Your job contains 1 sequence.
>psy14515
MLKHVNIKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQL
SSHYDAIYIHPSSYKLSLLSAGSTIELRRNQKRNGSHSSSYKLSLLSAGSTIELVDNICR
GEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQAT
QQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYM
AVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSERPKIWKEGKQCL
VLALKHIVPQNSILSNLDRASRRFKLLTFVHLPAENTDVPLLFLLQIPGCYPHRTKSKGM
SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA
QGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKVIIIINNNN
SVYLYCSHRTENPFAFLSFLSLKNITETILNCIYEHRPYWNCYKFQDISTEGAHSSPLHI
PRAEFKYEGNPKQEIYATRDCYPIQSQEFVRLCDERLDSLIASKSV
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14515
(586 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 558 1.2e-125 5
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 441 3.4e-95 5
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 446 3.4e-92 4
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 435 4.8e-91 4
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 435 5.2e-91 4
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 449 5.4e-89 4
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 438 1.0e-87 3
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 431 1.7e-87 3
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 430 5.5e-85 3
UNIPROTKB|E2RSA8 - symbol:HDAC10 "Uncharacterized protein... 436 1.4e-82 3
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 456 3.2e-82 3
UNIPROTKB|F1RXT2 - symbol:LOC100518786 "Uncharacterized p... 440 1.3e-80 3
UNIPROTKB|I3LDD6 - symbol:LOC100518786 "Uncharacterized p... 440 1.3e-80 3
UNIPROTKB|Q0VD49 - symbol:HDAC10 "Uncharacterized protein... 430 8.8e-80 3
MGI|MGI:2158340 - symbol:Hdac10 "histone deacetylase 10" ... 432 1.2e-78 3
UNIPROTKB|Q969S8 - symbol:HDAC10 "Histone deacetylase 10"... 424 1.6e-78 3
UNIPROTKB|H9KZJ3 - symbol:HDAC10 "Uncharacterized protein... 451 6.2e-75 3
UNIPROTKB|E2RS82 - symbol:HDAC10 "Uncharacterized protein... 419 4.7e-68 2
UNIPROTKB|C9J8B8 - symbol:HDAC10 "Histone deacetylase 10"... 498 4.5e-67 3
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 436 1.4e-65 2
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 436 1.5e-65 2
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 436 1.5e-65 2
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 371 4.0e-61 4
TAIR|locus:2159461 - symbol:HDA18 "AT5G61070" species:370... 392 5.5e-60 3
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 380 7.4e-58 2
RGD|1305874 - symbol:Hdac10 "histone deacetylase 10" spec... 424 1.5e-57 3
POMBASE|SPBC800.03 - symbol:clr3 "histone deacetylase (cl... 344 7.7e-56 3
UNIPROTKB|E7EUZ1 - symbol:HDAC6 "Histone deacetylase 6" s... 437 2.6e-55 2
UNIPROTKB|F5GX36 - symbol:HDAC4 "Histone deacetylase 4" s... 385 1.3e-54 2
UNIPROTKB|I3L961 - symbol:I3L961 "Uncharacterized protein... 426 1.6e-54 3
UNIPROTKB|F1MYR0 - symbol:HDAC4 "Uncharacterized protein"... 391 5.3e-54 2
UNIPROTKB|Q9UKV0 - symbol:HDAC9 "Histone deacetylase 9" s... 382 8.3e-54 2
UNIPROTKB|G4NCI1 - symbol:MGG_01076 "Histone deacetylase ... 323 1.3e-53 2
UNIPROTKB|I3LKB5 - symbol:I3LKB5 "Uncharacterized protein... 426 1.5e-53 3
