Your job contains 1 sequence.
>psy14513
MTSKQNSGSRQDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKL
TFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYV
AKRQRTDPELNYNLHCSQPVKFSNVHLLSNPLLSHISGECVKGALVISQLSTQFYKLYPL
LFIMTLLLITLVVYLICMSYKYARNHVPY
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14513
(209 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A1KZ92 - symbol:PXDNL "Peroxidasin-like protein... 158 5.0e-10 1
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 158 5.2e-10 1
UNIPROTKB|F1RR92 - symbol:SLIT3 "Uncharacterized protein"... 155 9.4e-10 1
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 154 1.4e-09 1
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 154 1.4e-09 1
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 154 1.4e-09 1
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 154 1.4e-09 1
UNIPROTKB|Q6UXK5 - symbol:LRRN1 "Leucine-rich repeat neur... 150 1.4e-09 1
UNIPROTKB|F1PKU2 - symbol:PXDNL "Uncharacterized protein"... 152 2.1e-09 1
UNIPROTKB|P22792 - symbol:CPN2 "Carboxypeptidase N subuni... 145 3.3e-09 1
UNIPROTKB|Q8N7C0 - symbol:LRRC52 "Leucine-rich repeat-con... 140 4.0e-09 1
UNIPROTKB|F1P2C4 - symbol:LRRC4C "Uncharacterized protein... 142 4.6e-09 1
UNIPROTKB|F1Q3G2 - symbol:SLIT3 "Uncharacterized protein"... 148 5.1e-09 1
UNIPROTKB|J9NZ68 - symbol:SLIT2 "Uncharacterized protein"... 148 5.2e-09 1
UNIPROTKB|Q90Z43 - symbol:SLIT3 "Slit3 protein" species:9... 145 5.7e-09 1
MGI|MGI:1315205 - symbol:Slit2 "slit homolog 2 (Drosophil... 148 6.1e-09 1
UNIPROTKB|O94813 - symbol:SLIT2 "Slit homolog 2 protein" ... 148 6.1e-09 1
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 148 6.1e-09 1
ZFIN|ZDB-GENE-050320-95 - symbol:islr2 "immunoglobulin su... 144 6.3e-09 1
UNIPROTKB|F1S5C4 - symbol:SLIT2 "Uncharacterized protein"... 146 6.3e-09 1
UNIPROTKB|F1NTY3 - symbol:LRRC4C "Uncharacterized protein... 142 7.0e-09 1
ZFIN|ZDB-GENE-061026-3 - symbol:nyx "nyctalopin" species:... 141 7.0e-09 1
UNIPROTKB|F1NL15 - symbol:SLIT3 "Uncharacterized protein"... 145 8.6e-09 1
UNIPROTKB|F1MLJ7 - symbol:SLIT2 "Uncharacterized protein"... 146 1.0e-08 1
RGD|71066 - symbol:Lrrn3 "leucine rich repeat neuronal 3"... 142 1.0e-08 1
UNIPROTKB|Q9H3W5 - symbol:LRRN3 "Leucine-rich repeat neur... 142 1.0e-08 1
UNIPROTKB|F1NF14 - symbol:SLIT3 "Uncharacterized protein"... 145 1.1e-08 1
MGI|MGI:106036 - symbol:Lrrn3 "leucine rich repeat protei... 141 1.3e-08 1
ZFIN|ZDB-GENE-060217-1 - symbol:lgi1b "leucine-rich, glio... 139 1.5e-08 1
UNIPROTKB|F1Q057 - symbol:PXDN "Uncharacterized protein" ... 144 1.5e-08 1
UNIPROTKB|F1NR94 - symbol:SLIT2 "Uncharacterized protein"... 140 1.5e-08 1
UNIPROTKB|A0N0X6 - symbol:LRRN1 "Leucine-rich repeat neur... 140 1.7e-08 1
MGI|MGI:106038 - symbol:Lrrn1 "leucine rich repeat protei... 140 1.7e-08 1
RGD|1564145 - symbol:Lrrn1 "leucine rich repeat neuronal ... 140 1.7e-08 1
ZFIN|ZDB-GENE-071126-1 - symbol:lrrn1 "leucine rich repea... 140 1.7e-08 1
UNIPROTKB|E2REC5 - symbol:LRRC4C "Uncharacterized protein... 139 1.9e-08 1
UNIPROTKB|F1MXH5 - symbol:LRRC4C "Uncharacterized protein... 139 1.9e-08 1
UNIPROTKB|Q9HCJ2 - symbol:LRRC4C "Leucine-rich repeat-con... 139 1.9e-08 1
UNIPROTKB|F1SHH6 - symbol:LRRC4C "Uncharacterized protein... 139 1.9e-08 1
MGI|MGI:2442636 - symbol:Lrrc4c "leucine rich repeat cont... 139 1.9e-08 1
RGD|1311013 - symbol:Lrrc4c "leucine rich repeat containi... 139 1.9e-08 1
MGI|MGI:1916925 - symbol:Pxdn "peroxidasin homolog (Droso... 143 2.0e-08 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 143 2.0e-08 1
UNIPROTKB|F1NR89 - symbol:SLIT2 "Uncharacterized protein"... 140 2.2e-08 1
UNIPROTKB|Q92626 - symbol:PXDN "Peroxidasin homolog" spec... 141 3.3e-08 1
UNIPROTKB|F1NR92 - symbol:SLIT2 "Uncharacterized protein"... 140 4.0e-08 1
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 140 4.3e-08 1
UNIPROTKB|I3LDA4 - symbol:PXDN "Uncharacterized protein" ... 139 5.3e-08 1
UNIPROTKB|Q8IW52 - symbol:SLITRK4 "SLIT and NTRK-like pro... 136 2.8e-07 1
UNIPROTKB|Q8N145 - symbol:LGI3 "Leucine-rich repeat LGI f... 135 2.8e-07 1
UNIPROTKB|F1RMB5 - symbol:LGI3 "Uncharacterized protein" ... 135 2.8e-07 1
ZFIN|ZDB-GENE-080327-5 - symbol:sc:d0316 "sc:d0316" speci... 135 3.4e-07 1
UNIPROTKB|O75325 - symbol:LRRN2 "Leucine-rich repeat neur... 135 4.1e-07 1
RGD|1311079 - symbol:Lgi3 "leucine-rich repeat LGI family... 134 4.1e-07 1
ZFIN|ZDB-GENE-050522-533 - symbol:lrrc4c "leucine rich re... 134 5.2e-07 1
MGI|MGI:2182619 - symbol:Lgi3 "leucine-rich repeat LGI fa... 133 5.9e-07 1
FB|FBgn0010452 - symbol:trn "tartan" species:7227 "Drosop... 134 6.2e-07 1
UNIPROTKB|F1NHS1 - symbol:F1NHS1 "Uncharacterized protein... 134 6.2e-07 1
UNIPROTKB|O15335 - symbol:CHAD "Chondroadherin" species:9... 131 6.3e-07 1
UNIPROTKB|F1NJ43 - symbol:NYX "Uncharacterized protein" s... 132 7.2e-07 1
MGI|MGI:2156367 - symbol:Tlr3 "toll-like receptor 3" spec... 134 8.1e-07 1
MGI|MGI:1096866 - symbol:Chad "chondroadherin" species:10... 130 8.7e-07 1
UNIPROTKB|Q9DEQ5 - symbol:P37NB "P37NB protein" species:9... 131 9.0e-07 1
ZFIN|ZDB-GENE-091116-44 - symbol:lrrc4bb "leucine rich re... 133 9.1e-07 1
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 135 1.0e-06 1
RGD|1588563 - symbol:Slitrk4 "SLIT and NTRK-like family, ... 133 1.1e-06 1
UNIPROTKB|Q27972 - symbol:CHAD "Chondroadherin" species:9... 129 1.3e-06 1
UNIPROTKB|E1BP10 - symbol:SLIT1 "Uncharacterized protein"... 134 1.4e-06 1
UNIPROTKB|E1C0J7 - symbol:PXDNL "Uncharacterized protein"... 134 1.4e-06 1
UNIPROTKB|E1C0J1 - symbol:PXDNL "Uncharacterized protein"... 134 1.4e-06 1
UNIPROTKB|F1RQ64 - symbol:LOC100525800 "Uncharacterized p... 132 1.6e-06 1
FB|FBgn0029114 - symbol:Tollo "Tollo" species:7227 "Droso... 133 1.9e-06 1
UNIPROTKB|F1NN41 - symbol:PXDN "Uncharacterized protein" ... 133 2.0e-06 1
UNIPROTKB|F1N5L8 - symbol:SLITRK4 "Uncharacterized protei... 131 2.3e-06 1
MGI|MGI:2442509 - symbol:Slitrk4 "SLIT and NTRK-like fami... 131 2.3e-06 1
MGI|MGI:1924118 - symbol:Lrrc52 "leucine rich repeat cont... 126 2.7e-06 1
MGI|MGI:1923481 - symbol:Igsf10 "immunoglobulin superfami... 134 2.7e-06 1
ZFIN|ZDB-GENE-060503-496 - symbol:lrrc24 "leucine rich re... 129 3.0e-06 1
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 132 3.3e-06 1
RGD|735030 - symbol:Igsf10 "immunoglobulin superfamily, m... 133 3.9e-06 1
ZFIN|ZDB-GENE-040310-3 - symbol:rtn4rl1b "reticulon 4 rec... 127 4.0e-06 1
WB|WBGene00004854 - symbol:slt-1 species:6239 "Caenorhabd... 131 4.3e-06 1
UNIPROTKB|F1LS74 - symbol:Slit1 "Slit homolog 1 protein" ... 131 4.3e-06 1
UNIPROTKB|F1NEZ4 - symbol:SLITRK2 "Uncharacterized protei... 129 4.7e-06 1
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 131 4.7e-06 1
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 131 4.7e-06 1
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 131 4.7e-06 1
RGD|2336 - symbol:Chad "chondroadherin" species:10116 "Ra... 125 4.7e-06 1
UNIPROTKB|F1LN63 - symbol:Tlr3 "Protein Tlr3" species:101... 129 5.2e-06 1
UNIPROTKB|F1S9J3 - symbol:F1S9J3 "Uncharacterized protein... 130 5.8e-06 1
UNIPROTKB|E9PGH4 - symbol:TLR3 "Toll-like receptor 3" spe... 127 5.9e-06 1
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 130 6.2e-06 1
UNIPROTKB|F1MUR6 - symbol:RTN4RL2 "Uncharacterized protei... 125 6.2e-06 1
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 130 6.5e-06 1
ZFIN|ZDB-GENE-080327-25 - symbol:lrrc4ba "leucine rich re... 127 7.3e-06 1
FB|FBgn0023095 - symbol:caps "capricious" species:7227 "D... 127 7.5e-06 1
UNIPROTKB|Q86UN3 - symbol:RTN4RL2 "Reticulon-4 receptor-l... 124 8.4e-06 1
UNIPROTKB|F1S8Z0 - symbol:SLIT1 "Uncharacterized protein"... 129 8.7e-06 1
UNIPROTKB|O15455 - symbol:TLR3 "Toll-like receptor 3" spe... 127 9.6e-06 1
UNIPROTKB|Q3BBY1 - symbol:Q3BBY1 "Toll-like receptor 3" s... 127 9.6e-06 1
WARNING: Descriptions of 85 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|A1KZ92 [details] [associations]
symbol:PXDNL "Peroxidasin-like protein" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004601 "peroxidase activity"
evidence=ISS] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
GO:GO:0005737 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0090305 GO:GO:0004601 GO:GO:0004519 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0042744
SUPFAM:SSF48113 PROSITE:PS00435 EMBL:CH471068 MEROPS:I43.001
Gene3D:1.10.640.10 eggNOG:NOG262194 HOGENOM:HOG000016084
EMBL:AC090186 EMBL:EU170240 EMBL:AY877349 EMBL:AC103958
EMBL:AC107374 EMBL:AC011128 EMBL:AC012413 EMBL:AK058200
EMBL:AK131524 IPI:IPI00065049 IPI:IPI00890814 RefSeq:NP_653252.3
UniGene:Hs.444882 ProteinModelPortal:A1KZ92 SMR:A1KZ92
PeroxiBase:5398 PeroxiBase:5827 PhosphoSite:A1KZ92 PRIDE:A1KZ92
Ensembl:ENST00000356297 Ensembl:ENST00000543296 GeneID:137902
KEGG:hsa:137902 UCSC:uc003xqu.4 CTD:137902 GeneCards:GC08M052232
HGNC:HGNC:26359 HPA:HPA007919 neXtProt:NX_A1KZ92
PharmGKB:PA142671110 HOVERGEN:HBG108312 OMA:EFRYNDL
OrthoDB:EOG4HDSSN GenomeRNAi:137902 NextBio:83705 Bgee:A1KZ92
CleanEx:HS_PXDNL Genevestigator:A1KZ92 Uniprot:A1KZ92
Length = 1463
Score = 158 (60.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 30/85 (35%), Positives = 53/85 (62%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH-EL 91
+E++A+ K TFK L++L+ LY +FN +L + P +F + L+ +++NN ++ +P
Sbjct: 108 NEIHALDKQTFKGLISLEHLYIHFN-QLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSF 166
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWL 116
+ DSL+ L + SN CDC + WL
Sbjct: 167 SNLDSLKRLRLDSNALVCDCDLMWL 191
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 158 (60.7 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 39/122 (31%), Positives = 67/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +TF N+ +L TL ++N +L I ++FN SL+ ++ N I+S+P
Sbjct: 783 SNNSISMLTNHTFSNMSHLSTLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 841
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDCS++WL ++V K +P + CS P ++ LL+
Sbjct: 842 SFNDLTSLSHLALGTNPLHCDCSLRWLSEWV-KAGYKEPGI---ARCSSPESMADRLLLT 897
Query: 150 NP 151
P
Sbjct: 898 TP 899
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELG 92
+++ I K F L++LQ L N N K+ + +F + +L + +N + ++ L
Sbjct: 365 NKITEIPKGLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 93 -DWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
S++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 424 VPLQSIQTLHLAQNPFVCDCHLKWLADYL----QDNPIETSGARCSSPRRLAN 472
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 155 (59.6 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 40/122 (32%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + TF N+ +L TL ++N +L I +SFN SL+ ++ N I+S+P
Sbjct: 600 SNNSIGMLTNYTFSNMSHLSTLILSYN-RLRCIPIHSFNGLRSLRVLTLHGNDISSVPEG 658
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDCS++WL ++V K +P + CS P ++ LL+
Sbjct: 659 SFNDLTSLSHLALGTNPLHCDCSLRWLSEWV-KAGYKEPGI---ARCSSPEPMADRLLLT 714
Query: 150 NP 151
P
Sbjct: 715 TP 716
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 29/113 (25%), Positives = 56/113 (49%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL- 91
+++ I K F L++LQ L N N K+ + +F + +L + +N + ++ L
Sbjct: 179 NKITEIPKGLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 237
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 238 APLQAIQTLHLAQNPFVCDCHLKWLADYL----QDNPIETSGARCSSPRRLAN 286
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 39/122 (31%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + TF N+ +L TL ++N +L I ++FN SL+ ++ N I+S+P
Sbjct: 783 SNNSISMLTNYTFSNMSHLSTLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 841
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDCS++WL ++V K +P + CS P ++ LL+
Sbjct: 842 SFNDLTSLSHLALGTNPLHCDCSLRWLSEWV-KAGYKEPGI---ARCSSPEPMADRLLLT 897
Query: 150 NP 151
P
Sbjct: 898 TP 899
Score = 121 (47.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL- 91
+++ I K F L++LQ L N N K+ + +F + +L + +N + ++ L
Sbjct: 365 NKITEIVKGLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
S++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 424 APLQSIQTLHLAQNPFVCDCHLKWLADYL----QDNPIETSGARCSSPRRLAN 472
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 140 VKFSNVHLLSNP 151
V S ++LLSNP
Sbjct: 653 VSLSTINLLSNP 664
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +TF N+ +L TL ++N +L I ++FN SL+ ++ N I+S+P
Sbjct: 783 SNNSISMLTNHTFSNMSHLSTLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 841
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + NP CDCS++WL +++ K +P + CS P ++ LL+
Sbjct: 842 SFNDLTSLSHLALGINPLHCDCSLRWLSEWI-KAGYKEPGI---ARCSSPESMADRLLLT 897
Query: 150 NP 151
P
Sbjct: 898 TP 899
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL- 91
+++ I K F L++LQ L N N K+ + +F + +L + +N + ++ L
Sbjct: 365 NKITEIPKGLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
S++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 424 APLQSIQTLHLAQNPFVCDCHLKWLADYL----QDNPIETSGARCSSPRRLAN 472
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +TF N+ +L TL ++N +L I ++FN SL+ ++ N I+S+P
Sbjct: 783 SNNSISMLTNHTFSNMSHLSTLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 841
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + NP CDCS++WL +++ K +P + CS P ++ LL+
Sbjct: 842 SFNDLTSLSHLALGINPLHCDCSLRWLSEWI-KAGYKEPGI---ARCSSPESMADRLLLT 897
Query: 150 NP 151
P
Sbjct: 898 TP 899
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL- 91
+++ I K F L++LQ L N N K+ + +F + +L + +N + ++ L
Sbjct: 365 NKITEIPKGLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
S++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 424 APLQSIQTLHLAQNPFVCDCHLKWLADYL----QDNPIETSGARCSSPRRLAN 472
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 39/122 (31%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + TF N+ +L TL ++N +L I ++FN SL+ ++ N I+S+P
Sbjct: 783 SNNSISMLTNYTFSNMSHLSTLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 841
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDCS++WL ++V K +P + CS P ++ LL+
Sbjct: 842 SFNDLTSLSHLALGTNPLHCDCSLRWLSEWV-KAGYKEPGI---ARCSSPEPMADRLLLT 897
Query: 150 NP 151
P
Sbjct: 898 TP 899
Score = 121 (47.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL- 91
+++ I K F L++LQ L N N K+ + +F + +L + +N + ++ L
Sbjct: 365 NKITEIVKGLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 423
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
S++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 424 APLQSIQTLHLAQNPFVCDCHLKWLADYL----QDNPIETSGARCSSPRRLAN 472
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 140 VKFSNVHLLSNP 151
V S ++LLSNP
Sbjct: 653 VSLSTINLLSNP 664
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 150 (57.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LG 92
EL ++ + NL L L NPKL++IH +F + +L+ +NNNA+ ++ + +
Sbjct: 299 ELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAIYQKTVE 358
Query: 93 DWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLSNPL 152
+L + I SNP CDC I W+ + +P ++ C+ P ++ H + L
Sbjct: 359 SLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEP---LSMFCAMPPEYKG-HQVKEVL 414
Query: 153 LSHISGECV 161
+ S +C+
Sbjct: 415 IQDSSEQCL 423
>UNIPROTKB|F1PKU2 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EFRYNDL
EMBL:AAEX03015771 EMBL:AAEX03015772 EMBL:AAEX03015773
Ensembl:ENSCAFT00000010829 Uniprot:F1PKU2
Length = 1429
Score = 152 (58.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH-EL 91
+E+ A+ K TFK L++L+ LY +FN ++ + P +F + L+ +++NN ++ +P
Sbjct: 69 NEIRALDKQTFKGLISLEQLYIHFN-QIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSF 127
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWL 116
DSL+ L + SN CDC + WL
Sbjct: 128 SHLDSLKRLRLDSNALVCDCDLMWL 152
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 145 (56.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWD-SLEVLD 101
F++L L LY N LT +HP F N L+ ++ N +T+LP + D + +L L
Sbjct: 333 FRDLEELVKLYLGSN-NLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLA 391
Query: 102 IQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP 139
+ NPW CDC + +L +++ +Q TD LN +C+ P
Sbjct: 392 LHGNPWQCDCHLAYLFNWL--QQYTDRLLNIQTYCAGP 427
>UNIPROTKB|Q8N7C0 [details] [associations]
symbol:LRRC52 "Leucine-rich repeat-containing protein 52"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0005216 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:AK098677 EMBL:AL157714 EMBL:BC132981 EMBL:BC132983
IPI:IPI00297687 RefSeq:NP_001005214.2 UniGene:Hs.664975
ProteinModelPortal:Q8N7C0 SMR:Q8N7C0 DMDM:90185259 PRIDE:Q8N7C0
Ensembl:ENST00000294818 GeneID:440699 KEGG:hsa:440699
UCSC:uc001gde.2 CTD:440699 GeneCards:GC01P165513 HGNC:HGNC:32156
neXtProt:NX_Q8N7C0 PharmGKB:PA142671512 eggNOG:NOG307084
HOGENOM:HOG000233985 HOVERGEN:HBG056592 InParanoid:Q8N7C0
OMA:YQNARRK OrthoDB:EOG44MXSK PhylomeDB:Q8N7C0 GenomeRNAi:440699
NextBio:109455 Bgee:Q8N7C0 CleanEx:HS_LRRC52 Genevestigator:Q8N7C0
GermOnline:ENSG00000162763 Uniprot:Q8N7C0
Length = 313
Score = 140 (54.3 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 5 QNSGSRQDISYDTQYTIMK-VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFI 63
QN+ R+ + Y T + K + L S+ N L +I TF L NL L NP L +
Sbjct: 85 QNNRIREVMDY-TFIGVFKLIYLDLSSNN--LTSISPFTFSVLSNLVQLNIANNPHLLSL 141
Query: 64 HPYSFNNDWSLKEFYINNNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCS-IQWLIDYVA 121
H ++F N SL+ + N + +L L +LE L + NPW C+CS + + I +
Sbjct: 142 HKFTFANTTSLRYLDLRNTGLQTLDSAALYHLTTLETLFLSGNPWKCNCSFLDFAIFLIV 201
Query: 122 KRQRTDPELNYNLHCSQPVKFSN--VHLLSNPL 152
DP + N C +P + + + + NPL
Sbjct: 202 FHM--DPSDDLNATCVEPTELTGWPITRVGNPL 232
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 142 (55.0 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L AIR +F+ L++LQ L+ ++ I +F+N SL E + +N +T LPH+
Sbjct: 204 SGNHLTAIRPGSFQGLMHLQKLWM-IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 262
Query: 91 LGDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C I WL
Sbjct: 263 LFTPLRLERIHLHHNPWNCNCDILWL 288
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 148 (57.2 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + TF N+ +L TL ++N +L I ++F+ SL+ ++ N I+S+P
Sbjct: 580 SNNSIGVLTNYTFSNMSHLSTLILSYN-RLRCIPIHAFDGLRSLRVLTLHGNDISSVPEG 638
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDCS++WL ++V K +P + CS P ++ LL+
Sbjct: 639 SFSDLTSLSHLALGTNPLHCDCSLRWLSEWV-KAGYKEPGI---ARCSSPEPMADRLLLT 694
Query: 150 NP 151
P
Sbjct: 695 TP 696
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 28/113 (24%), Positives = 56/113 (49%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL- 91
+++ + K F L++LQ L N N K+ + +F + +L + +N + ++ L
Sbjct: 162 NKITELAKGLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLF 220
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 221 APLQAIQTLHLAQNPFVCDCHLKWLADYL----QDNPIETSGARCSSPRRLAN 269
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 148 (57.2 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I P +F+ SL+ ++ N I+ +P
Sbjct: 592 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 650
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 651 AFSDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 706
Query: 150 NP 151
P
Sbjct: 707 TP 708
>UNIPROTKB|Q90Z43 [details] [associations]
symbol:SLIT3 "Slit3 protein" species:9031 "Gallus gallus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0048839
"inner ear development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IEP] [GO:0060173 "limb development" evidence=IEP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0007411 GO:GO:0008285 GO:GO:0005615
GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0060173 GO:GO:0048839
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 HSSP:P00740 GO:GO:0070100 Pfam:PF12661 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AADN02035923
EMBL:AF364046 IPI:IPI00821967 UniGene:Gga.2000 STRING:Q90Z43
Ensembl:ENSGALT00000041139 InParanoid:Q90Z43 Uniprot:Q90Z43
Length = 792
Score = 145 (56.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + TF N+ L TL ++N +L I ++FN SL+ ++ N I+S+P
Sbjct: 51 SNNSISVLANYTFSNMTQLSTLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 109
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDC+++WL ++V K +P + CS P + LL+
Sbjct: 110 SFNDLVSLSHLALGTNPLHCDCNLRWLSEWV-KAGYKEPGI---ARCSGPEAMVDRLLLT 165
Query: 150 NP 151
P
Sbjct: 166 TP 167
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 148 (57.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I P +F+ SL+ ++ N I+ +P
Sbjct: 777 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 835
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 836 AFNDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 891
Query: 150 NP 151
P
Sbjct: 892 TP 893
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 148 (57.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I P +F+ SL+ ++ N I+ +P
Sbjct: 785 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 843
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 844 AFNDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 899
Query: 150 NP 151
P
Sbjct: 900 TP 901
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 148 (57.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I P +F+ SL+ ++ N I+ +P
Sbjct: 785 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 843
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 844 AFSDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 899
Query: 150 NP 151
P
Sbjct: 900 TP 901
>ZFIN|ZDB-GENE-050320-95 [details] [associations]
symbol:islr2 "immunoglobulin superfamily containing
leucine-rich repeat 2" species:7955 "Danio rerio" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-050320-95 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57611 HOGENOM:HOG000113108 HOVERGEN:HBG100863 EMBL:BC090831
IPI:IPI00510044 RefSeq:NP_001013541.1 UniGene:Dr.120799
ProteinModelPortal:Q5BL20 IntAct:Q5BL20 STRING:Q5BL20 GeneID:541396
KEGG:dre:541396 InParanoid:Q5BL20 NextBio:20879208
ArrayExpress:Q5BL20 Uniprot:Q5BL20
Length = 712
Score = 144 (55.7 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+N+++ NL LQ L N N ++ I +F+N L+ INNN T++
Sbjct: 109 SNNKIVHFPWEDLANLGALQLLKMN-NNEMVSIPKNAFSNLKDLRSIRINNNKFTTIVQ- 166
