Consensus 318 ~~~~~~----~~~~i~~~~~s~~~~~l~~~~d----------~~i~iwd~~~~~~~~~~-~~~----~~~~~~~~~~l~~ 378 (488)
...... ....++.++++|+|+++++... ..-.+|.+........+ ... -.+|+|+++.+++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEE
Confidence 111111 2245789999999997776531 22355555432111111 111 1289999998876
Q ss_pred EccCCCCeEEEEeC--CCcce-----eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc-ccCCcc
Q psy14511 379 SHGKQDCSLKMWEY--PRLHL-----IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR-QVGSGS 450 (488)
Q Consensus 379 ~~g~~~~~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~-~~~~v~ 450 (488)
+ ...++.|.+|++ .+++. ...+..+......+++.++|++.++....+.|..||..+++...... ....++
T Consensus 166 ~-~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 166 I-DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp E-EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred e-cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce
Confidence 5 456789999987 45543 22233344568899999999988888888899999999888764433 336789
Q ss_pred eEEee-cCCCceEEEE
Q psy14511 451 SLEFA-ILKQPVSLTA 465 (488)
Q Consensus 451 ~~~~s-~~~~~~~~~~ 465 (488)
+++|. |+++.+.+..
T Consensus 245 ~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 245 SCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEESGGGCEEEEEE
T ss_pred EEEEeCCCCCEEEEEc
Confidence 99998 8887765544
No 213
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.42 E-value=9.4e-10 Score=99.91 Aligned_cols=214 Identities=11% Similarity=-0.002 Sum_probs=134.8
Q ss_pred CCcEEEEECCCeEEEEECCCCceEEEEecCCCCC--CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccc
Q psy14511 208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH 285 (488)
Q Consensus 208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~ 285 (488)
++.+++++.++.|..+|..+++..-......... ......... +..++++ +.++.+..+|..+++.+........
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g-~~~g~l~~~d~~tG~~~w~~~~~~~ 219 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVG-GDNGRVSAVLMEQGQMIWQQRISQA 219 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEEC-CTTTEEEEEETTTCCEEEEEECCC-
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEE-cCCCEEEEEECCCCcEEEEEecccC
Confidence 4567888889999999999998776665432010 000111222 3467777 7899999999999888766543211
Q ss_pred c----------E-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEEC
Q psy14511 286 Q----------V-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF 353 (488)
Q Consensus 286 ~----------v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~ 353 (488)
. + ......+..++.++.++.+..+|..+++.. .... ......+.. ++..+..++ ++.+..+|.
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~-w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~ 294 (376)
T 3q7m_A 220 TGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIM-WKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTI 294 (376)
T ss_dssp ----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEE-EEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEET
T ss_pred CCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEE-eecc--CCCCCCceE--ECCEEEEEcCCCeEEEEEC
Confidence 0 0 111225677888888999999999887532 2222 222334443 344555555 699999999
Q ss_pred CCCCCCcccce----eeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEE-EEEcCCCCEEEEEeCCCc
Q psy14511 354 RQLDAKRPLGL----IVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILS-AVLSPDQTCVAAASADET 428 (488)
Q Consensus 354 ~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~t~~~dg~ 428 (488)
.+++..-.... ........+..+++ +..+|.++.+|..+++.+.........+.. ... .+..|+.++.+|.
T Consensus 295 ~tG~~~w~~~~~~~~~~~~~~~~~~~l~v--~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 295 DGGVTLWTQSDLLHRLLTSPVLYNGNLVV--GDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGT 370 (376)
T ss_dssp TTCCEEEEECTTTTSCCCCCEEETTEEEE--ECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSC
T ss_pred CCCcEEEeecccCCCcccCCEEECCEEEE--EeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCE
Confidence 88864322210 11111223556666 577899999999999988877653333322 222 3567888899999
Q ss_pred EEEEe
Q psy14511 429 ISIWN 433 (488)
Q Consensus 429 v~iw~ 433 (488)
|+.|+
T Consensus 371 l~~~~ 375 (376)
T 3q7m_A 371 VYSIT 375 (376)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99887
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=1.7e-10 Score=100.93 Aligned_cols=225 Identities=12% Similarity=0.128 Sum_probs=139.6
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccc-c-ccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQ-C-HLS 81 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~-~-h~~ 81 (488)
++.++.+...++.|..||..+++. ..+ .....+.+++++|+|+++++. +..|.+||.++++.. .+.... + ...
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~--~~~-~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~-~~~~~~~~~~~~ 98 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQV--QRV-TMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAV-VLATVDNDKKNN 98 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCE--EEE-ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEE-EEEECCTTCSSE
T ss_pred CCEEEEEECCCCEEEEEECCCCcE--EEE-eCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEE-EEEecCCCCCCC
Confidence 456777777889999999987663 222 344679999999999966554 678999998765422 221111 1 224
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
.+..+++.|+|+.++++.. +... ... ...
T Consensus 99 ~~~di~~d~dG~l~~~~~~---~~~~------~~~----~~~-------------------------------------- 127 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMA---EETA------PAV----LER-------------------------------------- 127 (297)
T ss_dssp EEEEEEECTTSCEEEEEEE---CCSB------TTB----CCT--------------------------------------
T ss_pred CCCCEEECCCCCEEEecCC---cccc------ccc----ccC--------------------------------------
Confidence 5788999999975544332 1100 000 000
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN 241 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 241 (488)
..+.|+.++.. ++...... ..
T Consensus 128 ------------------------------------------------------~~~~l~~~d~~-g~~~~~~~----~~ 148 (297)
T 3g4e_A 128 ------------------------------------------------------HQGALYSLFPD-HHVKKYFD----QV 148 (297)
T ss_dssp ------------------------------------------------------TCEEEEEECTT-SCEEEEEE----EE
T ss_pred ------------------------------------------------------CCcEEEEEECC-CCEEEEee----cc
Confidence 00111112211 11111111 22
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEEC--Cccee-----eeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECc
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHE--QEERL-----IQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVR 312 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 312 (488)
...+.++|+|+++.++++.+.++.|..|++ .++.. ...+..+......+++ +|++.++...++.|..||..
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 346789999999988777577889999987 34332 2233333456677777 57777777778889999998
Q ss_pred CCCccceeeecCCccEEEEEEc-cCCcEEEEEe
Q psy14511 313 THSDYPTAITREGDVVCGLKWS-PNGRYLASGS 344 (488)
Q Consensus 313 ~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~ 344 (488)
+++ ....+..+...+++++|. |+++.|..++
T Consensus 229 tG~-~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 229 TGK-RLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp TCC-EEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred Cce-EEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 653 555666666679999998 8888776654
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.41 E-value=2.3e-10 Score=111.60 Aligned_cols=241 Identities=11% Similarity=0.029 Sum_probs=148.4
Q ss_pred CCeEEEEECCCCceEEEEecCCCC----------------------------CCceEEEEEcCCCCeEEEEeCCCC----
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYD----------------------------NAYISCVAWKPRTTDLAVTNTCTE---- 264 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~----------------------------~~~i~~~~~~~~~~~l~~~~~~~~---- 264 (488)
++.|+.||..+++.+-.+...... ......++++|+...++++ +.++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~-~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIG-VGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEe-CCCCCccc
Confidence 689999999999877655421100 0111257889988898888 7665
Q ss_pred ---------------cEEEEECCcceeeeeecc--cc-------ccE--EEEEecCC---EEEEeecCCeEEEEECcCCC
Q psy14511 265 ---------------YIDLWHEQEERLIQKLRT--HM-------HQV--IAMCWNGN---LLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 265 ---------------~i~i~d~~~~~~~~~~~~--~~-------~~v--~~~~~~~~---~l~~~~~dg~i~i~d~~~~~ 315 (488)
.|..+|.++++.+..++. |. .+. ..+.++|+ .++.++.+|.++++|.++++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 399999999998877754 21 111 23334665 78899999999999999876
Q ss_pred ccceeeecC---------------------------Ccc-----------EEEEEEccCCcEEEEEe-cCeEEEEECCCC
Q psy14511 316 DYPTAITRE---------------------------GDV-----------VCGLKWSPNGRYLASGS-NNTVKIWDFRQL 356 (488)
Q Consensus 316 ~~~~~~~~~---------------------------~~~-----------i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~ 356 (488)
......... ... -..++++|+..++++.. +....++.....
T Consensus 341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 420 (689)
T 1yiq_A 341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA 420 (689)
T ss_dssp EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence 321110000 000 01267888888887776 344444443321
Q ss_pred CCCcccceeeeeecCCCCEEEE----------EccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCC
Q psy14511 357 DAKRPLGLIVPKLKREGRELVT----------SHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASAD 426 (488)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~l~~----------~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~d 426 (488)
. ........+.. +..+.. .....+|.|+.||+.+++.+..+..+. ++..-.++..+.+++.++.|
T Consensus 421 ~---~~~~~~~~~~~-g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~d 495 (689)
T 1yiq_A 421 P---KRNPFKSMYQL-GLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSAD 495 (689)
T ss_dssp C---CCCSCTTSCCC-SSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTT
T ss_pred c---ccccccccccc-CccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCC
Confidence 0 00000000000 000000 001125889999999999988877553 34444666788899999999
Q ss_pred CcEEEEecCCCCcccccccc--CCcceEEeecCCCceEE
Q psy14511 427 ETISIWNCFPRDKKRKARQV--GSGSSLEFAILKQPVSL 463 (488)
Q Consensus 427 g~v~iw~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~~ 463 (488)
|.++.||..+++.+...... ....-+.|+.+|+.+..
T Consensus 496 g~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 496 GRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 99999999999988543322 22345777888886644
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=9.3e-11 Score=104.89 Aligned_cols=174 Identities=9% Similarity=-0.010 Sum_probs=112.6
Q ss_pred CceEEEEEcCCCCeEEEEeC---CCCcEEEEECCcceeeeeeccccccE---EEEEecCCEEEEeecCCeEEEEECcCCC
Q psy14511 242 AYISCVAWKPRTTDLAVTNT---CTEYIDLWHEQEERLIQKLRTHMHQV---IAMCWNGNLLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~v---~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 315 (488)
..+..+++++++..++++.. .++.|.+||+.+++..+.+..|.... ..+.+++..+.+.+.++.+..|.
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~----- 194 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH----- 194 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC-----
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee-----
Confidence 45678899987667666634 57899999998887766665542211 23344666666666777665442
Q ss_pred ccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECC---CCCC-----Ccccce-----e--eeeecCCCCEEEE
Q psy14511 316 DYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFR---QLDA-----KRPLGL-----I--VPKLKREGRELVT 378 (488)
Q Consensus 316 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~---~~~~-----~~~~~~-----~--~~~~~~~~~~l~~ 378 (488)
..+..++|+|+|+.|+.+. . ..+..++.. .... ...+.. . -.+++++|..+++
T Consensus 195 ----------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va 264 (343)
T 2qe8_A 195 ----------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVG 264 (343)
T ss_dssp ----------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEE
T ss_pred ----------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEE
Confidence 1367899999999888887 4 556555532 1100 001111 1 1288899988877
Q ss_pred EccCCCCeEEEEeCCCcceeEEEeec-cccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511 379 SHGKQDCSLKMWEYPRLHLIEELKIH-QERILSAVLSPDQTCVAAASADETISIW 432 (488)
Q Consensus 379 ~~g~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~t~~~dg~v~iw 432 (488)
...++.|.+||.++++........ -..+.+++|.++++++++.+..+.+.+|
T Consensus 265 --~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 265 --DLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp --EGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred --ccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 567889999998667643333322 3468999999999888887765544433
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=2.1e-11 Score=108.50 Aligned_cols=171 Identities=9% Similarity=0.025 Sum_probs=119.8
Q ss_pred eEEEEEEccCCcEEEEecCCeEEEEeccccCc--------CCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEE
Q psy14511 38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDA--------KRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL 109 (488)
Q Consensus 38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~--------~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~v 109 (488)
.++.+++++...++++|+...+.+|++++.+. ..+.. ...+.+ |+.|+| |+..|+++ . ++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~---~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-T---RNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-E---SSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-c---CCcEEE
Confidence 68999999999999999955777799875430 11111 233566 999999 78776666 5 899999
Q ss_pred EecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCcee
Q psy14511 110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERI 189 (488)
Q Consensus 110 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (488)
||+.+.............
T Consensus 111 ~dv~sl~~~~~~~~~~~~-------------------------------------------------------------- 128 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKP-------------------------------------------------------------- 128 (388)
T ss_dssp EESSSTTCEEEEEECSSC--------------------------------------------------------------
T ss_pred EEchhhhccCccceeecc--------------------------------------------------------------
Confidence 999766533222211100
Q ss_pred ecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEE
Q psy14511 190 LEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW 269 (488)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~ 269 (488)
+..+.+....++++..||.|.+||+.++.... +...|+|++|+|+| ++++ ..||.+++|
T Consensus 129 -----------v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg-~~dg~i~~~ 187 (388)
T 1xip_A 129 -----------VFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVL-LKDRSFQSF 187 (388)
T ss_dssp -----------EEEEEECSSEEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEE-ETTSCEEEE
T ss_pred -----------eeeEEecCCCEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEE-EcCCcEEEE
Confidence 01122223348888899999999999887654 23479999999999 5666 789999999
Q ss_pred ECCccee--eeee------c---cccccEEEEEe--cCCEEEE
Q psy14511 270 HEQEERL--IQKL------R---THMHQVIAMCW--NGNLLSC 299 (488)
Q Consensus 270 d~~~~~~--~~~~------~---~~~~~v~~~~~--~~~~l~~ 299 (488)
+....+. ..++ . +|...|.++.| ++.++++
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 8877664 4455 2 36789999999 4555554
No 218
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.39 E-value=5.8e-10 Score=108.59 Aligned_cols=203 Identities=10% Similarity=0.064 Sum_probs=136.8
Q ss_pred CCeEEEEECCCCceEEEEecCCCCC-----------------------------CceEEEEEcCCCCeEEEEeCCCC---
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYDN-----------------------------AYISCVAWKPRTTDLAVTNTCTE--- 264 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~~-----------------------------~~i~~~~~~~~~~~l~~~~~~~~--- 264 (488)
++.|+.+|..+++.+-.+....... .....++++|++..++++ +.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~-~~~~~~w 267 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVG-TGNGSPW 267 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESS
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEE-CCCCccc
Confidence 6899999999999876665432110 011357889999898888 6553
Q ss_pred ----------------cEEEEECCcceeeeeecc--cc--------cc-EEEEEecC---CEEEEeecCCeEEEEECcCC
Q psy14511 265 ----------------YIDLWHEQEERLIQKLRT--HM--------HQ-VIAMCWNG---NLLSCGTIGGNILHYDVRTH 314 (488)
Q Consensus 265 ----------------~i~i~d~~~~~~~~~~~~--~~--------~~-v~~~~~~~---~~l~~~~~dg~i~i~d~~~~ 314 (488)
.|..+|..+++.+..++. |. .+ +.....+| +.++.++.+|.++++|..++
T Consensus 268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG 347 (677)
T 1kb0_A 268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG 347 (677)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC
Confidence 599999999998877653 21 12 22333366 68999999999999999987
Q ss_pred Cccceeeec----------CCccE------------------------EEEEEccCCcEEEEEe-c--------------
Q psy14511 315 SDYPTAITR----------EGDVV------------------------CGLKWSPNGRYLASGS-N-------------- 345 (488)
Q Consensus 315 ~~~~~~~~~----------~~~~i------------------------~~~~~s~~~~~l~~~~-d-------------- 345 (488)
+.....-.. ...++ ..++++|++.++++.. +
T Consensus 348 ~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g 427 (677)
T 1kb0_A 348 KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFN 427 (677)
T ss_dssp CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTT
T ss_pred CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccc
Confidence 532211100 00111 1468899888877643 1
Q ss_pred -----------------------------CeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeC
Q psy14511 346 -----------------------------NTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEY 392 (488)
Q Consensus 346 -----------------------------~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~ 392 (488)
+.|..||+.+++..-..... ...+..++..+++ ++.++.+++||.
T Consensus 428 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~--g~~dg~l~a~D~ 505 (677)
T 1kb0_A 428 QAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQ--GTADGRLVAYHA 505 (677)
T ss_dssp CCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE--ECTTSEEEEEET
T ss_pred cccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEE--ECCCCcEEEEEC
Confidence 67999999888654333222 1256677888887 688999999999
Q ss_pred CCcceeEEEeecc-ccEEEEEEcCCCCEEEE
Q psy14511 393 PRLHLIEELKIHQ-ERILSAVLSPDQTCVAA 422 (488)
Q Consensus 393 ~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~t 422 (488)
++++.+.++.... ....-+.|+++|+.++.
T Consensus 506 ~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 506 ATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 9999999887443 22344667788875543
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.38 E-value=2.8e-09 Score=96.74 Aligned_cols=304 Identities=9% Similarity=-0.010 Sum_probs=173.5
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeeccc--------CceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE--------GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN 75 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h--------~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~ 75 (488)
++..|.+++.++.|..+|..+++.+-..-... ...+.+.-...+++.++...++.|..+|.++++..-...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~- 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK- 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe-
Confidence 45567777789999999999888553322211 122322222224444443348999999998866432211
Q ss_pred ccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccc
Q psy14511 76 NQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155 (488)
Q Consensus 76 ~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (488)
. ........... ++ .+++... ++.+..+|..+|+.+.............
T Consensus 131 ~--~~~~~~~p~~~-~~-~v~v~~~---~g~l~~~d~~tG~~~W~~~~~~~~~~~~------------------------ 179 (376)
T 3q7m_A 131 V--AGEALSRPVVS-DG-LVLIHTS---NGQLQALNEADGAVKWTVNLDMPSLSLR------------------------ 179 (376)
T ss_dssp C--SSCCCSCCEEE-TT-EEEEECT---TSEEEEEETTTCCEEEEEECCC-----C------------------------
T ss_pred C--CCceEcCCEEE-CC-EEEEEcC---CCeEEEEECCCCcEEEEEeCCCCceeec------------------------
Confidence 1 11111111222 34 5555554 8999999999998776654431100000
Q ss_pred cceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEe
Q psy14511 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVE 235 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~ 235 (488)
........++.+++++.++.+..+|..+++..-...
T Consensus 180 --------------------------------------------~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 180 --------------------------------------------GESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp --------------------------------------------CCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEE
T ss_pred --------------------------------------------CCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 000011123567777788999999999998776655
Q ss_pred cCCCCCCc--eE---EEEEcC--CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEeecCCeEEE
Q psy14511 236 YPTYDNAY--IS---CVAWKP--RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILH 308 (488)
Q Consensus 236 ~~~~~~~~--i~---~~~~~~--~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 308 (488)
... .... +. .+...| .+..++++ +.++.+..+|..+++.+..... .....+..++..++.++.++.+..
T Consensus 216 ~~~-~~~~~~~~~~~~~~~~p~~~~~~v~~~-~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~~l~~~~~~g~l~~ 291 (376)
T 3q7m_A 216 ISQ-ATGSTEIDRLSDVDTTPVVVNGVVFAL-AYNGNLTALDLRSGQIMWKREL--GSVNDFIVDGNRIYLVDQNDRVMA 291 (376)
T ss_dssp CCC------------CCCCCCEEETTEEEEE-CTTSCEEEEETTTCCEEEEECC--CCEEEEEEETTEEEEEETTCCEEE
T ss_pred ccc-CCCCcccccccccCCCcEEECCEEEEE-ecCcEEEEEECCCCcEEeeccC--CCCCCceEECCEEEEEcCCCeEEE
Confidence 432 1000 00 000111 24577777 7899999999999887766542 334556667888899999999999
Q ss_pred EECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccccee----eeeecCCCCEEEEEccCC
Q psy14511 309 YDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLI----VPKLKREGRELVTSHGKQ 383 (488)
Q Consensus 309 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~~ 383 (488)
+|..+++............+..... .+..|+.++ +|.+..+|..+++........ .......+..+++ +..
T Consensus 292 ~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v--~~~ 367 (376)
T 3q7m_A 292 LTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLI--QAK 367 (376)
T ss_dssp EETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEE--EBT
T ss_pred EECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEE--EeC
Confidence 9998875322221111112222222 244566666 599999999988654332221 1111123445555 567
Q ss_pred CCeEEEEe
Q psy14511 384 DCSLKMWE 391 (488)
Q Consensus 384 ~~~i~i~d 391 (488)
+|.|+.|+
T Consensus 368 ~G~l~~~~ 375 (376)
T 3q7m_A 368 DGTVYSIT 375 (376)
T ss_dssp TSCEEEEE
T ss_pred CCEEEEEe
Confidence 88888876
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.38 E-value=7.7e-10 Score=101.04 Aligned_cols=235 Identities=11% Similarity=0.071 Sum_probs=145.2
Q ss_pred ceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccc--eEEEEecC
Q psy14511 37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQ--TVRLWNSM 113 (488)
Q Consensus 37 ~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~--~i~vwd~~ 113 (488)
.....|+|+|+|+++++.. ++.|++||..++...... . ...... ++|+++++.|+++.. ++ .|.+++..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~---~-~~~~~~-ia~~~~g~~l~~~d~---~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH---P-GFKGGK-PAVTKDKQRVYSIGW---EGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE---E-TCCBCB-CEECTTSSEEEEEBS---STTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee---c-cCCCCc-eeEecCCCcEEEEec---CCCceEEEEEcC
Confidence 3578999999999777776 799999999864432211 1 122233 899999998877775 44 78888876
Q ss_pred CCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCC
Q psy14511 114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAP 193 (488)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (488)
.+.....+......
T Consensus 203 ~~~~~~~~g~~~~~------------------------------------------------------------------ 216 (409)
T 3hrp_A 203 SGWAPTRIGQLGST------------------------------------------------------------------ 216 (409)
T ss_dssp GTTCEEEEEECCTT------------------------------------------------------------------
T ss_pred CCceeEEeeeccch------------------------------------------------------------------
Confidence 54432222000000
Q ss_pred CccccceeeeeeeC--CCcEEEEECCCeEEEEECCCCceEEEEe--cCCCCCCc--eEEEEEcCCCCeEEEEeCCCCcEE
Q psy14511 194 SIINDFYTSGLDWG--YHDTLAVALDTSVYTWNTKTNKTQLLVE--YPTYDNAY--ISCVAWKPRTTDLAVTNTCTEYID 267 (488)
Q Consensus 194 ~~~~~~~~~~~~~~--~~~~~~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~--i~~~~~~~~~~~l~~~~~~~~~i~ 267 (488)
.......+.++ .+.++++..++.|+.||..++....... ..+ .... ...++|+|++..|+++....+.|+
T Consensus 217 ---~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g-~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 217 ---FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSG-SLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp ---SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCS-CCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ---hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccC-CCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 00001112222 3566776678899999998876433311 111 1111 239999997666666647788999
Q ss_pred EEECCcceeeeeeccc---------------cccEEEEEe--cCCEEEEee-cCCeEEEEECcCCCccceeeecC-----
Q psy14511 268 LWHEQEERLIQKLRTH---------------MHQVIAMCW--NGNLLSCGT-IGGNILHYDVRTHSDYPTAITRE----- 324 (488)
Q Consensus 268 i~d~~~~~~~~~~~~~---------------~~~v~~~~~--~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~----- 324 (488)
.|+.... +..+.++ -.....+++ +++++++-. .++.|+.|++.++. +..+.++
T Consensus 293 ~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~--v~~~~g~~~~~g 368 (409)
T 3hrp_A 293 KITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY--VSTVAGQVDVAS 368 (409)
T ss_dssp EECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE--EEEEEECTTCBS
T ss_pred EEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE--EEEEeCCCCCCC
Confidence 9987653 2222222 133677888 577777777 78999999976543 2333332
Q ss_pred ----------CccEEEEEEccCCcEEEEEec-CeEEEEEC
Q psy14511 325 ----------GDVVCGLKWSPNGRYLASGSN-NTVKIWDF 353 (488)
Q Consensus 325 ----------~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~ 353 (488)
-.....++++|+|.++++-.. +.|+.+++
T Consensus 369 ~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 369 QIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred cCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 134788999999776666654 77877764
No 221
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=1.4e-11 Score=109.65 Aligned_cols=170 Identities=18% Similarity=0.147 Sum_probs=126.4
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce---------e-eeeeccccccEEEEEecCCEEEEeecCCeEEEEEC
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER---------L-IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDV 311 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~---------~-~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~ 311 (488)
.+++.+++++....++++ +.+ .+.+|++...+ . ......+.. |+.++|+++.|+++ .++.|++||+
T Consensus 38 ~~~nlLais~~~gll~a~-~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAA-SGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp SCCBCEEEETTTTEEEEE-ETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEE-ESSEEEEEES
T ss_pred ccccEEEEcCCCCEEEEe-CCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEc
Confidence 368899999999999988 655 56679876433 1 111223555 99999998999998 8899999999
Q ss_pred cCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceeee--eecCCCCEEEEEccCCCCeEE
Q psy14511 312 RTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVP--KLKREGRELVTSHGKQDCSLK 388 (488)
Q Consensus 312 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~l~~~~g~~~~~i~ 388 (488)
++.. .......+..++.++.+.+.. ++++. ||.+.+||+.+..... +...+. +|+|+| +++ |..||+++
T Consensus 114 ~sl~-~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG--~~v--g~~dg~i~ 185 (388)
T 1xip_A 114 EELS-EFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ--LAV--LLKDRSFQ 185 (388)
T ss_dssp SSTT-CEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE--EEE--EETTSCEE
T ss_pred hhhh-ccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc--eEE--EEcCCcEE
Confidence 8754 444566777778888776553 66555 7999999999775433 222222 999999 455 67799999
Q ss_pred EEeCCCcce--eEEE------e---eccccEEEEEEcCCCCEEEEE
Q psy14511 389 MWEYPRLHL--IEEL------K---IHQERILSAVLSPDQTCVAAA 423 (488)
Q Consensus 389 i~d~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~l~t~ 423 (488)
+|+...++. ..++ . +|...|.++.|.+++.++++=
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 998877765 5556 2 367889999999999998873
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.38 E-value=2.1e-10 Score=102.16 Aligned_cols=294 Identities=11% Similarity=0.027 Sum_probs=166.9
Q ss_pred ceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeE
Q psy14511 6 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKA 85 (488)
Q Consensus 6 ~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~ 85 (488)
..|..++.++.|..|| .+++.. .....+...+.++...++|++.+ ++++ |..+|. +++.... ..........
T Consensus 31 g~l~v~t~~~~l~~~d-~~g~~~-~~~~~~~~~~~~~~~~~~g~l~v-~t~~-l~~~d~-~g~~~~~---~~~~~~~~~~ 102 (330)
T 3hxj_A 31 GTIYLGSSNKNLYAIN-TDGSVK-WFFKSGEIIECRPSIGKDGTIYF-GSDK-VYAINP-DGTEKWR---FDTKKAIVSD 102 (330)
T ss_dssp SCEECSSTTTTTEEEC-TTSCEE-ESSCGGGEEEECCEETTTTEECC-SSCE-EEEECC-CGGGGGG---SCC-----CC
T ss_pred CeEEEEcCCCEEEEEC-CCCcEE-EEEecCCCcccceEEecCCcEEE-ecCc-EEEECC-CCcEEEE---EECCCCcccC
Confidence 3556677788899999 777643 22334455678888888887555 4433 888886 3332221 2212222233
Q ss_pred EEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccc
Q psy14511 86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRT 165 (488)
Q Consensus 86 l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (488)
.... ++ .+.+... ++.+..+|.. ++............
T Consensus 103 ~~~~-~~-~l~v~t~---~~~l~~~d~~-g~~~~~~~~~~~~~------------------------------------- 139 (330)
T 3hxj_A 103 FTIF-ED-ILYVTSM---DGHLYAINTD-GTEKWRFKTKKAIY------------------------------------- 139 (330)
T ss_dssp EEEE-TT-EEEEECT---TSEEEEECTT-SCEEEEEECSSCCC-------------------------------------
T ss_pred ceEE-CC-EEEEEec---CCEEEEEcCC-CCEEEEEcCCCcee-------------------------------------
Confidence 3333 44 4555554 8899999987 66544433221100
Q ss_pred ccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCce
Q psy14511 166 VSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI 244 (488)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i 244 (488)
..+.. ..+.+++++.++.|..+|.. ++....... ....+
T Consensus 140 ------------------------------------~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~---~~~~~ 179 (330)
T 3hxj_A 140 ------------------------------------ATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKT---NDAIT 179 (330)
T ss_dssp ------------------------------------SCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEEC---SSCCC
T ss_pred ------------------------------------eeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEec---CCCce
Confidence 00111 24568888888999999998 776555554 33456
Q ss_pred EEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecC-CEEEEeecCCeEEEEECcCCCccceeeec
Q psy14511 245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG-NLLSCGTIGGNILHYDVRTHSDYPTAITR 323 (488)
Q Consensus 245 ~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 323 (488)
.++...+++. +.++ + +.|..+| .+++...........+.++..++ ..+..++.++.+..+|... . .......
T Consensus 180 ~~~~~d~~g~-l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g-~-~~~~~~~ 252 (330)
T 3hxj_A 180 SAASIGKDGT-IYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDG-T-EKWRFKT 252 (330)
T ss_dssp SCCEECTTCC-EEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTS-C-EEEEEEC
T ss_pred eeeEEcCCCE-EEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCC-C-EeEEeeC
Confidence 6677777765 5666 5 8899999 66666666655555566666643 3677777778888886432 2 2222222
Q ss_pred CCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee
Q psy14511 324 EGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI 403 (488)
Q Consensus 324 ~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~ 403 (488)
....+..+.+.+++.+.+ ++.++.+..+|. +++.+..+..
T Consensus 253 ~~~~~~~~~~~~~g~l~v---------------------------------------~t~~ggl~~~d~-~g~~~~~~~~ 292 (330)
T 3hxj_A 253 GKRIESSPVIGNTDTIYF---------------------------------------GSYDGHLYAINP-DGTEKWNFET 292 (330)
T ss_dssp SSCCCSCCEECTTSCEEE---------------------------------------ECTTCEEEEECT-TSCEEEEEEC
T ss_pred CCCccccceEcCCCeEEE---------------------------------------ecCCCCEEEECC-CCcEEEEEEc
Confidence 222122233333333222 233445555553 4554444444
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511 404 HQERILSAVLSPDQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 404 ~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
....+.++...++++ |..++.+|.+++...+..+
T Consensus 293 ~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 293 GSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp SSCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred CCccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 445566777777776 5568889999988766543
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.37 E-value=8.7e-10 Score=97.75 Aligned_cols=216 Identities=10% Similarity=0.007 Sum_probs=134.1
Q ss_pred CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccc-c-cccc
Q psy14511 5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQ-C-HLSA 82 (488)
Q Consensus 5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~-~-h~~~ 82 (488)
+.++.+...++.|.+||..+++.. .+ .....+.+++|+|+|+++++..+ .|.+||..+++.. .+.... . ....
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~--~~-~~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~-~~~~~~~~~~~~~ 135 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKT--VH-ALPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLT-LHAELESDLPGNR 135 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEE--EE-ECSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEE-EEECSSTTCTTEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEE--EE-ECCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEE-EEeeCCCCCCCCC
Confidence 556777777899999999876532 22 23457999999999998886644 4999998765432 121111 1 1246
Q ss_pred eeEEEEecCCCeEEeeeCCc-ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 83 VKAIAWCPWEPTLLATGGGI-CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 83 v~~l~~~~~~~~l~~~~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
+.++.++|+|+.+++..... ..+...+|.
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~-------------------------------------------------- 165 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRKAETGAGSIYH-------------------------------------------------- 165 (326)
T ss_dssp EEEEEECTTSCEEEEEEETTCCTTCEEEEE--------------------------------------------------
T ss_pred CCCEEECCCCCEEEEeCCCcCCCCceEEEE--------------------------------------------------
Confidence 88999999997544432200 001112222
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCC
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN 241 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~ 241 (488)
++ +++...... ..
T Consensus 166 -------------------------------------------------------------~~--~g~~~~~~~----~~ 178 (326)
T 2ghs_A 166 -------------------------------------------------------------VA--KGKVTKLFA----DI 178 (326)
T ss_dssp -------------------------------------------------------------EE--TTEEEEEEE----EE
T ss_pred -------------------------------------------------------------Ee--CCcEEEeeC----CC
Confidence 22 111111111 11
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECC--cc-e-----eeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ--EE-R-----LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDV 311 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~--~~-~-----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~ 311 (488)
.....++|+|+++.++++.+.++.|.+|++. ++ . ....+.........+.+ +|++.++...++.|..||.
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 2356899999999887774667899999985 44 2 12223223345567777 5676666666788999998
Q ss_pred cCCCccceeeecCCccEEEEEEc-cCCcEEEEEe
Q psy14511 312 RTHSDYPTAITREGDVVCGLKWS-PNGRYLASGS 344 (488)
Q Consensus 312 ~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~ 344 (488)
. + .....+..+...+.+++|+ |+++.|++++
T Consensus 259 ~-g-~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 259 D-G-NHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp T-C-CEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred C-C-CEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 4 3 3445555566679999998 8887776554
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.35 E-value=2.2e-09 Score=97.98 Aligned_cols=198 Identities=8% Similarity=0.019 Sum_probs=113.1
Q ss_pred CcEEEEECCC--eEEEEECCCCceEEEE-ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee----ec
Q psy14511 209 HDTLAVALDT--SVYTWNTKTNKTQLLV-EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK----LR 281 (488)
Q Consensus 209 ~~~~~~~~d~--~v~iw~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~----~~ 281 (488)
+.++++..++ .|.+++...+...... .........+.+++++|++..|+++ ..++.|+.||..++..... ..
T Consensus 183 ~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~~~~I~~~d~~~~~~~~~~~~~~~ 261 (409)
T 3hrp_A 183 QRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV-DSNKNFGRFNVKTQEVTLIKQLELS 261 (409)
T ss_dssp SEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE-CTTCEEEEEETTTCCEEEEEECCCC
T ss_pred CcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE-ECCCcEEEEECCCCCEEEEeccccc
Confidence 4456666544 7999998766543333 1111034567889999966677777 7789999999987653222 11
Q ss_pred ccccc--EEEEEec---CCEEEEeecCCeEEEEECcCCCccceeeecCC---------------ccEEEEEEccCCcEEE
Q psy14511 282 THMHQ--VIAMCWN---GNLLSCGTIGGNILHYDVRTHSDYPTAITREG---------------DVVCGLKWSPNGRYLA 341 (488)
Q Consensus 282 ~~~~~--v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~i~~~~~s~~~~~l~ 341 (488)
++... ...++++ +.++++-..++.|+.|+.... ...+.++. .....++++|+|++++
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyv 338 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYI 338 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEE
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEE
Confidence 21111 1266663 455556666788999987642 22222221 2366788888887666
Q ss_pred EEe-c-CeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCE
Q psy14511 342 SGS-N-NTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTC 419 (488)
Q Consensus 342 ~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 419 (488)
+-. . +.|+.|++.++. ....+ |.. +. +....+.. ....-.....++++|++.+
T Consensus 339 ad~~~~~~I~~~~~~~G~-----------------v~~~~-g~~-~~---~g~~~g~~---~~~~~~~P~giavd~~g~l 393 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDGY-----------------VSTVA-GQV-DV---ASQIDGTP---LEATFNYPYDICYDGEGGY 393 (409)
T ss_dssp EETTTTCEEEEEETTTTE-----------------EEEEE-ECT-TC---BSCCCBST---TTCCBSSEEEEEECSSSEE
T ss_pred EeCCCCCEEEEEECCCCE-----------------EEEEe-CCC-CC---CCcCCCCh---hceEeCCceEEEEcCCCCE
Confidence 554 4 667777654331 00000 100 00 00000000 0011245789999999888
Q ss_pred EEEEeCCCcEEEEecC
Q psy14511 420 VAAASADETISIWNCF 435 (488)
Q Consensus 420 l~t~~~dg~v~iw~~~ 435 (488)
+++-..++.|+.++++
T Consensus 394 yVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 394 WIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEESTTCEEEEEEEC
T ss_pred EEEECCCCeEEEEEeC
Confidence 8888888899887753
No 225
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=9.5e-10 Score=97.48 Aligned_cols=213 Identities=8% Similarity=-0.051 Sum_probs=138.5
Q ss_pred ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcccee
Q psy14511 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA 320 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 320 (488)
...+.+|+|++..++.....++.|..||..+++.. .+. ....+.++.+ +++++++ +. ..|.+||..++.. ...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~-~~-~gl~~~d~~~g~~-~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVL-TLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCE-EEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEE-EC-CCEEEEECCCCcE-EEE
Confidence 35678899987666666477889999999876543 232 2456888887 5666554 44 4499999876542 111
Q ss_pred eec----CCccEEEEEEccCCcEEEEEec-------CeEEEEECCCCCCCcccce----eeeeecCCCCEEEEEccCCCC
Q psy14511 321 ITR----EGDVVCGLKWSPNGRYLASGSN-------NTVKIWDFRQLDAKRPLGL----IVPKLKREGRELVTSHGKQDC 385 (488)
Q Consensus 321 ~~~----~~~~i~~~~~s~~~~~l~~~~d-------~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~l~~~~g~~~~ 385 (488)
... ....+..++++|+|+++++..+ +.|..++ +++....... ...+|+|+++.++++ ...++
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~-~~~~~ 201 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFV-DTKVN 201 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEE-ETTTC
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEE-ECCCC
Confidence 111 1245889999999997776542 3555555 3322111111 112889999988764 45678
Q ss_pred eEEEEeCC--Cc-ce-----eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc-ccccCCcceEEee-
Q psy14511 386 SLKMWEYP--RL-HL-----IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK-ARQVGSGSSLEFA- 455 (488)
Q Consensus 386 ~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~-~~~~~~v~~~~~s- 455 (488)
.|.+||+. ++ +. ...+......+..+++.++|+++++...++.|..|+. +++.... ......+.+++|+
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g 280 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIG 280 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEES
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEec
Confidence 99999985 55 32 2222223456788999999998887777789999998 4554432 2334468899998
Q ss_pred cCCCceEEE
Q psy14511 456 ILKQPVSLT 464 (488)
Q Consensus 456 ~~~~~~~~~ 464 (488)
|++..+.+.
T Consensus 281 ~d~~~L~vt 289 (326)
T 2ghs_A 281 PDASRLLVT 289 (326)
T ss_dssp TTSCEEEEE
T ss_pred CCCCEEEEE
Confidence 887766443
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.33 E-value=8.1e-10 Score=107.60 Aligned_cols=254 Identities=11% Similarity=0.004 Sum_probs=164.2
Q ss_pred CCCcEEEEECCCeEEEEECCCCceEEEEecC-CCCC-CceEE-EEEcCCCCeEEEEeC-----CCCcEEEEECCcceeee
Q psy14511 207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYP-TYDN-AYISC-VAWKPRTTDLAVTNT-----CTEYIDLWHEQEERLIQ 278 (488)
Q Consensus 207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~-~~i~~-~~~~~~~~~l~~~~~-----~~~~i~i~d~~~~~~~~ 278 (488)
.++.+++++.++.|..+|..+++..-.+... .... ..+.+ ... .+..++++.+ .++.|+.+|..+++.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 3567888889999999999999987776653 1000 11111 111 2345666522 26899999999998887
Q ss_pred eecccccc--------------------------------EEEEEe--cCCEEEEeecCC-------------------e
Q psy14511 279 KLRTHMHQ--------------------------------VIAMCW--NGNLLSCGTIGG-------------------N 305 (488)
Q Consensus 279 ~~~~~~~~--------------------------------v~~~~~--~~~~l~~~~~dg-------------------~ 305 (488)
.+...... ...+++ ++..++.+..++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 66432111 012344 567888776654 5
Q ss_pred EEEEECcCCCccceeee-cCC-------ccEEEEEEccCC---cEEEEEe-cCeEEEEECCCCCCCcccce---------
Q psy14511 306 ILHYDVRTHSDYPTAIT-REG-------DVVCGLKWSPNG---RYLASGS-NNTVKIWDFRQLDAKRPLGL--------- 364 (488)
Q Consensus 306 i~i~d~~~~~~~~~~~~-~~~-------~~i~~~~~s~~~---~~l~~~~-d~~i~iwd~~~~~~~~~~~~--------- 364 (488)
|..+|..+++..-.... .|. ....-+....+| ..++.++ +|.++++|..+++.......
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 99999998764332222 121 112223444577 5777777 59999999998865322110
Q ss_pred -------------------e------------eeeecCCCCEEEEEccC-------------------------------
Q psy14511 365 -------------------I------------VPKLKREGRELVTSHGK------------------------------- 382 (488)
Q Consensus 365 -------------------~------------~~~~~~~~~~l~~~~g~------------------------------- 382 (488)
. ..+++|++..+++....
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 0 12678888888774220
Q ss_pred ----------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc--ccCCcc
Q psy14511 383 ----------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR--QVGSGS 450 (488)
Q Consensus 383 ----------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~--~~~~v~ 450 (488)
..+.|..||+.+++.+.++. +..++....++.++..++.++.||.+++||..+++.+.... ......
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~ 523 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAA 523 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccC
Confidence 12789999999999988876 34445566677788899999999999999999999885433 223334
Q ss_pred eEEeecCCCceEE
Q psy14511 451 SLEFAILKQPVSL 463 (488)
Q Consensus 451 ~~~~s~~~~~~~~ 463 (488)
-+.|.++|+.+..
T Consensus 524 p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 524 PSTYMVDGRQYVS 536 (677)
T ss_dssp CEEEEETTEEEEE
T ss_pred CEEEEeCCEEEEE
Confidence 5666777776543
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.31 E-value=4.3e-10 Score=110.55 Aligned_cols=221 Identities=11% Similarity=0.118 Sum_probs=144.7
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCC----CcEEEEECCcceeeee-eccccccEEEEEe-cCCEEEEeecCC---------
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCT----EYIDLWHEQEERLIQK-LRTHMHQVIAMCW-NGNLLSCGTIGG--------- 304 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~----~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~-~~~~l~~~~~dg--------- 304 (488)
+...+..++|||||++++.+.+.. ..|+++|+.+++.+.. +.... ...++| |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k--~~~~~WsDg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVK--FSGISWLGNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEE--SCCCEEETTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCce--eccEEEeCCCEEEEEEecCccccccccc
Confidence 445688899999999999763333 4799999999876543 22111 123344 888888887774
Q ss_pred ----eEEEEECcCCCccceee---ec-CCccEEEEEEccCCcEEEEEe--c---CeEEEEECCCCCC-Cccccee----e
Q psy14511 305 ----NILHYDVRTHSDYPTAI---TR-EGDVVCGLKWSPNGRYLASGS--N---NTVKIWDFRQLDA-KRPLGLI----V 366 (488)
Q Consensus 305 ----~i~i~d~~~~~~~~~~~---~~-~~~~i~~~~~s~~~~~l~~~~--d---~~i~iwd~~~~~~-~~~~~~~----~ 366 (488)
.|++|++.+.......+ .. +......+.|+|||++|+... + +.++++|+.+.+. ...+... .
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 49999998754322222 22 344577899999999886544 2 5899999976531 1222111 1
Q ss_pred eeecCCCCEEEEEccCC--CCeEEEEeCCCcce--eEEEeeccccEEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCc
Q psy14511 367 PKLKREGRELVTSHGKQ--DCSLKMWEYPRLHL--IEELKIHQERILSAVLSPDQTCVAAASADE---TISIWNCFPRDK 439 (488)
Q Consensus 367 ~~~~~~~~~l~~~~g~~--~~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg---~v~iw~~~~~~~ 439 (488)
..++++|..++..+... .+.|..+|+.+++. ...+..|...+. .|++++++|+....++ .|++|++..+..
T Consensus 285 ~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~ 362 (693)
T 3iuj_A 285 SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV 362 (693)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE
T ss_pred EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee
Confidence 14778888777653322 47899999987654 345666666555 8999999888776544 689999886544
Q ss_pred ccc-ccccCCcceEEeecCCCceEEE
Q psy14511 440 KRK-ARQVGSGSSLEFAILKQPVSLT 464 (488)
Q Consensus 440 ~~~-~~~~~~v~~~~~s~~~~~~~~~ 464 (488)
... ....+.+..+.+++++..+.+.
T Consensus 363 ~~l~~p~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 363 REVALPGLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp EEECCSSSSEEEECCCCTTCSCEEEE
T ss_pred EEeecCCCceEEeeecCCCCCEEEEE
Confidence 332 2233456677778887776543
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.28 E-value=2.1e-09 Score=95.85 Aligned_cols=244 Identities=15% Similarity=0.132 Sum_probs=157.0
Q ss_pred eEEEEECCC-----CceEEEEecCCCCCCceEEEEE-----------c--CCCCeEEEEeCCCCcEEEEECCcc----ee
Q psy14511 219 SVYTWNTKT-----NKTQLLVEYPTYDNAYISCVAW-----------K--PRTTDLAVTNTCTEYIDLWHEQEE----RL 276 (488)
Q Consensus 219 ~v~iw~~~~-----~~~~~~~~~~~~~~~~i~~~~~-----------~--~~~~~l~~~~~~~~~i~i~d~~~~----~~ 276 (488)
.|.+.|++. ++.+....++. .........| + +++++|++.+..++.|.++|+.+. +.