RGD|619979 - symbol:Hdac4 "histone deacetylase 4" species... 388 1.9e-53 2
UNIPROTKB|P56524 - symbol:HDAC4 "Histone deacetylase 4" s... 385 1.9e-53 2
MGI|MGI:3036234 - symbol:Hdac4 "histone deacetylase 4" sp... 389 2.1e-53 2
UNIPROTKB|F6X8E7 - symbol:HDAC9 "Uncharacterized protein"... 381 4.6e-53 2
UNIPROTKB|F1PRU6 - symbol:HDAC4 "Uncharacterized protein"... 383 5.4e-53 2
ZFIN|ZDB-GENE-061013-95 - symbol:hdac4 "histone deacetyla... 368 2.5e-52 3
UNIPROTKB|F1NP26 - symbol:HDAC4 "Histone deacetylase 4" s... 371 2.5e-52 3
UNIPROTKB|F1NWX8 - symbol:HDAC4 "Histone deacetylase 4" s... 380 3.4e-52 2
UNIPROTKB|P83038 - symbol:HDAC4 "Histone deacetylase 4" s... 380 3.5e-52 2
UNIPROTKB|F1S1J4 - symbol:HDAC5 "Uncharacterized protein"... 373 4.5e-52 2
UNIPROTKB|F1NES1 - symbol:HDAC4 "Histone deacetylase 4" s... 377 7.9e-52 2
UNIPROTKB|F1LM64 - symbol:Hdac5 "Protein Hdac5" species:1... 376 2.0e-51 2
UNIPROTKB|F1LSL9 - symbol:Hdac5 "Protein Hdac5" species:1... 376 2.0e-51 2
MGI|MGI:1333784 - symbol:Hdac5 "histone deacetylase 5" sp... 380 2.1e-51 2
UNIPROTKB|Q9UQL6 - symbol:HDAC5 "Histone deacetylase 5" s... 376 2.9e-51 2
UNIPROTKB|F1MNA5 - symbol:HDAC5 "Uncharacterized protein"... 374 5.3e-51 2
UNIPROTKB|E1C7C0 - symbol:HDAC9 "Uncharacterized protein"... 355 6.1e-51 2
UNIPROTKB|J9P9N5 - symbol:HDAC5 "Uncharacterized protein"... 373 6.2e-51 2
UNIPROTKB|F1P6I3 - symbol:HDAC5 "Uncharacterized protein"... 373 6.8e-51 2
UNIPROTKB|Q80ZH1 - symbol:HDAC5 "Histone deacetylase 5" s... 374 8.2e-51 2
UNIPROTKB|Q5R902 - symbol:HDAC5 "Histone deacetylase 5" s... 371 1.3e-50 2
UNIPROTKB|I3LM52 - symbol:HDAC4 "Uncharacterized protein"... 365 4.4e-50 2
FB|FBgn0041210 - symbol:HDAC4 "HDAC4" species:7227 "Droso... 347 4.7e-50 2
UNIPROTKB|F1LSN5 - symbol:F1LSN5 "Uncharacterized protein... 345 8.5e-50 4
UNIPROTKB|H9KZE7 - symbol:H9KZE7 "Uncharacterized protein... 349 1.0e-49 3
UNIPROTKB|F1PK81 - symbol:HDAC7 "Uncharacterized protein"... 338 2.8e-49 3
MGI|MGI:1891835 - symbol:Hdac7 "histone deacetylase 7" sp... 339 4.3e-49 4
UNIPROTKB|F1LQG9 - symbol:Hdac5 "Protein Hdac5" species:1... 355 5.5e-49 2
UNIPROTKB|Q8WUI4 - symbol:HDAC7 "Histone deacetylase 7" s... 341 6.5e-49 3
UNIPROTKB|F1N616 - symbol:HDAC7 "Uncharacterized protein"... 339 7.0e-49 3
UNIPROTKB|J3KPH8 - symbol:HDAC7 "Histone deacetylase 7" s... 341 9.2e-49 3
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370... 309 3.1e-48 3
WB|WBGene00001838 - symbol:hda-10 species:6239 "Caenorhab... 302 1.8e-45 4
WB|WBGene00001837 - symbol:hda-4 species:6239 "Caenorhabd... 317 9.0e-45 2
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 396 2.7e-44 3
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 396 2.7e-44 3
ASPGD|ASPL0000014944 - symbol:hdaA species:162425 "Emeric... 348 1.4e-34 3
UNIPROTKB|Q3Z9M2 - symbol:DET0330 "Histone deacetylase fa... 254 1.8e-34 2
TIGR_CMR|DET_0330 - symbol:DET_0330 "histone deacetylase ... 254 1.8e-34 2
UNIPROTKB|E7EPS2 - symbol:HDAC6 "Histone deacetylase 6" s... 243 3.0e-33 2
UNIPROTKB|F1MWS5 - symbol:HDAC9 "Uncharacterized protein"... 374 1.1e-31 1