Query: 91 LGDWDSLEV---LDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL 147
G +DSL L I NP+ C C+++WL D++ K + PE N N+ C P +
Sbjct: 167 -GTFDSLAAMSHLQIFHNPFICSCNLEWLRDWILKSSISIPEQN-NIACDAPSHLKGSQV 224
Query: 148 LSNPLLS 154
S P L+
Sbjct: 225 TSMPKLN 231
>UNIPROTKB|F1S5C4 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:CU929485
Ensembl:ENSSSCT00000009572 OMA:XVETIND Uniprot:F1S5C4
Length = 1045
Score = 146 (56.5 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 36/122 (29%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L + P +F+ SL+ ++ N I+ +P
Sbjct: 298 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCLPPRTFDGLKSLRLLSLHGNDISVVPEG 356
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 357 AFNDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 412
Query: 150 NP 151
P
Sbjct: 413 TP 414
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 142 (55.0 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L AIR +F+ L++LQ L+ ++ I +F+N SL E + +N +T LPH+
Sbjct: 195 SGNHLTAIRPGSFQGLMHLQKLWM-IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 253
Query: 91 LGDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C I WL
Sbjct: 254 LFTPLRLERIHLHHNPWNCNCDILWL 279
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 141 (54.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 35/125 (28%), Positives = 66/125 (52%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGD-WDS 96
+ K F +L+ L+ LY + N +L++I SF N SL ++N+N +TSLP +
Sbjct: 265 VSKTWFSDLVELEVLYLDRN-RLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVFQPIYF 323
Query: 97 LEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLSNPLLSHI 156
+ L + NPW C C ++WL +++ + L ++ C+ P + + L S + +H+
Sbjct: 324 IGRLYLFRNPWECTCDLEWLREWMESYK-----LVRDIPCASPSSVAGLDL-SEVVFAHL 377
Query: 157 SGECV 161
+ C+
Sbjct: 378 NSTCL 382
>UNIPROTKB|F1NL15 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
Pfam:PF01463 GeneTree:ENSGT00700000104083 EMBL:AADN02035923
IPI:IPI00818500 Ensembl:ENSGALT00000041140 ArrayExpress:F1NL15
Uniprot:F1NL15
Length = 1094
Score = 145 (56.1 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + TF N+ L TL ++N +L I ++FN SL+ ++ N I+S+P
Sbjct: 353 SNNSISVLANYTFSNMTQLSTLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 411
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDC+++WL ++V K +P + CS P + LL+
Sbjct: 412 SFNDLVSLSHLALGTNPLHCDCNLRWLSEWV-KAGYKEPGI---ARCSGPEAMVDRLLLT 467
Query: 150 NP 151
P
Sbjct: 468 TP 469
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 146 (56.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I P +F+ SL+ ++ N I+ +P
Sbjct: 787 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 845
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 846 AFNDLAALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 901
Query: 150 NP 151
P
Sbjct: 902 TP 903
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 142 (55.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH-ELG 92
EL +I NL +L+ + NP+L++IHP +F L+ +N+NA+++L H +
Sbjct: 296 ELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIE 355
Query: 93 DWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+L+ + I SNP CDC I+W+ + +P+ +L C P +F
Sbjct: 356 SLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPD---SLFCVDPPEF 402
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 142 (55.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 34/110 (30%), Positives = 59/110 (53%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH-ELG 92
EL +I NL +L+ + NP+L++IHP +F L+ +N+NA+++L H +
Sbjct: 296 ELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIE 355
Query: 93 DWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+L+ + I SNP CDC I+W+ + +P+ +L C P +F
Sbjct: 356 SLPNLKEISIHSNPIRCDCVIRWMNMNKTNIRFMEPD---SLFCVDPPEF 402
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 145 (56.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + TF N+ L TL ++N +L I ++FN SL+ ++ N I+S+P
Sbjct: 597 SNNSISVLANYTFSNMTQLSTLILSYN-RLRCIPVHAFNGLRSLRVLTLHGNDISSVPEG 655
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDC+++WL ++V K +P + CS P + LL+
Sbjct: 656 SFNDLVSLSHLALGTNPLHCDCNLRWLSEWV-KAGYKEPGI---ARCSGPEAMVDRLLLT 711
Query: 150 NP 151
P
Sbjct: 712 TP 713
Score = 121 (47.7 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 30/113 (26%), Positives = 57/113 (50%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL- 91
+++ I + F +L++LQ L N N K+ + +F +LK + +N + ++ L
Sbjct: 179 NKITEIPQGLFDDLVSLQLLLLNAN-KINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLF 237
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
S++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 238 APLRSIQTLHLAQNPFVCDCHLKWLADYL----QDNPIETSGARCSNPRRLAN 286
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 141 (54.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/110 (30%), Positives = 58/110 (52%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH-ELG 92
EL +I NL +L+ + NP+L++IHP +F L+ +N NA+++L H +
Sbjct: 296 ELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNTNALSALYHGTIE 355
Query: 93 DWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+L+ + I SNP CDC I+W+ + +P+ +L C P +F
Sbjct: 356 SLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPD---SLFCVDPPEF 402
>ZFIN|ZDB-GENE-060217-1 [details] [associations]
symbol:lgi1b "leucine-rich, glioma inactivated 1b"
species:7955 "Danio rerio" [GO:0048854 "brain morphogenesis"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-060217-1 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048854 InterPro:IPR009039
PROSITE:PS50912 InterPro:IPR005492 Pfam:PF03736
GeneTree:ENSGT00390000016191 EMBL:CU463858 IPI:IPI00898714
Ensembl:ENSDART00000081298 OMA:LTQVYQW Bgee:F1R662 Uniprot:F1R662
Length = 543
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 24 VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNA 83
+QL TANS I ++ F+ L +L+ L+ N K+ I P++F SL + N
Sbjct: 85 LQLLLFTANS-FDLIDEDAFQGLPHLEYLFIE-NNKIESISPHAFRGLKSLIHLSLAYNN 142
Query: 84 ITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+ +LP ++ D+L +D++ N ++CDC ++WL++++ T +L +CS P +
Sbjct: 143 LETLPRDIFKGMDALTKVDLRGNLFSCDCKLKWLVEWMFSTNATVDQL----YCSGPSPY 198
Query: 143 SNVHLLSNPLLSHISGECVKGALVISQ 169
+ N L+ S +C+ + +
Sbjct: 199 QGKKI--NDLMPQ-SFDCITAEFALKK 222
>UNIPROTKB|F1Q057 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EPVITWN
EMBL:AAEX03010629 EMBL:AAEX03010630 EMBL:AAEX03010631
EMBL:AAEX03010632 EMBL:AAEX03010633 EMBL:AAEX03010634
PeroxiBase:10035 Ensembl:ENSCAFT00000005177 Uniprot:F1Q057
Length = 1408
Score = 144 (55.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/87 (36%), Positives = 50/87 (57%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PHEL 91
+E+ AI + FK L +L+ LY +FN ++ + P SF + L+ +++NN IT L P
Sbjct: 53 NEIQAIDRQAFKGLASLEQLYLHFN-QIETLDPESFQHLPKLERLFLHNNRITHLVPGTF 111
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLID 118
+S++ L + SN CDC I WL D
Sbjct: 112 DHLESMKRLRLDSNALHCDCEILWLAD 138
>UNIPROTKB|F1NR94 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR001791 Pfam:PF00054 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250 EMBL:AADN02015251
EMBL:AADN02015252 EMBL:AADN02015253 EMBL:AADN02015254
EMBL:AADN02015255 EMBL:AADN02015256 EMBL:AADN02015257
EMBL:AADN02015258 EMBL:AADN02015259 EMBL:AADN02015260
EMBL:AADN02015261 EMBL:AADN02015262 EMBL:AADN02015263
EMBL:AADN02015264 EMBL:AADN02015265 EMBL:AADN02015266
EMBL:AADN02015267 EMBL:AADN02015268 EMBL:AADN02015269
EMBL:AADN02015270 EMBL:AADN02015271 IPI:IPI00594561
Ensembl:ENSGALT00000037314 ArrayExpress:F1NR94 Uniprot:F1NR94
Length = 666
Score = 140 (54.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I +F+ SL+ ++ N I+ +P
Sbjct: 126 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPARTFDGLKSLRLLSLHGNDISVVPEG 184
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 185 AFNDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 240
Query: 150 NP 151
P
Sbjct: 241 TP 242
>UNIPROTKB|A0N0X6 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:EF093509 IPI:IPI00699748 RefSeq:NP_001074207.1
UniGene:Bt.17579 ProteinModelPortal:A0N0X6 PRIDE:A0N0X6
Ensembl:ENSBTAT00000001560 GeneID:539619 KEGG:bta:539619 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 InParanoid:A0N0X6 OMA:GINNMGE OrthoDB:EOG4XKV6G
BioCyc:CATTLE:539619-MONOMER NextBio:20878110 Uniprot:A0N0X6
Length = 716
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LG 92
EL ++ + NL L L NPKL++IH +F + +L+ +NNNA+ ++ + +
Sbjct: 299 ELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVE 358
Query: 93 DWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLSNPL 152
+L + I SNP CDC I W+ + +P ++ C+ P ++ + L
Sbjct: 359 SLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEP---LSMFCAMPPEYRGQQV-KEVL 414
Query: 153 LSHISGECV 161
+ S +C+
Sbjct: 415 IQDSSEQCL 423
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LG 92
EL ++ + NL L L NPKL++IH +F + +L+ +NNNA+ ++ + +
Sbjct: 299 ELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVE 358
Query: 93 DWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLSNPL 152
+L + I SNP CDC I W+ + +P ++ C+ P ++ + L
Sbjct: 359 SLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEP---LSMFCAMPPEYRGQQV-KEVL 414
Query: 153 LSHISGECV 161
+ S +C+
Sbjct: 415 IQDSSEQCL 423
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LG 92
EL ++ + NL L L NPKL++IH +F + +L+ +NNNA+ ++ + +
Sbjct: 299 ELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQKTVE 358
Query: 93 DWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLSNPL 152
+L + I SNP CDC I W+ + +P ++ C+ P ++ + L
Sbjct: 359 SLPNLREISIHSNPLRCDCVIHWINSNKTNIRFMEP---LSMFCAMPPEYRGQQV-KEVL 414
Query: 153 LSHISGECV 161
+ S +C+
Sbjct: 415 IQDSSEQCL 423
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 36/129 (27%), Positives = 61/129 (47%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGD 93
EL +I + NL L L NPK +++ +F + +L+ +NNNA+ SL D
Sbjct: 300 ELVSIDRFALDNLPELTKLEATNNPKFSYVSRLAFRDLPALESLMLNNNALNSLYQATAD 359
Query: 94 -WDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLSNPL 152
+L + I SNP CDC IQW+ + +P ++ C+ P++ + +
Sbjct: 360 SLPNLREISIHSNPLRCDCVIQWMSSNKTTIRFMEP---LSMFCTMPIEVRGQRV-RDVF 415
Query: 153 LSHISGECV 161
SG+C+
Sbjct: 416 SREPSGQCL 424
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L AIR +F+ L++LQ L+ ++ I +F+N SL E + +N +T LPH+
Sbjct: 227 SGNHLSAIRPGSFQGLMHLQKLWM-IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 285
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C I WL
Sbjct: 286 LFTPLHHLERIHLHHNPWNCNCDILWL 312
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L AIR +F+ L++LQ L+ ++ I +F+N SL E + +N +T LPH+
Sbjct: 227 SGNHLSAIRPGSFQGLMHLQKLWM-IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 285
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C I WL
Sbjct: 286 LFTPLHHLERIHLHHNPWNCNCDILWL 312
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L AIR +F+ L++LQ L+ ++ I +F+N SL E + +N +T LPH+
Sbjct: 227 SGNHLSAIRPGSFQGLMHLQKLWM-IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 285
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C I WL
Sbjct: 286 LFTPLHHLERIHLHHNPWNCNCDILWL 312
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L AIR +F+ L++LQ L+ ++ I +F+N SL E + +N +T LPH+
Sbjct: 227 SGNHLSAIRPGSFQGLMHLQKLWM-IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 285
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C I WL
Sbjct: 286 LFTPLHHLERIHLHHNPWNCNCDILWL 312
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L AIR +F+ L++LQ L+ ++ I +F+N SL E + +N +T LPH+
Sbjct: 227 SGNHLSAIRPGSFQGLMHLQKLWM-IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 285
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C I WL
Sbjct: 286 LFTPLHHLERIHLHHNPWNCNCDILWL 312
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L AIR +F+ L++LQ L+ ++ I +F+N SL E + +N +T LPH+
Sbjct: 227 SGNHLSAIRPGSFQGLMHLQKLWM-IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 285
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C I WL
Sbjct: 286 LFTPLHHLERIHLHHNPWNCNCDILWL 312
>MGI|MGI:1916925 [details] [associations]
symbol:Pxdn "peroxidasin homolog (Drosophila)" species:10090
"Mus musculus" [GO:0004601 "peroxidase activity" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0020037 "heme binding" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO;IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
MGI:MGI:1916925 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
HSSP:P21809 GO:GO:0005201 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084
HOVERGEN:HBG108312 CTD:7837 OMA:EPVITWN OrthoDB:EOG4J1179
EMBL:AK142872 EMBL:AC159626 EMBL:AC165078 EMBL:BC112913
IPI:IPI00461384 RefSeq:NP_852060.2 UniGene:Mm.251774
ProteinModelPortal:Q3UQ28 SMR:Q3UQ28 PhosphoSite:Q3UQ28
PaxDb:Q3UQ28 PRIDE:Q3UQ28 Ensembl:ENSMUST00000122328 GeneID:69675
KEGG:mmu:69675 UCSC:uc007ngl.2 InParanoid:Q3UQ28 NextBio:330062
Bgee:Q3UQ28 CleanEx:MM_PXDN Genevestigator:Q3UQ28 Uniprot:Q3UQ28
Length = 1475
Score = 143 (55.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PHEL 91
+E+ +I + FK L +L+ LY +FN ++ + P SF + L+ +++NN IT L P
Sbjct: 117 NEIQSIDRQAFKGLASLEQLYLHFN-QIETLDPESFQHLPKLERLFLHNNRITHLVPGTF 175
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLID 118
+S++ L + SN CDC I WL D
Sbjct: 176 SQLESMKRLRLDSNALHCDCEILWLAD 202
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 143 (55.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+N+ + + + FK +L++L + N ++T + ++F L+ +NNN +TSLPH
Sbjct: 180 SNNVITTVGRRVFKGAQSLRSLQLD-NNQITCLDEHAFKGLVELEILTLNNNNLTSLPHN 238
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP--VKFSNV 145
+ G L L + NP+ CDC + WL ++ R P Y C P +K NV
Sbjct: 239 IFGGLGRLRALRLSDNPFACDCHLSWLSRFLRSATRLAP---YT-RCQSPSQLKGQNV 292
Score = 143 (55.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+++ + TF NL L TL ++N KL + ++ + +L+ ++ N I+ LP
Sbjct: 798 SNNQITILSNYTFANLTKLSTLIISYN-KLQCLQRHALSGLNNLRVLSLHGNRISMLPEG 856
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL + + SNP CDC ++W D++ K +P + C++P + + +LS
Sbjct: 857 SFEDLKSLTHIALGSNPLYCDCGLKWFSDWI-KLDYVEPGI---ARCAEPEQMKDKLILS 912
Query: 150 NPLLSHI 156
P S +
Sbjct: 913 TPSSSFV 919
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGD-WDSLEVLD 101
FK L +LQ L N N +++ I +F + SL + +N I SL + D S++ +
Sbjct: 414 FKGLGSLQLLLLNAN-EISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVH 472
Query: 102 IQSNPWTCDCSIQWLIDYVAK 122
+ NP+ CDC+++WL DY+ K
Sbjct: 473 LAKNPFICDCNLRWLADYLHK 493
>UNIPROTKB|F1NR89 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0010596 GO:GO:0001933 GO:GO:0071676 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0070100
GO:GO:0090288 GO:GO:0045499 Pfam:PF01463 GO:GO:0010593
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050929
GO:GO:0090024 GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00821752 Ensembl:ENSGALT00000037322 ArrayExpress:F1NR89
Uniprot:F1NR89
Length = 870
Score = 140 (54.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I +F+ SL+ ++ N I+ +P
Sbjct: 126 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPARTFDGLKSLRLLSLHGNDISVVPEG 184
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 185 AFNDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 240
Query: 150 NP 151
P
Sbjct: 241 TP 242
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 141 (54.7 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PHEL 91
+E+ +I + FK L +L+ LY +FN ++ + P SF + L+ +++NN IT L P
Sbjct: 120 NEIQSIDRQAFKGLASLEQLYLHFN-QIETLDPDSFQHLPKLERLFLHNNRITHLVPGTF 178
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLID 118
+S++ L + SN CDC I WL D
Sbjct: 179 NHLESMKRLRLDSNTLHCDCEILWLAD 205
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 140 (54.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I +F+ SL+ ++ N I+ +P
Sbjct: 681 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPARTFDGLKSLRLLSLHGNDISVVPEG 739
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 740 AFNDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 795
Query: 150 NP 151
P
Sbjct: 796 TP 797
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 30 TANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-P 88
T+N L +R FK L +L+TL N +++ + SF S++ + +N IT++ P
Sbjct: 486 TSN-RLETVRDKMFKGLESLKTLMLRSN-RVSCVGNDSFTGLSSVRLLSLYDNQITTVAP 543
Query: 89 HELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
SL L++ +NP+ C+C + WL D++ K++
Sbjct: 544 GSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKR 579
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 140 (54.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + +F N+ L TL ++N +L I +F+ SL+ ++ N I+ +P
Sbjct: 781 SNNRISTLSNQSFSNMTQLLTLILSYN-RLRCIPARTFDGLKSLRLLSLHGNDISVVPEG 839
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D +L L I +NP CDC++QWL D+V K + +P + C+ P + ++ LL+
Sbjct: 840 AFNDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEYKEPGI---ARCAGPGEMADKLLLT 895
Query: 150 NP 151
P
Sbjct: 896 TP 897
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 30 TANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-P 88
T+N L +R FK L +L+TL N +++ + SF S++ + +N IT++ P
Sbjct: 586 TSN-RLETVRDKMFKGLESLKTLMLRSN-RVSCVGNDSFTGLSSVRLLSLYDNQITTVAP 643
Query: 89 HELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
SL L++ +NP+ C+C + WL D++ K++
Sbjct: 644 GSFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRKKR 679
>UNIPROTKB|I3LDA4 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0020037 "heme binding" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0004601
"peroxidase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006979 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10
GeneTree:ENSGT00550000074325 CTD:7837 OMA:EPVITWN EMBL:FP102546
EMBL:FP565715 RefSeq:XP_003125453.3 Ensembl:ENSSSCT00000022979
GeneID:100516076 KEGG:ssc:100516076 Uniprot:I3LDA4
Length = 1479
Score = 139 (54.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PHEL 91
+E+ +I + F+ L +L+ LY +FN ++ + P SF + L+ +++NN IT L P
Sbjct: 120 NEIQSIDRQAFQGLASLEQLYLHFN-QIETLDPESFQHLPKLERLFLHNNRITYLVPGTF 178
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRT 126
+S++ L + SN CDC I WL D + R+
Sbjct: 179 NHLESMKRLRLDSNALRCDCEILWLADLLKTYARS 213
>UNIPROTKB|Q8IW52 [details] [associations]
symbol:SLITRK4 "SLIT and NTRK-like protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL080239 EMBL:CH471170 EMBL:BC040986
EMBL:AL713693 EMBL:AK057619 IPI:IPI00217146 RefSeq:NP_001171678.1
RefSeq:NP_001171679.1 RefSeq:NP_775101.1 UniGene:Hs.272284
ProteinModelPortal:Q8IW52 SMR:Q8IW52 PhosphoSite:Q8IW52
DMDM:46396931 PaxDb:Q8IW52 PRIDE:Q8IW52 DNASU:139065
Ensembl:ENST00000338017 Ensembl:ENST00000356928
Ensembl:ENST00000381779 GeneID:139065 KEGG:hsa:139065
UCSC:uc004fbx.3 CTD:139065 GeneCards:GC0XM142715 HGNC:HGNC:23502
HPA:HPA001039 MIM:300562 neXtProt:NX_Q8IW52 PharmGKB:PA134926932
InParanoid:Q8IW52 OMA:TVFVAFC OrthoDB:EOG4VHK5S PhylomeDB:Q8IW52
GenomeRNAi:139065 NextBio:83882 Bgee:Q8IW52 CleanEx:HS_SLITRK4
Genevestigator:Q8IW52 GermOnline:ENSG00000179542 Uniprot:Q8IW52
Length = 837
Score = 136 (52.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 41/120 (34%), Positives = 57/120 (47%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE--LGDWD 95
I TF ++ NLQ LY N N L + Y F+ L + NN LP L
Sbjct: 464 ISAGTFDSMPNLQLLYLN-NNLLKSLPVYIFSGA-PLARLNLRNNKFMYLPVSGVLDQLQ 521
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL--LSNPLL 153
SL +D++ NPW C C + L +V K +D + L C PV+F+N+ L L N +L
Sbjct: 522 SLTQIDLEGNPWDCTCDLVALKLWVEKL--SDGIVVKELKCETPVQFANIELKSLKNEIL 579
>UNIPROTKB|Q8N145 [details] [associations]
symbol:LGI3 "Leucine-rich repeat LGI family member 3"
species:9606 "Homo sapiens" [GO:0006887 "exocytosis" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0017157 "regulation
of exocytosis" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0043005 "neuron projection" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005576 GO:GO:0030054 GO:GO:0008021
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043005 GO:GO:0006887 GO:GO:0017157 InterPro:IPR009039
PROSITE:PS50912 InterPro:IPR005492 Pfam:PF03736
HOGENOM:HOG000286015 HOVERGEN:HBG036744 EMBL:AF467956 EMBL:AJ487961
EMBL:AJ487518 EMBL:AY358116 EMBL:AK090946 EMBL:BC042542
IPI:IPI00166075 RefSeq:NP_644807.1 UniGene:Hs.33470
ProteinModelPortal:Q8N145 SMR:Q8N145 STRING:Q8N145 DMDM:32469742
PRIDE:Q8N145 Ensembl:ENST00000306317 GeneID:203190 KEGG:hsa:203190
UCSC:uc003xav.3 CTD:203190 GeneCards:GC08M022060 HGNC:HGNC:18711
HPA:HPA024826 MIM:608302 neXtProt:NX_Q8N145 PharmGKB:PA38655
eggNOG:NOG150661 InParanoid:Q8N145 OMA:TCSCTKD OrthoDB:EOG48KRB0
PhylomeDB:Q8N145 ChiTaRS:LGI3 GenomeRNAi:203190 NextBio:90360
ArrayExpress:Q8N145 Bgee:Q8N145 CleanEx:HS_LGI3
Genevestigator:Q8N145 GermOnline:ENSG00000168481 Uniprot:Q8N145
Length = 548
Score = 135 (52.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 26 LPYSTANSELYA-IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAI 84
L + NS + I N F L +LQ L+ N + + ++F SL + NN +
Sbjct: 90 LQFLLLNSNKFTLIGDNAFTGLSHLQYLFIE-NNDIWALSKFTFRGLKSLTHLSLANNNL 148
Query: 85 TSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFS 143
+LP ++ D L LD++ N CDC ++WL++++A T + +C+ P +F
Sbjct: 149 QTLPRDIFRPLDILNDLDLRGNSLNCDCKVKWLVEWLAHTNTTVAPI----YCASPPRFQ 204
Query: 144 NVHLLSNPLLSHISGECVKGALVISQ 169
+ PL +C+ V+ Q
Sbjct: 205 EHKVQDLPLREF---DCITTDFVLYQ 227
>UNIPROTKB|F1RMB5 [details] [associations]
symbol:LGI3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017157 "regulation of exocytosis" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR001611 InterPro:IPR011041
PROSITE:PS51450 GO:GO:0003824 GO:GO:0008021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008152
GO:GO:0017157 InterPro:IPR009039 PROSITE:PS50912 SUPFAM:SSF50952
InterPro:IPR005492 Pfam:PF03736 GeneTree:ENSGT00390000016191
OMA:TCSCTKD EMBL:CT827951 RefSeq:XP_003132845.1 UniGene:Ssc.26289
Ensembl:ENSSSCT00000023580 GeneID:100512015 KEGG:ssc:100512015
Uniprot:F1RMB5
Length = 548
Score = 135 (52.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 26 LPYSTANSELYA-IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAI 84
L + NS + I N F L +LQ L+ N + + ++F SL + NN +
Sbjct: 90 LQFLLLNSNKFTLIGDNAFTGLSHLQYLFIE-NNDIWALSKFTFRGLKSLTHLSLANNNL 148