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~-~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~ 122 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPY-INDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKI 122 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSS-SCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEE
T ss_pred eEEEEECCCCCCCcceEEEEEECCC-CCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCcee
Confidence 466677765 66666666654 3333444444 7 889999998888999999998754 55
Q ss_pred eeeecc-------ccccEEEEEe--cCCEEEEeecC------CeEEEEECcCCCccceeeecCC---ccEEEEEEccCCc
Q psy14511 277 IQKLRT-------HMHQVIAMCW--NGNLLSCGTIG------GNILHYDVRTHSDYPTAITREG---DVVCGLKWSPNGR 338 (488)
Q Consensus 277 ~~~~~~-------~~~~v~~~~~--~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~---~~i~~~~~s~~~~ 338 (488)
...++. ....-..+.. ++ +++++..+ |.|.++|..+.+ .+..+.... .--+.+.|+|+++
T Consensus 123 ~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~-v~~~~~~~~~~~~~~Yd~~~~p~~~ 200 (462)
T 2ece_A 123 IKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE-PLGKWEIDRGDQYLAYDFWWNLPNE 200 (462)
T ss_dssp EEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC-EEEECCSBCTTCCCCCCEEEETTTT
T ss_pred eeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe-EEEEEccCCCCccccceEEECCCCC
Confidence 555520 1112222333 66 66665555 789999998764 444443221 2234578899999
Q ss_pred EEEEEe--------------------cCeEEEEECCCCCCCccccee----ee-----eecCCCCEEEEEccC-----CC
Q psy14511 339 YLASGS--------------------NNTVKIWDFRQLDAKRPLGLI----VP-----KLKREGRELVTSHGK-----QD 384 (488)
Q Consensus 339 ~l~~~~--------------------d~~i~iwd~~~~~~~~~~~~~----~~-----~~~~~~~~l~~~~g~-----~~ 384 (488)
.+++.. ..+|.+||+.+.+..+.+..- .. +|+|++++++++ .. .+
T Consensus 201 ~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~-~e~~~~~Ls 279 (462)
T 2ece_A 201 VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFIN-MVVSLKDLS 279 (462)
T ss_dssp EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEE-EEEETTTCC
T ss_pred EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEE-EeeeccCCC
Confidence 988884 489999999986544433331 11 469999999885 33 56
Q ss_pred CeEEEEeCCCcce--eEEE--eec----------------cccEEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCcc---
Q psy14511 385 CSLKMWEYPRLHL--IEEL--KIH----------------QERILSAVLSPDQTCVAAASA-DETISIWNCFPRDKK--- 440 (488)
Q Consensus 385 ~~i~i~d~~~~~~--~~~~--~~~----------------~~~v~~~~~s~~~~~l~t~~~-dg~v~iw~~~~~~~~--- 440 (488)
++|.+|....++. .+.+ ... ......+.+||||++|.++.. .+.|.++|+......
T Consensus 280 s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv 359 (462)
T 2ece_A 280 SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLT 359 (462)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEE
T ss_pred ceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE
Confidence 7887766544321 1111 110 134788999999999887764 689999999643222
Q ss_pred cccccc---------------CCcceEEeecCCCceEEEEe
Q psy14511 441 RKARQV---------------GSGSSLEFAILKQPVSLTAL 466 (488)
Q Consensus 441 ~~~~~~---------------~~v~~~~~s~~~~~~~~~~~ 466 (488)
...... +....++++|||+.+.....
T Consensus 360 ~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 360 GKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp EEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred EEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 222122 13688999999999877663
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.27 E-value=2.6e-09 Score=93.84 Aligned_cols=76 Identities=12% Similarity=-0.013 Sum_probs=52.2
Q ss_pred eeecccCceEEEEEEccCCcE-EEEec-CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceE
Q psy14511 30 TAITREGDVVCGLKWSPNGRY-LASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTV 107 (488)
Q Consensus 30 ~~~~~h~~~V~~l~~sp~g~~-las~~-d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i 107 (488)
+.+..+......+.|+|+|+. +++.. ++.|..|+.. ++ ...+..+...+..++++++|+ ++++... ++.|
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~----~~~~~~~~~~~~gl~~d~dG~-l~v~~~~--~~~v 109 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT----VDVLLDATAFTNGNAVDAQQR-LVHCEHG--RRAI 109 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC----EEEEEESCSCEEEEEECTTSC-EEEEETT--TTEE
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC----EEEEeCCCCccceeeECCCCC-EEEEECC--CCEE
Confidence 344445556788999999994 45554 8999999873 32 122334556789999999997 4444432 6789
Q ss_pred EEEecC
Q psy14511 108 RLWNSM 113 (488)
Q Consensus 108 ~vwd~~ 113 (488)
.+|+..
T Consensus 110 ~~~~~~ 115 (305)
T 3dr2_A 110 TRSDAD 115 (305)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999874
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.26 E-value=3e-08 Score=85.15 Aligned_cols=250 Identities=9% Similarity=0.054 Sum_probs=149.3
Q ss_pred CceEEEeecCCeEEEEEcccCccc----ceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccc
Q psy14511 5 GNLLSCGTIGGNILHYDVRTHSDY----PTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQC 78 (488)
Q Consensus 5 g~~la~g~~dg~i~iwd~~~~~~~----~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~ 78 (488)
|.+|..+. .+.|+.+++...... ...+.........++|+|+++.|..+. ++.|.+++..+... ..+ ...
T Consensus 1 ~~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~--~~~ 76 (267)
T 1npe_A 1 GTHLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTI--IRQ 76 (267)
T ss_dssp CEEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEE--ECT
T ss_pred CcEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEE--EEC
Confidence 45666665 358999998765421 112222234578999999776666554 78999999875322 111 111
Q ss_pred cccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccce
Q psy14511 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKV 158 (488)
Q Consensus 79 h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (488)
.......+++.+++..++.+... .+.|.+++++.... ..+.....
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~-~~~~~~~~-------------------------------- 121 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQR-RVLFDTGL-------------------------------- 121 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSC-EEEECSSC--------------------------------
T ss_pred CCCCccEEEEEecCCeEEEEECC--CCEEEEEEcCCCCE-EEEEECCC--------------------------------
Confidence 22467899999987778777663 78899998753221 11110000
Q ss_pred eccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC--CCcEEEEEC---CCeEEEEECCCCceEEE
Q psy14511 159 LNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG--YHDTLAVAL---DTSVYTWNTKTNKTQLL 233 (488)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---d~~v~iw~~~~~~~~~~ 233 (488)
.....+.++ .+.++.+.. .+.|..+++........
T Consensus 122 ----------------------------------------~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 122 ----------------------------------------VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp ----------------------------------------SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred ----------------------------------------CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 000112222 244555543 36788888765433222
Q ss_pred EecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEEEee-cCCeEEEEECc
Q psy14511 234 VEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGT-IGGNILHYDVR 312 (488)
Q Consensus 234 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~ 312 (488)
... .......++++|+++.|+++....+.|..+|.........+.. ......++.++..++.+. .++.|..+|..
T Consensus 162 ~~~---~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 162 AQD---NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ECT---TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEC---CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 221 2346789999999888887757778999999986544333332 223356677665555554 56899999998
Q ss_pred CCCccceeeecCC-ccEEEEEEccCCc
Q psy14511 313 THSDYPTAITREG-DVVCGLKWSPNGR 338 (488)
Q Consensus 313 ~~~~~~~~~~~~~-~~i~~~~~s~~~~ 338 (488)
+++ ....+.... .....+++.|++.
T Consensus 238 ~g~-~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 238 ISK-EMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTE-EEEEECCSSCCCCCCEEEECSCC
T ss_pred CCC-ceEEEccccccccceeeecCccC
Confidence 764 344443322 2356788888764
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.25 E-value=2.8e-09 Score=104.02 Aligned_cols=274 Identities=14% Similarity=0.112 Sum_probs=160.0
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecc-cCceEEEEEEcc---CCcEEEEec------CCeEEEEeccccCcCCCc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITR-EGDVVCGLKWSP---NGRYLASGS------NNTVKIWDFRQLDAKRPQ 73 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~-h~~~V~~l~~sp---~g~~las~~------d~~i~vwd~~~~~~~~~~ 73 (488)
++..|++++.|+.|..+|..+++.+-..-.. +......+..+| ++..++..+ ++.|..||.++++..-..
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 3556777888999999999999865443322 211111122233 565555432 589999999887643222
Q ss_pred cccc----------------------------ccccceeEEEEecCCCeEEeeeCCcccc-------------------e
Q psy14511 74 VNNQ----------------------------CHLSAVKAIAWCPWEPTLLATGGGICDQ-------------------T 106 (488)
Q Consensus 74 ~~~~----------------------------~h~~~v~~l~~~~~~~~l~~~~~~~~d~-------------------~ 106 (488)
.... ++......+++.|++..+++... ++ .
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~---~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVG---NGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECC---CEESSCHHHHHTTCSCCTTTTE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCC---CCCccccCCCCCCCCCceeeee
Confidence 1100 11111236788888776655544 54 3
Q ss_pred EEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCC
Q psy14511 107 VRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKP 186 (488)
Q Consensus 107 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
|..||..+|+.+..+.............. ..
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~------~~------------------------------------------- 307 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQ------HM------------------------------------------- 307 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCS------CE-------------------------------------------
T ss_pred EEEEEccCCceeEeeecCCcccccccCCC------Cc-------------------------------------------
Confidence 89999999988776654322111000000 00
Q ss_pred ceeecCCCccccceeeeeeeCC---CcEEEEECCCeEEEEECCCCceEEEEecCCC------------------------
Q psy14511 187 ERILEAPSIINDFYTSGLDWGY---HDTLAVALDTSVYTWNTKTNKTQLLVEYPTY------------------------ 239 (488)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~------------------------ 239 (488)
....+...+ ..++.+..+|.++++|..+++.+....+...
T Consensus 308 -------------~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~ 374 (689)
T 1yiq_A 308 -------------ILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWK 374 (689)
T ss_dssp -------------EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTT
T ss_pred -------------EEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccC
Confidence 000001111 1355666899999999999987644332110
Q ss_pred -CC-----------CceEEEEEcCCCCeEEEEeC--------------------------------------------CC
Q psy14511 240 -DN-----------AYISCVAWKPRTTDLAVTNT--------------------------------------------CT 263 (488)
Q Consensus 240 -~~-----------~~i~~~~~~~~~~~l~~~~~--------------------------------------------~~ 263 (488)
.. ..-..++++|+...+++... .+
T Consensus 375 ~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 454 (689)
T 1yiq_A 375 NGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWS 454 (689)
T ss_dssp SSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCE
T ss_pred CCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcc
Confidence 00 00113688888887776511 13
Q ss_pred CcEEEEECCcceeeeeeccccccE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEE
Q psy14511 264 EYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS 342 (488)
Q Consensus 264 ~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 342 (488)
|.|..||+.+++.+..+..+.... ..+...+.+++.++.||.++.||.++++........+.....-+.|..+|+..+.
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 789999999999888876544222 1344478899999999999999999986443333333222234667788874443
No 232
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.24 E-value=1.5e-06 Score=87.06 Aligned_cols=373 Identities=8% Similarity=0.028 Sum_probs=218.4
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc----cccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN----NQCH 79 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~----~~~h 79 (488)
+|++.+ |+.++-+..||..+++........+...|.++...++|++.+...++-+.+||..+.+....... ..-.
T Consensus 183 ~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~ 261 (795)
T 4a2l_A 183 GDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSIS 261 (795)
T ss_dssp TTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCS
T ss_pred CCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccC
Confidence 454444 55554588899876653211112235679999999999877765554588898765322111100 0012
Q ss_pred ccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecccccee
Q psy14511 80 LSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVL 159 (488)
Q Consensus 80 ~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (488)
...|.++...++|...+.+ . + -|.+|+..++........... ..
T Consensus 262 ~~~i~~i~~d~~g~lWigt-~---~-Gl~~~~~~~~~~~~~~~~~~~-~~------------------------------ 305 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGT-F---N-DLNIYHEGTDSFASYSSNPVE-NG------------------------------ 305 (795)
T ss_dssp CSBEEEEEECTTSCEEEEE-S---S-CEEEEETTTTEEEEECCCTTS-TT------------------------------
T ss_pred CCeEEEEEEcCCCCEEEEe-C---C-hhheEcCCCCeEEEEecCCCC-CC------------------------------
Confidence 3579999998888644433 2 4 688999876653321111000 00
Q ss_pred ccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceEEEEecC-
Q psy14511 160 NQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQLLVEYP- 237 (488)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~- 237 (488)
......+.++.. ..+.+.+++.++-|..|+..++.........
T Consensus 306 -----------------------------------~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~ 350 (795)
T 4a2l_A 306 -----------------------------------SLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPY 350 (795)
T ss_dssp -----------------------------------SCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTT
T ss_pred -----------------------------------CCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCC
Confidence 000011222222 2467888888889999987766544332211
Q ss_pred --CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--------cccccEEEEEec--CCEEEEeecCCe
Q psy14511 238 --TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--------THMHQVIAMCWN--GNLLSCGTIGGN 305 (488)
Q Consensus 238 --~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~--~~~l~~~~~dg~ 305 (488)
+.....|.++...++|+.. ++ +.++.|..|+..+++...... .....|.++..+ ++.|..|+.++-
T Consensus 351 ~~~l~~~~V~~i~~d~~g~lW-iG-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~G 428 (795)
T 4a2l_A 351 KNSLSDNVVSCIVEDKDKNLW-IG-TNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGG 428 (795)
T ss_dssp SSSCSCSSEEEEEECTTSCEE-EE-ESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTE
T ss_pred CCCCCCCeeEEEEECCCCCEE-EE-ECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCc
Confidence 1134569999998888654 45 577789999987654432221 123568888874 454788888788
Q ss_pred EEEEECcCCCccceeee-----cCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccc---------eeee--ee
Q psy14511 306 ILHYDVRTHSDYPTAIT-----REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLG---------LIVP--KL 369 (488)
Q Consensus 306 i~i~d~~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~---------~~~~--~~ 369 (488)
|..||..++. ...+. .....|.++...++|++.+... +.+.+||..+........ ..+. ..
T Consensus 429 l~~~d~~~~~--~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 505 (795)
T 4a2l_A 429 LSILHRNSGQ--VENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFR 505 (795)
T ss_dssp EEEEETTTCC--EEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEE
T ss_pred eeEEeCCCCc--EEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEE
Confidence 9999987653 22221 2345689999999888766555 568889987643211110 1122 45
Q ss_pred cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-------eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc
Q psy14511 370 KREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-------IHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK 442 (488)
Q Consensus 370 ~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~ 442 (488)
.++|+..+.+ . +.+..||..+++. .+. .+...|.++...++|++.+... . -|..||..+++....
T Consensus 506 d~~g~lWigt---~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~ 577 (795)
T 4a2l_A 506 DSHKRLWIGG---E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRY 577 (795)
T ss_dssp CTTCCEEEEE---S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEE
T ss_pred CCCCCEEEEe---C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEe
Confidence 5667766652 2 4588898876654 222 1345799999999998666544 3 578888776654322
Q ss_pred cc----ccCCcceEEeecCCCce
Q psy14511 443 AR----QVGSGSSLEFAILKQPV 461 (488)
Q Consensus 443 ~~----~~~~v~~~~~s~~~~~~ 461 (488)
.. ....+.++...++|...
T Consensus 578 ~~~~gl~~~~i~~i~~d~~g~lW 600 (795)
T 4a2l_A 578 NTTNGLPNNVVYGILEDSFGRLW 600 (795)
T ss_dssp CGGGTCSCSCEEEEEECTTSCEE
T ss_pred CCCCCCchhheEEEEECCCCCEE
Confidence 11 12345666666655543
No 233
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.24 E-value=2.1e-09 Score=94.45 Aligned_cols=215 Identities=10% Similarity=0.081 Sum_probs=137.9
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCcc
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDY 317 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 317 (488)
.........|+|+++.|+.....++.|..|+.. ++ ...+..+...+..+.+ +|+++++...++.|..|+.. +. .
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~ 118 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-A 118 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-E
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-E
Confidence 344577899999999666654788999999984 33 3444445667788888 57766665566889999985 32 2
Q ss_pred ceeeecC----CccEEEEEEccCCcEEEE----Ee--------------cCeEEEEECCCCCCCccccee----eeeecC
Q psy14511 318 PTAITRE----GDVVCGLKWSPNGRYLAS----GS--------------NNTVKIWDFRQLDAKRPLGLI----VPKLKR 371 (488)
Q Consensus 318 ~~~~~~~----~~~i~~~~~s~~~~~l~~----~~--------------d~~i~iwd~~~~~~~~~~~~~----~~~~~~ 371 (488)
....... ...+..++++|+|+++++ +. .+.|..+|..+++..... .. -.+|+|
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~sp 197 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSP 197 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECT
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcC
Confidence 1111111 123567999999998886 22 145777777655433222 11 128999
Q ss_pred CCCEEEEEccCC----CCeEEEEeCCCcceeEE---E-eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccc
Q psy14511 372 EGRELVTSHGKQ----DCSLKMWEYPRLHLIEE---L-KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKA 443 (488)
Q Consensus 372 ~~~~l~~~~g~~----~~~i~i~d~~~~~~~~~---~-~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~ 443 (488)
|++.|+++.... .+.|++|++..+. +.. + .........+++.++|++.++. .+| |.+|+.. ++.....
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~g-v~~~~~~-g~~~~~~ 273 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTG-VCVFDSD-GQLLGHI 273 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-SSE-EEEECTT-SCEEEEE
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-CCc-EEEECCC-CCEEEEE
Confidence 999887752211 3789999987544 211 1 1123345678999999955544 454 9999984 4444333
Q ss_pred cccCCcceEEeecCCCceEE
Q psy14511 444 RQVGSGSSLEFAILKQPVSL 463 (488)
Q Consensus 444 ~~~~~v~~~~~s~~~~~~~~ 463 (488)
.....+.+++|+|+++.+.+
T Consensus 274 ~~~~~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 274 PTPGTASNCTFDQAQQRLFI 293 (305)
T ss_dssp ECSSCCCEEEECTTSCEEEE
T ss_pred ECCCceeEEEEeCCCCEEEE
Confidence 33446899999988876644
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.24 E-value=1.5e-09 Score=100.31 Aligned_cols=227 Identities=15% Similarity=0.143 Sum_probs=151.8
Q ss_pred CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEE-c-CCCCeEEEEe-----------------CCCCcEEE
Q psy14511 209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW-K-PRTTDLAVTN-----------------TCTEYIDL 268 (488)
Q Consensus 209 ~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~l~~~~-----------------~~~~~i~i 268 (488)
..+++.. .++.|.+.|+.+.++..+++++ ....+..+++ + |+++++++++ ..++.+.+
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip--~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCDAILEIP--NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS--SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceEeeEEeCC--CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 4455544 6778999999999998888775 3446888887 5 9999998883 22457889
Q ss_pred EECCcceeeeeecc-ccccEEEEEecCCEEEEeecCC--------------------------------------eEEEE
Q psy14511 269 WHEQEERLIQKLRT-HMHQVIAMCWNGNLLSCGTIGG--------------------------------------NILHY 309 (488)
Q Consensus 269 ~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg--------------------------------------~i~i~ 309 (488)
.|..+.+...++.- ....-..++.+|+++++.+.+. .|.+.
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 99998877777652 1222234444677776666442 36677
Q ss_pred ECcC--CCccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCC------------Ccc----cceeeeee
Q psy14511 310 DVRT--HSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDA------------KRP----LGLIVPKL 369 (488)
Q Consensus 310 d~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~------------~~~----~~~~~~~~ 369 (488)
|.++ +......+.... ...++.++|||+++++++ +.++.++|+.+.+. ... ......+|
T Consensus 260 D~~~~~~~~~~~~Ipvg~-~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF 338 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF 338 (595)
T ss_dssp ECSGGGCCSSEEEEEEES-SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEE
T ss_pred eCcccCCceeEEEEecCC-CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEE
Confidence 7766 322123333222 345799999999999888 39999999986521 001 11122399
Q ss_pred cCCCCEEEEEccCCCCeEEEEeCCC----------cceeEEEeeccccE-----EEEEEcCCCCEEEEEeC---CCc---
Q psy14511 370 KREGRELVTSHGKQDCSLKMWEYPR----------LHLIEELKIHQERI-----LSAVLSPDQTCVAAASA---DET--- 428 (488)
Q Consensus 370 ~~~~~~l~~~~g~~~~~i~i~d~~~----------~~~~~~~~~~~~~v-----~~~~~s~~~~~l~t~~~---dg~--- 428 (488)
+|+| .++++ ...+++|.+||+.+ .+.+.++.-|-.+- ..+.++|||++|+++.. |..
T Consensus 339 ~~dG-~aY~t-~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~ 416 (595)
T 1fwx_A 339 DGRG-NAYTS-LFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNV 416 (595)
T ss_dssp CTTS-EEEEE-ETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCC
T ss_pred CCCC-eEEEE-EecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccC
Confidence 9999 55554 68899999999977 56677776664432 22356899999998753 432
Q ss_pred -------EEEEecCCCCcc
Q psy14511 429 -------ISIWNCFPRDKK 440 (488)
Q Consensus 429 -------v~iw~~~~~~~~ 440 (488)
-.++|+..++..
T Consensus 417 gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 417 GPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp CSSCCEEEEEEECSSSSCE
T ss_pred CCCCCCcceEEEcCCCcEE
Confidence 288999655543
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=1.1e-09 Score=98.01 Aligned_cols=252 Identities=11% Similarity=-0.006 Sum_probs=143.5
Q ss_pred cCCceEEEee--cCCeEEEEEcccCcccc-----eeecccCceEEEEEEccCCcEEEEec------CCeEEEEeccccCc
Q psy14511 3 WNGNLLSCGT--IGGNILHYDVRTHSDYP-----TAITREGDVVCGLKWSPNGRYLASGS------NNTVKIWDFRQLDA 69 (488)
Q Consensus 3 ~dg~~la~g~--~dg~i~iwd~~~~~~~~-----~~~~~h~~~V~~l~~sp~g~~las~~------d~~i~vwd~~~~~~ 69 (488)
.||+++++.. .++.+.||.+.+++..+ ....+|...+..++++|+|+++++-. +..|.+||+.+++.
T Consensus 26 ~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~ 105 (343)
T 2qe8_A 26 PDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQL 105 (343)
T ss_dssp TTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeE
Confidence 4788888753 23435566655433110 01123556899999999998777643 47999999987653
Q ss_pred CCCccc---ccccccceeEEEEecCCCeEEeeeC---CcccceEEEEecCCCeeeeeeecCCCccc-cccccccccccce
Q psy14511 70 KRPQVN---NQCHLSAVKAIAWCPWEPTLLATGG---GICDQTVRLWNSMNGKEKCHVKTDSQQAN-DETISYREQKKRR 142 (488)
Q Consensus 70 ~~~~~~---~~~h~~~v~~l~~~~~~~~l~~~~~---~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 142 (488)
.+.+.. ...+...+..+++++++..++++.. . ++.|.+||+.+++..+.+..+..... ...+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~--~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~------- 176 (343)
T 2qe8_A 106 SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD--KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI------- 176 (343)
T ss_dssp EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG--GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE-------
T ss_pred EEEEECChhhcccccccceEEEecCCCEEEEEcCccCC--CCeEEEEECCCCCEEEEecCCCcccccccceeE-------
Confidence 222211 1123345789999987656666543 2 78999999988876544432100000 000000
Q ss_pred eEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCCeEEE
Q psy14511 143 HLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYT 222 (488)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 222 (488)
.+..+.....++.+..
T Consensus 177 ----------------------------------------------------------------~g~~~~~~~~~g~~~~ 192 (343)
T 2qe8_A 177 ----------------------------------------------------------------DGVPVQIGQPDGTVIR 192 (343)
T ss_dssp ----------------------------------------------------------------TTEECBEECTTSCEEC
T ss_pred ----------------------------------------------------------------CCEEEEeccCCCceec
Confidence 0011112223344332
Q ss_pred EECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc---c-----eeee--eeccccccEEEEEe
Q psy14511 223 WNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE---E-----RLIQ--KLRTHMHQVIAMCW 292 (488)
Q Consensus 223 w~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~---~-----~~~~--~~~~~~~~v~~~~~ 292 (488)
|. ..+..++++|+++.|+++......+..++... + +... ...++......+++
T Consensus 193 ~~-----------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 193 PH-----------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp CC-----------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ee-----------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 21 23678999999999988833344555554321 0 0000 11122223344566
Q ss_pred --cCCEEEEeecCCeEEEEECcCCCccceeee-cCCccEEEEEEccCCcEEEEEec
Q psy14511 293 --NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-REGDVVCGLKWSPNGRYLASGSN 345 (488)
Q Consensus 293 --~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~d 345 (488)
+|+++++...++.|.+||..+++ ...... .+-..+.+++|.++++++++.+.
T Consensus 256 d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp CTTCCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 68888888889999999984432 222222 12345889999999988877764
No 236
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.20 E-value=1.4e-06 Score=87.27 Aligned_cols=372 Identities=11% Similarity=0.045 Sum_probs=215.3
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeeccc-Cce-EEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccccccccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE-GDV-VCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLS 81 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h-~~~-V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~ 81 (488)
+|++.+ ++. +-+..||..+++.. ....++ ... |.++...++|++.+...++.|..|+..+.+..... ...+..
T Consensus 141 ~g~lwi-~t~-~gl~~~~~~~~~~~-~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~--~~~~~~ 215 (795)
T 4a2l_A 141 PEQLLI-STP-EGLIMFDIKESKFI-DDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVI--PILGTK 215 (795)
T ss_dssp TTEEEE-EET-TEEEEEETTTTEEE-CSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC------CC
T ss_pred CCCEEE-EEC-CceEEEECCCCEEE-eccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEec--CCCCCC
Confidence 455444 343 45888987665421 111111 123 88999999998777544556888987654322111 112346
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
.|.++...+++...+.+. ++-+..||..+++..........+
T Consensus 216 ~i~~i~~d~~g~lwigt~----~~Gl~~~~~~~~~~~~~~~~~~~~---------------------------------- 257 (795)
T 4a2l_A 216 QIQAILQQSPTRIWVATE----GAGLFLINPKTKEIKNYLHSPSNP---------------------------------- 257 (795)
T ss_dssp CEEEEEEEETTEEEEEEB----SSCEEEEETTTTEEEEECCCTTCT----------------------------------
T ss_pred eeEEEEEcCCCCEEEEEC----CCCeEEEeCCCCeEEEeecCCCCc----------------------------------
Confidence 788998888886544443 445888998766533211100000
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeC-CCcEEEEECCCeEEEEECCCCceEEEEecC---
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWG-YHDTLAVALDTSVYTWNTKTNKTQLLVEYP--- 237 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~--- 237 (488)
.......+.++..+ .+.+.+++.+ -|.+|+..+++.......+
T Consensus 258 --------------------------------~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~ 304 (795)
T 4a2l_A 258 --------------------------------KSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVEN 304 (795)
T ss_dssp --------------------------------TSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTST
T ss_pred --------------------------------cccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCC
Confidence 00000112223332 4678888766 6899998887765443211
Q ss_pred -CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec------cccccEEEEEec-CCEEEEeecCCeEEEE
Q psy14511 238 -TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR------THMHQVIAMCWN-GNLLSCGTIGGNILHY 309 (488)
Q Consensus 238 -~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~------~~~~~v~~~~~~-~~~l~~~~~dg~i~i~ 309 (488)
......|.++...++|... ++ +.++.|..++........... .....|.++..| ...|..|+.++-|..|
T Consensus 305 ~~l~~~~i~~i~~D~~g~lW-ig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~ 382 (795)
T 4a2l_A 305 GSLSQRSVRSIFMDSQGGMW-LG-TYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLY 382 (795)
T ss_dssp TSCSSSCEEEEEECTTSCEE-EE-ESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEE
T ss_pred CCCCCCcEEEEEEeCCcCEE-EE-ECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEE
Confidence 1134679999999988655 45 567778889876543221111 124568888884 4567778888789999
Q ss_pred ECcCCCccceeee--------cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccc-------ceeee--eecC
Q psy14511 310 DVRTHSDYPTAIT--------REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL-------GLIVP--KLKR 371 (488)
Q Consensus 310 d~~~~~~~~~~~~--------~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~-------~~~~~--~~~~ 371 (488)
|..++. ...... .....|.++...++|+.|..|+ ++.+..||..+++..... ...+. ...+
T Consensus 383 ~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 461 (795)
T 4a2l_A 383 NPITQR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG 461 (795)
T ss_dssp CTTTCC-EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS
T ss_pred cCCCCc-EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC
Confidence 987643 111111 1235689999999998444555 578999998765422110 01122 3445
Q ss_pred CCCEEEEEccCCCCeEEEEeCCCcceeEEEee------ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc---
Q psy14511 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEELKI------HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK--- 442 (488)
Q Consensus 372 ~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~--- 442 (488)
+|+..+.+ . +.+.+||..+++....... +...|.++...++|++.+... +-|..|+..+++. ..
T Consensus 462 ~g~lwigt---~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~ 534 (795)
T 4a2l_A 462 EGNLWLGT---L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASI 534 (795)
T ss_dssp SSCEEEEE---S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCC
T ss_pred CCCEEEEe---c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecC
Confidence 66665552 2 4588999887654322111 235799999999998776554 4588888876543 11
Q ss_pred ----ccccCCcceEEeecCCCce
Q psy14511 443 ----ARQVGSGSSLEFAILKQPV 461 (488)
Q Consensus 443 ----~~~~~~v~~~~~s~~~~~~ 461 (488)
......+.++...+++...
T Consensus 535 ~~~~~l~~~~i~~i~~d~~g~lW 557 (795)
T 4a2l_A 535 LPVSNVTKLFTNCIYEASNGIIW 557 (795)
T ss_dssp SCSCGGGGSCEEEEEECTTSCEE
T ss_pred CCCCCCCCCeeEEEEECCCCCEE
Confidence 1123456677776666644
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.17 E-value=1.1e-07 Score=81.68 Aligned_cols=236 Identities=8% Similarity=-0.032 Sum_probs=145.6
Q ss_pred CCeEEEEECCCCceE-----EEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEE
Q psy14511 217 DTSVYTWNTKTNKTQ-----LLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMC 291 (488)
Q Consensus 217 d~~v~iw~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 291 (488)
.+.|+.+++...... ..+.. ....+..++++++++.|+.+....+.|..++...................++
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~---~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia 85 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHI---PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIA 85 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEE---EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEE
T ss_pred CCeEEEEEecCcccccccceeeecC---CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEE
Confidence 457888888765421 12221 2235789999998888887756788999999876544333332224566777
Q ss_pred ec--CCEEE-EeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c---CeEEEEECCCCCCCccc--
Q psy14511 292 WN--GNLLS-CGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N---NTVKIWDFRQLDAKRPL-- 362 (488)
Q Consensus 292 ~~--~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d---~~i~iwd~~~~~~~~~~-- 362 (488)
++ +..++ +-...+.|.++++.... ..............++++|++..|..+. . +.|..+++..... ..+
T Consensus 86 ~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~ 163 (267)
T 1npe_A 86 LDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQ 163 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEEC
T ss_pred EEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEE
Confidence 73 44444 44556889999987532 2222222224578999999766555444 2 5788888764321 111
Q ss_pred ---cee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe-CCCcEEEEecCCC
Q psy14511 363 ---GLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS-ADETISIWNCFPR 437 (488)
Q Consensus 363 ---~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~~~~ 437 (488)
... -.++++++..|+.+ ....+.|..+|+........+.. ......++.. +..|..+. ..+.|..+|..++
T Consensus 164 ~~~~~P~gia~d~~~~~lyv~-d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 164 DNLGLPNGLTFDAFSSQLCWV-DAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp TTCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCCcEEEEcCCCCEEEEE-ECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCC
Confidence 111 11889988877765 45678999999976544333332 2334566653 44554444 5689999999988
Q ss_pred Ccccccccc--CCcceEEeecCCCce
Q psy14511 438 DKKRKARQV--GSGSSLEFAILKQPV 461 (488)
Q Consensus 438 ~~~~~~~~~--~~v~~~~~s~~~~~~ 461 (488)
+........ .....+++.|++++.
T Consensus 240 ~~~~~i~~g~~~~p~gi~~~~~~~~~ 265 (267)
T 1npe_A 240 KEMDTFHPHKQTRLYGITIALSQCPQ 265 (267)
T ss_dssp EEEEEECCSSCCCCCCEEEECSCC--
T ss_pred CceEEEccccccccceeeecCccCCC
Confidence 766443322 247889999987753
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.16 E-value=5.1e-08 Score=87.09 Aligned_cols=128 Identities=13% Similarity=0.146 Sum_probs=79.0
Q ss_pred CCCeEEEEECCCCceEEEEecCCCCCCceEEEEE--cCCCCeEEEEeC-----CCCcEEEEECCccee--eeee--ccc-
Q psy14511 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW--KPRTTDLAVTNT-----CTEYIDLWHEQEERL--IQKL--RTH- 283 (488)
Q Consensus 216 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~-----~~~~i~i~d~~~~~~--~~~~--~~~- 283 (488)
.+.+|.+||+.+++....+.... .......+.| +|+++++++++. .+++|.+|..+.++. .+.+ ...
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~-~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~ 304 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGE-ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEP 304 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCT-TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEE
T ss_pred cCCEEEEEECCCCcEeeEEecCC-CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcc
Confidence 47899999999988777776632 2234455655 999999999855 677887766543321 1111 100
Q ss_pred ---------------cccEEEEEe--cCCEEEEeec-CCeEEEEECcCCCc--cceeeecCC--------------ccEE
Q psy14511 284 ---------------MHQVIAMCW--NGNLLSCGTI-GGNILHYDVRTHSD--YPTAITREG--------------DVVC 329 (488)
Q Consensus 284 ---------------~~~v~~~~~--~~~~l~~~~~-dg~i~i~d~~~~~~--~~~~~~~~~--------------~~i~ 329 (488)
......+.+ |+++|+++.. .+.|.+||+..... ....+.-.. ....
T Consensus 305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr 384 (462)
T 2ece_A 305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQ 384 (462)
T ss_dssp CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCC
Confidence 122344445 8888877765 58999999864322 122221110 1245
Q ss_pred EEEEccCCcEEEEEe
Q psy14511 330 GLKWSPNGRYLASGS 344 (488)
Q Consensus 330 ~~~~s~~~~~l~~~~ 344 (488)
.++++|||++|+++.
T Consensus 385 ~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 385 MLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSSEEEEEC
T ss_pred EEEEcCCCCEEEEEc
Confidence 678888888877775
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.15 E-value=6.9e-11 Score=106.55 Aligned_cols=216 Identities=11% Similarity=0.057 Sum_probs=119.7
Q ss_pred CCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc
Q psy14511 207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ 286 (488)
Q Consensus 207 ~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 286 (488)
.++.+++++.|+.|+.||..+++..-.+.. ..+.+..+.+++..++++ +.|+.|+.||..+++.+..+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~-s~dg~l~a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPD-PNDGSLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEEC-TTTCCEEEC-----CCSEECSCCHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEe-CCCCEEEEEECCCCceeeeeeccCcc
Confidence 456788889999999999999998766654 233344445667677776 89999999999888776665433211
Q ss_pred -E-EEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCCCCccc
Q psy14511 287 -V-IAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL 362 (488)
Q Consensus 287 -v-~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~ 362 (488)
+ .+... ++..+++++.++.++.||..+++. ...+..+. ...++|++..+++++ ++.++.||.++++..-..
T Consensus 82 ~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~-~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 82 LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEK-QQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp HHTTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ccccCceEecCCEEEEEeCCCEEEEEECCCCcE-EEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 1 11112 456778888999999999998753 33333332 234567888888887 699999999988654433
Q ss_pred cee---eeeecCCC---CEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEE-EEEEcCCCCEE----EEEeCCCcEEE
Q psy14511 363 GLI---VPKLKREG---RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERIL-SAVLSPDQTCV----AAASADETISI 431 (488)
Q Consensus 363 ~~~---~~~~~~~~---~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l----~t~~~dg~v~i 431 (488)
... ...+..+. ..+++ ++.++.++.||..+++.+.+... ..++. ...+++++... +.+ ++.++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~v~~--~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ 231 (369)
T 2hz6_A 157 TYFDYAASLPEDDVDYKMSHFV--SNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLRKVMHINVA--VETLRY 231 (369)
T ss_dssp EEEEECCBCCCCCTTCCCCEEE--EETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCEEECCEEEE--HHHHHH
T ss_pred ecccccCccccCCccccceEEE--ECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceEeccceeec--ccceee
Confidence 221 11333332 44555 56799999999999998887763 34443 34556666432 112 334555
Q ss_pred EecCCCC
Q psy14511 432 WNCFPRD 438 (488)
Q Consensus 432 w~~~~~~ 438 (488)
+|..+++
T Consensus 232 ld~~tG~ 238 (369)
T 2hz6_A 232 LTFMSGE 238 (369)
T ss_dssp HHHHHHH
T ss_pred eehhcCC
Confidence 5555444
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.11 E-value=3.5e-09 Score=94.29 Aligned_cols=201 Identities=10% Similarity=-0.023 Sum_probs=118.8
Q ss_pred CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccE
Q psy14511 208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQV 287 (488)
Q Consensus 208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v 287 (488)
.+.+++++.++.|..+|.. ++....... ....+.++...+++. +.++ +.++.|..+|.. ++....+......+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~---~~~~~~~~~~~~~g~-l~vg-t~~~~l~~~d~~-g~~~~~~~~~~~~~ 179 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT---KKAIYATPIVSEDGT-IYVG-SNDNYLYAINPD-GTEKWRFKTNDAIT 179 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC---SSCCCSCCEECTTSC-EEEE-CTTSEEEEECTT-SCEEEEEECSSCCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC---CCceeeeeEEcCCCE-EEEE-cCCCEEEEECCC-CCEeEEEecCCCce
Confidence 4678888889999999988 665554443 333455667777775 5556 678999999988 77666665545555
Q ss_pred EEEEec-CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccceee
Q psy14511 288 IAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIV 366 (488)
Q Consensus 288 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~ 366 (488)
.++..+ +..+..++ +.+..+| .++. ...........+.++...++|.+.+...++.+..+|.
T Consensus 180 ~~~~~d~~g~l~v~t--~~l~~~d-~~g~-~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~------------- 242 (330)
T 3hxj_A 180 SAASIGKDGTIYFGS--DKVYAIN-PDGT-EKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP------------- 242 (330)
T ss_dssp SCCEECTTCCEEEES--SSEEEEC-TTSC-EEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-------------
T ss_pred eeeEEcCCCEEEEEe--CEEEEEC-CCCc-EEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-------------
Confidence 666662 34455555 7788888 4433 2333333334466677777776555444455555542
Q ss_pred eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccccc-cc
Q psy14511 367 PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKA-RQ 445 (488)
Q Consensus 367 ~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~-~~ 445 (488)
+++.+..+......+..+...+++ .|..++.+|.|..+|. +++..... ..
T Consensus 243 ---------------------------~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~ 293 (330)
T 3hxj_A 243 ---------------------------DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETG 293 (330)
T ss_dssp ---------------------------TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECS
T ss_pred ---------------------------CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcC
Confidence 122222222222222334444455 5667778888999985 55544322 22
Q ss_pred cCCcceEEeecCCCce
Q psy14511 446 VGSGSSLEFAILKQPV 461 (488)
Q Consensus 446 ~~~v~~~~~s~~~~~~ 461 (488)
...+.++...+++..+
T Consensus 294 ~~~~~~~~~d~~g~l~ 309 (330)
T 3hxj_A 294 SWIIATPVIDENGTIY 309 (330)
T ss_dssp SCCCSCCEECTTCCEE
T ss_pred CccccceEEcCCCEEE
Confidence 3345566665665543
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.10 E-value=1.7e-11 Score=110.58 Aligned_cols=198 Identities=11% Similarity=0.051 Sum_probs=110.8
Q ss_pred CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecCCeEEEEECcCCCccceeeecCCc-cE
Q psy14511 252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD-VV 328 (488)
Q Consensus 252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~i 328 (488)
++..++++ +.|+.|+.||..+++.+..+.. ..+.+..+ ++..+++++.||.|+.||..+++. ......+.. .+
T Consensus 8 ~~~~v~~g-s~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~-~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVS-TLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG-LTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEE-ETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC-SEECSCCHHHHH
T ss_pred eCCEEEEE-cCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce-eeeeeccCcccc
Confidence 46688888 8999999999999998888765 33322222 567888888999999999987653 222221110 01
Q ss_pred E-EEEEccCCcEEEEEe-cCeEEEEECCCCCCCcccceee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc
Q psy14511 329 C-GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ 405 (488)
Q Consensus 329 ~-~~~~s~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~ 405 (488)
. ...+. ++..+++++ ++.++.||.++++....+.... ..++|++..+++ ++.++.|+.||.++++.+..+..+.
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~--~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYL--GRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC----------------------EEE--EEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEE--EecCCEEEEEECCCCCEEEeEeccc
Confidence 0 01111 334566666 6999999999887654443322 256678888887 6778999999999999877665332
Q ss_pred ccEEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCccccccccCCcce-EEeecCC
Q psy14511 406 ERILSAVLSPDQ---TCVAAASADETISIWNCFPRDKKRKARQVGSGSS-LEFAILK 458 (488)
Q Consensus 406 ~~v~~~~~s~~~---~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v~~-~~~s~~~ 458 (488)
....+++++. ..+++++.||.|+.||..+++.+.......++.. ..+++++
T Consensus 161 --~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 161 --YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREG 215 (369)
T ss_dssp --ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSS
T ss_pred --ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCc
Confidence 2233344432 5677888999999999999987754444444432 3344444
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.09 E-value=1.6e-07 Score=91.52 Aligned_cols=239 Identities=12% Similarity=0.053 Sum_probs=136.8
Q ss_pred CCeEEEEECCCCceEEEEecCCCCC----------------------------CceEEEEEcCCCCeEEEEeCCCC----
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYDN----------------------------AYISCVAWKPRTTDLAVTNTCTE---- 264 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~~----------------------------~~i~~~~~~~~~~~l~~~~~~~~---- 264 (488)
++.|+.+|..+++.+-.+....... .....+++.|+...++++ +.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~-~~~g~~w~ 255 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVG-TGNGSPWN 255 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEe-CCCCCccc
Confidence 5889999999999876665321000 011246888888888888 6665
Q ss_pred ---------------cEEEEECCcceeeeeecc--cc-------ccE--EEEEecCC---EEEEeecCCeEEEEECcCCC
Q psy14511 265 ---------------YIDLWHEQEERLIQKLRT--HM-------HQV--IAMCWNGN---LLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 265 ---------------~i~i~d~~~~~~~~~~~~--~~-------~~v--~~~~~~~~---~l~~~~~dg~i~i~d~~~~~ 315 (488)
.|..+|.++++.+..++. |. .+. ..+.++++ .++.++.+|.++++|..+++
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 399999999998877754 21 222 23445665 68899999999999999875
Q ss_pred ccceeeecCC------------ccE------------------------EEEEEccCCcEEEEEecCeEEEEECCCCCCC
Q psy14511 316 DYPTAITREG------------DVV------------------------CGLKWSPNGRYLASGSNNTVKIWDFRQLDAK 359 (488)
Q Consensus 316 ~~~~~~~~~~------------~~i------------------------~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~ 359 (488)
.. ....... .++ ..++++|+...+..........+........
T Consensus 336 ~l-~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 414 (668)
T 1kv9_A 336 LI-SAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV 414 (668)
T ss_dssp EE-EEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred Ee-ccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence 32 1111100 000 0145666655555443211111111100000
Q ss_pred cccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511 360 RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK 439 (488)
Q Consensus 360 ~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~ 439 (488)
.. ..........+...+- ....++.|..||+.+++.+.+...+ .+.....+...+.++++++.||.++.||..+++.
T Consensus 415 ~~-~~~~~g~~~~~~~~~p-~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 415 TR-KAFNTAAGFADATDVP-AAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CC-SSCCCSSCGGGCCCCC-GGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cc-cccccCccccccCCCC-CCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 00 0000000000000000 1234688999999999988777643 3334444556788999999999999999999998
Q ss_pred cccccccCCc--ceEEeecCCCc
Q psy14511 440 KRKARQVGSG--SSLEFAILKQP 460 (488)
Q Consensus 440 ~~~~~~~~~v--~~~~~s~~~~~ 460 (488)
+........+ .-+.+..+|+.
T Consensus 492 l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 492 LWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp EEEEECSSCCCSCCEEEEETTEE
T ss_pred heEecCCCCcccCceEEEECCEE
Confidence 7443333322 23444455654
No 243
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.07 E-value=7.4e-06 Score=81.88 Aligned_cols=381 Identities=12% Similarity=0.016 Sum_probs=212.3
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeec-------ccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-------REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNN 76 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~-------~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~ 76 (488)
+|++.+ |+.++-+..||..+++.. .... -....|.++...++|++.+...+ -+.+||..+.+........
