Query psy14514
Match_columns 91
No_of_seqs 104 out of 300
Neff 5.2
Searched_HMMs 13730
Date Fri Aug 16 21:51:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14514.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14514hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i5za1 a.4.5.4 (A:138-206) Ca 72.9 1.5 0.00011 24.1 2.8 30 46-75 39-68 (69)
2 d2gaua1 a.4.5.4 (A:152-232) Tr 70.3 2.2 0.00016 23.7 3.3 30 46-75 39-68 (81)
3 d1ft9a1 a.4.5.4 (A:134-213) CO 67.4 1.7 0.00012 24.4 2.4 26 46-71 40-65 (80)
4 d1zyba1 a.4.5.4 (A:148-220) Pr 61.1 3.5 0.00025 23.0 2.9 31 45-75 36-66 (73)
5 d3e5ua1 a.4.5.4 (A:148-227) Ch 57.6 3.9 0.00029 22.7 2.7 30 46-75 40-69 (80)
6 d1jhfa1 a.4.5.2 (A:2-72) LexA 54.9 6.6 0.00048 21.8 3.4 28 46-73 34-65 (71)
7 d2zcwa1 a.4.5.4 (A:118-199) Tr 54.7 5 0.00036 22.3 2.8 31 45-75 38-68 (82)
8 d2bgca1 a.4.5.4 (A:138-237) Li 51.4 7.1 0.00052 23.1 3.3 30 46-75 41-71 (100)
9 d1u5ta2 a.4.5.54 (A:165-232) V 48.4 2.3 0.00017 24.4 0.6 33 38-70 13-53 (68)
10 d1k47a2 d.58.26.4 (A:195-329) 46.9 9.4 0.00068 23.0 3.4 33 32-64 94-126 (135)
11 d1hsja1 a.4.5.28 (A:373-487) S 43.5 9.1 0.00066 22.5 2.9 35 44-78 56-95 (115)
12 d1p4xa2 a.4.5.28 (A:126-250) S 41.2 11 0.00078 22.7 3.0 34 45-78 58-96 (125)
13 d1fxla2 d.58.7.1 (A:119-203) H 40.3 18 0.0013 19.7 3.7 37 41-78 49-85 (85)
14 d3ctaa1 a.4.5.28 (A:5-89) Ta10 39.9 14 0.001 20.8 3.3 33 46-78 31-65 (85)
15 d1b7fa2 d.58.7.1 (A:205-289) S 37.9 21 0.0015 19.3 3.7 37 41-78 49-85 (85)
16 d2cuja1 a.4.1.18 (A:8-108) Tra 36.0 13 0.00092 22.3 2.7 22 47-68 79-100 (101)
17 d1lnwa_ a.4.5.28 (A:) MexR rep 35.3 15 0.0011 21.9 3.0 35 44-78 58-97 (141)
18 d2b0ga1 d.58.7.1 (A:1-83) Spli 34.0 32 0.0023 18.4 4.1 38 39-78 44-81 (83)
19 d2cpha1 d.58.7.1 (A:454-547) P 34.0 30 0.0022 19.1 4.1 36 41-78 52-87 (94)
20 d1hw1a1 a.4.5.6 (A:5-78) Fatty 33.7 21 0.0015 19.6 3.3 31 45-75 36-67 (74)
21 d1z91a1 a.4.5.28 (A:8-144) Org 33.7 17 0.0012 21.4 3.0 34 45-78 56-94 (137)
22 d2ev0a1 a.4.5.24 (A:2-62) Mang 33.5 14 0.001 19.8 2.4 25 45-69 30-54 (61)
23 d2dita1 d.58.7.1 (A:8-106) HIV 33.3 37 0.0027 19.1 4.5 35 40-77 57-91 (99)
24 d1p4xa1 a.4.5.28 (A:1-125) Sta 32.9 9.2 0.00067 22.8 1.6 34 45-78 59-97 (125)
25 d2frha1 a.4.5.28 (A:102-216) P 31.9 17 0.0012 21.2 2.7 35 44-78 57-96 (115)
26 d2hr3a1 a.4.5.28 (A:2-146) Pro 31.4 22 0.0016 21.0 3.3 34 45-78 58-96 (145)
27 d1mkma1 a.4.5.33 (A:1-75) Tran 30.6 18 0.0013 19.7 2.6 25 45-69 29-53 (75)
28 d1t95a3 d.58.11.3 (A:162-234) 30.5 15 0.0011 21.0 2.2 29 50-78 20-51 (73)
29 d2a61a1 a.4.5.28 (A:5-143) Tra 30.5 20 0.0014 21.1 2.9 34 45-78 53-91 (139)
30 d2fbia1 a.4.5.28 (A:5-140) Pro 29.9 25 0.0019 20.5 3.4 34 45-78 53-91 (136)
31 d1ub9a_ a.4.5.28 (A:) Hypothet 28.2 36 0.0026 18.8 3.7 34 45-78 39-77 (100)
32 d2hs5a1 a.4.5.6 (A:25-93) Puta 27.7 32 0.0024 18.3 3.3 31 45-75 34-65 (69)
33 d1kkha2 d.58.26.3 (A:181-317) 26.6 16 0.0012 22.5 2.0 26 38-64 102-127 (137)
34 d3deua1 a.4.5.28 (A:2-141) Tra 26.5 26 0.0019 20.4 3.0 34 45-78 55-93 (140)
35 d1jgsa_ a.4.5.28 (A:) Multiple 25.8 27 0.002 20.5 2.9 34 45-78 57-95 (138)
36 d1s3ja_ a.4.5.28 (A:) Putative 25.1 39 0.0028 19.7 3.6 34 45-78 58-96 (143)
37 d2qswa1 d.58.18.13 (A:256-345) 24.9 36 0.0026 19.2 3.3 35 30-64 44-81 (90)
38 d2isya1 a.4.5.24 (A:2-64) Iron 24.3 24 0.0018 19.0 2.3 25 45-69 32-56 (63)
39 d2bv6a1 a.4.5.28 (A:5-140) Tra 23.3 21 0.0015 21.0 2.0 34 45-78 57-95 (136)
40 d1b7fa1 d.58.7.1 (A:123-204) S 23.0 51 0.0038 17.2 3.6 35 41-78 45-79 (82)
41 d2etha1 a.4.5.28 (A:1-140) Put 22.7 53 0.0038 19.0 3.9 34 45-78 55-93 (140)
42 d2adca2 d.58.7.1 (A:444-531) P 22.5 56 0.0041 17.4 4.0 37 40-78 48-84 (88)
43 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 21.8 44 0.0032 18.3 3.2 35 41-78 50-84 (93)
44 d1tzza1 c.1.11.2 (A:1146-1392) 21.8 25 0.0018 22.7 2.4 32 33-65 5-36 (247)
45 d3broa1 a.4.5.28 (A:3-137) Tra 21.7 52 0.0038 18.8 3.7 35 44-78 53-92 (135)
46 d1jmta_ d.58.7.3 (A:) d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=72.85 E-value=1.5 Score=24.12 Aligned_cols=30 Identities=13% Similarity=0.254 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHhhhCCcccCCCcEEEE
Q psy14514 46 LSANHNDFLAQLDMLRKGGWITRATRVVFI 75 (91)
Q Consensus 46 L~~~~~~a~~~L~~L~~~~WiD~~TRAvfv 75 (91)
+|-+++..-+.|+.|++.+||...-+-+.|
T Consensus 39 ~G~sRetvsr~L~~l~~~glI~~~~~~I~I 68 (69)