Query: 85 TSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFS 143
+LP ++ D L LD++ N CDC ++WL++++A T + +C+ P +F
Sbjct: 149 QTLPRDIFRPLDILSDLDLRGNSLNCDCKVKWLVEWLAHTNTTVAPI----YCASPPRFQ 204
Query: 144 NVHLLSNPLLSHISGECVKGALVISQ 169
+ PL +C+ V+ Q
Sbjct: 205 EHKVQDLPLREF---DCITTDFVLYQ 227
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 135 (52.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 32/110 (29%), Positives = 60/110 (54%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ ++L I+ ++FK L++LQ L+ + ++ I SF++ SL+E + +N +T LPH+
Sbjct: 228 SGNQLTVIQPSSFKGLVHLQKLWM-MHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHD 286
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP 139
L L+ + + NPW C+C I WL ++ R+ + C+ P
Sbjct: 287 LYTPLHHLQRVHLHHNPWNCNCDILWLSWWL--RETVPTNTSCCARCNSP 334
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 135 (52.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 34 ELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LG 92
EL +I K NL L L NP+L+FIHP +F++ ++ +NNNA+++L + +
Sbjct: 297 ELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVE 356
Query: 93 DWDSLEVLDIQSNPWTCDCSIQW 115
+L+ + + NP CDC I+W
Sbjct: 357 SLPNLQEVGLHGNPIRCDCVIRW 379
>RGD|1311079 [details] [associations]
symbol:Lgi3 "leucine-rich repeat LGI family, member 3"
species:10116 "Rattus norvegicus" [GO:0008021 "synaptic vesicle"
evidence=IEA;ISO] [GO:0017157 "regulation of exocytosis"
evidence=IEA;ISO] InterPro:IPR001611 PROSITE:PS51450 RGD:1311079
GO:GO:0008021 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0017157 InterPro:IPR009039 PROSITE:PS50912
EMBL:CH473951 InterPro:IPR005492 Pfam:PF03736
GeneTree:ENSGT00390000016191 CTD:203190 OMA:TCSCTKD
OrthoDB:EOG48KRB0 IPI:IPI00959892 RefSeq:NP_001100747.1
UniGene:Rn.50862 Ensembl:ENSRNOT00000015104 GeneID:306013
KEGG:rno:306013 UCSC:RGD:1311079 NextBio:655408 Uniprot:D3ZN61
Length = 548
Score = 134 (52.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 26 LPYSTANSELYA-IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAI 84
L + NS + I N F L +LQ L+ N + + ++F SL + NN +
Sbjct: 90 LQFLLLNSNKFTLIGDNAFTGLSHLQYLFIE-NNDIWGLSKFTFRGLKSLTHLSLANNNL 148
Query: 85 TSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFS 143
+LP ++ D L LD++ N CDC ++WL++++A T + +C+ P +F
Sbjct: 149 QTLPRDIFRPLDILSDLDLRGNALNCDCKVKWLVEWLAHTNTTVAPI----YCASPPRFQ 204
Query: 144 NVHLLSNPLLSHISGECVKGALVISQ 169
+ PL +C+ V+ Q
Sbjct: 205 EHKVQDLPLREF---DCITTDFVLYQ 227
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 134 (52.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 33/110 (30%), Positives = 58/110 (52%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ ++L IR +FK L++LQ L+ + ++ I +F++ SL E + +N +T LPH+
Sbjct: 228 SGNQLSIIRPGSFKGLVHLQKLWM-MHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHD 286
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP 139
L LE + + NPW C+C I WL ++ ++ + CS P
Sbjct: 287 LFTPLHHLERVHLHHNPWNCNCDILWLSWWL--KEMVPANTSCCARCSSP 334
>MGI|MGI:2182619 [details] [associations]
symbol:Lgi3 "leucine-rich repeat LGI family, member 3"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0017157 "regulation of exocytosis"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0043005 "neuron projection"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2182619 GO:GO:0005576
GO:GO:0030054 GO:GO:0008021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043005 GO:GO:0006887
GO:GO:0017157 InterPro:IPR009039 PROSITE:PS50912 InterPro:IPR005492
Pfam:PF03736 HOGENOM:HOG000286015 HOVERGEN:HBG036744
GeneTree:ENSGT00390000016191 CTD:203190 eggNOG:NOG150661
OMA:TCSCTKD OrthoDB:EOG48KRB0 EMBL:AF515590 EMBL:AY174077
EMBL:AK049831 EMBL:BC055315 EMBL:BC061460 IPI:IPI00170121
RefSeq:NP_660254.1 UniGene:Mm.41708 ProteinModelPortal:Q8K406
SMR:Q8K406 STRING:Q8K406 PaxDb:Q8K406 PRIDE:Q8K406
Ensembl:ENSMUST00000047331 GeneID:213469 KEGG:mmu:213469
UCSC:uc007uoh.2 InParanoid:Q8K406 NextBio:373994 Bgee:Q8K406
CleanEx:MM_LGI3 Genevestigator:Q8K406 GermOnline:ENSMUSG00000033595
Uniprot:Q8K406
Length = 548
Score = 133 (51.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 26 LPYSTANSELYA-IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAI 84
L + NS + I N F L +LQ L+ N + + ++F SL + NN +
Sbjct: 90 LQFLLLNSNKFTLIGDNAFIGLSHLQYLFIE-NNDIWALSKFTFRGLKSLTHLSLANNNL 148
Query: 85 TSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFS 143
+LP ++ D L LD++ N CDC ++WL++++A T + +C+ P +F
Sbjct: 149 QTLPRDIFRPLDILSDLDLRGNALNCDCKVKWLVEWLAHTNTTVAPI----YCASPPRFQ 204
Query: 144 NVHLLSNPLLSHISGECVKGALVISQ 169
+ PL +C+ V+ Q
Sbjct: 205 EHKVQDLPLREF---DCITTDFVLYQ 227
>FB|FBgn0010452 [details] [associations]
symbol:trn "tartan" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=TAS] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
InterPro:IPR000372 SMART:SM00013 GO:GO:0007476 GO:GO:0035147
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 FlyBase:FBgn0010452
CTD:38721 EMBL:AY051439 RefSeq:NP_524055.2 UniGene:Dm.2255
SMR:Q9VU51 MINT:MINT-1567723 STRING:Q9VU51
EnsemblMetazoa:FBtr0075890 GeneID:39491 KEGG:dme:Dmel_CG11280
UCSC:CG11280-RA InParanoid:Q9VU51 OMA:RTFAYQK GenomeRNAi:39491
NextBio:813916 Uniprot:Q9VU51
Length = 737
Score = 134 (52.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 37/144 (25%), Positives = 65/144 (45%)
Query: 35 LYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDW 94
L + F + NL+ L + N L + + + LK + NA+TSL L W
Sbjct: 312 LKRVMTGAFSDNGNLEYLNLSSNKMLLEVQEGALSGLSQLKHVVLKANALTSLAEGLFPW 371
Query: 95 DSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS-NPLL 153
L+ LD+ NP +CDC + WL + + + + +++ L C P + L NP +
Sbjct: 372 KDLQTLDLSENPLSCDCRVMWLHNLLVAKNASQDDVS-ELLCEFPERLRGESLRHLNPAM 430
Query: 154 ---SHISG--ECVKGALVISQLST 172
+H + + GAL++ +T
Sbjct: 431 MGCTHADPRKQALIGALLVGSAAT 454
>UNIPROTKB|F1NHS1 [details] [associations]
symbol:F1NHS1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02046435 EMBL:AADN02046436
EMBL:AADN02046437 EMBL:AADN02046438 EMBL:AADN02046439
EMBL:AADN02046440 EMBL:AADN02046441 EMBL:AADN02046442
IPI:IPI00597520 ProteinModelPortal:F1NHS1
Ensembl:ENSGALT00000039424 Uniprot:F1NHS1
Length = 738
Score = 134 (52.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+ + ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 192 TFKYLQL-VDLSNNRISSLSNSSFTNMSQLTTLILSYN-SLQCIPPLAFEGLRSLRLLSL 249
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N I++LP + D SL L I +NP C C+++WL +V K +P + C+
Sbjct: 250 HGNDISTLPEGIFADVTSLSHLAIGANPLYCSCNLRWLSSWV-KTGYKEPGI---ARCAG 305
Query: 139 PVKFSNVHLLSNP 151
P LL+ P
Sbjct: 306 PPDMEGKLLLTTP 318
Score = 127 (49.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 28/97 (28%), Positives = 56/97 (57%)
Query: 29 STANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL- 87
S ++++ ++ K TF +L +QTL N +++ IH SF +++ + +N I+++
Sbjct: 5 SLYDNKIQSLAKGTFTSLRAIQTLMLR-NNRISCIHNDSFTGLRNVRLLSLYDNQISTIA 63
Query: 88 PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
P SL L++ +NP+ C+C + WL D++ KR+
Sbjct: 64 PGAFDTLQSLSTLNLLANPFNCNCQLAWLGDWLRKRK 100
Score = 36 (17.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 142 FSNVHLLSNPLLSHISGECV 161
F+N+ L+ +LS+ S +C+
Sbjct: 214 FTNMSQLTTLILSYNSLQCI 233
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 131 (51.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 31 ANSELYAIRKNTFKNLLN-LQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH 89
+++ L +I N F++ L+TL+ + N L +F +LK ++ NN + LP
Sbjct: 227 SHNPLKSIPDNAFQSFGRYLETLWLD-NTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPS 285
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYV-AKRQRTDPELNYNLHCSQPVKFSNVHL 147
+DSLE L + +NPW C C ++ L ++ AK R D C+ P KF H+
Sbjct: 286 NF-PFDSLETLALTNNPWKCTCQLRGLRRWLEAKASRPDAT------CASPAKFKGQHI 337
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 132 (51.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 33/110 (30%), Positives = 60/110 (54%)
Query: 41 NT-FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGD-WDSLE 98
NT F++L+ L+ LY + N ++ +I +F N SL ++N+N +T+LP + L
Sbjct: 264 NTWFRDLVELEVLYLDRN-RINYIEEGAFENLTSLVSLHLNSNNLTTLPFSVFQPVYFLG 322
Query: 99 VLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLL 148
L + NPW CDC I+WL +++ + L ++ C+ P + + L+
Sbjct: 323 RLYLFRNPWECDCRIEWLKEWMENYR-----LVRDIPCASPSSVAGIDLM 367
>MGI|MGI:2156367 [details] [associations]
symbol:Tlr3 "toll-like receptor 3" species:10090 "Mus
musculus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0002224 "toll-like receptor
signaling pathway" evidence=ISO] [GO:0002282 "microglial cell
activation involved in immune response" evidence=ISO] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006952 "defense
response" evidence=IMP] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=ISO] [GO:0009615
"response to virus" evidence=IMP] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032481 "positive
regulation of type I interferon production" evidence=IDA]
[GO:0032722 "positive regulation of chemokine production"
evidence=ISO] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IDA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISO;IMP;IDA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=ISO] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IDA;IMP] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=ISO]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IDA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IGI;IDA;IMP]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP] [GO:0043331
"response to dsRNA" evidence=ISO] [GO:0045078 "positive regulation
of interferon-gamma biosynthetic process" evidence=ISO] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IMP] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=ISO] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0051607
"defense response to virus" evidence=IGI;TAS] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=ISO] [GO:0071360
"cellular response to exogenous dsRNA" evidence=ISO] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
MGI:MGI:2156367 GO:GO:0016021 GO:GO:0009986 GO:GO:0005789
GO:GO:0043123 GO:GO:0006954 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0004872
GO:GO:0051607 GO:GO:0010008 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 GO:GO:0003725 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 GO:GO:0001934 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0002224
GO:GO:0052033 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0002282 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0071360 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 HOGENOM:HOG000251618 OMA:IANINDD
GO:GO:0045356 GO:GO:0034346 EMBL:AF420279 EMBL:AF355152
EMBL:AK083977 IPI:IPI00320618 RefSeq:NP_569054.2 UniGene:Mm.33874
PDB:3CIG PDB:3CIY PDBsum:3CIG PDBsum:3CIY ProteinModelPortal:Q99MB1
SMR:Q99MB1 STRING:Q99MB1 PhosphoSite:Q99MB1 PaxDb:Q99MB1
PRIDE:Q99MB1 Ensembl:ENSMUST00000034056 Ensembl:ENSMUST00000167106
GeneID:142980 KEGG:mmu:142980 UCSC:uc009loy.1 eggNOG:NOG265249
InParanoid:Q99MB1 EvolutionaryTrace:Q99MB1 NextBio:370067
Bgee:Q99MB1 CleanEx:MM_TLR3 Genevestigator:Q99MB1
GermOnline:ENSMUSG00000031639 Uniprot:Q99MB1
Length = 905
Score = 134 (52.2 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 30/100 (30%), Positives = 55/100 (55%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WDSLEVL 100
FKNL L+++ N L + P+ F++ SL+ + N ITS+ ++ G + +L L
Sbjct: 583 FKNLFELKSINLGLN-NLNKLEPFIFDDQTSLRSLNLQKNLITSVEKDVFGPPFQNLNSL 641
Query: 101 DIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQP 139
D++ NP+ C C SI W ++++ + EL+ + C+ P
Sbjct: 642 DMRFNPFDCTCESISWFVNWINQTHTNISELSTHYLCNTP 681
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 130 (50.8 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 31 ANSELYAIRKNTFKNLLN-LQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH 89
+++ L +I N F++ L+TL+ + N L +F+ +LK +++NN + LP
Sbjct: 226 SHNPLKSIPDNAFQSFGRYLETLWLD-NTNLEKFSDAAFSGVTTLKHVHLDNNRLNQLPS 284
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYV-AKRQRTDPELNYNLHCSQPVKF 142
+D+LE L + +NPW C C ++ L ++ AK R D CS P KF
Sbjct: 285 SF-PFDNLETLTLTNNPWKCTCQLRGLRRWLEAKASRPDAT------CSSPAKF 331
>UNIPROTKB|Q9DEQ5 [details] [associations]
symbol:P37NB "P37NB protein" species:9031 "Gallus gallus"
[GO:0005615 "extracellular space" evidence=IEA] [GO:0045671
"negative regulation of osteoclast differentiation" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615 InterPro:IPR000483
SMART:SM00082 GO:GO:0045671 GeneTree:ENSGT00700000104028 CTD:10234
eggNOG:NOG263968 HOGENOM:HOG000113365 HOVERGEN:HBG052344
OMA:PIQTLDC OrthoDB:EOG4MCX08 EMBL:AADN02036901 EMBL:AADN02036902
EMBL:AADN02036903 EMBL:AJ295847 IPI:IPI00576404
RefSeq:NP_001185529.1 UniGene:Gga.238 Ensembl:ENSGALT00000013512
GeneID:395440 KEGG:gga:395440 InParanoid:Q9DEQ5 NextBio:20815524
Uniprot:Q9DEQ5
Length = 437
Score = 131 (51.2 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 43/149 (28%), Positives = 77/149 (51%)
Query: 21 IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYIN 80
I+K+ L Y+ ++ +R F+++ L+ L N N +T+I P +F+ +L+E ++
Sbjct: 264 IVKLDLSYN----KIRQLRPKEFEDVSELKILNLNSNG-ITYIDPAAFSGLSNLEELDLS 318
Query: 81 NNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYN-LHCSQ 138
NN++ + + L D L+VL ++ NPW CD +I +L Y K ++YN L C
Sbjct: 319 NNSLQNFEYGVLEDLYFLKVLWLRENPWRCDYNIHYLF-YWLKHHYN---VHYNGLECKM 374
Query: 139 PVKFSNVHLLSNPLLSHISGECVKGALVI 167
P ++ + + S+ EC K L I
Sbjct: 375 PEEYKGWSV-GKYVRSYYE-ECPKDKLPI 401
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 133 (51.9 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 25/87 (28%), Positives = 54/87 (62%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ ++L +R +F+ L++L+ L+ + +++ I +F++ +L+E +++N++ SLPH+
Sbjct: 238 SGNQLGVVRPGSFQGLVSLRKLWL-MHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHD 296
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C + WL
Sbjct: 297 LFTPLQQLERVHLNHNPWVCNCDVLWL 323
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 135 (52.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 37/122 (30%), Positives = 62/122 (50%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+N+ + ++ ++F N+ L TL ++N L I +F+ SL+ ++ N I+ LP
Sbjct: 785 SNNRISSLTNSSFTNMSQLTTLILSYNA-LRCIPTLAFSGLRSLRLLSLHGNDISELPDG 843
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
+ D SL L I +NP CDC ++WL D+V K +P + C+ P LL+
Sbjct: 844 IFSDAQSLSHLAIGANPLHCDCGLRWLSDWV-KTGYKEPGI---ARCASPHGMEGKLLLT 899
Query: 150 NP 151
P
Sbjct: 900 TP 901
>RGD|1588563 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] REFSEQ:NM_001106947 Ncbi:NP_001100417
Length = 836
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/120 (34%), Positives = 56/120 (46%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE--LGDWD 95
I TF +L NLQ LY N N L + Y F+ L + NN LP L
Sbjct: 464 ILAGTFDSLPNLQLLYLN-NNLLKSLPVYIFSGA-PLARLNLRNNKFMYLPVSGVLDQLQ 521
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL--LSNPLL 153
SL +D++ NPW C C + L ++ K D + L C PV+F+N+ L L N +L
Sbjct: 522 SLTQIDLEGNPWDCTCDLVALKLWLEKLN--DGIVVKELKCETPVQFANIELKSLKNEIL 579
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 129 (50.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 31 ANSELYAIRKNTFKNLLN-LQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH 89
+++ L +I N F++ L+TL+ + N L +F +LK ++ NN + LP
Sbjct: 229 SHNPLKSIPDNAFQSFGRYLETLWLD-NTNLEKFSDGAFLGVTTLKHVHLENNRLHQLPS 287
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYV-AKRQRTDPELNYNLHCSQPVKFSNVHL 147
+DSLE L + +NPW C C ++ L ++ AK R D C+ P KF H+
Sbjct: 288 NF-PFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSRPDAT------CASPAKFRGQHI 339
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 644 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYN-SLQCIPPLAFQGLRSLRLLSL 701
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N I++L + D SL L I +NP CDC ++WL +V K +P + C+
Sbjct: 702 HGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGYKEPGI---ARCAG 757
Query: 139 PVKFSNVHLLSNP 151
P+ LL+ P
Sbjct: 758 PLDMEGKLLLTTP 770
Score = 127 (49.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 32/115 (27%), Positives = 64/115 (55%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L +IR F+ L L+TL N +++ IH SF
Sbjct: 443 EDGAFEGAASVSELHL---TAN-QLESIRSGMFRGLEGLRTLMLR-NNRISCIHNDSFTG 497
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N I ++ P +L L++ +NP+ C+C + WL D++ KR+
Sbjct: 498 LRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRK 552
Score = 36 (17.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 142 FSNVHLLSNPLLSHISGECV 161
F+N+ L+ +LS+ S +C+
Sbjct: 666 FTNMSQLTTLILSYNSLQCI 685
>UNIPROTKB|E1C0J7 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 EMBL:AADN02019209
IPI:IPI00576786 ProteinModelPortal:E1C0J7
Ensembl:ENSGALT00000009463 Uniprot:E1C0J7
Length = 1411
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PHEL 91
+E+ +I+++ F L +L+ LY +FN L + P +F++ L+ +++NN I+ + P
Sbjct: 108 NEIQSIQQHAFHGLRSLEQLYLHFN-SLETLEPETFSDLPKLERLFLHNNKISRIHPGTF 166
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAK 122
+SL+ L + SN CDC + WL + + K
Sbjct: 167 SQLESLKRLRLDSNALLCDCDLLWLAELLQK 197
>UNIPROTKB|E1C0J1 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 OMA:GGRYECQ
EMBL:AADN02019209 IPI:IPI00599639 ProteinModelPortal:E1C0J1
Ensembl:ENSGALT00000009466 Uniprot:E1C0J1
Length = 1424
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PHEL 91
+E+ +I+++ F L +L+ LY +FN L + P +F++ L+ +++NN I+ + P
Sbjct: 108 NEIQSIQQHAFHGLRSLEQLYLHFN-SLETLEPETFSDLPKLERLFLHNNKISRIHPGTF 166
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAK 122
+SL+ L + SN CDC + WL + + K
Sbjct: 167 SQLESLKRLRLDSNALLCDCDLLWLAELLQK 197
>UNIPROTKB|F1RQ64 [details] [associations]
symbol:LOC100525800 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:TVFVAFC EMBL:CU928352 RefSeq:XP_003135482.1
Ensembl:ENSSSCT00000023710 Ensembl:ENSSSCT00000034435
GeneID:100525800 KEGG:ssc:100525800 Uniprot:F1RQ64
Length = 838
Score = 132 (51.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/120 (33%), Positives = 56/120 (46%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE--LGDWD 95
I TF ++ NLQ LY N N L + Y F+ L + NN LP L
Sbjct: 464 ILAGTFDSMPNLQLLYLN-NNLLKSLPVYIFSGA-PLARLNLRNNKFMYLPVSGVLDQLQ 521
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL--LSNPLL 153
SL +D++ NPW C C + L ++ K D + L C PV+F+N+ L L N +L
Sbjct: 522 SLTQIDLEGNPWDCTCDLVALKLWLEKLN--DGIVVKELRCETPVQFANIELKSLKNEIL 579
>FB|FBgn0029114 [details] [associations]
symbol:Tollo "Tollo" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0007352 "zygotic specification of dorsal/ventral
axis" evidence=IEA] [GO:0006963 "positive regulation of
antibacterial peptide biosynthetic process" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0009620 "response to fungus" evidence=IEA] [GO:0060049
"regulation of protein glycosylation" evidence=IMP] [GO:0048935
"peripheral nervous system neuron development" evidence=IMP]
[GO:0002227 "innate immune response in mucosa" evidence=IMP]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027202
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 EMBL:AE014296 InterPro:IPR003591 SMART:SM00369
GO:GO:0005622 InterPro:IPR000372 SMART:SM00013 GO:GO:0004888
GO:GO:0002227 GO:GO:0048935 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00700000104286 GO:GO:0060049 SUPFAM:SSF52200
PANTHER:PTHR24371:SF0 HSSP:O60603 FlyBase:FBgn0029114 EMBL:AF204158
EMBL:AF247764 EMBL:AY118551 RefSeq:NP_524757.1 UniGene:Dm.3403
SMR:Q9V477 IntAct:Q9V477 MINT:MINT-316842 STRING:Q9V477
EnsemblMetazoa:FBtr0075607 GeneID:44497 KEGG:dme:Dmel_CG6890
UCSC:CG6890-RA CTD:44497 InParanoid:Q9V477 OMA:TIRTHNG
GenomeRNAi:44497 NextBio:837325 Uniprot:Q9V477
Length = 1346
Score = 133 (51.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/120 (33%), Positives = 66/120 (55%)
Query: 9 SRQDISYD-TQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYS 67
SR ++ ++ T Y ++++++ +N +L A+ N F+ L NLQ LY N T I +
Sbjct: 825 SRIEVLHNRTFYGLLELEVLQLQSN-QLKALNGNEFQGLDNLQELYLQHNAIAT-IDTLT 882
Query: 68 FNNDWSLKEFYINNNAITSLP--HELGDWDSLEVLDIQSNPWTCDCS-IQWLIDYVAKRQ 124
F + + LK +++NAITS + L + L L + SNPWTC C I L DY+ + +
Sbjct: 883 FTHLYHLKILRLDHNAITSFAVWNFLPSY--LNELRLASNPWTCSCEFIDKLRDYINRHE 940
>UNIPROTKB|F1NN41 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=IEA]
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0020037 GO:GO:0031012 GO:GO:0004601
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042744 SUPFAM:SSF48113
GO:GO:0005201 Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325
OMA:EPVITWN EMBL:AADN02002863 EMBL:AADN02002864 IPI:IPI00586612
Ensembl:ENSGALT00000026413 Uniprot:F1NN41
Length = 1416
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PHEL 91
+E+ +I + FK L +L+ LY +FN ++ + P SF + L+ +++NN I L P
Sbjct: 56 NEIQSIDRQAFKGLASLEQLYLHFN-QIETLDPESFTHLPKLERLFLHNNRIAHLIPGTF 114
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLID 118
+S++ L + SN CDC I WL +
Sbjct: 115 SHLESMKRLRLDSNALHCDCEILWLAE 141
>UNIPROTKB|F1N5L8 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:DAAA02067886 IPI:IPI00731735 RefSeq:XP_002699658.1
RefSeq:XP_609417.2 Ensembl:ENSBTAT00000015639 GeneID:530936
KEGG:bta:530936 NextBio:20875355 Uniprot:F1N5L8
Length = 837
Score = 131 (51.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 46/153 (30%), Positives = 71/153 (46%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G++ + Y ++ + +Q Y N + I TF ++ NLQ LY N N L +
Sbjct: 433 NGNQIERLYPEMFSGLHNLQYLYLEYNL-IKEILAGTFDSMPNLQLLYLN-NNLLKSLPV 490
Query: 66 YSFNNDWSLKEFYINNNAITSLPHELGDWDSLEVL---DIQSNPWTCDCSIQWLIDYVAK 122
Y F+ L + NN LP G D L+ L D++ NPW C C + L ++ K
Sbjct: 491 YIFSGA-PLARLNLRNNKFMYLPVS-GVLDQLQALTQIDLEGNPWDCTCDLVALKLWLEK 548
Query: 123 RQRTDPELNYNLHCSQPVKFSNVHL--LSNPLL 153
D + L C PV+F+N+ L L N +L
Sbjct: 549 LN--DGIVMKELKCETPVQFANIELKSLKNEIL 579
>MGI|MGI:2442509 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2442509
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:139065 OrthoDB:EOG4VHK5S
EMBL:AB097573 EMBL:AK032263 EMBL:AK039763 EMBL:AK053065
IPI:IPI00396668 RefSeq:NP_848855.2 UniGene:Mm.101707
