RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14511
(488 letters)
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 82.9 bits (203), Expect = 4e-18
Identities = 37/320 (11%), Positives = 86/320 (26%), Gaps = 39/320 (12%)
Query: 36 GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP--QVNNQCHLSAVKAIAWCPWEP 93
G+VVC + S R++ +G VK+WD K P Q++ + +++ P +
Sbjct: 51 GEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DG 109
Query: 94 TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153
L GG ++ + + K + + + IS + S
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLA 213
+ L + +
Sbjct: 170 LHNQTLVR---------------------------------QFQGHTDGASCIDISNDGT 196
Query: 214 VALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273
+ + + + I + + P LAV + L +
Sbjct: 197 KLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256
Query: 274 ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
++ L + + G + + + ++E V
Sbjct: 257 DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA--SIFQSKESSSVLSCDI 314
Query: 334 SPNGRYLASGS-NNTVKIWD 352
S + +Y+ +GS + +++
Sbjct: 315 SVDDKYIVTGSGDKKATVYE 334
Score = 46.7 bits (109), Expect = 3e-06
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 325 GDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLI 365
G+VVC + S R++ +G VK+WD K P+ +
Sbjct: 51 GEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQL 91
Score = 44.0 bits (102), Expect = 2e-05
Identities = 7/64 (10%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
+ G + + + ++E V S + +Y+ +GS +
Sbjct: 273 FAYCGKWFVSTGKDNLLNAWRTPYGA--SIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330
Query: 60 KIWD 63
+++
Sbjct: 331 TVYE 334
Score = 39.8 bits (91), Expect = 6e-04
Identities = 32/250 (12%), Positives = 67/250 (26%), Gaps = 6/250 (2%)
Query: 211 TLAVALDTSVYTWNTKTNKTQLLVEYPTYDN--AYISCVAWKPRTTDLAV---TNTCTEY 265
+ V W+ + V N YI P L V +T + +
Sbjct: 65 HVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124
Query: 266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325
+ +A+ + + GNI +D+ +
Sbjct: 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 184
Query: 326 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLK-REGRELVTSHGKQD 384
C + + G +NTV+ WD R+ + +
Sbjct: 185 GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME 244
Query: 385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR 444
S + +L +H+ +LS + + D ++ W +++
Sbjct: 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK 304
Query: 445 QVGSGSSLEF 454
+ S S +
Sbjct: 305 ESSSVLSCDI 314
Score = 32.9 bits (73), Expect = 0.090
Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 6/125 (4%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
+ + + T G + + L + P G +LA G ++
Sbjct: 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNV 248
Query: 61 IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
K + H S V ++ + ++TG D + W + G
Sbjct: 249 EVLHVN---KPDKYQLHLHESCVLSLKFAYCGKWFVSTGK---DNLLNAWRTPYGASIFQ 302
Query: 121 VKTDS 125
K S
Sbjct: 303 SKESS 307
Score = 30.2 bits (66), Expect = 0.52
Identities = 15/121 (12%), Positives = 30/121 (24%), Gaps = 5/121 (4%)
Query: 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGSNNTV 59
+ G G + +D+ + + + + K P+G L G +
Sbjct: 62 PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120
Query: 60 KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC 119
R + A A+A P + L N ++
Sbjct: 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 180
Query: 120 H 120
Sbjct: 181 G 181
Score = 28.6 bits (62), Expect = 1.7
Identities = 7/43 (16%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 404 HQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQV 446
H E + + +S V + +W+ K Q+
Sbjct: 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL 91
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 77.9 bits (190), Expect = 2e-16
Identities = 38/325 (11%), Positives = 92/325 (28%), Gaps = 34/325 (10%)
Query: 37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
V + + P + S S + T+K+WD + + + H +V+ I++
Sbjct: 18 SPVTRVIFHPVFSVMVSASEDATIKVWD---YETGDFERTLKGHTDSVQDISFDHS---- 70
Query: 96 LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155
C + + + + +
Sbjct: 71 -----------------GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG 113
Query: 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215
+++ S+ ++T + + + P+ S + VA
Sbjct: 114 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 173
Query: 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYIS-----CVAWKPRTTDLAVTNTCTEYIDLWH 270
+ + + P + IS + ++ + + I +W
Sbjct: 174 TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 233
Query: 271 EQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVV 328
+ L H + V + + G + + +D + T + V
Sbjct: 234 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT-LNAHEHFV 292
Query: 329 CGLKWSPNGRYLASGS-NNTVKIWD 352
L + Y+ +GS + TVK+W+
Sbjct: 293 TSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 62.1 bits (149), Expect = 3e-11
Identities = 38/239 (15%), Positives = 76/239 (31%), Gaps = 29/239 (12%)
Query: 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280
+ + + + D V+ + + I +W Q ++
Sbjct: 80 DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 139
Query: 281 RTHMHQVIAMCWN--GNLLSCGTIGGNILHYDVRT---------HSDYPTAITREGDVVC 329
H V + N G L++ + + + V T H I+ +
Sbjct: 140 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSY 199
Query: 330 G----------LKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL-----GLIVPKLKREG 373
K G +L SGS + T+K+WD L + G
Sbjct: 200 SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 259
Query: 374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIW 432
+ +++ D +L++W+Y ++ L H+ + S V S D+T+ +W
Sbjct: 260 KFILS--CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 57.1 bits (136), Expect = 1e-09
Identities = 38/243 (15%), Positives = 84/243 (34%), Gaps = 31/243 (12%)
Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL 276
D ++ W+ +T + ++ + + T + + E
Sbjct: 38 DATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR 95
Query: 277 IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN 336
H +++ NG+ + + I ++V+T T T + V ++ + +
Sbjct: 96 TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT-FTGHREWVRMVRPNQD 154
Query: 337 GRYLASGSN-NTVKIWDFRQLDAKRPL-------------------------GLIVPKLK 370
G +AS SN TV++W + K L G K
Sbjct: 155 GTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 214
Query: 371 REGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETIS 430
+ G L++ G +D ++KMW+ + L H + + + + + D+T+
Sbjct: 215 KPGPFLLS--GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 272
Query: 431 IWN 433
+W+
Sbjct: 273 VWD 275
Score = 56.7 bits (135), Expect = 2e-09
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
G L G+ I +DV T T + + V G+ + G+++ S + + T+
Sbjct: 213 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGVLFHSGGKFILSCADDKTL 271
Query: 60 KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLW 110
++WD++ KR H V ++ + P + TG DQTV++W
Sbjct: 272 RVWDYKN---KRCMKTLNAHEHFVTSLDFHKTAP-YVVTGSV--DQTVKVW 316
Score = 43.6 bits (101), Expect = 3e-05
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
G + + +D + T + V L + Y+ +GS + TV
Sbjct: 255 FHSGGKFILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFHKTAPYVVTGSVDQTV 313
Query: 60 KIWD 63
K+W+
Sbjct: 314 KVWE 317
Score = 42.8 bits (99), Expect = 6e-05
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL---GLIVPKLKREGRELVTSHG 381
V + + P + S S + T+K+WD+ D +R L V + + + +
Sbjct: 18 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 77
Query: 382 KQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC 434
D ++K+W++ I + H + S + P+ + +AS D+TI +W
Sbjct: 78 SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Score = 36.3 bits (82), Expect = 0.007
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 388 KMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKR 441
K W PR L H+ + + P + + +AS D TI +W+ D +R
Sbjct: 1 KEWI-PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 53
Score = 32.4 bits (72), Expect = 0.094
Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 22/148 (14%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTV 59
+ NG+ + + I ++V+T T T + V ++ + +G +AS SN TV
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTV 167
Query: 60 KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGG-----------------GI 102
++W K + + H V+ I+W P + G
Sbjct: 168 RVWVVAT---KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 224
Query: 103 CDQTVRLWNSMNGKEKCHVKTDSQQAND 130
D+T+++W+ G +
Sbjct: 225 RDKTIKMWDVSTGMCLMTLVGHDNWVRG 252
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 74.5 bits (181), Expect = 3e-15
Identities = 49/322 (15%), Positives = 96/322 (29%), Gaps = 18/322 (5%)
Query: 44 WSPNGRYLASGSN-NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI 102
G + SGS+ NT+K+W + H V + +T +
Sbjct: 23 LQFCGNRIVSGSDDNTLKVWS---AVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL 79
Query: 103 CDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQS 162
++ +++ + + + + G + +
Sbjct: 80 KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA 139
Query: 163 KRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA--LDTSV 220
R V G VK + + V+ LDTS+
Sbjct: 140 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSI 199
Query: 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280
W+ +T + T + S + K ++ + D+ Q + +Q
Sbjct: 200 RVWDVETGN---CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGP 256
Query: 281 RTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPN 336
H V + +N N + + G + +D++T +T E G VV ++ S
Sbjct: 257 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 316
Query: 337 GRYLASGSNN-----TVKIWDF 353
A GS N + + DF
Sbjct: 317 KLVCAVGSRNGTEETKLLVLDF 338
Score = 59.4 bits (142), Expect = 3e-10
Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 17/205 (8%)
Query: 243 YISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTI 302
+++ V V+ + +W + E + L+ H ++V ++ ++G + G++
Sbjct: 136 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSL 195
Query: 303 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASG-SNNTVKIWDFRQLDAKRP 361
+I +DV T + T + L SG +++TVKIWD + +
Sbjct: 196 DTSIRVWDVETGNCIHTLTGHQSLTSG---MELKDNILVSGNADSTVKIWDIKTGQCLQT 252
Query: 362 LGLIVPKLKREGRELVTSH----GKQDCSLKMWEYPRLHLIEELKI-----HQERILSAV 412
L + D ++K+W+ I L +
Sbjct: 253 LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIR 312
Query: 413 LSPDQTCVAAASADET----ISIWN 433
S + A S + T + + +
Sbjct: 313 ASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 39.8 bits (91), Expect = 5e-04
Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 8/212 (3%)
Query: 223 WNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRT 282
W K+ +++ +D+ I+C+ + + V+ + + +W + ++ L
Sbjct: 1 WRRGELKSPKVLK--GHDDHVITCLQFCG---NRIVSGSDDNTLKVWSAVTGKCLRTLVG 55
Query: 283 HMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLAS 342
H V + N++ G+ + ++ T T V C +
Sbjct: 56 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 115
Query: 343 GSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELK 402
+ V + Q G + + G D +K+W+ + L+
Sbjct: 116 DATLRVWDIETGQCLHVLM-GHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 174