T d1i5za1 39 VGCSRETVGRILKMLEDQNLISAHGKTIVV 68 (69)
T ss_dssp HTCCHHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred HCCCHHHHHHHHHHHHHCCCEEEcCCEEEE
Confidence 466678888999999999999998777765
No 2
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=70.30 E-value=2.2 Score=23.68 Aligned_cols=30 Identities=7% Similarity=0.059 Sum_probs=24.8
Q ss_pred CCCCHHHHHHHHHHhhhCCcccCCCcEEEE
Q psy14514 46 LSANHNDFLAQLDMLRKGGWITRATRVVFI 75 (91)
Q Consensus 46 L~~~~~~a~~~L~~L~~~~WiD~~TRAvfv 75 (91)
+|-+++.....|+.|++.+||+..-+.+.|
T Consensus 39 ~G~sretvsr~L~~l~~~glI~~~~~~i~I 68 (81)
T d2gaua1 39 SNMTVSNAIRTLSTFVSERMLALDGKRIKI 68 (81)
T ss_dssp TTSCHHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred HCCCHHHHHHHHHHHHHCCCEEecCCEEEE
Confidence 567778889999999999999986666543
No 3
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=67.40 E-value=1.7 Score=24.38 Aligned_cols=26 Identities=27% Similarity=0.459 Sum_probs=21.9
Q ss_pred CCCCHHHHHHHHHHhhhCCcccCCCc
Q psy14514 46 LSANHNDFLAQLDMLRKGGWITRATR 71 (91)
Q Consensus 46 L~~~~~~a~~~L~~L~~~~WiD~~TR 71 (91)
+|-+++.....|+.|++.+||+..+|
T Consensus 40 lG~sretvsr~l~~l~~~g~I~~~~~ 65 (80)
T d1ft9a1 40 IGSSRQTTSTALNSLIKEGYISRQGR 65 (80)
T ss_dssp HCSCHHHHHHHHHHHHHTTSSEECST
T ss_pred HCCCHHHHHHHHHHHHHCCCEEECCC
Confidence 45667888899999999999998764
No 4
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=61.12 E-value=3.5 Score=23.02 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=25.0
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCCCcEEEE
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRATRVVFI 75 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfv 75 (91)
.+|-+++...+.|+.|++.+||...-+.+.|
T Consensus 36 ~lg~sr~tvsr~l~~l~~~g~I~~~~~~i~I 66 (73)
T d1zyba1 36 CLDDTRLNISKTLNELQDNGLIELHRKEILI 66 (73)
T ss_dssp HHTSCHHHHHHHHHHHHHTTSCEEETTEEEE
T ss_pred HHCCCHHHHHHHHHHHHHCCCEEecCCEEEE
Confidence 3567778888999999999999986666554
No 5
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=57.55 E-value=3.9 Score=22.66 Aligned_cols=30 Identities=10% Similarity=0.231 Sum_probs=21.0
Q ss_pred CCCCHHHHHHHHHHhhhCCcccCCCcEEEE
Q psy14514 46 LSANHNDFLAQLDMLRKGGWITRATRVVFI 75 (91)
Q Consensus 46 L~~~~~~a~~~L~~L~~~~WiD~~TRAvfv 75 (91)
+|-+++...+.|+.|++.++|+...+-+.|
T Consensus 40 ~g~sretvsr~l~~l~~~glI~~~~~~i~I 69 (80)
T d3e5ua1 40 TGVHHVTVSRVLASLKRENILDKKKNKIIV 69 (80)
T ss_dssp HTCCHHHHHHHHHHHHHTTSEEC----CEE
T ss_pred HCCCHHHHHHHHHHHHHCCcEEecCCEEEE
Confidence 455667888999999999999886665544
No 6
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=54.87 E-value=6.6 Score=21.75 Aligned_cols=28 Identities=29% Similarity=0.290 Sum_probs=22.6
Q ss_pred CCC-CHHHHHHHHHHhhhCCcccC---CCcEE
Q psy14514 46 LSA-NHNDFLAQLDMLRKGGWITR---ATRVV 73 (91)
Q Consensus 46 L~~-~~~~a~~~L~~L~~~~WiD~---~TRAv 73 (91)
+|- ++..+...|+.|++.+||.+ ..|++
T Consensus 34 ~g~~S~stv~~~l~~Le~kG~I~r~~~~~R~i 65 (71)
T d1jhfa1 34 LGFRSPNAAEEHLKALARKGVIEIVSGASRGI 65 (71)
T ss_dssp TTCSSHHHHHHHHHHHHHTTSEEECSSSSSCE
T ss_pred cCCCCHHHHHHHHHHHHHCcCeecCCCCCcee
Confidence 443 67788999999999999998 45665
No 7
>d2zcwa1 a.4.5.4 (A:118-199) Transcriptional regulator TTHA1359, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=54.72 E-value=5 Score=22.35 Aligned_cols=31 Identities=10% Similarity=0.205 Sum_probs=24.7
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCCCcEEEE
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRATRVVFI 75 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfv 75 (91)
.+|-+.+.....|+.|++.+||....+-+.|
T Consensus 38 ~lg~sr~tv~r~L~~l~~~gli~~~~~~i~I 68 (82)
T d2zcwa1 38 AVGSVRETVTKVIGELAREGYIRSGYGKIQL 68 (82)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred HHCCCHHHHHHHHHHHHHCCCEEecCCEEEE
Confidence 3566778888999999999999986665543
No 8
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=51.37 E-value=7.1 Score=23.13 Aligned_cols=30 Identities=7% Similarity=0.103 Sum_probs=23.3
Q ss_pred CCCC-HHHHHHHHHHhhhCCcccCCCcEEEE
Q psy14514 46 LSAN-HNDFLAQLDMLRKGGWITRATRVVFI 75 (91)
Q Consensus 46 L~~~-~~~a~~~L~~L~~~~WiD~~TRAvfv 75 (91)
+|-+ ++...++|+.|++.++|+..-+-+.|
T Consensus 41 lG~s~ReTVsR~L~~L~~~GlI~~~~~~i~I 71 (100)
T d2bgca1 41 SGIAHSSAVSRIISKLKQEKVIVYKNSCFYV 71 (100)
T ss_dssp TTCCCHHHHHHHHHHHHHTTSEEEETTEEEE
T ss_pred hCCchHHHHHHHHHHHHHCCCEEEcCCEEEE