ProteinModelPortal:Q810B8 SMR:Q810B8 PhosphoSite:Q810B8
PaxDb:Q810B8 PRIDE:Q810B8 Ensembl:ENSMUST00000069926
Ensembl:ENSMUST00000114679 GeneID:245446 KEGG:mmu:245446
InParanoid:Q810B8 ChiTaRS:SLITRK4 NextBio:386707 Bgee:Q810B8
CleanEx:MM_SLITRK4 Genevestigator:Q810B8
GermOnline:ENSMUSG00000046699 Uniprot:Q810B8
Length = 837
Score = 131 (51.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/120 (33%), Positives = 56/120 (46%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE--LGDWD 95
I TF ++ NLQ LY N N L + Y F+ L + NN LP L
Sbjct: 464 ILAGTFDSMPNLQLLYLN-NNLLKSLPVYIFSGA-PLARLNLRNNKFMYLPVSGVLDQLQ 521
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL--LSNPLL 153
SL +D++ NPW C C + L ++ K D + L C PV+F+N+ L L N +L
Sbjct: 522 SLTQIDLEGNPWDCTCDLVALKLWLEKLN--DGIVVKELKCETPVQFANIELKSLKNEIL 579
>MGI|MGI:1924118 [details] [associations]
symbol:Lrrc52 "leucine rich repeat containing 52"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1924118
GO:GO:0016021 GO:GO:0005886 GO:GO:0005216 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104451 CTD:440699 eggNOG:NOG307084
HOGENOM:HOG000233985 HOVERGEN:HBG056592 OMA:YQNARRK
OrthoDB:EOG44MXSK EMBL:BC087947 IPI:IPI00357045
RefSeq:NP_001013400.1 UniGene:Mm.159799 ProteinModelPortal:Q5M8M9
SMR:Q5M8M9 PRIDE:Q5M8M9 Ensembl:ENSMUST00000036643 GeneID:240899
KEGG:mmu:240899 UCSC:uc007dkz.1 InParanoid:Q5M8M9 NextBio:384798
Bgee:Q5M8M9 CleanEx:MM_LRRC52 Genevestigator:Q5M8M9
GermOnline:ENSMUSG00000040485 Uniprot:Q5M8M9
Length = 314
Score = 126 (49.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 39/151 (25%), Positives = 64/151 (42%)
Query: 5 QNSGSRQDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIH 64
QN+ R+ + Y + L S+ N L +I +F L NL L + NP L ++
Sbjct: 85 QNNRIREVMDYTFIGIFRLIYLDLSSNN--LTSISPFSFSVLTNLVRLNISHNPHLLYLD 142
Query: 65 PYSFNNDWSLKEFYINNNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKR 123
Y F N SL+ + N + + H L+ L + NPW C+CS ++
Sbjct: 143 KYVFANTTSLRYLDLRNTGLHIIDHNGFHHLVVLQTLYLSGNPWICNCSFLDFTIHLLVS 202
Query: 124 QRTDPELNYNLHCSQPVKFSN--VHLLSNPL 152
P+ N C++P + + + NPL
Sbjct: 203 HMDHPDAQ-NATCTEPAELKGWPITKVGNPL 232
>MGI|MGI:1923481 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10090 "Mus musculus" [GO:0001503 "ossification"
evidence=ISA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005021 "vascular endothelial growth factor-activated receptor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0042246 "tissue regeneration"
evidence=ISO] [GO:0048010 "vascular endothelial growth factor
receptor signaling pathway" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR009134 PRINTS:PR01832
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1923481 GO:GO:0005524
GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 MEROPS:I43.001 GO:GO:0048010 GO:GO:0005021
GO:GO:0038084 GeneTree:ENSGT00700000104014 CTD:285313
eggNOG:NOG239806 HOVERGEN:HBG107995 OMA:PYVSEDG OrthoDB:EOG45MN4F
EMBL:AC122038 EMBL:AK143421 EMBL:AC135238 EMBL:AK132367
EMBL:AK081990 IPI:IPI00405810 RefSeq:NP_001156356.1
UniGene:Mm.228086 UniGene:Mm.444186 HSSP:P07359
ProteinModelPortal:Q3V1M1 SMR:Q3V1M1 PhosphoSite:Q3V1M1
PRIDE:Q3V1M1 Ensembl:ENSMUST00000039419 GeneID:242050
KEGG:mmu:242050 UCSC:uc008piu.2 InParanoid:Q3V1M1 NextBio:385215
Bgee:Q3V1M1 CleanEx:MM_IGSF10 Genevestigator:Q3V1M1 Uniprot:Q3V1M1
Length = 2594
Score = 134 (52.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 4 KQNSGSRQDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFI 63
K + Q I DT Y + + + N+ + I F L L+ ++ N +LT +
Sbjct: 111 KMSYNKVQIIEKDTLYGLRSLTRLHLDHNN-IEFINPEAFYGLTLLRLVHLEGN-RLTKL 168
Query: 64 HPYSFNNDWSLKEF--------YINNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQ 114
HP +F + L+ F Y+++N +TSLP E+ +LE L + NPWTCDC ++
Sbjct: 169 HPDTFVSLSYLQIFKTSFIKYLYLSDNFLTSLPKEMVSSMPNLESLYLHGNPWTCDCHLK 228
Query: 115 WLIDYV 120
WL +++
Sbjct: 229 WLSEWM 234
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 129 (50.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PH 89
A +++ + TF+ L LQ L+ N L + + SL ++ N + +L P
Sbjct: 131 AGNQINRLEDYTFRGLQRLQELHLQENV-LEVLGDQALVGLSSLALLDLSRNNLRTLSPA 189
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKR-QRTDPELNYNLHCSQPVKFSNVHLL 148
L SL+VL + NPW CDC++ WL ++ + QR + C++P + S++ L+
Sbjct: 190 SLKPLVSLQVLRVTDNPWRCDCALHWLRGWINEEGQRLLSSAERRMLCAEPPRLSHLSLV 249
Query: 149 SNP 151
P
Sbjct: 250 EVP 252
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 132 (51.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+++ + ++F N+ L TL ++N +L I +F+ SL+ ++ N I +P
Sbjct: 768 SNNQISTLSNHSFSNMSELLTLILSYN-RLRCIPAKAFDGLKSLRLLSLHGNDIAVIPDG 826
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
D SL L + +NP CDC +QWL D+V K +P + C+ P ++ LL+
Sbjct: 827 AFKDLSSLSHLALGANPLYCDCHMQWLSDWV-KSGYKEPGI---ARCTGPGDMTDKLLLT 882
Query: 150 NP 151
P
Sbjct: 883 TP 884
>RGD|735030 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10116 "Rattus norvegicus" [GO:0001503 "ossification"
evidence=IDA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042246
"tissue regeneration" evidence=IDA] InterPro:IPR007110
PROSITE:PS50835 RGD:735030 GO:GO:0007275 GO:GO:0005576
GO:GO:0030154 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042246 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0001503 HSSP:Q9BZR6 CTD:285313 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 OrthoDB:EOG45MN4F
EMBL:AY273816 IPI:IPI00400618 RefSeq:NP_942063.1 UniGene:Rn.205647
ProteinModelPortal:Q6WRH9 STRING:Q6WRH9 PhosphoSite:Q6WRH9
PRIDE:Q6WRH9 GeneID:310448 KEGG:rno:310448 UCSC:RGD:735030
InParanoid:Q6WRH9 NextBio:662025 ArrayExpress:Q6WRH9
Genevestigator:Q6WRH9 Uniprot:Q6WRH9
Length = 2597
Score = 133 (51.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 4 KQNSGSRQDISYDTQYTIMK-VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTF 62
K + Q I DT Y + V+L N E I F L +L+ ++ N +LT
Sbjct: 111 KMSYNKVQIIRKDTFYGLGSLVRLHLDHNNIEF--INPEAFYGLTSLRLVHLEGN-RLTK 167
Query: 63 IHPYSFNNDWSLKEF--------YINNNAITSLPHELGDW-DSLEVLDIQSNPWTCDCSI 113
+HP +F + L+ F ++++N +TSLP E+ + +LE L + NPWTCDC +
Sbjct: 168 LHPDTFVSLSYLQIFKTSFIKYLFLSDNFLTSLPKEMVSYMPNLESLYLHGNPWTCDCHL 227
Query: 114 QWLIDYV 120
+WL +++
Sbjct: 228 KWLSEWM 234
>ZFIN|ZDB-GENE-040310-3 [details] [associations]
symbol:rtn4rl1b "reticulon 4 receptor-like 1b"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] ZFIN:ZDB-GENE-040310-3 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000116109 HOVERGEN:HBG063707 KO:K16660
EMBL:BC163592 EMBL:AY263333 IPI:IPI00505158 RefSeq:NP_982347.1
UniGene:Dr.134948 SMR:Q6WZD2 IntAct:Q6WZD2 GeneID:403308
KEGG:dre:403308 CTD:403308 InParanoid:Q6WZD2 NextBio:20816917
Uniprot:Q6WZD2
Length = 478
Score = 127 (49.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
+ L+++ +NTF+ L L L + N +L ++ +F++ L Y+ NN++T L E L
Sbjct: 181 NRLWSLHQNTFRGLGALDRLLLHHN-QLQWVDRLAFHDLRRLTTLYLFNNSLTELAGECL 239
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAK 122
+LE L + NPW CDC L D++ K
Sbjct: 240 TQLPALEYLRLNDNPWECDCKALSLWDWLKK 270
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 131 (51.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/132 (28%), Positives = 66/132 (50%)
Query: 19 YTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFY 78
Y++ K+ L +++ L ++ NTF NL L TL ++N KL + P +FN +L+
Sbjct: 728 YSLTKLDL----SHNRLISLENNTFSNLTRLSTLIISYN-KLRCLQPLAFNGLNALRILS 782
Query: 79 INNNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCS 137
++ N I+ LP + S+ + + SN CDC++ W ++ K + + + C
Sbjct: 783 LHGNDISFLPQSAFSNLTSITHIAVGSNSLYCDCNMAWFSKWI-KSKFIEAGI---ARCE 838
Query: 138 QPVKFSNVHLLS 149
P SN LL+
Sbjct: 839 YPNTVSNQLLLT 850
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 131 (51.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 668 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYNA-LQCIPPLAFQGLRSLRLLSL 725
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N +++L + D SL L I +NP CDC ++WL +V K +P + C+
Sbjct: 726 HGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGYKEPGI---ARCAG 781
Query: 139 PVKFSNVHLLSNP 151
P + LL+ P
Sbjct: 782 PPEMEGKLLLTTP 794
Score = 129 (50.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 32/115 (27%), Positives = 65/115 (56%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L ++R F+ L L+TL N +++ IH SF
Sbjct: 467 EDGTFEGATSVSELHL---TAN-QLESVRSGMFRGLDGLRTLMLR-NNRISCIHNDSFTG 521
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N IT++ P +L L++ +NP+ C+C + WL D++ KR+
Sbjct: 522 LRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRK 576
Score = 127 (49.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 40 KNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSL-- 97
+ F L LQ L N N K+ I P +F + +L + +N I SL G + SL
Sbjct: 260 RGVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAK--GTFTSLRA 316
Query: 98 -EVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+ L + NP+ CDC+++WL D++ RT+P C+ P + +N
Sbjct: 317 IQTLHLAQNPFICDCNLKWLADFL----RTNPIETTGARCASPRRLAN 360
Score = 37 (18.1 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 134 LHCSQPV 140
LHC QPV
Sbjct: 1254 LHCDQPV 1260
Score = 35 (17.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 148 LSNPLLSHISGECVKGALVISQL 170
LSN +S I +GA +S+L
Sbjct: 458 LSNNKVSEIEDGTFEGATSVSEL 480
>UNIPROTKB|F1NEZ4 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:LQADYNY
EMBL:AADN02073144 IPI:IPI00582200 Ensembl:ENSGALT00000014971
Uniprot:F1NEZ4
Length = 831
Score = 129 (50.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 45/151 (29%), Positives = 68/151 (45%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G+ +I Y + + + +Q Y N + I +TF L NL L+ N N L P
Sbjct: 409 NGNYLEILYPSMFDGLQSLQYLYLEYNV-IKEILPHTFDTLSNLHLLFLNNN--LLRSLP 465
Query: 66 YSFNNDWSLKEFYINNNAITSLPHELGDWDSLEVL---DIQSNPWTCDCSIQWLIDYVAK 122
+ SL + NN + LP G D L L D+Q NPW C C I L +++ +
Sbjct: 466 DNVFGGTSLTRLNLRNNHFSHLPVR-GVLDRLSALIQIDLQENPWDCTCDIMGLRNWIEQ 524
Query: 123 -----RQRTDPELNYN-LHCSQPVKFSNVHL 147
Q+++P + N + C P K S HL
Sbjct: 525 VTDQNSQQSNPPVVINEVICESPTKHSGEHL 555
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 131 (51.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 782 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYNA-LQCIPPLAFQGLRSLRLLSL 839
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N +++L + D SL L I +NP CDC ++WL +V K +P + C+
Sbjct: 840 HGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSWV-KTGYKEPGI---ARCAG 895
Query: 139 PVKFSNVHLLSNP 151
P + LL+ P
Sbjct: 896 PPEMEGKLLLTTP 908
Score = 130 (50.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 33/115 (28%), Positives = 65/115 (56%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L +IR F+ L L+TL N +++ IH SF
Sbjct: 581 EDGTFEGAASVSELHL---TAN-QLESIRSGMFRGLDGLRTLMLR-NNRISCIHNDSFTG 635
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N IT++ P +L L++ +NP+ C+C + WL D++ KR+
Sbjct: 636 LRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCHLSWLGDWLRKRK 690
Score = 127 (49.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 40 KNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSL-- 97
+ F L LQ L N N K+ I P +F + +L + +N I SL G + SL
Sbjct: 374 RGVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAK--GTFTSLRA 430
Query: 98 -EVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+ L + NP+ CDC+++WL D++ RT+P C+ P + +N
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFL----RTNPIETTGARCASPRRLAN 474
Score = 37 (18.1 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 134 LHCSQPV 140
LHC QPV
Sbjct: 1368 LHCDQPV 1374
Score = 35 (17.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 148 LSNPLLSHISGECVKGALVISQL 170
LSN +S I +GA +S+L
Sbjct: 572 LSNNKVSEIEDGTFEGAASVSEL 594
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 131 (51.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 782 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYNA-LQCIPPLAFQGLRSLRLLSL 839
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N +++L + D SL L I +NP CDC ++WL +V K +P + C+
Sbjct: 840 HGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGYKEPGI---ARCAG 895
Query: 139 PVKFSNVHLLSNP 151
P + LL+ P
Sbjct: 896 PPEMEGKLLLTTP 908
Score = 129 (50.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/115 (27%), Positives = 65/115 (56%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L ++R F+ L L+TL N +++ IH SF
Sbjct: 581 EDGTFEGATSVSELHL---TAN-QLESVRSGMFRGLDGLRTLMLR-NNRISCIHNDSFTG 635
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N IT++ P +L L++ +NP+ C+C + WL D++ KR+
Sbjct: 636 LRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRK 690
Score = 127 (49.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 40 KNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSL-- 97
+ F L LQ L N N K+ I P +F + +L + +N I SL G + SL
Sbjct: 374 RGVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAK--GTFTSLRA 430
Query: 98 -EVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+ L + NP+ CDC+++WL D++ RT+P C+ P + +N
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFL----RTNPIETTGARCASPRRLAN 474
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 134 LHCSQPV 140
LHC QPV
Sbjct: 1368 LHCDQPV 1374
Score = 35 (17.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 148 LSNPLLSHISGECVKGALVISQL 170
LSN +S I +GA +S+L
Sbjct: 572 LSNNKVSEIEDGTFEGATSVSEL 594
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 131 (51.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 782 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYNA-LQCIPPLAFQGLRSLRLLSL 839
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N +++L + D SL L I +NP CDC ++WL +V K +P + C+
Sbjct: 840 HGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGYKEPGI---ARCAG 895
Query: 139 PVKFSNVHLLSNP 151
P + LL+ P
Sbjct: 896 PPEMEGKLLLTTP 908
Score = 129 (50.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/115 (27%), Positives = 65/115 (56%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L ++R F+ L L+TL N +++ IH SF
Sbjct: 581 EDGTFEGATSVSELHL---TAN-QLESVRSGMFRGLDGLRTLMLR-NNRISCIHNDSFTG 635
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N IT++ P +L L++ +NP+ C+C + WL D++ KR+
Sbjct: 636 LRNVRLLSLYDNHITTISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRK 690
Score = 127 (49.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 40 KNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSL-- 97
+ F L LQ L N N K+ I P +F + +L + +N I SL G + SL
Sbjct: 374 RGVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAK--GTFTSLRA 430
Query: 98 -EVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+ L + NP+ CDC+++WL D++ RT+P C+ P + +N
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFL----RTNPIETTGARCASPRRLAN 474
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 134 LHCSQPV 140
LHC QPV
Sbjct: 1368 LHCDQPV 1374
Score = 35 (17.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 148 LSNPLLSHISGECVKGALVISQL 170
LSN +S I +GA +S+L
Sbjct: 572 LSNNKVSEIEDGTFEGATSVSEL 594
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 125 (49.1 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 31 ANSELYAIRKNTFKNLLN-LQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH 89
+++ L +I N F++ L+TL+ + N L +F +LK ++ NN + LP
Sbjct: 226 SHNPLKSIPDNAFQSFGRYLETLWLD-NTNLEKFSDAAFAGVTTLKHVHLENNRLNQLPS 284
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYV-AKRQRTDPELNYNLHCSQPVKF 142
+D+LE L + +NPW C C ++ L ++ AK R D CS P KF
Sbjct: 285 TF-PFDNLETLTLTNNPWKCTCQLRGLRRWLEAKTSRPDAT------CSSPAKF 331
>UNIPROTKB|F1LN63 [details] [associations]
symbol:Tlr3 "Protein Tlr3" species:10116 "Rattus
norvegicus" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032757 "positive
regulation of interleukin-8 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0034346 "positive
regulation of type III interferon production" evidence=IEA]
[GO:0042346 "positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045078 "positive regulation of
interferon-gamma biosynthetic process" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045359 "positive regulation of
interferon-beta biosynthetic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 RGD:735171 GO:GO:0016021 GO:GO:0005737 GO:GO:0006952
GO:GO:0043123 GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0032722
GO:GO:0032755 GO:GO:0009615 GO:GO:0051092 GO:GO:0032757
GO:GO:0071260 InterPro:IPR000372 SMART:SM00013 GO:GO:0032760
GO:GO:0043330 GO:GO:0032735 GO:GO:0042346 GO:GO:0045078
InterPro:IPR026906 Pfam:PF13306 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 PANTHER:PTHR24365:SF5
GO:GO:0045356 GO:GO:0034346 OMA:WINKTHT IPI:IPI00382156
Ensembl:ENSRNOT00000035781 ArrayExpress:F1LN63 Uniprot:F1LN63
Length = 905
Score = 129 (50.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WDSLEVL 100
FKNL L+++ N L + P F++ SL+ + N ITS+ + G + +L L
Sbjct: 583 FKNLFELKSINLGLN-NLNTLLPSIFDDQTSLRSLNLQKNLITSVEKSVFGPAFHNLNSL 641
Query: 101 DIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
D+ NP+ C C SI W + ++ + PEL+ + C+ P ++
Sbjct: 642 DMSFNPFDCTCESIAWFVTWLNQTHTNIPELSTHYLCNTPQRY 684
>UNIPROTKB|F1S9J3 [details] [associations]
symbol:F1S9J3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0020037 "heme binding" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0004601
"peroxidase activity" evidence=IEA] InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 SMART:SM00214
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 EMBL:FP102317
Ensembl:ENSSSCT00000009470 Uniprot:F1S9J3
Length = 1377
Score = 130 (50.8 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-PHEL 91
+E+ +I + F+ L +L+ LY +F ++ + P SF + L+ +++NN IT L P
Sbjct: 7 NEIQSIDRQAFQGLASLEQLYLHFI-QIETLDPESFQHLPKLERLFLHNNRITYLVPGTF 65
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRT 126
+S++ L + SN CDC I WL D + R+
Sbjct: 66 NHLESMKRLRLDSNALRCDCEILWLADLLKTYARS 100
>UNIPROTKB|E9PGH4 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0032722 "positive regulation
of chemokine production" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0045080
"positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046330
"positive regulation of JNK cascade" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0009986 GO:GO:0043123
GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032755 GO:GO:0004872
GO:GO:0005622 GO:GO:0009615 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 GO:GO:0003725 GO:GO:0051092 GO:GO:0001934
GO:GO:0071346 GO:GO:0035458 GO:GO:0032760 GO:GO:0002224
GO:GO:0052033 GO:GO:0032735 GO:GO:0002282 GO:GO:0032728
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0071360 PANTHER:PTHR24365:SF5
HGNC:HGNC:11849 GO:GO:0034346 EMBL:AC104070 IPI:IPI00966006
ProteinModelPortal:E9PGH4 SMR:E9PGH4 Ensembl:ENST00000504367
ArrayExpress:E9PGH4 Bgee:E9PGH4 Uniprot:E9PGH4
Length = 627
Score = 127 (49.8 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WDSLEVL 100
FK+L L+ + N L + FNN SLK + N ITS+ ++ G + +L L
Sbjct: 305 FKDLFELKIIDLGLN-NLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 363
Query: 101 DIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQP 139
D++ NP+ C C SI W ++++ + PEL+ + C+ P
Sbjct: 364 DMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTP 403
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 130 (50.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 782 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYNA-LQCIPPLAFQGLRSLRLLSL 839
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N I++L + D SL L I +NP CDC ++WL +V K +P + C+
Sbjct: 840 HGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGYKEPGI---ARCAG 895
Query: 139 PVKFSNVHLLSNP 151
P LL+ P
Sbjct: 896 PQDMEGKLLLTTP 908
Score = 127 (49.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 40 KNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSL-- 97
+ F L LQ L N N K+ I P +F + +L + +N I SL G + SL
Sbjct: 374 RGVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAK--GTFTSLRA 430
Query: 98 -EVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+ L + NP+ CDC+++WL D++ RT+P C+ P + +N
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFL----RTNPIETSGARCASPRRLAN 474
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/115 (28%), Positives = 64/115 (55%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L +IR F+ L L+TL N +++ IH SF
Sbjct: 581 EDGAFEGAASVSELHL---TAN-QLESIRSGMFRGLDGLRTLMLR-NNRISCIHNDSFTG 635
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N IT++ P SL L++ +NP+ C+C + WL ++ KR+
Sbjct: 636 LRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRK 690
Score = 36 (17.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 148 LSNPLLSHISGECVKGALVISQL 170
LSN +S I +GA +S+L
Sbjct: 572 LSNNKVSEIEDGAFEGAASVSEL 594
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 125 (49.1 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
+ L + ++ F+ L +L L + N +L +H +F L Y+ NN++ SLP E L
Sbjct: 186 NRLRLLTEHVFRGLGSLDRLLLHGN-RLQGVHRAAFRGLGRLTILYLFNNSLASLPGEAL 244
Query: 92 GDWDSLEVLDIQSNPWTCDC 111
D SLE L + +NPW CDC
Sbjct: 245 ADLPSLEFLRLNANPWACDC 264
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 130 (50.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 782 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYNA-LQCIPPLAFQGLRSLRLLSL 839
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N I++L + D SL L I +NP CDC ++WL +V K +P + C+
Sbjct: 840 HGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGYKEPGI---ARCAG 895
Query: 139 PVKFSNVHLLSNP 151
P LL+ P
Sbjct: 896 PQDMEGKLLLTTP 908
Score = 127 (49.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 40 KNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSL-- 97
+ F L LQ L N N K+ I P +F + +L + +N I SL G + SL
Sbjct: 374 RGVFGGLYTLQLLLLNAN-KINCIRPDAFQDLQNLSLLSLYDNKIQSLAK--GTFTSLRA 430
Query: 98 -EVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+ L + NP+ CDC+++WL D++ RT+P C+ P + +N
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFL----RTNPIETSGARCASPRRLAN 474
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/115 (28%), Positives = 64/115 (55%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L +IR F+ L L+TL N +++ IH SF
Sbjct: 581 EDGAFEGAASVSELHL---TAN-QLESIRSGMFRGLDGLRTLMLR-NNRISCIHNDSFTG 635
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N IT++ P SL L++ +NP+ C+C + WL ++ KR+