Query: 403 IHQERILSAVLSPDQTCVAAASADETISIWNC 434
H R+ L D V + S D +I +W+
Sbjct: 175 GHTNRV--YSLQFDGIHVVSGSLDTSIRVWDV 204
Score = 39.4 bits (90), Expect = 6e-04
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE----GDVVCGLKWSPNGRYLASGSN 56
+ +N N + + G + +D++T +T E G VV ++ S A GS
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 325
Query: 57 N-----TVKIWDF 64
N + + DF
Sbjct: 326 NGTEETKLLVLDF 338
Score = 27.1 bits (58), Expect = 5.4
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Query: 351 WDFRQLDAKRPL----GLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQE 406
W +L + + L ++ L+ G +V+ G D +LK+W + L H
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVS--GSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 407 RILSAVLSPDQTCVAAASADETISIWNCFP 436
+ S+ + + + +
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGE 88
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 74.1 bits (180), Expect = 5e-15
Identities = 31/320 (9%), Positives = 82/320 (25%), Gaps = 15/320 (4%)
Query: 37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
D + +K P+ L S + ++ ++ F + + + + +
Sbjct: 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQ 71
Query: 96 LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155
+ G + + + ++ L+ +
Sbjct: 72 IYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRN 131
Query: 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215
++ L KVK K + S + + + L
Sbjct: 132 YGD---------GVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED 182
Query: 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER 275
+ ++ K + + + S + + + + R
Sbjct: 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242
Query: 276 LIQKLRTHMHQVIAMCWNGN--LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
L K + V ++ ++ L G I ++++T D V K
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV--KI 300
Query: 334 SPNGRYLASGS-NNTVKIWD 352
+ + L + ++T K
Sbjct: 301 ACSDNILCLATSDDTFKTNA 320
Score = 41.8 bits (96), Expect = 1e-04
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 326 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL 362
D + +K P+ L S + ++ ++ F L
Sbjct: 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL 49
Score = 39.8 bits (91), Expect = 5e-04
Identities = 26/273 (9%), Positives = 60/273 (21%), Gaps = 31/273 (11%)
Query: 204 LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCT 263
++ + L + + T + T + A + D + +
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 264 EYIDLWHEQEERLIQKLR--------THMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS 315
I++ + +++ M N + L G + + +
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181
Query: 316 DYPTAITREGDV---VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKR 371
D I G A S + V + F
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241
Query: 372 EGRELVTSHGKQ------------------DCSLKMWEYPRLHLIEELKIHQERILSAVL 413
T+ D + W I+ E +
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKI 300
Query: 414 SPDQTCVAAASADETISIWNCFPRDKKRKARQV 446
+ + A++D+T + + A +
Sbjct: 301 ACSDNILCLATSDDTFKTNAAIDQTIELNASSI 333
Score = 38.3 bits (87), Expect = 0.001
Identities = 37/279 (13%), Positives = 72/279 (25%), Gaps = 32/279 (11%)
Query: 209 HDTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267
L + D S+ + + + + C + T T I
Sbjct: 23 KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82
Query: 268 LWHEQE---ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE 324
+ + ++ + + L + G I D R + D A+
Sbjct: 83 KVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142
Query: 325 GDVVCG------LKWSPNGRYLASGSNNTVKIWDFRQLDAKR------------------ 360
+ + R + +N+ V+ + +
Sbjct: 143 NSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL 202
Query: 361 -PLGLIVPKLKREGR---ELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPD 416
+GR E G S K + + L + + S SP
Sbjct: 203 PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR 262
Query: 417 QTCVAAASADETISIWNCFPRDKKRKARQVGSGSSLEFA 455
+ A +D IS WN R K + + S ++ A
Sbjct: 263 HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301
Score = 37.5 bits (85), Expect = 0.003
Identities = 6/49 (12%), Positives = 22/49 (44%)
Query: 397 LIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQ 445
+++ + ++ I + P ++ + S D +++++ + K Q
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ 51
Score = 35.6 bits (80), Expect = 0.010
Identities = 21/133 (15%), Positives = 33/133 (24%), Gaps = 19/133 (14%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV---VCGLKWSPNGRYLASGS-N 56
M N + L G + + + D I G A S +
Sbjct: 156 MDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID 215
Query: 57 NTVKIWDF------------RQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICD 104
V + F R + + V +I + P L G D
Sbjct: 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG---SD 272
Query: 105 QTVRLWNSMNGKE 117
+ WN K+
Sbjct: 273 GIISCWNLQTRKK 285
Score = 29.4 bits (64), Expect = 0.88
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 3/64 (4%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
L G I ++++T D V K + + L + ++T
Sbjct: 259 FSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV--KIACSDNILCLATSDDTF 316
Query: 60 KIWD 63
K
Sbjct: 317 KTNA 320
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 73.2 bits (178), Expect = 8e-15
Identities = 51/358 (14%), Positives = 97/358 (27%), Gaps = 74/358 (20%)
Query: 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ 138
HL+ + A+ W + LL + D + +W+S + + S +
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSAS--QDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND 198
+ + + N
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHT--------------------------G 144
Query: 199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV 258
+ + + + + DT+ W+ +T + T D +S L V
Sbjct: 145 YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT----RLFV 200
Query: 259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNI-LHYDVRTHS 315
+ C LW +E Q H + A+C+ NGN + G+ L
Sbjct: 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260
Query: 316 DYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRE 375
+ + + +S +GR L +G +
Sbjct: 261 LMTYSHDNIICGITSVSFSKSGRLLLAGYD------------------------------ 290
Query: 376 LVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
D + +W+ + L H R+ ++ D VA S D + IWN
Sbjct: 291 --------DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 67.5 bits (163), Expect = 7e-13
Identities = 39/320 (12%), Positives = 85/320 (26%), Gaps = 39/320 (12%)
Query: 37 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLL 96
+ + W + R L S S + K+ + + S V A+ P +
Sbjct: 56 AKIYAMHWGTDSRLLVSASQDG-KLIIWDSYTTNKVHAIPLRS-SWVMTCAYAPSGNYVA 113
Query: 97 ATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRK 156
G L + +
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL 216
+ + D + L ++ A
Sbjct: 174 GQQTTTFTGHT-----------------------------GDVMSLSLAPDTRLFVSGAC 204
Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV-TNTCTEYIDLWHEQEER 275
D S W+ + + + I+ + + P A ++ T + +E
Sbjct: 205 DASAKLWDVREGMCRQTFTGHE---SDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261
Query: 276 LIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
+ + + ++ + +G LL G N +D +D + + V L
Sbjct: 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGV 320
Query: 334 SPNGRYLASGS-NNTVKIWD 352
+ +G +A+GS ++ +KIW+
Sbjct: 321 TDDGMAVATGSWDSFLKIWN 340
Score = 60.1 bits (144), Expect = 2e-10
Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 8/110 (7%)
Query: 4 NGNLLSCGTIGGNI-LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKI 61
NGN + G+ L + + + +S +GR L +G + +
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 62 WDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
WD H + V + + +ATG D +++WN
Sbjct: 297 WD---ALKADRAGVLAGHDNRVSCLGVTD-DGMAVATGSW--DSFLKIWN 340
Score = 52.8 bits (125), Expect = 4e-08
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 4/122 (3%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
+ + L G + +DVR T E D+ + + PNG A+GS++
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA-ICFFPNGNAFATGSDDATC 250
Query: 61 IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
+ D + ++ + + ++++ LLA D +W+++
Sbjct: 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD---DFNCNVWDALKADRAGV 307
Query: 121 VK 122
+
Sbjct: 308 LA 309
Score = 44.7 bits (104), Expect = 1e-05
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
+G LL G N +D +D + + V L + +G +A+GS ++ +
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 60 KIWD 63
KIW+
Sbjct: 337 KIWN 340
Score = 42.4 bits (98), Expect = 9e-05
Identities = 29/201 (14%), Positives = 58/201 (28%), Gaps = 9/201 (4%)
Query: 244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG--NLLSCGT 301
I + W + L + + + +W + + V+ + N ++CG
Sbjct: 58 IYAMHWGTDSRLLV-SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG 116
Query: 302 IGGNILHYDVRTH------SDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ 355
+ Y+++T S T L + + I +Q
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ 176
Query: 356 LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSP 415
V L + G D S K+W+ + H+ I + P
Sbjct: 177 TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP 236
Query: 416 DQTCVAAASADETISIWNCFP 436
+ A S D T +++
Sbjct: 237 NGNAFATGSDDATCRLFDLRA 257
Score = 30.1 bits (66), Expect = 0.60
Identities = 10/50 (20%), Positives = 21/50 (42%)
Query: 393 PRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRK 442
++ L+ H +I + D + +AS D + IW+ + +K
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Score = 29.7 bits (65), Expect = 0.77
Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 10/181 (5%)
Query: 263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGGNILHYDVRTHSDYPTA 320
T ID + R + LR H+ ++ AM W + LL + G ++ +D T + A
Sbjct: 34 TNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT-NKVHA 92
Query: 321 ITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPK-------LKREG 373
I V ++P+G Y+A G + + + R
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 374 RELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
+ D + +W+ H ++S L+PD + + D + +W+
Sbjct: 153 DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
Query: 434 C 434
Sbjct: 213 V 213
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 71.4 bits (173), Expect = 4e-14
Identities = 46/362 (12%), Positives = 96/362 (26%), Gaps = 78/362 (21%)
Query: 37 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKR---------------PQVNNQCHLS 81
VVC +K+S +G YLA+G N T +++ ++
Sbjct: 63 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDL 122
Query: 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKR 141
++++ + P LATG + + + D S +
Sbjct: 123 YIRSVCFSPDG-KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS- 180
Query: 142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYT 201
RTV L ++ + +P
Sbjct: 181 ------------------GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA 222
Query: 202 SGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD----NAYISCVAWKPRTTDLA 257
LD +V W+++T ++ + V + +
Sbjct: 223 GSLDR------------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 270
Query: 258 V-----------TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW--NGNLLSCGTIGG 304
D H V+++ N + G+