Confidence 4444 56677999999999999987776654
No 9
>d1u5ta2 a.4.5.54 (A:165-232) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=48.41 E-value=2.3 Score=24.37 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=26.4
Q ss_pred CCCCeE------EECCCCHHHHHHHHHHhhhCC--cccCCC
Q psy14514 38 PYSGFY------QDLSANHNDFLAQLDMLRKGG--WITRAT 70 (91)
Q Consensus 38 ~gGGYv------~~L~~~~~~a~~~L~~L~~~~--WiD~~T 70 (91)
..-||| ..||=+++.|...|++|.+.+ |||.++
T Consensus 13 ~~~G~Vt~s~l~~~lgW~~~Ra~~aLd~lv~eGl~WvD~Q~ 53 (68)
T d1u5ta2 13 SILGYSSISLLKANLGWEAVRSKSALDEMVANGLLWIDYQG 53 (68)
T ss_dssp TTTSCCBHHHHHHHHCCCSHHHHHHHHHHHHTTSSEEECSS
T ss_pred HHcCceeHHHHHHHhCCCHHHHHHHHHHHHhcCcEEEecCC
Confidence 344776 467888899999999998865 999876
No 10
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]}
Probab=46.86 E-value=9.4 Score=23.05 Aligned_cols=33 Identities=9% Similarity=-0.113 Sum_probs=26.4
Q ss_pred ceeeecCCCCeEEECCCCHHHHHHHHHHhhhCC
Q psy14514 32 GQVGSYPYSGFYQDLSANHNDFLAQLDMLRKGG 64 (91)
Q Consensus 32 G~~~~Y~gGGYv~~L~~~~~~a~~~L~~L~~~~ 64 (91)
|...-=+|||.++-|..+.++...+-+.|++.+
T Consensus 94 ak~~GaGgGG~~i~l~~~~~~~~~i~~~~~~~G 126 (135)
T d1k47a2 94 AKSSGAGGGDCGIALSFDAQSTKTLKNRWADLG 126 (135)
T ss_dssp EEECSSCSSSEEEEEECSHHHHHHHHHHHHHTT
T ss_pred hhcccCcCCCeEEEEecChhhHHHHHHHHHHCC
Confidence 555555568899999998888888988888876
No 11
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=43.52 E-value=9.1 Score=22.53 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=28.1
Q ss_pred EECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 44 QDLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 44 ~~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
..++-++......++.|.+.+||.|. -|++.|..|
T Consensus 56 ~~l~~~~~~vs~~i~~Le~~gli~r~~~~~D~R~~~i~LT 95 (115)
T d1hsja1 56 KCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVT 95 (115)
T ss_dssp HSSCCCHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECC
T ss_pred HHHCCChhhHHHHHHHHHHcCCeEEEeecCCCceEEEEEC
Confidence 46788889999999999999999863 366666654
No 12
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=41.16 E-value=11 Score=22.65 Aligned_cols=34 Identities=18% Similarity=0.415 Sum_probs=28.1
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
.++-++.....+++.|.+.+||.+. -|.+.|..|
T Consensus 58 ~l~~~~~~vs~~v~~L~~~glV~r~~~~~D~R~v~i~LT 96 (125)
T d1p4xa2 58 TIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMD 96 (125)
T ss_dssp HSSSCHHHHHHHHHHHHHHTSSEEEECSSSTTCEEEECC
T ss_pred HHCCCcchHHHHHHHHHhccCEeeeecCCCCCeEEEEEC
Confidence 5788899999999999999999763 467777655
No 13
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.29 E-value=18 Score=19.74 Aligned_cols=37 Identities=14% Similarity=-0.002 Sum_probs=25.9
Q ss_pred CeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 41 GFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 41 GYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
||.+--=.+.++|.+.++.|.. ..++-+++.|-|.|+
T Consensus 49 g~afV~f~~~~~a~~Ai~~lng-~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 49 GVGFIRFDKRIEAEEAIKGLNG-QKPSGATEPITVKFA 85 (85)
T ss_dssp EEEEEEESSHHHHHHHHHHHTT-CCCTTCSSCCEEEEC
T ss_pred CeeEEEEcCHHHHHHHHHHhCC-CEeCCCCEEEEEEeC
Confidence 4533223578899999999854 567777788888874
No 14
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=39.87 E-value=14 Score=20.77 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=26.0
Q ss_pred CCCCHHHHHHHHHHhhhCCcccC--CCcEEEEEee
Q psy14514 46 LSANHNDFLAQLDMLRKGGWITR--ATRVVFIDFS 78 (91)
Q Consensus 46 L~~~~~~a~~~L~~L~~~~WiD~--~TRAvfvEFt 78 (91)
++-++......|+.|.+.+||.+ --|+++++.|
T Consensus 31 l~i~~~~vs~~l~~Le~~GlV~r~~D~R~~~i~LT 65 (85)
T d3ctaa1 31 LGISQQSASRIIIDLEKNGYITRTVTKRGQILNIT 65 (85)
T ss_dssp HTSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEC
T ss_pred HCCCHHHHHHHHHHHHHCCCeeeecccccccceEC
Confidence 56778889999999999999977 3466666654
No 15
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=37.86 E-value=21 Score=19.34 Aligned_cols=37 Identities=5% Similarity=0.012 Sum_probs=26.1
Q ss_pred CeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 41 GFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 41 GYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
||.+--=.+.++|.+.++.|... -++-.+|.+.|+|+