Sbjct: 636 LRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRK 690
Score = 36 (17.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 148 LSNPLLSHISGECVKGALVISQL 170
LSN +S I +GA +S+L
Sbjct: 572 LSNNKVSEIEDGAFEGAASVSEL 594
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 127 (49.8 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L IR +F+ L +L+ L+ + +++ I +F++ +L+E +++N++ SLPH+
Sbjct: 220 SGNRLEIIRPGSFQGLESLRKLWL-MHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHD 278
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C + WL
Sbjct: 279 LFTPLQKLERVHLNHNPWVCNCDVLWL 305
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 127 (49.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 35/139 (25%), Positives = 57/139 (41%)
Query: 30 TANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH 89
T L + F NL+ L + N +L + + L + N ++SL
Sbjct: 320 TGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDE 379
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL-- 147
L W L+ LD+ NP+ CDC + WL + R + + C+ P ++ L
Sbjct: 380 GLVPWADLQTLDLSENPFECDCRLLWLRHLLVSRNASGQYAP--VICAYPTALRDLPLAH 437
Query: 148 LSNPLLSHISGECVKGALV 166
L+ PLL G K A++
Sbjct: 438 LAEPLLGCAHGAASKQAII 456
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 124 (48.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
+ L + ++ F+ L +L L + N +L +H +F L Y+ NN++ SLP E L
Sbjct: 189 NRLRLLTEHVFRGLGSLDRLLLHGN-RLQGVHRAAFRGLSRLTILYLFNNSLASLPGEAL 247
Query: 92 GDWDSLEVLDIQSNPWTCDC 111
D SLE L + +NPW CDC
Sbjct: 248 ADLPSLEFLRLNANPWACDC 267
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 129 (50.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 645 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYNA-LQCIPPLAFQGLRSLRLLSL 702
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N I++L + D SL L I +NP CDC ++WL +V K +P + C+
Sbjct: 703 HGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSGWV-KTGYKEPGI---ARCAG 758
Query: 139 PVKFSNVHLLSNP 151
P LL+ P
Sbjct: 759 PPDMEGKLLLTTP 771
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/115 (27%), Positives = 64/115 (55%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L +IR F+ L L+TL N +++ IH SF
Sbjct: 444 EDGAFEGAASVSELHL---TAN-QLESIRSGMFRGLDGLRTLMLR-NNRISCIHNDSFTG 498
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N I ++ P +L L++ +NP+ C+C + WL D++ KR+
Sbjct: 499 LRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRKRK 553
>UNIPROTKB|O15455 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9606 "Homo
sapiens" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0034346 "positive regulation of type III interferon production"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS] [GO:0006972 "hyperosmotic response" evidence=NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IDA;NAS]
[GO:0045671 "negative regulation of osteoclast differentiation"
evidence=NAS] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IDA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IDA]
[GO:0045359 "positive regulation of interferon-beta biosynthetic
process" evidence=IMP;IDA] [GO:0009597 "detection of virus"
evidence=NAS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=IEP] [GO:0042742 "defense response to bacterium"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0010008 "endosome membrane" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0036020 "endolysosome membrane" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0051607 "defense response to virus" evidence=TAS] [GO:0032728
"positive regulation of interferon-beta production" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042346 "positive
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IDA] [GO:0032722
"positive regulation of chemokine production" evidence=IDA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IDA] [GO:0034123
"positive regulation of toll-like receptor signaling pathway"
evidence=IDA] [GO:0032757 "positive regulation of interleukin-8
production" evidence=IDA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IC] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 Reactome:REACT_6900 GO:GO:0000139
GO:GO:0005887 GO:GO:0005789 GO:GO:0043123 GO:GO:0042742
GO:GO:0006954 GO:GO:0046330 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 GO:GO:0032722 GO:GO:0032755 GO:GO:0050729
GO:GO:0051607 GO:GO:0006972 GO:GO:0008584 GO:GO:0043065
GO:GO:0035690 EMBL:CH471056 GO:GO:0003725 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 GO:GO:0071346 GO:GO:0035458
InterPro:IPR000372 SMART:SM00013 GO:GO:0007250 GO:GO:0004888
GO:GO:0032760 GO:GO:0008063 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0052033 GO:GO:0045671 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0002282 GO:GO:0032728
GO:GO:0009597 GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200
GO:GO:0071360 GO:GO:0045359 Orphanet:1930 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 OrthoDB:EOG4N30N8
PANTHER:PTHR24365:SF5 EMBL:U88879 EMBL:DQ445682 EMBL:AB445631
EMBL:BC096333 EMBL:BC096334 EMBL:BC096335 IPI:IPI00019007
RefSeq:NP_003256.1 UniGene:Hs.657724 PDB:1ZIW PDB:2A0Z PDB:3ULU
PDB:3ULV PDBsum:1ZIW PDBsum:2A0Z PDBsum:3ULU PDBsum:3ULV
ProteinModelPortal:O15455 SMR:O15455 DIP:DIP-29660N IntAct:O15455
MINT:MINT-2840066 STRING:O15455 PhosphoSite:O15455 PaxDb:O15455
PRIDE:O15455 Ensembl:ENST00000296795 GeneID:7098 KEGG:hsa:7098
UCSC:uc003iyq.3 GeneCards:GC04P186990 HGNC:HGNC:11849 HPA:CAB025658
MIM:603029 MIM:613002 neXtProt:NX_O15455 PharmGKB:PA36551
HOGENOM:HOG000251618 InParanoid:O15455 OMA:IANINDD PhylomeDB:O15455
ChEMBL:CHEMBL1075113 EvolutionaryTrace:O15455 GenomeRNAi:7098
NextBio:27769 ArrayExpress:O15455 Bgee:O15455 CleanEx:HS_TLR3
Genevestigator:O15455 GermOnline:ENSG00000164342 GO:GO:0036020
GO:GO:0045356 GO:GO:0034346 Uniprot:O15455
Length = 904
Score = 127 (49.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WDSLEVL 100
FK+L L+ + N L + FNN SLK + N ITS+ ++ G + +L L
Sbjct: 582 FKDLFELKIIDLGLN-NLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 640
Query: 101 DIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQP 139
D++ NP+ C C SI W ++++ + PEL+ + C+ P
Sbjct: 641 DMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTP 680
>UNIPROTKB|Q3BBY1 [details] [associations]
symbol:Q3BBY1 "Toll-like receptor 3" species:9544 "Macaca
mulatta" [GO:0003725 "double-stranded RNA binding" evidence=ISS]
[GO:0045078 "positive regulation of interferon-gamma biosynthetic
process" evidence=ISS] [GO:0045356 "positive regulation of
interferon-alpha biosynthetic process" evidence=ISS] [GO:0045359
"positive regulation of interferon-beta biosynthetic process"
evidence=ISS] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
GO:GO:0003725 InterPro:IPR000372 SMART:SM00013 GO:GO:0045078
SUPFAM:SSF52200 GO:GO:0045359 CTD:7098 HOVERGEN:HBG023181 KO:K05401
PANTHER:PTHR24365:SF5 GO:GO:0045356 EMBL:AY864735
RefSeq:NP_001031762.1 UniGene:Mmu.3813 ProteinModelPortal:Q3BBY1
SMR:Q3BBY1 STRING:Q3BBY1 GeneID:574378 KEGG:mcc:574378
InParanoid:Q3BBY1 NextBio:19964208 Uniprot:Q3BBY1
Length = 904
Score = 127 (49.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WDSLEVL 100
FK+L L+ + N L + F+N SLK + N ITS+ ++ G + +L L
Sbjct: 582 FKDLSELKIIDLGLN-NLNTLPASVFDNQVSLKSLNLQKNLITSVEKKVFGPAFRNLSNL 640
Query: 101 DIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQP 139
D++ NP+ C C SI W +++++K PEL+ + C+ P
Sbjct: 641 DMRFNPFDCTCESIAWFVNWISKTHANIPELSSHYLCNTP 680
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 129 (50.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+N+++ ++ +F N+ L TL ++N L I P F SL+ ++ N I+ L +
Sbjct: 791 SNNKISSLTNTSFTNMSQLTTLILSYNA-LRCIPPLVFGGLSSLRLLSLHGNNISELHQQ 849
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
+ D SL L I +NP CDC ++WL D+V K +P + C+ P LL+
Sbjct: 850 IFRDAASLSHLAIGANPLYCDCRLRWLSDWV-KSGYKEPGI---ARCAGPQGMEGKLLLT 905
Query: 150 NP 151
P
Sbjct: 906 TP 907
>UNIPROTKB|Q6WRI0 [details] [associations]
symbol:IGSF10 "Immunoglobulin superfamily member 10"
species:9606 "Homo sapiens" [GO:0001503 "ossification"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 GO:GO:0007275 GO:GO:0005576 GO:GO:0030154
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 HSSP:Q9BZR6 EMBL:AY273815 EMBL:AK093069 EMBL:AK098838
EMBL:BC031063 IPI:IPI00183913 IPI:IPI00478293 IPI:IPI00795608
RefSeq:NP_001171616.1 RefSeq:NP_001171617.1 RefSeq:NP_849144.2
UniGene:Hs.741587 ProteinModelPortal:Q6WRI0 SMR:Q6WRI0
STRING:Q6WRI0 PhosphoSite:Q6WRI0 DMDM:74749492 PaxDb:Q6WRI0
PRIDE:Q6WRI0 Ensembl:ENST00000282466 GeneID:285313 KEGG:hsa:285313
UCSC:uc011bob.2 UCSC:uc011boc.2 UCSC:uc011bod.2 CTD:285313
GeneCards:GC03M151143 HGNC:HGNC:26384 HPA:HPA012921
neXtProt:NX_Q6WRI0 PharmGKB:PA134900760 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 InParanoid:Q6WRI0
OMA:PYVSEDG OrthoDB:EOG45MN4F PhylomeDB:Q6WRI0 GenomeRNAi:285313
NextBio:95425 ArrayExpress:Q6WRI0 Bgee:Q6WRI0 CleanEx:HS_IGSF10
Genevestigator:Q6WRI0 Uniprot:Q6WRI0
Length = 2623
Score = 132 (51.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 4 KQNSGSRQDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFI 63
K + + + DT Y + + + N+ + I F L L+ ++ N +LT +
Sbjct: 111 KMSYNKVRKLQKDTFYGLRSLTRLHMDHNN-IEFINPEVFYGLNFLRLVHLEGN-QLTKL 168
Query: 64 HPYSFNNDWSLKEF--------YINNNAITSLPHELGDW-DSLEVLDIQSNPWTCDCSIQ 114
HP +F + L+ F Y+++N +TSLP E+ + L+ L + NPWTCDC ++
Sbjct: 169 HPDTFVSLSYLQIFKISFIKFLYLSDNFLTSLPQEMVSYMPDLDSLYLHGNPWTCDCHLK 228
Query: 115 WLIDYVAKR 123
WL D++ ++
Sbjct: 229 WLSDWIQEK 237
Score = 35 (17.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 122 KRQRTDPELNYNLHCSQPVKFSNVHLLSNPLLS 154
K+ RTDP N+ Q F+ ++ P+L+
Sbjct: 1352 KKNRTDP----NISPDQSSGFTTPTAMTPPVLT 1380
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 122 (48.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
+ L + ++ F+ L +L L + N +L +H +F+ L Y+ NN++ SLP E L
Sbjct: 189 NRLRLLTEHVFRGLGSLDRLLLHGN-RLQGVHRAAFHGLSRLTILYLFNNSLASLPGEAL 247
Query: 92 GDWDSLEVLDIQSNPWTCDC 111
D +LE L + +NPW CDC
Sbjct: 248 ADLPALEFLRLNANPWACDC 267
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 122 (48.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
+ L + ++ F+ L +L L + N +L +H +F+ L Y+ NN++ SLP E L
Sbjct: 189 NRLRLLTEHVFRGLGSLDRLLLHGN-RLQGVHRAAFHGLSRLTILYLFNNSLASLPGEAL 247
Query: 92 GDWDSLEVLDIQSNPWTCDC 111
D +LE L + +NPW CDC
Sbjct: 248 ADLPALEFLRLNANPWACDC 267
>UNIPROTKB|Q8N0V4 [details] [associations]
symbol:LGI2 "Leucine-rich repeat LGI family member 2"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR009039 PROSITE:PS50912
InterPro:IPR005492 Pfam:PF03736 HOGENOM:HOG000286015
HOVERGEN:HBG036744 EMBL:AF467955 EMBL:AJ487958 EMBL:AJ487516
EMBL:BC101759 EMBL:BC101761 EMBL:AB067503 EMBL:AK001537
IPI:IPI00166085 RefSeq:NP_060646.2 UniGene:Hs.12488
ProteinModelPortal:Q8N0V4 SMR:Q8N0V4 STRING:Q8N0V4
PhosphoSite:Q8N0V4 DMDM:32469740 REPRODUCTION-2DPAGE:Q8N0V4
PaxDb:Q8N0V4 PeptideAtlas:Q8N0V4 PRIDE:Q8N0V4
Ensembl:ENST00000382114 GeneID:55203 KEGG:hsa:55203 UCSC:uc003grf.2
CTD:55203 GeneCards:GC04M025000 HGNC:HGNC:18710 HPA:HPA017140
MIM:608301 neXtProt:NX_Q8N0V4 PharmGKB:PA38654 eggNOG:NOG145837
InParanoid:Q8N0V4 OMA:NTQIFEH OrthoDB:EOG4XSKPN PhylomeDB:Q8N0V4
GenomeRNAi:55203 NextBio:59094 ArrayExpress:Q8N0V4 Bgee:Q8N0V4
CleanEx:HS_LGI2 Genevestigator:Q8N0V4 GermOnline:ENSG00000153012
Uniprot:Q8N0V4
Length = 545
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/165 (27%), Positives = 79/165 (47%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G+ +I D ++ + +QL +NS IR + F L +L+ L+ N K+ I
Sbjct: 70 NGTFSEIK-DRMFSHLPSLQLLLLNSNS-FTIIRDDAFAGLFHLEYLFIEGN-KIETISR 126
Query: 66 YSFNNDWSLKEFYINNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+F L + NN I +LP ++ D DSL LD++ N + CDC +WL ++ +
Sbjct: 127 NAFRGLRDLTHLSLANNHIKALPRDVFSDLDSLIELDLRGNKFECDCKAKWLYLWL---K 183
Query: 125 RTDPELNYNLHCSQPVKFSNVHLLSNPLLSHISGECVKGALVISQ 169
T+ ++ ++ C P ++ L N + S EC V+ Q
Sbjct: 184 MTNSTVS-DVLCIGPPEYQEKKL--NDVTS-FDYECTTTDFVVHQ 224
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/125 (25%), Positives = 64/125 (51%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
Q++ DT + + + N ++ ++ +N F+ L+NL L + N +++ +H SF++
Sbjct: 167 QNLLDDTFIDLANLTYLFLHGN-KIKSLSENVFRGLINLDRLLLHQN-RVSLVHRRSFHD 224
Query: 71 DWSLKEFYINNNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPE 129
+ Y+ NN +T L E + SL+ L + N W CDC + L ++ + + + E
Sbjct: 225 LGKVMTLYLFNNNLTVLTGETMAPLVSLQYLRLNGNQWICDCQARSLWNWFKQFKGSSSE 284
Query: 130 LNYNL 134
L +L
Sbjct: 285 LECHL 289
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GDWDS 96
IR +F L +L+ L+ N +++ I +F+ SL E + +N ++SLPH+L
Sbjct: 232 IRPGSFHGLSSLKKLWV-MNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 290
Query: 97 LEVLDIQSNPWTCDCSIQWL 116
L L + NPW CDC I WL
Sbjct: 291 LVELHLHHNPWNCDCDILWL 310
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GDWDS 96
IR +F L +L+ L+ N +++ I +F+ SL E + +N ++SLPH+L
Sbjct: 232 IRPGSFHGLSSLKKLWV-MNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 290
Query: 97 LEVLDIQSNPWTCDCSIQWL 116
L L + NPW CDC I WL
Sbjct: 291 LVELHLHHNPWNCDCDILWL 310
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GDWDS 96
IR +F L +L+ L+ N +++ I +F+ SL E + +N ++SLPH+L
Sbjct: 233 IRPGSFHGLSSLKKLWV-MNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291
Query: 97 LEVLDIQSNPWTCDCSIQWL 116
L L + NPW CDC I WL
Sbjct: 292 LVELHLHHNPWNCDCDILWL 311
>ZFIN|ZDB-GENE-030131-1731 [details] [associations]
symbol:lgi1a "leucine-rich, glioma inactivated 1a"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007420 "brain development" evidence=IMP] [GO:0007626
"locomotory behavior" evidence=IMP] InterPro:IPR001611
InterPro:IPR011041 PROSITE:PS51450 ZFIN:ZDB-GENE-030131-1731
GO:GO:0007420 GO:GO:0003824 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007626 GO:GO:0008152
InterPro:IPR009039 PROSITE:PS50912 SUPFAM:SSF50952
InterPro:IPR005492 Pfam:PF03736 HOGENOM:HOG000286015
HOVERGEN:HBG036744 GeneTree:ENSGT00390000016191 EMBL:CU570800
EMBL:AY309261 EMBL:CU468780 IPI:IPI00499222 UniGene:Dr.1612
Ensembl:ENSDART00000017854 InParanoid:Q2HPG2 OMA:NALCANT
Uniprot:Q2HPG2
Length = 537
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/105 (28%), Positives = 58/105 (55%)
Query: 30 TANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH 89
TANS +I ++ F L +L+ L+ N ++ I P++F SL + N + +LP
Sbjct: 85 TANS-FDSINEDAFLGLPHLEYLFIE-NNQIKSISPFAFRGLKSLIHLSLAYNNLETLPK 142
Query: 90 EL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYN 133
+L ++L +D++ N ++CDC ++WL+D++ T ++ N
Sbjct: 143 DLFKGMEALTKVDLRGNLFSCDCKLKWLVDWMFHTNATVDQIFCN 187
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 122 (48.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 38/109 (34%), Positives = 53/109 (48%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLP----HELGD 93
I N +LL LQ LY +L+ I PYSF LK +++N +T+L H +G+
Sbjct: 299 IEGNRLHDLLRLQELYL-VGGRLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESVFHSVGN 357
Query: 94 WDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLH---CSQP 139
LE L + NP CDC + W+ R+R LN+N CS P
Sbjct: 358 ---LETLALHDNPLACDCRLLWVF-----RRRW--RLNFNRQQPTCSSP 396
>UNIPROTKB|Q50LG9 [details] [associations]
symbol:LRRC24 "Leucine-rich repeat-containing protein 24"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
EMBL:AB178281 EMBL:AC084125 EMBL:BC111067 IPI:IPI00455850
RefSeq:NP_001019849.2 UniGene:Hs.459391 UniGene:Hs.740859
ProteinModelPortal:Q50LG9 SMR:Q50LG9 DMDM:296434571 PaxDb:Q50LG9
PRIDE:Q50LG9 Ensembl:ENST00000529415 GeneID:441381 KEGG:hsa:441381
UCSC:uc003zdm.3 CTD:441381 GeneCards:GC08M145747 HGNC:HGNC:28947
HPA:HPA037689 neXtProt:NX_Q50LG9 PharmGKB:PA142671520
HOGENOM:HOG000234857 HOVERGEN:HBG079563 InParanoid:Q50LG9
OMA:NITLAHA OrthoDB:EOG4DR9CG GenomeRNAi:441381 NextBio:110128
ArrayExpress:Q50LG9 Bgee:Q50LG9 CleanEx:HS_LRRC24
Genevestigator:Q50LG9 GermOnline:ENSG00000177021 Uniprot:Q50LG9
Length = 513
Score = 121 (47.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
A ++L + TF +L LQ L+ N + + + SL ++ N + ++ E
Sbjct: 130 AGNQLARLLDFTFLHLPRLQELHLQEN-SIELLEDQALAGLSSLALLDLSRNQLGTISRE 188
Query: 91 -LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKR-QRTDPELNYNLHCSQPVKFSNVHLL 148
L SL+VL + NPW CDC++ WL ++ + QR + + C++P + + LL
Sbjct: 189 ALQPLASLQVLRLTENPWRCDCALHWLGAWIKEGGQRLLTSRDRKIMCAEPPRLALQSLL 248
Query: 149 SNPLLSHISGECVKGALVISQL 170
+SH S C+ ++ + L
Sbjct: 249 D---VSHSSLICIPPSVHVQPL 267
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L IR +F+ L +L+ L+ + ++ I +F++ SL+E +++N + SLPH+
Sbjct: 239 SGNRLDLIRPGSFQGLTSLRKLWL-MHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHD 297
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C + WL
Sbjct: 298 LFTPLHRLERVHLNHNPWHCNCDVLWL 324
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L IR +F+ L +L+ L+ + ++ I +F++ SL+E +++N + SLPH+
Sbjct: 239 SGNRLDLIRPGSFQGLTSLRKLWL-MHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHD 297
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C + WL
Sbjct: 298 LFTPLHRLERVHLNHNPWHCNCDVLWL 324
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L IR +F+ L +L+ L+ + ++ I +F++ SL+E +++N + SLPH+
Sbjct: 237 SGNRLDLIRPGSFQGLTSLRKLWL-MHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHD 295
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C + WL
Sbjct: 296 LFTPLHRLERVHLNHNPWHCNCDVLWL 322
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L IR +F+ L +L+ L+ + ++ I +F++ SL+E +++N + SLPH+
Sbjct: 237 SGNRLDLIRPGSFQGLTSLRKLWL-MHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHD 295
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C + WL
Sbjct: 296 LFTPLHRLERVHLNHNPWHCNCDVLWL 322
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 122 (48.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L IR +F+ L +L+ L+ + ++ I +F++ SL+E +++N + SLPH+
Sbjct: 237 SGNRLDLIRPGSFQGLTSLRKLWL-MHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHD 295
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C + WL
Sbjct: 296 LFTPLHRLERVHLNHNPWHCNCDVLWL 322
>UNIPROTKB|F1RZN4 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IEA] [GO:0034138 "toll-like
receptor 3 signaling pathway" evidence=IEA] [GO:0032722 "positive
regulation of chemokine production" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0007165 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 SUPFAM:SSF52200
GeneTree:ENSGT00680000099674 PANTHER:PTHR24365:SF5 EMBL:CU466336
Ensembl:ENSSSCT00000017206 Uniprot:F1RZN4
Length = 902
Score = 123 (48.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/114 (27%), Positives = 57/114 (50%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WD 95
I + F++L L+++ N L + P F+N SLK + N ITS+ + G +
Sbjct: 575 IPADAFRDLSELKSIDLGLN-NLNILPPSVFDNQVSLKSLSLQKNLITSVKKTVFGPAFQ 633
Query: 96 SLEVLDIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLL 148
L LD++ NP+ C C SI W + ++ EL+ + C+ P ++ + ++
Sbjct: 634 KLSNLDMRFNPFDCTCESIAWFVSWINSTHTNISELSSHYLCNTPPQYHGLPVI 687
>UNIPROTKB|A0ENH4 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9823 "Sus
scrofa" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0032722 GO:GO:0032755 GO:GO:0009615
GO:GO:0051092 GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372
SMART:SM00013 GO:GO:0032760 GO:GO:0043330 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 PANTHER:PTHR24365:SF5 GO:GO:0045356
GO:GO:0034346 EMBL:CU466336 EMBL:DQ266435 EMBL:AB291812
RefSeq:NP_001090913.1 UniGene:Ssc.51668 STRING:A0ENH4
Ensembl:ENSSSCT00000017207 GeneID:100037937 KEGG:ssc:100037937
OMA:LNLGYNI Uniprot:A0ENH4
Length = 905
Score = 123 (48.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/114 (27%), Positives = 57/114 (50%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WD 95
I + F++L L+++ N L + P F+N SLK + N ITS+ + G +
Sbjct: 578 IPADAFRDLSELKSIDLGLN-NLNILPPSVFDNQVSLKSLSLQKNLITSVKKTVFGPAFQ 636
Query: 96 SLEVLDIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLL 148
L LD++ NP+ C C SI W + ++ EL+ + C+ P ++ + ++
Sbjct: 637 KLSNLDMRFNPFDCTCESIAWFVSWINSTHTNISELSSHYLCNTPPQYHGLPVI 690
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 122 (48.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + L IR +F+ L +L+ L+ + ++ I +F++ SL+E +++N + SLPH+
Sbjct: 237 SGNRLDLIRPGSFQGLTSLRKLWL-MHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHD 295
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWL 116
L LE + + NPW C+C + WL
Sbjct: 296 LFTPLHRLERVHLNHNPWHCNCDVLWL 322
>UNIPROTKB|B3KTY4 [details] [associations]
symbol:SLITRK2 "cDNA FLJ38959 fis, clone NT2RI2000167,
highly similar to SLIT and NTRK-like protein 2" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL109653 IPI:IPI00410358
RefSeq:NP_001137478.1 RefSeq:NP_001137480.1 RefSeq:NP_001137481.1
RefSeq:NP_001137482.1 RefSeq:NP_115928.1 UniGene:Hs.320368
GeneID:84631 KEGG:hsa:84631 CTD:84631 HGNC:HGNC:13449
PharmGKB:PA134968225 ChiTaRS:SLITRK2 GenomeRNAi:84631 NextBio:74551
OrthoDB:EOG4GTKC9 EMBL:AK096278 EMBL:CH471175 SMR:B3KTY4
STRING:B3KTY4 Ensembl:ENST00000335565 Uniprot:B3KTY4
Length = 724
Score = 122 (48.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G+ ++ Y + + + +Q Y N + I+ TF L+NLQ L+ N N L P
Sbjct: 431 NGNYLEVLYPSMFDGLQSLQYLYLEYNV-IKEIKPLTFDALINLQLLFLNNN--LLRSLP 487
Query: 66 YSFNNDWSLKEFYINNNAITSLPHELGDWDSLEV---LDIQSNPWTCDCSIQWLIDYVAK 122
+ +L + NN + LP + G D L +D+Q NPW C C I L D+
Sbjct: 488 DNIFGGTALTRLNLRNNHFSHLPVK-GVLDQLPAFIQIDLQENPWDCTCDIMGLKDWT-- 544
Query: 123 RQRTDPELNYNLHCSQPVK 141
P + + C P K
Sbjct: 545 EHANSPVIINEVTCESPAK 563
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 126 (49.4 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 40 KNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSL-- 97
+ F L LQ L N N K+ + P +F + +L + +N I SL G + SL
Sbjct: 374 RGVFGGLYTLQLLLLNAN-KINCVRPDAFQDLQNLSLLSLYDNKIQSLAK--GTFTSLRA 430
Query: 98 -EVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+ L + NP+ CDC+++WL D++ RT+P C+ P + +N
Sbjct: 431 IQTLHLAQNPFICDCNLKWLADFL----RTNPIETSGARCASPRRLAN 474
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 20 TIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYI 79
T +QL +N+++ ++ ++F N+ L TL ++N L I P +F SL+ +