T Consensus 173 ~g~lwi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~ 249 (781)
T 3v9f_A 173 DGKLYI-GHVEGGLSILSLNDKSVK-HFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNP 249 (781)
T ss_dssp TTEEEE-EETTTEEEEEETTTTEEE-EECC--------CCSSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----
T ss_pred CCCEEE-EecCCCeEEEcCCCCceE-eeecCCCCcccCCCCceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCC
Confidence 344443 555545888887765421 1110 11346999999999987765545 6889997653321111000
Q ss_pred ----cccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511 77 ----QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE 152 (488)
Q Consensus 77 ----~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (488)
.-....|.++...++|...+.+ . .+-|.+++..++............ +. ..
T Consensus 250 ~~~~~l~~~~i~~i~~d~~g~lWigt-~---~~Gl~~~~~~~~~~~~~~~~~f~~-----~~-~~--------------- 304 (781)
T 3v9f_A 250 GNIHGALSSYIFSIKQLKDNKLWIAT-E---LNGIMILDLQQNQFLLPEQIRFEF-----IR-EG--------------- 304 (781)
T ss_dssp ------CCCCEEEEEECTTSEEEEEE-S---SSCEEEEETTCC---------CEE-----EC-BC---------------
T ss_pred CccccccCceEEEEEECCCCCEEEEe-C---CCCeEEECCCCCeeeeeecccccc-----cc-CC---------------
Confidence 0123569999988888544433 2 367888887665432111000000 00 00
Q ss_pred ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceE
Q psy14511 153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQ 231 (488)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~ 231 (488)
..........+.++.. ..+.+.+++.++-|..++..+....
T Consensus 305 --------------------------------------~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~ 346 (781)
T 3v9f_A 305 --------------------------------------DNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFH 346 (781)
T ss_dssp --------------------------------------SSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCE
T ss_pred --------------------------------------CCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcce
Confidence 0000000111222222 2467888888888999998876654
Q ss_pred EEEec------CCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee---ccccccEEEEEec-CCEEEEee
Q psy14511 232 LLVEY------PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL---RTHMHQVIAMCWN-GNLLSCGT 301 (488)
Q Consensus 232 ~~~~~------~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~-~~~l~~~~ 301 (488)
..... .......|.++...++++.. ++ +.++.|..|+..++...... ......|.++..+ ...|..|+
T Consensus 347 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-ig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt 424 (781)
T 3v9f_A 347 TWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IG-TDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGT 424 (781)
T ss_dssp EEC----CCCSSCCSSSCEEEEEECTTSCEE-EE-EBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEE
T ss_pred eeccCccccccCCCCCcceEEEEEcCCCCEE-EE-eCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEe
Confidence 43211 11134569999998887644 45 55667889998765432211 1234678888884 45666788
Q ss_pred cCCeEEEEECcCCCccceeee---cCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCccc--------ceeee--e
Q psy14511 302 IGGNILHYDVRTHSDYPTAIT---REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPL--------GLIVP--K 368 (488)
Q Consensus 302 ~dg~i~i~d~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~--------~~~~~--~ 368 (488)
.++-+..+|..+++ ...+. .....|.++...++|++.+... +.+..||..+.+..... ...+. .
T Consensus 425 ~~~Gl~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 501 (781)
T 3v9f_A 425 YLGNISYYNTRLKK--FQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIA 501 (781)
T ss_dssp TTEEEEEECSSSCE--EEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEE
T ss_pred ccCCEEEEcCCCCc--EEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEE
Confidence 77779999887642 12221 2345689999988887666544 67889998765432111 11122 4
Q ss_pred ecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee----ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccccc
Q psy14511 369 LKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI----HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR 444 (488)
Q Consensus 369 ~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~ 444 (488)
..++|+..+. ..++.+..+|..+++.. .+.. ....|.++...++|.+.++.. +|.|..||..+++......
T Consensus 502 ~d~~g~lWig---t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~ 576 (781)
T 3v9f_A 502 QDSEGRFWIG---TFGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQR 576 (781)
T ss_dssp ECTTCCEEEE---ESSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEECG
T ss_pred EcCCCCEEEE---EcCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEccc
Confidence 5566776665 33344888888765433 2321 235689999988888666554 6755888887665432211
Q ss_pred ----ccCCcceEEeecCCCc
Q psy14511 445 ----QVGSGSSLEFAILKQP 460 (488)
Q Consensus 445 ----~~~~v~~~~~s~~~~~ 460 (488)
....+.++...++|..
T Consensus 577 ~~gl~~~~i~~i~~d~~g~l 596 (781)
T 3v9f_A 577 KEGLPNTHIRAISEDKNGNI 596 (781)
T ss_dssp GGTCSCCCCCEEEECSSSCE
T ss_pred cCCCCCceEEEEEECCCCCE
Confidence 1224556665555543
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.07 E-value=2.5e-08 Score=92.32 Aligned_cols=252 Identities=12% Similarity=0.057 Sum_probs=165.5
Q ss_pred EEEEECCCeEEEEECCCCceEEEEecCC------------------------------------CCCCceEEEEEcC---
Q psy14511 211 TLAVALDTSVYTWNTKTNKTQLLVEYPT------------------------------------YDNAYISCVAWKP--- 251 (488)
Q Consensus 211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~------------------------------------~~~~~i~~~~~~~--- 251 (488)
+.+++..|.++++-+.+++....+..-. ...+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 5667789999999999888766543210 0112223355555
Q ss_pred --CCCeEEEEeCCCCcEEEEECCcceeeeeeccc-cccEEEEEe----cCCEEEEee------------------cCCeE
Q psy14511 252 --RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-MHQVIAMCW----NGNLLSCGT------------------IGGNI 306 (488)
Q Consensus 252 --~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~----~~~~l~~~~------------------~dg~i 306 (488)
||+++++....+..|.+.|+.+.++...+.-. ......+++ +++++++++ .++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 88999998667788999999999887744321 233555553 688888874 34578
Q ss_pred EEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec-C--------------------------------------e
Q psy14511 307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-N--------------------------------------T 347 (488)
Q Consensus 307 ~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-~--------------------------------------~ 347 (488)
.+.|..+.+ ....+.-.. ....++++|+|+++++++. . .
T Consensus 178 tvID~~t~~-v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 178 TAVDADKWE-VAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEETTTTE-EEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEECCCCe-EEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 999998754 333332211 2356889999999988872 1 3
Q ss_pred EEEEECCC--CCC-Cccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcc------------eeEEEeeccccE
Q psy14511 348 VKIWDFRQ--LDA-KRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLH------------LIEELKIHQERI 408 (488)
Q Consensus 348 i~iwd~~~--~~~-~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~------------~~~~~~~~~~~v 408 (488)
+.+.|.++ ... ...+... ...++|||++++++ +..+.+|.++|+.+.+ .+.++. -....
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~-~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP 333 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVA-GKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGP 333 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEE-CTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEe-CCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCc
Confidence 67777776 221 1112111 12999999999987 6778999999998653 233333 22457
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEecCC----------CCccccc------cccCCcceEEeecCCCceEEEEe
Q psy14511 409 LSAVLSPDQTCVAAASADETISIWNCFP----------RDKKRKA------RQVGSGSSLEFAILKQPVSLTAL 466 (488)
Q Consensus 409 ~~~~~s~~~~~l~t~~~dg~v~iw~~~~----------~~~~~~~------~~~~~v~~~~~s~~~~~~~~~~~ 466 (488)
..++|+|||...++.-.|+.|.+||++. .+.+... +|........++|||+.+.....
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 8999999995555677899999999987 2222221 22222345567899998866543
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.04 E-value=3.9e-07 Score=86.85 Aligned_cols=246 Identities=13% Similarity=0.013 Sum_probs=141.9
Q ss_pred CcEEEEEC------CCeEEEEECCCCceEEEEecCCCCC-----------------------------------C-ceEE
Q psy14511 209 HDTLAVAL------DTSVYTWNTKTNKTQLLVEYPTYDN-----------------------------------A-YISC 246 (488)
Q Consensus 209 ~~~~~~~~------d~~v~iw~~~~~~~~~~~~~~~~~~-----------------------------------~-~i~~ 246 (488)
+.+++++. ++.|+.+|..+++.+-.+.... .. . ....
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~-~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~ 239 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATG-SDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGW 239 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSS-CHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCC-CccccccCcccccccccccccccccccCcccceecCCCCeeee
Confidence 45555554 7899999999998876655432 10 0 0023
Q ss_pred EEEcCCCCeEEEEeCCC----------------CcEEEEECCcceeeeeeccc----------cccEE-EEEecCC---E
Q psy14511 247 VAWKPRTTDLAVTNTCT----------------EYIDLWHEQEERLIQKLRTH----------MHQVI-AMCWNGN---L 296 (488)
Q Consensus 247 ~~~~~~~~~l~~~~~~~----------------~~i~i~d~~~~~~~~~~~~~----------~~~v~-~~~~~~~---~ 296 (488)
+++.++...++++ ..+ +.|..+|.++++.+..++.. ..++. ....+|+ .
T Consensus 240 ~a~d~~~g~vy~~-~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~ 318 (571)
T 2ad6_A 240 YAYDPKLNLFYYG-SGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPL 318 (571)
T ss_dssp CEEETTTTEEEEE-CCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEE
T ss_pred EEEcCCCCeEEEE-CCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEE
Confidence 5677777777777 432 35999999999888776532 12222 2223563 6
Q ss_pred EEEeecCCeEEEEECcCCCccceeeecC------------CccE--------------------------EEEEEccCCc
Q psy14511 297 LSCGTIGGNILHYDVRTHSDYPTAITRE------------GDVV--------------------------CGLKWSPNGR 338 (488)
Q Consensus 297 l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~i--------------------------~~~~~s~~~~ 338 (488)
++.++.+|.++++|..+++......... ..++ ..++++|+..
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 7788999999999998875322211111 0111 2357888877
Q ss_pred EEEEEec-CeEEEEECCCCCCCcccce-e--eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEc
Q psy14511 339 YLASGSN-NTVKIWDFRQLDAKRPLGL-I--VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLS 414 (488)
Q Consensus 339 ~l~~~~d-~~i~iwd~~~~~~~~~~~~-~--~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s 414 (488)
++++... ....++............. . ....+|.+. . ...++.|..||+.+++.+.++... ..+....+.
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~---~--~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~ 472 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGP---T--KKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLY 472 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTST---T--SCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEE
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCcccc---C--CCCCCeEEEEECCCCCEEEEecCC-CCccceeEE
Confidence 7777763 3333443322100000000 0 000111110 0 024688999999999988777533 233333333
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCccccccccCCc--ceEEeecCCCceE
Q psy14511 415 PDQTCVAAASADETISIWNCFPRDKKRKARQVGSG--SSLEFAILKQPVS 462 (488)
Q Consensus 415 ~~~~~l~t~~~dg~v~iw~~~~~~~~~~~~~~~~v--~~~~~s~~~~~~~ 462 (488)
..+..++.++.||.|+.+|..+++.+........+ .-+.+..+++.+.
T Consensus 473 t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 473 TKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 45677888999999999999999988544333332 2344556666543
No 246
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=1.4e-05 Score=79.97 Aligned_cols=376 Identities=9% Similarity=-0.046 Sum_probs=208.9
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeec---c---cCceEEEEEEcc--CCcEEEEecCCeEEEEeccccCcCCCccc
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAIT---R---EGDVVCGLKWSP--NGRYLASGSNNTVKIWDFRQLDAKRPQVN 75 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~---~---h~~~V~~l~~sp--~g~~las~~d~~i~vwd~~~~~~~~~~~~ 75 (488)
+|+.|-.|+.++-+..||..+.+-...... . ....|.++...+ +|++.+...++.|..+|..+.+.. .+..
T Consensus 76 ~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~-~~~~ 154 (781)
T 3v9f_A 76 VQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFT-HYNK 154 (781)
T ss_dssp SSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETTTTEEE-EEST
T ss_pred CCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECCCCeEE-eecc
Confidence 354244566664689999876552211001 1 123689998888 787666443666888887653211 1100
Q ss_pred --cc-ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeee
Q psy14511 76 --NQ-CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFE 152 (488)
Q Consensus 76 --~~-~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (488)
.. -....|.++...+++... +... ++-+..+|..+++..........+ .
T Consensus 155 ~~~~~l~~~~i~~i~~d~~g~lw-igt~---~~Gl~~~~~~~~~~~~~~~~~~~~-~----------------------- 206 (781)
T 3v9f_A 155 STVPALPSEQTWTATEAEDGKLY-IGHV---EGGLSILSLNDKSVKHFVHDPQNP-N----------------------- 206 (781)
T ss_dssp TTCTTCSCCCEEEEEEEETTEEE-EEET---TTEEEEEETTTTEEEEECC------------------------------
T ss_pred CcccCCCccceEEEEECCCCCEE-EEec---CCCeEEEcCCCCceEeeecCCCCc-c-----------------------
Confidence 00 123468888888777544 4433 546888987766532211000000 0
Q ss_pred ccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeee-CCCcEEEEECCCeEEEEECCCCceE
Q psy14511 153 IDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDW-GYHDTLAVALDTSVYTWNTKTNKTQ 231 (488)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iw~~~~~~~~ 231 (488)
......+..+.. ..+.+.+++.+ -+.+||..+++..
T Consensus 207 ------------------------------------------~l~~~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~ 243 (781)
T 3v9f_A 207 ------------------------------------------SLPGNDVRCIYKDTNGNIWIGTSK-GLALFNANTETFT 243 (781)
T ss_dssp --------------------------------------------CCSSEEEEEECTTCCEEEEETT-EEEEEETTTTEEE
T ss_pred ------------------------------------------cCCCCceeEEEEcCCCCEEEEeCC-cHheECCCCCcEE
Confidence 000001112222 24568888766 7999998877654
Q ss_pred EEEecC----CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--------------cccccEEEEEec
Q psy14511 232 LLVEYP----TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--------------THMHQVIAMCWN 293 (488)
Q Consensus 232 ~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--------------~~~~~v~~~~~~ 293 (488)
...... ......|.++...++|... ++ +..+.|.++|..+.+...... .....|.++..|
T Consensus 244 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-ig-t~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D 321 (781)
T 3v9f_A 244 NFHNNPGNIHGALSSYIFSIKQLKDNKLW-IA-TELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQD 321 (781)
T ss_dssp C-----------CCCCEEEEEECTTSEEE-EE-ESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEEC
T ss_pred EEEcCCCccccccCceEEEEEECCCCCEE-EE-eCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEe
Confidence 332211 1135679999998888544 45 454668889987654322111 134578888884
Q ss_pred -CCEEEEeecCCeEEEEECcCCCccceeee----------cCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcc-
Q psy14511 294 -GNLLSCGTIGGNILHYDVRTHSDYPTAIT----------REGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP- 361 (488)
Q Consensus 294 -~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~- 361 (488)
...|..|+.++-|..++..... ...+. .....|.++...++|.+.+...++.+..||..+......
T Consensus 322 ~~g~lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 399 (781)
T 3v9f_A 322 SFNNIWIGTWGGGINFISNAPPT--FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK 399 (781)
T ss_dssp SSCCEEEEEBSSCEEEECSSCCS--CEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-
T ss_pred CCCCEEEEecCCeEEEeCCCCCc--ceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc
Confidence 4467778877778999877542 11111 123568999998888766554457788888765422111
Q ss_pred ----c-ceeee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe---eccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511 362 ----L-GLIVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK---IHQERILSAVLSPDQTCVAAASADETISI 431 (488)
Q Consensus 362 ----~-~~~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~t~~~dg~v~i 431 (488)
+ ...+. ...++|...+. ..++.+..+|..+++.. .+. .....|.++...+++++.+. +. +-|..
T Consensus 400 ~~~~~~~~~v~~i~~d~~g~lWig---t~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~ 473 (781)
T 3v9f_A 400 ENRELLSNSVLCSLKDSEGNLWFG---TYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFV 473 (781)
T ss_dssp ----CCCSBEEEEEECTTSCEEEE---ETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEE
T ss_pred CCCCCCCcceEEEEECCCCCEEEE---eccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEE
Confidence 0 01122 33445555543 45567899998776543 222 13457999998888876554 44 45888
Q ss_pred EecCCCCccccccc------cCCcceEEeecCCCce
Q psy14511 432 WNCFPRDKKRKARQ------VGSGSSLEFAILKQPV 461 (488)
Q Consensus 432 w~~~~~~~~~~~~~------~~~v~~~~~s~~~~~~ 461 (488)
++..+++....... ...+.++...+++...
T Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 509 (781)
T 3v9f_A 474 IDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW 509 (781)
T ss_dssp EESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE
T ss_pred EeCCCCeEEecccCcccccccceeEEEEEcCCCCEE
Confidence 99887654422111 2456677666665544
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.00 E-value=3.8e-07 Score=76.42 Aligned_cols=194 Identities=11% Similarity=0.022 Sum_probs=128.0
Q ss_pred eeeeeeCC-CcEEEEEC---CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee
Q psy14511 201 TSGLDWGY-HDTLAVAL---DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL 276 (488)
Q Consensus 201 ~~~~~~~~-~~~~~~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~ 276 (488)
...+.+++ +.++.++. ++.|.++|+.+++....+.+.. ......+++. ++.++.+.-.++.+.++|..+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD--SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT--TCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC--CcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 34566666 66776653 5899999999999888877643 2223345554 556766657899999999999988
Q ss_pred eeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeee-c-CC---ccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511 277 IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT-R-EG---DVVCGLKWSPNGRYLASGSNNTVKIW 351 (488)
Q Consensus 277 ~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~-~~---~~i~~~~~s~~~~~l~~~~d~~i~iw 351 (488)
+.++......-..+++|++.++++..++.|.++|..+.+. ...+. + .. ..++.+.|. +|+..+..
T Consensus 99 ~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v-~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~-------- 168 (266)
T 2iwa_A 99 IKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKL-IKKHNVKYNGHRVIRLNELEYI-NGEVWANI-------- 168 (266)
T ss_dssp EEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEE-TTEEEEEE--------
T ss_pred EEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcE-EEEEEECCCCcccccceeEEEE-CCEEEEec--------
Confidence 8888533123356888887777777789999999987643 22222 1 11 124566666 55433322
Q ss_pred ECCCCCCCcccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec-------------cccEEEEEEcCCCC
Q psy14511 352 DFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH-------------QERILSAVLSPDQT 418 (488)
Q Consensus 352 d~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~ 418 (488)
..++.|.+.|.++++.+..+.-. ....+.++|+|+++
T Consensus 169 ------------------------------~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~ 218 (266)
T 2iwa_A 169 ------------------------------WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK 218 (266)
T ss_dssp ------------------------------TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT
T ss_pred ------------------------------CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC
Confidence 22445555566666666655421 13568999999986
Q ss_pred E-EEEEeCCCcEEEEecCCCC
Q psy14511 419 C-VAAASADETISIWNCFPRD 438 (488)
Q Consensus 419 ~-l~t~~~dg~v~iw~~~~~~ 438 (488)
. ++|+...+.|+..++.+..
T Consensus 219 ~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 219 RIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEEETTCSEEEEEEEEECC
T ss_pred EEEEECCCCCeEEEEEEeccc
Confidence 5 5556678899999987654
No 248
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.98 E-value=4.5e-06 Score=79.48 Aligned_cols=238 Identities=12% Similarity=0.025 Sum_probs=137.2
Q ss_pred CCeEEEEECCCCceEEEEecCCCCCC------------c-----------------------e-EEEEEcCCCCeEEEEe
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYDNA------------Y-----------------------I-SCVAWKPRTTDLAVTN 260 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~~~------------~-----------------------i-~~~~~~~~~~~l~~~~ 260 (488)
++.|+-+|.++++.+-.+.... ... + + ..+++.++...++++
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~-~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g- 258 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATG-PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFG- 258 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSS-CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEE-
T ss_pred CCeEEEEECCCCcEEEEEcCCC-CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEe-
Confidence 7899999999998776655432 110 0 0 135666777788887
Q ss_pred CCC----------------CcEEEEECCcceeeeeecccc----------ccEE-EEE-ecC---CEEEEeecCCeEEEE
Q psy14511 261 TCT----------------EYIDLWHEQEERLIQKLRTHM----------HQVI-AMC-WNG---NLLSCGTIGGNILHY 309 (488)
Q Consensus 261 ~~~----------------~~i~i~d~~~~~~~~~~~~~~----------~~v~-~~~-~~~---~~l~~~~~dg~i~i~ 309 (488)
..+ +.|..+|.++++....++... .++. .+. .+| ..++.++.+|.++++
T Consensus 259 ~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~l 338 (599)
T 1w6s_A 259 TGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTL 338 (599)
T ss_dssp CCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred CCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEE
Confidence 544 479999999998887765421 1222 222 356 567778999999999
Q ss_pred ECcCCCccceeeec------------CCccE--------------------------EEEEEccCCcEEEEEecCeEEEE
Q psy14511 310 DVRTHSDYPTAITR------------EGDVV--------------------------CGLKWSPNGRYLASGSNNTVKIW 351 (488)
Q Consensus 310 d~~~~~~~~~~~~~------------~~~~i--------------------------~~~~~s~~~~~l~~~~d~~i~iw 351 (488)
|.++++.....-.. ...++ ..++++|+..++++........+
T Consensus 339 D~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~ 418 (599)
T 1w6s_A 339 DRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDW 418 (599)
T ss_dssp ETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred ECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceee
Confidence 99887532221110 01111 24678888888877663222122
Q ss_pred ECCCCCCCcccceeeeeecCCCCE-EEEEccC------CCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511 352 DFRQLDAKRPLGLIVPKLKREGRE-LVTSHGK------QDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS 424 (488)
Q Consensus 352 d~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~ 424 (488)
.+.......- ...+ ...+ +.....+ ..|.|.-||+.+++.+.+.... .+...-.....+.+++.++
T Consensus 419 ~~~~~~~~~g-~~~~-----g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt 491 (599)
T 1w6s_A 419 EPFMLPYKAG-QFFV-----GATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGT 491 (599)
T ss_dssp EECCCCCCTT-SCCC-----CEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEEC
T ss_pred ecccccccCC-ccee-----cccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEEC
Confidence 2211100000 0000 0000 1110001 4588999999999988776522 2222212233567888899
Q ss_pred CCCcEEEEecCCCCccccccccCC--cceEEeecCCCceEE
Q psy14511 425 ADETISIWNCFPRDKKRKARQVGS--GSSLEFAILKQPVSL 463 (488)
Q Consensus 425 ~dg~v~iw~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~~~ 463 (488)
.||.++.||..+++.+........ ..-+.|..+|+.+..
T Consensus 492 ~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 492 LDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA 532 (599)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEE
Confidence 999999999999998844332222 233556677775543
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.96 E-value=6.9e-07 Score=74.90 Aligned_cols=194 Identities=14% Similarity=0.122 Sum_probs=131.6
Q ss_pred eeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccc
Q psy14511 83 VKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS 162 (488)
Q Consensus 83 v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (488)
...+.|++|+ .|+.+.+...++.|.+.|+.+++.+..+......
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~----------------------------------- 66 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY----------------------------------- 66 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-----------------------------------
T ss_pred cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-----------------------------------
Confidence 5789999986 5555543112579999999999987766532110
Q ss_pred cccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCC
Q psy14511 163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDN 241 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~ 241 (488)
....+.+.++.++.+. .++.+.++|..+.+....+.... .
T Consensus 67 -------------------------------------fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~--~ 107 (266)
T 2iwa_A 67 -------------------------------------FGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQM--K 107 (266)
T ss_dssp -------------------------------------CEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCS--S
T ss_pred -------------------------------------ceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCC--C
Confidence 0011233345666666 78999999999999888776530 1
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc--c---cEEEEEe-cCCEEEEeecCCeEEEEECcCCC
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM--H---QVIAMCW-NGNLLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~--~---~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~ 315 (488)
. ...++++++.++++ ..++.|.++|..+.+.+..+.-.. . ....+.+ ++...+....++.|.+.|..+++
T Consensus 108 ~---g~glt~Dg~~l~vs-~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 108 D---GWGLATDGKILYGS-DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp S---CCEEEECSSSEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCC
T ss_pred C---eEEEEECCCEEEEE-CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCc
Confidence 1 13355688888888 678899999999988777765321 1 3566777 56555555567899999999875
Q ss_pred ccceeeecC-------------CccEEEEEEccCCcEEEEEe-c-CeEEEEECCCC
Q psy14511 316 DYPTAITRE-------------GDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQL 356 (488)
Q Consensus 316 ~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~ 356 (488)
....+.-. ....+.++|+|+++.+.+++ . +.+...++...
T Consensus 184 -V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 184 -LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp -EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred -EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 33333211 13568999999987766666 4 88888887654
No 250
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.94 E-value=4.4e-05 Score=73.33 Aligned_cols=369 Identities=7% Similarity=-0.035 Sum_probs=195.3
Q ss_pred cCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEec
Q psy14511 13 IGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP 90 (488)
Q Consensus 13 ~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~ 90 (488)
....|+..|+.........+.........++|++.+..|..+. .+.|..++++.......+ ...-......|++.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v--~~~~~~~P~GlAvD~ 93 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--VVSGLLSPDGLACDW 93 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE--ECSSCSCEEEEEEET
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE--EeCCCCCcCeEEEEe
Confidence 3668999998765311222333444578999999777776665 789999998753211111 121224678999999
Q ss_pred CCCeEEeeeCCcccceEEEEecCCCeeeeeeec-CCCccccccccccccccceeEEEEEeeeeccccceeccccccccce
Q psy14511 91 WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKT-DSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT 169 (488)
Q Consensus 91 ~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (488)
.+..|+.+... .+.|.+.++.... ...+.. .......++
T Consensus 94 ~~~~ly~~d~~--~~~I~v~~~dG~~-~~~l~~~~l~~P~~Ia------------------------------------- 133 (619)
T 3s94_A 94 LGEKLYWTDSE--TNRIEVSNLDGSL-RKVLFWQELDQPRAIA------------------------------------- 133 (619)
T ss_dssp TTTEEEEEETT--TTEEEEEETTSCS-CEEEECSSCSCCCCEE-------------------------------------
T ss_pred cCCEEEEEeCC--CCEEEEEECCCCC-EEEEEeCCCCCCceEE-------------------------------------
Confidence 77788887764 7899999986433 222211 100000000
Q ss_pred eeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEE
Q psy14511 170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCV 247 (488)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~ 247 (488)
++...+.++.+. ..+.|...+++.......... .-.....+
T Consensus 134 ----------------------------------vdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~---~~~~P~Gl 176 (619)
T 3s94_A 134 ----------------------------------LDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS---EIYWPNGL 176 (619)
T ss_dssp ----------------------------------EETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSSEEEE
T ss_pred ----------------------------------EecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC---CCCCCcEE
Confidence 111123344333 235666666654433333321 33467899
Q ss_pred EEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCEEE-EeecCCeEEEEECcCCCccceee-----
Q psy14511 248 AWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLS-CGTIGGNILHYDVRTHSDYPTAI----- 321 (488)
Q Consensus 248 ~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~----- 321 (488)
+++++++.|+.+-...+.|..+|+..........+.......+++++..++ +-..++.|...|..+++......
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~ 256 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFS 256 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCC
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCC
Confidence 999988888888567788999988764333222211222245666444444 44456678777775543110000
Q ss_pred -----ecCC--------------ccEEEEE-----------Ecc-------CC--------cEEEEEecCeEEEEECCCC
Q psy14511 322 -----TREG--------------DVVCGLK-----------WSP-------NG--------RYLASGSNNTVKIWDFRQL 356 (488)
Q Consensus 322 -----~~~~--------------~~i~~~~-----------~s~-------~~--------~~l~~~~d~~i~iwd~~~~ 356 (488)
..|. +....++ ..| |+ .+|+.+..+.|+..++...
T Consensus 257 p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~ 336 (619)
T 3s94_A 257 PMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTP 336 (619)
T ss_dssp CSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSST
T ss_pred CcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCC
Confidence 0000 0000011 111 21 2455555677888888755
Q ss_pred CCCc---c---cceee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCC-EEEEEeCCCc
Q psy14511 357 DAKR---P---LGLIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQT-CVAAASADET 428 (488)
Q Consensus 357 ~~~~---~---~~~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~t~~~dg~ 428 (488)
+... + +.... -+|.+.+..++.+ ....+.|+.+++........+...-.....+++.+.++ +..+-+..+.
T Consensus 337 ~~~~~~~~~~~l~~~~~ld~d~~~~~ly~s-D~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~ 415 (619)
T 3s94_A 337 DFTDIVLQLEDIRHAIAIDYDPVEGYIYWT-DDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDR 415 (619)
T ss_dssp TCCCEECCCSCCSSEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred ccceeEEeccccCccEEEEEEcCCCeEEEE-eCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCc
Confidence 4221 1 11111 2677765655554 45577888888865443333333334577899987555 4455556788
Q ss_pred EEEEecCCCCccccc-cccCCcceEEeecCCCce
Q psy14511 429 ISIWNCFPRDKKRKA-RQVGSGSSLEFAILKQPV 461 (488)
Q Consensus 429 v~iw~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~ 461 (488)
|.+.++......... ..-.....+++.|....+
T Consensus 416 I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~l 449 (619)
T 3s94_A 416 IEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYM 449 (619)
T ss_dssp EEEEETTSCSCEEEECTTCCSEEEEEEETTTTEE
T ss_pred EEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcE
Confidence 999998865443332 233456788888863333
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.89 E-value=1.1e-06 Score=72.75 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=98.5
Q ss_pred ccceeeeeeeCCCcEEEEE-CCC--eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511 197 NDFYTSGLDWGYHDTLAVA-LDT--SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273 (488)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~-~d~--~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~ 273 (488)
...+...+.++++.++.++ .+| .|+.+|+++++......++. ...-..+++ +++.|....-.++.+.+||..+
T Consensus 41 ~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 41 TKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK--RYFGEGISD--WKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp TTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT--TCCEEEEEE--ETTEEEEEESSSSEEEEEETTT
T ss_pred CCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC--ccceeEEEE--eCCEEEEEEeeCCEEEEEECcc
Confidence 3345566777766666665 444 89999999999988887642 212233444 4556666646799999999999
Q ss_pred ceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeec--CC---ccEEEEEEccCCcEEEEEe-cCe
Q psy14511 274 ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR--EG---DVVCGLKWSPNGRYLASGS-NNT 347 (488)
Q Consensus 274 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~i~~~~~s~~~~~l~~~~-d~~ 347 (488)
.+.+.++.... .-..++++++.|+....++.|.++|..+.+. ...+.- .. ..++.+.|. +|+..+..- ++.
T Consensus 117 ~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v-~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~ 193 (262)
T 3nol_A 117 LRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTP-VRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK 193 (262)
T ss_dssp CCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSE-EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred CcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeE-EEEEEeccCCccccccceeEEE-CCEEEEEEccCCe
Confidence 99998886533 3357778888777777788899999987642 222221 11 224456665 565443332 255
Q ss_pred EEEEECCCC
Q psy14511 348 VKIWDFRQL 356 (488)
Q Consensus 348 i~iwd~~~~ 356 (488)
|.+.|.+++
T Consensus 194 I~vIDp~tG 202 (262)
T 3nol_A 194 IVRIDPETG 202 (262)
T ss_dssp EEEECTTTC
T ss_pred EEEEECCCC
Confidence 555555543
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.89 E-value=1.4e-06 Score=72.08 Aligned_cols=130 Identities=12% Similarity=0.212 Sum_probs=91.1
Q ss_pred CCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--c
Q psy14511 208 YHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH--M 284 (488)
Q Consensus 208 ~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~--~ 284 (488)
++.++... .++.+.+||..+.+....+...+ .. ..+.++++.|+.+ ..++.|.++|..+.+.+..+.-. .
T Consensus 96 g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG-----~glt~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EG-----WGLTHNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CC-----CCEEECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETT
T ss_pred CCEEEEEEeeCCEEEEEECccCcEEEEEECCC-Cc-----eEEecCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCC
Confidence 45666666 68999999999999988888753 21 2333577888888 56788999999998887776542 1
Q ss_pred ---ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeec------------CCccEEEEEEccCCcEEEEEec
Q psy14511 285 ---HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITR------------EGDVVCGLKWSPNGRYLASGSN 345 (488)
Q Consensus 285 ---~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~~i~~~~~s~~~~~l~~~~d 345 (488)
..+..+.+ +|+..+..-.++.|.+.|..+++ ....+.. .....+.+||+|+++.|.+.+.
T Consensus 169 ~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 169 EELPELNELEWVDGEIFANVWQTNKIVRIDPETGK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EECCCEEEEEEETTEEEEEETTSSEEEEECTTTCB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccccccceeEEECCEEEEEEccCCeEEEEECCCCc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 23455677 66655555568899999998875 2222221 1245689999998877777664
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=3.2e-06 Score=69.31 Aligned_cols=155 Identities=16% Similarity=0.046 Sum_probs=100.5
Q ss_pred ccccceeeeeeeCCCcEEEEECC---CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC
Q psy14511 195 IINDFYTSGLDWGYHDTLAVALD---TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE 271 (488)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~d---~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~ 271 (488)
.....+...+.++++.++.++.. ..|+.+|+.+++......++. ...-..+++. ++.|....-.++.+.+||.
T Consensus 17 hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 17 HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAW--RDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEE--TTEEEEEESSSSEEEEEET
T ss_pred CCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC--CcceeEEEEe--CCEEEEEEeeCCEEEEEEC
Confidence 34445566777888877777643 589999999999988887653 1122334443 4556655478999999999
Q ss_pred CcceeeeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeec--CC---ccEEEEEEccCCcEEEEEe-c
Q psy14511 272 QEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITR--EG---DVVCGLKWSPNGRYLASGS-N 345 (488)
Q Consensus 272 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~i~~~~~s~~~~~l~~~~-d 345 (488)
.+.+.+.++.... .-..++.+++.|+....++.|.++|..+.+ ....+.- +. ..++.+.+. +|+..+..- +
T Consensus 93 ~tl~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s 169 (243)
T 3mbr_X 93 ATLTPRARFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLT 169 (243)
T ss_dssp TTTEEEEEEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTT
T ss_pred CcCcEEEEEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCe-EEEEEEEccCCcccccceeeEEe-CCEEEEEECCC
Confidence 9999998887533 336778888777777778999999998764 2222221 11 224455554 555443332 2
Q ss_pred CeEEEEECCCC
Q psy14511 346 NTVKIWDFRQL 356 (488)
Q Consensus 346 ~~i~iwd~~~~ 356 (488)
..|.+.|.+++
T Consensus 170 ~~I~vIDp~tG 180 (243)
T 3mbr_X 170 SRIARIDPASG 180 (243)
T ss_dssp TEEEEECTTTC
T ss_pred CeEEEEECCCC
Confidence 55555555443
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.84 E-value=2.2e-05 Score=74.89 Aligned_cols=252 Identities=11% Similarity=0.034 Sum_probs=149.6
Q ss_pred CCcEEEEECCCeEEEEECCCCceEEEEecCCCCC--CceE---EEEEc-CCCC-eEEEEeC------CCCcEEEEECCcc
Q psy14511 208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--AYIS---CVAWK-PRTT-DLAVTNT------CTEYIDLWHEQEE 274 (488)
Q Consensus 208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~i~---~~~~~-~~~~-~l~~~~~------~~~~i~i~d~~~~ 274 (488)
++.+++++.++.|.-+|..+++..-...... +. ..+. .+.=. .+++ .++++ . .++.|..+|..++
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~-~~~~~~~~~sP~v~~~~~~G~~~v~vg-~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFAD-HGAGYTMTGAPTIVKDGKTGKVLLIHG-SSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSC-GGGTCBCCSCCEEEECTTTCCEEEEEC-CBCGGGCCBCEEEEECTTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCC-CCcCcccccCCEEeCCCcCCcEEEEEe-ccccccCCCCEEEEEECCCC
Confidence 4678888899999999999999876665432 10 0111 11111 1233 45554 3 3789999999998
Q ss_pred eeeeeeccccccE-----------------------------------------EEEEe--cCCEEEEeec---------
Q psy14511 275 RLIQKLRTHMHQV-----------------------------------------IAMCW--NGNLLSCGTI--------- 302 (488)
Q Consensus 275 ~~~~~~~~~~~~v-----------------------------------------~~~~~--~~~~l~~~~~--------- 302 (488)
+.+.........+ ..+++ +..+++.+..
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 8776543211000 01223 3456665552
Q ss_pred -----------C----CeEEEEECcCCCccceeee-cCC--------ccEEEEEEc-cCCc---EEEEEe-cCeEEEEEC
Q psy14511 303 -----------G----GNILHYDVRTHSDYPTAIT-REG--------DVVCGLKWS-PNGR---YLASGS-NNTVKIWDF 353 (488)
Q Consensus 303 -----------d----g~i~i~d~~~~~~~~~~~~-~~~--------~~i~~~~~s-~~~~---~l~~~~-d~~i~iwd~ 353 (488)
| +.|..+|..+++..-.... .|. .++. +... .+|+ .++.++ +|.++++|.
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 5899999998764333222 221 2222 2222 4674 666776 599999998
Q ss_pred CCCCCCccccee--------------------------------------------------eeeecCCCCEEEEEcc--
Q psy14511 354 RQLDAKRPLGLI--------------------------------------------------VPKLKREGRELVTSHG-- 381 (488)
Q Consensus 354 ~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~l~~~~g-- 381 (488)
++++..-..... ..+++|+...+++...
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 877543111000 0145565555544210
Q ss_pred -----------------------------CCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511 382 -----------------------------KQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIW 432 (488)
Q Consensus 382 -----------------------------~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw 432 (488)
..+|.|.-||+.+++.+.+..... ++..-.....+.+++.++.||.++.|
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~ 512 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAF 512 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEE
Confidence 136889999999999887765432 22222222356788889999999999
Q ss_pred ecCCCCccccccccCCcc--eEEeecCCCceEE
Q psy14511 433 NCFPRDKKRKARQVGSGS--SLEFAILKQPVSL 463 (488)
Q Consensus 433 ~~~~~~~~~~~~~~~~v~--~~~~s~~~~~~~~ 463 (488)
|..+++.+........+. -+.|..+|+.+..
T Consensus 513 D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 513 DAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ECCCCCEEEEecCCCCcccCceEEEECCEEEEE
Confidence 999999885544444443 3667777776544
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.84 E-value=3.4e-05 Score=68.60 Aligned_cols=225 Identities=8% Similarity=-0.009 Sum_probs=141.7
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI 288 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~ 288 (488)
..++..+....|+..++.......... ....+..++|++....|+.+-...+.|..+++........+........
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~~~~----~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~ 119 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG 119 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred CceeEeecccceEEEeCCCCeeEEeec----CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc
Confidence 445666667778888888766554443 3345789999988888887746778899999876543333322222233
Q ss_pred EEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCccc
Q psy14511 289 AMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKRPL 362 (488)
Q Consensus 289 ~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~ 362 (488)
.+++ ++++.++-...+.|.+.++.... ........-.....++++|.+..|..+. . +.|..+++.........
T Consensus 120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 198 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 198 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC
T ss_pred EEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 4444 34555666667889999987532 2222333335578999999776666555 3 77888888743222211
Q ss_pred ce-e----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511 363 GL-I----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 363 ~~-~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
.. . -.+++|++..|+.+ ....+.|..+|+........+.........+++ ..+..+++-...+.|...+..++
T Consensus 199 ~~~~~~PnGla~d~~~~~lY~a-D~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 199 DTHLFWPNGLTIDYAGRRMYWV-DAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp CSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCCcceEEEeCCCCEEEEE-ECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence 11 1 12889888777775 456788999998643333333333445677888 34555566666788888886666
Q ss_pred Ccc
Q psy14511 438 DKK 440 (488)
Q Consensus 438 ~~~ 440 (488)
+..
T Consensus 277 ~~~ 279 (349)
T 3v64_C 277 KNQ 279 (349)
T ss_dssp CSC
T ss_pred Ccc
Confidence 554
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=1.2e-06 Score=85.28 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=51.9
Q ss_pred CCcEEEEECCcceeeeeeccccccE-EEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCcc-EEEEEEccCCc-E
Q psy14511 263 TEYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV-VCGLKWSPNGR-Y 339 (488)
Q Consensus 263 ~~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-i~~~~~s~~~~-~ 339 (488)
+|.|..||+.+++.+.....+.... ..+...+.+++.++.|+.++.||.++++. +..+...... -.-+.+..+|+ +
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~-l~~~~~~~~~~~~p~~~~~~G~~y 515 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA-LWQFEAQSGIVAAPMTFELAGRQY 515 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh-heEecCCCCcccCceEEEECCEEE
Confidence 3789999999999887765433222 24445788999999999999999998753 3333322211 11234455776 4
Q ss_pred EEEEe
Q psy14511 340 LASGS 344 (488)
Q Consensus 340 l~~~~ 344 (488)
++.+.
T Consensus 516 va~~~ 520 (668)
T 1kv9_A 516 VAIMA 520 (668)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44443
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.82 E-value=2.3e-06 Score=70.73 Aligned_cols=130 Identities=11% Similarity=0.126 Sum_probs=91.1
Q ss_pred CCCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc--
Q psy14511 207 GYHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH-- 283 (488)
Q Consensus 207 ~~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~-- 283 (488)
.++.++... .++.+.+||..+.+.+..+...+ .. ..++ ++++.|+++ ..++.|.++|..+.+.+..+.-.
T Consensus 104 ~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-eG---wGLt--~Dg~~L~vS-dGs~~l~~iDp~T~~v~~~I~V~~~ 176 (268)
T 3nok_A 104 DGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-EG---WGLC--YWNGKLVRS-DGGTMLTFHEPDGFALVGAVQVKLR 176 (268)
T ss_dssp CSSCEEEEESSSCEEEEEETTTTEEEEEEECSS-CC---CCEE--EETTEEEEE-CSSSEEEEECTTTCCEEEEEECEET
T ss_pred eCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-ce---eEEe--cCCCEEEEE-CCCCEEEEEcCCCCeEEEEEEeCCC
Confidence 345666666 78999999999999998888753 21 2333 578888888 67899999999998887776532
Q ss_pred c---ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeee-------------cCCccEEEEEEccCCcEEEEEe
Q psy14511 284 M---HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-------------REGDVVCGLKWSPNGRYLASGS 344 (488)
Q Consensus 284 ~---~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~ 344 (488)
. ..+..+.| +|+..+....+..|.+.|..+++. ...+. ...+..+.+|++|+++.|...+
T Consensus 177 g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V-~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 177 GQPVELINELECANGVIYANIWHSSDVLEIDPATGTV-VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBE-EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcE-EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 2 23466777 676555555688999999988752 22221 1224578999999876555554
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.82 E-value=4.2e-06 Score=68.62 Aligned_cols=130 Identities=14% Similarity=0.220 Sum_probs=91.2
Q ss_pred CCcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccc--
Q psy14511 208 YHDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHM-- 284 (488)
Q Consensus 208 ~~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~-- 284 (488)
+++++... .++.+.+||..+.+.+..+...+ . + ..++ +++..|+++ ..++.|.++|..+.+.+.++.-..
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~-G--wglt--~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-E-G--WALT--SDDSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSS-C-C--CEEE--ECSSCEEEE-CSSSEEEEECTTTCCEEEEEECEETT
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-C-c--eEEe--eCCCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCC
Confidence 45566665 78999999999999998888753 2 1 2333 577888888 668899999999988877765422
Q ss_pred ---ccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeee-------------cCCccEEEEEEccCCcEEEEEec
Q psy14511 285 ---HQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAIT-------------REGDVVCGLKWSPNGRYLASGSN 345 (488)
Q Consensus 285 ---~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~d 345 (488)
..++.+.+ +|+..+..-.+..|.+.|..+++. ...+. ...+..+.++++|+++.|...+.
T Consensus 147 ~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V-~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 147 RPLDNLNELEWVNGELLANVWLTSRIARIDPASGKV-VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBE-EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cccccceeeEEeCCEEEEEECCCCeEEEEECCCCCE-EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 34566777 566555555678999999988752 22221 12245789999998776666663
No 259
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=1.6e-05 Score=71.94 Aligned_cols=225 Identities=8% Similarity=0.011 Sum_probs=143.0
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEE
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVI 288 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~ 288 (488)
..++..+....|+.+++.......... ....+..++|++.+..|+.+-...+.|..+++........+........
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~ 162 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG 162 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC
T ss_pred cceeEeecCccceeeccCCCcEEEEec----CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc
Confidence 446666677889999988776655544 3345789999988777777746778899999877543333322222223
Q ss_pred --EEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCccc
Q psy14511 289 --AMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKRPL 362 (488)
Q Consensus 289 --~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~ 362 (488)
++.+ .+++.++-...+.|.+.++.... ....+...-.....++++|.+..|..+. . +.|..+++.........
T Consensus 163 glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp CEEEETTTTEEEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 4444 34555565667888888886532 2223333335578999999777666655 3 67888888643222111
Q ss_pred ce-e----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511 363 GL-I----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 363 ~~-~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
.. . -.+++|++..|+.+ ....+.|..+|+........+.........+++ ..+..+++-...+.|..++..++
T Consensus 242 ~~~~~~PnGlavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 242 DTHLFWPNGLTIDYAGRRMYWV-DAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp CSSCSCEEEEEEEGGGTEEEEE-ETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCCeeeEEEeCCCCEEEEE-ECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 11 1 12888877777765 456788999998644333333333445678888 44556666667788998886666
Q ss_pred Ccc
Q psy14511 438 DKK 440 (488)
Q Consensus 438 ~~~ 440 (488)
+..