T Consensus 49 g~afV~f~~~~~A~~Ai~~l~g~-~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 49 GVAFVRYNKREEAQEAISALNNV-IPEGGSQPLSVRLA 85 (85)
T ss_dssp EEEEEEESSHHHHHHHHHHHTTC-CCTTCSSCCEEEEC
T ss_pred eeEEEEECCHHHHHHHHHHHCCC-EeCCCCeEEEEEEC
Confidence 55443335788999999999664 45666788888774
No 16
>d2cuja1 a.4.1.18 (A:8-108) Transcriptional adaptor 2-like, TADA2L {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.95 E-value=13 Score=22.26 Aligned_cols=22 Identities=27% Similarity=0.407 Sum_probs=18.2
Q ss_pred CCCHHHHHHHHHHhhhCCcccC
Q psy14514 47 SANHNDFLAQLDMLRKGGWITR 68 (91)
Q Consensus 47 ~~~~~~a~~~L~~L~~~~WiD~ 68 (91)
.-+...+.++.+.|.+.+||.+
T Consensus 79 kiD~~K~~rIydfl~~~GWi~~ 100 (101)
T d2cuja1 79 KIDVNKTRKIYDFLIREGYITK 100 (101)
T ss_dssp TSCHHHHHHHHHHHHTTTSSCC
T ss_pred cccHHHHHHHHHHHHHccCccc
Confidence 3445778899999999999986
No 17
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=35.34 E-value=15 Score=21.87 Aligned_cols=35 Identities=9% Similarity=0.163 Sum_probs=27.0
Q ss_pred EECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 44 QDLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 44 ~~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
..++.++....++++.|++.+||.+. -|.+++..|
T Consensus 58 ~~l~~~~~~vsr~l~~L~~~G~v~r~~~~~D~R~~~l~lT 97 (141)
T d1lnwa_ 58 RQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLT 97 (141)
T ss_dssp HHTTCCHHHHHHHHHHHHHTTSEEEEECSSSSSSEEEEEC
T ss_pred HHHCccHhHHHHHHHHHHHhhceeeeccCCCCcchhhccC
Confidence 35788899999999999999999753 356655543
No 18
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=34.04 E-value=32 Score=18.44 Aligned_cols=38 Identities=13% Similarity=-0.077 Sum_probs=27.9
Q ss_pred CCCeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 39 YSGFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 39 gGGYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
..||.+--=.+.++|.+.++.|+.....+ .+.+.|+|+
T Consensus 44 ~~g~afV~f~~~~~A~~A~~~l~g~~~~~--~~~i~v~~a 81 (83)
T d2b0ga1 44 RHDIAFVEFTTELQSNAAKEALQGFKITP--THAMKITFA 81 (83)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHTTCBSST--TCBCEEEEC
T ss_pred cceeEEEecCCHHHHHHHHHHhCCcEeCC--CcEEEEEEe
Confidence 35776555577899999999998777544 356888875
No 19
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.99 E-value=30 Score=19.09 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=25.7
Q ss_pred CeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 41 GFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 41 GYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
||.+--=.+.++|.+.|+.|.+..-|+- |.|-|+++
T Consensus 52 g~afV~f~~~~~A~~Ai~~l~~~~~~~G--r~l~V~~A 87 (94)
T d2cpha1 52 GFGFVDFITKQDAKKAFNALCHSTHLYG--RRLVLEWA 87 (94)
T ss_dssp SEEEEEESSHHHHHHHHHHHHTCCBSSS--CBCEEEEC
T ss_pred cEEEEEECCHHHHHHHHHHccCCcEECC--EEEEEEEc
Confidence 5644333778999999999976555553 67888886
No 20
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.73 E-value=21 Score=19.57 Aligned_cols=31 Identities=16% Similarity=0.336 Sum_probs=24.5
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccC-CCcEEEE
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITR-ATRVVFI 75 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~-~TRAvfv 75 (91)
.++-++...++.++.|.+.+||.+ .-+..||
T Consensus 36 ~~~vSr~tvr~Al~~L~~~G~i~~~~g~G~~V 67 (74)
T d1hw1a1 36 LIGVTRTTLREVLQRLARDGWLTIQHGKPTKV 67 (74)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEETTEEEEE
T ss_pred HHCCCHHHHHHHHHHHHHCCcEEEEeCceEEE
Confidence 356778899999999999999998 4445554
No 21
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=33.67 E-value=17 Score=21.44 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=27.3
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
.++-++......++.|.+.+||.+. -|.+.|..|
T Consensus 56 ~~~i~~~~vsr~i~~L~~~glv~r~~~~~D~R~~~i~lT 94 (137)
T d1z91a1 56 QLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLT 94 (137)
T ss_dssp TTTCCHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEEC
T ss_pred HHCcCHHHHHHHHHHHhhccceEEeecCCCCCeEEEEEC
Confidence 5677889999999999999999764 566666554
No 22
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=33.51 E-value=14 Score=19.83 Aligned_cols=25 Identities=12% Similarity=0.212 Sum_probs=21.5
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA 69 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~ 69 (91)
.|+-++..+...++.|++.+|+++.