Sbjct: 782 TFKYLQL-VDLSNNKISSLSNSSFTNMSQLTTLILSYNA-LQCIPPLAFQGLRSLRLLSL 839
Query: 80 NNNAITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQ 138
+ N I++L + D SL L I +NP CDC ++WL +V K +P + C
Sbjct: 840 HGNDISTLREGIFTDVTSLSHLAIGANPLYCDCHLRWLSSWV-KTGYKEPGI---ARCVG 895
Query: 139 PVKFSNVHLLSNP 151
P LL+ P
Sbjct: 896 PPDMEGKLLLTTP 908
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 31/115 (26%), Positives = 64/115 (55%)
Query: 11 QDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
+D +++ ++ ++ L TAN +L +IR F+ L L+TL N +++ IH SF
Sbjct: 581 EDGAFEGAASVSELHL---TAN-QLESIRSGMFRGLDGLRTLMLR-NNRISCIHNDSFTG 635
Query: 71 DWSLKEFYINNNAITSL-PHELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQ 124
+++ + +N I ++ P +L L++ +NP+ C+C + WL D++ +R+
Sbjct: 636 LRNVRLLSLYDNQIATISPGAFDTLQALSTLNLLANPFNCNCQLAWLGDWLRRRK 690
Score = 36 (17.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 148 LSNPLLSHISGECVKGALVISQL 170
LSN +S I +GA +S+L
Sbjct: 572 LSNNKVSEIEDGAFEGAASVSEL 594
>UNIPROTKB|Q9H156 [details] [associations]
symbol:SLITRK2 "SLIT and NTRK-like protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:Y19205 EMBL:AY358828 EMBL:AK091015
EMBL:AK289732 EMBL:AL109653 EMBL:BC113011 EMBL:BC113012
EMBL:AB058757 IPI:IPI00176104 IPI:IPI00410358 RefSeq:NP_001137475.1
RefSeq:NP_001137476.1 RefSeq:NP_001137477.1 RefSeq:NP_001137478.1
RefSeq:NP_001137480.1 RefSeq:NP_001137481.1 RefSeq:NP_001137482.1
RefSeq:NP_115928.1 UniGene:Hs.320368 ProteinModelPortal:Q9H156
SMR:Q9H156 STRING:Q9H156 PhosphoSite:Q9H156 DMDM:46397026
PaxDb:Q9H156 PRIDE:Q9H156 Ensembl:ENST00000370490
Ensembl:ENST00000413937 Ensembl:ENST00000428560
Ensembl:ENST00000434188 Ensembl:ENST00000447897 GeneID:84631
KEGG:hsa:84631 UCSC:uc004fcd.3 CTD:84631 GeneCards:GC0XP144900
H-InvDB:HIX0017096 H-InvDB:HIX0176721 HGNC:HGNC:13449 HPA:HPA051847
MIM:300561 neXtProt:NX_Q9H156 PharmGKB:PA134968225 eggNOG:NOG147171
InParanoid:Q9H156 OMA:LQADYNY PhylomeDB:Q9H156 ChiTaRS:SLITRK2
GenomeRNAi:84631 NextBio:74551 ArrayExpress:Q9H156 Bgee:Q9H156
CleanEx:HS_SLITRK2 Genevestigator:Q9H156 GermOnline:ENSG00000185985
Uniprot:Q9H156
Length = 845
Score = 122 (48.0 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G+ ++ Y + + + +Q Y N + I+ TF L+NLQ L+ N N L P
Sbjct: 431 NGNYLEVLYPSMFDGLQSLQYLYLEYNV-IKEIKPLTFDALINLQLLFLNNN--LLRSLP 487
Query: 66 YSFNNDWSLKEFYINNNAITSLPHELGDWDSLEV---LDIQSNPWTCDCSIQWLIDYVAK 122
+ +L + NN + LP + G D L +D+Q NPW C C I L D+
Sbjct: 488 DNIFGGTALTRLNLRNNHFSHLPVK-GVLDQLPAFIQIDLQENPWDCTCDIMGLKDWT-- 544
Query: 123 RQRTDPELNYNLHCSQPVK 141
P + + C P K
Sbjct: 545 EHANSPVIINEVTCESPAK 563
>MGI|MGI:2679449 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2679449 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:84631 eggNOG:NOG147171
EMBL:AB097571 EMBL:AK044761 IPI:IPI00329847 RefSeq:NP_001154903.1
RefSeq:NP_942563.2 UniGene:Mm.336081 UniGene:Mm.403134
ProteinModelPortal:Q810C0 SMR:Q810C0 STRING:Q810C0
PhosphoSite:Q810C0 PaxDb:Q810C0 PRIDE:Q810C0
Ensembl:ENSMUST00000036043 Ensembl:ENSMUST00000166241 GeneID:245450
KEGG:mmu:245450 InParanoid:Q810C0 OrthoDB:EOG4GTKC9 NextBio:386711
Bgee:Q810C0 CleanEx:MM_SLITRK2 Genevestigator:Q810C0
GermOnline:ENSMUSG00000036790 Uniprot:Q810C0
Length = 846
Score = 122 (48.0 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G+ ++ Y + + + +Q Y N + I+ TF L+NLQ L+ N N L P
Sbjct: 432 NGNYLEVLYPSMFDGLQSLQYLYLEYNV-IKEIKPLTFDALINLQLLFLNNN--LLRSLP 488
Query: 66 YSFNNDWSLKEFYINNNAITSLPHELGDWDSLEV---LDIQSNPWTCDCSIQWLIDYVAK 122
+ +L + NN + LP + G D L +D+Q NPW C C I L D+
Sbjct: 489 DNIFGGTALTRLNLRNNHFSHLPVK-GVLDQLPAFIQIDLQENPWDCTCDIMGLKDWT-- 545
Query: 123 RQRTDPELNYNLHCSQPVK 141
P + + C P K
Sbjct: 546 EHANSPVIINEVTCESPAK 564
>RGD|1561361 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1561361 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:LQADYNY OrthoDB:EOG4GTKC9
IPI:IPI00361290 Ensembl:ENSRNOT00000015401 Uniprot:D3ZK41
Length = 846
Score = 122 (48.0 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G+ ++ Y + + + +Q Y N + I+ TF L+NLQ L+ N N L P
Sbjct: 432 NGNYLEVLYPSMFDGLQSLQYLYLEYNV-IKEIKPLTFDALINLQLLFLNNN--LLRSLP 488
Query: 66 YSFNNDWSLKEFYINNNAITSLPHELGDWDSLEV---LDIQSNPWTCDCSIQWLIDYVAK 122
+ +L + NN + LP + G D L +D+Q NPW C C I L D+
Sbjct: 489 DNIFGGTALTRLNLRNNHFSHLPVK-GVLDQLPAFIQIDLQENPWDCTCDIMGLKDWT-- 545
Query: 123 RQRTDPELNYNLHCSQPVK 141
P + + C P K
Sbjct: 546 EHANSPVIINEVTCESPAK 564
>UNIPROTKB|O95970 [details] [associations]
symbol:LGI1 "Leucine-rich glioma-inactivated protein 1"
species:9606 "Homo sapiens" [GO:0030054 "cell junction"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030307 "positive regulation of cell growth" evidence=IMP]
[GO:0031175 "neuron projection development" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0050806 "positive
regulation of synaptic transmission" evidence=ISS] [GO:0005615
"extracellular space" evidence=IDA] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] GO:GO:0007411 GO:GO:0005576 GO:GO:0030307
GO:GO:0005615 GO:GO:0008283 GO:GO:0030054 EMBL:CH471066
GO:GO:0051260 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045202 InterPro:IPR000372 SMART:SM00013
GO:GO:0050806 InterPro:IPR009039 PROSITE:PS50912 EMBL:AL157396
InterPro:IPR005492 Pfam:PF03736 CTD:9211 eggNOG:NOG304734
HOVERGEN:HBG036744 EMBL:AF055636 EMBL:AF473548 EMBL:AY358885
EMBL:AK289706 EMBL:AK303956 EMBL:AL358154 EMBL:BC022500
IPI:IPI00021091 IPI:IPI00334395 IPI:IPI00945485 RefSeq:NP_005088.1
UniGene:Hs.533670 ProteinModelPortal:O95970 SMR:O95970
STRING:O95970 PhosphoSite:O95970 PaxDb:O95970 PRIDE:O95970
DNASU:9211 Ensembl:ENST00000371413 Ensembl:ENST00000371418
Ensembl:ENST00000542308 GeneID:9211 KEGG:hsa:9211 UCSC:uc001kjc.4
UCSC:uc010qnv.2 UCSC:uc021pwk.1 GeneCards:GC10P095507
HGNC:HGNC:6572 MIM:600512 MIM:604619 neXtProt:NX_O95970
Orphanet:101046 PharmGKB:PA30349 InParanoid:O95970 OMA:GFANKFI
OrthoDB:EOG4PZJ6C PhylomeDB:O95970 GenomeRNAi:9211 NextBio:34531
Bgee:O95970 CleanEx:HS_LGI1 Genevestigator:O95970
GermOnline:ENSG00000108231 Uniprot:O95970
Length = 557
Score = 120 (47.3 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 36/139 (25%), Positives = 68/139 (48%)
Query: 24 VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNA 83
+QL T+NS I + F L +L+ L+ N + I ++F SL + NN
Sbjct: 93 LQLLLFTSNS-FDVISDDAFIGLPHLEYLFIE-NNNIKSISRHTFRGLKSLIHLSLANNN 150
Query: 84 ITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+ +LP ++ DSL +D++ N + CDC ++WL++++ T ++ +C P ++
Sbjct: 151 LQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDI----YCEGPPEY 206
Query: 143 SNVHLLSNPLLSHISGECV 161
+ S LS +C+
Sbjct: 207 KKRKINS---LSSKDFDCI 222
>UNIPROTKB|Q1EGL2 [details] [associations]
symbol:LGI1 "Leucine-rich glioma-inactivated protein 1"
species:9598 "Pan troglodytes" [GO:0005615 "extracellular space"
evidence=ISS] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISS] GO:GO:0007411 GO:GO:0030307
GO:GO:0005615 GO:GO:0030054 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045202 InterPro:IPR000372
SMART:SM00013 GO:GO:0050806 InterPro:IPR009039 PROSITE:PS50912
InterPro:IPR005492 Pfam:PF03736 CTD:9211 eggNOG:NOG304734
HOGENOM:HOG000286015 HOVERGEN:HBG036744 OMA:GFANKFI
OrthoDB:EOG4PZJ6C GeneTree:ENSGT00390000016191 EMBL:AY615298
RefSeq:NP_001065246.1 UniGene:Ptr.5563 ProteinModelPortal:Q1EGL2
Ensembl:ENSPTRT00000005231 GeneID:450619 KEGG:ptr:450619
InParanoid:Q1EGL2 NextBio:20833433 Uniprot:Q1EGL2
Length = 557
Score = 120 (47.3 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 36/139 (25%), Positives = 68/139 (48%)
Query: 24 VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNA 83
+QL T+NS I + F L +L+ L+ N + I ++F SL + NN
Sbjct: 93 LQLLLFTSNS-FDVISDDAFIGLPHLEYLFIE-NNNIKSISRHTFRGLKSLIHLSLANNN 150
Query: 84 ITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+ +LP ++ DSL +D++ N + CDC ++WL++++ T ++ +C P ++
Sbjct: 151 LQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDI----YCEGPPEY 206
Query: 143 SNVHLLSNPLLSHISGECV 161
+ S LS +C+
Sbjct: 207 KKRKINS---LSSKDFDCI 222
>UNIPROTKB|Q5R945 [details] [associations]
symbol:LGI1 "Leucine-rich glioma-inactivated protein 1"
species:9601 "Pongo abelii" [GO:0005615 "extracellular space"
evidence=ISS] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISS] GO:GO:0005615 GO:GO:0030054
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045202 InterPro:IPR000372 SMART:SM00013 GO:GO:0050806
HSSP:P24014 InterPro:IPR009039 PROSITE:PS50912 InterPro:IPR005492
Pfam:PF03736 CTD:9211 HOVERGEN:HBG036744 EMBL:CR859550
RefSeq:NP_001125996.1 UniGene:Pab.14545 ProteinModelPortal:Q5R945
GeneID:100172937 KEGG:pon:100172937 InParanoid:Q5R945
Uniprot:Q5R945
Length = 557
Score = 120 (47.3 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 36/139 (25%), Positives = 68/139 (48%)
Query: 24 VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNA 83
+QL T+NS I + F L +L+ L+ N + I ++F SL + NN
Sbjct: 93 LQLLLFTSNS-FDVISDDAFIGLPHLEYLFIE-NNNIKSISRHTFRGLKSLIHLSLANNN 150
Query: 84 ITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+ +LP ++ DSL +D++ N + CDC ++WL++++ T ++ +C P ++
Sbjct: 151 LQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDI----YCEGPPEY 206
Query: 143 SNVHLLSNPLLSHISGECV 161
+ S LS +C+
Sbjct: 207 KKRKINS---LSSKDFDCI 222
>ZFIN|ZDB-GENE-090312-22 [details] [associations]
symbol:mxra5 "matrix-remodelling associated 5"
species:7955 "Danio rerio" [GO:0048010 "vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005021 "vascular
endothelial growth factor-activated receptor activity"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 ZFIN:ZDB-GENE-090312-22 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104014 EMBL:BX322647 IPI:IPI00898560
Ensembl:ENSDART00000113486 Uniprot:F1QPU8
Length = 2480
Score = 128 (50.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 32 NSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDW--------SLKEFYINNNA 83
++ L I + F+ L NL+ L+ N +L +HP +F+ +LK Y+++N
Sbjct: 136 HNRLEFIHPDAFQGLTNLRLLHLEGN-QLQQLHPATFSTFSVLGHFPVSTLKHLYLSDNI 194
Query: 84 ITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDY 119
+T+L + L LE L + NPWTCDC ++W ++
Sbjct: 195 LTTLSQKMLASMPYLESLSLHGNPWTCDCRMRWFNEW 231
Score = 36 (17.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 5/8 (62%), Positives = 6/8 (75%)
Query: 202 YARNHVPY 209
Y NH+PY
Sbjct: 1375 YNENHIPY 1382
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 119 (46.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+ + + + + FK L +++++Y N L + + + L+ ++NN++ S+P
Sbjct: 296 SENRISTLAGSVFKGLFSIKSVYLQKN-SLISVDAHLLKDQHDLQLLDLSNNSLRSIPSG 354
Query: 91 L-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP 139
D D V +++ NPW+CDC I + D++ + +L+ + C P
Sbjct: 355 FFEDLDFQCVFELRGNPWSCDCGIHYFYDWLKYNHKHVKDLS-RVSCEAP 403
>UNIPROTKB|F1RQ61 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:FP236785 RefSeq:XP_003135487.1
Ensembl:ENSSSCT00000013911 Ensembl:ENSSSCT00000034054
Ensembl:ENSSSCT00000034972 Ensembl:ENSSSCT00000035609
GeneID:100511615 KEGG:ssc:100511615 Uniprot:F1RQ61
Length = 849
Score = 121 (47.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 39/139 (28%), Positives = 60/139 (43%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G+ ++ Y + + +Q Y N + I+ TF L+NLQ L+ N N L P
Sbjct: 435 NGNYLEVLYPAMFDGLQSLQYLYLEYNV-IKEIKPLTFDALINLQLLFLNNN--LLRSLP 491
Query: 66 YSFNNDWSLKEFYINNNAITSLPHELGDWDSLEV---LDIQSNPWTCDCSIQWLIDYVAK 122
+ +L + NN + LP + G D L +D+Q NPW C C I L D+
Sbjct: 492 DNIFGGTALTRLNLRNNHFSHLPVK-GVLDQLPAFIQIDLQENPWDCTCDIMGLKDWT-- 548
Query: 123 RQRTDPELNYNLHCSQPVK 141
P + + C P K
Sbjct: 549 EHANSPVIINEVTCESPAK 567
>UNIPROTKB|Q86UN2 [details] [associations]
symbol:RTN4RL1 "Reticulon-4 receptor-like 1" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471108 GO:GO:0009986
GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0004872 GO:GO:0045121
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
EMBL:AY250219 EMBL:AF532859 EMBL:BC128608 EMBL:AL834409
EMBL:BK001305 IPI:IPI00328745 RefSeq:NP_848663.1 UniGene:Hs.22917
ProteinModelPortal:Q86UN2 SMR:Q86UN2 STRING:Q86UN2 DMDM:74714017
PRIDE:Q86UN2 Ensembl:ENST00000331238 GeneID:146760 KEGG:hsa:146760
UCSC:uc002ftp.3 CTD:146760 GeneCards:GC17M001786 HGNC:HGNC:21329
HPA:HPA044428 MIM:610461 neXtProt:NX_Q86UN2 PharmGKB:PA134973992
HOGENOM:HOG000116109 HOVERGEN:HBG063707 InParanoid:Q86UN2 KO:K16660
OMA:NCTSHRN OrthoDB:EOG4FXR7G GenomeRNAi:146760 NextBio:85443
Bgee:Q86UN2 CleanEx:HS_RTN4RL1 Genevestigator:Q86UN2
GermOnline:ENSG00000185924 Uniprot:Q86UN2
Length = 441
Score = 118 (46.6 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
++L+++ TF+ L+NL L + N +L ++H +F++ L ++ NN+++ L E L
Sbjct: 183 NKLWSLGPGTFRGLVNLDRLLLHEN-QLQWVHHKAFHDLRRLTTLFLFNNSLSELQGECL 241
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAK 122
+LE L + NPW C C + L +++ +
Sbjct: 242 APLGALEFLRLNGNPWDCGCRARSLWEWLQR 272
>UNIPROTKB|E1BEI7 [details] [associations]
symbol:RTN4RL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:DAAA02048667 IPI:IPI00690499 Ensembl:ENSBTAT00000016317
Uniprot:E1BEI7
Length = 446
Score = 118 (46.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 25/91 (27%), Positives = 54/91 (59%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
++L+++ ++TF+ L+NL L + N +L ++H +F++ L ++ NN+++ LP + L
Sbjct: 183 NKLWSLGQDTFRGLVNLDRLLLHEN-QLQWVHHKAFHDLRRLTTLFLFNNSLSELPGDCL 241
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAK 122
+LE L + N W C C + L +++ +
Sbjct: 242 APLGALEFLRLNGNAWDCGCRARSLWEWLQR 272
>RGD|1560165 [details] [associations]
symbol:Lrrc17 "leucine rich repeat containing 17" species:10116
"Rattus norvegicus" [GO:0005615 "extracellular space"
evidence=IEA;ISO] [GO:0045671 "negative regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0001649 "osteoblast
differentiation" evidence=ISO] [GO:0033687 "osteoblast
proliferation" evidence=ISO] InterPro:IPR001611 PROSITE:PS51450
RGD:1560165 GO:GO:0005615 InterPro:IPR000483 SMART:SM00082
EMBL:CH474020 GO:GO:0045671 GO:GO:0048539
GeneTree:ENSGT00700000104028 CTD:10234 eggNOG:NOG263968
HOGENOM:HOG000113365 HOVERGEN:HBG052344 OMA:PIQTLDC
OrthoDB:EOG4MCX08 EMBL:BC079098 IPI:IPI00189939
RefSeq:NP_001020326.1 UniGene:Rn.207235 Ensembl:ENSRNOT00000017103
GeneID:502715 KEGG:rno:502715 InParanoid:Q6AYD0 NextBio:712245
Genevestigator:Q6AYD0 Uniprot:Q6AYD0
Length = 446
Score = 118 (46.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 21 IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYIN 80
I+K+ L Y+ ++ +R F+++ L+ L + N L FI P +F L+E ++
Sbjct: 275 IVKLDLSYN----KISQLRPKEFEDVHELKKLNLSSNG-LEFIDPAAFLGLIHLEELDLS 329
Query: 81 NNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYN-LHCSQ 138
NN++ S + L D L++L ++ NPW CD SI +L Y K ++YN L C
Sbjct: 330 NNSLQSFDYGVLEDLYFLKLLWLRDNPWRCDYSIHYLY-YWLKHHYN---VHYNGLECKT 385
Query: 139 PVKF 142
P ++
Sbjct: 386 PEEY 389
>UNIPROTKB|E2R6L3 [details] [associations]
symbol:LGI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030307 "positive regulation of cell growth"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] GO:GO:0007411 GO:GO:0030307 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR009039 PROSITE:PS50912 InterPro:IPR005492
Pfam:PF03736 CTD:9211 OMA:GFANKFI GeneTree:ENSGT00390000016191
EMBL:AAEX03015421 EMBL:AAEX03015422 RefSeq:XP_534971.2
Ensembl:ENSCAFT00000012711 GeneID:477777 KEGG:cfa:477777
NextBio:20853198 Uniprot:E2R6L3
Length = 557
Score = 119 (46.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 24 VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNA 83
+QL T+NS I + F L +L+ L+ N + I ++F SL + NN
Sbjct: 93 LQLLLFTSNS-FDVISDDAFIGLPHLEYLFIE-NNNIKSISRHTFRGLKSLIHLSLANNN 150
Query: 84 ITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+ +LP ++ DSL +D++ N + CDC ++WL++++ T ++ +C P ++
Sbjct: 151 LQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDI----YCEGPPEY 206
>UNIPROTKB|F1SC71 [details] [associations]
symbol:LGI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030307 "positive regulation of cell growth"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] GO:GO:0007411 GO:GO:0030307 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR009039
PROSITE:PS50912 InterPro:IPR005492 Pfam:PF03736 OMA:GFANKFI
GeneTree:ENSGT00390000016191 EMBL:CU468486
Ensembl:ENSSSCT00000011469 Uniprot:F1SC71
Length = 557
Score = 119 (46.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 24 VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNA 83
+QL T+NS I + F L +L+ L+ N + I ++F SL + NN
Sbjct: 93 LQLLLFTSNS-FDVISDDAFIGLPHLEYLFIE-NNNIKSISRHTFRGLKSLIHLSLANNN 150
Query: 84 ITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+ +LP ++ DSL +D++ N + CDC ++WL++++ T ++ +C P ++
Sbjct: 151 LQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDI----YCEGPPEY 206
>MGI|MGI:1861691 [details] [associations]
symbol:Lgi1 "leucine-rich repeat LGI family, member 1"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=ISO] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] MGI:MGI:1861691 GO:GO:0007411
GO:GO:0030307 GO:GO:0005615 GO:GO:0030054 GO:GO:0051260
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045202 InterPro:IPR000372 SMART:SM00013 GO:GO:0050806
InterPro:IPR009039 PROSITE:PS50912 InterPro:IPR005492 Pfam:PF03736
CTD:9211 eggNOG:NOG304734 HOGENOM:HOG000286015 HOVERGEN:HBG036744
OMA:GFANKFI OrthoDB:EOG4PZJ6C EMBL:AF246818 EMBL:AK045443
EMBL:BC066090 IPI:IPI00120302 RefSeq:NP_064674.1 UniGene:Mm.298251
ProteinModelPortal:Q9JIA1 SMR:Q9JIA1 IntAct:Q9JIA1 STRING:Q9JIA1
PhosphoSite:Q9JIA1 PaxDb:Q9JIA1 PRIDE:Q9JIA1
Ensembl:ENSMUST00000087252 GeneID:56839 KEGG:mmu:56839
UCSC:uc008hji.1 GeneTree:ENSGT00390000016191 InParanoid:Q9JIA1
NextBio:313387 Bgee:Q9JIA1 CleanEx:MM_LGI1 Genevestigator:Q9JIA1
GermOnline:ENSMUSG00000067242 Uniprot:Q9JIA1
Length = 557
Score = 119 (46.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 24 VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNA 83
+QL T+NS I + F L +L+ L+ N + I ++F SL + NN
Sbjct: 93 LQLLLFTSNS-FDVISDDAFIGLPHLEYLFIE-NNNIKSISRHTFRGLKSLIHLSLANNN 150
Query: 84 ITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+ +LP ++ DSL +D++ N + CDC ++WL++++ T ++ +C P ++
Sbjct: 151 LQTLPKDIFKGLDSLTNVDLRGNAFNCDCKLKWLVEWLGHTNATVEDI----YCEGPPEY 206
>RGD|628742 [details] [associations]
symbol:Lgi1 "leucine-rich, glioma inactivated 1" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005615 "extracellular space" evidence=ISO;ISS;NAS;IDA]
[GO:0007411 "axon guidance" evidence=IEA;ISO] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA;ISO] [GO:0031175 "neuron projection
development" evidence=ISO] [GO:0045202 "synapse" evidence=IEA]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] RGD:628742 GO:GO:0007411 GO:GO:0030307 GO:GO:0005615
GO:GO:0030054 GO:GO:0051260 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045202 InterPro:IPR000372
SMART:SM00013 GO:GO:0050806 InterPro:IPR009039 PROSITE:PS50912
InterPro:IPR005492 Pfam:PF03736 CTD:9211 eggNOG:NOG304734
HOGENOM:HOG000286015 HOVERGEN:HBG036744 OMA:GFANKFI
OrthoDB:EOG4PZJ6C GeneTree:ENSGT00390000016191 EMBL:AJ487517
EMBL:BC089222 IPI:IPI00203726 RefSeq:NP_665712.1 UniGene:Rn.83615
ProteinModelPortal:Q8K4Y5 STRING:Q8K4Y5 PhosphoSite:Q8K4Y5
PRIDE:Q8K4Y5 Ensembl:ENSRNOT00000020411 GeneID:252892
KEGG:rno:252892 UCSC:RGD:628742 InParanoid:Q8K4Y5 NextBio:624001
Genevestigator:Q8K4Y5 GermOnline:ENSRNOG00000014758 Uniprot:Q8K4Y5
Length = 557
Score = 119 (46.9 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 24 VQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNA 83
+QL T+NS I + F L +L+ L+ N + I ++F SL + NN
Sbjct: 93 LQLLLFTSNS-FDVISDDAFIGLPHLEYLFIE-NNNIKSISRHTFRGLKSLIHLSLANNN 150
Query: 84 ITSLPHEL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+ +LP ++ DSL +D++ N + CDC ++WL++++ T ++ +C P ++
Sbjct: 151 LQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDI----YCEGPPEY 206
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 118 (46.6 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
+ + ++ + F+ L +L L + N ++ +HP++F + L Y+ N +++LP E L
Sbjct: 188 NRISSVPERAFRGLHSLDRLLLHQN-RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEAL 246
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFS 143
+L+ L + NPW CDC + L ++ K + + E+ CS P + +
Sbjct: 247 APLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP----CSLPQRLA 294
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 30/113 (26%), Positives = 56/113 (49%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL- 91
+++ I K F L++LQ L N N K+ + +F + SL + +N + ++ L
Sbjct: 179 NKITEIPKGLFDGLVSLQLLLLNAN-KINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLF 237
Query: 92 GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+++ L + NP+ CDC ++WL DY+ + +P CS P + +N
Sbjct: 238 APLQAIQTLHLAQNPFVCDCHLRWLADYL----QDNPIETSGARCSSPRRLAN 286
>FB|FBgn0032484 [details] [associations]
symbol:kek4 "kekkon4" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:P13596 FlyBase:FBgn0032484
EMBL:AF507920 RefSeq:NP_609615.2 UniGene:Dm.417 SMR:Q9VK22
EnsemblMetazoa:FBtr0080485 GeneID:34718 KEGG:dme:Dmel_CG9431
UCSC:CG9431-RA CTD:34718 InParanoid:Q9VK22 OMA:PRIPEDI
GenomeRNAi:34718 NextBio:789865 Uniprot:Q9VK22
Length = 649
Score = 119 (46.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 21 IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYIN 80
+ KV+ + N L A+R F+NL L + N +L I +F L + Y++
Sbjct: 145 LSKVRAIFLNGNL-LQALRHGVFRNLKYLHKIELKRN-RLVSIDAKAFVGVPLLSQIYLD 202
Query: 81 NNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYV 120
NN +T L E D L L + NPW C C +Q D+V
Sbjct: 203 NNELTKLRVESFQDLTKLTALSLVENPWNCTCDLQMFRDFV 243
>UNIPROTKB|E1C125 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:AADN02013465 IPI:IPI00592627 RefSeq:XP_420266.3
Ensembl:ENSGALT00000011717 GeneID:422287 KEGG:gga:422287
Uniprot:E1C125
Length = 837
Score = 120 (47.3 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 39/120 (32%), Positives = 55/120 (45%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE--LGDWD 95
I TF + NLQ LY N N L + Y F L + NN LP L
Sbjct: 464 ILAGTFDLMPNLQLLYLN-NNLLRSLPAYIFAGA-PLARLNLRNNHFMYLPVSGVLDQLK 521
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL--LSNPLL 153