UNIPROTKB|E1BQQ2 - symbol:Gga.27678 "Uncharacterized prot... 349 2.0e-31 1
TIGR_CMR|SPO_0250 - symbol:SPO_0250 "histone deacetylase ... 231 1.1e-30 2
UNIPROTKB|Q604Q2 - symbol:MCA2486 "Histone deacetylase/Ac... 228 3.8e-30 2
TAIR|locus:2119201 - symbol:HDA14 "AT4G33470" species:370... 227 6.1e-30 2
UNIPROTKB|F1SEI2 - symbol:HDAC9 "Uncharacterized protein"... 316 9.7e-28 1
UNIPROTKB|Q5LQF5 - symbol:SPO2535 "Histone deacetylase/Ac... 211 8.6e-27 2
TIGR_CMR|SPO_2535 - symbol:SPO_2535 "histone deacetylase/... 211 8.6e-27 2
TIGR_CMR|CHY_0263 - symbol:CHY_0263 "histone deacetylase ... 247 1.0e-26 2
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370... 269 1.2e-25 3
TIGR_CMR|SPO_3195 - symbol:SPO_3195 "histone deacetylase ... 228 1.2e-24 2
TIGR_CMR|SPO_A0096 - symbol:SPO_A0096 "histone deacetylas... 216 7.6e-23 2
UNIPROTKB|Q484X2 - symbol:CPS_1655 "Histone deacetylase f... 182 3.4e-21 2
TIGR_CMR|CPS_1655 - symbol:CPS_1655 "histone deacetylase ... 182 3.4e-21 2
UNIPROTKB|Q4K950 - symbol:aphA_2 "Acetylpolyamine aminohy... 224 4.5e-21 2
UNIPROTKB|Q4K3I0 - symbol:aphA_3 "Acetylpolyamine aminohy... 223 7.5e-20 2
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd... 188 2.2e-19 2
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c... 194 2.7e-19 3
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 179 3.1e-19 3
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 179 3.1e-19 3
DICTYBASE|DDB_G0280195 - symbol:hdaC "type-2 histone deac... 188 6.2e-19 2
DICTYBASE|DDB_G0279267 - symbol:hdaD "type-2 histone deac... 193 6.9e-19 2
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 193 9.6e-19 2
UNIPROTKB|Q4KAJ1 - symbol:aphA_1 "Acetylpolyamine aminohy... 218 1.1e-18 2
UNIPROTKB|H0YH91 - symbol:HDAC7 "Histone deacetylase 7" s... 235 1.9e-18 2
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac... 193 2.2e-18 3
WARNING: Descriptions of 111 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 558 (201.5 bits), Expect = 1.2e-125, Sum P(5) = 1.2e-125
Identities = 97/143 (67%), Positives = 118/143 (82%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIV 170
TIELVD++ G+ +NGMA+IRPPGHHAMK+EY GYCFFNNVALA QHALD + R+LI+
Sbjct: 222 TIELVDHLVAGKAQNGMAIIRPPGHHAMKAEYNGYCFFNNVALATQHALDVHKLQRILII 281
Query: 171 DWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN 230
D+DVHHGQ TQ+ FYND RVVYFSIHR+EHG+FWP+L ES+Y IG G G GYNFN+PLN
Sbjct: 282 DYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLN 341
Query: 231 KTHMKDADYMAVFHQVLLPMVAE 253
T M + DY+A+F Q+LLP+ E
Sbjct: 342 ATGMTNGDYLAIFQQLLLPVALE 364
Score = 406 (148.0 bits), Expect = 9.5e-93, Sum P(4) = 9.5e-93
Identities = 68/142 (47%), Positives = 102/142 (71%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++ VD++ RGE ++G+ +RPPGHHA + G+C FNNVA+AAQ+A+ + + RVLIVD
Sbjct: 650 LQAVDSVLRGESRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVD 709
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHG TQ +F ++ +V+Y S+HRYEHG+F+P + +D +G+G G+G+N NIP NK
Sbjct: 710 WDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNK 769
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M D +Y F Q+++P+ E
Sbjct: 770 KGMGDLEYALAFQQLIMPIAYE 791