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330
Query: 305 NILHYDVRT---------HSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354
+L +D ++ H + ++ V G P A+GS + +IW ++
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISV----AVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Query: 355 QL 356
++
Sbjct: 387 KI 388
Score = 63.7 bits (153), Expect = 2e-11
Identities = 38/280 (13%), Positives = 87/280 (31%), Gaps = 28/280 (10%)
Query: 182 VKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDN 241
PE + + S +D Y + + ++++ ++
Sbjct: 105 ANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ 164
Query: 242 AYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGT 301
S + ++ + T I + L + + V +G ++ G+
Sbjct: 165 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS 224
Query: 302 IGGNILHYDVRTHSDYPT------AITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFR 354
+ + +D T + T D V + ++ +G+ + SGS + +VK+W+ +
Sbjct: 225 LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284
Query: 355 QLDAKRPLGLIVPKLKREGRELVTSH---------------GKQDCSLKMWEYPRLHLIE 399
+ K G +D + W+ + +
Sbjct: 285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 344
Query: 400 ELKIHQERILS------AVLSPDQTCVAAASADETISIWN 433
L+ H+ ++S + L P+ A S D IW
Sbjct: 345 MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 55.6 bits (132), Expect = 5e-09
Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 22/127 (17%)
Query: 2 CWNGNLLSCGTIGGNILHYDVRTHSD-----------YPTAITREGDVVCGLKWSPNGRY 50
+G + G++ ++ ++++ ++ D V + + N Y
Sbjct: 263 TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY 322
Query: 51 LASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP---WEP--TLLATGGGICD 104
+ SGS + V WD + P + Q H ++V ++A P + ATG G D
Sbjct: 323 ILSGSKDRGVLFWDKKS---GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSG--D 377
Query: 105 QTVRLWN 111
R+W
Sbjct: 378 CKARIWK 384
Score = 51.7 bits (122), Expect = 9e-08
Identities = 36/262 (13%), Positives = 73/262 (27%), Gaps = 42/262 (16%)
Query: 212 LAVALDTSVYTWNTKTNKTQLLVEYPTYDN---------------AYISCVAWKPRTTDL 256
LA + + + + + N YI V + P L
Sbjct: 77 LATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 136
Query: 257 AVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSD 316
A E + ++ + G +
Sbjct: 137 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 196
Query: 317 YPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLK----- 370
++ E V +G+Y+A+GS + V++WD L
Sbjct: 197 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 256
Query: 371 -------REGRELVTSHGKQDCSLKMWEYPRLHLIEE------------LKIHQERILSA 411
R+G+ +V+ G D S+K+W + + H++ +LS
Sbjct: 257 VYSVVFTRDGQSVVS--GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 314
Query: 412 VLSPDQTCVAAASADETISIWN 433
+ + + + S D + W+
Sbjct: 315 ATTQNDEYILSGSKDRGVLFWD 336
Score = 47.1 bits (110), Expect = 3e-06
Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 19/138 (13%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPT------AITREGDVVCGLKWSPNGRYLASG 54
+G ++ G++ + +D T + T D V + ++ +G+ + SG
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 55 S-NNTVKIWDFRQLDAKRPQ---------VNNQCHLSAVKAIAWCPWEPTLLATGGGICD 104
S + +VK+W+ + + K V H V ++A + +L+ D
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK---D 329
Query: 105 QTVRLWNSMNGKEKCHVK 122
+ V W+ +G ++
Sbjct: 330 RGVLFWDKKSGNPLLMLQ 347
Score = 45.6 bits (106), Expect = 1e-05
Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 21/110 (19%)
Query: 326 DVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDC 385
VVC +K+S +G YLA+G N T +++ L
Sbjct: 63 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARL---------------------SD 101
Query: 386 SLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCF 435
+ P I S SPD +A + D I IW+
Sbjct: 102 DSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE 151
Score = 45.2 bits (105), Expect = 1e-05
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 14/74 (18%)
Query: 4 NGNLLSCGTIGGNILHYDVRT---------HSDYPTAITREGDVVCGLKWSPNGRYLASG 54
N + G+ +L +D ++ H + ++ V G P A+G
Sbjct: 319 NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV----AVANGSSLGPEYNVFATG 374
Query: 55 S-NNTVKIWDFRQL 67
S + +IW ++++
Sbjct: 375 SGDCKARIWKYKKI 388
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 69.1 bits (167), Expect = 2e-13
Identities = 41/406 (10%), Positives = 99/406 (24%), Gaps = 65/406 (16%)
Query: 37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
+ + W+ + +A N+ V I++ + + H V + W P +
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE-LKEHNGQVTGVDWAP-DSNR 65
Query: 96 LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155
+ T G D+ +W K + + + +K+ + I
Sbjct: 66 IVTCGT--DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Query: 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215
+ N + I + + A +
Sbjct: 124 FEQENDWWVCKHIKKP-----------------------IRSTVLSLDWHPNSVLLAAGS 160
Query: 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER 275
D ++ + V
Sbjct: 161 CDFKCRIFSAYIKE----------------------------VEERPAPTPWGSKMPFGE 192
Query: 276 LIQKLRTHMHQV--IAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
L+ + + V + NG+ ++ + + D T + ++ +
Sbjct: 193 LMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAV-TF 251
Query: 334 SPNGRYLASGSNNTVKIWDFRQLDAK-RPLGLIVPKLKREGRELVTSHGKQDCSLKMWEY 392
+A+G + ++ + K G + + R L Q+ K
Sbjct: 252 ITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE 311
Query: 393 PRLHLIEELK-IHQERILSAVLSPD----QTCVAAASADETISIWN 433
L +H+ + + + D +SIW+
Sbjct: 312 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357
Score = 57.9 bits (138), Expect = 8e-10
Identities = 38/367 (10%), Positives = 96/367 (26%), Gaps = 25/367 (6%)
Query: 1 MCWN--GNLLSCGTIGGNILHYDVRTHSDYPTAITRE-GDVVCGLKWSPNGRYLASGS-N 56
WN ++ + Y+ + +E V G+ W+P+ + + +
Sbjct: 13 HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD 72
Query: 57 NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGK 116
+W + K V + + +A W P G + + +
Sbjct: 73 RNAYVWTLKGRTWKPTLVILRIN----RAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 117 EKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLG 176
+ K + +S L+ F+ ++ + + V
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC---RIFSAYIKEVEERPAPTP-- 183
Query: 177 KLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEY 236
E + E+ S + V+ D++V +
Sbjct: 184 --WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV---AT 238
Query: 237 PTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNL 296
+ + V + ++ +A + C + + +L R + + +
Sbjct: 239 LASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTAR 298
Query: 297 LSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY----LASGSN-NTVKIW 351
+ + + V + G+ + + IW
Sbjct: 299 ERFQNLDKKASSEGSAAAGAG--LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Query: 352 DFRQLDA 358
D R L++
Sbjct: 357 DVRSLES 363
Score = 46.4 bits (108), Expect = 5e-06
Identities = 16/116 (13%), Positives = 30/116 (25%), Gaps = 38/116 (32%)
Query: 326 DVVCGLKWSPNGRYLASGSNN-TVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQD 384
+ + W+ + +A NN V I++
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYE-------------------------------- 35
Query: 385 CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKK 440
+ + ELK H ++ +PD + D +W R K
Sbjct: 36 -----KSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 86
Score = 31.0 bits (68), Expect = 0.37
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 404 HQERILSAVLSPDQTCVAAASADETISIWN 433
E I + D+T +A + + I+
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYE 35
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 65.7 bits (158), Expect = 2e-12
Identities = 34/328 (10%), Positives = 71/328 (21%), Gaps = 26/328 (7%)
Query: 26 SDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKA 85
+ +P+ L +P G + + +V + + H
Sbjct: 7 ALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVP---VGSLTDTEIYTEHSHQTTV 63
Query: 86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS 145
P A+G VR+W++ + IS+ + KR
Sbjct: 64 AKTSPSGY-YCASGD--VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAV 120
Query: 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD 205
+ Q + ++ SG D
Sbjct: 121 GEGRERFGHVFLFDTGTSNGNLTGQA-------------RAMNSVDFKPSRPFRIISGSD 167
Query: 206 WGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY 265
T+ T + P + + +
Sbjct: 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 227
Query: 266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325
D + + + +G ++ + I ++V T T
Sbjct: 228 EDDSLKNVA------HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 281
Query: 326 DVVCGLKWSPNGRYLASGS-NNTVKIWD 352
L + L S S N + +
Sbjct: 282 IEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 43.0 bits (99), Expect = 5e-05
Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 23 RTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLS 81
D V GL WSP+G +AS S + T+KIW+ L ++
Sbjct: 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 284
Query: 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
I W L + + + N
Sbjct: 285 QQLGIIWT---KQALVSISA--NGFINFVN 309
Score = 37.6 bits (85), Expect = 0.003
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
+G ++ + I ++V T T L + L S S N +
Sbjct: 246 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 305
Query: 60 KIWD 63
+
Sbjct: 306 NFVN 309
Score = 35.3 bits (79), Expect = 0.012
Identities = 14/199 (7%), Positives = 39/199 (19%), Gaps = 3/199 (1%)
Query: 236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGN 295
A + + R +
Sbjct: 113 ESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA 172
Query: 296 LLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQ 355
+ + Y T D
Sbjct: 173 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL 232
Query: 356 LDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV-LS 414
+ + +G ++ + D ++K+W L + + + + + +
Sbjct: 233 KNVAHSGSVFGLTWSPDGTKIAS--ASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 290
Query: 415 PDQTCVAAASADETISIWN 433
+ + + SA+ I+ N
Sbjct: 291 WTKQALVSISANGFINFVN 309
Score = 35.3 bits (79), Expect = 0.013
Identities = 15/133 (11%), Positives = 26/133 (19%), Gaps = 39/133 (29%)
Query: 315 SDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGR 374
+ +P+ L +P G + + +V L
Sbjct: 7 ALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLT----------------- 49
Query: 375 ELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC 434
E H + A SP A+ + IW+
Sbjct: 50 ----------------------DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87
Query: 435 FPRDKKRKARQVG 447
K
Sbjct: 88 TQTTHILKTTIPV 100
Score = 29.1 bits (63), Expect = 1.1
Identities = 31/240 (12%), Positives = 56/240 (23%), Gaps = 19/240 (7%)
Query: 210 DTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVT---NTCTEYI 266
D + TSVYT + E T + + P A +
Sbjct: 30 DKIQYCNGTSVYTVPVGSLT---DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWD 86
Query: 267 DLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD 326
+ + + + I+ ++ G + +
Sbjct: 87 TTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA 146
Query: 327 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS 386
R S + + + K G S
Sbjct: 147 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 206