T Consensus 320 ~~~ 322 (386)
T 3v65_B 320 KNQ 322 (386)
T ss_dssp CSC
T ss_pred cce
Confidence 554
No 260
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.79 E-value=0.00014 Score=69.91 Aligned_cols=422 Identities=10% Similarity=-0.017 Sum_probs=206.7
Q ss_pred cc-CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec---CCeEEEEeccccCcCCCccccc
Q psy14511 2 CW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPQVNNQ 77 (488)
Q Consensus 2 ~~-dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~~~~~~~~~~ 77 (488)
.| +++++.+-...+.|.+.+..... ..............|++.|.+.+|.... .+.|...+++. .....+. .
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~--~ 167 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIII--N 167 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEE--C
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEE--e
Confidence 46 45556666677899999987543 2233334444567899999755555443 46777777663 2222221 1
Q ss_pred ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccc-------ccceeEEEEEee
Q psy14511 78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ-------KKRRHLSFLLHG 150 (488)
Q Consensus 78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 150 (488)
..-.....|++.++++.|+.+-.. .+.|...+++.................+. .... ....+..+....
T Consensus 168 ~~~~~P~Glald~~~~~LY~aD~~--~~~I~~~~~dG~~~~~~~~~~~~~P~gi~--~~~~~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 168 SEIYWPNGLTLDYEEQKLYWADAK--LNFIHKSNLDGTNRQAVVKGSLPHPFALT--LFEDILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp SSCSSEEEEEEETTTTEEEEEETT--TCCEEEESSSCCEEC---------CCCEE--ESSSEEEEECTTTCSEEEEESSS
T ss_pred CCCCCCcEEEEEccCCEEEEEeCC--CCeEEEecCCCCccEEEEeCCCCCceEEE--EeCCEEEEecCCCCEEEEEECCC
Confidence 123457899999988888887764 78899999865443322221111111111 1111 000111111100
Q ss_pred eeccccceecccc-ccccceeeecccc---ccccccc-CC-CceeecCCCccccceeee------------eeeCCCcEE
Q psy14511 151 FEIDRKKVLNQSK-RTVSPTQFLRTLG---KLPRKVK-AK-PERILEAPSIINDFYTSG------------LDWGYHDTL 212 (488)
Q Consensus 151 ~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~-~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 212 (488)
.. ....+.... .+.....+....+ ..+.... .. ....+..+.. ..+.+.+ +...+..++
T Consensus 244 g~--~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~-~~~~C~C~~g~~l~~d~~~C~~~~~~~L 320 (619)
T 3s94_A 244 GE--GLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVK-PFYQCACPTGVKLLENGKTCKDGATELL 320 (619)
T ss_dssp CC--CCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSST-TSEEEECCTTCCBCTTSSCBCSSCSEEE
T ss_pred Cc--ccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCC-CCceEeCCchheecccCcccCCCCceEE
Confidence 00 000000000 0000000000000 0000000 00 0000000000 0000000 111134566
Q ss_pred EEECCCeEEEEECCCCceEE-EEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEE
Q psy14511 213 AVALDTSVYTWNTKTNKTQL-LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMC 291 (488)
Q Consensus 213 ~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 291 (488)
..+..+.|+..++....... .+... .-..+.+++|.+.+..|+.+-...+.|+.+++........+...-.....++
T Consensus 321 l~~~~~~i~~i~l~~~~~~~~~~~~~--~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlA 398 (619)
T 3s94_A 321 LLARRTDLRRISLDTPDFTDIVLQLE--DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIA 398 (619)
T ss_dssp EEEESSCEEEEESSSTTCCCEECCCS--CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEcccceEEEecCCCccceeEEecc--ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceE
Confidence 66777788888887665322 22222 3345789999997778877745678899998876433333322222334445
Q ss_pred e---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCcccc--
Q psy14511 292 W---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKRPLG-- 363 (488)
Q Consensus 292 ~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~~~~-- 363 (488)
+ .+++.++-+..+.|.+.++.... ........-.....+++.|....|..+. . ..|...++..........
T Consensus 399 vD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~ 477 (619)
T 3s94_A 399 VDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTS 477 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCC
Confidence 4 34555665667899999987542 2222223345578999999754555443 2 677777776432211111
Q ss_pred --eee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511 364 --LIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDK 439 (488)
Q Consensus 364 --~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~ 439 (488)
... -++++++..|+.+ -...+.|..+++........+...-....+++...+ ....+-...+.|...+..++..
T Consensus 478 l~~P~GlalD~~~~~LY~a-D~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 478 LGWPNGLALDYDEGKIYWG-DAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSAER 554 (619)
T ss_dssp CSCEEEEEEETTTTEEEEE-ETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT-EEEEECTTSSCEEEEESSSCCE
T ss_pred CCCCeeeEEcccCCEEEEE-ECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCCce
Confidence 111 1778777777765 455678888887543322222222223345555433 3333333456777777777643
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.77 E-value=1.3e-06 Score=72.21 Aligned_cols=174 Identities=11% Similarity=0.032 Sum_probs=119.4
Q ss_pred EEEEEec-CCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--cCeEEEEECCCCCCCcccc
Q psy14511 287 VIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPLG 363 (488)
Q Consensus 287 v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~~~~~~ 363 (488)
...+.++ +.+..+.+.+|.|+++|+.+++..... ......-..+++ ++..|.... ++.+.+||..+.+....+.
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 3677775 455666777889999999997644333 222211223444 455555555 5999999999986655554
Q ss_pred eeee--eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc-----ccEEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy14511 364 LIVP--KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ-----ERILSAVLSPDQTCVAAASADETISIWNCFP 436 (488)
Q Consensus 364 ~~~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~ 436 (488)
.... .+.++++.|+.+. .++.|.++|.++.+.+.++.-.. ..++.+.|. +|+..|..-.+..|.+-|..+
T Consensus 134 ~~~eGwGLt~Dg~~L~vSd--Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 134 YSGEGWGLCYWNGKLVRSD--GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp CSSCCCCEEEETTEEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTT
T ss_pred CCCceeEEecCCCEEEEEC--CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 3222 6668899888853 48899999999999888775422 245778887 787666666788999999999
Q ss_pred CCccccccc--------------cCCcceEEeecCCCceEEEEe
Q psy14511 437 RDKKRKARQ--------------VGSGSSLEFAILKQPVSLTAL 466 (488)
Q Consensus 437 ~~~~~~~~~--------------~~~v~~~~~s~~~~~~~~~~~ 466 (488)
++....... ..-...++|.|+++.+-..+.
T Consensus 211 G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 211 GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 987632111 123478999998888766553
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.73 E-value=2.7e-06 Score=81.07 Aligned_cols=134 Identities=10% Similarity=0.092 Sum_probs=83.0
Q ss_pred EEEEECCCeEEEEECCCCceEEEEecCCC----------CCCce--------------------------EEEEEcCCCC
Q psy14511 211 TLAVALDTSVYTWNTKTNKTQLLVEYPTY----------DNAYI--------------------------SCVAWKPRTT 254 (488)
Q Consensus 211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~----------~~~~i--------------------------~~~~~~~~~~ 254 (488)
++.+..+|.++++|..+++.+-...+... ...++ ..++++|+..
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 44566788999999999987766554210 00111 2467888877
Q ss_pred eEEEEeC------------------------------------CCCcEEEEECCcceeeeeeccccccE-EEEEecCCEE
Q psy14511 255 DLAVTNT------------------------------------CTEYIDLWHEQEERLIQKLRTHMHQV-IAMCWNGNLL 297 (488)
Q Consensus 255 ~l~~~~~------------------------------------~~~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l 297 (488)
.+++... .++.|..||..+++.+.++....... ..+...+..+
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v 478 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLV 478 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEE
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEE
Confidence 7777521 35789999999988877765322111 1233357788
Q ss_pred EEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe
Q psy14511 298 SCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS 344 (488)
Q Consensus 298 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 344 (488)
+.++.||.++.+|.++++..-.........-.-+.+..+|+.++...
T Consensus 479 ~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 479 WYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 88999999999999987643333222211112234557887665544
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.73 E-value=1.4e-05 Score=76.14 Aligned_cols=176 Identities=10% Similarity=0.015 Sum_probs=107.6
Q ss_pred EEEEcCCCCeEEEEeCC-------------------C----CcEEEEECCcceeeeeecc--cc--------ccEEE-EE
Q psy14511 246 CVAWKPRTTDLAVTNTC-------------------T----EYIDLWHEQEERLIQKLRT--HM--------HQVIA-MC 291 (488)
Q Consensus 246 ~~~~~~~~~~l~~~~~~-------------------~----~~i~i~d~~~~~~~~~~~~--~~--------~~v~~-~~ 291 (488)
.+++.|+...++++.+. | +.|..+|..+++.+..++. |. .++.. ..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~ 329 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK 329 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeee
Confidence 35677777788877321 2 5899999999998877653 21 22222 11
Q ss_pred -ecC---CEEEEeecCCeEEEEECcCCCccceeeecC------------CccE---------------------------
Q psy14511 292 -WNG---NLLSCGTIGGNILHYDVRTHSDYPTAITRE------------GDVV--------------------------- 328 (488)
Q Consensus 292 -~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~i--------------------------- 328 (488)
.+| ..++.++.+|.++++|.++++......... ..++
T Consensus 330 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 409 (582)
T 1flg_A 330 AKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFL 409 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTT
T ss_pred cCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCc
Confidence 246 378889999999999998865321111110 0000
Q ss_pred -----EEEEEccCCcEEEEEe----------------------------------cCeEEEEECCCCCCCcccceeee--
Q psy14511 329 -----CGLKWSPNGRYLASGS----------------------------------NNTVKIWDFRQLDAKRPLGLIVP-- 367 (488)
Q Consensus 329 -----~~~~~s~~~~~l~~~~----------------------------------d~~i~iwd~~~~~~~~~~~~~~~-- 367 (488)
..++++|+..++++.. ++.|.-||+.+++..-.......
T Consensus 410 Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~ 489 (582)
T 1flg_A 410 GGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLW 489 (582)
T ss_dssp CSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCC
T ss_pred cccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCc
Confidence 1346666655444321 37788899988864422222111
Q ss_pred --eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccE-EEEEEcCCCCE-EEEE
Q psy14511 368 --KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERI-LSAVLSPDQTC-VAAA 423 (488)
Q Consensus 368 --~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~s~~~~~-l~t~ 423 (488)
.....+..+++ |+.|+.++.||.++|+.+.+++...... .-+.|..+|+. +++.
T Consensus 490 ~g~~~tagglvf~--g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 490 AGVLATAGNLVFT--GTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp SCCEEETTTEEEE--ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred ccceEeCCCEEEE--ECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 33344666777 7889999999999999998887543321 23566678874 4443
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.72 E-value=1.4e-05 Score=79.07 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=43.4
Q ss_pred ccCc-eEEEEEEc-cCCcEEEEec--C----CeEEEEecccc-CcCCCcccccccccceeEEEEecCCCeEEeeeC
Q psy14511 34 REGD-VVCGLKWS-PNGRYLASGS--N----NTVKIWDFRQL-DAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGG 100 (488)
Q Consensus 34 ~h~~-~V~~l~~s-p~g~~las~~--d----~~i~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~ 100 (488)
+|.- .+...+|| |||++||.+. + ..|+++|+.++ +.... .+ ......+.|+|||+.|+.+..
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~---~~~~~~~~WspDg~~l~y~~~ 240 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KV---SGTNGEIVWGPDHTSLFYVTK 240 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CE---EEECSCCEECSSTTEEEEEEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cc---cCceeeEEEecCCCEEEEEEE
Confidence 3443 68899999 9999999764 2 35999999986 42111 11 122457899999998888764
No 265
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.70 E-value=0.0001 Score=64.58 Aligned_cols=222 Identities=9% Similarity=-0.015 Sum_probs=137.0
Q ss_pred EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc----ceeeeeecccccc
Q psy14511 211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE----ERLIQKLRTHMHQ 286 (488)
Q Consensus 211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~----~~~~~~~~~~~~~ 286 (488)
++..+....|+..++.+.+...+.. ....+..++|++.++.|+.+....+.|..+++.. ......+......
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~----~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred EEEEECCCeEEEEECCCcceEehhc----CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 4555666789999999877655543 3456789999998877877746678999999876 2222222222122
Q ss_pred EEEEEe--cC-CEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCc
Q psy14511 287 VIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKR 360 (488)
Q Consensus 287 v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~ 360 (488)
...+++ .+ ++.++-...+.|.++++.... ..............++++|.+..|..+. . +.|...++.......
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~ 157 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 157 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE
Confidence 344554 34 455555677899999987532 2222333334578999999766555544 3 688888876432111
Q ss_pred c----ccee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee---ccccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy14511 361 P----LGLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI---HQERILSAVLSPDQTCVAAASADETISIW 432 (488)
Q Consensus 361 ~----~~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~t~~~dg~v~iw 432 (488)
. +... -.++++++..|+.+ ....+.|..+|+... ....+.. .-.....+++. .+..+++-...+.|..+
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~-D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 234 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEECCCCCceEEEEeccCCEEEEE-ECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEE
Confidence 1 1111 11888888877775 456789999998743 3333321 12346778874 45556666677889999
Q ss_pred ecCCCCcc
Q psy14511 433 NCFPRDKK 440 (488)
Q Consensus 433 ~~~~~~~~ 440 (488)
+..+++..
T Consensus 235 ~~~~g~~~ 242 (316)
T 1ijq_A 235 NRLTGSDV 242 (316)
T ss_dssp ETTTCCCC
T ss_pred eCCCCcce
Confidence 98776654
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.66 E-value=6.9e-05 Score=65.43 Aligned_cols=217 Identities=15% Similarity=0.081 Sum_probs=131.5
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEeecC--CeEEEEECcCCCcc
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIG--GNILHYDVRTHSDY 317 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d--g~i~i~d~~~~~~~ 317 (488)
.....++|+++++.+++- ..++.|..||.... ....+. .......+++ +++++++.... ..|..+|..+++ .
T Consensus 32 ~~pegia~~~~g~lyv~d-~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~-~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTN-HEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-V 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEE-TTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-E
T ss_pred CCcceEEECCCCCEEEEe-CCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-E
Confidence 467889999998855555 67899999997753 333332 2345777888 56765554332 246677766543 2
Q ss_pred ceeee-cCCccEEEEEEccCCcEEEEEe-cCeEEEEECCCCC--CC---------cccce--eeeeecCCCCEEEEEccC
Q psy14511 318 PTAIT-REGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLD--AK---------RPLGL--IVPKLKREGRELVTSHGK 382 (488)
Q Consensus 318 ~~~~~-~~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~~~--~~---------~~~~~--~~~~~~~~~~~l~~~~g~ 382 (488)
..... ........++..+++..+++.. ++.|.++|..... .. ..... ....++++++.++++ ..
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~-d~ 186 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS-NT 186 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE-ET
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEE-eC
Confidence 11111 1222345556666665555544 4899999976431 10 00011 122348888877775 56
Q ss_pred CCCeEEEEeCCC-cce--eEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc--ccc-ccCCcceEEee-
Q psy14511 383 QDCSLKMWEYPR-LHL--IEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR--KAR-QVGSGSSLEFA- 455 (488)
Q Consensus 383 ~~~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~--~~~-~~~~v~~~~~s- 455 (488)
..+.|..+++.. ++. ...+. .......+++.++|+++++....+.|.+++.. ++... ... ......+++|.
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 678999999864 321 12221 11345678999999887777778899999975 44422 122 23557899998
Q ss_pred --cCCCceEEEE
Q psy14511 456 --ILKQPVSLTA 465 (488)
Q Consensus 456 --~~~~~~~~~~ 465 (488)
|++..+.+..
T Consensus 265 ~~~d~~~LyVt~ 276 (306)
T 2p4o_A 265 TEGDCTAIYVVT 276 (306)
T ss_dssp STTTTTEEEEEE
T ss_pred ccCCCCEEEEEC
Confidence 8877765544
No 267
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.65 E-value=0.00069 Score=69.77 Aligned_cols=221 Identities=11% Similarity=0.079 Sum_probs=126.3
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC--------------------------
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC-------------------------- 262 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-------------------------- 262 (488)
+.++ +..++.+++..++.-+.....+++ -...+..++++|+.+.+++..+.
T Consensus 707 ~g~v-~~~~~~LrI~~i~~~~~~~~~~ip--L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1158)
T 3ei3_A 707 DSLA-LANNSTLTIGTIDEIQKLHIRTVP--LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV 783 (1158)
T ss_dssp TEEE-EECSSCEEEEEECCSSSEEEEEEE--CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred CcEE-EEcCCceEEEEecccCCeeEEEEe--CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence 3344 445566888887654433333333 34577888888887766554211
Q ss_pred ----------------------CCcEEEEECCcceeeeeeccc-cccEEEEEe----c--CCEEEEee----------cC
Q psy14511 263 ----------------------TEYIDLWHEQEERLIQKLRTH-MHQVIAMCW----N--GNLLSCGT----------IG 303 (488)
Q Consensus 263 ----------------------~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~----~--~~~l~~~~----------~d 303 (488)
.+.|++.|..+.+.+..++-. ...+.+++. + ..+++.|+ ..
T Consensus 784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~ 863 (1158)
T 3ei3_A 784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQ 863 (1158)
T ss_dssp CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCC
T ss_pred cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCc
Confidence 123566666655555444321 223344443 2 46888876 35
Q ss_pred CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcc-ccee----eeeecCCCCEEEE
Q psy14511 304 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP-LGLI----VPKLKREGRELVT 378 (488)
Q Consensus 304 g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~-~~~~----~~~~~~~~~~l~~ 378 (488)
|.|++|++...+-.........+++++++-- +| +|+++-..++++|++...+..+. ...+ .......+.++++
T Consensus 864 Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~v 941 (1158)
T 3ei3_A 864 GRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILV 941 (1158)
T ss_dssp EEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEE
T ss_pred eEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEE
Confidence 7899999974322222223345678877643 45 56666678999999986542221 1111 1122334667777
Q ss_pred EccCCCCeEEEE--eCCCcceeEEEe-eccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511 379 SHGKQDCSLKMW--EYPRLHLIEELK-IHQERILSAVLSPDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 379 ~~g~~~~~i~i~--d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
|..-..+.++ +....+....-+ .+...++++.|-.+ ..++.+..+|++.+....+.
T Consensus 942 --gD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 942 --GDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp --EESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECTT
T ss_pred --EEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCC
Confidence 4555555554 444333332222 23456888888655 46778999999999988763
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.64 E-value=1.1e-05 Score=78.86 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=67.7
Q ss_pred CCceEEEeecCC-----------eEEEEEcccCcccce-ee-cccCceEEEEEEccCCcEEEEec--CCeEEEEeccccC
Q psy14511 4 NGNLLSCGTIGG-----------NILHYDVRTHSDYPT-AI-TREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLD 68 (488)
Q Consensus 4 dg~~la~g~~dg-----------~i~iwd~~~~~~~~~-~~-~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~ 68 (488)
+|++++.|+.++ .+.+||..+++-... .+ ..+.....++++.++|++++.|+ +..+.+||..+.+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 788888887543 688999988763211 11 22333344577889999999998 5789999988643
Q ss_pred cCCCcccccccccceeEEEEecCCCeEEeeeCCc---ccceEEEEecCCCee
Q psy14511 69 AKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI---CDQTVRLWNSMNGKE 117 (488)
Q Consensus 69 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~---~d~~i~vwd~~~~~~ 117 (488)
-. .+..+.... .-.+++..++++.++..|... .-..+.+||..+++.
T Consensus 277 W~-~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 277 WI-PGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EE-ECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred ee-ECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 22 221221111 113445567887655555220 015688999877653
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.64 E-value=4.4e-06 Score=82.73 Aligned_cols=109 Identities=12% Similarity=0.038 Sum_probs=68.7
Q ss_pred cCCceEEEeec-C----CeEEEEEcccC-cccceeecccCceEEEEEEccCCcEEEEec-C-----CeEEEEeccccCcC
Q psy14511 3 WNGNLLSCGTI-G----GNILHYDVRTH-SDYPTAITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDFRQLDAK 70 (488)
Q Consensus 3 ~dg~~la~g~~-d----g~i~iwd~~~~-~~~~~~~~~h~~~V~~l~~sp~g~~las~~-d-----~~i~vwd~~~~~~~ 70 (488)
.||++||.+.. + .+|+++|+.++ +.+...+.. ....++|+|||+.|+... | ..|.++++.++...
T Consensus 184 PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~ 260 (751)
T 2xe4_A 184 PEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSE 260 (751)
T ss_dssp TTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGG
T ss_pred CCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchh
Confidence 79999985543 2 35999999988 643322322 234689999999888776 3 36888888764322
Q ss_pred C-CcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCC
Q psy14511 71 R-PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNG 115 (488)
Q Consensus 71 ~-~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~ 115 (488)
. .+.. ..+......+.|+|||++|+..........|.++|+.++
T Consensus 261 ~~lv~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 261 DVCLYE-EHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CEEEEE-CCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred cEEEEe-cCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 1 1211 122234567899999999887764212445666666543
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.63 E-value=1.2e-05 Score=76.56 Aligned_cols=192 Identities=13% Similarity=0.079 Sum_probs=116.8
Q ss_pred CCcEEEEEC-CCeEEEEEC-CCCceEEEEecCCCCC--------CceEEEEEcCCCCe----EEEEeCCCCcEEEEECCc
Q psy14511 208 YHDTLAVAL-DTSVYTWNT-KTNKTQLLVEYPTYDN--------AYISCVAWKPRTTD----LAVTNTCTEYIDLWHEQE 273 (488)
Q Consensus 208 ~~~~~~~~~-d~~v~iw~~-~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~----l~~~~~~~~~i~i~d~~~ 273 (488)
++.+++++. ++.|.-+|. .+++.+-......... .....++++|.+.. ++++ +.++.|..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~-t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT-QLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE-CTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEE-cCCCEEEEEECCC
Confidence 466777777 899999999 8998876665432000 01123556444444 7777 8899999999999
Q ss_pred ceeeeeeccccc----cEE-EEEecCCEEEEee------cCCeEEEEECcCCCccceeeecCCc----------------
Q psy14511 274 ERLIQKLRTHMH----QVI-AMCWNGNLLSCGT------IGGNILHYDVRTHSDYPTAITREGD---------------- 326 (488)
Q Consensus 274 ~~~~~~~~~~~~----~v~-~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~---------------- 326 (488)
++.+........ .+. .....+..+++++ .+|.|+-+|.++++..-........
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence 988776543210 111 1112234555555 3799999999987643222111100
Q ss_pred --------------------cE-EEEEEccCCcEEEEEe-c----------------CeEEEEECCCCCCCccccee---
Q psy14511 327 --------------------VV-CGLKWSPNGRYLASGS-N----------------NTVKIWDFRQLDAKRPLGLI--- 365 (488)
Q Consensus 327 --------------------~i-~~~~~s~~~~~l~~~~-d----------------~~i~iwd~~~~~~~~~~~~~--- 365 (488)
.+ ..+++.++...++.+. + +.|.-+|.++++..-..+..
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 00 1345666666666665 3 27888888887653222211
Q ss_pred -----------eeeec-CCCC---EEEEEccCCCCeEEEEeCCCcceeEEEe
Q psy14511 366 -----------VPKLK-REGR---ELVTSHGKQDCSLKMWEYPRLHLIEELK 402 (488)
Q Consensus 366 -----------~~~~~-~~~~---~l~~~~g~~~~~i~i~d~~~~~~~~~~~ 402 (488)
..... .+|+ .++. +..+|.++++|..+|+++....
T Consensus 301 ~wd~d~~~~p~l~d~~~~~G~~~~~v~~--~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 301 EWDYAGVNVMMLSEQKDKDGKARKLLTH--PDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SSCCCCCCCCEEEEEECTTSCEEEEEEE--ECTTSEEEEEETTTCCEEEEEE
T ss_pred cccccCCCccEEEeccccCCcEEEEEEE--ECCCcEEEEEECCCCCEeeccc
Confidence 01111 4563 4444 6889999999999999887654
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.63 E-value=0.00013 Score=63.70 Aligned_cols=217 Identities=10% Similarity=-0.032 Sum_probs=125.7
Q ss_pred eeeeeeCC-CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC-cEEEEECCcceee
Q psy14511 201 TSGLDWGY-HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE-YIDLWHEQEERLI 277 (488)
Q Consensus 201 ~~~~~~~~-~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-~i~i~d~~~~~~~ 277 (488)
...+.+++ +.++.+. .++.|..||.... ....... ...+..+++.++++.+++....++ .|..++..+++..
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~----~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV----EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC----SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC----CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 34455543 4566666 7889999998764 3333332 346889999999985554412222 4666777666543
Q ss_pred eeecc-ccccEEEEE-ecCCEE-EEeecCCeEEEEECcCCCccce---------eeecCCccEEEEEEccCCcEEEEEe-
Q psy14511 278 QKLRT-HMHQVIAMC-WNGNLL-SCGTIGGNILHYDVRTHSDYPT---------AITREGDVVCGLKWSPNGRYLASGS- 344 (488)
Q Consensus 278 ~~~~~-~~~~v~~~~-~~~~~l-~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~i~~~~~s~~~~~l~~~~- 344 (488)
..... .......++ +.+..+ ++-..++.|+.+|...+..... .....-...+.+ +|+++.|..+.
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 22211 111223333 344444 4444588999999764311110 000111234555 88998777776
Q ss_pred c-CeEEEEECCC-CCC--Cccccee--e--eeecCCCCEEEEEccCCCCeEEEEeCCCcceeE--EEeeccccEEEEEEc
Q psy14511 345 N-NTVKIWDFRQ-LDA--KRPLGLI--V--PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE--ELKIHQERILSAVLS 414 (488)
Q Consensus 345 d-~~i~iwd~~~-~~~--~~~~~~~--~--~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s 414 (488)
. +.|..+++.. +.. ...+... . .++.++|+..++ ....+.|.++|.. ++... .+...-...++++|.
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va--~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGA--THIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEE--CBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEE--eCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe
Confidence 3 8999999875 221 1111111 1 188899987666 4567889999975 65532 222223468999999
Q ss_pred ---CCCCEEEEEeCCC
Q psy14511 415 ---PDQTCVAAASADE 427 (488)
Q Consensus 415 ---~~~~~l~t~~~dg 427 (488)
||++.|..++..+
T Consensus 264 g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 264 QTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CSTTTTTEEEEEECTT
T ss_pred cccCCCCEEEEECCCC
Confidence 8987777666543
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.62 E-value=0.00019 Score=62.74 Aligned_cols=223 Identities=9% Similarity=-0.007 Sum_probs=129.1
Q ss_pred CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW 91 (488)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 91 (488)
...|+..|+.........+........+++|.+.+..|.... .+.|..++.++......+ ....-.....+++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~--~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--VVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE--EEECCSCCCEEEEETT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE--EcCCCCCccEEEEEcC
Confidence 568999999876422222223334577899999665555554 789999998764221111 1112235678889886
Q ss_pred CCeEEeeeCCcccceEEEEecCCCeeeeeee-cCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511 92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVK-TDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ 170 (488)
Q Consensus 92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (488)
+..|+.+... .+.|.+.+++... ...+. ....... .
T Consensus 90 ~g~ly~~d~~--~~~I~~~~~dG~~-~~~l~~~~~~~P~-------------g--------------------------- 126 (318)
T 3sov_A 90 GEKLYWTDSE--TNRIEVSNLDGSL-RKVLFWQELDQPR-------------A--------------------------- 126 (318)
T ss_dssp TTEEEEEETT--TTEEEEEETTSCS-CEEEECSSCSSEE-------------E---------------------------
T ss_pred CCeEEEEECC--CCEEEEEECCCCc-EEEEEeCCCCCcc-------------E---------------------------
Confidence 6677776653 7789999875432 21111 0000000 0
Q ss_pred eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEEE
Q psy14511 171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA 248 (488)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~ 248 (488)
..++...+.++.+. ..+.|...++........... .-...+.++
T Consensus 127 -------------------------------iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~l~~Pngla 172 (318)
T 3sov_A 127 -------------------------------IALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS---EIYWPNGLT 172 (318)
T ss_dssp -------------------------------EEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSCEEEEE
T ss_pred -------------------------------EEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC---CCCCccEEE
Confidence 00111123344443 246777777765433332221 234578999
Q ss_pred EcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEec-CCEEEEeecCCeEEEEECcCCC
Q psy14511 249 WKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 249 ~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~ 315 (488)
++|++..|+.+-+..+.|..+|+..................++++ +.++++-...+.|..++..+++
T Consensus 173 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 173 LDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 999888888885677899999987533222223233445666664 4455555567888888887654
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.60 E-value=0.00032 Score=63.60 Aligned_cols=226 Identities=9% Similarity=-0.012 Sum_probs=142.3
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----eeeeeecccc
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHM 284 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~ 284 (488)
..++..+....|+..++.......+.. ....+..++|++.+..|+.+-...+.|+.+++... .....+....
T Consensus 83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~----~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp SCEEEEEETTEEEEECTTSCSCEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred cceeEEeccceeEEEccCCcceeEecc----ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 346666677899999998876655543 44578899999988888877466788988988652 1222232233
Q ss_pred ccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCC
Q psy14511 285 HQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDA 358 (488)
Q Consensus 285 ~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~ 358 (488)
.....+++ .+++.++-...+.|.+.++.... ....+...-.....++++|.+.+|+.+. + +.|...++.....
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS-EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCc-eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 34455555 34555565667889999987542 2233333344578999999776666554 3 7888888875432
Q ss_pred Ccccce----e-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee--ccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511 359 KRPLGL----I-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI--HQERILSAVLSPDQTCVAAASADETISI 431 (488)
Q Consensus 359 ~~~~~~----~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~i 431 (488)
...+.. . --++++++..|+.+ -...+.|..+|+........+.. .-....++++. .+..+.+-...+.|..
T Consensus 238 ~~~~~~~l~~P~glavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 238 YSLVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFS 315 (400)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEE
T ss_pred EEEEECCCCceEEEEEEeCCCEEEEE-ECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEE
Confidence 221111 1 11888888888775 45678899999864433222222 22345677773 3455556667788999
Q ss_pred EecCCCCccc
Q psy14511 432 WNCFPRDKKR 441 (488)
Q Consensus 432 w~~~~~~~~~ 441 (488)
++..+++...
T Consensus 316 ~~~~~G~~~~ 325 (400)
T 3p5b_L 316 ANRLTGSDVN 325 (400)
T ss_dssp EESSSCCCCE
T ss_pred EEcCCCCceE
Confidence 9977776553
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.60 E-value=9.3e-05 Score=66.85 Aligned_cols=221 Identities=7% Similarity=-0.039 Sum_probs=126.8
Q ss_pred CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW 91 (488)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 91 (488)
...|+..++.... ...... .......++|++.+..|.... .+.|..++.+..... .+ ..........+++.+.
T Consensus 95 ~~~I~~i~~~~~~-~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~--~~~~~~~p~glavd~~ 169 (386)
T 3v65_B 95 RIDIRQVLPHRSE-YTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EV--VSTGLESPGGLAVDWV 169 (386)
T ss_dssp BSCEEEECTTSCC-CEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE-EE--ECSSCSCCCCEEEETT
T ss_pred CccceeeccCCCc-EEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE-EE--EeCCCCCccEEEEEeC
Confidence 4568888887654 323333 334578999998666665554 789999998753311 11 1112234567888887
Q ss_pred CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511 92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF 171 (488)
Q Consensus 92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (488)
+..|+.+... .+.|.+.+++.......+........
T Consensus 170 ~g~lY~~d~~--~~~I~~~~~dg~~~~~l~~~~l~~P~------------------------------------------ 205 (386)
T 3v65_B 170 HDKLYWTDSG--TSRIEVANLDGAHRKVLLWQSLEKPR------------------------------------------ 205 (386)
T ss_dssp TTEEEEEETT--TTEEEECBTTSCSCEEEECSSCSCEE------------------------------------------
T ss_pred CCeEEEEcCC--CCeEEEEeCCCCceEEeecCCCCCCc------------------------------------------
Confidence 7777776653 67788877653321111110000000
Q ss_pred ecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-CC-CeEEEEECCCCceEEEEecCCCCCCceEEEEE
Q psy14511 172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-LD-TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW 249 (488)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d-~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~ 249 (488)
-..++...+.++.+. .. +.|..+++........... .-.....+++
T Consensus 206 -----------------------------giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~~~~PnGlav 253 (386)
T 3v65_B 206 -----------------------------AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---HLFWPNGLTI 253 (386)
T ss_dssp -----------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSCEEEEEE
T ss_pred -----------------------------EEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---CCCCeeeEEE
Confidence 000111223344433 33 6788888765544333321 3345789999
Q ss_pred cCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCC
Q psy14511 250 KPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 250 ~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~ 315 (488)
+|++..|+.+-...+.|..+|+........+.........+++ .+.++++-...+.|..++..+++
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 254 DYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence 9988888888567788999998754333333323334556666 45555666667888888865543
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.58 E-value=1.2e-05 Score=78.45 Aligned_cols=176 Identities=10% Similarity=0.074 Sum_probs=91.3
Q ss_pred EEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeeee-------eccccccEEEEEecCCEEEEeecC---------C
Q psy14511 246 CVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQK-------LRTHMHQVIAMCWNGNLLSCGTIG---------G 304 (488)
Q Consensus 246 ~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~~-------~~~~~~~v~~~~~~~~~l~~~~~d---------g 304 (488)
+++..++++.++++|..+ ..+.+||..+.+-... +...... ..+..++..++.++.+ .
T Consensus 291 s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~ 369 (656)
T 1k3i_A 291 SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPST 369 (656)
T ss_dssp EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCcc
Confidence 344556777777773233 4688888877543221 0000000 0001134444555443 4
Q ss_pred eEEEEECcCCCccceeeecCC---------ccEEEEEEcc-CCcEEEEEe-cC-----------eEEEEECCCCCCCc--
Q psy14511 305 NILHYDVRTHSDYPTAITREG---------DVVCGLKWSP-NGRYLASGS-NN-----------TVKIWDFRQLDAKR-- 360 (488)
Q Consensus 305 ~i~i~d~~~~~~~~~~~~~~~---------~~i~~~~~s~-~~~~l~~~~-d~-----------~i~iwd~~~~~~~~-- 360 (488)
.+..||..+..- ......+. ..-.++.|.. ++++++.|+ ++ .+.+||..+..-..
T Consensus 370 ~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 370 AMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp EEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred ceeeeecCCcce-eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 567888876531 11111111 1123444443 778888876 22 67888876543211
Q ss_pred --c--cce-e-eeeecCCCCEEEEEccCCC-----------CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCCCEEE
Q psy14511 361 --P--LGL-I-VPKLKREGRELVTSHGKQD-----------CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQTCVA 421 (488)
Q Consensus 361 --~--~~~-~-~~~~~~~~~~l~~~~g~~~-----------~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~ 421 (488)
. ... . .....|+++.+++ |+.+ ..+.+||..+.+-.. .+...........+.||++.++
T Consensus 449 ~~~mp~~R~~~~~~~l~~g~i~v~--GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v 526 (656)
T 1k3i_A 449 SNGLYFARTFHTSVVLPDGSTFIT--GGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFN 526 (656)
T ss_dssp TTCCSSCCBSCEEEECTTSCEEEE--CCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEE
T ss_pred cCCCCCCcccCCeEECCCCCEEEE--CCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEe
Confidence 1 111 1 1255679998888 4432 568999987754322 1111122223455679999999
Q ss_pred EEeC
Q psy14511 422 AASA 425 (488)
Q Consensus 422 t~~~ 425 (488)
.|+.
T Consensus 527 ~GG~ 530 (656)
T 1k3i_A 527 GGGG 530 (656)
T ss_dssp EECC
T ss_pred cCCC
Confidence 9985
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.56 E-value=0.0003 Score=62.47 Aligned_cols=221 Identities=7% Similarity=-0.040 Sum_probs=124.9
Q ss_pred CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecC
Q psy14511 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPW 91 (488)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 91 (488)
...|+..++.... ....+.. ......++|++.+..|.... .+.|..++.++.... .+ ..........+++.+.
T Consensus 52 ~~~I~~i~~~g~~-~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~--~~~~~~~p~glavd~~ 126 (349)
T 3v64_C 52 RIDIRQVLPHRSE-YTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EV--VSTGLESPGGLAVDWV 126 (349)
T ss_dssp BSCEEEECTTSCC-EEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EE--ECSSCSCCCEEEEETT
T ss_pred ccceEEEeCCCCe-eEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce-EE--EeCCCCCccEEEEecC
Confidence 4457777776543 2222333 33478999998766666554 789999998753321 11 1112234578899887
Q ss_pred CCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccceee
Q psy14511 92 EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQF 171 (488)
Q Consensus 92 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (488)
+..|+.+... .+.|.+.+++................
T Consensus 127 ~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~l~~P~------------------------------------------ 162 (349)
T 3v64_C 127 HDKLYWTDSG--TSRIEVANLDGAHRKVLLWQSLEKPR------------------------------------------ 162 (349)
T ss_dssp TTEEEEEETT--TTEEEEEETTSCSCEEEECTTCSCEE------------------------------------------
T ss_pred CCeEEEEcCC--CCeEEEEcCCCCceEEEEeCCCCCcc------------------------------------------
Confidence 7777777653 77898888754321111110000000
Q ss_pred ecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-CC-CeEEEEECCCCceEEEEecCCCCCCceEEEEE
Q psy14511 172 LRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-LD-TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW 249 (488)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d-~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~ 249 (488)
-..++...+.++.+. .. +.|..+++........... .-.....+++
T Consensus 163 -----------------------------~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~~~~PnGla~ 210 (349)
T 3v64_C 163 -----------------------------AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---HLFWPNGLTI 210 (349)
T ss_dssp -----------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS---SCSCEEEEEE
T ss_pred -----------------------------eEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---CCCCcceEEE
Confidence 000111223344333 33 6788887765433222211 3345789999
Q ss_pred cCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCC
Q psy14511 250 KPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 250 ~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~ 315 (488)
+|++..|+.+-...+.|..+++........+.........+++ .+.+.++-...+.|..++..+++
T Consensus 211 d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 211 DYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 9988888888567788999998754332223222334455665 44555555566778888755543
No 277
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.53 E-value=0.00083 Score=64.61 Aligned_cols=103 Identities=9% Similarity=-0.037 Sum_probs=66.4
Q ss_pred eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCccccccccccee
Q psy14511 7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVK 84 (488)
Q Consensus 7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~ 84 (488)
+|+.+ ..+.|+..|+.+...........-.....|+|++.+..|..+. ++.|..++++... ...+ ...-.....
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~~~v--~~~g~~~P~ 83 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-LEHV--VEFGLDYPE 83 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEE--ECSSCSCCC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-cEEE--EeCCCCCcc
Confidence 44443 5778999999875422111112334578999999777666654 7999999887532 2222 111123567
Q ss_pred EEEEecCCCeEEeeeCCcccceEEEEecCCC
Q psy14511 85 AIAWCPWEPTLLATGGGICDQTVRLWNSMNG 115 (488)
Q Consensus 85 ~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~ 115 (488)
.|++.+.+..|+.+... .+.|.+.++...
T Consensus 84 GlAvD~~~~~LY~tD~~--~~~I~v~~~dG~ 112 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTG--TNRIEVSKLDGQ 112 (628)
T ss_dssp EEEEETTTTEEEEEETT--TTEEEEEETTST
T ss_pred eEEEEeCCCEEEEEECC--CCEEEEEecCCC
Confidence 88898877778777664 788888887543
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.49 E-value=0.00034 Score=61.11 Aligned_cols=224 Identities=10% Similarity=-0.001 Sum_probs=136.9
Q ss_pred cEEEEECCCeEEEEECCCCc--eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee-eeecccccc
Q psy14511 210 DTLAVALDTSVYTWNTKTNK--TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI-QKLRTHMHQ 286 (488)
Q Consensus 210 ~~~~~~~d~~v~iw~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~ 286 (488)
-++..+....|+.+++.... ...... .......++|++.+..|+.+-...+.|..+++...... ..+...-..
T Consensus 5 p~ll~~~~~~I~~i~l~~~~~~~~~~~~----~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 5 PLLLYANRRDLRLVDATNGKENATIVVG----GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp CEEEEECEEEEEEEETTCTTSCCEEEEE----EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred cEEEEEccCeEEEEECCCCceEEEEEec----CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence 35566667889999998764 222222 22356789999977777777467788999998765321 112111122
Q ss_pred E--EEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCc
Q psy14511 287 V--IAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKR 360 (488)
Q Consensus 287 v--~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~ 360 (488)
. .++.+ .+++.++-...+.|.++++.... ..............++++|.+..|+.+. . +.|...++.......
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 3 34444 34555665667899999987532 2222323445578999999766666554 2 788888876432211
Q ss_pred ccce-e----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy14511 361 PLGL-I----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF 435 (488)
Q Consensus 361 ~~~~-~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~ 435 (488)
.... + --++++++..|+.+ -...+.|..+|+........+.+.......+++.. +..+.+-...+.|..++..
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWA-DAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCccEEEEeccCCEEEEE-ECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECC
Confidence 1111 1 11889887777775 56678999999864332222232344567777753 3455555567889999987
Q ss_pred CCCcc
Q psy14511 436 PRDKK 440 (488)
Q Consensus 436 ~~~~~ 440 (488)
+++..
T Consensus 238 ~G~~~ 242 (318)
T 3sov_A 238 TGEGL 242 (318)
T ss_dssp TCCSC
T ss_pred CCCce
Confidence 77654
No 279
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.46 E-value=5.1e-05 Score=66.87 Aligned_cols=193 Identities=7% Similarity=-0.025 Sum_probs=120.3
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-------------------cccccEEEEEec--CCEEEEe
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-------------------THMHQVIAMCWN--GNLLSCG 300 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-------------------~~~~~v~~~~~~--~~~l~~~ 300 (488)
....+++++++++.++++ ..++.|..|+..+++...... ........++++ +..|+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTS-VQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEE-CTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEE-cCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 345678899998878877 888999999887643321110 011346778774 4567777
Q ss_pred ecCCeEEEEECcCCCccceeeec-----CCccEEEEEEcc-CCcEEEEEec------------------CeEEEEECCCC
Q psy14511 301 TIGGNILHYDVRTHSDYPTAITR-----EGDVVCGLKWSP-NGRYLASGSN------------------NTVKIWDFRQL 356 (488)
Q Consensus 301 ~~dg~i~i~d~~~~~~~~~~~~~-----~~~~i~~~~~s~-~~~~l~~~~d------------------~~i~iwd~~~~ 356 (488)
...+.+..+|..++. ...+.. .......+++.| +|++.++... +.+..||..++
T Consensus 98 d~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp ETTTEEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred ECCCCEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 666668888876432 122211 113467899999 9987776432 57888887655
Q ss_pred CCCccccee----eeeecCCCCEEEEEccCCCCeEEEEeCCCcc--eeEEEeeccccEEEEEEcCCCCEEEEEeC-----
Q psy14511 357 DAKRPLGLI----VPKLKREGRELVTSHGKQDCSLKMWEYPRLH--LIEELKIHQERILSAVLSPDQTCVAAASA----- 425 (488)
Q Consensus 357 ~~~~~~~~~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~t~~~----- 425 (488)
+........ -.+++++++.++++ ....+.|..|++.... ....+....+ ...+++.++|+++++...
T Consensus 176 ~~~~~~~~~~~p~gia~~~dg~~lyv~-d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 176 ETTLLLKELHVPGGAEVSADSSFVLVA-EFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEEEEESCCCEEEECTTSSEEEEE-EGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEEeccCCccCcceEECCCCCEEEEE-eCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence 432211111 11899999977664 3456889999987421 1122221223 788999999987777654
Q ss_pred -----CCcEEEEecCCCCcc
Q psy14511 426 -----DETISIWNCFPRDKK 440 (488)
Q Consensus 426 -----dg~v~iw~~~~~~~~ 440 (488)
.+.|..+|.. ++..
T Consensus 254 ~~~~~~~~v~~~d~~-G~~~ 272 (322)
T 2fp8_A 254 MHGRVDPKGIKFDEF-GNIL 272 (322)
T ss_dssp TTSCEEEEEEEECTT-SCEE
T ss_pred ccCCCccEEEEECCC-CCEE
Confidence 4567777764 4433
No 280
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.46 E-value=0.00018 Score=63.26 Aligned_cols=221 Identities=13% Similarity=0.098 Sum_probs=127.9
Q ss_pred EEEEECCCeEEEEECCCCceEEEEecCCC----------------CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511 211 TLAVALDTSVYTWNTKTNKTQLLVEYPTY----------------DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE 274 (488)
Q Consensus 211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~----------------~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~ 274 (488)
+++...++.|..|+..+++.......... ....+..+++.+++..|+++ ...+.+..+|..++
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~-d~~~~i~~~d~~~g 111 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV-DCYYHLSVVGSEGG 111 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE-ETTTEEEEECTTCE
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE-ECCCCEEEEeCCCC
Confidence 77777889999999887654432211100 01357889999833355555 44555888887754
Q ss_pred eeeeeec----c-ccccEEEEEec---CCEEEEeec-----------------CCeEEEEECcCCCccceeeecCCccEE
Q psy14511 275 RLIQKLR----T-HMHQVIAMCWN---GNLLSCGTI-----------------GGNILHYDVRTHSDYPTAITREGDVVC 329 (488)
Q Consensus 275 ~~~~~~~----~-~~~~v~~~~~~---~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~i~ 329 (488)
.. ..+. + .......++++ |++.++-.. ++.|..||..++. . ..+...-....