Score = 391 (142.7 bits), Expect = 1.2e-125, Sum P(5) = 1.2e-125
Identities = 70/97 (72%), Positives = 82/97 (84%)
Query: 358 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 417
KGM D EY AFQQ+I+PIAY+FNP+LVLVSAG+DA + DPLGGCKV+ E Y THWL
Sbjct: 770 KGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLS 829
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
ALA GRII+ LEGGYN++SISYAMT+CTK LLGDP+P
Sbjct: 830 ALASGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVP 866
Score = 240 (89.5 bits), Expect = 4.2e-101, Sum P(4) = 4.2e-101
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM++ +Y+A FQQ++LP+A +F PEL++VSAGYDA + P G +V+P Y H + L
Sbjct: 344 GMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLR 403
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP-LLES 458
LA R+ + LEGGY + S++ L ++LLGDP P L+E+
Sbjct: 404 LADARVAVVLEGGYCLDSLAEGAALTLRSLLGDPCPPLVET 444
Score = 219 (82.2 bits), Expect = 1.2e-125, Sum P(5) = 1.2e-125
Identities = 42/85 (49%), Positives = 60/85 (70%)
Query: 3 KHVNIKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSS 62
+ + + C+EL L +RC + R AT++EIL+ HT E E L T G D + +E+LSS
Sbjct: 141 RFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKETSGIRDDERMEELSS 200
Query: 63 HYDAIYIHPSSYKLSLLSAGSTIEL 87
YD+IYIHPS+++LSLL++GSTIEL
Sbjct: 201 RYDSIYIHPSTFELSLLASGSTIEL 225
Score = 132 (51.5 bits), Expect = 1.2e-125, Sum P(5) = 1.2e-125
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDDPCPNF-ETLGTPSERPKIWKEGKQCLVLALKH 306
+V EGGYCL SLAEGAALTLR+LL DPCP ET+ P R ++ + C+ + H
Sbjct: 411 VVLEGGYCLDSLAEGAALTLRSLLGDPCPPLVETVPLP--RAELAQALLSCIAVHRPH 466
Score = 100 (40.3 bits), Expect = 2.6e-80, Sum P(4) = 2.6e-80
Identities = 22/87 (25%), Positives = 46/87 (52%)
Query: 13 ELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPS 72
+ GL+++ K + PR AT +E+ HT + + G + L + Y+++Y+HP
Sbjct: 579 DYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE-LHDAAGIYNSVYLHPR 637
Query: 73 SYKLSLLSAGSTIE----LRRNQKRNG 95
++ + L+AG ++ + R + R+G
Sbjct: 638 TFDCATLAAGLVLQAVDSVLRGESRSG 664
Score = 69 (29.3 bits), Expect = 4.2e-101, Sum P(4) = 4.2e-101
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 505 ITETILNCIYEHRPYWNCYKFQD----ISTEGAHSSP-LHIPRAEFKYEGNPKQEIYATR 559
+ + +L+CI HRP+W C + Q + + LH + G P + Y TR
Sbjct: 452 LAQALLSCIAVHRPHWRCLQLQQTYDCVELQDRDKEEDLHTVLRHW-IGGPPPMDRYPTR 510
Query: 560 D 560
D
Sbjct: 511 D 511
Score = 60 (26.2 bits), Expect = 4.9e-79, Sum P(4) = 4.9e-79
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSERP 290
EGGY + S++ + + LL DP P + T ++P
Sbjct: 841 EGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKP 878
Score = 50 (22.7 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 549 GNPKQEIYATRDCYPIQSQEFVRLCDERL 577
G P+ E+ T CYP +RL D R+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLADARV 409
Score = 38 (18.4 bits), Expect = 1.2e-125, Sum P(5) = 1.2e-125
Identities = 5/26 (19%), Positives = 14/26 (53%)
Query: 500 LSLKNITETILNCIYEHRPYWNCYKF 525
++ ++ E++ C+ R +W +F
Sbjct: 881 VAFQSCVESLQQCLQVQRNHWRSLEF 906
Score = 38 (18.4 bits), Expect = 7.8e-116, Sum P(5) = 7.8e-116
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 348 PGCYPH 353