Query: 387 LKMWEYPRLHLIEELKIHQERILSAVLS-------------PDQTCVAAASADETISIWN 433
L+ + ++ + PD T +A+ASAD+TI IWN
Sbjct: 207 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 266
Score = 29.1 bits (63), Expect = 1.1
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 287 VIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-N 345
V+ G+ + G ++ V + +D T K SP+G Y ASG +
Sbjct: 22 VLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEI-YTEHSHQTTVAKTSPSGYYCASGDVH 79
Query: 346 NTVKIWDFRQ 355
V+IWD Q
Sbjct: 80 GNVRIWDTTQ 89
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 64.1 bits (154), Expect = 8e-12
Identities = 42/399 (10%), Positives = 101/399 (25%), Gaps = 61/399 (15%)
Query: 35 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP 93
V+ L Y+ +G+ + ++++D K+ + H V A+ +
Sbjct: 12 MTSVITCL--QFEDNYVITGADDKMIRVYD---SINKKFLLQLSGHDGGVWALKYAH--G 64
Query: 94 TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153
+L +G V + + + + +++ +++ G
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR-------CLDIVEYKNIKYIVTGSRD 117
Query: 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLA 213
+ V K + P L + + + G
Sbjct: 118 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSG 177
Query: 214 VALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQE 273
D ++ W+ K ++ T + R ++ T + E
Sbjct: 178 SY-DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 236
Query: 274 ERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKW 333
L ++ + + + G+ + ++ +
Sbjct: 237 YTLQGHTALVGLLRLSDKFLVSAAADGS------IRGWDANDYSRKFSYHHTNLSAITTF 290
Query: 334 SPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYP 393
+ L SGS N I++ R G+ + +
Sbjct: 291 YVSDNILVSGSENQFNIYNL-----------------RSGKLVHAN-------------- 319
Query: 394 RLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIW 432
+ ++I S T VAA D +
Sbjct: 320 -------ILKDADQIWSVNFKGK-TLVAAVEKDGQSFLE 350
Score = 57.2 bits (136), Expect = 2e-09
Identities = 37/353 (10%), Positives = 83/353 (23%), Gaps = 19/353 (5%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
+ + N + G I YD + ++ V LK++ G L SGS +
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKK-FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTV 76
Query: 61 IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
+ I ++ D T+ +W
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS---RDNTLHVWKLPKESSVPD 133
Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR 180
+ + + + + S RTVS + G
Sbjct: 134 HGEEHDYPLVFHTPEE------------NPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Query: 181 KVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240
+ ++ I++ Y ++ + + T
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHE-RKRCISASMDTTIRIWDLENGELMYTLQ 240
Query: 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCG 300
+ L R T++ + + N+L G
Sbjct: 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG 300
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDF 353
+ Y++R+ I ++ D + + + A + +
Sbjct: 301 S-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEIL 352
Score = 34.9 bits (78), Expect = 0.020
Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 7/116 (6%)
Query: 324 EGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPL----GLIVPKLKREGRELVT 378
V+ L Y+ +G+ + ++++D L G + G LV+
Sbjct: 12 MTSVITCL--QFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVS 69
Query: 379 SHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC 434
+ + + + E R L V + + S D T+ +W
Sbjct: 70 GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Score = 29.5 bits (64), Expect = 0.85
Identities = 6/34 (17%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 401 LKIHQERILSAVLSPDQTCVAAASADETISIWNC 434
L+ H +++ L + V + D+ I +++
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDS 40
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 63.7 bits (153), Expect = 2e-11
Identities = 44/347 (12%), Positives = 89/347 (25%), Gaps = 44/347 (12%)
Query: 45 SPNGRYLASGSN-NTVKIWDFRQLDAKRPQVNNQC---------HLSAVKAIAWCPWEPT 94
S + S S +K+WD + LD + P+ + H+ ++AI +E
Sbjct: 21 SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80
Query: 95 LLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEID 154
L+AT + + E V + D + + L + +
Sbjct: 81 LVATTS--FSGDLLFYRITREDETKKVIFEKLDLLDSDMK---KHSFWALKWGASNDRLL 135
Query: 155 RKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSG-----LDWGYH 209
+++ + + + LE + T +D
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 195
Query: 210 DTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCV--------------------A 248
+A + +V T + E + +
Sbjct: 196 GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255
Query: 249 WKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILH 308
+ H + L + + ++ +G L G +
Sbjct: 256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 315
Query: 309 YDVRTHSDYPTAITREGDV---VCGLKWSPNGRYLASGSNNTVKIWD 352
+DV+T T D+ L +G LA VK
Sbjct: 316 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 362
Score = 36.8 bits (83), Expect = 0.005
Identities = 15/121 (12%), Positives = 33/121 (27%), Gaps = 21/121 (17%)
Query: 334 SPNGRYLASGSN-NTVKIWDFRQLDAKRPLGLI------------------VPKLKREGR 374
S + S S +K+WD + LD + P + + E
Sbjct: 21 SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80
Query: 375 ELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNC 434
+ T L + R +++ + +L + + A + +
Sbjct: 81 LVAT--TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 138
Query: 435 F 435
Sbjct: 139 L 139
Score = 32.9 bits (73), Expect = 0.088
Identities = 18/93 (19%), Positives = 28/93 (30%), Gaps = 4/93 (4%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDV---VCGLKWSPNGRYLASGSNN 57
+G L G + +DV+T T D+ L +G LA
Sbjct: 297 FNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF 356
Query: 58 TVKIWDFRQLDAKRPQVNNQ-CHLSAVKAIAWC 89
VK +N C + ++I W
Sbjct: 357 DVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389
Score = 31.4 bits (69), Expect = 0.25
Identities = 27/285 (9%), Positives = 63/285 (22%), Gaps = 68/285 (23%)
Query: 217 DTSVYTWNTKTNKTQLLVEY---------PTYDNAYISCVAWKPRTTDLAVTNTCTEYID 267
D + W+ K + + + + + L T + + +
Sbjct: 33 DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLL 92
Query: 268 LWHEQEERLIQKLRT----------HMHQVIAMCWNG-------NLLSCGTIGGNILHYD 310
+ E +K+ H A+ W + L + G +
Sbjct: 93 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 152
Query: 311 VRTHSDYPTAITRE-----------------GDVVCGLKWSPNGRYLASGSNNTVKIWDF 353
+D ++T + S G +N TV+I +
Sbjct: 153 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISEL 212
Query: 354 RQLDAKRPLGLIVPKLKREG------------RELVTSHGKQDCSLKMWEY--------- 392
L + + + ++E
Sbjct: 213 STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 272
Query: 393 ----PRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
H ++S + + +A D + W+
Sbjct: 273 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 317
Score = 30.2 bits (66), Expect = 0.60
Identities = 9/49 (18%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Query: 401 LKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQVGSG 449
K H I S + S D + +W+ D + + S
Sbjct: 10 GKAHDADIFSVSACNSF--TVSCSGDGYLKVWDNKLLDNENPKDKSYSH 56
Score = 26.4 bits (56), Expect = 8.9
Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 13/108 (12%)
Query: 37 DVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP-WEP- 93
V L ++ +G L S + ++ WD + K H ++ +
Sbjct: 290 SWVMSLSFNDSGETLCSAGWDGKLRFWD---VKTKERITTLNMHCDDIEIEEDILAVDEH 346
Query: 94 -TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQA--NDETIS-YRE 137
LA G V+ +S D +I +RE
Sbjct: 347 GDSLAEPGVFD---VKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 391
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 58.8 bits (140), Expect = 3e-10
Identities = 30/319 (9%), Positives = 79/319 (24%), Gaps = 38/319 (11%)
Query: 37 DVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
+ L S +G+ L S + WD +V H + + I
Sbjct: 13 KAITALSSSADGKTLFSADAEGHINSWDIS--TGISNRVFPDVHATMITGIKTTSKGD-- 68
Query: 96 LATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDR 155
D +++ + ++ ++ ++ I
Sbjct: 69 --LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 126
Query: 156 KKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVA 215
L + + + + D +
Sbjct: 127 HGKLTEVPISYNSSC-----------------------------VALSNDKQFVAVGGQD 157
Query: 216 LDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEER 275
VY + + + +P + + E
Sbjct: 158 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT 217
Query: 276 LIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG--DVVCGLKW 333
T ++ + L+ G++ +++ +++ SD+P I V + W
Sbjct: 218 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW 277
Query: 334 SPNGRYLASGSNNTVKIWD 352
+++G ++ +K W+
Sbjct: 278 LNETTIVSAGQDSNIKFWN 296
Score = 43.1 bits (99), Expect = 4e-05
Identities = 40/356 (11%), Positives = 88/356 (24%), Gaps = 71/356 (19%)
Query: 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ 138
H A+ A++ + L + + + W+ G V D I +
Sbjct: 11 HNKAITALSSSA-DGKTLFSADA--EGHINSWDISTGISN-RVFPDVHATMITGIKTTSK 66
Query: 139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND 198
+S+ H + + + ++ N
Sbjct: 67 GDLFTVSWDDHLKVVPAGG-----------------------------SGVDSSKAVANK 97
Query: 199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV 258
+ L +A+ ++ V + +
Sbjct: 98 LSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQD 157
Query: 259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYP 318
+ + E + I + + + + +
Sbjct: 158 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT 217
Query: 319 TAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELV 377
+ T V + WSP+ LA+GS +N+V +W+ +
Sbjct: 218 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK---------------------- 255
Query: 378 TSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
P H I H +++V+ ++T + +A D I WN
Sbjct: 256 ---------------PSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 41.5 bits (95), Expect = 1e-04
Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
+ + + + + T V + WSP+ LA+GS +N+V
Sbjct: 189 NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 248
Query: 60 KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
+W+ + + +S+V ++ W T + + G D ++ WN
Sbjct: 249 IVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQ--DSNIKFWN 296
Score = 32.3 bits (71), Expect = 0.11
Identities = 28/275 (10%), Positives = 62/275 (22%), Gaps = 11/275 (4%)
Query: 4 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWD 63
+G L G+I +D+ T ++ G+K + G ++ +K+
Sbjct: 23 DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVP 82
Query: 64 FRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKE------ 117
+ S +A +A +
Sbjct: 83 AGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCV 142
Query: 118 ---KCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRT 174
+ + Y+ + + + + T R
Sbjct: 143 ALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRK 202
Query: 175 LGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLV 234
+ + +LD SV WN ++
Sbjct: 203 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262
Query: 235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW 269
+ + ++ V W TT ++ I W
Sbjct: 263 IKGAHAMSSVNSVIWLNETTIVSAGQDSN--IKFW 295
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 58.8 bits (140), Expect = 4e-10