SL +D++ NPW C C + L ++ K ++ + L C PV+F+N+ L L N +L
Sbjct: 522 SLTQIDLEGNPWDCTCDLVALKLWLEKL--SEGIVVKELKCETPVQFANIELRSLKNEIL 579
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 118 (46.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 32/122 (26%), Positives = 62/122 (50%)
Query: 19 YTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFY 78
+T + + + +++ + + ++ F+NL L L + N LT +HP F+N L+
Sbjct: 309 FTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSN-NLTALHPALFHNLSRLQLLN 367
Query: 79 INNNAITSLPHELGDWD-SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCS 137
++ N +T+LP + D + L L + NPW CDC + +L ++ R + N + C+
Sbjct: 368 LSRNQLTTLPGGIFDTNYDLFNLALLGNPWQCDCHLSYLTSWL--RLYNNQISNTHTFCA 425
Query: 138 QP 139
P
Sbjct: 426 GP 427
>MGI|MGI:2445154 [details] [associations]
symbol:Lrrn4 "leucine rich repeat neuronal 4" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0007616
"long-term memory" evidence=IMP] [GO:0008542 "visual learning"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2445154 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:AL831763
GeneTree:ENSGT00530000064159 CTD:164312 eggNOG:NOG42368
HOVERGEN:HBG051176 OMA:QNCNLSS OrthoDB:EOG4S7JPF EMBL:AK085246
EMBL:AK080889 EMBL:AL929562 IPI:IPI00230402 RefSeq:NP_796277.2
UniGene:Mm.386903 ProteinModelPortal:P59383 SMR:P59383 PRIDE:P59383
DNASU:320974 Ensembl:ENSMUST00000049787 GeneID:320974
KEGG:mmu:320974 InParanoid:A2ANX0 NextBio:397786 Bgee:P59383
Genevestigator:P59383 GermOnline:ENSMUSG00000043110 Uniprot:P59383
Length = 733
Score = 119 (46.9 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 39/129 (30%), Positives = 58/129 (44%)
Query: 35 LYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDW 94
L + + FK NL+ L C +P LT +H F + +L+ N ++S G W
Sbjct: 243 LKTLEGDIFKMTPNLRQLDCGDSPALTSVHTEIFQDTPNLQVLQFQNCNLSSF----GPW 298
Query: 95 DSLEVLDIQ--SNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLSNPL 152
+S +VL + NP C C + WL+ V K T + C +P + S PL
Sbjct: 299 NSSQVLSVSLFGNPLICSCELAWLLVDVNK---TVLHRAADTMC-EPA-LGSTGPFSGPL 353
Query: 153 -LSHISGEC 160
LSH+S C
Sbjct: 354 SLSHLSNVC 362
>UNIPROTKB|Q5E9T6 [details] [associations]
symbol:LGI1 "Leucine-rich glioma-inactivated protein 1"
species:9913 "Bos taurus" [GO:0005615 "extracellular space"
evidence=ISS] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISS] [GO:0045202 "synapse" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] GO:GO:0005615
GO:GO:0030054 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045202 InterPro:IPR000372 SMART:SM00013
GO:GO:0050806 HSSP:P24014 InterPro:IPR009039 PROSITE:PS50912
InterPro:IPR005492 Pfam:PF03736 EMBL:BT020834 IPI:IPI00710591
RefSeq:NP_001040056.2 UniGene:Bt.35117 ProteinModelPortal:Q5E9T6
PRIDE:Q5E9T6 GeneID:617080 KEGG:bta:617080 CTD:9211
eggNOG:NOG304734 HOGENOM:HOG000286015 HOVERGEN:HBG036744
NextBio:20900475 Uniprot:Q5E9T6
Length = 533
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 34/133 (25%), Positives = 66/133 (49%)
Query: 30 TANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH 89
T+NS I + F L +L+ L+ N + I ++F SL + NN + +LP
Sbjct: 75 TSNS-FDVISDDAFIGLPHLEYLFIE-NNNIKSISRHTFRGLKSLIHLSLANNNLQTLPK 132
Query: 90 EL-GDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLL 148
++ DSL +D++ N + CDC ++WL+++++ T ++ +C P ++ +
Sbjct: 133 DIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLSHTNATVEDI----YCEGPPEYKKRKIN 188
Query: 149 SNPLLSHISGECV 161
S LS +C+
Sbjct: 189 S---LSSKDFDCI 198
>WB|WBGene00019351 [details] [associations]
symbol:lron-7 species:6239 "Caenorhabditis elegans"
[GO:0004623 "phospholipase A2 activity" evidence=IEA] [GO:0006644
"phospholipid metabolic process" evidence=IEA] [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:FO081579 GeneID:180991 KEGG:cel:CELE_K03A1.2
CTD:180991 GeneTree:ENSGT00690000102720 PIR:T34319
RefSeq:NP_509227.2 ProteinModelPortal:Q21164 SMR:Q21164
STRING:Q21164 PRIDE:Q21164 EnsemblMetazoa:K03A1.2a.1
EnsemblMetazoa:K03A1.2a.2 UCSC:K03A1.2b.1 WormBase:K03A1.2a
HOGENOM:HOG000004765 InParanoid:Q21164 OMA:EIRDHAF NextBio:911890
ArrayExpress:Q21164 Uniprot:Q21164
Length = 586
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 35 LYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSF--------NNDWSLKEFYINNNAITS 86
L +R F L L+TL N N L +HP +F + ++ I+N+ I++
Sbjct: 385 LTVVRDCGFCGLPQLKTLILNDNKYLQELHPNAFGYIKSQPGHKSAAITSLQIHNSNIST 444
Query: 87 LPHELGDWDSLEVLDIQSNPWTCDCSIQWLID--YVAKRQRTDPE 129
+ + D+D+L+ + NPW C+C Q++++ + K+ P+
Sbjct: 445 ISEHMVDYDNLKTFQVGGNPWNCNCDTQFMLEEKFAFKQDSVAPK 489
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 37 AIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LGDWD 95
++ ++ F+ L +L L + N + +HP++F + L Y+ N ++ LP E L
Sbjct: 192 SVPEHAFRGLHSLDRLLLHQN-HVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLMPLR 250
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNL 134
SL+ L + NPW CDC + L ++ K + + E+ NL
Sbjct: 251 SLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCNL 289
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 37 AIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LGDWD 95
++ ++ F+ L +L L + N + +HP++F + L Y+ N ++ LP E L
Sbjct: 192 SVPEHAFRGLHSLDRLLLHQN-HVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLR 250
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNL 134
SL+ L + NPW CDC + L ++ K + + E+ NL
Sbjct: 251 SLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCNL 289
>FB|FBgn0085397 [details] [associations]
symbol:Fili "Fish-lips" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
InterPro:IPR001611 PROSITE:PS51450 EMBL:AE013599 GO:GO:0016021
GO:GO:0042981 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0007476 GeneTree:ENSGT00700000104286 EMBL:BT015985
RefSeq:NP_001097402.1 UniGene:Dm.32432 SMR:Q5U1A7 STRING:Q5U1A7
EnsemblMetazoa:FBtr0112593 EnsemblMetazoa:FBtr0330338
GeneID:5740472 KEGG:dme:Dmel_CG34368 UCSC:CG34368-RC CTD:5740472
FlyBase:FBgn0085397 InParanoid:Q5U1A7 OMA:KEADDEP OrthoDB:EOG4H9W1T
GenomeRNAi:5740472 NextBio:20891510 Uniprot:Q5U1A7
Length = 738
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 35 LYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDW 94
L I F + +LQTL+ N NP+L+ I F + ++ E Y+ +N++ +L
Sbjct: 325 LQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPV 384
Query: 95 DSLEVLDIQSNPWTCDCSIQWLIDYVAKR-QRTDPELNY 132
D L+ L + NP C+CS+ WL V + DP + +
Sbjct: 385 DQLQKLYLGDNPLQCNCSLLWLWRLVTGNFEGVDPGMEH 423
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 112 (44.5 bits), Expect = 0.00018, P = 0.00018
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 33 SELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-L 91
+ L A+ + F+ L +L L + N +L +H +F L Y+ NN++ +LP + L
Sbjct: 184 NRLRALSEGVFRGLPSLDRLLLHAN-RLATVHRRAFRGLARLTILYLFNNSLAALPGDPL 242
Query: 92 GDWDSLEVLDIQSNPWTCDC 111
+L+ L + +NPW CDC
Sbjct: 243 AALPALQFLRLNANPWACDC 262
>UNIPROTKB|Q9NR99 [details] [associations]
symbol:MXRA5 "Matrix-remodeling-associated protein 5"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:Q9BZR6 eggNOG:NOG239806 EMBL:AF245505 EMBL:AC004616
EMBL:BC011846 EMBL:BC064986 EMBL:BC080586 EMBL:AL049946
IPI:IPI00012347 PIR:T08678 RefSeq:NP_056234.2 UniGene:Hs.369422
ProteinModelPortal:Q9NR99 STRING:Q9NR99 PhosphoSite:Q9NR99
DMDM:117949607 PaxDb:Q9NR99 PRIDE:Q9NR99 Ensembl:ENST00000217939
Ensembl:ENST00000381114 GeneID:25878 KEGG:hsa:25878 UCSC:uc004crg.4
CTD:25878 GeneCards:GC0XM003220 H-InvDB:HIX0016637 HGNC:HGNC:7539
HPA:HPA000508 neXtProt:NX_Q9NR99 PharmGKB:PA31340
HOGENOM:HOG000168306 InParanoid:Q9NR99 OMA:GALMTPN
OrthoDB:EOG4B5P48 PhylomeDB:Q9NR99 GenomeRNAi:25878 NextBio:47288
Bgee:Q9NR99 CleanEx:HS_MXRA5 Genevestigator:Q9NR99
GermOnline:ENSG00000101825 Uniprot:Q9NR99
Length = 2828
Score = 126 (49.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 30/100 (30%), Positives = 54/100 (54%)
Query: 32 NSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN----DW----SLKEFYINNNA 83
++++ I F L +L+ L+ N L +HP +F+ D+ +++ Y+ N
Sbjct: 136 HNKIEFIHPQAFNGLTSLRLLHLEGN-LLHQLHPSTFSTFTFLDYFRLSTIRHLYLAENM 194
Query: 84 ITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAK 122
+ +LP L + LE L +Q NPWTCDC ++W +++ AK
Sbjct: 195 VRTLPASMLRNMPLLENLYLQGNPWTCDCEMRWFLEWDAK 234
Score = 35 (17.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 151 PLLSHISGECVKGALVISQLSTQ 173
P SH+ G LV S LSTQ
Sbjct: 1029 PGQSHLQGLTDNIHLVKSSLSTQ 1051
>UNIPROTKB|E2RFX7 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 OMA:YFELKAN EMBL:AAEX03013284
RefSeq:XP_003639854.1 Ensembl:ENSCAFT00000008522 GeneID:100856466
KEGG:cfa:100856466 NextBio:20859498 Uniprot:E2RFX7
Length = 840
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 40/124 (32%), Positives = 56/124 (45%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLP--HELGDWD 95
I TF + L+ LY N N L + P+ F+ SL + N T LP + L D D
Sbjct: 450 ILPGTFNPMPKLKVLYLN-NNLLQVLPPHIFSGV-SLTRINLKTNQFTHLPVSNILDDLD 507
Query: 96 SLEVLDIQSNPWTCDCSI----QWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL--LS 149
L +D++ NPW C C + QWL ++K TD L C+ P L L+
Sbjct: 508 LLTQIDLEDNPWDCSCDLVGLQQWL-QKLSKNTVTDDIL-----CTSPEHLDKKELKALT 561
Query: 150 NPLL 153
+ LL
Sbjct: 562 SELL 565
>UNIPROTKB|G3N2N1 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:DAAA02067944 RefSeq:XP_002699667.1
RefSeq:XP_591589.3 UniGene:Bt.78166 Ensembl:ENSBTAT00000057033
GeneID:540117 KEGG:bta:540117 NextBio:20878426 Uniprot:G3N2N1
Length = 844
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 38/139 (27%), Positives = 60/139 (43%)
Query: 7 SGSRQDISYDTQYT-IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHP 65
+G+ ++ + + + +Q Y N + I+ TF L+NLQ L+ N N L P
Sbjct: 431 NGNYLEVLFPAMFDGLQSLQYLYLEYNV-IKEIKPLTFDALINLQLLFLNNN--LLRSLP 487
Query: 66 YSFNNDWSLKEFYINNNAITSLPHELGDWDSLEV---LDIQSNPWTCDCSIQWLIDYVAK 122
+ +L + NN + LP + G D L +D+Q NPW C C I L D+
Sbjct: 488 DNIFGGTALTRLNLRNNHFSHLPVK-GVLDQLPAFIQIDLQENPWDCTCDIMGLKDWT-- 544
Query: 123 RQRTDPELNYNLHCSQPVK 141
P + + C P K
Sbjct: 545 EHANSPVIINEVTCESPAK 563
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 117 (46.2 bits), Expect = 0.00020, P = 0.00020
Identities = 30/103 (29%), Positives = 53/103 (51%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WDSLEVL 100
FK+L L+++ N L + F+N SLK + N ITS+ + G + +L L
Sbjct: 583 FKDLRELKSIDLGMN-NLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYL 641
Query: 101 DIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
D++ NP+ C C SI W ++++ EL+ + C+ P ++
Sbjct: 642 DMRFNPFDCTCESIAWFVNWINSTHTNISELSNHYLCNTPPQY 684
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 32/123 (26%), Positives = 63/123 (51%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPH- 89
+N+ + + TF N+ L TL ++N ++ + ++F+ SL+ ++ N ++++P
Sbjct: 776 SNNSISHLAPLTFSNMTQLATLILSYN-QIRCVPVHAFDGLRSLRLLTLHGNDLSTVPEG 834
Query: 90 ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLS 149
SL L + +NP CDC ++WL +V K +P + C+ P ++ LL+
Sbjct: 835 AFNHLTSLSHLALGANPLYCDCELRWLSQWV-KAGFKEPGI---ARCTGPPDMADRLLLT 890
Query: 150 NPL 152
PL
Sbjct: 891 TPL 893
>MGI|MGI:1914123 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10090 "Mus musculus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=ISO]
[GO:0045087 "innate immune response" evidence=IEA] [GO:0046696
"lipopolysaccharide receptor complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914123 GO:GO:0016021
GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 InterPro:IPR000372
SMART:SM00013 HSSP:Q9BZR6 GeneTree:ENSGT00700000104056 Pfam:PF01463
CTD:9865 HOVERGEN:HBG066060 EMBL:AK122338 EMBL:AK004681
EMBL:AK033401 EMBL:AK051421 EMBL:BC043099 EMBL:BC059224
IPI:IPI00469248 RefSeq:NP_080093.1 UniGene:Mm.422727
UniGene:Mm.475802 UniGene:Mm.480530 ProteinModelPortal:Q9DBY4
SMR:Q9DBY4 STRING:Q9DBY4 PRIDE:Q9DBY4 Ensembl:ENSMUST00000127748
GeneID:66873 KEGG:mmu:66873 UCSC:uc009bzk.2 OMA:EFPCDRF
OrthoDB:EOG4KWJSW NextBio:322893 Bgee:Q9DBY4 Genevestigator:Q9DBY4
Uniprot:Q9DBY4
Length = 809
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 46 LLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GDWDSLEVLDIQS 104
L +L+ L + N +L+ +HP +F + L+E + +NA+++L ++ +L LD+
Sbjct: 300 LHSLEALDLSGN-ELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDG 358
Query: 105 NPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL--LSNPLLSHISGECV 161
N WTCDC ++ L ++ L + C P +L L + LL + G CV
Sbjct: 359 NGWTCDCRLRGLKRWMGNWHSQGRLLTVFVQCRHPPALRGKYLDYLDDQLLQN--GSCV 415
>RGD|1310827 [details] [associations]
symbol:Tril "TLR4 interactor with leucine-rich repeats"
species:10116 "Rattus norvegicus" [GO:0001530 "lipopolysaccharide
binding" evidence=ISO] [GO:0002718 "regulation of cytokine
production involved in immune response" evidence=ISO] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310827 GO:GO:0016021 GO:GO:0006954 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0045087 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 Pfam:PF01463 HSSP:P07359 CTD:9865
HOVERGEN:HBG066060 OMA:EFPCDRF OrthoDB:EOG4KWJSW EMBL:BC100659
IPI:IPI00358213 RefSeq:NP_001029182.1 UniGene:Rn.25045
STRING:Q496Z2 Ensembl:ENSRNOT00000036951 GeneID:362364
KEGG:rno:362364 UCSC:RGD:1310827 InParanoid:Q496Z2 NextBio:679662
Genevestigator:Q496Z2 Uniprot:Q496Z2
Length = 811
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 46 LLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GDWDSLEVLDIQS 104
L +L+ L + N +L+ +HP +F + L+E + +NA+++L ++ +L LD+
Sbjct: 300 LHSLEALDLSGN-ELSALHPATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDG 358
Query: 105 NPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHL--LSNPLLSHISGECV 161
N WTCDC ++ L ++ L + C P +L L + LL + G CV
Sbjct: 359 NGWTCDCRLRGLKRWMGNWHSQGRLLTVFVQCRHPPALRGKYLDYLDDQLLQN--GSCV 415
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 40 KNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHELGDWDSL-- 97
K F L LQ L N N K+ + +F + +L + +N I SL G + SL
Sbjct: 387 KGVFGGLFALQLLLLNAN-KINCVRADAFQDLQNLSLLSLYDNKIQSLAK--GTFTSLRA 443
Query: 98 -EVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSN 144
+ L + NP+ CDC+++WL D++ R +P C+ P + +N
Sbjct: 444 IQTLHLAQNPFVCDCNLKWLADFL----RANPIETSGARCASPRRLAN 487
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 32/111 (28%), Positives = 60/111 (54%)
Query: 30 TANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-P 88
T+N L ++ FK L +L+TL N +++ + SF S++ + +N IT++ P
Sbjct: 500 TSN-RLENVQHKMFKGLESLKTLMLRSN-RISCVGNDSFTGLGSVRLLSLYDNQITTVAP 557
Query: 89 HELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP 139
G SL L++ +NP+ C+C + WL +++ +R+R + N C +P
Sbjct: 558 GAFGTLHSLSTLNLLANPFNCNCHLAWLGEWL-RRKRI---VTGNPRCQKP 604
>MGI|MGI:2444885 [details] [associations]
symbol:Lrit2 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2444885 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HSSP:P07359 GeneTree:ENSGT00700000104028 CTD:340745
HOGENOM:HOG000082676 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
eggNOG:NOG331103 EMBL:BC057628 IPI:IPI00277844 RefSeq:NP_775594.1
UniGene:Mm.134302 ProteinModelPortal:Q6PFC5 SMR:Q6PFC5 PRIDE:Q6PFC5
Ensembl:ENSMUST00000057176 GeneID:239038 KEGG:mmu:239038
UCSC:uc007tbs.1 InParanoid:Q6PFC5 OMA:HIGPGIN NextBio:383967
Bgee:Q6PFC5 Genevestigator:Q6PFC5 Uniprot:Q6PFC5
Length = 549
Score = 84 (34.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 32 NSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE- 90
NS L+ + + F N+ +L+ L+ NFN +T IH + + L+E + N + S+P
Sbjct: 64 NSPLFELSQGFFTNMSSLEYLWLNFN-NVTVIHLGALEDLPELRELRLEGNKLRSVPWTA 122
Query: 91 LGDWDSLEVLDIQSN 105
L VLD++ N
Sbjct: 123 FRATPLLRVLDLKHN 137
Score = 72 (30.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 99 VLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPV 140
VL + +NPW CDC ++ L +V +N L C PV
Sbjct: 194 VLSLHNNPWLCDCRLRGLAQFVKSVGPPFILVNSYLVCQGPV 235
>RGD|1561300 [details] [associations]
symbol:Nyx "nyctalopin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] RGD:1561300
GO:GO:0007601 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 KO:K08129 OrthoDB:EOG43JC4W
GeneTree:ENSGT00690000101803 EMBL:CH474009 EMBL:DQ393414
IPI:IPI00858403 RefSeq:NP_001094437.1 UniGene:Rn.153545
Ensembl:ENSRNOT00000013382 GeneID:302516 KEGG:rno:302516
UCSC:RGD:1561300 InParanoid:A1XIQ3 NextBio:649772
Genevestigator:A1XIQ3 Uniprot:A1XIQ3
Length = 476
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 35 LYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LGD 93
L ++ + F +L L+ LY + N +TF+ +F N L ++N N +T L
Sbjct: 261 LGSVARGWFSDLAELELLYLDRN-SITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAFQP 319
Query: 94 WDSLEVLDIQSNPWTCDCSIQWLIDYV 120
L L + NPW CDC ++WL D++
Sbjct: 320 GFFLGRLFLFRNPWRCDCHLEWLRDWM 346
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 32/111 (28%), Positives = 60/111 (54%)
Query: 30 TANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSL-P 88
T+N L ++ FK L +L+TL N +++ + SF S++ + +N IT++ P
Sbjct: 586 TSN-RLENVQHKMFKGLESLKTLMLRSN-RISCVGNDSFTGLGSVRLLSLYDNQITTVAP 643
Query: 89 HELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP 139
G SL L++ +NP+ C+C + WL +++ +R+R + N C +P
Sbjct: 644 GAFGTLHSLSTLNLLANPFNCNCHLAWLGEWL-RRKRI---VTGNPRCQKP 690
>ZFIN|ZDB-GENE-040924-5 [details] [associations]
symbol:lrit1a "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1a" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-040924-5 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG108105 EMBL:BC095674 IPI:IPI00498659 UniGene:Dr.82959
ProteinModelPortal:Q502J4 InParanoid:Q502J4 Uniprot:Q502J4
Length = 643
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 47/163 (28%), Positives = 79/163 (48%)
Query: 7 SGSRQDISYDTQYTIMKVQLPYSTANS--ELYAIRK---NTFKNLLNLQTLYCNFNPKLT 61
S +R I D + +++ P T+ E AI++ F L NL+ L+ +FN L+
Sbjct: 38 SRARSVICNDPEISLVPASFPGDTSKLRIEKTAIKRIPSEAFSYLSNLEFLWMSFNV-LS 96
Query: 62 FIHPYSFNNDWSLKEFYINNNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYV 120
++ SF +SL+E ++ N+++S P E L D SL +LDI +N + S L Y+
Sbjct: 97 SLNSDSFRGLYSLEELRLDGNSLSSFPWESLMDMPSLRLLDIHNNQLSSLPSEAAL--YM 154
Query: 121 AKRQRTDPELNYNLHCSQPVKFSNVHLLSNPLLSHISGECVKG 163
+ T +L+ N + P + N L P L S + + G
Sbjct: 155 --KNITYLDLSSNNLLTVPAEVLNTWLTIKPTLGAESSKLILG 195
>UNIPROTKB|Q2HJ31 [details] [associations]
symbol:LRRC17 "Leucine rich repeat containing 17"
species:9913 "Bos taurus" [GO:0048539 "bone marrow development"
evidence=IEA] [GO:0045671 "negative regulation of osteoclast
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0045671 GO:GO:0048539
GeneTree:ENSGT00700000104028 CTD:10234 eggNOG:NOG263968
HOGENOM:HOG000113365 HOVERGEN:HBG052344 OMA:PIQTLDC
OrthoDB:EOG4MCX08 EMBL:DAAA02010505 EMBL:BC113338 EMBL:BT030519
IPI:IPI00704007 RefSeq:NP_001071618.1 UniGene:Bt.4886
Ensembl:ENSBTAT00000033775 GeneID:777690 KEGG:bta:777690
InParanoid:Q2HJ31 NextBio:20924262 Uniprot:Q2HJ31
Length = 441
Score = 112 (44.5 bits), Expect = 0.00033, P = 0.00033
Identities = 40/147 (27%), Positives = 72/147 (48%)
Query: 21 IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYIN 80
I+K+ L ++ N +R F+++ L+ L + N + FI P +F L+E ++
Sbjct: 270 IVKLDLSHNKINQ----LRPKEFEDVHELKKLNLSSNG-IQFIDPAAFLGLTHLEELDLS 324
Query: 81 NNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYN-LHCSQ 138
NN++ + + L D L++L ++ NPW CD +I +L Y K ++YN L C
Sbjct: 325 NNSLQNFDYGVLEDLYFLKLLWLRENPWRCDYNIHYLY-YWLKHHYN---VHYNGLECKM 380
Query: 139 PVKFSNVHLLSNPLLSHISGECVKGAL 165
P ++ + + S+ EC K L
Sbjct: 381 PEEYKG-WFVGKYVRSYYE-ECPKDKL 405
>UNIPROTKB|Q8N6Y2 [details] [associations]
symbol:LRRC17 "Leucine-rich repeat-containing protein 17"
species:9606 "Homo sapiens" [GO:0001649 "osteoblast
differentiation" evidence=ISS] [GO:0033687 "osteoblast
proliferation" evidence=ISS] [GO:0045671 "negative regulation of
osteoclast differentiation" evidence=ISS] [GO:0048539 "bone marrow
development" evidence=ISS] [GO:0005615 "extracellular space"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005615
InterPro:IPR000483 SMART:SM00082 GO:GO:0001503 EMBL:AC073127
GO:GO:0045671 GO:GO:0048539 EMBL:U32907 EMBL:AY358889 EMBL:BC027903
IPI:IPI00171160 IPI:IPI00418181 PIR:G02020 RefSeq:NP_001026862.1
RefSeq:NP_005815.2 UniGene:Hs.567412 ProteinModelPortal:Q8N6Y2
SMR:Q8N6Y2 STRING:Q8N6Y2 PhosphoSite:Q8N6Y2 DMDM:51701682
PRIDE:Q8N6Y2 DNASU:10234 Ensembl:ENST00000249377
Ensembl:ENST00000339431 GeneID:10234 KEGG:hsa:10234 UCSC:uc003vat.3
UCSC:uc003vau.3 CTD:10234 GeneCards:GC07P102553 HGNC:HGNC:16895
HPA:HPA030139 neXtProt:NX_Q8N6Y2 PharmGKB:PA134866295
eggNOG:NOG263968 HOGENOM:HOG000113365 HOVERGEN:HBG052344
InParanoid:Q8N6Y2 OMA:PIQTLDC OrthoDB:EOG4MCX08 PhylomeDB:Q8N6Y2
GenomeRNAi:10234 NextBio:38756 ArrayExpress:Q8N6Y2 Bgee:Q8N6Y2
CleanEx:HS_LRRC17 Genevestigator:Q8N6Y2 GermOnline:ENSG00000128606
Uniprot:Q8N6Y2
Length = 441
Score = 112 (44.5 bits), Expect = 0.00033, P = 0.00033
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 21 IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYIN 80
I+K+ L Y+ N +R F+++ L+ L + N + FI P +F L+E ++
Sbjct: 270 IVKLDLSYNKINQ----LRPKEFEDVHELKKLNLSSNG-IEFIDPAAFLGLTHLEELDLS 324
Query: 81 NNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP 139
NN++ + + L D L++L ++ NPW CD +I +L Y + + N L C P
Sbjct: 325 NNSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYNIHYL--YYWLKHHYNVHFN-GLECKTP 381
Query: 140 VKF 142
++
Sbjct: 382 EEY 384
>UNIPROTKB|F1MSM8 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:DAAA02033778 IPI:IPI00713179 RefSeq:XP_001249506.1
RefSeq:XP_002691956.1 UniGene:Bt.87936 Ensembl:ENSBTAT00000005757
GeneID:781119 KEGG:bta:781119 NextBio:20924630 Uniprot:F1MSM8
Length = 842
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00034
Identities = 41/129 (31%), Positives = 60/129 (46%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLP--HELGDWD 95
I TF + L+ LY N N L + P+ F+ L + N T LP + L D D
Sbjct: 452 ILPGTFNPMPKLKVLYLN-NNLLQVLPPHIFSGV-PLTRINLKTNQFTHLPVSNILDDLD 509
Query: 96 SLEVLDIQSNPWTCDCSI----QWLIDYVAKRQRTDPEL---NYNLHCSQPVKFSNVHLL 148
L +D++ NPW C C + QW I ++K TD L +LH + +K N LL
Sbjct: 510 LLTQIDLEDNPWDCSCDLVGLQQW-IQKLSKNTVTDEILCTSPEHLH-KKELKALNSELL 567
Query: 149 SNPLLSHIS 157
L+++ S
Sbjct: 568 CPGLVNNPS 576
>MGI|MGI:2448607 [details] [associations]