T Consensus 30 ~L~vs~~SVs~mikrL~~~GlV~~~ 54 (61)
T d2ev0a1 30 ALAVHPSSVTKMVQKLDKDEYLIYE 54 (61)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEC-
T ss_pred HhCCCchhHHHHHHHHHHCCCEEEc
Confidence 4778888999999999999999874
No 23
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.28 E-value=37 Score=19.06 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=26.8
Q ss_pred CCeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEe
Q psy14514 40 SGFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDF 77 (91)
Q Consensus 40 GGYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEF 77 (91)
.|+++--=.+.++|...++.| +..|++. |-|-|||
T Consensus 57 ~G~~fV~f~~~e~A~~A~~~l-ng~~~~g--r~i~v~~ 91 (99)
T d2dita1 57 DGVASVSFRDPEEADYCIQTL-DGRWFGG--RQITAQA 91 (99)
T ss_dssp TCEEEEECSCHHHHHHHHHHS-TTCEETT--EECEEEE
T ss_pred ccEEEEEECCHHHHHHHHHHh-CCcEECC--EEEEEEE
Confidence 588776667789999999999 6777776 5566665
No 24
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=32.91 E-value=9.2 Score=22.78 Aligned_cols=34 Identities=26% Similarity=0.547 Sum_probs=26.8
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
.++-++.....+++.|.+.+||.+. -|.+.|..|
T Consensus 59 ~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT 97 (125)
T d1p4xa1 59 DLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISIS 97 (125)
T ss_dssp HSSSCGGGTHHHHHHHHHTTSCEEEECSSSTTSEEEECC
T ss_pred HhCCCcchHHHHHHHHHHCCCceeecccCCCCeEEEEEC
Confidence 4667778888999999999999653 577777654
No 25
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=31.89 E-value=17 Score=21.18 Aligned_cols=35 Identities=14% Similarity=0.334 Sum_probs=27.5
Q ss_pred EECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 44 QDLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 44 ~~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
-.++-++......++.|.+.+||.+. -|.+.|..|
T Consensus 57 ~~l~~~~~tvs~~i~~Le~~gli~r~~~~~D~R~~~i~LT 96 (115)
T d2frha1 57 NHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVN 96 (115)
T ss_dssp HHSSSHHHHHHHHHHHHHHTTSSCCBCCSSSSCCCEEECC
T ss_pred HHHCCCHhHHHHHHHHHHhhhhheeeecccCCceEEEEEC
Confidence 35777888999999999999999874 356666654
No 26
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.43 E-value=22 Score=20.99 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=25.5
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccC-----CCcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITR-----ATRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~-----~TRAvfvEFt 78 (91)
.++.++.....+++.|.+.+||.+ --|++.|..|
T Consensus 58 ~~~~~~~~vs~~i~~L~~~glv~r~~~~~DrR~~~i~LT 96 (145)
T d2hr3a1 58 AERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLS 96 (145)
T ss_dssp HTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEEC
T ss_pred HHCCCHHHHHHHHHHHHHcCCeEeeeCccchhHHHhccC
Confidence 467888999999999999999975 3455666554
No 27
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=30.60 E-value=18 Score=19.71 Aligned_cols=25 Identities=12% Similarity=0.303 Sum_probs=22.0
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA 69 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~ 69 (91)
.++-++..+.+.|..|.+.+|+.+.
T Consensus 29 ~~~~~~st~~rll~tL~~~g~l~~~ 53 (75)
T d1mkma1 29 KFNMSVSNAYKYMVVLEEKGFVLRK 53 (75)
T ss_dssp HTTCCHHHHHHHHHHHHHTTSEEEC
T ss_pred HHCcCHHHHHHHHHHHHHCCCEEEC
Confidence 4677889999999999999999874
No 28
>d1t95a3 d.58.11.3 (A:162-234) Hypothetical protein AF0491, C-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=30.52 E-value=15 Score=20.96 Aligned_cols=29 Identities=7% Similarity=0.254 Sum_probs=23.8
Q ss_pred HHHHHHHHHH---hhhCCcccCCCcEEEEEee
Q psy14514 50 HNDFLAQLDM---LRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 50 ~~~a~~~L~~---L~~~~WiD~~TRAvfvEFt 78 (91)
...+...|+. +++..|.+..+-++.||+.