T Consensus 112 ~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-~-~~~~~~~~~p~ 188 (322)
T 2fp8_A 112 HA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE-T-TLLLKELHVPG 188 (322)
T ss_dssp EC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE-E-EEEEEEESCCC
T ss_pred EE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE-E-EEeccCCccCc
Confidence 32 2221 1 11234566663 444444322 3678888876543 1 11111112345
Q ss_pred EEEEccCCcEEEEEe-c-CeEEEEECCCCCCC--ccccee--e--eeecCCCCEEEEEcc--------CCCCeEEEEeCC
Q psy14511 330 GLKWSPNGRYLASGS-N-NTVKIWDFRQLDAK--RPLGLI--V--PKLKREGRELVTSHG--------KQDCSLKMWEYP 393 (488)
Q Consensus 330 ~~~~s~~~~~l~~~~-d-~~i~iwd~~~~~~~--~~~~~~--~--~~~~~~~~~l~~~~g--------~~~~~i~i~d~~ 393 (488)
.++++|+++.|..+. . +.|.+|++...... ..+... . .++.++|++.++..+ ...+.|..+|.
T Consensus 189 gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~- 267 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE- 267 (322)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-
Confidence 799999999777665 3 89999998753211 111110 1 177888886666422 11466888886
Q ss_pred CcceeEEEeecc----ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy14511 394 RLHLIEELKIHQ----ERILSAVLSPDQTCVAAASADETISIWNCFPR 437 (488)
Q Consensus 394 ~~~~~~~~~~~~----~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~ 437 (488)
.++.+..+.... ..++.+++ .+++++++....+.|..+++...
T Consensus 268 ~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 268 FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 477777765442 34666766 46666666667788999987643
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.45 E-value=0.00064 Score=59.46 Aligned_cols=228 Identities=9% Similarity=-0.039 Sum_probs=128.5
Q ss_pred eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEecccc---CcCCCccccccccc
Q psy14511 7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQL---DAKRPQVNNQCHLS 81 (488)
Q Consensus 7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~---~~~~~~~~~~~h~~ 81 (488)
+|+.+. ...|+..|+.+.... ..+ ........++|++++..|..+. ++.|..++..+. .....+ ....-.
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~-~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~--~~~~~~ 77 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYT-SLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQ 77 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCE-EEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE--ECSSCS
T ss_pred EEEEEC-CCeEEEEECCCcceE-ehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE--EeCCCC
Confidence 344444 456999999876532 333 2344578999999776665554 789999998751 111111 111223
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecc
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQ 161 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (488)
....+++.+.+..|+.+... .+.|.+.++........+........
T Consensus 78 ~p~glavd~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~P~-------------------------------- 123 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPR-------------------------------- 123 (316)
T ss_dssp CCCEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECTTCCEE--------------------------------
T ss_pred CcCEEEEeecCCeEEEEECC--CCEEEEEeCCCCceEEEEECCCCCcc--------------------------------
Confidence 46788998766677776553 78899998754322111110000000
Q ss_pred ccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEEC-C-CeEEEEECCCCceEEEEecCCC
Q psy14511 162 SKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL-D-TSVYTWNTKTNKTQLLVEYPTY 239 (488)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d-~~v~iw~~~~~~~~~~~~~~~~ 239 (488)
-..++...+.++.+.. . +.|...++...........
T Consensus 124 ---------------------------------------~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~--- 161 (316)
T 1ijq_A 124 ---------------------------------------AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--- 161 (316)
T ss_dssp ---------------------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---
T ss_pred ---------------------------------------eEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC---
Confidence 0001112334444443 2 6788887764433222221
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--cccccEEEEEec-CCEEEEeecCCeEEEEECcCCC
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--THMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~ 315 (488)
.-.....++++|++..|+.+-...+.|..+|+.......... ........++++ +.++++-...+.|..++..+++
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 334678999999888888885677899999987532211111 122334566664 4455555567788888876654
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.39 E-value=0.00096 Score=58.68 Aligned_cols=135 Identities=13% Similarity=0.145 Sum_probs=71.8
Q ss_pred CCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEEC--Ccceeeeeeccccc
Q psy14511 208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHE--QEERLIQKLRTHMH 285 (488)
Q Consensus 208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~--~~~~~~~~~~~~~~ 285 (488)
++.+++++.++.|+.- .+.++.-...... ....+..+++.|++..++++ ...+..+-.|- .+.+.+. .....
T Consensus 132 ~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~--~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~ 205 (327)
T 2xbg_A 132 NGSAEMITNVGAIYRT-KDSGKNWQALVQE--AIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSR 205 (327)
T ss_dssp TTEEEEEETTCCEEEE-SSTTSSEEEEECS--CCCCEEEEEECTTSCEEEEE-TTSSEEEEECTTCSSCEEEE--CCSSS
T ss_pred CCCEEEEeCCccEEEE-cCCCCCCEEeecC--CCcceEEEEEcCCCcEEEEE-CCCcEEEEeCCCCCceeECC--CCCCC
Confidence 3456666666654332 2223322222221 45578899999998877766 44333333342 2222321 23445
Q ss_pred cEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeee---cCCccEEEEEEccCCcEEEEEecCeE
Q psy14511 286 QVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAIT---REGDVVCGLKWSPNGRYLASGSNNTV 348 (488)
Q Consensus 286 ~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d~~i 348 (488)
.+..+.+ .+..++.++.+|.+++.+...+..-..... .....+..+++.+++..++++.++.+
T Consensus 206 ~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i 272 (327)
T 2xbg_A 206 RLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL 272 (327)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE
T ss_pred ccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE
Confidence 6777777 223445566678877764221211111111 12234788899988888887766655
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.39 E-value=0.0012 Score=59.80 Aligned_cols=230 Identities=9% Similarity=-0.034 Sum_probs=131.4
Q ss_pred eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCC-Ccccccccccce
Q psy14511 7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKR-PQVNNQCHLSAV 83 (488)
Q Consensus 7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~-~~~~~~~h~~~v 83 (488)
+|+.+ ....|+..|+.... ... +......+..|+|++.+..|..+. .+.|+.+++....... ............
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~-~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSE-YTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCS-CEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEe-ccceeEEEccCCcc-eeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 34433 35688888887664 222 333445688999999766666654 7899999886422101 111112123457
Q ss_pred eEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccc
Q psy14511 84 KAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSK 163 (488)
Q Consensus 84 ~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (488)
..+++.+.+..|+.+... .+.|.+.+++.......+.........
T Consensus 162 ~glavD~~~~~lY~~d~~--~~~I~~~~~~g~~~~~l~~~~~~~P~~--------------------------------- 206 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPRA--------------------------------- 206 (400)
T ss_dssp EEEEEETTTTEEEEEETT--TTEEEEECTTTCSEEEEEECSSCCEEE---------------------------------
T ss_pred ccEEEEecCCceEEEECC--CCeEEEEeCCCCceEEEEeCCCCCcce---------------------------------
Confidence 788998866677777663 788888887644322221111000000
Q ss_pred ccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCC
Q psy14511 164 RTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDN 241 (488)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~ 241 (488)
..++...+.++.+. ..+.|...++........... .-
T Consensus 207 --------------------------------------iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~---~l 245 (400)
T 3p5b_L 207 --------------------------------------IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NI 245 (400)
T ss_dssp --------------------------------------EEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS---SC
T ss_pred --------------------------------------EEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC---CC
Confidence 00111223344333 236777777765443333321 33
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEec-CCEEEEeecCCeEEEEECcCCC
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~ 315 (488)
.....+++++++..|+.+-...+.|..+|+........... .......++.+ +.++++-...+.|..+|..+++
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence 56789999998888888856678899999875433222221 22344566664 4555566667888888876654
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=0.00018 Score=65.95 Aligned_cols=217 Identities=10% Similarity=0.109 Sum_probs=123.6
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC----cEEEEECCcceee--eeecc
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE----YIDLWHEQEERLI--QKLRT 282 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----~i~i~d~~~~~~~--~~~~~ 282 (488)
+.++++...+.|+.+|+.++....... .......++++++++.|+++...++ .+..++.. +... ..+..
T Consensus 150 g~Lyv~d~~~~I~~id~~~~~v~~~~~----~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~ 224 (430)
T 3tc9_A 150 NHLYLVGEQHPTRLIDFEKEYVSTVYS----GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK 224 (430)
T ss_dssp EEEEEEEBTEEEEEEETTTTEEEEEEC----CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE
T ss_pred CeEEEEeCCCcEEEEECCCCEEEEEec----CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc
Confidence 566666655899999998877555443 3456889999999997777733222 23334432 2211 12211
Q ss_pred ccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe-c-CeEEEEECCCC-
Q psy14511 283 HMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N-NTVKIWDFRQL- 356 (488)
Q Consensus 283 ~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~~- 356 (488)
......+++ ++.++++-..++.|+.++....................++|+|+|++|..+. . +.|..++....
T Consensus 225 -~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~ 303 (430)
T 3tc9_A 225 -GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKT 303 (430)
T ss_dssp -CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred -CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccc
Confidence 112234444 4566666667789999998764321111111223467899999999766665 4 89999886532
Q ss_pred -CC--Ccc-------------------cceee-e-ee--------cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec
Q psy14511 357 -DA--KRP-------------------LGLIV-P-KL--------KREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH 404 (488)
Q Consensus 357 -~~--~~~-------------------~~~~~-~-~~--------~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~ 404 (488)
.. ... +.... . +. .++|...++ -...+.|+.++ .+++... +.+.
T Consensus 304 ~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva--D~~n~~I~~i~-~~G~v~~-~~g~ 379 (430)
T 3tc9_A 304 KRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC--DRENHCIRILT-PQGRVTT-FAGR 379 (430)
T ss_dssp TEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE--EGGGTEEEEEC-TTSEEEE-EEEC
T ss_pred ccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE--ECCCcEEEEEC-CCCcEEE-EEeC
Confidence 10 000 00000 1 11 122444444 44567788888 4554333 3221
Q ss_pred ---------c---------ccEEEEEEcCC-CCEEEEEeCCCcEEEEecC
Q psy14511 405 ---------Q---------ERILSAVLSPD-QTCVAAASADETISIWNCF 435 (488)
Q Consensus 405 ---------~---------~~v~~~~~s~~-~~~l~t~~~dg~v~iw~~~ 435 (488)
. .....++++|+ +.++++-.....|+.++++
T Consensus 380 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 380 GSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 1 14789999995 5555555566778877754
No 285
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.36 E-value=0.0022 Score=61.70 Aligned_cols=419 Identities=8% Similarity=0.000 Sum_probs=209.9
Q ss_pred cc-CCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec---CCeEEEEeccccCcCCCccccc
Q psy14511 2 CW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS---NNTVKIWDFRQLDAKRPQVNNQ 77 (488)
Q Consensus 2 ~~-dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~---d~~i~vwd~~~~~~~~~~~~~~ 77 (488)
.| ++++..+-...+.|.+.++.... ....+...-.....|++.|...+|.... .+.|...+++... ...+.
T Consensus 88 D~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~--- 162 (628)
T 4a0p_A 88 DWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLV--- 162 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEE---
T ss_pred EeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEE---
Confidence 35 35555565667889999886543 2222334445578999999555554443 5788888876432 22221
Q ss_pred ccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCcccccccccccc-------ccceeEEEEEee
Q psy14511 78 CHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ-------KKRRHLSFLLHG 150 (488)
Q Consensus 78 ~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 150 (488)
..-.....|++.++++.|+.+-.. .+.|...++..... ..+.........++ .+.. ....+..+...
T Consensus 163 ~~~~~P~GlalD~~~~~LY~aD~~--~~~I~~~d~dG~~~-~v~~~~l~~P~gla--v~~~~ly~tD~~~~~I~~~dk~- 236 (628)
T 4a0p_A 163 PNVGRANGLTIDYAKRRLYWTDLD--TNLIESSNMLGLNR-EVIADDLPHPFGLT--QYQDYIYWTDWSRRSIERANKT- 236 (628)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSC-EEEEECCSCEEEEE--EETTEEEEEETTTTEEEEEETT-
T ss_pred CCCCCcceEEEccccCEEEEEECC--CCEEEEEcCCCCce-EEeeccCCCceEEE--EECCEEEEecCCCCEEEEEECC-
Confidence 133567899999988888888764 78899999865433 22222111111111 1110 00001111000
Q ss_pred eeccccceeccccc-cccceeeeccccc--cccccc-CCC-ceeecCCCccccceeee-----------eeeCCCcEEEE
Q psy14511 151 FEIDRKKVLNQSKR-TVSPTQFLRTLGK--LPRKVK-AKP-ERILEAPSIINDFYTSG-----------LDWGYHDTLAV 214 (488)
Q Consensus 151 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~-~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 214 (488)
.-....++..... ......+....+. .+.... ... ...+..+. ..+.+.+ -+.....++..
T Consensus 237 -tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~--~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~ 313 (628)
T 4a0p_A 237 -SGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPV--GGFVCGCPAHYSLNADNRTCSAPTTFLLF 313 (628)
T ss_dssp -TCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETT--TEEEEECSTTCEECTTSSCEECCSSEEEE
T ss_pred -CCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCC--CCeeEEcCCCcEecccCCcCccccceeee
Confidence 0000011110000 0000000000000 000000 000 00000000 0000000 01123445666
Q ss_pred ECCCeEEEEECCCCce-EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc------ccccE
Q psy14511 215 ALDTSVYTWNTKTNKT-QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT------HMHQV 287 (488)
Q Consensus 215 ~~d~~v~iw~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~------~~~~v 287 (488)
+....|+-..+..... ...+... .-..+..++|.+..+.|+.+-...+.|+.+++........+.. .....
T Consensus 314 s~~~~i~~i~l~~~~~~~~~l~~~--~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p 391 (628)
T 4a0p_A 314 SQKSAINRMVIDEQQSPDIILPIH--SLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQP 391 (628)
T ss_dssp EETTEEEEECCCTTCCCCEECCCT--TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCE
T ss_pred eccceEEEEecccccCceEEEEeh--hcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCc
Confidence 6667777666654322 1122222 3356889999998888888745678888888765332222221 22345
Q ss_pred EEEEec--CC-EEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccC-CcEEEEEec-C--eEEEEECCCCCCCc
Q psy14511 288 IAMCWN--GN-LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN-GRYLASGSN-N--TVKIWDFRQLDAKR 360 (488)
Q Consensus 288 ~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~d-~--~i~iwd~~~~~~~~ 360 (488)
..+++| ++ +.++-+..+.|.+.++... .....+...-....+++++|. |.++.+-.. . .|...++.......
T Consensus 392 ~glAvD~~~~nLY~td~~~~~I~v~~~~G~-~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~ 470 (628)
T 4a0p_A 392 YDLSIDIYSRYIYWTCEATNVINVTRLDGR-SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREV 470 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSC-EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEE
T ss_pred ceEEeeccCCeEEEEcCCCCEEEEEECCCC-eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEE
Confidence 666663 44 5556667889999998642 222223334456889999994 544444332 3 57777765332211
Q ss_pred ccc----eee-eeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-eccccEEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy14511 361 PLG----LIV-PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-IHQERILSAVLSPDQTCVAAASADETISIWNC 434 (488)
Q Consensus 361 ~~~----~~~-~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~ 434 (488)
... ... -++.++++.|+.+ -...+.|...++. |.....+. .......+++... +..+.+=.....|...|.
T Consensus 471 l~~~~l~~P~gla~D~~~~~LYw~-D~~~~~I~~~~~d-G~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k 547 (628)
T 4a0p_A 471 LFFSGLSKPIALALDSRLGKLFWA-DSDLRRIESSDLS-GANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDM 547 (628)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETT-SCSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred EEeccCCCccEEEEeCCCCEEEEE-eCCCCEEEEEeCC-CCceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEEC
Confidence 111 111 1778877777765 4556889999985 33344443 3334567777754 444455556677888887
Q ss_pred CCCCcc
Q psy14511 435 FPRDKK 440 (488)
Q Consensus 435 ~~~~~~ 440 (488)
.+++..
T Consensus 548 ~~G~~~ 553 (628)
T 4a0p_A 548 TGREGR 553 (628)
T ss_dssp TSSSCC
T ss_pred cCCCCc
Confidence 766643
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.33 E-value=0.00036 Score=63.92 Aligned_cols=222 Identities=9% Similarity=-0.009 Sum_probs=125.3
Q ss_pred eeeeCC----CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC-----cEEEEECCc
Q psy14511 203 GLDWGY----HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE-----YIDLWHEQE 273 (488)
Q Consensus 203 ~~~~~~----~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-----~i~i~d~~~ 273 (488)
.+.+++ +.++.+...+.|+.++..++....... .......++++++++ |+++ ...+ .+...+...
T Consensus 143 gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~----~~~~P~giavd~dG~-lyVa-d~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT----NIGQCADVNFTLNGD-MVVV-DDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC----CCSCEEEEEECTTCC-EEEE-ECCSCTTSEEEEEECGGG
T ss_pred eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec----CCCCccEEEECCCCC-EEEE-cCCCCcccceEEEEECCC
Confidence 355553 566666655899999998887655433 345688999999999 6555 3321 233333221
Q ss_pred cee-eeeeccccccEEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeec-CCccEEEEEEccCCcEEEEEe-c-C
Q psy14511 274 ERL-IQKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITR-EGDVVCGLKWSPNGRYLASGS-N-N 346 (488)
Q Consensus 274 ~~~-~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~-d-~ 346 (488)
+.. ...+. .......+++ ++.+.++-..++.|+.+|..++......... ....-..++|+|++++|..+. . +
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 110 01111 1112233444 3555555556788999998754321112111 122234699999999776666 3 8
Q ss_pred eEEEEECCC--CCCC--cc-------------------cceee-eee---------cCCCCEEEEEccCCCCeEEEEeCC
Q psy14511 347 TVKIWDFRQ--LDAK--RP-------------------LGLIV-PKL---------KREGRELVTSHGKQDCSLKMWEYP 393 (488)
Q Consensus 347 ~i~iwd~~~--~~~~--~~-------------------~~~~~-~~~---------~~~~~~l~~~~g~~~~~i~i~d~~ 393 (488)
.|+.++... .... .. +.... .++ .++|...++ ....+.|+.++.
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyva--D~~n~~I~~~~~- 372 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFC--DRDSHTVRVLTP- 372 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEE--ETTTTEEEEECT-
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEE--ECCCCEEEEECC-
Confidence 999988652 2110 00 00001 155 555655555 566788998884
Q ss_pred CcceeEEEeec------------------cccEEEEEEc-CCCCEEEEEeCCCcEEEEecC
Q psy14511 394 RLHLIEELKIH------------------QERILSAVLS-PDQTCVAAASADETISIWNCF 435 (488)
Q Consensus 394 ~~~~~~~~~~~------------------~~~v~~~~~s-~~~~~l~t~~~dg~v~iw~~~ 435 (488)
++... ++.+. -.....++++ +++.++++-...+.|+..+++
T Consensus 373 ~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 55433 33221 1236789999 566666666667788887764
No 287
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.31 E-value=0.00033 Score=58.37 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=52.3
Q ss_pred eecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEE
Q psy14511 31 AITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVR 108 (488)
Q Consensus 31 ~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~ 108 (488)
.+.+-.+.+..++|+|+++.|.+.. ++.|...|.. ++..+.+ .+.+ ......|++.+++.++++.-. ++.+.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i-~l~g-~~D~EGIa~~~~g~~~vs~E~---~~~l~ 94 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI-PLDF-VKDLETIEYIGDNQFVISDER---DYAIY 94 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE-ECSS-CSSEEEEEECSTTEEEEEETT---TTEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE-ecCC-CCChHHeEEeCCCEEEEEECC---CCcEE
Confidence 3445556799999999877666654 7888888876 4433322 1222 246778888888865454333 77888
Q ss_pred EEecCCC
Q psy14511 109 LWNSMNG 115 (488)
Q Consensus 109 vwd~~~~ 115 (488)
++++...
T Consensus 95 ~~~v~~~ 101 (255)
T 3qqz_A 95 VISLTPN 101 (255)
T ss_dssp EEEECTT
T ss_pred EEEcCCC
Confidence 8887544
No 288
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.27 E-value=0.0013 Score=54.85 Aligned_cols=194 Identities=11% Similarity=0.135 Sum_probs=121.7
Q ss_pred ecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc-ccccEEEEEe--cCCEEEEeecCCeEEEEEC
Q psy14511 235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT-HMHQVIAMCW--NGNLLSCGTIGGNILHYDV 311 (488)
Q Consensus 235 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~ 311 (488)
.+++ ....+..++++|+++.|++....++.|...|.. ++.++.+.- .....-.+++ ++.++++.-.++.+.++++
T Consensus 21 ~l~g-~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAG-ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTT-CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ECCC-cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4555 556899999999887777654778899999988 777776642 2245667777 4555566556778999987
Q ss_pred cCCCc--cceee------ecCCccEEEEEEccCCcEEEEEec-CeEEEEECCCC---CCCccc-----------cee-ee
Q psy14511 312 RTHSD--YPTAI------TREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQL---DAKRPL-----------GLI-VP 367 (488)
Q Consensus 312 ~~~~~--~~~~~------~~~~~~i~~~~~s~~~~~l~~~~d-~~i~iwd~~~~---~~~~~~-----------~~~-~~ 367 (488)
..... ..... ...+.....++|+|.++.|.++.+ ....+|.+... .....+ ... .-
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 66442 11111 123445689999999977777774 44444444311 000100 011 11
Q ss_pred eecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeecc---------ccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511 368 KLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQ---------ERILSAVLSPDQTCVAAASADETISIWN 433 (488)
Q Consensus 368 ~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~t~~~dg~v~iw~ 433 (488)
++.|....+++. ......+..+|.. ++.+..+.-.. ..-..|+|.++|+..++ ++-..++.+.
T Consensus 179 ~~dp~tg~lliL-S~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVL-SHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEE-ETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEE-ECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 777766555554 5678889999965 55555443221 25689999999985555 6666555554
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.24 E-value=0.0037 Score=61.60 Aligned_cols=224 Identities=9% Similarity=-0.032 Sum_probs=127.5
Q ss_pred CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCcC-CCcccccccccceeEEEEec
Q psy14511 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDAK-RPQVNNQCHLSAVKAIAWCP 90 (488)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~ 90 (488)
...|+..++.... ... +......+..|+|.+....|..+. .+.|+.+++...... .....+.........|++.+
T Consensus 403 ~~~Ir~i~l~~~~-~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 403 RHEVRKMTLDRSE-YTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp BSSEEEECTTSCC-CEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred ccceeEeeccCCc-cee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 4567777776554 222 333345678999999666555554 788999998742110 11111222334567899998
Q ss_pred CCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceecccccccccee
Q psy14511 91 WEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQ 170 (488)
Q Consensus 91 ~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (488)
.++.|+.+... .+.|.+.++........+........
T Consensus 481 ~~~~LY~tD~~--~~~I~v~~ldG~~~~~l~~~~l~~P~----------------------------------------- 517 (791)
T 3m0c_C 481 IHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPR----------------------------------------- 517 (791)
T ss_dssp TTTEEEEEETT--TTEEEEEETTSSSEEEEEECTTCCEE-----------------------------------------
T ss_pred cCCcEEEEecC--CCeEEEEeCCCCeEEEEEeCCCCCcc-----------------------------------------
Confidence 88888887764 78999999864332211111100000
Q ss_pred eecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-C-CCeEEEEECCCCceEEEEecCCCCCCceEEEE
Q psy14511 171 FLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-L-DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVA 248 (488)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~ 248 (488)
-..+++..+.++.+. . .+.|...++.......+... .-.....|+
T Consensus 518 ------------------------------gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~---~l~~P~GLa 564 (791)
T 3m0c_C 518 ------------------------------AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNGIT 564 (791)
T ss_dssp ------------------------------EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---SCSCEEEEE
T ss_pred ------------------------------eEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC---CCCCceEEE
Confidence 001222224444443 2 26788888765544433332 335688999
Q ss_pred EcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc--ccccEEEEEecCC-EEEEeecCCeEEEEECcCCC
Q psy14511 249 WKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT--HMHQVIAMCWNGN-LLSCGTIGGNILHYDVRTHS 315 (488)
Q Consensus 249 ~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~ 315 (488)
+++.+..|+.+-...+.|..+++........+.. .-....+|++.+. ++++-...+.|...|..+++
T Consensus 565 vD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 565 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCc
Confidence 9988888888856677899999876433333322 2234456666444 44444556778888876654
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.24 E-value=0.0039 Score=61.43 Aligned_cols=225 Identities=9% Similarity=-0.026 Sum_probs=136.1
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc----eeeeeecccc
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE----RLIQKLRTHM 284 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~----~~~~~~~~~~ 284 (488)
..++..+....|+..++.......+.. ....+..++|++....|+.+....+.|+.+++... .....+....
T Consensus 395 ~p~Ll~an~~~Ir~i~l~~~~~~~l~~----~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l 470 (791)
T 3m0c_C 395 IAYLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 470 (791)
T ss_dssp CCEEEEECBSSEEEECTTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred ccccccccccceeEeeccCCcceeeec----CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence 345666677788888888776555443 34567899999977777777466788988888752 2222232222
Q ss_pred ccEEEEEe--cC-CEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCC
Q psy14511 285 HQVIAMCW--NG-NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDA 358 (488)
Q Consensus 285 ~~v~~~~~--~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~ 358 (488)
.....|++ .+ ++.++-...+.|.+.++.... ....+...-.....|+++|.+.+|+.+. . +.|...++.....
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~ 549 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 549 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce
Confidence 33334444 34 555566677899999987532 2223333444578999999866666654 3 6788888875432
Q ss_pred Cccccee-----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeec--cccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511 359 KRPLGLI-----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH--QERILSAVLSPDQTCVAAASADETISI 431 (488)
Q Consensus 359 ~~~~~~~-----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~t~~~dg~v~i 431 (488)
...+... -.++.+.+..|+.+ -...+.|..+++........+... -....+|++.. ++++++-...+.|..
T Consensus 550 ~~lv~~~l~~P~GLavD~~~~~LYwa-D~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 550 YSLVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS 627 (791)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCceEEEEecCCCeEEEE-eCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEE
Confidence 2111111 11777777777765 456678999998654333333321 22345676633 344444446678888
Q ss_pred EecCCCCcc
Q psy14511 432 WNCFPRDKK 440 (488)
Q Consensus 432 w~~~~~~~~ 440 (488)
.+..+++..
T Consensus 628 ~dk~tG~~~ 636 (791)
T 3m0c_C 628 ANRLTGSDV 636 (791)
T ss_dssp EETTTCCCC
T ss_pred EeCCCCcce
Confidence 887777554
No 291
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.24 E-value=0.0018 Score=59.26 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=44.8
Q ss_pred CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511 209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ 272 (488)
Q Consensus 209 ~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~ 272 (488)
+.++.+. ..+.|+.++..++......... .......++|+|++++|+++....+.|..++..
T Consensus 238 g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~--~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 238 GELYFNSWNAGQVFRYDFTTQETTPLFTIQ--DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEEECS--SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEEEcC--CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 4566555 6789999999877654444432 224578999999999777775778899998765
No 292
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.08 E-value=0.0037 Score=53.12 Aligned_cols=168 Identities=11% Similarity=0.096 Sum_probs=93.6
Q ss_pred ceEEEEEcCCCCeEEEEeC------CCCcEEEEECCcceeeeeeccccccEEEEEecCC-----EEEEeecC---CeEEE
Q psy14511 243 YISCVAWKPRTTDLAVTNT------CTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGN-----LLSCGTIG---GNILH 308 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~-----~l~~~~~d---g~i~i 308 (488)
.|..-..+++.++++..|- -.|.+.+|..+. +..+.+++|......+..+|+ +++.+... +.+++
T Consensus 153 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhI 231 (365)
T 2xzh_A 153 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 231 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEE
T ss_pred eEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 3445555666666655421 246789999876 566778888777766666432 34433332 58888
Q ss_pred EECcCCCccceeeecCCccEEEEEEccCCc--EEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCCCe
Q psy14511 309 YDVRTHSDYPTAITREGDVVCGLKWSPNGR--YLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS 386 (488)
Q Consensus 309 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 386 (488)
-++....... .........+-|.|+.. +=++- ..++.-..++. -..-|.
T Consensus 232 iEi~~~~~~~---~~f~kk~vdi~fppea~~DFPVam------------------------qvs~kygviyv--iTK~G~ 282 (365)
T 2xzh_A 232 IEVGTPPTGN---QPFPKKAVDVFFPPEAQNDFPVAM------------------------QISEKHDVVFL--ITKYGY 282 (365)
T ss_dssp EECSSCCTTC---CCCCCEEEEECCCTTCTTCCEEEE------------------------EEETTTTEEEE--EETTSE
T ss_pred EEcCCCCCCC---CCcccccceeeCCccccCCceEEE------------------------EecccCCEEEE--EeCCcE
Confidence 8885431000 11112233344444321 10000 11111111111 134667
Q ss_pred EEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511 387 LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK 440 (488)
Q Consensus 387 i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~ 440 (488)
+++||++++.++..-+-...+|..-+-..+..=++.....|.|.--.+++....
T Consensus 283 ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 283 IHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred EEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 888888888887777666777766666555555666668888888888776654
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=0.006 Score=56.12 Aligned_cols=62 Identities=8% Similarity=0.003 Sum_probs=42.4
Q ss_pred CcEEEEE-CCCeEEEEECC-------CCce------------EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511 209 HDTLAVA-LDTSVYTWNTK-------TNKT------------QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL 268 (488)
Q Consensus 209 ~~~~~~~-~d~~v~iw~~~-------~~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i 268 (488)
+.++++. .++.|+.+|+. ++.. ......+ .......++|+|+++.|+++-+..+.|+.
T Consensus 259 g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~--~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 259 GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA--DPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS--SSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC--CCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 5566555 77889999987 4543 1233332 34456899999999977777467888988
Q ss_pred EECC
Q psy14511 269 WHEQ 272 (488)
Q Consensus 269 ~d~~ 272 (488)
++..
T Consensus 337 id~d 340 (496)
T 3kya_A 337 SDYD 340 (496)
T ss_dssp EEEE
T ss_pred EecC
Confidence 6543
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.03 E-value=0.006 Score=53.55 Aligned_cols=139 Identities=7% Similarity=-0.014 Sum_probs=78.3
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecc----cc
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT----HM 284 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~----~~ 284 (488)
+.+++++.++.++.-+-..+..-...... ....+..+++.++++.++++ .+|.+++.+...++.-..+.. ..
T Consensus 174 ~~~~~~g~~G~~~~S~d~gG~tW~~~~~~--~~~~~~~~~~~~~g~~~~~~--~~G~~~~s~~D~G~tW~~~~~~~~~~~ 249 (327)
T 2xbg_A 174 GEYVAVSSRGSFYSTWEPGQTAWEPHNRT--TSRRLHNMGFTPDGRLWMIV--NGGKIAFSDPDNSENWGELLSPLRRNS 249 (327)
T ss_dssp SCEEEEETTSSEEEEECTTCSSCEEEECC--SSSCEEEEEECTTSCEEEEE--TTTEEEEEETTEEEEECCCBCTTSSCC
T ss_pred CcEEEEECCCcEEEEeCCCCCceeECCCC--CCCccceeEECCCCCEEEEe--CCceEEEecCCCCCeeEeccCCcccCC
Confidence 45677776666655432212211122221 45678899999998766555 678777765443444333321 22
Q ss_pred ccEEEEEec-CCEEEEeecCCeEEEEECcCCCccceeee---cCCccEEEEEEccCCcEEEEEecCeEEEEEC
Q psy14511 285 HQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAIT---REGDVVCGLKWSPNGRYLASGSNNTVKIWDF 353 (488)
Q Consensus 285 ~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~ 353 (488)
..+.++.+. +..+++++.+|.+ ++....+. .-..+. .....+.++.|.++++.++.+.+|.|.-++-
T Consensus 250 ~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 250 VGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQ-TWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp SCEEEEEESSSSCEEEEESTTCE-EEESSTTS-SCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred cceEEEEecCCCEEEEEeCCCeE-EEeCCCCc-ccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 357888883 3344444557766 34444333 222222 1234578888987777777777788776654
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.02 E-value=2.1e-05 Score=76.80 Aligned_cols=224 Identities=10% Similarity=0.004 Sum_probs=128.9
Q ss_pred EEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc----ceeeeeecccccc
Q psy14511 211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE----ERLIQKLRTHMHQ 286 (488)
Q Consensus 211 ~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~----~~~~~~~~~~~~~ 286 (488)
++..+..+.|+..++.+.+...++. ....+..++|++.+..|+.+-...+.|+.+++.. ......+......
T Consensus 379 ~ll~~~~~~I~~id~~~~~~~~~~~----~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~ 454 (699)
T 1n7d_A 379 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 454 (699)
T ss_dssp CBCCCCTTC-CEECTTSCCEECCSC----CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--
T ss_pred eEEecCccceEEEeCCCCcceeeec----cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCC
Confidence 3444455678888887766543332 2345678899998888887745668899999875 2222222111122
Q ss_pred EEEEEe---cCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEe--c-CeEEEEECCCCCCCc
Q psy14511 287 VIAMCW---NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--N-NTVKIWDFRQLDAKR 360 (488)
Q Consensus 287 v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--d-~~i~iwd~~~~~~~~ 360 (488)
...+++ .++++++-...+.|.++++.... ....+.........++++|.+.+|+.+. . +.|..+++.......
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence 234444 34555555667889999987532 2222222223456789999766665544 3 678887775432211
Q ss_pred ccce-e----eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEee--ccccEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy14511 361 PLGL-I----VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKI--HQERILSAVLSPDQTCVAAASADETISIWN 433 (488)
Q Consensus 361 ~~~~-~----~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~ 433 (488)
.+.. + -.+++|++..|+.+ -...+.|..+++........+.. .-.....|++..+ .++++....+.|..++
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~a-D~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWV-DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 611 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEE-ETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEE
T ss_pred EEeCCCCCccEEEEeccCCEEEEE-ecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEE
Confidence 1111 1 12888887766665 45678899999864332222221 1123445666443 4455555678999999
Q ss_pred cCCCCccc
Q psy14511 434 CFPRDKKR 441 (488)
Q Consensus 434 ~~~~~~~~ 441 (488)
..+++...
T Consensus 612 ~~~G~~~~ 619 (699)
T 1n7d_A 612 RLTGSDVN 619 (699)
T ss_dssp TTTEEEEE
T ss_pred ccCCCceE
Confidence 87776553
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.97 E-value=0.0087 Score=55.05 Aligned_cols=227 Identities=11% Similarity=0.043 Sum_probs=130.6
Q ss_pred CcEEEEE-CCCeEEEEECCCCceEEEEecCCCCCCceEEEEE-------cCCCCeEEEEeCCCC------cEEEEECCc-
Q psy14511 209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW-------KPRTTDLAVTNTCTE------YIDLWHEQE- 273 (488)
Q Consensus 209 ~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~~~~------~i~i~d~~~- 273 (488)
++++++. ..+.|++.|+.++....+.............++| +++++.|+++...++ .|.+++...
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 4566665 4478999999998877666542212345889999 999997777733332 255665333
Q ss_pred ceee-----eeeccccccEEEEEe---cCCEEEEeecCCeEEEEECc-------CCCc-----c-----c-eee-ecCCc
Q psy14511 274 ERLI-----QKLRTHMHQVIAMCW---NGNLLSCGTIGGNILHYDVR-------THSD-----Y-----P-TAI-TREGD 326 (488)
Q Consensus 274 ~~~~-----~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~-------~~~~-----~-----~-~~~-~~~~~ 326 (488)
+... ..+.... ....++. ++.++++-..++.|+.+|+. ++.. + . ... .....
T Consensus 232 G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~ 310 (496)
T 3kya_A 232 GTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS 310 (496)
T ss_dssp SCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred CceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence 1211 1221111 1233444 35566667778889999987 4332 0 1 111 12233
Q ss_pred cEEEEEEccCCcEEEEEe-c-CeEEEEECCC--CCCC--c-------------------ccceee-e-eec-------CC
Q psy14511 327 VVCGLKWSPNGRYLASGS-N-NTVKIWDFRQ--LDAK--R-------------------PLGLIV-P-KLK-------RE 372 (488)
Q Consensus 327 ~i~~~~~s~~~~~l~~~~-d-~~i~iwd~~~--~~~~--~-------------------~~~~~~-~-~~~-------~~ 372 (488)
....++|+|+|++|..+. . ..|+.++... .... . .+.... . ... ++
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~ 390 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEE 390 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCC
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCC
Confidence 457899999999766665 3 8898866532 1100 0 011111 1 222 33
Q ss_pred CCEEEEEccCCCCeEEEEeCCCcceeEEEeec------------------------cccEEEEEEcCC-CCEEEEEeCCC
Q psy14511 373 GRELVTSHGKQDCSLKMWEYPRLHLIEELKIH------------------------QERILSAVLSPD-QTCVAAASADE 427 (488)
Q Consensus 373 ~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~------------------------~~~v~~~~~s~~-~~~l~t~~~dg 427 (488)
+.+.++ -..++.|+.++ .++. +.++-+. -.....|++.++ +.++++=....
T Consensus 391 g~lyVa--D~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~ 466 (496)
T 3kya_A 391 YDFYFV--DRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGH 466 (496)
T ss_dssp EEEEEE--EGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTT
T ss_pred CeEEEE--ECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCC
Confidence 444444 45678899988 4564 4444332 023678999997 66666666678
Q ss_pred cEEEEecCCCCcc
Q psy14511 428 TISIWNCFPRDKK 440 (488)
Q Consensus 428 ~v~iw~~~~~~~~ 440 (488)
.|+.++++.....
T Consensus 467 rIrki~~~~~~~~ 479 (496)
T 3kya_A 467 TIRTISMEQEENV 479 (496)
T ss_dssp EEEEEEECCCC--
T ss_pred EEEEEECCCCccc
Confidence 8999988765443
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.90 E-value=0.00017 Score=70.45 Aligned_cols=221 Identities=9% Similarity=-0.050 Sum_probs=116.5
Q ss_pred CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEecccc---CcCCCcccccccccceeEEEE
Q psy14511 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQL---DAKRPQVNNQCHLSAVKAIAW 88 (488)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~---~~~~~~~~~~~h~~~v~~l~~ 88 (488)
.+.|++.++.+.... .++.. ...+..|+|++.+..|..+. .+.|+.+++.+. .....+ +.........|++
T Consensus 385 ~~~I~~id~~~~~~~-~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYT-SLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTTSCCEE-CCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB--CCSCC--CCCEEC
T ss_pred ccceEEEeCCCCcce-eeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE--EeCCCCCcceEEE
Confidence 457788887765422 22222 23466899999777777665 789999998741 111111 1111223567888
Q ss_pred ecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeeccccceeccccccccc
Q psy14511 89 CPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSP 168 (488)
Q Consensus 89 ~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (488)
.+.+..|+.+... .+.|.+.++........+.........++
T Consensus 461 D~~~g~LY~tD~~--~~~I~v~d~dg~~~~~l~~~~~~~P~gia------------------------------------ 502 (699)
T 1n7d_A 461 DWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREQGSKPRAIV------------------------------------ 502 (699)
T ss_dssp CCSSSBCEECCTT--TSCEEEEBSSSCCEEEECCCSSCCCCCEE------------------------------------
T ss_pred EeeCCcEEEEecc--CCeEEEEecCCCceEEEEeCCCCCcceEE------------------------------------
Confidence 7666666666543 78899998764432211111100000000
Q ss_pred eeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE-C-CCeEEEEECCCCceEEEEecCCCCCCceEE
Q psy14511 169 TQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA-L-DTSVYTWNTKTNKTQLLVEYPTYDNAYISC 246 (488)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~ 246 (488)
+++..+.++.+. . .+.|..+++.......+... .-.....
T Consensus 503 -----------------------------------vDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~---~l~~PnG 544 (699)
T 1n7d_A 503 -----------------------------------VDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNG 544 (699)
T ss_dssp -----------------------------------CCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS---SCSSCCC
T ss_pred -----------------------------------EccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC---CCCCccE
Confidence 111112233222 1 25666666543322222111 2234668
Q ss_pred EEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--cccccEEEEEecC-CEEEEeecCCeEEEEECcCC
Q psy14511 247 VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR--THMHQVIAMCWNG-NLLSCGTIGGNILHYDVRTH 314 (488)
Q Consensus 247 ~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~ 314 (488)
|+++|++..|+.+-...+.|..+++........+. ........|++++ .++++....+.|..++..++
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred EEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 99999888887775677889999986532222221 1122334555544 44555556678888887654
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.87 E-value=0.015 Score=53.14 Aligned_cols=62 Identities=8% Similarity=0.019 Sum_probs=42.8
Q ss_pred CcEEEEE-CCCeEEEEECCCCce-EEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECC
Q psy14511 209 HDTLAVA-LDTSVYTWNTKTNKT-QLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQ 272 (488)
Q Consensus 209 ~~~~~~~-~d~~v~iw~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~ 272 (488)
+.++.+. .++.|+.++..++.. ....... .......++++|+++.|+++....+.|+.++..
T Consensus 240 G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~--~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 240 GKIYYTRYHHAMISSYDPATGTLTEEEVMMD--TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CCEEECBTTCSEEEEECTTTCCEEEEEEECS--CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEECCCCEEEEEECCCCeEEEEEeccC--CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 4566555 667899999987765 3333322 223345799999999777775677899998865
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.87 E-value=0.0037 Score=54.17 Aligned_cols=183 Identities=13% Similarity=0.195 Sum_probs=107.7
Q ss_pred CCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe------cCCE--E-EEee-c--CCeEEEEECcCCCccce
Q psy14511 252 RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW------NGNL--L-SCGT-I--GGNILHYDVRTHSDYPT 319 (488)
Q Consensus 252 ~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~------~~~~--l-~~~~-~--dg~i~i~d~~~~~~~~~ 319 (488)
....++.+ ...+.+.+||+ .++.++.+.. +.+..+.. .++. + ++.. . +++|.+|++......+.
T Consensus 39 ~~s~ii~t-~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 39 QNSKLITT-NKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GGCEEEEE-ETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CccEEEEE-cCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 33455555 67889999999 7788888764 34444443 3332 3 3333 3 57899997742222233
Q ss_pred eeec------CC-ccEEEEEE--ccC-Cc-EEEEEe-cCeEEEEECCCCCC----Cccccee-------eeeecCCCCEE
Q psy14511 320 AITR------EG-DVVCGLKW--SPN-GR-YLASGS-NNTVKIWDFRQLDA----KRPLGLI-------VPKLKREGREL 376 (488)
Q Consensus 320 ~~~~------~~-~~i~~~~~--s~~-~~-~l~~~~-d~~i~iwd~~~~~~----~~~~~~~-------~~~~~~~~~~l 376 (488)
.+.. .. ..+..+++ +|. ++ ++.+.. +|.+..|++..... .+.++.+ -+...+....|
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL 194 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence 3311 11 45667777 774 54 344444 49999999843211 1112222 12666777788
Q ss_pred EEEccCCCCeEEEEeCC-----CcceeEEEe-ec-cccEEEEEE--cCCCC-EEEEEe-CCCcEEEEecC-CCCcc
Q psy14511 377 VTSHGKQDCSLKMWEYP-----RLHLIEELK-IH-QERILSAVL--SPDQT-CVAAAS-ADETISIWNCF-PRDKK 440 (488)
Q Consensus 377 ~~~~g~~~~~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~--s~~~~-~l~t~~-~dg~v~iw~~~-~~~~~ 440 (488)
++ +.++..|..++.+ +++.+..+. ++ ...+..|++ .++++ +|++++ .+..+.+||.. +.+.+
T Consensus 195 yv--~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 195 YI--AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV 268 (355)
T ss_dssp EE--EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred EE--ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence 87 5777677777754 344555442 22 236888887 55666 666666 67799999997 44433
No 300
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.75 E-value=0.02 Score=50.83 Aligned_cols=228 Identities=10% Similarity=0.137 Sum_probs=152.3
Q ss_pred eeeCCCcEEEEE----CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeee
Q psy14511 204 LDWGYHDTLAVA----LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQK 279 (488)
Q Consensus 204 ~~~~~~~~~~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~ 279 (488)
+...++++++.- .+..|.+.|+..+......... .-+.-.+|..+.++.- ....+.+||+++...+..