Identities = 38/330 (11%), Positives = 87/330 (26%), Gaps = 22/330 (6%)
Query: 29 PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVN--NQCHLSAVKAI 86
P T+ L + P +A + + D+K P V S V +
Sbjct: 11 PQPSTQRNFTTH-LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTV 69
Query: 87 AWCPWEP-TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS 145
+ P + L +G V +W KE V+ + + +S
Sbjct: 70 KFSPIKGSQYLCSGD--ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGP-----ISDIS 122
Query: 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD 205
+ G + + +LG++ + L+ +
Sbjct: 123 WDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDG 182
Query: 206 WGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY 265
++ + K VE+ ++ V + + +
Sbjct: 183 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 242
Query: 266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHS---DYPTAIT 322
++ + + I +DV T +
Sbjct: 243 YIEDDQE--------PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ 294
Query: 323 REGDVVCGLKWSPNGRYLASGSNNTVKIWD 352
+ G+ G+ + NGR ++ + T+ ++
Sbjct: 295 QLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 38.7 bits (88), Expect = 0.001
Identities = 19/212 (8%), Positives = 64/212 (30%), Gaps = 21/212 (9%)
Query: 241 NAYISCVAWKPRTTDLAVTNTCTEYI-----DLWHEQEERLIQKLRTHMHQVIAMCWNGN 295
IS ++W L V + + + +
Sbjct: 115 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMR 174
Query: 296 LLSCGTIGGNILHYDVRT-----------HSDYPTAITREGDVVCGLKWSPNGRYLASGS 344
++ G G + + + + D + + R ++
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 234
Query: 345 NNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIH 404
+ + + + D + G I + ++ T D ++++W+ +++ +
Sbjct: 235 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGA--DATIRVWDVTTSKCVQKWTLD 292
Query: 405 QERILS---AVLSPDQTCVAAASADETISIWN 433
++++ + V++ + + S D T++ +
Sbjct: 293 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 38.7 bits (88), Expect = 0.001
Identities = 7/112 (6%), Positives = 24/112 (21%), Gaps = 4/112 (3%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
+ + Y + + A+ + T+
Sbjct: 216 DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATI 275
Query: 60 KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
++WD + + + + + + D T+ +
Sbjct: 276 RVWDVTTSKCVQ-KWTLDKQQLGNQQVGVVATGNGRIISLSL--DGTLNFYE 324
Score = 33.0 bits (73), Expect = 0.067
Identities = 23/251 (9%), Positives = 64/251 (25%), Gaps = 26/251 (10%)
Query: 209 HDTLAVAL--DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTT---------DLA 257
+ +A V + +K +V++ + ++ ++ V + P
Sbjct: 29 TNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK 88
Query: 258 VTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGN----LLSCGTIGGNILHYDVRT 313
V + + E + + + + + W+ + + +
Sbjct: 89 VIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS 148
Query: 314 HSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREG 373
+ + + ++ ++ K
Sbjct: 149 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFV 208
Query: 374 RELVTSHGKQD-----------CSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAA 422
R++ S + L IE+ + + + A+ D A
Sbjct: 209 RDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFAT 268
Query: 423 ASADETISIWN 433
AD TI +W+
Sbjct: 269 VGADATIRVWD 279
Score = 30.3 bits (66), Expect = 0.49
Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 318 PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRP 361
P T+ L + P +A + + D+K P
Sbjct: 11 PQPSTQRNFTTH-LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVP 53
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 57.2 bits (136), Expect = 1e-09
Identities = 40/296 (13%), Positives = 90/296 (30%), Gaps = 31/296 (10%)
Query: 77 QCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVK-----TDSQQANDE 131
C K + ++ + +G D T+++W+ + K + Q ++
Sbjct: 9 HCRSETSKGVYCLQYDDQKIVSGLR--DNTIKIWDKNTLECKRILTGHTGSVLCLQYDER 66
Query: 132 TISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE 191
I + + G ++ ++ + + R +
Sbjct: 67 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT 126
Query: 192 APSIINDFYTSG-----LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISC 246
++ +D+ ++ + D ++ WNT T + N +
Sbjct: 127 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV------RTLNGHKRG 180
Query: 247 VAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNI 306
+A L V+ + I LW + ++ L H V + ++ + G G I
Sbjct: 181 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 240
Query: 307 LHYDVRTHSDYPTAITR---------EGDVVCGLKWSPNGRYLASGSN-NTVKIWD 352
+D+ D G V + + S S+ +T+ IWD
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR---LQFDEFQIVSSSHDDTILIWD 293
Score = 51.8 bits (122), Expect = 7e-08
Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 16/178 (8%)
Query: 267 DLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD 326
D+ + L + L H V + ++ + + I ++ T T G
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE---FVRTLNGH 177
Query: 327 VVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKR-PLGLIVPKLKREGRELVTSHGKQD 384
R + SGS +NT+++WD R G G D
Sbjct: 178 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYD 237
Query: 385 CSLKMWEYPR---------LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
+K+W+ + L H R+ L D+ + ++S D+TI IW+
Sbjct: 238 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR--LQFDEFQIVSSSHDDTILIWD 293
Score = 48.3 bits (113), Expect = 7e-07
Identities = 16/117 (13%), Positives = 39/117 (33%), Gaps = 13/117 (11%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
+ + L+ G+ I +D+ + + + + N R ++ + +K
Sbjct: 184 LQYRDRLVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIK 241
Query: 61 IWDFRQLDAKRPQVNNQC------HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWN 111
+WD R C H V + ++ + + D T+ +W+
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ---FDEFQIVSSSH--DDTILIWD 293
Score = 34.8 bits (78), Expect = 0.020
Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 11/195 (5%)
Query: 244 ISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIG 303
+ C+ + + V+ I +W + + L H V+ + ++ ++ G+
Sbjct: 18 VYCLQYDDQ---KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSD 74
Query: 304 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLG 363
+ +DV T T I V+ + + ++ +WD
Sbjct: 75 STVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVT--CSKDRSIAVWDMASPTDITLRR 132
Query: 364 LIVPKLKREGRELVTSHGKQ----DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTC 419
++V D ++K+W + L H+ I A L
Sbjct: 133 VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRDRL 190
Query: 420 VAAASADETISIWNC 434
V + S+D TI +W+
Sbjct: 191 VVSGSSDNTIRLWDI 205
Score = 34.8 bits (78), Expect = 0.020
Identities = 16/119 (13%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
+ ++ + + I ++ T T G R + SGS +NT+
Sbjct: 144 VDFDDKYIVSASGDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 200
Query: 60 KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEK 118
++WD R ++ + ++ + + G D +++W+ + +
Sbjct: 201 RLWDIECGACLRVLEGHEEL------VRCIRFDNKRIVS--GAYDGKIKVWDLVAALDP 251
Score = 29.0 bits (63), Expect = 1.1
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 396 HLIEELKIHQERILSAV-LSPDQTCVAAASADETISIWN 433
H ++ + E L D + + D TI IW+
Sbjct: 3 HSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWD 41
Score = 28.7 bits (62), Expect = 1.6
Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 9/124 (7%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTV 59
+ +N ++ + +I +D+ + +D G + +Y+ S S + T+
Sbjct: 101 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI 160
Query: 60 KIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKC 119
K+W+ + R ++ IA + L+ +G D T+RLW+ G
Sbjct: 161 KVWNTSTCEFVRTLNGHKRG------IACLQYRDRLVVSG--SSDNTIRLWDIECGACLR 212
Query: 120 HVKT 123
++
Sbjct: 213 VLEG 216
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 56.3 bits (134), Expect = 3e-09
Identities = 30/326 (9%), Positives = 71/326 (21%), Gaps = 21/326 (6%)
Query: 41 GLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP-QVNNQCHLSAVKAIAWCPWEPTLLAT 98
G Y+ + N + + D + + + P T
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVD---VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVL 57
Query: 99 GGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYR--EQKKRRHLSFLLHGFEIDRK 156
+ + K H S Y + + ++ +
Sbjct: 58 NNH--YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 115
Query: 157 KVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVAL 216
+ + R + K R + L + Y +G D D
Sbjct: 116 HYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKY 175
Query: 217 DTSVYTWN-------TKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLW 269
++ N + P ++ + + +A T
Sbjct: 176 TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 235
Query: 270 HEQEERLIQKLRT-HMHQVIAMCWNGNLLSCGTIGGNILH-YDVRTHSDYPTAITREGDV 327
+ + + + + N L YD++
Sbjct: 236 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRK--LIKAANLDHT 293
Query: 328 VCGLKWSPNGRYLASGS-NNTVKIWD 352
+ + G L G N + +++
Sbjct: 294 YYCVAFDKKGDKLYLGGTFNDLAVFN 319
Score = 35.5 bits (80), Expect = 0.012
Identities = 7/65 (10%), Positives = 18/65 (27%), Gaps = 2/65 (3%)
Query: 293 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL--ASGSNNTVKI 350
+ N+ DV + + Y + + + +P+ R + +
Sbjct: 7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 351 WDFRQ 355
D
Sbjct: 67 IDLDT 71
Score = 33.9 bits (76), Expect = 0.035
Identities = 13/120 (10%), Positives = 25/120 (20%), Gaps = 20/120 (16%)
Query: 330 GLKWSPNGRYLASGS-NNTVKIWD---------FRQLDAKRPLGLIVPKLKREGRELVTS 379
G Y+ + N + + D D P ++ + R
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP---DNRTAYVL 57
Query: 380 HGKQDCSLKMWEYPRLHLI------EELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
+ + + S +SPD V A +
Sbjct: 58 -NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 116
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 56.4 bits (134), Expect = 3e-09
Identities = 32/345 (9%), Positives = 86/345 (24%), Gaps = 46/345 (13%)
Query: 44 WSP-NGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGI 102
+SP +G +A S I D + ++ + + + G
Sbjct: 10 FSPLDGDLIAFVSRGQAFIQDVSGTYVLKVP-----EPLRIRYVRRGG-DTKVAFIHGTR 63
Query: 103 CDQTVRLWNSMNGKEK---------------------CHVKTDSQQANDETISYREQKKR 141
+ +++ GK + + + + +
Sbjct: 64 EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 123
Query: 142 RHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYT 201
R ++ F I + + + + + +I A + + Y
Sbjct: 124 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYA 183
Query: 202 SGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTY----DNAYISCVAWKPRTTDLA 257
D + ++ + + + V + + PR+
Sbjct: 184 PAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 243
Query: 258 VTNTCTEYIDLWHEQ------EERLIQKLRTHMHQVIAMCWN--GNLLSCGTIGGNILHY 309
+ + R+I L + + G +L Y
Sbjct: 244 AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKY 303
Query: 310 DVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDF 353
DV+T +T + + L+ S + + + + + +
Sbjct: 304 DVKTRK-----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343
Score = 52.2 bits (123), Expect = 7e-08
Identities = 19/230 (8%), Positives = 42/230 (18%), Gaps = 21/230 (9%)
Query: 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280
+ ++ T + P E +