T Consensus 20 ~gka~~~l~~~g~i~kEeW~~DGSw~~vveiP 51 (73)
T d1t95a3 20 TGRAISALYNFGGVTREEWQRDGSWICVMRIP 51 (73)
T ss_dssp HHHHHHHHHHHCCEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHHHHhCcchhhcccCCCcEEEEEEec
Confidence 3467777776 4899999999999999974
No 29
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=30.46 E-value=20 Score=21.08 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=27.7
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCCC-----cEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRAT-----RVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~T-----RAvfvEFt 78 (91)
.++-++.....+++.|.+.+||.+.. |...|+.|
T Consensus 53 ~l~i~~~tvs~~l~~L~~~gli~r~~~~~D~R~~~i~LT 91 (139)
T d2a61a1 53 LLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVIT 91 (139)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEEC
T ss_pred HhCCCcccchHHHHHHHhcCeeeeeeccCCCCeEEEEEC
Confidence 46778889999999999999998763 67777665
No 30
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=29.88 E-value=25 Score=20.46 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=26.8
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
.++-++......++.|.+.+||.+. -|.+.|..|
T Consensus 53 ~~~i~~~~vs~~i~~L~~~gli~r~~~~~D~R~~~l~lT 91 (136)
T d2fbia1 53 QACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLT 91 (136)
T ss_dssp HTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEEC
T ss_pred HHCCCHHHHHHHHHHHHHCCCEEEeecCccCchhhhccC
Confidence 4677888999999999999999875 356666554
No 31
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.21 E-value=36 Score=18.82 Aligned_cols=34 Identities=9% Similarity=0.260 Sum_probs=26.2
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
.++-++......|+.|++.+++.+. -|.++++.|
T Consensus 39 ~l~is~~~vs~~l~~L~~~glV~~~~~~~d~r~~~~~LT 77 (100)
T d1ub9a_ 39 VLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEIT 77 (100)
T ss_dssp HTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEEC
T ss_pred HHhhccccccHHHHHHhhhceeEEEEcCcCCccccccCC
Confidence 4677788889999999999999753 456666654
No 32
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=27.74 E-value=32 Score=18.29 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=23.8
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccC-CCcEEEE
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITR-ATRVVFI 75 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~-~TRAvfv 75 (91)
.++-++.-..+.++.|.+.++|.+ .-+..||
T Consensus 34 ~~~vSr~tvr~Al~~L~~~Gli~~~~~~G~~V 65 (69)
T d2hs5a1 34 ALDVSRNTVREAFQILIEDRLVAHELNRGVFV 65 (69)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEETTTEEEE
T ss_pred HHCCCHHHHHHHHHHHHHCCcEEEEcCCEEEe
Confidence 356677888999999999999997 4445554
No 33
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=26.59 E-value=16 Score=22.52 Aligned_cols=26 Identities=19% Similarity=0.009 Sum_probs=18.7
Q ss_pred CCCCeEEECCCCHHHHHHHHHHhhhCC
Q psy14514 38 PYSGFYQDLSANHNDFLAQLDMLRKGG 64 (91)
Q Consensus 38 ~gGGYv~~L~~~~~~a~~~L~~L~~~~ 64 (91)
++||+++-|..+ +....+++.|++.+
T Consensus 102 GgGG~~ial~~~-~~~~~~~~~l~~~~ 127 (137)
T d1kkha2 102 GGGGCVIILVNE-EKEKELLKELNKED 127 (137)
T ss_dssp SSSEEEEEECCG-GGHHHHHHHHHTSS
T ss_pred CCCcEEEEEeCh-hhHHHHHHHHHHcC
Confidence 347999888764 56667888887754
No 34
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=26.55 E-value=26 Score=20.38 Aligned_cols=34 Identities=26% Similarity=0.440 Sum_probs=24.7
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCCC-----cEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRAT-----RVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~T-----RAvfvEFt 78 (91)
.++-++.....+++.|.+.+||-+.+ |.+.|..|
T Consensus 55 ~l~i~~~~vs~~l~~L~~~glI~~~~~~~D~R~~~l~lT 93 (140)
T d3deua1 55 AIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLT 93 (140)
T ss_dssp HHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEEC
T ss_pred HHCCCHhHHHHHHHHHHhCCCEEecccCCCCCceeeEEC
Confidence 46778888999999999999996543 55555554
No 35
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=25.76 E-value=27 Score=20.50 Aligned_cols=34 Identities=29% Similarity=0.484 Sum_probs=26.9
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
.++-++..+...++.|.+.+||.+. -|++.|..|
T Consensus 57 ~~~i~~~~vs~~v~~L~~~glv~r~~~~~D~R~~~i~lT 95 (138)
T d1jgsa_ 57 VLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLT 95 (138)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEEC
T ss_pred HHCCCHhHHHHHHHHHhhCCCEEEeeccCCCCeeEEEEC
Confidence 4567788999999999999999752 577777665
No 36
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=25.13 E-value=39 Score=19.70 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=27.1
Q ss_pred ECCCCHHHHHHHHHHhhhCCccc-----CCCcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWIT-----RATRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD-----~~TRAvfvEFt 78 (91)
.++-++......++.|.+.+||. .--|.+.|..|
T Consensus 58 ~~~i~~~~vs~~l~~L~~~glv~r~~~~~D~R~~~v~lT 96 (143)
T d1s3ja_ 58 RMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLT 96 (143)
T ss_dssp HHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEEC
T ss_pred HHCcCHHHHHHHHHHHHHhhhheeeeecCCCCceEEEEC
Confidence 45677889999999999999996 35677777665
No 37
>d2qswa1 d.58.18.13 (A:256-345) Methionine import ATP-binding protein MetN2 {Enterococcus faecalis [TaxId: 1351]}
Probab=24.91 E-value=36 Score=19.16 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=27.8
Q ss_pred ccceeeecCC---CCeEEECCCCHHHHHHHHHHhhhCC
Q psy14514 30 YTGQVGSYPY---SGFYQDLSANHNDFLAQLDMLRKGG 64 (91)
Q Consensus 30 ~~G~~~~Y~g---GGYv~~L~~~~~~a~~~L~~L~~~~ 64 (91)
.+|.+..-.| |--++.|..+.++..+.+++|++.+
T Consensus 44 L~g~i~~i~~~~~G~L~l~l~G~~~~i~~al~~L~~~~ 81 (90)
T d2qswa1 44 IQGNIQQTKQGAVGSLYIQLLGEEQNILAAIEGLRKLR 81 (90)
T ss_dssp EEEEEEEETTEEEEEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred EEEEeEEeCCccEEEEEEEEECCHHHHHHHHHHHHHCC
Confidence 4577777777 4446899889999999999999874
No 38
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.27 E-value=24 Score=19.02 Aligned_cols=25 Identities=12% Similarity=0.214 Sum_probs=21.9
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA 69 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~ 69 (91)
.|+-++......++.|.+.+||...