T Consensus 30 ~TmESDkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi~------AdsAIMnP~~~iiALr--ag~~lQiFnle~K~klks 101 (494)
T 1bpo_A 30 LTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPIS------ADSAIMNPASKVIALK--AGKTLQIFNIEMKSKMKA 101 (494)
T ss_dssp EEEEETTEEEEEECCTTCCEEEEEETTSTTSCEEEECC------CSEEEECSSSSCEEEE--ETTEEEEEETTTTEEEEE
T ss_pred eeeecCceEEEEecCCCCCeEEEEECCCCCcceecccc------cceeeeCCCCcEEEEe--cCCeEEEEchHHhhhhcc
Confidence 444456666654 3347888898886654333321 2345678998888887 378999999999888877
Q ss_pred eccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC----CccEEEEEEccCCcEEEEEe----c----C
Q psy14511 280 LRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGS----N----N 346 (488)
Q Consensus 280 ~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~----d----~ 346 (488)
..- ...|.--.| +.+.|+..+ +..|+-|++.....+.+.+..| ...|..-..+++.++++..+ + |
T Consensus 102 ~~~-~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G 179 (494)
T 1bpo_A 102 HTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG 179 (494)
T ss_dssp EEC-SSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEE
T ss_pred eec-CCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccc
Confidence 754 346767777 777777765 5679999998755666666655 35688888899999987543 1 7
Q ss_pred eEEEEECCCCCCCcccceeeeee---cCCC-----CEEEEEc-cCCCCeEEEEeCCCc---ce-----eEEEe----ecc
Q psy14511 347 TVKIWDFRQLDAKRPLGLIVPKL---KREG-----RELVTSH-GKQDCSLKMWEYPRL---HL-----IEELK----IHQ 405 (488)
Q Consensus 347 ~i~iwd~~~~~~~~~~~~~~~~~---~~~~-----~~l~~~~-g~~~~~i~i~d~~~~---~~-----~~~~~----~~~ 405 (488)
.+.+|..+... .+.+..+..+| -.+| ..+..+. ....+.++|.++... .. ...+. ...
T Consensus 180 ~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~ 258 (494)
T 1bpo_A 180 AMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN 258 (494)
T ss_dssp EEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTT
T ss_pred eEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccccc
Confidence 88999988543 24444444443 2222 2333321 122478999998432 11 11111 123
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc
Q psy14511 406 ERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK 442 (488)
Q Consensus 406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~ 442 (488)
+-..++..|+.-..+..-+.-|.|++||++++..+..
T Consensus 259 DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CceeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 4456788888888899999999999999999988743
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.70 E-value=0.013 Score=51.93 Aligned_cols=218 Identities=7% Similarity=-0.052 Sum_probs=116.6
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec---cccccEEEEEecC-----CEEEEeecC------CeEE
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR---THMHQVIAMCWNG-----NLLSCGTIG------GNIL 307 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~-----~~l~~~~~d------g~i~ 307 (488)
.....++|.|+|+.+ ++ ...+.|.+++-...+.+..+. ........++++. ..|+.+... +.|.
T Consensus 31 ~~P~~ia~~pdG~l~-V~-e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGML-IA-ERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEE-EE-ETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEE-EE-eCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 356799999999854 44 467999999822222222221 2234677888843 455555432 5677
Q ss_pred EEECcCCC-----ccceeee---cCCccEEEEEEccCCcEEEEEec--------------CeEEEEECCCCC--------
Q psy14511 308 HYDVRTHS-----DYPTAIT---REGDVVCGLKWSPNGRYLASGSN--------------NTVKIWDFRQLD-------- 357 (488)
Q Consensus 308 i~d~~~~~-----~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~d--------------~~i~iwd~~~~~-------- 357 (488)
.++..... .....+. ........++|.|||.+.++.++ +.|.-++....-
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 88776421 1111122 11112358999999977666533 456556554210
Q ss_pred ----CCccc----cee-eeeecC-CCCEEEEEccCCC------CeEEEEeCCC----------------cceeEEEeecc
Q psy14511 358 ----AKRPL----GLI-VPKLKR-EGRELVTSHGKQD------CSLKMWEYPR----------------LHLIEELKIHQ 405 (488)
Q Consensus 358 ----~~~~~----~~~-~~~~~~-~~~~l~~~~g~~~------~~i~i~d~~~----------------~~~~~~~~~~~ 405 (488)
....+ +.. -.+|+| +++..++-.+... ..|.+..... ..++..+. +.
T Consensus 189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~ 267 (352)
T 2ism_A 189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP-QG 267 (352)
T ss_dssp CTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TC
T ss_pred CCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-CC
Confidence 00110 000 118899 6666665433221 1244432211 01222332 22
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc-------cccccccCCcceEEeecCCCceEE
Q psy14511 406 ERILSAVLSPDQTCVAAASADETISIWNCFPRDK-------KRKARQVGSGSSLEFAILKQPVSL 463 (488)
Q Consensus 406 ~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~-------~~~~~~~~~v~~~~~s~~~~~~~~ 463 (488)
.....++| .+|.++++.-..+.|...+++.... .........+..+++.|||..+..
T Consensus 268 ~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 268 FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVT 331 (352)
T ss_dssp CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEE
T ss_pred CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEE
Confidence 34567888 5777776666677788887765432 122223467889999999865544
No 302
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.69 E-value=0.025 Score=50.27 Aligned_cols=166 Identities=11% Similarity=0.070 Sum_probs=93.8
Q ss_pred ceEEEEEcCCCCeEEEEeC------CCCcEEEEECCcceeeeeeccccccEEEEEecC-----CEEEEeecC---CeEEE
Q psy14511 243 YISCVAWKPRTTDLAVTNT------CTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG-----NLLSCGTIG---GNILH 308 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~d---g~i~i 308 (488)
.|..-..+++.++++..|- -.|.+.+|..+. +..+.+++|......+..+| .++..+... +.+++
T Consensus 152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi 230 (494)
T 1bpo_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 230 (494)
T ss_dssp EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEE
T ss_pred eEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 4555556666666665421 246789999876 56677888888777777744 244444433 78999
Q ss_pred EECcCCCccceeeecCCccEEEEEEccCCc----EEEEEecCeEEEEECCCCCCCcccceeeeeecCCCCEEEEEccCCC
Q psy14511 309 YDVRTHSDYPTAITREGDVVCGLKWSPNGR----YLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQD 384 (488)
Q Consensus 309 ~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~----~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 384 (488)
.++....... .........+-|.|+.. ...-.+ +.-..++. -..-
T Consensus 231 ~Ei~~~~~~~---~~f~kk~vdv~fppe~~~DFPvamqvs--------------------------~kygviyv--iTK~ 279 (494)
T 1bpo_A 231 IEVGTPPTGN---QPFPKKAVDVFFPPEAQNDFPVAMQIS--------------------------EKHDVVFL--ITKY 279 (494)
T ss_dssp EECSCCCTTC---CCCCCEEEECCCCTTSTTCCEEEEEEE--------------------------TTTTEEEE--EETT
T ss_pred EEcCCCccCC---CCccceeeeeeCCcccccCceeEEEec--------------------------ccCCEEEE--EecC
Confidence 8885431000 11111122333333210 111111 11111111 1345
Q ss_pred CeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511 385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK 440 (488)
Q Consensus 385 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~ 440 (488)
|.+++||++++.++..-+-...+|..-+......-++.....|.|.--.+++....
T Consensus 280 G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 280 GYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred ceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence 66777777777777766666667766666666566666668888888777766554
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.69 E-value=0.014 Score=50.55 Aligned_cols=193 Identities=12% Similarity=0.150 Sum_probs=107.1
Q ss_pred eEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEcc----CCcE--EEEec--C---CeEEEEecc--ccCcCCCc
Q psy14511 7 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSP----NGRY--LASGS--N---NTVKIWDFR--QLDAKRPQ 73 (488)
Q Consensus 7 ~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp----~g~~--las~~--d---~~i~vwd~~--~~~~~~~~ 73 (488)
+++.....+-+.+||+ +++.+ +.+.. +.++.+..-| .|+. ||.++ + ++|.++++. ++. ...+
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l-~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKML-HSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEE-EEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred EEEEEcCCCCEEEEcC-CCcEE-EEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 3444456778999999 66645 33433 3466666655 2332 44443 3 789999774 221 1111
Q ss_pred ccc--c-ccc-cceeEEEE--ecC-CC-eEEeeeCCcccceEEEEecC---CC----eeeeeeecCCCcccccccccccc
Q psy14511 74 VNN--Q-CHL-SAVKAIAW--CPW-EP-TLLATGGGICDQTVRLWNSM---NG----KEKCHVKTDSQQANDETISYREQ 138 (488)
Q Consensus 74 ~~~--~-~h~-~~v~~l~~--~~~-~~-~l~~~~~~~~d~~i~vwd~~---~~----~~~~~~~~~~~~~~~~~~~~~~~ 138 (488)
... . +.. ..+..+++ +|. ++ +++++.. ++.+..|++. .+ +.++++....+..
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k---~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E---------- 183 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK---EGEFEQYELKADKNGYISGKKVRAFKMNSQTE---------- 183 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS---SSEEEEEEEEECTTSCEEEEEEEEEECSSCEE----------
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC---CCeEEEEEEEeCCCCcccceEEEEecCCCCcc----------
Confidence 110 0 011 45666777 664 44 4555555 8999999883 22 3333333321100
Q ss_pred ccceeEEEEEeeeeccccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEECCC
Q psy14511 139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDT 218 (488)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 218 (488)
-+.++-..+.++++-.+.
T Consensus 184 --------------------------------------------------------------gcvvDd~~g~Lyv~eEd~ 201 (355)
T 3amr_A 184 --------------------------------------------------------------GMAADDEYGRLYIAEEDE 201 (355)
T ss_dssp --------------------------------------------------------------EEEEETTTTEEEEEETTT
T ss_pred --------------------------------------------------------------eEEEcCCCCeEEEecccc
Confidence 011222346788888887
Q ss_pred eEEEEECC-----CCceEEEEecCCCCCCceEEEEE--cCCCC-eEEEEeCCCCcEEEEECC-cceeeeee
Q psy14511 219 SVYTWNTK-----TNKTQLLVEYPTYDNAYISCVAW--KPRTT-DLAVTNTCTEYIDLWHEQ-EERLIQKL 280 (488)
Q Consensus 219 ~v~iw~~~-----~~~~~~~~~~~~~~~~~i~~~~~--~~~~~-~l~~~~~~~~~i~i~d~~-~~~~~~~~ 280 (488)
.|..++.+ +++.+....... ....+..+++ .++++ +|++++-.+.+..+||.+ +.+.+..+
T Consensus 202 GIw~~da~p~~~~~~~~v~~~~~g~-l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 202 AIWKFSAEPDGGSNGTVIDRADGRH-LTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEEECSTTSCSCCEEEEEBSSSS-BCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred eEEEEeCCcCCCCCceEEEEecCCc-cccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 78888855 233333332222 3346888887 45555 777774567799999986 44444444
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.66 E-value=0.021 Score=48.63 Aligned_cols=239 Identities=12% Similarity=0.066 Sum_probs=140.3
Q ss_pred CccCCceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccc--
Q psy14511 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQC-- 78 (488)
Q Consensus 1 ~~~dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~-- 78 (488)
|.|..+.||.=. ..++.|+|+++.+.+.... - ...|.-=.|- +.+.|+-..+..|+-|+++....+..+....+
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~-~-~e~VvfWkWi-s~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L 149 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-M-TDDVTFWKWI-SLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSL 149 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-C-SSCEEEEEEC-SSSEEEEEESSEEEEEESSTTCCCEEEEECCGGG
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhccee-c-CCccEEEEec-CCCeEEEEcCCcEEEEcccCCCCCceeeecchhc
Confidence 456677787655 7799999999887553321 1 2456655665 45677777889999999975332222222111
Q ss_pred cccceeEEEEecCCCeEEeeeCCc----ccceEEEEecCCCeeeeeeecCCCccccccccccccccceeEEEEEeeeecc
Q psy14511 79 HLSAVKAIAWCPWEPTLLATGGGI----CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID 154 (488)
Q Consensus 79 h~~~v~~l~~~~~~~~l~~~~~~~----~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (488)
-...|..-.-+++.+.++.+|-.. -.|.+.+|..+.+. .+.+.++........ ..+..
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~--~~g~~--------------- 211 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFK--MEGNA--------------- 211 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEEC--CTTCS---------------
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEe--cCCCC---------------
Confidence 134677777889999888777421 24678888876543 333333311100000 00000
Q ss_pred ccceeccccccccceeeecccccccccccCCCceeecCCCccccceeeeeeeCCCcEEEEE----CCCeEEEEECCCC--
Q psy14511 155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA----LDTSVYTWNTKTN-- 228 (488)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~v~iw~~~~~-- 228 (488)
.+..+++-+ ..+++.+.++...
T Consensus 212 ----------------------------------------------------~~~~lf~fa~r~~~g~kLhIiEi~~~~~ 239 (365)
T 2xzh_A 212 ----------------------------------------------------EESTLFCFAVRGQAGGKLHIIEVGTPPT 239 (365)
T ss_dssp ----------------------------------------------------SCEEEEEEEEEETTEEEEEEEECSSCCT
T ss_pred ----------------------------------------------------CCceEEEEEEecCCCcEEEEEEcCCCCC
Confidence 001122211 1246666666332
Q ss_pred -c------eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEE
Q psy14511 229 -K------TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSC 299 (488)
Q Consensus 229 -~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~ 299 (488)
. ...++-.+.......-++..++.-..++.- +.-|.+++||++++.++..-+-...+|..-+. +..-++.
T Consensus 240 ~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyvi-TK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~ 318 (365)
T 2xzh_A 240 GNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI-TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIG 318 (365)
T ss_dssp TCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEE-ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEE
T ss_pred CCCCcccccceeeCCccccCCceEEEEecccCCEEEEE-eCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEE
Confidence 1 111111122235566788888888888888 89999999999999998877766666655555 3345555
Q ss_pred eecCCeEEEEECcCC
Q psy14511 300 GTIGGNILHYDVRTH 314 (488)
Q Consensus 300 ~~~dg~i~i~d~~~~ 314 (488)
....|.|.--.++..
T Consensus 319 Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 319 VNRKGQVLSVCVEEE 333 (365)
T ss_dssp EETTCEEEEEEECTT
T ss_pred EcCCCEEEEEEECcc
Confidence 567777776666553
No 305
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.61 E-value=0.028 Score=48.44 Aligned_cols=233 Identities=8% Similarity=-0.006 Sum_probs=132.3
Q ss_pred CCCcEEEEE--CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-------------CcEEEEEC
Q psy14511 207 GYHDTLAVA--LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-------------EYIDLWHE 271 (488)
Q Consensus 207 ~~~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-------------~~i~i~d~ 271 (488)
.++.++... .++.|+..+.+.....++... .+--+++++.+|+.+...+ ..|+..++
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--------TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--------EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--------ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 344444443 256666666655544333221 1344678999998884333 45777777
Q ss_pred CcceeeeeeccccccEEEEEecCCEEEEee--cC--CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec--
Q psy14511 272 QEERLIQKLRTHMHQVIAMCWNGNLLSCGT--IG--GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-- 345 (488)
Q Consensus 272 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--~d--g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-- 345 (488)
...+... +. ......++.+++.|+-.. .+ ..|+..++.. .....+..+.. .+++|+++.|+-.++
T Consensus 96 dg~~~~~-l~--~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG--s~~~~lt~~~~----~~~~~~g~~iy~t~~g~ 166 (302)
T 3s25_A 96 NGHGSTV-LD--PDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDG--EEKKKIKNHYL----FTCNTSDRYFYYNNPKN 166 (302)
T ss_dssp TSCCCEE-EE--CSCEEEEEEETTEEEEEEESSSSCEEEEEEETTS--CCCEEEESSCC----CCSEEETTEEEEECTTT
T ss_pred CCCcceE-ee--cCCccEEEEeCCEEEEEeecCCCCceEEEEECCC--CCeEEEeCCCc----eEeeEECCEEEEEeCCC
Confidence 6654322 22 223346667888887765 33 4455555543 33455555433 457889999987774
Q ss_pred CeEEEEECCCCCCCccccee-eeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEe
Q psy14511 346 NTVKIWDFRQLDAKRPLGLI-VPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAAS 424 (488)
Q Consensus 346 ~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~ 424 (488)
..|...++............ ...+.|++.+|+.+.......|..-++.... ...+.. ..+ ..|+|++++|..++
T Consensus 167 ~~Iy~~~l~g~~~~~l~~~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 167 GQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQR 241 (302)
T ss_dssp CCEEEEETTTTEEEEEECSCEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEE
T ss_pred ceEEEEECCCCCEEEEeCCCccceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEE
Confidence 78888888765432222111 1146689999987643334577777776544 333432 223 34888999887664
Q ss_pred C--CCcEEEEecCCCCccccccccCCcceEEeecCCCceEEEE
Q psy14511 425 A--DETISIWNCFPRDKKRKARQVGSGSSLEFAILKQPVSLTA 465 (488)
Q Consensus 425 ~--dg~v~iw~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~ 465 (488)
. .+.|..-++....+..+... .+ ...++.+..+....
T Consensus 242 ~~~~~~i~~~~~DG~~r~~l~~~--~~--~~i~i~~d~Iy~td 280 (302)
T 3s25_A 242 GGDNPALCVVKNDGTGFKELAKG--EF--CNINVTSQYVYFTD 280 (302)
T ss_dssp CSSSCEEEEEETTSCCCEEEEES--CE--EEEEECSSEEEEEE
T ss_pred CCCCcEEEEEECCCCccEEeeCC--cc--ceEEEeCCEEEEEE
Confidence 2 46777777776554443322 22 24555566654443
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.60 E-value=0.0047 Score=54.74 Aligned_cols=106 Identities=18% Similarity=0.183 Sum_probs=71.5
Q ss_pred CCceEEEeecCCeEEEEEcccCcccceeeccc----CceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCC-------
Q psy14511 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP------- 72 (488)
Q Consensus 4 dg~~la~g~~dg~i~iwd~~~~~~~~~~~~~h----~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~------- 72 (488)
||+-|+.+- ++.||.-++...... +.+.-. -+.|..+..||+|++||..++..|.|-.+..+.....
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Y-k~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLY-HSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSC-EEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcc-eEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 566666543 677887787754423 333322 2257889999999999999999999998873221110
Q ss_pred c--cc--ccc----cccceeEEEEecCC---CeEEeeeCCcccceEEEEecCC
Q psy14511 73 Q--VN--NQC----HLSAVKAIAWCPWE---PTLLATGGGICDQTVRLWNSMN 114 (488)
Q Consensus 73 ~--~~--~~~----h~~~v~~l~~~~~~---~~l~~~~~~~~d~~i~vwd~~~ 114 (488)
+ .. +.. ...+|..+.|+|-+ ..|++..+ |+.|++||+..
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts---D~~Ir~yDl~~ 158 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE---DDTITMFDILN 158 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET---TSCEEEEETTC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEec---CCEEEEEEccc
Confidence 0 01 110 24679999999954 46777776 99999999976
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.57 E-value=0.013 Score=50.74 Aligned_cols=211 Identities=11% Similarity=0.097 Sum_probs=109.5
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcce-----eeeeeccccccE
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEER-----LIQKLRTHMHQV 287 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~-----~~~~~~~~~~~v 287 (488)
..+..||..+.+......++. .......+.+ ++..++.+ +.+ ..+.+||..+.+ .+..+.......
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~l~v~G-G~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~ 106 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITR-KRRYVASVSL--HDRIYVIG-GYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA 106 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEC-CBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC
T ss_pred eEEEEEcCCCCeEEeCCCCCh-hhccccEEEE--CCEEEEEc-CCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce
Confidence 478999999887665544433 2222223332 45555555 433 468899987754 222222222222
Q ss_pred EEEEecCCEEEEeecC-----CeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEe-c-----CeEEEEECCC
Q psy14511 288 IAMCWNGNLLSCGTIG-----GNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDFRQ 355 (488)
Q Consensus 288 ~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-----~~i~iwd~~~ 355 (488)
.++..++++++.|+.+ ..+.+||+.+.. .....+.........+. -++++++.|+ + ..+.+||+.+
T Consensus 107 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 107 GATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred eEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCC
Confidence 3344478888888754 368889987643 11111111111111222 2677777765 2 5688999876
Q ss_pred CCCCc--ccce---eeeeecCCCCEEEEEccCC-----CCeEEEEeCCCcceeEE--EeeccccEEEEEEcCCCCEEEEE
Q psy14511 356 LDAKR--PLGL---IVPKLKREGRELVTSHGKQ-----DCSLKMWEYPRLHLIEE--LKIHQERILSAVLSPDQTCVAAA 423 (488)
Q Consensus 356 ~~~~~--~~~~---~~~~~~~~~~~l~~~~g~~-----~~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~t~ 423 (488)
.+-.. .+.. ...+...+++.++. |+. ...+.+||+.+.+-... +.........+. -+++.++.|
T Consensus 185 ~~W~~~~~~p~~r~~~~~~~~~~~i~v~--GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~G 260 (301)
T 2vpj_A 185 GHWTNVTPMATKRSGAGVALLNDHIYVV--GGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIA 260 (301)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEC
T ss_pred CcEEeCCCCCcccccceEEEECCEEEEE--eCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEc
Confidence 53211 1110 01133335555555 443 25689999987653322 111111112222 267777777
Q ss_pred eCC-----CcEEEEecCCCC
Q psy14511 424 SAD-----ETISIWNCFPRD 438 (488)
Q Consensus 424 ~~d-----g~v~iw~~~~~~ 438 (488)
+.+ ..+.+||+.+.+
T Consensus 261 G~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 261 GYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CBCSSSBEEEEEEEETTTTE
T ss_pred CcCCCcccccEEEEcCCCCe
Confidence 765 356777776654
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.57 E-value=0.037 Score=49.04 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=46.7
Q ss_pred eEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCccc---ccccccceeEEEEecC---CCeEEeeeCCccc---ceEE
Q psy14511 38 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN---NQCHLSAVKAIAWCPW---EPTLLATGGGICD---QTVR 108 (488)
Q Consensus 38 ~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~---~~~h~~~v~~l~~~~~---~~~l~~~~~~~~d---~~i~ 108 (488)
.-..++|.|+|+++++-.++.|.+++ . ++ ...+.. ..........|+|+|+ +..|+++.....+ ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~-~-g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR-E-GR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE-T-TE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE-C-CC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 45789999999977766589999998 2 22 111111 1112356789999998 5566665541001 5677
Q ss_pred EEecCCC
Q psy14511 109 LWNSMNG 115 (488)
Q Consensus 109 vwd~~~~ 115 (488)
.++...+
T Consensus 109 r~~~~~~ 115 (352)
T 2ism_A 109 RLRHLGE 115 (352)
T ss_dssp EEEECSS
T ss_pred EEEeCCC
Confidence 7776543
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.56 E-value=0.033 Score=48.11 Aligned_cols=93 Identities=14% Similarity=0.105 Sum_probs=54.7
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeeee--eccccccEEEE
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQK--LRTHMHQVIAM 290 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~ 290 (488)
..+..||..+.+.......+. ......++.+ +++.++.+ +.+ ..+.+||+.+.+-... +........++
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~i~v~G-G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 250 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMAT-KRSGAGVALL--NDHIYVVG-GFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT 250 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEEC-CBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred ceEEEEeCCCCcEEeCCCCCc-ccccceEEEE--CCEEEEEe-CCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE
Confidence 568899999988776654443 2222333333 45555555 443 4689999987543322 22222222344
Q ss_pred EecCCEEEEeecC-----CeEEEEECcCC
Q psy14511 291 CWNGNLLSCGTIG-----GNILHYDVRTH 314 (488)
Q Consensus 291 ~~~~~~l~~~~~d-----g~i~i~d~~~~ 314 (488)
..++++++.|+.+ ..+.+||+++.
T Consensus 251 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 251 VLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 4578888888765 35778887764
No 310
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.51 E-value=0.038 Score=47.55 Aligned_cols=65 Identities=9% Similarity=0.092 Sum_probs=40.6
Q ss_pred CcEEEEECC-CeEEEEECCCCceEEEEecC--CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511 209 HDTLAVALD-TSVYTWNTKTNKTQLLVEYP--TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE 274 (488)
Q Consensus 209 ~~~~~~~~d-~~v~iw~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~ 274 (488)
+-+++.+.. +.|...+............. .......+.++++|+++.|++. ...|.+..+|+...
T Consensus 149 naYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~-~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 149 NSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAF-GGPRALTAFDVSKP 216 (334)
T ss_dssp CEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEE-SSSSSEEEEECSSS
T ss_pred CEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEE-cCCCeEEEEcCCCC
Confidence 344445555 66666665544222111111 1023346799999999999999 55999999998853
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.49 E-value=0.024 Score=49.20 Aligned_cols=214 Identities=13% Similarity=0.082 Sum_probs=113.3
Q ss_pred CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC----CcEEEEECCcceeee--eeccccccEEEE
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----EYIDLWHEQEERLIQ--KLRTHMHQVIAM 290 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~~i~i~d~~~~~~~~--~~~~~~~~v~~~ 290 (488)
...+..||..+++....-..+. .......+.+ ++..++.+ +.+ ..+.+||..+.+-.. .+.........+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFE-KRRDAACVFW--DNVVYILG-GSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC 98 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSC-CCBSCEEEEE--TTEEEEEC-CBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE
T ss_pred CceEEEecCCCCCEecCCCCCc-ccceeEEEEE--CCEEEEEe-CCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE
Confidence 4689999999988766555443 2333333333 45555555 533 568889988754322 222222222334
Q ss_pred EecCCEEEEeecC------CeEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEe-c---------CeEEEEEC
Q psy14511 291 CWNGNLLSCGTIG------GNILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N---------NTVKIWDF 353 (488)
Q Consensus 291 ~~~~~~l~~~~~d------g~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d---------~~i~iwd~ 353 (488)
..++++++.|+.+ ..+.+||..+..= ....+.........+. -++++++.|+ + ..+.+||+
T Consensus 99 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCC
Confidence 4578888888765 4688999876430 0111111111111222 2677777765 2 34889998
Q ss_pred CCCCCCc--ccce--e-eeeecCCCCEEEEEccCCC-----CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCCCEEE
Q psy14511 354 RQLDAKR--PLGL--I-VPKLKREGRELVTSHGKQD-----CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQTCVA 421 (488)
Q Consensus 354 ~~~~~~~--~~~~--~-~~~~~~~~~~l~~~~g~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~ 421 (488)
.+..-.. .+.. . ......+++.++. |+.+ ..+.+||+.+.+-.. .+.........+.+ ++++++
T Consensus 177 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~--GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 252 (306)
T 3ii7_A 177 ATETWTELCPMIEARKNHGLVFVKDKIFAV--GGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYV 252 (306)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEE--CCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEE
T ss_pred CCCeEEECCCccchhhcceEEEECCEEEEE--eCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEE
Confidence 7653211 1111 0 1123335555555 4432 468899998764322 22211112223333 777888
Q ss_pred EEeCC-----CcEEEEecCCCCcc
Q psy14511 422 AASAD-----ETISIWNCFPRDKK 440 (488)
Q Consensus 422 t~~~d-----g~v~iw~~~~~~~~ 440 (488)
.|+.+ ..+.+||+.+.+-.
T Consensus 253 ~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 253 LAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp EECBCSSSBCCEEEEEETTTTEEE
T ss_pred EeCcCCCeeeeeEEEEcCCCCeEE
Confidence 88854 45788888776543
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.47 E-value=0.05 Score=48.18 Aligned_cols=75 Identities=11% Similarity=-0.009 Sum_probs=46.4
Q ss_pred ceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccc---cccccceeEEEEecC---CCeEEeeeCC-ccc----c
Q psy14511 37 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNN---QCHLSAVKAIAWCPW---EPTLLATGGG-ICD----Q 105 (488)
Q Consensus 37 ~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~---~~h~~~v~~l~~~~~---~~~l~~~~~~-~~d----~ 105 (488)
..-..|+|.|+|+++++-.++.|+++|. +++ ..+..+ .........|+|+|+ +..|+++... ..+ .
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3467899999999777766899999873 332 222111 112346789999998 5566655430 002 5
Q ss_pred eEEEEecCC
Q psy14511 106 TVRLWNSMN 114 (488)
Q Consensus 106 ~i~vwd~~~ 114 (488)
.|..|+...
T Consensus 106 ~v~r~~~~~ 114 (354)
T 3a9g_A 106 RVIRGRLDG 114 (354)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 666676654
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.45 E-value=0.14 Score=52.94 Aligned_cols=216 Identities=9% Similarity=0.046 Sum_probs=112.5
Q ss_pred eeeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCC------CCeEEEEeCCCCcEEEEECCcc
Q psy14511 201 TSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPR------TTDLAVTNTCTEYIDLWHEQEE 274 (488)
Q Consensus 201 ~~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~~~~~i~i~d~~~~ 274 (488)
+...+..+.+++.+. ++.+.++++..++........ ....|.|+++.|. +++++++...|++++|+++...
T Consensus 516 I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~--l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 516 ISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTE--MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp CCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEE--CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccC--CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 333344445555554 678888888766544433322 4567999999864 3688888334999999999875
Q ss_pred eeeeeeccc-cccEEEEEe---c-CCEEEEeecCCeEEEEECcC--CCcc--ceeeecCCccEEEEEEccCC-cEEEEEe
Q psy14511 275 RLIQKLRTH-MHQVIAMCW---N-GNLLSCGTIGGNILHYDVRT--HSDY--PTAITREGDVVCGLKWSPNG-RYLASGS 344 (488)
Q Consensus 275 ~~~~~~~~~-~~~v~~~~~---~-~~~l~~~~~dg~i~i~d~~~--~~~~--~~~~~~~~~~i~~~~~s~~~-~~l~~~~ 344 (488)
+.+....-. .....++.. + ..+|..|-.||.+.-+.+.. +... .....+ ..++.-..+...+ ..+.+++
T Consensus 593 ~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s 671 (1158)
T 3ei3_A 593 ELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS 671 (1158)
T ss_dssp CEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES
T ss_pred CeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC
Confidence 554432211 123333433 3 35788888999887665542 2110 111222 2334333333333 2334444
Q ss_pred cCeEEEEECCCCCCCcccc----eeeeeecCC--CCEEEEEccCCCCeEEEEeCCCcce--eEEEeeccccEEEEEEcCC
Q psy14511 345 NNTVKIWDFRQLDAKRPLG----LIVPKLKRE--GRELVTSHGKQDCSLKMWEYPRLHL--IEELKIHQERILSAVLSPD 416 (488)
Q Consensus 345 d~~i~iwd~~~~~~~~~~~----~~~~~~~~~--~~~l~~~~g~~~~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~s~~ 416 (488)
+....+|.-+..-...++. .....|+.. ..-++.+ .++.++|..+.+.+. ++++. -...+..++++|+
T Consensus 672 ~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~---~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~ 747 (1158)
T 3ei3_A 672 DRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALA---NNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEV 747 (1158)
T ss_dssp SSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTEEEEE---CSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGG
T ss_pred CCCEEEEEcCCceEEeccChHHhceEeccCcccCCCcEEEE---cCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCC
Confidence 5433344322110000000 012244332 2344442 245588887754332 22232 2456889999998
Q ss_pred CCEEEEEe
Q psy14511 417 QTCVAAAS 424 (488)
Q Consensus 417 ~~~l~t~~ 424 (488)
.+.++.+.
T Consensus 748 ~~~~~v~~ 755 (1158)
T 3ei3_A 748 SQCFGVLS 755 (1158)
T ss_dssp GTEEEEEE
T ss_pred CCEEEEEE
Confidence 88766554
No 314
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.45 E-value=0.052 Score=47.72 Aligned_cols=186 Identities=9% Similarity=0.062 Sum_probs=105.4
Q ss_pred eEEEEEcCCCCeEEEEeC------------CCCcEEEEECCcc--ee-eeeecc-----ccccEEEEEe----cCC--EE
Q psy14511 244 ISCVAWKPRTTDLAVTNT------------CTEYIDLWHEQEE--RL-IQKLRT-----HMHQVIAMCW----NGN--LL 297 (488)
Q Consensus 244 i~~~~~~~~~~~l~~~~~------------~~~~i~i~d~~~~--~~-~~~~~~-----~~~~v~~~~~----~~~--~l 297 (488)
...++..|+| .++++++ .+|.|.++|.++. +. ...+.+ .......+.+ ++. ++
T Consensus 52 ~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 4456677766 4444421 6899999998732 21 112222 2235566665 243 44
Q ss_pred EEeec--CCeEEEEECcCCCccce---eeec-CCccEEEEEEccCCcEEEEEe-----------------c-CeEEEEEC
Q psy14511 298 SCGTI--GGNILHYDVRTHSDYPT---AITR-EGDVVCGLKWSPNGRYLASGS-----------------N-NTVKIWDF 353 (488)
Q Consensus 298 ~~~~~--dg~i~i~d~~~~~~~~~---~~~~-~~~~i~~~~~s~~~~~l~~~~-----------------d-~~i~iwd~ 353 (488)
++-.. +..+.+|++........ .+.+ .-...+.+++.++|++.++.. . +.+..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 44333 56788888765432222 2222 124578999999999887754 1 34444444
Q ss_pred CCCCCCccccee--ee--eecCCCCEEEEEccCCCCeEEEEeCCC-cce--eEEEeeccccEEEEEEcC-CCCEEEEEeC
Q psy14511 354 RQLDAKRPLGLI--VP--KLKREGRELVTSHGKQDCSLKMWEYPR-LHL--IEELKIHQERILSAVLSP-DQTCVAAASA 425 (488)
Q Consensus 354 ~~~~~~~~~~~~--~~--~~~~~~~~l~~~~g~~~~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~l~t~~~ 425 (488)
.+.......+ .+ +|+||++.++++ .+..+.|..|++.. ++. ...+ ...+..-.+++.+ +|++.+++..
T Consensus 211 --~~~~~~~~~l~~pNGia~spDg~~lYva-dt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 211 --NDVRVVAEGFDFANGINISPDGKYVYIA-ELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp --TCCEEEEEEESSEEEEEECTTSSEEEEE-EGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEES
T ss_pred --CeEEEeecCCcccCcceECCCCCEEEEE-eCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecC
Confidence 3221111111 11 999999998886 45678999999853 332 2233 2345667889998 5888877764
Q ss_pred C-CcEEEEec
Q psy14511 426 D-ETISIWNC 434 (488)
Q Consensus 426 d-g~v~iw~~ 434 (488)
+ +.|..|+.
T Consensus 287 ~g~~v~~~~P 296 (355)
T 3sre_A 287 NGMRIFFYDA 296 (355)
T ss_dssp CHHHHHSCCT
T ss_pred CceEEEEECC
Confidence 4 34444443
No 315
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.41 E-value=0.014 Score=50.08 Aligned_cols=152 Identities=10% Similarity=0.092 Sum_probs=101.4
Q ss_pred eeeeeeeCC--CcEEEEE-CCCeEEEEECCCCceEEEEecCC-----CCCCceEEEEE---cCCCCeEEEEeC-------
Q psy14511 200 YTSGLDWGY--HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPT-----YDNAYISCVAW---KPRTTDLAVTNT------- 261 (488)
Q Consensus 200 ~~~~~~~~~--~~~~~~~-~d~~v~iw~~~~~~~~~~~~~~~-----~~~~~i~~~~~---~~~~~~l~~~~~------- 261 (488)
+..+..|+. +.++.+. ..+.|..|+...+..... .+++ .....+..+.+ .|+++.+++. .
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~-~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM-KNAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE-EETTTTCT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEE-cccccccc
Confidence 444566754 7778877 799999999986655544 4432 11234689999 6887777655 3
Q ss_pred ------CCCcEEEEECC---cceeeeeec--cc-----------cccEEEEEe--cCCEEEEeecC-CeEEEEECcCCCc
Q psy14511 262 ------CTEYIDLWHEQ---EERLIQKLR--TH-----------MHQVIAMCW--NGNLLSCGTIG-GNILHYDVRTHSD 316 (488)
Q Consensus 262 ------~~~~i~i~d~~---~~~~~~~~~--~~-----------~~~v~~~~~--~~~~l~~~~~d-g~i~i~d~~~~~~ 316 (488)
.+..|..||+. +++.+.... .. ......++. +|+..++++.. +.|...+....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-- 169 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-- 169 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC--
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC--
Confidence 26779999998 666654432 11 124667777 58888888888 88777776542
Q ss_pred cceeee--c----CCccEEEEEEccCCcEEEEEe-cCeEEEEECCC
Q psy14511 317 YPTAIT--R----EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQ 355 (488)
Q Consensus 317 ~~~~~~--~----~~~~i~~~~~s~~~~~l~~~~-d~~i~iwd~~~ 355 (488)
....+. . .....+.++++|+|+.|++.. .+.+..+|+..
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 122111 1 112256899999999888877 59999999874
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.36 E-value=0.041 Score=47.53 Aligned_cols=212 Identities=13% Similarity=0.138 Sum_probs=109.4
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeee--eeccccccEEEE
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQ--KLRTHMHQVIAM 290 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~ 290 (488)
..+..||..+.+....-.++. ....-..+.+ ++..++.+ +.+ ..+.+||..+.+-.. .+........+.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPS-RRCRAGMVYM--AGLVFAVG-GFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAA 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEES-CBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred CcEEEEcCcCCcEeEcccCCc-ccccceEEEE--CCEEEEEe-CcCCCccccceEEECCCCCceeeCCCCCccccceEEE
Confidence 468889999887666544443 2222223333 45555555 433 358889987754322 222222222344
Q ss_pred EecCCEEEEeecCC-----eEEEEECcCCCc-cceeeecCCccEEEEEEccCCcEEEEEe-c-------CeEEEEECCCC
Q psy14511 291 CWNGNLLSCGTIGG-----NILHYDVRTHSD-YPTAITREGDVVCGLKWSPNGRYLASGS-N-------NTVKIWDFRQL 356 (488)
Q Consensus 291 ~~~~~~l~~~~~dg-----~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-------~~i~iwd~~~~ 356 (488)
..++.+++.|+.++ .+.+||+.+..= ....+.........+. -++++++.|+ + ..+.+||+.+.
T Consensus 106 ~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 106 VLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp EETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred EECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 45788888887664 577888876430 1111111111111222 2667777765 2 34889998765
Q ss_pred CCCc--ccc--ee-eeeecCCCCEEEEEccCCC-----CeEEEEeCCCcceeEE--EeeccccEEEEEEcCCCCEEEEEe
Q psy14511 357 DAKR--PLG--LI-VPKLKREGRELVTSHGKQD-----CSLKMWEYPRLHLIEE--LKIHQERILSAVLSPDQTCVAAAS 424 (488)
Q Consensus 357 ~~~~--~~~--~~-~~~~~~~~~~l~~~~g~~~-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~t~~ 424 (488)
.-.. .+. .. ......+++.++. |+.+ ..+.+||+.+.+-... +......-..+. .+++.++.|+
T Consensus 184 ~W~~~~~~p~~r~~~~~~~~~~~iyv~--GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG 259 (302)
T 2xn4_A 184 EWTYIAEMSTRRSGAGVGVLNNLLYAV--GGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGG 259 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEE--CCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECC
T ss_pred cEEECCCCccccccccEEEECCEEEEE--CCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECC
Confidence 3211 111 11 1133335555555 4432 4689999987643321 111111111222 3677888887
Q ss_pred CCC-----cEEEEecCCCCc
Q psy14511 425 ADE-----TISIWNCFPRDK 439 (488)
Q Consensus 425 ~dg-----~v~iw~~~~~~~ 439 (488)
.++ .+.+||+.+.+-
T Consensus 260 ~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 260 DDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp BCSSSBCCCEEEEETTTTEE
T ss_pred cCCCcccccEEEEcCCCCeE
Confidence 653 488888877653
No 317
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.33 E-value=0.03 Score=57.72 Aligned_cols=229 Identities=10% Similarity=0.110 Sum_probs=146.9
Q ss_pred eeeeeCCCcEEEEE----CCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceee
Q psy14511 202 SGLDWGYHDTLAVA----LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLI 277 (488)
Q Consensus 202 ~~~~~~~~~~~~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~ 277 (488)
..+...++++++.- ....|.+.|+..+....... -..-+.-.+|..+.++.- ...++.+||+.+...+
T Consensus 28 ~~~T~eSDkyicvre~~~~~~~vvIidl~~~~~~~rrp------i~AdsAIMnP~~~iiALr--ag~~lQiFnl~~k~kl 99 (1630)
T 1xi4_A 28 STLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRP------ISADSAIMNPASKVIALK--AGKTLQIFNIEMKSKM 99 (1630)
T ss_pred cceeeecCceEEEEecCCCCceEEEEECCCCCCccccc------ccchhhccCCCcceEEEe--cCCeEEEeehHHhhhh
Confidence 34555566677654 33478888888766432222 223345578888877777 4789999999988777
Q ss_pred eeeccccccEEEEEe-cCCEEEEeecCCeEEEEECcCCCccceeeecC----CccEEEEEEccCCcEEEEEe--------
Q psy14511 278 QKLRTHMHQVIAMCW-NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGS-------- 344 (488)
Q Consensus 278 ~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~-------- 344 (488)
....- ..+|.--.| +.+.|+..+ +..|+.|++.....+.+.+..| ...|..-..+++.++++..+
T Consensus 100 ks~~~-~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v 177 (1630)
T 1xi4_A 100 KAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV 177 (1630)
T ss_pred ccccc-CCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcc
Confidence 76653 446777777 677776665 4569999997655566555555 45677888899999887543
Q ss_pred cCeEEEEECCCCCCCcccceeeeee--------cCCCCEEEEEc-cCCCCeEEEEeCCCc---ceeE------EEe---e
Q psy14511 345 NNTVKIWDFRQLDAKRPLGLIVPKL--------KREGRELVTSH-GKQDCSLKMWEYPRL---HLIE------ELK---I 403 (488)
Q Consensus 345 d~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~-g~~~~~i~i~d~~~~---~~~~------~~~---~ 403 (488)
.|.+.+|..+.... +.+..+..+| .+....+..+. ....+.++|.++... .... .+. .
T Consensus 178 ~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~ 256 (1630)
T 1xi4_A 178 VGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (1630)
T ss_pred cceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc
Confidence 17889998875432 3343333322 12223333321 122468888888432 1111 111 1
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCccc
Q psy14511 404 HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR 441 (488)
Q Consensus 404 ~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~ 441 (488)
..+-..++..|+.-..+..-+.-|.|.++|+.++..+.
T Consensus 257 ~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred ccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 12334567778877788888899999999999998874
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.32 E-value=0.044 Score=47.71 Aligned_cols=216 Identities=10% Similarity=0.055 Sum_probs=109.6
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeC-----C-C----CcEEEEECCcceeee--eeccccc
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNT-----C-T----EYIDLWHEQEERLIQ--KLRTHMH 285 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----~-~----~~i~i~d~~~~~~~~--~~~~~~~ 285 (488)
..+..||..+++... ...+. ........+...++..++.+|. . . ..+..||..+.+-.. .+.....
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE
T ss_pred CceEEECCCCCeEec-CCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh
Confidence 789999999988654 44332 1122333333456777777742 1 1 127788887754322 1211111
Q ss_pred cEEEEEecCCEEEEeecC--------CeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEec-------CeEE
Q psy14511 286 QVIAMCWNGNLLSCGTIG--------GNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGSN-------NTVK 349 (488)
Q Consensus 286 ~v~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d-------~~i~ 349 (488)
.......++.+++.|+.+ ..+.+||..+.. .....+....... +++ .-++++++.|+. ..+.
T Consensus 91 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~ 168 (315)
T 4asc_A 91 LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVL-SHMDLVYVIGGKGSDRKCLNKMC 168 (315)
T ss_dssp SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCTTSCBCCCEE
T ss_pred ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEE-EECCEEEEEeCCCCCCcccceEE
Confidence 122334477888887743 458899987643 1111111111111 122 246677777652 4689
Q ss_pred EEECCCCCCC--ccccee---eeeecCCCCEEEEEccCCC----CeEEEEeCCCcceeEE--EeeccccEEEEEEcCCCC
Q psy14511 350 IWDFRQLDAK--RPLGLI---VPKLKREGRELVTSHGKQD----CSLKMWEYPRLHLIEE--LKIHQERILSAVLSPDQT 418 (488)
Q Consensus 350 iwd~~~~~~~--~~~~~~---~~~~~~~~~~l~~~~g~~~----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~ 418 (488)
+||..+.+-. ..+... ..+...+++.++.. |..+ ..+.+||+.+.+-... +.........+. -+++
T Consensus 169 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~ 245 (315)
T 4asc_A 169 VYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAA-GVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS--LVGT 245 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEE-EECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTE
T ss_pred EEeCCCCeEEECCCCCCchhceEEEEECCEEEEEe-ccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE--ECCE
Confidence 9998765311 111111 11333355555552 3322 2588999987643322 111111112222 2677
Q ss_pred EEEEEeCCC--------------cEEEEecCCCCcc
Q psy14511 419 CVAAASADE--------------TISIWNCFPRDKK 440 (488)
Q Consensus 419 ~l~t~~~dg--------------~v~iw~~~~~~~~ 440 (488)
+++.|+.++ .+.+||+.+.+-.
T Consensus 246 l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 246 LYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred EEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 778877642 3677887766543
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.21 E-value=0.061 Score=46.60 Aligned_cols=212 Identities=9% Similarity=0.045 Sum_probs=108.7
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----C-----CcEEEEECCcceeee--eecccccc
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----T-----EYIDLWHEQEERLIQ--KLRTHMHQ 286 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~-----~~i~i~d~~~~~~~~--~~~~~~~~ 286 (488)
..+.+||..+.+....-..+. .......+.+ ++..++.+ +. + ..+.+||..+.+-.. .+......