P CYPH
Sbjct: 391 PACYPH 396
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 441 (160.3 bits), Expect = 3.4e-95, Sum P(5) = 3.4e-95
Identities = 79/142 (55%), Positives = 102/142 (71%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + EI+NGMAVIRPPGHHA +S GYC FN++A+AA++A + R+LIVD
Sbjct: 191 LRLVDAVMGAEIRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVD 250
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ TQ +F D V+YFSIHRYEHG FWP+L+ S + G G G+GY N+P N+
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 310
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M+DADY+A F +LLP+ E
Sbjct: 311 VGMRDADYIAAFLHILLPVAFE 332
Score = 383 (139.9 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75
Identities = 68/141 (48%), Positives = 94/141 (66%)
Query: 114 LVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHA-LDNTSVSRVLIVDW 172
LV+ + GE+ NG+A++RPPGHHA CG+CFFN+VA+AA+HA + R+LIVDW
Sbjct: 591 LVEAVLSGEVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRALRILIVDW 650
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ +F D V+Y S+HRY+ GTF+P E +G G G+ N+P N
Sbjct: 651 DVHHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGP 710
Query: 233 HMKDADYMAVFHQVLLPMVAE 253
M DADY+A +H+++LP+ E
Sbjct: 711 RMGDADYLATWHRLVLPIAYE 731
Score = 349 (127.9 bits), Expect = 3.4e-95, Sum P(5) = 3.4e-95
Identities = 67/111 (60%), Positives = 83/111 (74%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M D +Y+A + +++LPIAY+FNPELVL+SAG+DA DPLGGC+V+PE YAH TH L L
Sbjct: 712 MGDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGL 771
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
A GRIIL LEGGYN++SIS +M CT +LLGDP P L S S A+ SI
Sbjct: 772 AGGRIILILEGGYNLTSISESMAACTHSLLGDPPPQLTSLRPPQSGALASI 822
Score = 276 (102.2 bits), Expect = 8.7e-81, Sum P(4) = 8.7e-81
Identities = 55/115 (47%), Positives = 79/115 (68%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPL---GGCKVSPEAYAHFTHW 415
GM D +YIAAF ++LP+A++F P+LVLV+AG+DA DP G +P +AH TH+
Sbjct: 312 GMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKVRQGEMSATPAGFAHLTHF 371
Query: 416 LKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
L LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES + +SA TSI
Sbjct: 372 LMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVAPCASAQTSI 426
Score = 143 (55.4 bits), Expect = 3.4e-95, Sum P(5) = 3.4e-95
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD++Y+HP+SY
Sbjct: 122 GLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRVLAGTYDSVYLHPNSY 180
Query: 75 KLSLLSAGSTIEL 87
+ L+ GS + L
Sbjct: 181 SCACLATGSVLRL 193
Score = 111 (44.1 bits), Expect = 2.4e-72, Sum P(4) = 2.4e-72
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E+GL RC + R A E+L H+ E +E L TE D L + +++++IYI P
Sbjct: 517 EEVGLAARCLILPARPALDSELLTCHSAEYVERLRATEKMKTRD-LHREGANFESIYICP 575
Query: 72 SSYKLSLLSAGSTIEL 87
S++ + L+ G+ L
Sbjct: 576 STFACAQLATGAACRL 591
Score = 83 (34.3 bits), Expect = 3.4e-95, Sum P(5) = 3.4e-95
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
EGGY L +LA+G + +L LL DPCP E+ P
Sbjct: 385 EGGYNLHALAKGVSGSLHTLLGDPCPMLESPVAP 418
Score = 73 (30.8 bits), Expect = 1.3e-59, Sum P(4) = 1.3e-59