T Consensus 32 ~L~vs~~SVt~mvkrL~~~Glv~~~ 56 (63)
T d2isya1 32 RLDQSGPTVSQTVSRMERDGLLRVA 56 (63)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEC
T ss_pred HhCCCchhHHHHHHHHHHCCCEEEc
Confidence 4788889999999999999999864
No 39
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=23.29 E-value=21 Score=20.95 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=26.1
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
.++.++......++.|.+.++|.+. .|.+.|..|
T Consensus 57 ~l~~~~~~~s~~l~~L~~~Gli~r~~~~~D~R~~~l~lT 95 (136)
T d2bv6a1 57 ELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLT 95 (136)
T ss_dssp HTTCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEEC
T ss_pred HHCCCHhHHHHHHHHHHHCCCEEEeecCCcccchhhccC
Confidence 4677778889999999999999753 466666554
No 40
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=22.98 E-value=51 Score=17.22 Aligned_cols=35 Identities=9% Similarity=0.035 Sum_probs=24.1
Q ss_pred CeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 41 GFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 41 GYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
||.+--=.+.++|.+.++.|....+- -|.+-|+++
T Consensus 45 g~afV~f~~~~~A~~ai~~lng~~~~---g~~l~v~~a 79 (82)
T d1b7fa1 45 GYAFVDFTSEMDSQRAIKVLNGITVR---NKRLKVSYA 79 (82)
T ss_dssp SEEEEEESSHHHHHHHHHHHTTCEET---TEECEEEEC
T ss_pred ccceEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEc
Confidence 56544445789999999999876553 355666654
No 41
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=22.73 E-value=53 Score=18.96 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=26.7
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccC-----CCcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITR-----ATRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~-----~TRAvfvEFt 78 (91)
.++-++.....+++.|.+.+||.+ --|.+.|..|
T Consensus 55 ~l~i~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~l~lT 93 (140)
T d2etha1 55 FLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLT 93 (140)
T ss_dssp HTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEEC
T ss_pred HHCcCHHHHHHHHHHHHHCCCeeeeecccccchhhhhcC
Confidence 467788999999999999999975 3455666554
No 42
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.49 E-value=56 Score=17.40 Aligned_cols=37 Identities=11% Similarity=-0.013 Sum_probs=24.8
Q ss_pred CCeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 40 SGFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 40 GGYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
.||.+-==.+.++|.+.+..|....=.| -|.+-|+|+
T Consensus 48 ~~~afV~f~~~~~A~~A~~~l~~~~i~~--g~~l~v~~s 84 (88)
T d2adca2 48 RKMALIQMGSVEEAVQALIDLHNHDLGE--NHHLRVSFS 84 (88)
T ss_dssp TTCEEEEESSHHHHHHHHHHHTTCBSSS--SCBCEEEEC
T ss_pred cceeEEEECCHHHHHHHHHhccCCEecC--CCEEEEEeC
Confidence 4664433356789999999997755323 266888875
No 43
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.84 E-value=44 Score=18.28 Aligned_cols=35 Identities=14% Similarity=0.141 Sum_probs=24.8
Q ss_pred CeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 41 GFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 41 GYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
||.+--=.+.++|...++.|....+- .|.+.|||+
T Consensus 50 g~afV~f~~~~~A~~Ai~~l~g~~~~---gr~i~V~~a 84 (93)
T d1h2vz_ 50 GFCFVEYYSRADAENAMRYINGTRLD---DRIIRTDWD 84 (93)
T ss_dssp EEEEEEESSHHHHHHHHHHTTTSEET---TEECEEEEE
T ss_pred ceEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEc
Confidence 46433335788999999999766553 467888885
No 44
>d1tzza1 c.1.11.2 (A:1146-1392) Hypothetical protein Bll6730 {Bradyrhizobium japonicum [TaxId: 375]}
Probab=21.78 E-value=25 Score=22.73 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=18.4
Q ss_pred eeeecCCCCeEEECCCCHHHHHHHHHHhhhCCc
Q psy14514 33 QVGSYPYSGFYQDLSANHNDFLAQLDMLRKGGW 65 (91)
Q Consensus 33 ~~~~Y~gGGYv~~L~~~~~~a~~~L~~L~~~~W 65 (91)
.+-+|.+|||... +.+.++..+.++.+.+.++
T Consensus 5 kv~vYas~g~~~~-~~~~~~~~~~~~~~~~~Gf 36 (247)
T d1tzza1 5 RVFVYAAGGYYYP-GKGLSMLRGEMRGYLDRGY 36 (247)
T ss_dssp EEEEEEECCCC-----CHHHHHHHHHHHHTTTC
T ss_pred ceEEEEeCCcCCC-CcCHHHHHHHHHHHHHcCC
Confidence 3456776775544 5667777777777766543
No 45
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=21.72 E-value=52 Score=18.80 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=26.8
Q ss_pred EECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 44 QDLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 44 ~~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
..++.++..+...++.|.+.+||.+. -|++.|..|
T Consensus 53 ~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT 92 (135)
T d3broa1 53 SEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLT 92 (135)
T ss_dssp HHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEEC
T ss_pred HHHCcCHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccc
Confidence 35678889999999999999999653 455555543