Sbjct: 117 GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 176
Query: 281 RTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRT------HSDYPTAITREGDVVCGLKWS 334
A + L + D P I K
Sbjct: 177 ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLV 236
Query: 335 PNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSH-----------GKQ 383
P +G + ++ P + + + +
Sbjct: 237 PRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPE 296
Query: 384 DCSLKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
L ++ ++ + + LS D+ V D I +
Sbjct: 297 KGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFP 342
Score = 38.3 bits (87), Expect = 0.002
Identities = 6/87 (6%), Positives = 20/87 (22%), Gaps = 11/87 (12%)
Query: 39 VCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLA 97
Y + +D + + + + + +
Sbjct: 279 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE-------VKNNLTDLRLSA-DRKTVM 330
Query: 98 TGGGICDQTVRLWNSMNGKEKCHVKTD 124
D + + +++ V+TD
Sbjct: 331 VRKD--DGKIYTFPLEKPEDERTVETD 355
Score = 30.2 bits (66), Expect = 0.54
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 333 WSP-NGRYLASGSNNTVKIWDFRQLDAKR---PLGLIVPKLKREGRELVTSHGKQDCSLK 388
+SP +G +A S I D + PL + + + + ++ L
Sbjct: 10 FSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLG 69
Query: 389 MW 390
++
Sbjct: 70 IY 71
Score = 29.8 bits (65), Expect = 0.81
Identities = 4/34 (11%), Positives = 13/34 (38%), Gaps = 3/34 (8%)
Query: 324 EGDVVCGLKWSPNGRYLASGSN---NTVKIWDFR 354
E + ++ + + + + I+D+R
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYR 74
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 55.4 bits (131), Expect = 4e-09
Identities = 42/286 (14%), Positives = 90/286 (31%), Gaps = 24/286 (8%)
Query: 79 HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQ 138
H + A+ P L +G D + W+S + + S S ++
Sbjct: 12 HNKGITALTVNP-----LISGS--YDGRIMEWSSSSMHQD-----HSNLIVSLDNSKAQE 59
Query: 139 KKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIIND 198
L I + + +Q K + + + + +
Sbjct: 60 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119
Query: 199 FYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAV 258
+ +AV L+ K + ++ + T A S ++ P T +A
Sbjct: 120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 179
Query: 259 TNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW------------NGNLLSCGTIGGNI 306
+ + + + E + ++ A+ W +L++ G++ NI
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239
Query: 307 LHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWD 352
Y V+ A+ D V L W ++SG++ +K W+
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWN 285
Score = 44.2 bits (102), Expect = 2e-05
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKI 61
+L++ G++ NI Y V+ A+ D V L W ++SG++ +K
Sbjct: 224 EIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKR 283
Query: 62 WD 63
W+
Sbjct: 284 WN 285
Score = 35.3 bits (79), Expect = 0.011
Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 381 GKQDCSLKMWEYPR-LHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
G D ++ ++ R + +I+ L H++ + + + T + ++ AD I WN
Sbjct: 233 GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285
Score = 27.2 bits (58), Expect = 4.7
Identities = 7/37 (18%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 397 LIEELKIHQERILSAVLSPDQTCVAAASADETISIWN 433
+++ + H + I + ++P + + S D I W+
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWS 37
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 47.1 bits (111), Expect = 3e-06
Identities = 29/280 (10%), Positives = 66/280 (23%), Gaps = 29/280 (10%)
Query: 210 DTLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAY--ISCVAWKPRTTDLAVTNTCTEYI 266
L V D V + + + E A +
Sbjct: 74 RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133
Query: 267 DLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIG--------------GNILHYDVR 312
+ + + T ++ + G IL D
Sbjct: 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 193
Query: 313 THSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKI----WDFRQLDAKRPLGLIVPK 368
++ T + + RY + +N K+ +L A G P
Sbjct: 194 DLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPH 253
Query: 369 LKREGRELVTSHGKQDCSLKMWEYPRLHLI----EELKIHQERILSAVLSPDQTCVAAAS 424
R + + G + M + + LI E + +IL + + + +
Sbjct: 254 PGRGANFVHPTFGPVWATSHMGD-DSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKT 312
Query: 425 ADETISIWNCFPRDKKRKARQ---VGSGSSLEFAILKQPV 461
+ ++ + + + V ++
Sbjct: 313 HPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEF 352
Score = 35.5 bits (81), Expect = 0.011
Identities = 17/123 (13%), Positives = 32/123 (26%), Gaps = 7/123 (5%)
Query: 15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPQ 73
G I D T+ + G V + S +GRYL V + D +
Sbjct: 42 GQIALIDGSTYE--IKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 74 VNNQC--HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDE 131
S + + +A + + + K T +++
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYDEQ 157
Query: 132 TIS 134
Sbjct: 158 EYH 160
Score = 34.4 bits (78), Expect = 0.026
Identities = 21/148 (14%), Positives = 36/148 (24%), Gaps = 15/148 (10%)
Query: 304 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSN-NTVKIWDFRQLDAKRPL 362
G I D T+ + G V + S +GRYL V + D +
Sbjct: 42 GQIALIDGSTYE--IKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 363 GLIV----------PKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV 412
+ + E + + + + L +
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAY-WPPQYVIMDGETLEPKKIQSTRGMTYDEQE 158
Query: 413 LSPD-QTCVAAASADETISIWNCFPRDK 439
P+ + AS I N K
Sbjct: 159 YHPEPRVAAILASHYRPEFIVNVKETGK 186
Score = 33.6 bits (76), Expect = 0.057
Identities = 17/110 (15%), Positives = 30/110 (27%), Gaps = 6/110 (5%)
Query: 15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKI----WDFRQLDAK 70
G IL D ++ T + + RY + +N K+ +L A
Sbjct: 185 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI 244
Query: 71 RPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
H + P + G D +V L + +
Sbjct: 245 EDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDPEGHPDN 292
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 44.4 bits (103), Expect = 2e-05
Identities = 32/353 (9%), Positives = 86/353 (24%), Gaps = 53/353 (15%)
Query: 6 NLLSCGTIGGNILHYDVRTHSDYPT-AITREGDVVCGLKWSPNGRYL--ASGSNNTVKIW 62
+ + ++ D + I G +P GR + ++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 63 DFR--QLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
D + + + + ++ A P TL I + VRL + +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLA-----IYESPVRLELTHFEVQPTR 116
Query: 121 VKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPR 180
V + ++ ++ L++
Sbjct: 117 VALYDAETLSRRKAFEAPRQITMLAW---------------------------------- 142
Query: 181 KVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD 240
A+ L D + + G + + + + + ++ +
Sbjct: 143 ---ARDGSKLYGLG--RDLHVMDPEAGTL-VEDKPIQSWEAETYAQPDVLAVWNQHESSG 196
Query: 241 NAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCG 300
+ T T + + E E ++++R + N
Sbjct: 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAF 256
Query: 301 TIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWD 352
+ +D+ ++ + S +G + G + +D
Sbjct: 257 GAYNVLESFDLEKNA--SIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYD 307
Score = 42.5 bits (98), Expect = 8e-05
Identities = 23/245 (9%), Positives = 57/245 (23%), Gaps = 19/245 (7%)
Query: 207 GYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYI 266
L + T + L I+ +AW + L ++
Sbjct: 100 ESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG-RDLHV 158
Query: 267 DLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD 326
+ +++ + A + + G + D A
Sbjct: 159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218
Query: 327 VVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCS 386
G + ++ +
Sbjct: 219 TGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR-----------------AFGAYNV 261
Query: 387 LKMWEYPRLHLIEELKIHQERILSAVLSPDQTCVAAASADETISIWNCFPRDKKRKARQV 446
L+ ++ + I+ + S +S D + V A ++ ++ +KK +
Sbjct: 262 LESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320
Query: 447 GSGSS 451
G+ S
Sbjct: 321 GNASM 325
Score = 33.6 bits (75), Expect = 0.040
Identities = 10/126 (7%), Positives = 33/126 (26%), Gaps = 8/126 (6%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
+ + +L D+ T + +P N ++
Sbjct: 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNV-LE 263
Query: 61 IWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCH 120
+D + + + ++ + + + GG + +++ ++K
Sbjct: 264 SFDLEKNA----SIKRVPLPHSYYSVNVST-DGSTVWLGGA--LGDLAAYDAETLEKKGQ 316
Query: 121 VKTDSQ 126
V
Sbjct: 317 VDLPGN 322
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 44.0 bits (102), Expect = 3e-05
Identities = 32/330 (9%), Positives = 70/330 (21%), Gaps = 69/330 (20%)
Query: 41 GLKWSPNGRYLASGSN-----------NTVKIWDFRQLDAKRPQVNNQCHLSAV----KA 85
+ +G ++A S + V+++D L V
Sbjct: 51 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWM 110
Query: 86 IAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLS 145
+ P TLL V + + K +
Sbjct: 111 TSLTPDGKTLLFYQFS-PAPAVGVVDLEGKAFKRMLDVPDC------YHIFPTAPDTFFM 163
Query: 146 FLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLD 205
G + P + + I + Y+
Sbjct: 164 HCRDGSLA----------------KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 207
Query: 206 WGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEY 265
T ++ + + + L A + +A
Sbjct: 208 RLVWPT----YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH------ 257
Query: 266 IDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREG 325
+ ++ + + T ++ D +T A G
Sbjct: 258 ----------------RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--RLAKFEMG 299
Query: 326 DVVCGLKWSPNGRYL---ASGSNNTVKIWD 352
+ + S + + L S + T+ I D
Sbjct: 300 HEIDSINVSQDEKPLLYALSTGDKTLYIHD 329
Score = 37.8 bits (86), Expect = 0.002
Identities = 29/284 (10%), Positives = 60/284 (21%), Gaps = 42/284 (14%)
Query: 205 DWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNA----YISCVAWKPRTTDLAVTN 260
+ V ++ T +E P Y + P L
Sbjct: 65 STVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124
Query: 261 TCTEYIDLWHEQEE-RLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNIL----HYDVRTHS 315
+ E + L I G +
Sbjct: 125 FSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 184
Query: 316 DYPTAITREGDVVCGLKWSPNGRYLASGSNN----------------------------T 347
+ ++ +S L +
Sbjct: 185 HTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD 244
Query: 348 VKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLHLIEELKIHQER 407
Q A + L + E + + + + + +
Sbjct: 245 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA--SRFVVVLDAKTGERLAKFE-MGHE 301
Query: 408 ILSAVLSPDQTC--VAAASADETISIWNCFPRDKKRKARQVGSG 449
I S +S D+ A ++ D+T+ I + ++ R Q+G G
Sbjct: 302 IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG 345
Score = 34.4 bits (77), Expect = 0.024
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Query: 2 CWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL---ASGSNNT 58
+ T ++ D +T A G + + S + + L S + T
Sbjct: 267 VDQRDEWRHKTASRFVVVLDAKTGE--RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKT 324
Query: 59 VKIWD 63
+ I D
Sbjct: 325 LYIHD 329
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 43.3 bits (100), Expect = 4e-05