symbol:Nyx "nyctalopin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0007601 "visual perception"
evidence=IMP] [GO:0050896 "response to stimulus" evidence=IEA]
MGI:MGI:2448607 GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050896
GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477 HOVERGEN:HBG031762
KO:K08129 OrthoDB:EOG43JC4W EMBL:AY114303 EMBL:BC035244
EMBL:BC048381 EMBL:AK038912 IPI:IPI00117261 RefSeq:NP_775591.1
UniGene:Mm.90233 ProteinModelPortal:P83503 SMR:P83503 STRING:P83503
PhosphoSite:P83503 PRIDE:P83503 Ensembl:ENSMUST00000050434
GeneID:236690 KEGG:mmu:236690 GeneTree:ENSGT00690000101803
InParanoid:P83503 NextBio:383039 Bgee:P83503 CleanEx:MM_NYX
Genevestigator:P83503 GermOnline:ENSMUSG00000051228 Uniprot:P83503
Length = 476
Score = 112 (44.5 bits), Expect = 0.00037, P = 0.00037
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 35 LYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LGD 93
L ++ + F +L L+ LY + N +TF+ +F N L ++N N +T L
Sbjct: 261 LGSVARAWFSDLAELELLYLDRN-SITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAFQP 319
Query: 94 WDSLEVLDIQSNPWTCDCSIQWLIDYV 120
L L + NPW CDC ++WL D++
Sbjct: 320 GFFLGRLFLFRNPWRCDCQLEWLRDWM 346
>MGI|MGI:3605040 [details] [associations]
symbol:Lrrc24 "leucine rich repeat containing 24"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3605040 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
eggNOG:NOG255871 GeneTree:ENSGT00700000104028 CTD:441381
HOGENOM:HOG000234857 HOVERGEN:HBG079563 OMA:NITLAHA
OrthoDB:EOG4DR9CG EMBL:AK048678 EMBL:AK078176 EMBL:BC116884
EMBL:BC116886 IPI:IPI00221813 RefSeq:NP_932787.1 UniGene:Mm.289666
ProteinModelPortal:Q8BHA1 SMR:Q8BHA1 PRIDE:Q8BHA1
Ensembl:ENSMUST00000049956 GeneID:378937 KEGG:mmu:378937
UCSC:uc007wme.1 InParanoid:Q14AD4 NextBio:401012 Bgee:Q8BHA1
CleanEx:MM_LRRC24 Genevestigator:Q8BHA1
GermOnline:ENSMUSG00000033707 Uniprot:Q8BHA1
Length = 521
Score = 112 (44.5 bits), Expect = 0.00042, P = 0.00042
Identities = 32/130 (24%), Positives = 64/130 (49%)
Query: 21 IMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYIN 80
++++++ Y N +L + TF +L LQ L+ N + + + SL ++
Sbjct: 129 LVQLRVLYLAGN-QLAKLLDFTFLHLPRLQELHLQEN-SIELLEDQALAGLSSLALLDLS 186
Query: 81 NNAITSLPHE-LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKR-QRTDPELNYNLHCSQ 138
N + ++ E L SL+VL + NPW CDC++ WL ++ + +R + + C++
Sbjct: 187 RNQLGTISKEALQPLSSLQVLRLTENPWRCDCALHWLGSWIKEGGRRLLSSRDKKITCAE 246
Query: 139 PVKFSNVHLL 148
P + + LL
Sbjct: 247 PPRLALQSLL 256
>ZFIN|ZDB-GENE-080327-6 [details] [associations]
symbol:flrt1b "fibronectin leucine rich transmembrane
1b" species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR003961 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080327-6
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104442 EMBL:BX004778 IPI:IPI00876731
Ensembl:ENSDART00000114790 Bgee:F1QF54 Uniprot:F1QF54
Length = 696
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 47 LNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GDWDSLEVLDIQSN 105
L+L LY N + + S + L++ I+ N +T+LP L D DSL L ++ N
Sbjct: 248 LHLLRLYLQDNA-IAHMPRGSLDGMRRLQKLDISGNNLTTLPRGLFKDLDSLSQLLVRGN 306
Query: 106 PWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFSNVHLLSNPL 152
PW C C+++WL D++ +R + H + ++ + LS+ L
Sbjct: 307 PWYCGCNLRWLHDWLHERGSSVTVRGLTCHAPERLRGMALRDLSSQL 353
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 29/108 (26%), Positives = 55/108 (50%)
Query: 37 AIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE-LGDWD 95
++ + F+ L +L L + N ++ +HP++F + L Y+ N +++L E L
Sbjct: 192 SVPERAFRGLHSLDRLLLHQN-RVARVHPHAFRDLGRLMTLYLFANNLSALSAEALAPLR 250
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQPVKFS 143
SL+ L + NPW CDC + L ++ + + + EL CS P + +
Sbjct: 251 SLQYLRLNDNPWVCDCRARPLWAWLQQFRGSSSELP----CSLPARLA 294
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 30/103 (29%), Positives = 53/103 (51%)
Query: 43 FKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GD-WDSLEVL 100
FK+L L+++ N L + F+N SLK + N ITS+ + G + +L L
Sbjct: 583 FKDLRELKSIDLGMN-NLNILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYL 641
Query: 101 DIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
D++ NP+ C C SI W ++++ EL+ + C+ P ++
Sbjct: 642 DMRFNPFDCTCESIAWFVNWINITHTNISELSNHYLCNTPPQY 684
>UNIPROTKB|E2RIV9 [details] [associations]
symbol:TLR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034123 "positive regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032757 "positive regulation of interleukin-8 production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] [GO:0032735 "positive regulation
of interleukin-12 production" evidence=IEA] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0007252 "I-kappaB phosphorylation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045359 "positive
regulation of interferon-beta biosynthetic process" evidence=IEA]
[GO:0045356 "positive regulation of interferon-alpha biosynthetic
process" evidence=IEA] [GO:0045080 "positive regulation of
chemokine biosynthetic process" evidence=IEA] [GO:0045078 "positive
regulation of interferon-gamma biosynthetic process" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0042346 "positive regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0034346 "positive regulation of
type III interferon production" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027173
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0005737 GO:GO:0006952 GO:GO:0043123
GO:GO:0046330 GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0032722 GO:GO:0032755
GO:GO:0009615 GO:GO:0051092 GO:GO:0032757 GO:GO:0071260
InterPro:IPR000372 SMART:SM00013 GO:GO:0032760 GO:GO:0043330
GO:GO:0032735 GO:GO:0042346 GO:GO:0045078 GO:GO:0032728
GO:GO:0007252 GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098 KO:K05401
PANTHER:PTHR24365:SF5 OMA:IANINDD GO:GO:0045356 GO:GO:0034346
EMBL:AAEX03010493 RefSeq:XP_540020.2 ProteinModelPortal:E2RIV9
Ensembl:ENSCAFT00000011868 GeneID:482905 KEGG:cfa:482905
Uniprot:E2RIV9
Length = 905
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYS-FNNDWSLKEFYINNNAITSLPHEL-GD-W 94
I FK L L+++ N L I P S FN+ SLK + N ITS+ + G +
Sbjct: 578 IPAEVFKGLSELKSIDLGLN-NLN-IFPSSLFNDQVSLKSLNLQKNLITSVEKNVFGPAF 635
Query: 95 DSLEVLDIQSNPWTCDC-SIQWLIDYVAKRQRTDPELNYNLHCSQPVKF 142
+L LD+ NP+ C C SI W ++++ EL+ + C+ P ++
Sbjct: 636 RNLSNLDMSFNPFDCTCESIAWFVNWINSTHTNISELSSHYLCNTPPQY 684
>UNIPROTKB|Q9NZU1 [details] [associations]
symbol:FLRT1 "Leucine-rich repeat transmembrane protein
FLRT1" species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=NAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS] [GO:0005057
"receptor signaling protein activity" evidence=NAS] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CH471076
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0030674
GO:GO:0005057 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:AF169675 EMBL:AY358308 EMBL:AK289931 EMBL:AP006333
EMBL:BC018370 IPI:IPI00291395 RefSeq:NP_037412.2 UniGene:Hs.584876
ProteinModelPortal:Q9NZU1 SMR:Q9NZU1 MINT:MINT-1778423
STRING:Q9NZU1 PhosphoSite:Q9NZU1 DMDM:215274159 PRIDE:Q9NZU1
DNASU:23769 Ensembl:ENST00000246841 GeneID:23769 KEGG:hsa:23769
UCSC:uc001nyi.1 CTD:23769 GeneCards:GC11P063871 HGNC:HGNC:3760
MIM:604806 neXtProt:NX_Q9NZU1 PharmGKB:PA28177 HOGENOM:HOG000290188
HOVERGEN:HBG051629 InParanoid:Q9NZU1 KO:K16362 OrthoDB:EOG4K9BBW
GenomeRNAi:23769 NextBio:46741 ArrayExpress:Q9NZU1 Bgee:Q9NZU1
CleanEx:HS_FLRT1 Genevestigator:Q9NZU1 GermOnline:ENSG00000126500
Uniprot:Q9NZU1
Length = 646
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 48 NLQTLYCNFNPKLTFIHPYS-FNNDWSLKEFYINNNAITSLPHEL-GDWDSLEVLDIQSN 105
+LQ LY N ++ I PY+ L+ ++NN +T+LP L D +L L +++N
Sbjct: 243 HLQKLYLQDNA-ISHI-PYNTLAKMRELERLDLSNNNLTTLPRGLFDDLGNLAQLLLRNN 300
Query: 106 PWTCDCSIQWLIDYVAKRQRTDPELNYN-LHCSQPVK 141
PW C C++ WL D+V R +N L C P K
Sbjct: 301 PWFCGCNLMWLRDWVKARAAV---VNVRGLMCQGPEK 334
>UNIPROTKB|Q9NZU0 [details] [associations]
symbol:FLRT3 "Leucine-rich repeat transmembrane protein
FLRT3" species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0030674 "protein binding, bridging" evidence=NAS]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005057 "receptor
signaling protein activity" evidence=NAS] InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0005887 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0030674 EMBL:CH471133 GO:GO:0005057 InterPro:IPR000372
SMART:SM00013 HOVERGEN:HBG051629 KO:K16362 EMBL:AF169677
EMBL:AB040902 EMBL:AK027297 EMBL:AK027670 EMBL:AK027694
EMBL:AY358319 EMBL:AK074909 EMBL:AL132826 EMBL:BC020870
IPI:IPI00002320 RefSeq:NP_037413.1 RefSeq:NP_938205.1
UniGene:Hs.41296 ProteinModelPortal:Q9NZU0 SMR:Q9NZU0 STRING:Q9NZU0
PhosphoSite:Q9NZU0 DMDM:20138400 PaxDb:Q9NZU0 PeptideAtlas:Q9NZU0
PRIDE:Q9NZU0 DNASU:23767 Ensembl:ENST00000341420
Ensembl:ENST00000378053 GeneID:23767 KEGG:hsa:23767 UCSC:uc002wov.2
CTD:23767 GeneCards:GC20M014251 HGNC:HGNC:3762 HPA:CAB026166
MIM:604808 neXtProt:NX_Q9NZU0 PharmGKB:PA28179 InParanoid:Q9NZU0
OMA:SPYRVCM OrthoDB:EOG4NCMCB GenomeRNAi:23767 NextBio:46731
ArrayExpress:Q9NZU0 Bgee:Q9NZU0 CleanEx:HS_FLRT3
Genevestigator:Q9NZU0 GermOnline:ENSG00000125848 Uniprot:Q9NZU0
Length = 649
Score = 112 (44.5 bits), Expect = 0.00057, P = 0.00057
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 48 NLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL-GDWDSLEVLDIQSNP 106
NL+ LY N + + P +F+ L ++NN +++LP + D D++ L +++NP
Sbjct: 248 NLRKLYLQDN-HINRVPPNAFSYLRQLYRLDMSNNNLSNLPQGIFDDLDNITQLILRNNP 306
Query: 107 WTCDCSIQWLIDYVAKRQRTDPELNYN-LHCSQPVK 141
W C C ++W+ D++ Q ++N L C P K
Sbjct: 307 WYCGCKMKWVRDWL---QSLPVKVNVRGLMCQAPEK 339
>UNIPROTKB|F1NR95 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] InterPro:IPR000742 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
GO:GO:0009986 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0043065 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 PROSITE:PS00010 GO:GO:0071672
GO:GO:0010596 GO:GO:0001933 GO:GO:0071676 GO:GO:0070100
GO:GO:0090288 GO:GO:0045499 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 EMBL:AADN02015249 EMBL:AADN02015250 EMBL:AADN02015251
EMBL:AADN02015252 EMBL:AADN02015253 EMBL:AADN02015254
EMBL:AADN02015255 EMBL:AADN02015256 EMBL:AADN02015257
EMBL:AADN02015258 EMBL:AADN02015259 EMBL:AADN02015260
EMBL:AADN02015261 EMBL:AADN02015262 EMBL:AADN02015263
EMBL:AADN02015264 EMBL:AADN02015265 EMBL:AADN02015266
EMBL:AADN02015267 EMBL:AADN02015268 EMBL:AADN02015269
EMBL:AADN02015270 EMBL:AADN02015271 IPI:IPI00818914
Ensembl:ENSGALT00000037313 ArrayExpress:F1NR95 Uniprot:F1NR95
Length = 218
Score = 105 (42.0 bits), Expect = 0.00058, P = 0.00058
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 67 SFNNDWSLKEFYINNNAITSLPH-ELGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQR 125
+F+ SL+ ++ N I+ +P D +L L I +NP CDC++QWL D+V K +
Sbjct: 8 TFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWV-KSEY 66
Query: 126 TDPELNYNLHCSQPVKFSNVHLLSNP 151
+P + C+ P + ++ LL+ P
Sbjct: 67 KEPGI---ARCAGPGEMADKLLLTTP 89
>RGD|1565152 [details] [associations]
symbol:Flrt1 "fibronectin leucine rich transmembrane protein 1"
species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:1565152
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH473953
CTD:23769 KO:K16362 OrthoDB:EOG4K9BBW GeneTree:ENSGT00700000104442
IPI:IPI00390639 RefSeq:NP_001102630.1 UniGene:Rn.169901
Ensembl:ENSRNOT00000030625 GeneID:499308 KEGG:rno:499308
UCSC:RGD:1565152 OMA:TIFPSNG NextBio:702500 Uniprot:D4AC39
Length = 674
Score = 112 (44.5 bits), Expect = 0.00059, P = 0.00059
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 48 NLQTLYCNFNPKLTFIHPYS-FNNDWSLKEFYINNNAITSLPHEL-GDWDSLEVLDIQSN 105
+LQ LY N ++ I PY+ L+ ++NN +T+LP L D +L L +++N
Sbjct: 271 HLQKLYLQDNA-ISHI-PYNTLAKMRELERLDLSNNNLTTLPRGLFDDLGNLAQLLLRNN 328
Query: 106 PWTCDCSIQWLIDYVAKRQRTDPELNYN-LHCSQPVK 141
PW C C++ WL D+V R +N L C P K
Sbjct: 329 PWFCGCNLMWLRDWVKARAAV---VNVRGLMCQGPEK 362
>UNIPROTKB|E2RBW8 [details] [associations]
symbol:ASPN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070171 "negative regulation of tooth
mineralization" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030282 "bone mineralization" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005578 GO:GO:0005509 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030282 CTD:54829
GeneTree:ENSGT00700000104006 KO:K08120 OMA:LCSAKPL GO:GO:0070171
GO:GO:0030512 InterPro:IPR016352 PIRSF:PIRSF002490
EMBL:AAEX03000683 RefSeq:XP_853321.1 ProteinModelPortal:E2RBW8
Ensembl:ENSCAFT00000037590 GeneID:610685 KEGG:cfa:610685
NextBio:20896236 Uniprot:E2RBW8
Length = 372
Score = 108 (43.1 bits), Expect = 0.00077, P = 0.00077
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 32 NSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHEL 91
N+++ I++N FK L +L L N N KLT IHP +F L+ Y+++N ++ +P L
Sbjct: 103 NNKIKEIKENDFKGLTSLYALILN-NNKLTKIHPKAFLTTKKLRRLYLSHNQLSEIPFNL 161
Query: 92 GDWDSLEVLDIQSN 105
SL L I N
Sbjct: 162 PK--SLAELRIHDN 173
>MGI|MGI:1921761 [details] [associations]
symbol:Lrrc17 "leucine rich repeat containing 17"
species:10090 "Mus musculus" [GO:0001503 "ossification"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005615
"extracellular space" evidence=IDA] [GO:0033687 "osteoblast
proliferation" evidence=IDA] [GO:0045671 "negative regulation of
osteoclast differentiation" evidence=IDA] [GO:0048539 "bone marrow
development" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:1921761 GO:GO:0005615 InterPro:IPR000483 SMART:SM00082
GO:GO:0001503 GO:GO:0045671 GO:GO:0048539
GeneTree:ENSGT00700000104028 CTD:10234 eggNOG:NOG263968
HOGENOM:HOG000113365 HOVERGEN:HBG052344 OMA:PIQTLDC
OrthoDB:EOG4MCX08 EMBL:AK018071 EMBL:BC030317 IPI:IPI00110185
RefSeq:NP_083253.1 UniGene:Mm.439963 ProteinModelPortal:Q9CXD9
SMR:Q9CXD9 STRING:Q9CXD9 PRIDE:Q9CXD9 Ensembl:ENSMUST00000035651
GeneID:74511 KEGG:mmu:74511 UCSC:uc008wor.2 InParanoid:Q9CXD9
NextBio:340982 Bgee:Q9CXD9 CleanEx:MM_LRRC17 Genevestigator:Q9CXD9
GermOnline:ENSMUSG00000039883 Uniprot:Q9CXD9
Length = 443
Score = 109 (43.4 bits), Expect = 0.00077, P = 0.00077
Identities = 32/114 (28%), Positives = 61/114 (53%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
+++++ +R F+++ L+ L + N + FI P +F L+E ++NN++ + +
Sbjct: 278 SSNKIRQLRPKEFEDVHELKKLNLSSNG-IEFIDPAAFLGLIHLEELDLSNNSLQNFDYG 336
Query: 91 -LGDWDSLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYN-LHCSQPVKF 142
L D L++L ++ NPW CD SI +L Y K ++YN L C P ++
Sbjct: 337 VLEDLYFLKLLWLRDNPWRCDYSIHYLY-YWLKHHYN---VHYNGLECKTPEEY 386
>UNIPROTKB|Q9H5Y7 [details] [associations]
symbol:SLITRK6 "SLIT and NTRK-like protein 6" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 EMBL:CH471093
HOGENOM:HOG000290667 HOVERGEN:HBG056407 EMBL:AK021931 EMBL:AK026427
EMBL:AK292793 EMBL:AL137517 EMBL:BX648640 EMBL:AL162373
EMBL:BC101070 EMBL:BC101071 EMBL:BC101072 EMBL:BC101073
IPI:IPI00176398 PIR:T46279 RefSeq:NP_115605.2 UniGene:Hs.525105
ProteinModelPortal:Q9H5Y7 SMR:Q9H5Y7 STRING:Q9H5Y7
PhosphoSite:Q9H5Y7 DMDM:59803110 PaxDb:Q9H5Y7 PRIDE:Q9H5Y7
DNASU:84189 Ensembl:ENST00000400286 GeneID:84189 KEGG:hsa:84189
UCSC:uc001vll.1 CTD:84189 GeneCards:GC13M086366 HGNC:HGNC:23503
HPA:HPA014491 MIM:609681 neXtProt:NX_Q9H5Y7 PharmGKB:PA134928433
eggNOG:NOG113965 InParanoid:Q9H5Y7 OMA:YFELKAN OrthoDB:EOG4X0MRT
PhylomeDB:Q9H5Y7 GenomeRNAi:84189 NextBio:73578 Bgee:Q9H5Y7
CleanEx:HS_SLITRK6 Genevestigator:Q9H5Y7 GermOnline:ENSG00000184564
Uniprot:Q9H5Y7
Length = 841
Score = 112 (44.5 bits), Expect = 0.00078, P = 0.00078
Identities = 30/104 (28%), Positives = 49/104 (47%)
Query: 38 IRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLP--HELGDWD 95
I TF + L+ LY N N L + P+ F+ L + + N T LP + L D D
Sbjct: 450 ILPGTFNPMPKLKVLYLN-NNLLQVLPPHIFSGV-PLTKVNLKTNQFTHLPVSNILDDLD 507
Query: 96 SLEVLDIQSNPWTCDCSIQWLIDYVAKRQRTDPELNYNLHCSQP 139
L +D++ NPW C C + L ++ K + + ++ C+ P
Sbjct: 508 LLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNT--VTDDILCTSP 549
>UNIPROTKB|Q9BXN1 [details] [associations]
symbol:ASPN "Asporin" species:9606 "Homo sapiens"
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=IDA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IDA] [GO:0005509
"calcium ion binding" evidence=IDA] [GO:0030282 "bone
mineralization" evidence=IDA] [GO:0070171 "negative regulation of
tooth mineralization" evidence=ISS] [GO:0031012 "extracellular
matrix" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005578 eggNOG:COG4886 GO:GO:0005509 EMBL:CH471089
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030282
CTD:54829 HOVERGEN:HBG016052 KO:K08120 OMA:LCSAKPL
OrthoDB:EOG4KWJT1 GO:GO:0070171 GO:GO:0030512 InterPro:IPR016352
PIRSF:PIRSF002490 EMBL:AF316824 EMBL:AY029191 EMBL:AK000136
EMBL:AK027359 EMBL:AY358329 EMBL:AL137848 IPI:IPI00418431
RefSeq:NP_001180264.1 RefSeq:NP_060150.4 UniGene:Hs.435655
ProteinModelPortal:Q9BXN1 SMR:Q9BXN1 STRING:Q9BXN1
PhosphoSite:Q9BXN1 DMDM:209572589 PaxDb:Q9BXN1 PRIDE:Q9BXN1
Ensembl:ENST00000375544 GeneID:54829 KEGG:hsa:54829 UCSC:uc004ase.2
GeneCards:GC09M095218 HGNC:HGNC:14872 HPA:HPA008435 HPA:HPA024230
MIM:603932 MIM:607850 MIM:608135 neXtProt:NX_Q9BXN1
PharmGKB:PA25057 InParanoid:Q9BXN1 PhylomeDB:Q9BXN1
GenomeRNAi:54829 NextBio:57604 ArrayExpress:Q9BXN1 Bgee:Q9BXN1
CleanEx:HS_ASPN Genevestigator:Q9BXN1 GermOnline:ENSG00000106819
Uniprot:Q9BXN1
Length = 380
Score = 108 (43.1 bits), Expect = 0.00080, P = 0.00080
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 16 DTQYTIMKVQLPYSTA-----NSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNN 70
D T + +P+ T N+++ I++N FK L +L L N N KLT IHP +F
Sbjct: 90 DLGLTSVPTNIPFDTRMLDLQNNKIKEIKENDFKGLTSLYGLILN-NNKLTKIHPKAFLT 148
Query: 71 DWSLKEFYINNNAITSLPHELGDWDSLEVLDIQSN 105
L+ Y+++N ++ +P L SL L I N
Sbjct: 149 TKKLRRLYLSHNQLSEIPLNLPK--SLAELRIHEN 181
>MGI|MGI:2389174 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030054 "cell junction"
evidence=IEA] [GO:0042043 "neurexin family protein binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IGI;ISO] [GO:0060076 "excitatory synapse"
evidence=ISO] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2389174
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI OrthoDB:EOG4PG60Z
EMBL:AY182027 EMBL:AK043173 EMBL:AK043784 EMBL:AK044705
EMBL:AK046818 EMBL:AK049920 EMBL:AK122278 IPI:IPI00313492
RefSeq:NP_821072.1 UniGene:Mm.39900 ProteinModelPortal:Q8BGA3
SMR:Q8BGA3 STRING:Q8BGA3 PhosphoSite:Q8BGA3 PaxDb:Q8BGA3
PRIDE:Q8BGA3 DNASU:107065 Ensembl:ENSMUST00000091636 GeneID:107065
KEGG:mmu:107065 UCSC:uc008ema.1 InParanoid:Q8BGA3 NextBio:358560
Bgee:Q8BGA3 CleanEx:MM_LRRTM2 Genevestigator:Q8BGA3
GermOnline:ENSMUSG00000071862 Uniprot:Q8BGA3
Length = 515
Score = 109 (43.4 bits), Expect = 0.00096, P = 0.00096
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
++++++ + TF L+NLQ L +FN +L+ +HP F L+ ++ +N++ ++P
Sbjct: 117 SSNKIFYLPNTTFTQLINLQNLDLSFN-QLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR 175
Query: 91 LGDWD--SLEVLDIQSN 105
L WD SLE LD+ +N
Sbjct: 176 LF-WDCRSLEFLDLSTN 191
>RGD|1593785 [details] [associations]
symbol:Lrrtm2 "leucine rich repeat transmembrane neuronal 2"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042043 "neurexin
family protein binding" evidence=IPI] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO;IDA] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 RGD:1593785 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003591
SMART:SM00369 GO:GO:0050808 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0060076 EMBL:CH473974
CTD:26045 OrthoDB:EOG4PG60Z IPI:IPI00202163 RefSeq:NP_001102939.1
UniGene:Rn.218238 Ensembl:ENSRNOT00000026825 GeneID:685472
KEGG:rno:685472 UCSC:RGD:1593785 NextBio:729781 Uniprot:D4A7P2
Length = 515
Score = 109 (43.4 bits), Expect = 0.00096, P = 0.00096
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
++++++ + TF L+NLQ L +FN +L+ +HP F L+ ++ +N++ ++P
Sbjct: 117 SSNKIFYLPNTTFTQLINLQNLDLSFN-QLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR 175
Query: 91 LGDWD--SLEVLDIQSN 105
L WD SLE LD+ +N
Sbjct: 176 LF-WDCRSLEFLDLSTN 191
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 109 (43.4 bits), Expect = 0.00096, P = 0.00096
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
++++++ + TF L+NLQ L +FN +L+ +HP F L+ ++ +N++ ++P
Sbjct: 117 SSNKIFYLPNTTFTQLINLQNLDLSFN-QLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR 175
Query: 91 LGDWD--SLEVLDIQSN 105
L WD SLE LD+ +N
Sbjct: 176 LF-WDCRSLEFLDLSTN 191
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 109 (43.4 bits), Expect = 0.00096, P = 0.00096
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 31 ANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFNNDWSLKEFYINNNAITSLPHE 90
++++++ + TF L+NLQ L +FN +L+ +HP F L+ ++ +N++ ++P
Sbjct: 117 SSNKIFYLPNTTFTQLINLQNLDLSFN-QLSSLHPELFYGLRKLQTLHLRSNSLRTIPVR 175
Query: 91 LGDWD--SLEVLDIQSN 105
L WD SLE LD+ +N
Sbjct: 176 LF-WDCRSLEFLDLSTN 191
>UNIPROTKB|F1NWG8 [details] [associations]
symbol:F1NWG8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050808 "synapse organization" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104056 OMA:IRQCSMI EMBL:AADN02035971
IPI:IPI00583715 Ensembl:ENSGALT00000003872 Uniprot:F1NWG8
Length = 520
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 30/98 (30%), Positives = 56/98 (57%)
Query: 10 RQDISYDTQYTIMKVQLPYSTANSELYAIRKNTFKNLLNLQTLYCNFNPKLTFIHPYSFN 69
R+D S+ Y + ++ L ++++++ + TF LLNLQ L +FN +L+ +HP
Sbjct: 106 RED-SFQGLYKLKELVL----SSNKIFHLPNTTFSQLLNLQNLDLSFN-QLSSLHPELLY 159
Query: 70 NDWSLKEFYINNNAITSLPHELGDWD--SLEVLDIQSN 105
L+ ++ +N++ ++P L WD SLE LD+ +N
Sbjct: 160 GLRKLQTLHLRSNSLRTIPVRLF-WDCRSLEFLDLSTN 196
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 209 190 0.00091 110 3 11 22 0.44 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 185
No. of states in DFA: 598 (64 KB)
Total size of DFA: 190 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.23u 0.08s 18.31t Elapsed: 00:00:13
Total cpu time: 18.26u 0.08s 18.34t Elapsed: 00:00:16
Start: Thu Aug 15 13:27:53 2013 End: Thu Aug 15 13:28:09 2013
WARNINGS ISSUED: 1