No 46
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.66 E-value=33 Score=19.57 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=24.8
Q ss_pred CeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 41 GFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 41 GYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
||++--=.+.++|.+.++.|. .+|++ .|.|.|||+
T Consensus 69 G~~fV~f~~~~~A~~Ai~~ln-g~~~~--gr~i~v~~s 103 (104)
T d1jmta_ 69 GNVYVKFRREEDAEKAVIDLN-NRWFN--GQPIHAELS 103 (104)
T ss_dssp EEEEEEESCHHHHHHHHHHHT-TCEET--TEECCEEEC
T ss_pred eEEEEEEechhHHHHHHHHHC-CCEEC--CEEEEEEEC
Confidence 665544467889999999985 55664 456777775
No 47
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]}
Probab=21.46 E-value=60 Score=19.90 Aligned_cols=42 Identities=17% Similarity=0.048 Sum_probs=32.7
Q ss_pred eecCCCCeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEE
Q psy14514 35 GSYPYSGFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFID 76 (91)
Q Consensus 35 ~~Y~gGGYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvE 76 (91)
...++||--+.+=.+.++..+.++.+....+......-|+||
T Consensus 43 P~~~~gs~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~vliE 84 (220)
T d1vkza3 43 ADGLARGKGVLILDSKEETIEKGSKLIIGELIKGVKGPVVID 84 (220)
T ss_dssp ESSCCSSCCEEEESSHHHHHHHHHHHHHTSSSTTCCSCEEEE
T ss_pred eccccccccceeeccHHHHHHHhhhhccccccccccceEeee
Confidence 355666665666678899999999999988887777778777
No 48
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.09 E-value=59 Score=17.41 Aligned_cols=39 Identities=10% Similarity=-0.063 Sum_probs=26.6
Q ss_pred CeEEECCCCHHHHHHHHHHhhhCCcccC---CCcEEEEEeee
Q psy14514 41 GFYQDLSANHNDFLAQLDMLRKGGWITR---ATRVVFIDFSM 79 (91)
Q Consensus 41 GYv~~L~~~~~~a~~~L~~L~~~~WiD~---~TRAvfvEFtl 79 (91)
||.+--=.+.++|.+.++.|....+.+. .-|.|-|+++.
T Consensus 51 g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~v~~a~ 92 (98)
T d1x4ha1 51 GCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAV 92 (98)
T ss_dssp SEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEEEECCC
T ss_pred ceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEEEEECC
Confidence 4543333678899999999876655543 34678888764
No 49
>d2p8ta1 a.4.5.72 (A:14-82) Hypothetical protein PH0730 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=20.99 E-value=40 Score=18.77 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHHhhhCCcccCCCcEEEE
Q psy14514 46 LSANHNDFLAQLDMLRKGGWITRATRVVFI 75 (91)
Q Consensus 46 L~~~~~~a~~~L~~L~~~~WiD~~TRAvfv 75 (91)
|+-+....+..++.|++.+.||-.++..++
T Consensus 27 L~l~Er~vRte~~~Lk~~gLI~~~~~Gm~l 56 (69)
T d2p8ta1 27 LELGEGSVRTLLRKLSHLDIIRSKQRGHFL 56 (69)
T ss_dssp HTCCHHHHHHHHHHHHHTTSEEEC--CEEE
T ss_pred cCCcHHHHHHHHHHHHHCCCeeeeCCCCEE
Confidence 455667788899999999999998877664
No 50
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.77 E-value=65 Score=17.47 Aligned_cols=35 Identities=14% Similarity=0.103 Sum_probs=24.8
Q ss_pred CeEEECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEee
Q psy14514 41 GFYQDLSANHNDFLAQLDMLRKGGWITRATRVVFIDFS 78 (91)
Q Consensus 41 GYv~~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFt 78 (91)
||.+--=.+.++|...++.|....+ .-|.+.|+|+
T Consensus 61 g~~fV~f~~~~~A~~Ai~~l~g~~~---~g~~l~V~~a 95 (102)
T d2cpxa1 61 GQAFITFPNKEIAWQALHLVNGYKL---YGKILVIEFG 95 (102)
T ss_dssp SEEEEECSSHHHHHHHHHHSTTCBC---SSCBCEEEEC
T ss_pred ccceEEeccHHHHHHHHHHhCCCEE---CCEEEEEEeC
Confidence 6654333578899999999876655 3466888876
No 51
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.58 E-value=30 Score=20.05 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=26.3
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCC-----CcEEEEEee
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRA-----TRVVFIDFS 78 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~-----TRAvfvEFt 78 (91)
.++-++.....+++.|.+.+||.+. -|++.|..|
T Consensus 52 ~~~~~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~i~lT 90 (137)
T d2fbha1 52 SVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLT 90 (137)
T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEEC
T ss_pred HHCCCHHHHHHHHHHHHHcCCccccCCCCCCCchhhhcC
Confidence 4677888999999999999999863 355555544
No 52
>d1zl0a1 c.8.10.1 (A:170-307) LD-carboxypeptidase A, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.42 E-value=86 Score=18.77 Aligned_cols=38 Identities=11% Similarity=-0.045 Sum_probs=31.5
Q ss_pred ECCCCHHHHHHHHHHhhhCCcccCCCcEEEEEeeeeec
Q psy14514 45 DLSANHNDFLAQLDMLRKGGWITRATRVVFIDFSMYNA 82 (91)
Q Consensus 45 ~L~~~~~~a~~~L~~L~~~~WiD~~TRAvfvEFtlYN~ 82 (91)
+.+.....-.+.|.+|+.++++|.-.-.||=+|+-.++
T Consensus 49 d~~e~~~~idR~L~~L~~~G~~~~v~giv~G~f~~~~~ 86 (138)
T d1zl0a1 49 DVGEPYYRLERSLWQLLESIDARQLGAICLGSFTDCPR 86 (138)
T ss_dssp EESCCHHHHHHHHHHHHHHTTGGGCSEEEEEEEETCCC
T ss_pred ccCCCchHHHHHHHHHHhcCCccccCEEEEcccCCCCC
Confidence 45666777888999999999999999888889986544
Done!