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 114 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQV-PRSGLAGCVV--GGLLYAVG-GRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNR 114 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEC-CEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBT
T ss_pred ceEEEEcCCCCeEeECCCCCc-ccccceEEEE--CCEEEEEC-CCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccc
Confidence 478999999888766544443 2222222322 45555555 43 2 468889987754322 22222222
Q ss_pred EEEEEecCCEEEEeecC-----CeEEEEECcCCC-ccceeeecCCccEEEEEEccCCcEEEEEe-c-----CeEEEEECC
Q psy14511 287 VIAMCWNGNLLSCGTIG-----GNILHYDVRTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N-----NTVKIWDFR 354 (488)
Q Consensus 287 v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d-----~~i~iwd~~ 354 (488)
......++++++.|+.+ ..+.+||..+.. .....+.........+.+ ++++++.|+ + ..+.+||+.
T Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 192 (308)
T 1zgk_A 115 IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPE 192 (308)
T ss_dssp CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETT
T ss_pred cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCC
Confidence 23444578888887754 358889987643 111111111111122222 677777765 2 468899987
Q ss_pred CCCCCc--ccce---eeeeecCCCCEEEEEccCCC-----CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCCCEEEE
Q psy14511 355 QLDAKR--PLGL---IVPKLKREGRELVTSHGKQD-----CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQTCVAA 422 (488)
Q Consensus 355 ~~~~~~--~~~~---~~~~~~~~~~~l~~~~g~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~t 422 (488)
+.+-.. .+.. ...+..-+++.++. |+.+ ..+.+||+.+.+-.. .+.........+. -++++++.
T Consensus 193 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~--GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~ 268 (308)
T 1zgk_A 193 RNEWRMITAMNTIRSGAGVCVLHNCIYAA--GGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVL 268 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEETTEEEEE--CCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEE
T ss_pred CCeEeeCCCCCCccccceEEEECCEEEEE--eCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEE
Confidence 653211 1110 01122335555555 4433 568999998764322 1111111112222 26777777
Q ss_pred EeCC-----CcEEEEecCCCCc
Q psy14511 423 ASAD-----ETISIWNCFPRDK 439 (488)
Q Consensus 423 ~~~d-----g~v~iw~~~~~~~ 439 (488)
|+.+ ..+.+||+.+.+-
T Consensus 269 GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 269 GGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp CCBCSSCBCCEEEEEETTTTEE
T ss_pred cCcCCCcccceEEEEcCCCCEE
Confidence 7754 3467777776543
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.13 E-value=0.11 Score=45.94 Aligned_cols=218 Identities=9% Similarity=-0.013 Sum_probs=117.3
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-eeeeec---cccccEEEEEec-----CCEEEEeec----C----C
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER-LIQKLR---THMHQVIAMCWN-----GNLLSCGTI----G----G 304 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~-~~~~~~---~~~~~v~~~~~~-----~~~l~~~~~----d----g 304 (488)
.....++|.|+|+ |+++ ..+|.|++++. .++ .+..+. ........++++ +..|+.+.. + .
T Consensus 29 ~~P~~ia~~pdG~-l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTE-EEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCe-EEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 4578999999997 4455 56799999974 333 222221 123457788884 345555443 2 5
Q ss_pred eEEEEECcCCC------c-cceeeec-CCccEEEEEEccCCcEEEEEec--------------CeEEEEECCCCCCC--c
Q psy14511 305 NILHYDVRTHS------D-YPTAITR-EGDVVCGLKWSPNGRYLASGSN--------------NTVKIWDFRQLDAK--R 360 (488)
Q Consensus 305 ~i~i~d~~~~~------~-~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d--------------~~i~iwd~~~~~~~--~ 360 (488)
.|..|+..... + ....+.. .......++|.|||.+.++.++ +.|.-++... +.. .
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG-RPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC-CCCCCC
Confidence 67777765431 1 1111221 1112457999999987776543 3455555432 100 0
Q ss_pred ---cccee--------eeeecC-CCCEEEEEccCCC-CeEEEEeCCC----------------cceeEEEeeccccEEEE
Q psy14511 361 ---PLGLI--------VPKLKR-EGRELVTSHGKQD-CSLKMWEYPR----------------LHLIEELKIHQERILSA 411 (488)
Q Consensus 361 ---~~~~~--------~~~~~~-~~~~l~~~~g~~~-~~i~i~d~~~----------------~~~~~~~~~~~~~v~~~ 411 (488)
....+ -.+|+| +++..++-.+... ..|.+..... ..++..+.........+
T Consensus 185 pf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 185 PFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp SSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 00111 117888 6666665432221 1233332110 01222331122357788
Q ss_pred EEc-------CCCCEEEEEeCCCcEEEEecCCC-Ccc---ccc-cccCCcceEEeecCCCceEE
Q psy14511 412 VLS-------PDQTCVAAASADETISIWNCFPR-DKK---RKA-RQVGSGSSLEFAILKQPVSL 463 (488)
Q Consensus 412 ~~s-------~~~~~l~t~~~dg~v~iw~~~~~-~~~---~~~-~~~~~v~~~~~s~~~~~~~~ 463 (488)
+|. .+|.++++.-..+.|...++... +.. ... .....+..+++.|||..+..
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~ 328 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIS 328 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEE
Confidence 883 57777777767788888888753 221 111 22457889999999965543
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.13 E-value=0.11 Score=45.05 Aligned_cols=94 Identities=9% Similarity=0.160 Sum_probs=52.8
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCC----cEEEEECCcceeeee--eccccccEEEEE
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE----YIDLWHEQEERLIQK--LRTHMHQVIAMC 291 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----~i~i~d~~~~~~~~~--~~~~~~~v~~~~ 291 (488)
..+.+||..+.+.......+. ......++.+ +++.++.+|..+. .+.+||..+.+-... +.........+.
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 241 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQT-ARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS 241 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred ceEEEEeCCCCeEEECCCCCC-chhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE
Confidence 468999999887766554443 2222233333 5566666633222 588889877543222 222222223444
Q ss_pred ecCCEEEEeecCC--------------eEEEEECcCC
Q psy14511 292 WNGNLLSCGTIGG--------------NILHYDVRTH 314 (488)
Q Consensus 292 ~~~~~l~~~~~dg--------------~i~i~d~~~~ 314 (488)
.++++++.|+.++ .+.+||+.+.
T Consensus 242 ~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 242 LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred ECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 5788888887642 3667777653
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.09 E-value=0.12 Score=44.67 Aligned_cols=94 Identities=13% Similarity=0.074 Sum_probs=55.3
Q ss_pred CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceee--eeeccccccEEE
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLI--QKLRTHMHQVIA 289 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~--~~~~~~~~~v~~ 289 (488)
-..+.+||..+.+....-..+. .......+.+ +++.++.+ +.+ ..+.+||+.+.+-. ..+........+
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~i~v~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIE-ARKNHGLVFV--KDKIFAVG-GQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEEC-CEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred cceEEEeCCCCCeEEECCCccc-hhhcceEEEE--CCEEEEEe-CCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 4568899999988766655443 2222233333 45555555 432 46889998875432 222222222344
Q ss_pred EEecCCEEEEeecC-----CeEEEEECcCC
Q psy14511 290 MCWNGNLLSCGTIG-----GNILHYDVRTH 314 (488)
Q Consensus 290 ~~~~~~~l~~~~~d-----g~i~i~d~~~~ 314 (488)
+..++++++.|+.+ ..+.+||+.+.
T Consensus 244 ~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 244 AAVGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred EEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 44588888888854 46888888764
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.09 E-value=0.12 Score=44.72 Aligned_cols=93 Identities=11% Similarity=0.121 Sum_probs=53.4
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeee--eeccccccEEEE
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQ--KLRTHMHQVIAM 290 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~ 290 (488)
..+..||+.+.+.......+. ......++.+ +++.++.+ +.+ ..+.+||+.+.+-.. .+.........+
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 259 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNT-IRSGAGVCVL--HNCIYAAG-GYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGIT 259 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TTEEEEEC-CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred ceEEEEeCCCCeEeeCCCCCC-ccccceEEEE--CCEEEEEe-CCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEE
Confidence 568899998887765544433 2223333333 45555555 443 568999988754332 222112222334
Q ss_pred EecCCEEEEeecC-----CeEEEEECcCC
Q psy14511 291 CWNGNLLSCGTIG-----GNILHYDVRTH 314 (488)
Q Consensus 291 ~~~~~~l~~~~~d-----g~i~i~d~~~~ 314 (488)
..++++++.|+.+ ..+.+||+.+.
T Consensus 260 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 260 VHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 4478888888754 35677777653
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.93 E-value=0.17 Score=43.66 Aligned_cols=93 Identities=17% Similarity=0.178 Sum_probs=54.5
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceeee--eeccccccEEEE
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLIQ--KLRTHMHQVIAM 290 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~ 290 (488)
..+..||..+.+.......+. ......++.+ +++.++.+ +.+ ..+.+||..+.+-.. .+.........+
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 248 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMST-RRSGAGVGVL--NNLLYAVG-GHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC 248 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEEC-CBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred cEEEEEeCCCCcEEECCCCcc-ccccccEEEE--CCEEEEEC-CCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE
Confidence 468899999888776655443 2222333333 45555555 443 468899988754322 222111222334
Q ss_pred EecCCEEEEeecCC-----eEEEEECcCC
Q psy14511 291 CWNGNLLSCGTIGG-----NILHYDVRTH 314 (488)
Q Consensus 291 ~~~~~~l~~~~~dg-----~i~i~d~~~~ 314 (488)
..++++++.|+.++ .+.+||+.+.
T Consensus 249 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 249 AVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 45788888887654 4788888764
No 325
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.88 E-value=0.14 Score=45.55 Aligned_cols=143 Identities=10% Similarity=0.041 Sum_probs=92.8
Q ss_pred CCcEEEEECCCeEEEEECCCCceEEEEecCC-CCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcce-----------
Q psy14511 208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYPT-YDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER----------- 275 (488)
Q Consensus 208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~----------- 275 (488)
++.-+....++.||.-++.....-+.+..+. ..-..+..+..+|+|++|+.. .+..|.+..+..+.
T Consensus 31 n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~--g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF--NDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE--CSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe--cCCeEEEEEecCccccCcccccccc
Confidence 3445555566888888877544444444431 012357789999999999998 45678888876321
Q ss_pred -eeeeecc------ccccEEEEEe-----cCCEEEEeecCCeEEEEECcCCCccceeee---------cCCccEEEEEEc
Q psy14511 276 -LIQKLRT------HMHQVIAMCW-----NGNLLSCGTIGGNILHYDVRTHSDYPTAIT---------REGDVVCGLKWS 334 (488)
Q Consensus 276 -~~~~~~~------~~~~v~~~~~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~~~i~~~~~s 334 (488)
..+.+.- ...+|..+.| ++..|++-..|+.|++||+.........+. .....|.+++|.
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg 188 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFS 188 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEEC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEc
Confidence 1112221 2467999999 478999999999999999986322111222 122568899999
Q ss_pred cCCcEEEEEe--c-CeEEEEE
Q psy14511 335 PNGRYLASGS--N-NTVKIWD 352 (488)
Q Consensus 335 ~~~~~l~~~~--d-~~i~iwd 352 (488)
+++-.|...+ + |.|+-.-
T Consensus 189 ~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 189 KDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp TTSSCEEEEECTTSCEEEEES
T ss_pred CCCcEEEEEecCCCCCEEEEC
Confidence 9886666544 4 7765443
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.84 E-value=0.25 Score=51.21 Aligned_cols=88 Identities=14% Similarity=0.193 Sum_probs=52.6
Q ss_pred CCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccccCcCCCcccccccccceeEEEEecCCC
Q psy14511 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP 93 (488)
Q Consensus 14 dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 93 (488)
..+|.|.|+..+..+.+.--.- -+.-.+|..+.||--...++.|+|+++.. .+.... ...+|.-=.|-.+.
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A----dsAIMnP~~~iiALrag~~lQiFnl~~k~---klks~~-~~e~VvfWkWis~~- 117 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKAGKTLQIFNIEMKS---KMKAHT-MTDDVTFWKWISLN- 117 (1630)
T ss_pred CceEEEEECCCCCCcccccccc----hhhccCCCcceEEEecCCeEEEeehHHhh---hhcccc-cCCCceEEEecCCC-
Confidence 3478888888766442211111 12346787888877778899999998733 222221 23466666776554
Q ss_pred eEEeeeCCcccceEEEEecCC
Q psy14511 94 TLLATGGGICDQTVRLWNSMN 114 (488)
Q Consensus 94 ~l~~~~~~~~d~~i~vwd~~~ 114 (488)
.|..++ +..|.-|++..
T Consensus 118 ~l~lVT----~~aVyHW~~~~ 134 (1630)
T 1xi4_A 118 TVALVT----DNAVYHWSMEG 134 (1630)
T ss_pred eeEEEc----CCeEEEeccCC
Confidence 333333 66899998854
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.76 E-value=0.27 Score=43.56 Aligned_cols=226 Identities=12% Similarity=0.085 Sum_probs=109.9
Q ss_pred CCcEEEEE--CCCeEEEEECCC--CceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----------CCcEEEEECCc
Q psy14511 208 YHDTLAVA--LDTSVYTWNTKT--NKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----------TEYIDLWHEQE 273 (488)
Q Consensus 208 ~~~~~~~~--~d~~v~iw~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----------~~~i~i~d~~~ 273 (488)
++.+++.+ ....+..||..+ .+......++........++.+ +++.++.+ +. -..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~G-G~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFG-GIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEEC-CEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEc-CCCCCCCccceeeccEEEEeCCC
Confidence 34554444 456799999874 5555444443112222333333 45555555 44 24688899887
Q ss_pred ceeee--eec-cccccEEEEEecCCEEEEeecC---------------------------------------CeEEEEEC
Q psy14511 274 ERLIQ--KLR-THMHQVIAMCWNGNLLSCGTIG---------------------------------------GNILHYDV 311 (488)
Q Consensus 274 ~~~~~--~~~-~~~~~v~~~~~~~~~l~~~~~d---------------------------------------g~i~i~d~ 311 (488)
.+-.. .+. .......++..++++++.|+.+ ..+.+||.
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred CcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 54322 222 1112233344688888888754 57889998
Q ss_pred cCCC-ccceeeecCCccEEEEEEccCCcEEEEEe-c------CeEEEEEC--CCCC--CCcccc----ee-eeeecCCCC
Q psy14511 312 RTHS-DYPTAITREGDVVCGLKWSPNGRYLASGS-N------NTVKIWDF--RQLD--AKRPLG----LI-VPKLKREGR 374 (488)
Q Consensus 312 ~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-d------~~i~iwd~--~~~~--~~~~~~----~~-~~~~~~~~~ 374 (488)
.+.. .....+......-.+++. -++++++.|+ + ..+.+||+ .+.. ....+. .. ..+...+++
T Consensus 176 ~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 254 (357)
T 2uvk_A 176 STQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDS 254 (357)
T ss_dssp TTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTE
T ss_pred CCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCE
Confidence 7643 111111111111012222 2666777665 2 35777876 3221 111111 11 113344555
Q ss_pred EEEEEccCCC----------------------CeEEEEeCCCcc--eeEEEeeccccEEEEEEcCCCCEEEEEeCCC---
Q psy14511 375 ELVTSHGKQD----------------------CSLKMWEYPRLH--LIEELKIHQERILSAVLSPDQTCVAAASADE--- 427 (488)
Q Consensus 375 ~l~~~~g~~~----------------------~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg--- 427 (488)
.++. |+.+ ..+.+||+.+.+ .+..+......-.+ ...+++.++.|+.++
T Consensus 255 iyv~--GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~ 330 (357)
T 2uvk_A 255 LIFA--GGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGK 330 (357)
T ss_dssp EEEE--CCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGC
T ss_pred EEEE--cCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCC
Confidence 5555 4321 257889987654 33333222221122 234788888888653
Q ss_pred ---cEEEEecCCCCccc
Q psy14511 428 ---TISIWNCFPRDKKR 441 (488)
Q Consensus 428 ---~v~iw~~~~~~~~~ 441 (488)
.|.+.++++++...
T Consensus 331 ~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 331 AVTDSVLITVKDNKVTV 347 (357)
T ss_dssp EEEEEEEEEC-CCSCEE
T ss_pred EeeeEEEEEEcCcEeEe
Confidence 35566887777653
No 328
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.71 E-value=0.25 Score=42.49 Aligned_cols=123 Identities=7% Similarity=0.086 Sum_probs=70.5
Q ss_pred CCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccccccEEEEEecCCE
Q psy14511 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNL 296 (488)
Q Consensus 217 d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 296 (488)
...|+..++.......+.. +. + .+++|+++.|+.+......|...++..+.....+.+. .. ..+.++++.
T Consensus 128 ~~~Iy~~~~dGs~~~~lt~----~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~-~~-~~~~P~g~~ 197 (302)
T 3s25_A 128 ATSLYRIRIDGEEKKKIKN----HY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN-CY-KPVVLDDTN 197 (302)
T ss_dssp CEEEEEEETTSCCCEEEES----SC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC-EE-EEEEEETTE
T ss_pred CceEEEEECCCCCeEEEeC----CC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC-cc-ceeeecCCE
Confidence 4566666776544443332 21 1 4567889999988333677888888765544333321 11 223347777
Q ss_pred EEEeecC--CeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEec---CeEEEEECCC
Q psy14511 297 LSCGTIG--GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN---NTVKIWDFRQ 355 (488)
Q Consensus 297 l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d---~~i~iwd~~~ 355 (488)
|+-...+ ..|..-++... ....+... .+ ..|+|++++|..+.+ +.|..-++..
T Consensus 198 iy~t~~~~~~~I~~~~ldG~--~~~~Lt~~--~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNP--NPVVLTEA--NI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSC--CCEECSCS--CE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred EEEEEcCCCcEEEEEECCCC--CeEEEeCC--Cc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 7766544 35666666543 23334322 23 348889999887653 5666666654
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.68 E-value=0.28 Score=42.63 Aligned_cols=94 Identities=11% Similarity=0.203 Sum_probs=52.0
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCC----CcEEEEECCcceeee--eeccccccEEEEE
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT----EYIDLWHEQEERLIQ--KLRTHMHQVIAMC 291 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~ 291 (488)
..+.+||..+.+.......+. ......++.+ +++.++.+|..+ ..+.+||+.+.+-.. .+.........+.
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 251 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKT-PRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS 251 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSS-CCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE
T ss_pred ceEEEEcCCCCEEEECCCCCC-CcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE
Confidence 468999999988766654443 2222233333 455666663222 357788887653222 2222222223444
Q ss_pred ecCCEEEEeecC--------------CeEEEEECcCC
Q psy14511 292 WNGNLLSCGTIG--------------GNILHYDVRTH 314 (488)
Q Consensus 292 ~~~~~l~~~~~d--------------g~i~i~d~~~~ 314 (488)
.++++++.|+.+ ..+.+||+.+.
T Consensus 252 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 252 LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 578888887754 34667776653
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.68 E-value=0.28 Score=42.62 Aligned_cols=213 Identities=12% Similarity=0.066 Sum_probs=105.6
Q ss_pred CeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCC----CC-------cEEEEECCcceeeee--ecccc
Q psy14511 218 TSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTC----TE-------YIDLWHEQEERLIQK--LRTHM 284 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~-------~i~i~d~~~~~~~~~--~~~~~ 284 (488)
..+..||..+++... ...+. ........+...++..++.| +. ++ .+..||..+.+-... +....
T Consensus 24 ~~~~~yd~~~~~W~~-~~~~~-~~~r~~~~~~~~~~~lyv~G-G~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 100 (318)
T 2woz_A 24 TAAVAYDPMENECYL-TALAE-QIPRNHSSIVTQQNQVYVVG-GLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSAR 100 (318)
T ss_dssp SEEEEEETTTTEEEE-EEECT-TSCSSEEEEECSSSCEEEEE-SSCC-------CCCBEEEEEETTTTEEEECSCBSSCB
T ss_pred cceEEECCCCCceec-ccCCc-cCCccceEEEEECCEEEEEC-CcccCccccCCCccccEEEEeCCCCcEEECCCCCccc
Confidence 358999999988655 33322 11222233334566777777 42 11 277888876543221 22111
Q ss_pred ccEEEEEecCCEEEEeecC-------CeEEEEECcCCCccceeeecCCcc-E-EEEEEccCCcEEEEEe-c------CeE
Q psy14511 285 HQVIAMCWNGNLLSCGTIG-------GNILHYDVRTHSDYPTAITREGDV-V-CGLKWSPNGRYLASGS-N------NTV 348 (488)
Q Consensus 285 ~~v~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~-i-~~~~~s~~~~~l~~~~-d------~~i 348 (488)
........++++++.|+.+ ..+.+||..+.. -..+.....+ . .+++. .++++++.|+ + ..+
T Consensus 101 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 177 (318)
T 2woz_A 101 CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRV 177 (318)
T ss_dssp CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCE
T ss_pred cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCC--EeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceE
Confidence 2223344478888888764 357888887643 1111111110 0 11222 4677777765 1 358
Q ss_pred EEEECCCCCCCc--ccce--e-eeeecCCCCEEEEEccCCC----CeEEEEeCCCcceeE--EEeeccccEEEEEEcCCC
Q psy14511 349 KIWDFRQLDAKR--PLGL--I-VPKLKREGRELVTSHGKQD----CSLKMWEYPRLHLIE--ELKIHQERILSAVLSPDQ 417 (488)
Q Consensus 349 ~iwd~~~~~~~~--~~~~--~-~~~~~~~~~~l~~~~g~~~----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~s~~~ 417 (488)
.+||+.+.+-.. .+.. . ..+..-+++.++.. |..+ ..+.+||+.+.+-.. .+.........+. .++
T Consensus 178 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~ 254 (318)
T 2woz_A 178 FIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAG-GVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAG 254 (318)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEE-EEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETT
T ss_pred EEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEc-CcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECC
Confidence 999988653111 1110 0 11233355555552 3222 357789987754322 1211111112222 366
Q ss_pred CEEEEEeCC--------------CcEEEEecCCCCc
Q psy14511 418 TCVAAASAD--------------ETISIWNCFPRDK 439 (488)
Q Consensus 418 ~~l~t~~~d--------------g~v~iw~~~~~~~ 439 (488)
++++.|+.+ ..+.+||+.+.+-
T Consensus 255 ~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 255 SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred EEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 777777654 3467777766543
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.63 E-value=0.31 Score=42.60 Aligned_cols=77 Identities=17% Similarity=0.066 Sum_probs=46.9
Q ss_pred ceEEEEEEccCCcEEEEec-CCeEEEEeccccCcCCCcc----cccccccceeEEEEecC---CCeEEeeeCCcccceEE
Q psy14511 37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQV----NNQCHLSAVKAIAWCPW---EPTLLATGGGICDQTVR 108 (488)
Q Consensus 37 ~~V~~l~~sp~g~~las~~-d~~i~vwd~~~~~~~~~~~----~~~~h~~~v~~l~~~~~---~~~l~~~~~~~~d~~i~ 108 (488)
..-..|+|.|||+++++-. .|.|++++..+++.. .+. ...........|+|+|+ +..|+++-+...++.|.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3468999999999998887 899999986543321 111 11223457889999995 33454431100145555
Q ss_pred EEecCC
Q psy14511 109 LWNSMN 114 (488)
Q Consensus 109 vwd~~~ 114 (488)
-|.+..
T Consensus 111 R~~~~~ 116 (347)
T 3das_A 111 RMLYDE 116 (347)
T ss_dssp EEEBCT
T ss_pred EEEeCC
Confidence 555543
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.41 E-value=0.46 Score=42.00 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=27.9
Q ss_pred cEEEEECCcce--eeeeeccccccEEEEEecCCEEEEeecCC------eEEEEECcCCC
Q psy14511 265 YIDLWHEQEER--LIQKLRTHMHQVIAMCWNGNLLSCGTIGG------NILHYDVRTHS 315 (488)
Q Consensus 265 ~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~l~~~~~dg------~i~i~d~~~~~ 315 (488)
.+.+||+.+.+ .+..+......-.++..++++++.|+.++ .+.++++++++
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 57788887643 23233222222234556888888888653 35566777654
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.22 Score=43.30 Aligned_cols=184 Identities=7% Similarity=-0.051 Sum_probs=97.9
Q ss_pred CcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEE--cCCCCeEEEEe-CCCCcEEEEECCcceeeeeecc---
Q psy14511 209 HDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAW--KPRTTDLAVTN-TCTEYIDLWHEQEERLIQKLRT--- 282 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~-~~~~~i~i~d~~~~~~~~~~~~--- 282 (488)
+.+++++.||.|.-+|..+|+..-.++.. ...++....- .+.+..+++.. +.||.|..++..++.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 56888899999999999999887766543 1112211110 01122444442 4799999999888755443321
Q ss_pred -ccccEEE---EEe-------cCCEEEEeecCCeEEEEECcCCCccceeeecCC-cc-----EEEEEEc-----cCCcEE
Q psy14511 283 -HMHQVIA---MCW-------NGNLLSCGTIGGNILHYDVRTHSDYPTAITREG-DV-----VCGLKWS-----PNGRYL 340 (488)
Q Consensus 283 -~~~~v~~---~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~-----i~~~~~s-----~~~~~l 340 (488)
...++.. ... .+..+++|+.+|.+...|+++++.....-.+.. .. ..+.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1122221 001 467889999999999999998763322211110 10 0011110 113445
Q ss_pred EEEe-cCeEEEEECCCCCCCcccc--eee-----------eeecCCCCEEEEEccCCCCeEEEEeCCCcceeE
Q psy14511 341 ASGS-NNTVKIWDFRQLDAKRPLG--LIV-----------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIE 399 (488)
Q Consensus 341 ~~~~-d~~i~iwd~~~~~~~~~~~--~~~-----------~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~ 399 (488)
..+. +..+.+.+ ++++ .-... ... ...+.|+..++ +..||.|.-+|..+|+.+.
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~---~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA---PFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE---EETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE---ECCCCEEEEEECCCCcEEE
Confidence 5555 46666655 3332 11110 000 01223466644 3678888888888887664
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.13 E-value=1 Score=44.04 Aligned_cols=178 Identities=14% Similarity=0.125 Sum_probs=94.8
Q ss_pred CeEEEEECCCCceEEEE-e-----cCCCCCCceEEEEEcCCCCeEEEEeCCC-----CcEEEEECCcceee--eeecccc
Q psy14511 218 TSVYTWNTKTNKTQLLV-E-----YPTYDNAYISCVAWKPRTTDLAVTNTCT-----EYIDLWHEQEERLI--QKLRTHM 284 (488)
Q Consensus 218 ~~v~iw~~~~~~~~~~~-~-----~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~~i~i~d~~~~~~~--~~~~~~~ 284 (488)
..+.+||..+++..... . .+. ....-..+.+..+++.++.||... ..+.+||..+.+-. ..+....
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~-~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPV-ARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCC-CCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCc-cccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 46889999988876655 3 221 222233333332666666663221 35788998874322 2222222
Q ss_pred ccEEEEEe-cCCEEEEeecCC--eEEEEECcCCCc-ccee---eecCCccEEEEEEccC-CcEEEEEec--------CeE
Q psy14511 285 HQVIAMCW-NGNLLSCGTIGG--NILHYDVRTHSD-YPTA---ITREGDVVCGLKWSPN-GRYLASGSN--------NTV 348 (488)
Q Consensus 285 ~~v~~~~~-~~~~l~~~~~dg--~i~i~d~~~~~~-~~~~---~~~~~~~i~~~~~s~~-~~~l~~~~d--------~~i 348 (488)
..-.+..+ ++++++.|+.++ .+.+||..+..= .... ..........+.+..+ +++++.|+. +.+
T Consensus 491 ~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v 570 (695)
T 2zwa_A 491 FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA 570 (695)
T ss_dssp BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE
T ss_pred ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE
Confidence 22344444 788888888765 689999877430 0000 1111111223555555 667777652 358
Q ss_pred EEEECCCCCC-----Cccc------cee-eeeecCC-CCEEEEEccCC--------CCeEEEEeCCCccee
Q psy14511 349 KIWDFRQLDA-----KRPL------GLI-VPKLKRE-GRELVTSHGKQ--------DCSLKMWEYPRLHLI 398 (488)
Q Consensus 349 ~iwd~~~~~~-----~~~~------~~~-~~~~~~~-~~~l~~~~g~~--------~~~i~i~d~~~~~~~ 398 (488)
.+||+.+..- -..+ ... ..+..-+ ++.++. |+. ...+.+||+.+.+-.
T Consensus 571 ~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~--GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 571 IIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIV--GGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEE--CCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEE--CCccCCCCCCCCCeEEEEECCCCeEE
Confidence 8999887651 0011 111 1122233 555555 432 356999999876543
No 335
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.89 E-value=0.85 Score=40.25 Aligned_cols=61 Identities=10% Similarity=0.156 Sum_probs=38.6
Q ss_pred eEEEEEEccCCc-EEEEecCCeEEEEeccccCcCCCcccc----cccccceeEEEEecC---CCeEEeee
Q psy14511 38 VVCGLKWSPNGR-YLASGSNNTVKIWDFRQLDAKRPQVNN----QCHLSAVKAIAWCPW---EPTLLATG 99 (488)
Q Consensus 38 ~V~~l~~sp~g~-~las~~d~~i~vwd~~~~~~~~~~~~~----~~h~~~v~~l~~~~~---~~~l~~~~ 99 (488)
.-..|+|.|+|+ ++++-..+.|++++... .....+..+ .........|+|+|+ +.+|+++.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 357899999999 66665589999998542 211112111 112346789999996 45565554
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.73 E-value=1.3 Score=41.11 Aligned_cols=94 Identities=18% Similarity=0.256 Sum_probs=62.3
Q ss_pred EEEEEEccCCcEEEEEe--cCeEEEEECCCCCC-----------------CcccceeeeeecCCCCEEEEEccCCCCeEE
Q psy14511 328 VCGLKWSPNGRYLASGS--NNTVKIWDFRQLDA-----------------KRPLGLIVPKLKREGRELVTSHGKQDCSLK 388 (488)
Q Consensus 328 i~~~~~s~~~~~l~~~~--d~~i~iwd~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~g~~~~~i~ 388 (488)
...+.++|||+++++++ +.++.++|+++... ..-+..+..+|.++| ..+++ -.-|.+|.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTt-lfidSqvv 402 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTT-LFIDSQVV 402 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEE-ETTTTEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEee-eeecceEE
Confidence 45688999999999998 49999999985211 011122234999999 33332 57899999
Q ss_pred EEeCCCc----------ceeEEEeeccccEEEEEE------cCCCCEEEEEe
Q psy14511 389 MWEYPRL----------HLIEELKIHQERILSAVL------SPDQTCVAAAS 424 (488)
Q Consensus 389 i~d~~~~----------~~~~~~~~~~~~v~~~~~------s~~~~~l~t~~ 424 (488)
.|++... ..+..+.-|-.+ -.+.- .|||++|++..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence 9999653 455566555432 22322 46888888864
No 337
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.53 E-value=1.1 Score=39.22 Aligned_cols=107 Identities=8% Similarity=0.122 Sum_probs=60.7
Q ss_pred CCceEEEEEcCCCCeEEEEeC-----------------CCCcEEEEECCcceeeeeeccccccEEEEEe--cCCEEEEe-
Q psy14511 241 NAYISCVAWKPRTTDLAVTNT-----------------CTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCG- 300 (488)
Q Consensus 241 ~~~i~~~~~~~~~~~l~~~~~-----------------~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~- 300 (488)
-...+.+.+.++|+..++. . ..|.|..+|.. + +..+...-...+.++| |++.++.+
T Consensus 164 ~~~pND~~v~~~G~fyvt~-~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 164 LPSVNDIVAVGPEHFYATN-DHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp CSSEEEEEEEETTEEEEEE-SCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred CCCCceEEEeCCCCEEecC-CcEeCCcccccchhhccCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEe
Confidence 3456777788877655544 2 12445555442 2 2222222234466777 67666655
Q ss_pred ecCCeEEEEECcCCCcc--ceeeecCCccEEEEEEcc-CCcEEEEEe-c-CeEEEEE
Q psy14511 301 TIGGNILHYDVRTHSDY--PTAITREGDVVCGLKWSP-NGRYLASGS-N-NTVKIWD 352 (488)
Q Consensus 301 ~~dg~i~i~d~~~~~~~--~~~~~~~~~~i~~~~~s~-~~~~l~~~~-d-~~i~iwd 352 (488)
+..+.|+.|++...... ...+ ......-.+++.+ +|++.+++. + +.|..|+
T Consensus 240 t~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 240 LLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCC
T ss_pred CCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEEC
Confidence 45789999998743221 1223 2245567889998 598877665 4 4444444
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.06 E-value=3 Score=41.31 Aligned_cols=209 Identities=13% Similarity=0.097 Sum_probs=115.7
Q ss_pred cEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec-------c
Q psy14511 210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-------T 282 (488)
Q Consensus 210 ~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-------~ 282 (488)
.+.+++. +-+..++..+++......+ ....|.++...++|...+.+ . +-+.+++..+.+...... -
T Consensus 204 ~lWigt~-~Gl~~~~~~~~~~~~~~~l---~~~~i~~i~~d~~g~lWigT--~-~Gl~~~~~~~~~~~~~~~~~~~~~~l 276 (758)
T 3ott_A 204 CVWIGTE-GYLFQYFPSTGQIKQTEAF---HNNSIKSLALDGNGDLLAGT--D-NGLYVYHNDTTPLQHIIHDSRNIQSL 276 (758)
T ss_dssp EEEEEEE-EEEEEEETTTTEEEEEEEE---EEEEEEEEEECTTCCEEEEE--T-TEEEEECCTTSCCEEECCCTTCTTSC
T ss_pred EEEEEEC-CCCeEEcCCCCeEEeccCC---CCCeEEEEEEcCCCCEEEEe--C-CceeEEecCCCcEEEEEcCCCCcCcC
Confidence 3666664 5688899887765443332 33468888888887655544 3 457888876643322111 1
Q ss_pred ccccEEEEEec-CCEEEEeecCCeEEEEECcCCCccceeee-------cCCccEEEEEEccCCcEEEEEecCeEEEEECC
Q psy14511 283 HMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSDYPTAIT-------REGDVVCGLKWSPNGRYLASGSNNTVKIWDFR 354 (488)
Q Consensus 283 ~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~ 354 (488)
....|.++..| ...|..|+..| +.++.... ...... .....|.++.-.++|.+.+.. .+-+..++..
T Consensus 277 ~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~~---~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt-~~Gl~~~~~~ 351 (758)
T 3ott_A 277 TNNIIWNIFADQEHNIWLGTDYG-ISLSRYNS---ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG-ANGLIRFTDP 351 (758)
T ss_dssp SCSCEEEEEECTTCCEEEEESSS-EEEECCCC----CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE-TTEEEEESCT
T ss_pred CcCeEEEEEEcCCCCEEEEeCCc-ccccccCC---ceeEEecccCCCCCCCceEEEEEEcCCCCEEEee-CCcceeeccc
Confidence 23458888774 34566666666 54443321 111111 123458888888888776654 4446666654
Q ss_pred CCCCCc-----------ccc-eeeeee--cCCCCEEEEEccCCCCeEEEEeCCCcceeEEEe-e-----ccccEEEEEEc
Q psy14511 355 QLDAKR-----------PLG-LIVPKL--KREGRELVTSHGKQDCSLKMWEYPRLHLIEELK-I-----HQERILSAVLS 414 (488)
Q Consensus 355 ~~~~~~-----------~~~-~~~~~~--~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~-~-----~~~~v~~~~~s 414 (488)
+..... .+. ..+.++ ..+|+..+. . ++-+..+|..+++...-.. . ....|.++.-.
T Consensus 352 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig---t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d 427 (758)
T 3ott_A 352 AGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIA---T-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFED 427 (758)
T ss_dssp TSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEE---E-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEEC
T ss_pred ccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEE---e-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEc
Confidence 321100 010 112222 344554443 3 4579999988765432211 1 12458888877
Q ss_pred CCCCEEEEEeCCCcEEEEecC
Q psy14511 415 PDQTCVAAASADETISIWNCF 435 (488)
Q Consensus 415 ~~~~~l~t~~~dg~v~iw~~~ 435 (488)
+++++.+ |+..+-|..+|..
T Consensus 428 ~~g~lWi-gT~~~Gl~~~~~~ 447 (758)
T 3ott_A 428 TAGQLWI-STCLGGIFVVDKH 447 (758)
T ss_dssp TTSEEEE-EESSSCEEEEEHH
T ss_pred CCCCEEE-EECCCceEEEccc
Confidence 7776544 6655567888754
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.66 E-value=0.34 Score=38.83 Aligned_cols=102 Identities=10% Similarity=-0.023 Sum_probs=59.2
Q ss_pred ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeecccccc--------EEEEEec--CCEEEEeecCCeEEEEECc
Q psy14511 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQ--------VIAMCWN--GNLLSCGTIGGNILHYDVR 312 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~~--~~~l~~~~~dg~i~i~d~~ 312 (488)
.+..++|+|+|...++ .+|.+.-.+..+.... .+.+.... ..++.+| |.+.++ .||.|+-++-.
T Consensus 42 ~~~~laf~P~G~LYaV---~~G~Ly~~~~~t~~~~-~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV---LNDKIYKGTPPTHDND-NWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE---ETTEEEEESCCCSTTC-CHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE---eCCeEEEECCCCCCcc-cccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 5779999998875554 4666666555431111 11111122 2566664 555555 67999888764
Q ss_pred CCCcc------ceeeecCCccEEEEEEccCCcEEEEEecCeEEEE
Q psy14511 313 THSDY------PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIW 351 (488)
Q Consensus 313 ~~~~~------~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iw 351 (488)
+.... ...-..--..+..+.|.|+|.+.+.. ++.+.-.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~ 159 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA 159 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence 32211 11111122457899999999999888 8775443
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.46 E-value=1.5 Score=35.12 Aligned_cols=131 Identities=11% Similarity=-0.059 Sum_probs=76.2
Q ss_pred cEEEEEEccCCcEEEEEecCeEEEEECCCCCCCcccc--ee----------eeeecCCCCEEEEEccCCCCeEEEEeCCC
Q psy14511 327 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLG--LI----------VPKLKREGRELVTSHGKQDCSLKMWEYPR 394 (488)
Q Consensus 327 ~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~~~~~--~~----------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~ 394 (488)
.+..++|+|+|.+.++ .+|.+.-.+..+.....-+. .. ...|.|+|.+.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav----~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV----SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE----ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe----CCCEEEEeCCCc
Confidence 5779999999997777 77887777765432221111 11 2277888888877 258898888654
Q ss_pred ccee------EEE-eeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcccc------cc--ccCCcceEEeecCCC
Q psy14511 395 LHLI------EEL-KIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK------AR--QVGSGSSLEFAILKQ 459 (488)
Q Consensus 395 ~~~~------~~~-~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~~~------~~--~~~~v~~~~~s~~~~ 459 (488)
...- ..+ ..-=..+..|.|.|+|.+.+.. |+.++-+.......... .. .-..-..+.|++++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 2111 111 1111468999999999988777 77754333322221111 11 111223466888777
Q ss_pred ceEEE
Q psy14511 460 PVSLT 464 (488)
Q Consensus 460 ~~~~~ 464 (488)
.....
T Consensus 195 l~~v~ 199 (236)
T 1tl2_A 195 LFGVQ 199 (236)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66443
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.41 E-value=0.18 Score=43.88 Aligned_cols=146 Identities=10% Similarity=0.052 Sum_probs=74.0
Q ss_pred cEEEE--ECCCeEEEEECCCCceEEEEecCCC-CCCceEE---EEE-c----CCCCeEEEEeCCCCcEEEEECCcceeee
Q psy14511 210 DTLAV--ALDTSVYTWNTKTNKTQLLVEYPTY-DNAYISC---VAW-K----PRTTDLAVTNTCTEYIDLWHEQEERLIQ 278 (488)
Q Consensus 210 ~~~~~--~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~i~~---~~~-~----~~~~~l~~~~~~~~~i~i~d~~~~~~~~ 278 (488)
.++++ ..||.|+.++..+|.....+..+.. ...++.. ... . ..+..++++ +.+|.+...|+.+|+.+.
T Consensus 57 ~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~G-s~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 57 ETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTG-SMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp EEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEEC-EEEEEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEE-ecCCEEEEEECCCCcEEE
Confidence 44544 4799999999988865544443210 1112221 000 0 034466777 899999999999999998
Q ss_pred eeccccc-------cEEEEE-------ecCCEEEEeecCCeEEEEECcCCCccceeee---cCCc--cE-EEEEEccCCc
Q psy14511 279 KLRTHMH-------QVIAMC-------WNGNLLSCGTIGGNILHYDVRTHSDYPTAIT---REGD--VV-CGLKWSPNGR 338 (488)
Q Consensus 279 ~~~~~~~-------~v~~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~--~i-~~~~~s~~~~ 338 (488)
.+..... ...|.. -.+..++.+..+..+.+.+ +++..-...+. .... ++ ..-..+.|+.
T Consensus 136 ~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~ 214 (339)
T 2be1_A 136 AFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGM 214 (339)
T ss_dssp EESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSC
T ss_pred EEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCc
Confidence 8864211 011111 1245677777666666655 33221000000 0000 00 0000122466
Q ss_pred EEEEEecCeEEEEECCCCC
Q psy14511 339 YLASGSNNTVKIWDFRQLD 357 (488)
Q Consensus 339 ~l~~~~d~~i~iwd~~~~~ 357 (488)
++++..||.|.-+|..++.
T Consensus 215 ~~~~~~dg~v~A~d~~~G~ 233 (339)
T 2be1_A 215 CIAPFRDKSLLASDLDFRI 233 (339)
T ss_dssp CEEEETTTEEEEECSTTCC
T ss_pred EEEECCCCEEEEEECCCCc
Confidence 6555446888888877654
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.42 E-value=6.7 Score=38.82 Aligned_cols=224 Identities=9% Similarity=0.022 Sum_probs=119.3
Q ss_pred CCcEEEEECCCeEEEEECCCCceEEEEecC----CCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec--
Q psy14511 208 YHDTLAVALDTSVYTWNTKTNKTQLLVEYP----TYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR-- 281 (488)
Q Consensus 208 ~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~-- 281 (488)
.+.+.+++. +-+.+++..+++........ ......|.++....+|..-+.+ ..| +.++.....-......
T Consensus 242 ~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT--~~G-l~~~~~~~~~~~~~~~~~ 317 (758)
T 3ott_A 242 NGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT--DYG-ISLSRYNSALQFIPISQI 317 (758)
T ss_dssp TCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE--SSS-EEEECCCC-CEEEEHHHH
T ss_pred CCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe--CCc-ccccccCCceeEEecccC
Confidence 467777774 56888888777654432211 1134568999888887655544 455 5444332211111110
Q ss_pred ---cccccEEEEEec-CCEEEEeecCCeEEEEECcCCCc-cceeee-------cCCccEEEEEEccCCcEEEEEecCeEE
Q psy14511 282 ---THMHQVIAMCWN-GNLLSCGTIGGNILHYDVRTHSD-YPTAIT-------REGDVVCGLKWSPNGRYLASGSNNTVK 349 (488)
Q Consensus 282 ---~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~d~~i~ 349 (488)
.....|.++..| ...|..|+.+| +..++..++.. ....+. -....|.++.-.++|++.+.. ++-+.
T Consensus 318 ~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~ 395 (758)
T 3ott_A 318 TGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSIN 395 (758)
T ss_dssp SCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEE
T ss_pred CCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHh
Confidence 123467888773 34555566554 66666554211 111111 112458888888888766544 66788
Q ss_pred EEECCCCCCCccc---------ceeeeee--cCCCCEEEEEccCCCCeEEEEeCCCc-----cee---EEEee----ccc
Q psy14511 350 IWDFRQLDAKRPL---------GLIVPKL--KREGRELVTSHGKQDCSLKMWEYPRL-----HLI---EELKI----HQE 406 (488)
Q Consensus 350 iwd~~~~~~~~~~---------~~~~~~~--~~~~~~l~~~~g~~~~~i~i~d~~~~-----~~~---~~~~~----~~~ 406 (488)
.||..+.+...-. ...+.++ ..+|+. .+ |...+-+..+|..+. ... ..+.. ...
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wi--gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 472 (758)
T 3ott_A 396 RYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQL-WI--STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGM 472 (758)
T ss_dssp EEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEE-EE--EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCS
T ss_pred hcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCE-EE--EECCCceEEEccccccccCCcceecccccccccccccc
Confidence 9998765321100 0011122 234443 33 344556888875421 111 11111 123
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc
Q psy14511 407 RILSAVLSPDQTCVAAASADETISIWNCFPRDKK 440 (488)
Q Consensus 407 ~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~ 440 (488)
.|.++...++|++.+.++..+-|..+|..+++..