Identities = 28/312 (8%), Positives = 67/312 (21%), Gaps = 21/312 (6%)
Query: 50 YLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL 109
Y+AS + + +W+ + V+ + P + L + V
Sbjct: 7 YIASPESQQIHVWNLNH-EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP--EFRVLA 63
Query: 110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT 169
+ +S T H+S G + +
Sbjct: 64 YRIAPDDGALTFAAESALPGSLT----------HISTDHQGQFVFVGSYNAGNVSVTRLE 113
Query: 170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYH------DTLAVALDTSVYTW 223
L + +P + + D VA D + T
Sbjct: 114 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 173
Query: 224 NTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTH 283
++ ++ + +L + E + E
Sbjct: 174 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 233
Query: 284 MHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL--A 341
+ + + G +G+YL A
Sbjct: 234 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAA 293
Query: 342 SGSNNTVKIWDF 353
++ + +++
Sbjct: 294 GQKSHHISVYEI 305
Score = 32.5 bits (72), Expect = 0.092
Identities = 22/231 (9%), Positives = 46/231 (19%), Gaps = 4/231 (1%)
Query: 36 GDVVCGLKWSPNGRYLASGSN--NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEP 93
V + SP+ RYL G V + D ++ I+
Sbjct: 36 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQ 95
Query: 94 TLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEI 153
+ + +V V + IS +
Sbjct: 96 FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLF 155
Query: 154 DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLA 213
+ P + G PR + P + +
Sbjct: 156 TVSD--DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 213
Query: 214 VALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTE 264
+ T ++ + T D ++ + +
Sbjct: 214 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGS 264
Score = 28.6 bits (62), Expect = 1.8
Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITRE--GDVVCGLKWSPNGRYL--ASGSN 56
+L +C I + V + + G +G+YL A +
Sbjct: 238 TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKS 297
Query: 57 NTVKIWDF 64
+ + +++
Sbjct: 298 HHISVYEI 305
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 41.5 bits (96), Expect = 2e-04
Identities = 36/283 (12%), Positives = 71/283 (25%), Gaps = 41/283 (14%)
Query: 211 TLAVA-LDTSVYTWNTKTNKTQLLVEYPTYDNAY--ISCVAWKPRTTDLAVTNTCTEYID 267
L V D + + + + E A S
Sbjct: 75 YLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFA 134
Query: 268 LWHEQEERLIQKLRTHMHQV-------------IAMCWNGNLLSCGTIG-GNILHYDVRT 313
+ + Q + T V I G +L + +
Sbjct: 135 IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 194
Query: 314 HSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREG 373
+ + W + RY + +NN+ K+ D + + V K G
Sbjct: 195 IDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG 254
Query: 374 REL-----------VTSHGKQDCSLKMWEYPRLH------LIEELKIHQERILSAVLSPD 416
R TSH + P+ H + EL+ L P
Sbjct: 255 RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK 314
Query: 417 QTCVAA-------ASADETISIWNCFPRDKKRKARQVGSGSSL 452
+ + A +++++++ D K + + + L
Sbjct: 315 SSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADL 357
Score = 34.9 bits (79), Expect = 0.017
Identities = 43/398 (10%), Positives = 94/398 (23%), Gaps = 52/398 (13%)
Query: 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGS-NNTVKIWDFRQLDAKRP 72
G I D + + G V + S +GRYL + + + D + +
Sbjct: 41 AGQIALVDGDSKK--IVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 98
Query: 73 QVNNQC--HLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQAND 130
S + + +A + + + K V T +
Sbjct: 99 AEIKIGIEARSVESSKFKGYEDRYTIAG--AYWPPQFAIMDGETLEPKQIVSTRGMTVDT 156
Query: 131 ETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERIL 190
+T R H + + + K T L
Sbjct: 157 QTYHPE---PRVAAIIASH----EHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFL 209
Query: 191 EAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNT-KTNKTQLLVEYPTYDNAYISCVAW 249
+ + +AV KT + + V
Sbjct: 210 ADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWS 269
Query: 250 KPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGN---------LLSCG 300
D +++ T + + + +L+ + + +
Sbjct: 270 TSHLGDGSISLIGT-DPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDA 328
Query: 301 TIGGNILHYDVRTHSDYPT--------AITREGDVVCGLKWSPNGRYL------ASGSNN 346
I ++ +D++ + V +++ G + ++
Sbjct: 329 RISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSS 388
Query: 347 TVKIWDFRQLDAKRPLGLIVPKLKRE--GRELVTSHGK 382
+ + D D KLK L+T GK
Sbjct: 389 ALVVVD----DKTL-------KLKAVVKDPRLITPTGK 415
Score = 29.2 bits (64), Expect = 1.4
Identities = 7/96 (7%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Query: 357 DAKRPLGLIVPKLKREGRELVTSHGKQ--------DCSLKMWEYPRLHLIEELKIHQERI 408
+ + ++V R ++L + + + +++ + +
Sbjct: 6 EMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAV 64
Query: 409 LSAVLSPDQTCVAAASADETISIWNCFPRDKKRKAR 444
+ +S + D I + + + ++ + A
Sbjct: 65 HISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 100
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 39.5 bits (90), Expect = 6e-04
Identities = 29/305 (9%), Positives = 66/305 (21%), Gaps = 39/305 (12%)
Query: 50 YLASGSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRL 109
Y+A+ ++ + + D S P + V +
Sbjct: 5 YIANSESDNISVIDV----TSNKVTATIPVGSNPMGAVISPDGTKVYVANAH--SNDVSI 58
Query: 110 WNSMNGKEKCHVKTDSQQANDETISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPT 169
++ V S +Q +++ + + +T
Sbjct: 59 IDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSP 118
Query: 170 QFLRTLGKLPRKVKAKPERILEAPSIINDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNK 229
L L V + T
Sbjct: 119 LGLA-------------------------------LSPDGKKLYVTNNGDKTVSVINTVT 147
Query: 230 TQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIA 289
++ + V +A ++ + + K+ +
Sbjct: 148 KAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV 207
Query: 290 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL--ASGSNNT 347
+ T ++ TA G G+ +P+G+ + A NT
Sbjct: 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNT 267
Query: 348 VKIWD 352
V + D
Sbjct: 268 VSVID 272
Score = 32.5 bits (72), Expect = 0.11
Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL--ASGSNNT 58
+ T ++ TA G G+ +P+G+ + A NT
Sbjct: 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNT 267
Query: 59 VKIWD 63
V + D
Sbjct: 268 VSVID 272
Score = 32.2 bits (71), Expect = 0.13
Identities = 30/281 (10%), Positives = 68/281 (24%), Gaps = 13/281 (4%)
Query: 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYL--ASGSNNTVKIWDFRQLDAKR 71
NI DV ++ TA G G SP+G + A+ +N V I D +
Sbjct: 11 SDNISVIDVTSNK--VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA 68
Query: 72 PQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDE 131
+ T +A+ T + K + + +
Sbjct: 69 TVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGK 128
Query: 132 TISYREQKKRRHLSFLLHGFEIDRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILE 191
+ + + + +S + ++ T + +
Sbjct: 129 KLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTV 188
Query: 192 APSIINDFYTSG-------LDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYI 244
S+I+ G + T ++ P +
Sbjct: 189 TNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPA- 247
Query: 245 SCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMH 285
+A P + V + + + + + +
Sbjct: 248 -GIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKN 287
Score = 32.2 bits (71), Expect = 0.14
Identities = 17/223 (7%), Positives = 46/223 (20%), Gaps = 9/223 (4%)
Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERL 276
V +T TN ++ ++ + +
Sbjct: 53 SNDVSIIDTATNN---VIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA 109
Query: 277 IQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPN 336
+A+ +G L G + ++
Sbjct: 110 GTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDG 169
Query: 337 GRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELVTSHGKQDCSLKMWEYPRLH 396
+ + ++ ++ + + K + +
Sbjct: 170 TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229
Query: 397 LIEELKI-----HQERILSAVLSPD-QTCVAAASADETISIWN 433
KI ++PD + A S T+S+ +
Sbjct: 230 DTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVID 272
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 39.6 bits (91), Expect = 6e-04
Identities = 27/338 (7%), Positives = 69/338 (20%), Gaps = 67/338 (19%)
Query: 33 TREGDVVCGLKWSPNGRYLASGSN-----------NTVKIWDFRQLDAKRPQVNNQCHLS 81
+G G +P+ + + + V+I D LD V H
Sbjct: 13 QIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQ 72
Query: 82 AVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDSQQANDETISYREQKKR 141
V + + + +K S+ +
Sbjct: 73 HVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKML----SEIDTAACVLAYPAGDD 128
Query: 142 RHLSFLLHGFEI-----DRKKVLNQSKRTVSPTQFLRTLGKLPRKVKAKPERILEAPSII 196
R + G + K ++ + K
Sbjct: 129 RFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGD----------- 177
Query: 197 NDFYTSGLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDL 256
L +V + + +K + +A + W+P
Sbjct: 178 --------------YLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERA-EGWRPGGMQQ 222
Query: 257 AVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSD 316
+ + K + +
Sbjct: 223 TAVQAKQNRYYVLMHKGTDGSHKDP-----------GTQVWVYDLKSKQRVARWDLAQ-- 269
Query: 317 YPTAITREGDVVCGLKWSPNGRYL--ASGSNNTVKIWD 352
++ + + ++ S + + L + + + + D
Sbjct: 270 ------QKVEPLVSIQVSEDDKPLFYGLTATSDLVVMD 301
Score = 31.5 bits (70), Expect = 0.19
Identities = 12/134 (8%), Positives = 34/134 (25%), Gaps = 24/134 (17%)
Query: 322 TREGDVVCGLKWSPNGRYLASGSN-----------NTVKIWDFRQLDAKRPLGLIVPKLK 370
+G G +P+ + + + V+I D LD + + +
Sbjct: 13 QIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQ 72
Query: 371 REGRELVTSHGKQ---------DCSLKMWEYPRLHLIEELKIHQERILSAVLSPD--QTC 419
T+ + + + +I + + P
Sbjct: 73 HVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEI--DTAACVLAYPAGDDRF 130
Query: 420 VAAASADETISIWN 433
A + + +++
Sbjct: 131 TALCESGKALTVTL 144
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 38.4 bits (88), Expect = 0.001
Identities = 15/150 (10%), Positives = 34/150 (22%), Gaps = 14/150 (9%)
Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWH----EQ 272
T A + + + + + +
Sbjct: 194 AAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNE 253
Query: 273 EERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYD-------VRTHSDYPTAITREG 325
R R+ Q++A N + + T+ + V + G
Sbjct: 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG 313
Query: 326 DVVCGLKWSPNGR---YLASGSNNTVKIWD 352
+ + +G Y S + I+D
Sbjct: 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYD 343
Score = 32.3 bits (72), Expect = 0.14
Identities = 7/53 (13%), Positives = 13/53 (24%), Gaps = 5/53 (9%)
Query: 14 GGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGR---YLASGSNNTVKIWD 63
N + G + + +G Y S + I+D
Sbjct: 293 AENTSSVTASVGQ--TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343
Score = 29.6 bits (65), Expect = 0.91
Identities = 9/107 (8%), Positives = 28/107 (26%), Gaps = 9/107 (8%)
Query: 20 YDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPQVNNQCH 79
+ R+ A + D + + + + +
Sbjct: 259 DNFRSAGFQMVAKLKNTDGIMI--LTVEHSRSCLAAAENTSSVTA----SVGQTSGPISN 312
Query: 80 LSAVKAIAWCPW-EPTLLATGGGICDQTVRLWNSMNGKEKCHVKTDS 125
AI A G + + ++++ + +++ V+ D