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~ 506 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNNKGIDKINPRTREVT 506 (758)
T ss_dssp CEEEEEECTTSCEEEEETTCSSEEEEETTTTEEE
T ss_pred eeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceE
Confidence 5899999899987764444455888888765543
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.38 E-value=3.2 Score=35.08 Aligned_cols=221 Identities=11% Similarity=0.068 Sum_probs=116.7
Q ss_pred eeeeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec
Q psy14511 202 SGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR 281 (488)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~ 281 (488)
..+.......++.. ||.|+.|-.......-. +.. ....|..++.... +.++- . +|.|..|-......+..-.
T Consensus 27 ~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~-p~~--~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 27 DAIAGGYFHGLALK-GGKVLGWGANLNGQLTM-PAA--TQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp CEEEECSSEEEEEE-TTEEEEEECCSSSTTSC-CGG--GGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred cEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCC-Ccc--CCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 33444555666666 99999998664321111 111 2335666666443 33333 4 8888888654321111111
Q ss_pred cccccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCCCCCC-c
Q psy14511 282 THMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAK-R 360 (488)
Q Consensus 282 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~~~~~-~ 360 (488)
.-...|..++......++-. +|.|+.|-.....+.-... .....|..++...+. .++.. +|.+..|-....... .
T Consensus 99 ~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~-~~~~~i~~i~~G~~~-~~~l~-~G~v~~wG~n~~gqlg~ 174 (282)
T 3qhy_B 99 EARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPA-EAQSGVTALDGGVYT-ALAVK-NGGVIAWGDNYFGQTTV 174 (282)
T ss_dssp GGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSSE-EEEEE-TTEEEEEECCTTSTTSC
T ss_pred ccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCc-cCCCCeEEEEcccCE-EEEEE-CCEEEEecCCCCCCCCC
Confidence 12346888888666666666 9999999876544322111 122346666654333 23333 788888876643221 1
Q ss_pred --ccceeeeeecCCCCEEEEEccCCCCeEEEEeCCCcceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511 361 --PLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 361 --~~~~~~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
.+...+..++......++. .+|.++.|-......+..-......|..++...+...+++ ||.|+.|-.....
T Consensus 175 p~~~~~~v~~i~~G~~hs~al---~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~wG~n~~g 248 (282)
T 3qhy_B 175 PAEAQSGVDDVAGGIFHSLAL---KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAWGSSRTA 248 (282)
T ss_dssp CGGGGSSEEEEEECSSEEEEE---ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEESTTCCC
T ss_pred ceecCCCeEEEEecCCEEEEE---ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEecCCCCc
Confidence 1111222333333333332 3888888865432211111112235777776554333333 9999999877654
Q ss_pred cc
Q psy14511 439 KK 440 (488)
Q Consensus 439 ~~ 440 (488)
+.
T Consensus 249 q~ 250 (282)
T 3qhy_B 249 PS 250 (282)
T ss_dssp CG
T ss_pred cc
Confidence 44
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.08 E-value=0.93 Score=41.96 Aligned_cols=93 Identities=16% Similarity=0.092 Sum_probs=59.5
Q ss_pred EEEEEccc----CcccceeecccCceEEEEEEccCCcEEEEec--CCeEEEEeccccCc-----C-C---C-cccccccc
Q psy14511 17 ILHYDVRT----HSDYPTAITREGDVVCGLKWSPNGRYLASGS--NNTVKIWDFRQLDA-----K-R---P-QVNNQCHL 80 (488)
Q Consensus 17 i~iwd~~~----~~~~~~~~~~h~~~V~~l~~sp~g~~las~~--d~~i~vwd~~~~~~-----~-~---~-~~~~~~h~ 80 (488)
|.|.|... +..+ ..+-.-......+.++|||++++.++ +.++.|+|++.... . . . ..... -.
T Consensus 300 v~ViD~~~~~~~~~~~-~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G 377 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKF-TRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG 377 (638)
T ss_dssp CCEEECSCBTTBCCSS-EEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred eeEEccccccccCCce-EEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence 66777655 2222 22222333446688999999999988 99999999985211 0 0 0 01111 12
Q ss_pred cceeEEEEecCCCeEEeeeCCcccceEEEEecCC
Q psy14511 81 SAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMN 114 (488)
Q Consensus 81 ~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~ 114 (488)
-.....+|.++| +.+++-- .|..|..|++..
T Consensus 378 lGPlHt~Fd~~G-~aYTtlf--idSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDGRG-NAYTTLF--IDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECSSS-EEEEEET--TTTEEEEEEHHH
T ss_pred CcccEEEECCCC-ceEeeee--ecceEEEEeccH
Confidence 356778999999 5666665 399999999864
No 345
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.93 E-value=4.5 Score=35.54 Aligned_cols=59 Identities=10% Similarity=0.137 Sum_probs=35.8
Q ss_pred CCCEEEEEccCCCCeEEEEeCCCcceeEE--E-eeccccEEEEEEcCCCCEEEEEe-CCCcEEEEec
Q psy14511 372 EGRELVTSHGKQDCSLKMWEYPRLHLIEE--L-KIHQERILSAVLSPDQTCVAAAS-ADETISIWNC 434 (488)
Q Consensus 372 ~~~~l~~~~g~~~~~i~i~d~~~~~~~~~--~-~~~~~~v~~~~~s~~~~~l~t~~-~dg~v~iw~~ 434 (488)
+|+++++ ....+.|...++..++.... + ......+..+++.|||.++++.. .+| +||.+
T Consensus 288 ~g~l~v~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 288 QQKLFIG--ALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSG--ELLKV 350 (353)
T ss_dssp TTEEEEE--ETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTE--EEEEE
T ss_pred CCcEEEE--EccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCC--EEEEE
Confidence 4666665 45567777777765543332 1 12234789999999998666543 344 44444
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.10 E-value=9.5 Score=37.25 Aligned_cols=111 Identities=14% Similarity=0.061 Sum_probs=54.8
Q ss_pred CCceEEEeecC----CeEEEEEcccCccccee-------ecccCceEEEEEEccCCcEEEEec-C------CeEEEEecc
Q psy14511 4 NGNLLSCGTIG----GNILHYDVRTHSDYPTA-------ITREGDVVCGLKWSPNGRYLASGS-N------NTVKIWDFR 65 (488)
Q Consensus 4 dg~~la~g~~d----g~i~iwd~~~~~~~~~~-------~~~h~~~V~~l~~sp~g~~las~~-d------~~i~vwd~~ 65 (488)
++.+++.|+.+ ..+.+||..+++-.... +......-.++.+..++++++.|+ + ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 66777888753 46888998776422111 111111122233332788888776 2 367888887
Q ss_pred ccCcCCCcccccccccceeEEEEecCCCeEEeeeCCcccceEEEEecCCCee
Q psy14511 66 QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE 117 (488)
Q Consensus 66 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 117 (488)
+.+- ..+..+...... .+++...+++ +++.|+...++.+.+||+.+...
T Consensus 477 t~~W-~~~~~~p~~R~~-h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 477 TREW-SMIKSLSHTRFR-HSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTEE-EECCCCSBCCBS-CEEEECTTSC-EEEECCBCSSCSEEEEETTTTEE
T ss_pred CCcE-EECCCCCCCccc-ceEEEEcCCE-EEEECCCCCCCCEEEEECCCCce
Confidence 6331 111111111111 1222223555 44444421122688888877653
No 347
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.90 E-value=6 Score=34.54 Aligned_cols=221 Identities=9% Similarity=-0.017 Sum_probs=118.2
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--eeee----ccccccEEEEEec-----CCEEEEe---ecCCe
Q psy14511 240 DNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--IQKL----RTHMHQVIAMCWN-----GNLLSCG---TIGGN 305 (488)
Q Consensus 240 ~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--~~~~----~~~~~~v~~~~~~-----~~~l~~~---~~dg~ 305 (488)
.-.....++|.|+|+.+++- ...|.|++++...++. +..+ .........|+++ +..|+.. ..++.
T Consensus 30 gL~~P~~ia~~pdG~llVte-r~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSS-RDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCCcEEEEE-ecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 34467899999999866665 4489999998655432 2222 1235567888883 3444432 23455
Q ss_pred EEEEECcCCC-------ccce---eee---cCCccEEEEEEccCCcEEEEEec--------------CeEEEEECCCCC-
Q psy14511 306 ILHYDVRTHS-------DYPT---AIT---REGDVVCGLKWSPNGRYLASGSN--------------NTVKIWDFRQLD- 357 (488)
Q Consensus 306 i~i~d~~~~~-------~~~~---~~~---~~~~~i~~~~~s~~~~~l~~~~d--------------~~i~iwd~~~~~- 357 (488)
|.-|.+.... .... .+. .|. -..++|.|||.+.++.+| +.|.-.+....-
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 6666655411 1111 111 232 356999999987777542 444444443210
Q ss_pred CCccc---cee--------eeeecCCCCEEEEEccCCCCeEEEEeCCCc------------------ceeEEEeeccccE
Q psy14511 358 AKRPL---GLI--------VPKLKREGRELVTSHGKQDCSLKMWEYPRL------------------HLIEELKIHQERI 408 (488)
Q Consensus 358 ~~~~~---~~~--------~~~~~~~~~~l~~~~g~~~~~i~i~d~~~~------------------~~~~~~~~~~~~v 408 (488)
...++ ..+ -.+|.|+|++.++-.|. ++.-.|--+..+ .++..+..+....
T Consensus 187 ~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~-~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap 265 (347)
T 3das_A 187 PGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQ-DTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP 265 (347)
T ss_dssp TTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCS-SSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred CCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCC-CCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence 00000 011 11888888777664332 221222211111 1122332222356
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEecCCCCcc----c-cccccCCcceEEeecCCCceEEEE
Q psy14511 409 LSAVLSPDQTCVAAASADETISIWNCFPRDKK----R-KARQVGSGSSLEFAILKQPVSLTA 465 (488)
Q Consensus 409 ~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~~----~-~~~~~~~v~~~~~s~~~~~~~~~~ 465 (488)
..++|. ++..+...-..+.|....+...... . +....+.+..++..|||..+....
T Consensus 266 ~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 266 SGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred cceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 677775 4666666556667776677654321 1 122346788999999987665443
No 348
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.57 E-value=10 Score=34.71 Aligned_cols=103 Identities=9% Similarity=0.124 Sum_probs=59.4
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCccee--eeeecc------ccccEEEEEec-----CCEEEEeec------
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL--IQKLRT------HMHQVIAMCWN-----GNLLSCGTI------ 302 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~--~~~~~~------~~~~v~~~~~~-----~~~l~~~~~------ 302 (488)
.....++|.|+|+.+++- ...+.|++++..+++. +..+.. .......|+++ +..|+....
T Consensus 27 ~~P~~~a~~pdG~l~V~e-~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTE-RATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEE-cCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 356799999999866665 4445788887654432 222221 24567788885 556655542
Q ss_pred -------CCeEEEEECcCCC-------ccceeeec-CCccEEEEEEccCCcEEEEEec
Q psy14511 303 -------GGNILHYDVRTHS-------DYPTAITR-EGDVVCGLKWSPNGRYLASGSN 345 (488)
Q Consensus 303 -------dg~i~i~d~~~~~-------~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~d 345 (488)
...|.-++..... .....+.. .......|+|.|||++.++.+|
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2345556554321 01111111 1123678999999987777665
No 349
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.77 E-value=12 Score=33.06 Aligned_cols=64 Identities=14% Similarity=0.204 Sum_probs=46.3
Q ss_pred CCeEEEEECCCC--ceEEEEecCC---CCCCceEEEEEc---CC----CCeEEEEeCCCCcEEEEECCcceeeeee
Q psy14511 217 DTSVYTWNTKTN--KTQLLVEYPT---YDNAYISCVAWK---PR----TTDLAVTNTCTEYIDLWHEQEERLIQKL 280 (488)
Q Consensus 217 d~~v~iw~~~~~--~~~~~~~~~~---~~~~~i~~~~~~---~~----~~~l~~~~~~~~~i~i~d~~~~~~~~~~ 280 (488)
..+|.+||+.++ +.++.+.++. .....+..+++. |. +.+++++-...+.|.++|+.+++..+.+
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 357889999999 8888887752 124567888887 32 4566666456788999999998777665
No 350
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.31 E-value=17 Score=33.17 Aligned_cols=57 Identities=14% Similarity=0.278 Sum_probs=36.8
Q ss_pred eeeeC-CCcEEEEECCC-eEEEEECCCCceEEEEecCCC-----CCCceEEEEEcCC---CCeEEEE
Q psy14511 203 GLDWG-YHDTLAVALDT-SVYTWNTKTNKTQLLVEYPTY-----DNAYISCVAWKPR---TTDLAVT 259 (488)
Q Consensus 203 ~~~~~-~~~~~~~~~d~-~v~iw~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~---~~~l~~~ 259 (488)
.+.+. .+.++++...+ .|++++..++.......+... .......++|+|+ +..|+++
T Consensus 31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 31 ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 45553 35788888775 799998766655444433210 2456779999996 6677766
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=85.14 E-value=16 Score=30.74 Aligned_cols=140 Identities=11% Similarity=0.042 Sum_probs=75.4
Q ss_pred eeeCCCcEEEEECCCeEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeeccc
Q psy14511 204 LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH 283 (488)
Q Consensus 204 ~~~~~~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~~~ 283 (488)
+.......++.. +|.|+.|-........ .+......|..++...+ ..++- . +|.|..|-......+..-...
T Consensus 107 ia~G~~hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~--~~~~l-~-~G~v~~wG~n~~gqlg~p~~~ 178 (282)
T 3qhy_B 107 IAAGAWASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVY--TALAV-K-NGGVIAWGDNYFGQTTVPAEA 178 (282)
T ss_dssp EEEETTEEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSS--EEEEE-E-TTEEEEEECCTTSTTSCCGGG
T ss_pred EECcCCEEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccC--EEEEE-E-CCEEEEecCCCCCCCCCceec
Confidence 333455677777 9999999866422111 11102345666665433 33334 4 788988865542222111112
Q ss_pred cccEEEEEecCCEEEEeecCCeEEEEECcCCCccceeeecCCccEEEEEEccCCcEEEEEecCeEEEEECCC
Q psy14511 284 MHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ 355 (488)
Q Consensus 284 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~d~~i~iwd~~~ 355 (488)
...|..++......++- .+|.++.|-.....+.-.... ....|..++-.... .++.. ++.+..|-...
T Consensus 179 ~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G~~h-~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 179 QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTE-ALSGVSAIASGEWY-SLALK-NGKVIAWGSSR 246 (282)
T ss_dssp GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGG-GGSSCCEEEECSSC-EEEEE-TTEEEEESTTC
T ss_pred CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcc-cCCCceEEEcCCCE-EEEEE-CCEEEEecCCC
Confidence 35688888854444444 699999998765433221111 11235556554433 33444 77777775443
No 352
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=82.59 E-value=38 Score=33.07 Aligned_cols=219 Identities=7% Similarity=0.024 Sum_probs=114.0
Q ss_pred eEEEE-EcCCCCeEEEEeCCC----CcEEEEECCcceeeee-ec-cccc------cEEEEEe-cCCEEEEee--------
Q psy14511 244 ISCVA-WKPRTTDLAVTNTCT----EYIDLWHEQEERLIQK-LR-THMH------QVIAMCW-NGNLLSCGT-------- 301 (488)
Q Consensus 244 i~~~~-~~~~~~~l~~~~~~~----~~i~i~d~~~~~~~~~-~~-~~~~------~v~~~~~-~~~~l~~~~-------- 301 (488)
...+. ++|++++++++-+.. ..++++|+.+++.+.. +. .-+. ....++| +++.++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34445 889999888763333 3799999999877632 22 0001 1133466 555554432
Q ss_pred ---cCCeEEEEECcCCCc-cceeeecCCcc-EEEEEEccCCcE-----EEEEe-c---CeEEEEECCCCCCC-ccccee-
Q psy14511 302 ---IGGNILHYDVRTHSD-YPTAITREGDV-VCGLKWSPNGRY-----LASGS-N---NTVKIWDFRQLDAK-RPLGLI- 365 (488)
Q Consensus 302 ---~dg~i~i~d~~~~~~-~~~~~~~~~~~-i~~~~~s~~~~~-----l~~~~-d---~~i~iwd~~~~~~~-~~~~~~- 365 (488)
....++.|.+-+... -...+...... -.....++++++ +++.+ + ..+.+.+....... ..+...
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 124688888876532 22333333322 234556677662 44433 3 45666665532110 111100
Q ss_pred -ee-eecCCCCEEEEEcc--------CCCCeEEEEeCCCcc-------eeEE-Ee-eccccEEEEEEcCCCCEEEEEeCC
Q psy14511 366 -VP-KLKREGRELVTSHG--------KQDCSLKMWEYPRLH-------LIEE-LK-IHQERILSAVLSPDQTCVAAASAD 426 (488)
Q Consensus 366 -~~-~~~~~~~~l~~~~g--------~~~~~i~i~d~~~~~-------~~~~-~~-~~~~~v~~~~~s~~~~~l~t~~~d 426 (488)
.. ....++++++.... ...+.|...|+.++. .... +. .....+..+.|..+ .++++...+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~ 369 (711)
T 4hvt_A 291 DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDN 369 (711)
T ss_dssp TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEET
T ss_pred cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEEC
Confidence 11 23455655554211 146778899987642 2233 32 23446788999876 567777777
Q ss_pred Cc--EEEEecCCCC--ccc-c-ccccCCcceEEeecCCCceEE
Q psy14511 427 ET--ISIWNCFPRD--KKR-K-ARQVGSGSSLEFAILKQPVSL 463 (488)
Q Consensus 427 g~--v~iw~~~~~~--~~~-~-~~~~~~v~~~~~s~~~~~~~~ 463 (488)
+. +.++++.+++ ... . ....+.+.....++++..+.+
T Consensus 370 ~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~ 412 (711)
T 4hvt_A 370 VVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALI 412 (711)
T ss_dssp TEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEE
T ss_pred CEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEE
Confidence 64 6777776653 211 1 111234555555566555433
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.68 E-value=83 Score=32.06 Aligned_cols=39 Identities=5% Similarity=0.040 Sum_probs=32.9
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeec
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKT 123 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 123 (488)
.+.++...++..++++.+. |+++|+|++.+++++.....
T Consensus 237 ~~~~~~~~~~~~~lftl~~---D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSL---DYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEET---TCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEEC---CCEEEEEECCCCCeEeeecc
Confidence 5677888888888889887 99999999999998876554
No 354
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=71.92 E-value=56 Score=29.34 Aligned_cols=225 Identities=10% Similarity=0.083 Sum_probs=116.0
Q ss_pred eeeeeCCCcEEEEECCCeEEEEECCCC-c------------eEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEE
Q psy14511 202 SGLDWGYHDTLAVALDTSVYTWNTKTN-K------------TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDL 268 (488)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~v~iw~~~~~-~------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i 268 (488)
..+.......++...+|.|+.|-.... + ....+. ....|..++... .+.++- ..+|.|+.
T Consensus 78 ~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~----~~~~i~~va~G~--~hs~al-~~~G~v~~ 150 (423)
T 3mvd_K 78 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID----LPGKALCISAGD--SHSACL-LEDGRVFA 150 (423)
T ss_dssp EEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC----CSSCEEEEEECS--SEEEEE-ETTSCEEE
T ss_pred eEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc----CCCCEEEEEcCc--CeEEEE-eCCCeEEE
Confidence 345555677888889999999976431 1 011111 223566666543 333444 58899999
Q ss_pred EEC--Cc-cee---------eeeeccccccEEEEEecCCEEEEeecCCeEEEEECcCCCcc-------------------
Q psy14511 269 WHE--QE-ERL---------IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDY------------------- 317 (488)
Q Consensus 269 ~d~--~~-~~~---------~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------------------- 317 (488)
|-. .. ++. ..........|..++......++-..+|.|+.|-.....++
T Consensus 151 wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~ 230 (423)
T 3mvd_K 151 WGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDL 230 (423)
T ss_dssp EECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTT
T ss_pred EeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccc
Confidence 975 21 211 11111123467788877777778889999999975432211
Q ss_pred ---ceeeecCCccEEEEEEccCCcEEEE-EecCeEEEEECCCCCCCcc-----------cce---eeeeecCCCCEEEEE
Q psy14511 318 ---PTAITREGDVVCGLKWSPNGRYLAS-GSNNTVKIWDFRQLDAKRP-----------LGL---IVPKLKREGRELVTS 379 (488)
Q Consensus 318 ---~~~~~~~~~~i~~~~~s~~~~~l~~-~~d~~i~iwd~~~~~~~~~-----------~~~---~~~~~~~~~~~l~~~ 379 (488)
..........|..++.... ..++. ..++.+..|-.....+.-. ... .+..++......++
T Consensus 231 ~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~~ht~a- 308 (423)
T 3mvd_K 231 LRPTQLIITRAKPFEAIWATNY-CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVI- 308 (423)
T ss_dssp SSCEEECCTTCCCEEEEEEETT-EEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECSSEEEE-
T ss_pred cCCeEEeecCCccEEEEEECCc-EEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcccCeEEE-
Confidence 1111112234555554422 22333 2358888887554221110 000 01122222222222
Q ss_pred ccCCCCeEEEEeCCCc------------ceeEEEeeccccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy14511 380 HGKQDCSLKMWEYPRL------------HLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRD 438 (488)
Q Consensus 380 ~g~~~~~i~i~d~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~ 438 (488)
-..+|.|+.|-.... .....+..-...|..++.... .-+.-..||.|+.|=....-
T Consensus 309 -lt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~--hs~alt~~G~v~~wG~n~~G 376 (423)
T 3mvd_K 309 -LTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEV--CSYAVTIDGKLYSWGSGVNN 376 (423)
T ss_dssp -EETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETT--EEEEEETTSCEEEEECCTTS
T ss_pred -EeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCC--eEEEEcCCCCEEEECCCCCC
Confidence 145888888864321 111122222235777776543 34444789999999876543
No 355
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=71.66 E-value=23 Score=24.72 Aligned_cols=61 Identities=7% Similarity=-0.061 Sum_probs=30.0
Q ss_pred CceEEEeecCCeEEEEEcccCcccceeecccCceEEEEEEccCCcEEEEecCCeEEEEeccc
Q psy14511 5 GNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ 66 (488)
Q Consensus 5 g~~la~g~~dg~i~iwd~~~~~~~~~~~~~h~~~V~~l~~sp~g~~las~~d~~i~vwd~~~ 66 (488)
|.+.+.-..||.+.+|+...+..+-..-......-..+.+..+|++++...++.+ +|...+
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~t 84 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVSNT 84 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEECSC
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEECCC
Confidence 3333333467777777653222111111111111234677788888777655544 677544
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=68.09 E-value=23 Score=33.55 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=39.4
Q ss_pred eecCCCCEEEEEccC----------CCCeEEEEeCCCcceeEEEeec-cccEEEEEEcCCCCEEEEE
Q psy14511 368 KLKREGRELVTSHGK----------QDCSLKMWEYPRLHLIEELKIH-QERILSAVLSPDQTCVAAA 423 (488)
Q Consensus 368 ~~~~~~~~l~~~~g~----------~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~t~ 423 (488)
.|+|.|++++..-++ .+..+.+.+..+++..+-+.++ ..+++.++|+||++.|+..
T Consensus 482 ~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 482 GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 778888866653221 1234666677778877767666 4589999999999988765
No 357
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=68.04 E-value=65 Score=28.53 Aligned_cols=151 Identities=11% Similarity=0.146 Sum_probs=81.8
Q ss_pred eeeeCCCcEEEEECCCeEEEEECCCC---------ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCc
Q psy14511 203 GLDWGYHDTLAVALDTSVYTWNTKTN---------KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273 (488)
Q Consensus 203 ~~~~~~~~~~~~~~d~~v~iw~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~ 273 (488)
.+.......++...+|.|+.|-.... ...............+..++......+.++- ..+|.|..|-...
T Consensus 163 ~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l-~~~G~v~~wG~n~ 241 (389)
T 3kci_A 163 DVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL-TDDDTVWSWGDGD 241 (389)
T ss_dssp EEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEE-ETTTEEEEEECCG
T ss_pred EEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEE-ccCCEEEEEeCCC
Confidence 34445567788889999999975431 1111111211134567777765433455555 6899999996432
Q ss_pred c-----------eeeeeecc-ccccEEEEEecCCEEEEeecCCeEEEEECcCCCcc----------ceeeec-CCccEEE
Q psy14511 274 E-----------RLIQKLRT-HMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDY----------PTAITR-EGDVVCG 330 (488)
Q Consensus 274 ~-----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----------~~~~~~-~~~~i~~ 330 (488)
. .....+.. ....|..++......++-..+|.|+.|-.....++ ...+.. ....|..
T Consensus 242 ~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ 321 (389)
T 3kci_A 242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 321 (389)
T ss_dssp GGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEE
T ss_pred CCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEE
Confidence 1 11112222 22357777776677777788999999976432111 111111 1223555
Q ss_pred EEEccCCcEEEEEecCeEEEEECCC
Q psy14511 331 LKWSPNGRYLASGSNNTVKIWDFRQ 355 (488)
Q Consensus 331 ~~~s~~~~~l~~~~d~~i~iwd~~~ 355 (488)
++... ...++...+|.+..|-...
T Consensus 322 ia~G~-~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 322 IATGS-LHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEECS-SEEEEEETTCCEEEEECCT
T ss_pred EEecc-CeEEEECCCCCEEEeeCCC
Confidence 54432 2234444457777776543
No 358
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=67.27 E-value=97 Score=30.26 Aligned_cols=67 Identities=10% Similarity=0.058 Sum_probs=39.3
Q ss_pred CccCCceEEEeec-----CCeEEEEEcccCcccceeecc-cCc------eEEEEEEccCCcEEEEec-----------CC
Q psy14511 1 MCWNGNLLSCGTI-----GGNILHYDVRTHSDYPTAITR-EGD------VVCGLKWSPNGRYLASGS-----------NN 57 (488)
Q Consensus 1 ~~~dg~~la~g~~-----dg~i~iwd~~~~~~~~~~~~~-h~~------~V~~l~~sp~g~~las~~-----------d~ 57 (488)
+++|++++|.+-+ -..++++|+.+++.+...+.. -.. ....++|..+..++++.. ..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~ 216 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPN 216 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCC
Confidence 3568888875532 237999999998865443331 000 113347775555555421 25
Q ss_pred eEEEEecccc
Q psy14511 58 TVKIWDFRQL 67 (488)
Q Consensus 58 ~i~vwd~~~~ 67 (488)
.|+.|.+-+.
T Consensus 217 ~v~~~~~Gt~ 226 (711)
T 4hvt_A 217 SLYIWKRGES 226 (711)
T ss_dssp EEEEEETTSC
T ss_pred EEEEEECCCC
Confidence 7888887654
No 359
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=67.10 E-value=76 Score=28.99 Aligned_cols=27 Identities=22% Similarity=0.177 Sum_probs=21.4
Q ss_pred EEEEEEccCCc--EEEEEecCeEEEEECC
Q psy14511 328 VCGLKWSPNGR--YLASGSNNTVKIWDFR 354 (488)
Q Consensus 328 i~~~~~s~~~~--~l~~~~d~~i~iwd~~ 354 (488)
.+.|+|.|+|. +|++-..|.|++++..
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 57899999995 6666557999999754
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.38 E-value=50 Score=33.62 Aligned_cols=38 Identities=5% Similarity=0.078 Sum_probs=31.9
Q ss_pred CceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee
Q psy14511 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280 (488)
Q Consensus 242 ~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~ 280 (488)
..+.+++..++..++++- +.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl-~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVML-SLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEE-ETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEE-ECCCEEEEEECCCCCeEeee
Confidence 346777788888888888 89999999999999887765
No 361
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=63.68 E-value=34 Score=23.79 Aligned_cols=25 Identities=4% Similarity=0.045 Sum_probs=14.7
Q ss_pred EEEEccCCcEEEEEecCeEEEEECCC
Q psy14511 330 GLKWSPNGRYLASGSNNTVKIWDFRQ 355 (488)
Q Consensus 330 ~~~~s~~~~~l~~~~d~~i~iwd~~~ 355 (488)
.+.+..+|.+++...++.+ +|...+
T Consensus 60 ~l~l~~dGNLVl~d~~~~~-iW~S~t 84 (113)
T 3mez_B 60 FMRLGHSGELDITDDRLNT-VFVSNT 84 (113)
T ss_dssp EEEECTTSCEEEECTTSCE-EEECSC
T ss_pred EEEEeCCCcEEEECCCCCE-EEECCC
Confidence 4566777777665444443 676554
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=59.86 E-value=44 Score=31.39 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=40.0
Q ss_pred eecCCCCEEEEEccC----------CCCeEEEEeCCCcceeEEEeec-cccEEEEEEcCCCCEEEEEe
Q psy14511 368 KLKREGRELVTSHGK----------QDCSLKMWEYPRLHLIEELKIH-QERILSAVLSPDQTCVAAAS 424 (488)
Q Consensus 368 ~~~~~~~~l~~~~g~----------~~~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~t~~ 424 (488)
.|.++|.+.+..-+. ....+..++..+++....+.+. ...++.++||||++.|..+-
T Consensus 482 ~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 482 GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred EECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 788888877743111 1236777888788876666544 35799999999999887764
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=57.10 E-value=56 Score=34.16 Aligned_cols=36 Identities=6% Similarity=0.102 Sum_probs=29.4
Q ss_pred eEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeee
Q psy14511 244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280 (488)
Q Consensus 244 i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~ 280 (488)
+.+++..++..++++- +.|+++|+|++.+++++.+.
T Consensus 240 ~vs~~~~~~~~~lftL-~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVML-SLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEE-BTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEE-eCCCEEEEEECCCCCeEEee
Confidence 4455666777888888 99999999999999887764
No 364
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=55.35 E-value=1.1e+02 Score=27.00 Aligned_cols=230 Identities=13% Similarity=0.186 Sum_probs=121.7
Q ss_pred eeeCCCcEEEEECCCeEEEEECCCC---------ceEEEEecCCCCCCceEEEEEcCCCCeEEEEeCCCCcEEEEECCcc
Q psy14511 204 LDWGYHDTLAVALDTSVYTWNTKTN---------KTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEE 274 (488)
Q Consensus 204 ~~~~~~~~~~~~~d~~v~iw~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~ 274 (488)
+.......++...+|.|+.|-.... .......++......+..++++....+.++- ..+|.|+.|-....
T Consensus 58 i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al-~~~G~v~~wG~n~~ 136 (389)
T 3kci_A 58 LIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL-SSEGEVYSWGEAED 136 (389)
T ss_dssp EEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEE-ETTSCEEEEECCGG
T ss_pred EEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEE-cCCCCEEEEeCCCC
Confidence 3344566778889999999975421 1111111221133456667776666666666 78999999964321
Q ss_pred -----------eeeeeecc-ccccEEEEEecCCEEEEeecCCeEEEEECcCCCcc----------ceeee-cCCccEEEE
Q psy14511 275 -----------RLIQKLRT-HMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDY----------PTAIT-REGDVVCGL 331 (488)
Q Consensus 275 -----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----------~~~~~-~~~~~i~~~ 331 (488)
.....+.. ....|..++......++...+|.|+.|-.....++ ...+. .....|..+
T Consensus 137 GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~i 216 (389)
T 3kci_A 137 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 216 (389)
T ss_dssp GTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEE
T ss_pred CcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEE
Confidence 11122222 22367888887777788888999999976432110 11111 122346666
Q ss_pred EEcc-CCcEEEEEecCeEEEEECCCCCCCc-------cccee--------eeeecCCC-CEEEEEccCCCCeEEEEeCCC
Q psy14511 332 KWSP-NGRYLASGSNNTVKIWDFRQLDAKR-------PLGLI--------VPKLKREG-RELVTSHGKQDCSLKMWEYPR 394 (488)
Q Consensus 332 ~~s~-~~~~l~~~~d~~i~iwd~~~~~~~~-------~~~~~--------~~~~~~~~-~~l~~~~g~~~~~i~i~d~~~ 394 (488)
+... +...++...++.+..|-.....+.- ..... +....... ..++. ..+|.|+.|-...
T Consensus 217 a~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~al---t~~G~v~~wG~n~ 293 (389)
T 3kci_A 217 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL---TKSGAVYTWGKGD 293 (389)
T ss_dssp EECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEE---ETTSCEEEEECCG
T ss_pred EEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEE---eCCCeEEEEeCCC
Confidence 6544 2334444556999999754321110 00110 11111111 22222 4588899986532
Q ss_pred c--------c---eeEEEeec-cccEEEEEEcCCCCEEEEEeCCCcEEEEecCCCCc
Q psy14511 395 L--------H---LIEELKIH-QERILSAVLSPDQTCVAAASADETISIWNCFPRDK 439 (488)
Q Consensus 395 ~--------~---~~~~~~~~-~~~v~~~~~s~~~~~l~t~~~dg~v~iw~~~~~~~ 439 (488)
. + ....+... ...|..++... ...+....||.|+.|-....-+
T Consensus 294 ~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~--~h~~al~~~G~v~~wG~n~~Gq 348 (389)
T 3kci_A 294 YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQ 348 (389)
T ss_dssp GGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTCCEEEEECCTTST
T ss_pred CCCCCCCCCccccCCeEeccCCCCCEEEEEecc--CeEEEECCCCCEEEeeCCCCCc
Confidence 1 0 11111111 13466666533 3455567899999998775433
No 365
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=55.31 E-value=45 Score=23.07 Aligned_cols=24 Identities=17% Similarity=0.488 Sum_probs=14.3
Q ss_pred EEEEccCCcEEEEecCCeEEEEec
Q psy14511 41 GLKWSPNGRYLASGSNNTVKIWDF 64 (488)
Q Consensus 41 ~l~~sp~g~~las~~d~~i~vwd~ 64 (488)
.+.+..+|++++...++.+.+|..
T Consensus 53 ~l~l~~dGNLVl~~~~~~~~vW~S 76 (111)
T 3mez_A 53 TLRLNNRGQLEIHSANSNTPVWVY 76 (111)
T ss_dssp EEEECTTSCEEEECSSCSSCSEEE
T ss_pred EEEEcCCCcEEEEeCCCCEEEEEe
Confidence 456677777776655444446643
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.93 E-value=14 Score=38.62 Aligned_cols=40 Identities=5% Similarity=0.043 Sum_probs=32.7
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeecC
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTD 124 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~ 124 (488)
.+.+++..++..++++.+. |+++|+|++.+++++.+....
T Consensus 239 ~~vs~~~~~~~~~lftL~~---D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSL---DYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBT---TCEEEEEETTTTEEEEEEECC
T ss_pred eeEEeeccCCccEEEEEeC---CCEEEEEECCCCCeEEeechh
Confidence 4556677788888888887 999999999999998876543
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.10 E-value=1.4e+02 Score=29.05 Aligned_cols=36 Identities=28% Similarity=0.375 Sum_probs=27.7
Q ss_pred ceEEEEEcCCCCeEEEEeCCCCcEEEEECCcceeeeeec
Q psy14511 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLR 281 (488)
Q Consensus 243 ~i~~~~~~~~~~~l~~~~~~~~~i~i~d~~~~~~~~~~~ 281 (488)
.|.++.+ +..++++- +.|.++|+|++.+++++....
T Consensus 223 ~Is~~~~--~~~fLftL-~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVL-TQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEE-ETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEE-EcCCeEEEEEcCCCceEEeec
Confidence 3555554 35688888 899999999999988776654
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.03 E-value=32 Score=33.34 Aligned_cols=37 Identities=8% Similarity=0.144 Sum_probs=29.2
Q ss_pred ceeEEEEecCCCeEEeeeCCcccceEEEEecCCCeeeeeeec
Q psy14511 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKT 123 (488)
Q Consensus 82 ~v~~l~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 123 (488)
.|.++.+ +..++++.+. |.++|+|++.+++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~---Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQ---NCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEET---TCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEc---CCeEEEEEcCCCceEEeecc
Confidence 3555544 3668889887 99999999999998877665
No 369
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=41.14 E-value=91 Score=29.56 Aligned_cols=39 Identities=13% Similarity=0.207 Sum_probs=31.4
Q ss_pred eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEE
Q psy14511 219 SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT 259 (488)
Q Consensus 219 ~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 259 (488)
.+.+.+..+++....+..+ ...+++.++|+||++.|++.
T Consensus 510 ~~~~~~~~~g~~~rf~~~P--~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPATGEIRRFMVGP--IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECC--TTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCC--CCccCcCeeECCCCCEEEEE
Confidence 4666777788877777654 67899999999999998886
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=38.52 E-value=1.4e+02 Score=28.16 Aligned_cols=39 Identities=13% Similarity=0.207 Sum_probs=30.6
Q ss_pred eEEEEECCCCceEEEEecCCCCCCceEEEEEcCCCCeEEEE
Q psy14511 219 SVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT 259 (488)
Q Consensus 219 ~v~iw~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 259 (488)
.+..++..+++....+..+ ....++.++|+||++.|++.
T Consensus 510 ~v~~~dp~tGel~~fl~~P--~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGP--IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECC--TTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCC--CCccccCCEECCCCCEEEEE
Confidence 6777777788876666533 45679999999999999987
No 371
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=37.20 E-value=1e+02 Score=21.27 Aligned_cols=23 Identities=17% Similarity=0.436 Sum_probs=12.3
Q ss_pred EEEEccCCcEEEEEecCeEEEEE
Q psy14511 330 GLKWSPNGRYLASGSNNTVKIWD 352 (488)
Q Consensus 330 ~~~~s~~~~~l~~~~d~~i~iwd 352 (488)
.+.+..+|.+++...++...+|.
T Consensus 53 ~l~l~~dGNLVl~~~~~~~~vW~ 75 (111)
T 3mez_A 53 TLRLNNRGQLEIHSANSNTPVWV 75 (111)
T ss_dssp EEEECTTSCEEEECSSCSSCSEE
T ss_pred EEEEcCCCcEEEEeCCCCEEEEE
Confidence 45566666666554444334554
No 372
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=33.78 E-value=2.5e+02 Score=24.79 Aligned_cols=82 Identities=11% Similarity=-0.007 Sum_probs=50.4
Q ss_pred ceEEEEEEccCCcEEEE--ec-C-------------CeEEEEecccc--CcCCCccccc----ccccceeEEEEe---cC
Q psy14511 37 DVVCGLKWSPNGRYLAS--GS-N-------------NTVKIWDFRQL--DAKRPQVNNQ----CHLSAVKAIAWC---PW 91 (488)
Q Consensus 37 ~~V~~l~~sp~g~~las--~~-d-------------~~i~vwd~~~~--~~~~~~~~~~----~h~~~v~~l~~~---~~ 91 (488)
-.|..+...+++++=+. |. + ..|.+||+.+. +..+.+. +. .....+..+.+. |+
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~-~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYY-FPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEE-CCGGGCCCGGGEEEEEEEESCTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEE-CCHHhcccCCccceEEEecccCC
Confidence 36888888888875432 21 1 25889999886 4433222 11 123567788887 22
Q ss_pred ----CCeEEeeeCCcccceEEEEecCCCeeeeee
Q psy14511 92 ----EPTLLATGGGICDQTVRLWNSMNGKEKCHV 121 (488)
Q Consensus 92 ----~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~ 121 (488)
+.+...+-.. ...|.|+|+.+++..+..
T Consensus 166 ~~c~~~~aYItD~~--~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 166 GDCSETFVYITNFL--RGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp TTSCSEEEEEEETT--TTEEEEEETTTTEEEEEE
T ss_pred CCCCccEEEEEcCC--CCcEEEEECCCCcEEEEc
Confidence 3344445443 788999999998865544
No 373
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=27.33 E-value=3.1e+02 Score=23.94 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=26.9
Q ss_pred eEEEeecCCeEEEEEccc-Cccccee-ecccCceEEEEEEcc--CCcEEEEecCC
Q psy14511 7 LLSCGTIGGNILHYDVRT-HSDYPTA-ITREGDVVCGLKWSP--NGRYLASGSNN 57 (488)
Q Consensus 7 ~la~g~~dg~i~iwd~~~-~~~~~~~-~~~h~~~V~~l~~sp--~g~~las~~d~ 57 (488)
.|.+|+..| +.+++... +...... .......|.+|++.| ++++.+.+..+
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 566677677 55555432 2211111 012235799999999 56666655444
No 374
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=26.10 E-value=1.6e+02 Score=20.26 Aligned_cols=24 Identities=21% Similarity=0.437 Sum_probs=14.7
Q ss_pred EEEEccCCcEEEEecCCeEEEEecc
Q psy14511 41 GLKWSPNGRYLASGSNNTVKIWDFR 65 (488)
Q Consensus 41 ~l~~sp~g~~las~~d~~i~vwd~~ 65 (488)
.+.+..+|++++...++. .+|...
T Consensus 54 ~l~l~~~GnLvl~d~~~~-~vW~S~ 77 (115)
T 2dpf_A 54 RLTLLSDGNLVIYDHNNN-DVWGSA 77 (115)
T ss_dssp EEEECTTSCEEEECTTCC-EEEECC
T ss_pred EEEECCCCcEEEECCCce-EEEEcC
Confidence 466777787777654443 467643
No 375
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=25.87 E-value=3.8e+02 Score=24.39 Aligned_cols=54 Identities=19% Similarity=0.143 Sum_probs=34.1
Q ss_pred eEEEEEEccCCc--EEEEecCCeEEEEeccccCcCCCccccc---------ccccceeEEEEecC
Q psy14511 38 VVCGLKWSPNGR--YLASGSNNTVKIWDFRQLDAKRPQVNNQ---------CHLSAVKAIAWCPW 91 (488)
Q Consensus 38 ~V~~l~~sp~g~--~las~~d~~i~vwd~~~~~~~~~~~~~~---------~h~~~v~~l~~~~~ 91 (488)
.-..|+|.|||. +|++-..|.|++++.........+..+. ........|+|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 347899999985 6766668999999754321111211111 11456789999996
No 376
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=24.38 E-value=1.7e+02 Score=19.91 Aligned_cols=24 Identities=21% Similarity=0.440 Sum_probs=12.5
Q ss_pred EEEEccCCcEEEEEecCeEEEEECC
Q psy14511 330 GLKWSPNGRYLASGSNNTVKIWDFR 354 (488)
Q Consensus 330 ~~~~s~~~~~l~~~~d~~i~iwd~~ 354 (488)
.+.+..+|.+++...++. .+|...
T Consensus 53 ~l~l~~dGNLvl~~~~~~-~~W~S~ 76 (109)
T 3dzw_A 53 HLSMQSDGNLVVYSPRNN-PIWASN 76 (109)
T ss_dssp EEEECTTSCEEEECTTSC-EEEECC
T ss_pred EEEEeCCCCEEEECCCCC-EEEECC
Confidence 355666666665543333 366543
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=23.84 E-value=2.1e+02 Score=26.45 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=0.0
Q ss_pred cCCCCEEEEEccCCCCeEEEEeCCCcc--------eeEEEee--ccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy14511 370 KREGRELVTSHGKQDCSLKMWEYPRLH--------LIEELKI--HQERILSAVLSPDQTCVAAASADETISI 431 (488)
Q Consensus 370 ~~~~~~l~~~~g~~~~~i~i~d~~~~~--------~~~~~~~--~~~~v~~~~~s~~~~~l~t~~~dg~v~i 431 (488)
..++.+-+.-.|..+|.|.-.-+.... .+.++.- ...+|..|.++++..+|..++.++.++|
T Consensus 416 ~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 416 AEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred cCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
No 378
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.03 E-value=3.8e+02 Score=23.40 Aligned_cols=96 Identities=8% Similarity=-0.022 Sum_probs=48.9
Q ss_pred CcEEEEECCCeEEEEECCC-C-ceEEEEecCCCCCCceEEEEEcC-CCCeEEEEeCCCC----cEEEEECCcceeeeeec
Q psy14511 209 HDTLAVALDTSVYTWNTKT-N-KTQLLVEYPTYDNAYISCVAWKP-RTTDLAVTNTCTE----YIDLWHEQEERLIQKLR 281 (488)
Q Consensus 209 ~~~~~~~~d~~v~iw~~~~-~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~----~i~i~d~~~~~~~~~~~ 281 (488)
+.+++++..| +.+++... + ......... ....+.++++.| +...+.++ +..| .|...+ +.++.-..+.
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~--~~~~v~~i~~dp~~~~~l~~g-~~~g~~g~gl~~s~-D~G~tW~~~~ 97 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVF--LGHTIHHIVQDPREPERMLMA-ARTGHLGPTVFRSD-DGGGNWTEAT 97 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEES--TTSEEEEEEECSSSTTCEEEE-EEC--CCEEEEEES-STTSCCEECS
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccC--CCCceEEEEECCCCCCeEEEE-ecCCCCCccEEEeC-CCCCCceECC
Confidence 4677777766 55555443 2 332221111 456799999998 23344444 3344 343332 2222211111
Q ss_pred ------c--------ccccEEEEEec----CCEEEEeecCCeEEEE
Q psy14511 282 ------T--------HMHQVIAMCWN----GNLLSCGTIGGNILHY 309 (488)
Q Consensus 282 ------~--------~~~~v~~~~~~----~~~l~~~~~dg~i~i~ 309 (488)
. ....|.++.++ ...+.++...+.|...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 98 RPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp BCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred ccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 1 11257777774 6777777776665544
Done!