Sbjct: 313 GHDSDAIIAAQDGASDNYANSAG--TEVLDIYDAASDQDQSSVELDK 357
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 34.4 bits (77), Expect = 0.023
Identities = 10/90 (11%), Positives = 21/90 (23%), Gaps = 1/90 (1%)
Query: 263 TEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAIT 322
T + + H + + I G Y T
Sbjct: 171 TRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHT 230
Query: 323 REGDVVCGLKWSPNGRYLASGSNNTVKIWD 352
D + +GR + ++ I++
Sbjct: 231 SFTDYY-PRHLNTDGRRILFSKGGSIYIFN 259
Score = 30.5 bits (67), Expect = 0.36
Identities = 8/63 (12%), Positives = 17/63 (26%), Gaps = 1/63 (1%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVK 60
+ + I G Y T D + +GR + ++
Sbjct: 198 VIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYY-PRHLNTDGRRILFSKGGSIY 256
Query: 61 IWD 63
I++
Sbjct: 257 IFN 259
Score = 30.1 bits (66), Expect = 0.56
Identities = 15/126 (11%), Positives = 42/126 (33%), Gaps = 12/126 (9%)
Query: 15 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA-----SGSNNTVKIWDFRQLDA 69
++ +D+++ S I V+ ++ P+GR +A S NT ++ + +
Sbjct: 21 DDLWEHDLKSGS--TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG 78
Query: 70 KRPQV-----NNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKTD 124
+ ++ + + P +++T ++ + V +
Sbjct: 79 EIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLN 138
Query: 125 SQQAND 130
A
Sbjct: 139 LGPATH 144
Score = 27.0 bits (58), Expect = 5.5
Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 304 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDF 353
++ +D+++ S I V+ ++ P+GR +A +
Sbjct: 21 DDLWEHDLKSGS--TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTA 68
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 33.1 bits (74), Expect = 0.060
Identities = 13/130 (10%), Positives = 33/130 (25%), Gaps = 14/130 (10%)
Query: 236 YPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGN 295
I + + ++ +IA N
Sbjct: 163 VVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNF 222
Query: 296 LLSCGTIGGNIL-HYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR 354
L+ T G ++ + + + +G + + + + I+ +
Sbjct: 223 NLTIFTQDGQLISALESKVKHAQC----------FDVALMDDGSVVLASKDYRLYIYRYV 272
Query: 355 QLDAKRPLGL 364
QL P+G+
Sbjct: 273 QLA---PVGM 279
Score = 30.4 bits (67), Expect = 0.45
Identities = 4/33 (12%), Positives = 13/33 (39%)
Query: 35 EGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQL 67
+ + +G + + + + I+ + QL
Sbjct: 242 KHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL 274
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 31.8 bits (72), Expect = 0.21
Identities = 18/127 (14%), Positives = 33/127 (25%), Gaps = 22/127 (17%)
Query: 325 GDVVCGLKWSPNGRYLASGSNNTVKIWD-------FRQLDAKRPLGLIVPKLKREGRELV 377
+V G + G + + K P GL +G+ +
Sbjct: 217 FNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNT---SPDGKYFI 273
Query: 378 TSHGKQDCSLKMWEYPRLHLIEELKIHQERILSAV-----------LSPDQTCVAAASAD 426
+ GK ++ + +L + E KI + A D
Sbjct: 274 AN-GKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFID 332
Query: 427 ETISIWN 433
+ WN
Sbjct: 333 SQVCKWN 339
Score = 26.8 bits (59), Expect = 6.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 12 TIGGN-ILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRY-LASGS-NNTVKIWDFRQLD 68
TIG + + D R S++ T GL SP+G+Y +A+G + TV + +LD
Sbjct: 233 TIGDSKVPVVDGRGESEF-TRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLD 291
Query: 69 A 69
Sbjct: 292 D 292
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 30.6 bits (67), Expect = 0.39
Identities = 14/139 (10%), Positives = 36/139 (25%), Gaps = 7/139 (5%)
Query: 221 YTWNTKTNKTQLLVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKL 280
+ + T + + W P + +LA T+ ++ +
Sbjct: 106 SLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR 165
Query: 281 RTHMHQVIAMC---WNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNG 337
T +G + + G H + + + + +PNG
Sbjct: 166 ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNG 225
Query: 338 RYLA----SGSNNTVKIWD 352
+ G + + +
Sbjct: 226 TMVIYSSSQGMGSVLNLVS 244
Score = 27.5 bits (59), Expect = 3.1
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 8/94 (8%)
Query: 1 MCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLA----SGSN 56
+ +G + + G H + + + + +PNG + G
Sbjct: 178 VSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMG 237
Query: 57 NTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCP 90
+ + + D + VK AW P
Sbjct: 238 SVLNLVS---TDGRFKARLPA-TDGQVKFPAWSP 267
Score = 26.7 bits (57), Expect = 5.8
Identities = 11/79 (13%), Positives = 22/79 (27%)
Query: 318 PTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLGLIVPKLKREGRELV 377
+ R + WSP+G LA + + + Q A + + + G
Sbjct: 31 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF 90
Query: 378 TSHGKQDCSLKMWEYPRLH 396
+ G +
Sbjct: 91 SPDGSKLAFALSKTGSLNL 109
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 29.3 bits (64), Expect = 1.2
Identities = 15/123 (12%), Positives = 34/123 (27%), Gaps = 14/123 (11%)
Query: 14 GGNILHYDVRTHSD----YPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIW------D 63
NIL ++ + + G + SP+G+++ N VK W
Sbjct: 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY-NYVKQWRHSYTAS 93
Query: 64 FRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTLLATGGGICDQTVRLWNSMNGKEKCHVKT 123
+ D + Q+ + + + + + + N T
Sbjct: 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVGH---KLAYVWNNDIYVKIEPNLPSYRITWT 150
Query: 124 DSQ 126
+
Sbjct: 151 GKE 153
Score = 28.5 bits (62), Expect = 1.9
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Query: 303 GGNILHYDVRTHSD----YPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDF 353
NIL ++ + + G + SP+G+++ N VK W
Sbjct: 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY-NYVKQWRH 88
Score = 28.2 bits (61), Expect = 2.7
Identities = 22/179 (12%), Positives = 44/179 (24%), Gaps = 27/179 (15%)
Query: 203 GLDWGYHDTLAVALDTSVYTWNTKTNKTQLLVEYPTYD--NAYISCVAWKP--------- 251
L W + ++ +N + + + +E T+D I+ + P
Sbjct: 21 SLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY 80
Query: 252 ---------RTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTI 302
T + + + + + +A WN ++
Sbjct: 81 NYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP 140
Query: 303 GGNILHYDVRTHSDYPTAIT-------REGDVVCGLKWSPNGRYLASGSNNTVKIWDFR 354
D L WSPNG +LA N ++
Sbjct: 141 NLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIE 199
>d1tnsa_ a.6.1.7 (A:) mu transposase, DNA-binding domain
{Bacteriophage mu [TaxId: 10677]}
Length = 76
Score = 26.7 bits (59), Expect = 1.5
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 438 DKKRKARQVGSGSSLEFAILKQPVSLTALLRSRAVEKQQHAIAY 481
+ R V G ++E+ PV A L R E + ++ Y
Sbjct: 32 WQNRTRAGVKGGKAIEYNANSLPVEAKAALLLRQGE-IETSLGY 74
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 28.5 bits (63), Expect = 2.0
Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 304 GNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFRQLDAKRPLG 363
G IL D+ + + G+ + ++P+G +NTV + + +
Sbjct: 68 GKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVE 127
Query: 364 LIVPKLKREGRELVTSHGKQD 384
+ K + E + L+ +
Sbjct: 128 VF--KFQEEEKSLLHLKTIRH 146
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta
subunit HrcB, N-terminal domain {Thauera aromatica
[TaxId: 59405]}
Length = 216
Score = 27.7 bits (61), Expect = 2.5
Identities = 12/73 (16%), Positives = 17/73 (23%), Gaps = 9/73 (12%)
Query: 257 AVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSD 316
T D L Q + T+GGN+ R
Sbjct: 75 GATLEAIAEHDAIRTTWPALAQAAESVAGPTH---RA-----AATLGGNLCQDT-RCTFY 125
Query: 317 YPTAITREGDVVC 329
+ R G+ C
Sbjct: 126 NQSEWWRSGNGYC 138
>d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain
{Chicken (Gallus gallus) [TaxId: 9031]}
Length = 123
Score = 26.8 bits (59), Expect = 2.9
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 38 VVCGLKWSPNGRYLAS--GSNNTVKIWDFRQLDAKRPQVNNQCHLSAVKAIAWCPWEPTL 95
V G WS GR + S + + W +L +A AW WE T+
Sbjct: 23 TVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGD--------KAPPGRAWAWALWELTV 74
Query: 96 LATGGGICDQTVRLWNS 112
G + + +S
Sbjct: 75 PVEAGTELEIVCKAVDS 91
>d2ffga1 d.317.1.1 (A:2-79) Hypothetical protein YkuJ {Bacillus
subtilis [TaxId: 1423]}
Length = 78
Score = 25.9 bits (57), Expect = 3.4
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 114 NGKEKCHVKTDSQQANDETISYREQKKRRHLSF 146
NG++ C VK + E +++ +K F
Sbjct: 31 NGEKICSVKYFEKNQTFELTVFQKGEKPNTYPF 63
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 27.6 bits (60), Expect = 3.9
Identities = 23/169 (13%), Positives = 45/169 (26%), Gaps = 28/169 (16%)
Query: 217 DTSVYTWNTKTNKTQLLVEYPTYDNAYISCVAWKP-RTTDLAVTNTCTEY---------I 266
+V WN +TN + +L+E ++ P R L N Y +
Sbjct: 36 KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95
Query: 267 DLWHEQEERLIQKLRTHMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPTAITREGD 326
+ + + ++ W I N ++Y ++ +
Sbjct: 96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKE 155
Query: 327 ------------------VVCGLKWSPNGRYLASGSNNTVKIWDFRQLD 357
WSP+G LA + N ++
Sbjct: 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPT 204
>d1tx2a_ c.1.21.1 (A:) Dihydropteroate synthetase {Bacillus
anthracis [TaxId: 1392]}
Length = 273
Score = 26.3 bits (57), Expect = 7.9
Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 7/132 (5%)
Query: 235 EYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCWNG 294
IS +K A+ D+W + E I ++ H I + N
Sbjct: 88 AVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNR 147
Query: 295 NLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWSPNGRYLASGSNNTVKIWDFR 354
+ ++ + +++ + A R+ +++ + R
Sbjct: 148 DNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGF-------AKTPEQNLEAMR 200
Query: 355 QLDAKRPLGLIV 366
L+ LG V
Sbjct: 201 NLEQLNVLGYPV 212
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli
[TaxId: 562]}
Length = 282
Score = 26.3 bits (57), Expect = 8.3
Identities = 14/102 (13%), Positives = 24/102 (23%), Gaps = 3/102 (2%)
Query: 233 LVEYPTYDNAYISCVAWKPRTTDLAVTNTCTEYIDLWHEQEERLIQKLRTHMHQVIAMCW 292
+ +IS KP + D+ E ++ V M
Sbjct: 82 VEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHM 141
Query: 293 NGNLLSCGTIGGNILHYDVRTHSDYPTAITREGDVVCGLKWS 334
GN T+ + DV + G+
Sbjct: 142 QGNP---KTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKE 180
>d1fmd1_ b.121.4.1 (1:) Aphthovirus (Foot-and-mouth disease virus)
coat proteins {FMDV (Foot-and-mouth disease virus),
strain bfs, 1860 [TaxId: 12110]}
Length = 207
Score = 25.9 bits (57), Expect = 9.8
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 282 THMHQVIAMCWNGNLLSCGTIGGNILHYDVRTHSDYPT 319
T H+V+A + G + G++ H + PT
Sbjct: 120 TAPHRVLATAYTGTTTYTASARGDLAHLTTTHAAHLPT 157
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.133 0.422
Gapped
Lambda K H
0.267 0.0562 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,872,898
Number of extensions: 86248
Number of successful extensions: 584
Number of sequences better than 10.0: 1
Number of HSP's gapped: 403
Number of HSP's successfully gapped: 193
Length of query: 488
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 399
Effective length of database: 1,185,626
Effective search space: 473064774
Effective search space used: 473064774
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.3 bits)