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
++ EGGY L S++E A +LL DP P +L P
Sbjct: 778 LILEGGYNLTSISESMAACTHSLLGDPPPQLTSLRPP 814
Score = 39 (18.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 514 YEHRPYWNCYKFQDISTEG 532
YEH +W K + ST G
Sbjct: 277 YEHGRFWPHLKASNWSTTG 295
Score = 38 (18.4 bits), Expect = 3.4e-95, Sum P(5) = 3.4e-95
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 508 TILNCIYEHRPYWNCYKFQDISTEGAHSS 536
+I I HR YW + + + SS
Sbjct: 821 SISEVIQVHRKYWRSLRLMKMEDKEERSS 849
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 446 (162.1 bits), Expect = 3.4e-92, Sum P(4) = 3.4e-92
Identities = 90/176 (51%), Positives = 115/176 (65%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + R EI+NGMA++RPPGHHA S GYC FN+VA+AA++A ++ RVLIVD
Sbjct: 206 LRLVDAVLRNEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVD 265
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ TQ F D V+YFSIHRYE G FWP+L+ S + IG G G+GY N+P N+
Sbjct: 266 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 325
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 287
M+DADY+A F ++LLP+ E L +A G AL DP T TP+
Sbjct: 326 VGMRDADYIAAFLRLLLPVALEFQPQLVLVAAG----FDALQGDPKGEMAT--TPA 375
Score = 377 (137.8 bits), Expect = 5.5e-78, Sum P(4) = 5.5e-78
Identities = 67/141 (47%), Positives = 95/141 (67%)
Query: 114 LVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS-RVLIVDW 172
LV+ + E+ NG AV+RPPGHHA + CG+CFFN+VA+AA+HA + + R+LIVDW
Sbjct: 602 LVEAVLAREVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDW 661
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ +F D V+Y S+HRY+HGTF+P E +G+ G G+ N+ N
Sbjct: 662 DVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGP 721
Query: 233 HMKDADYMAVFHQVLLPMVAE 253
+ DADY+A +H+++LP+ E
Sbjct: 722 RVGDADYLAAWHRLVLPIAYE 742
Score = 356 (130.4 bits), Expect = 3.4e-92, Sum P(4) = 3.4e-92
Identities = 67/111 (60%), Positives = 85/111 (76%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
+ D +Y+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L L
Sbjct: 723 VGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGL 782
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
A GR++L LEGGYN++SIS +M CT++LLGDP PLL S A+ SI
Sbjct: 783 ANGRVVLILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASI 833
Score = 264 (98.0 bits), Expect = 8.0e-31, Sum P(3) = 8.0e-31
Identities = 49/100 (49%), Positives = 70/100 (70%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D +YIAAF +++LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 327 GMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMG 386
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLES 458
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES
Sbjct: 387 LAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPILES 426
Score = 158 (60.7 bits), Expect = 3.4e-92, Sum P(4) = 3.4e-92
Identities = 35/93 (37%), Positives = 58/93 (62%)
Query: 7 IKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
IK+ + GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD+
Sbjct: 129 IKEQLIQDGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRILADTYDS 187
Query: 67 IYIHPSSYKLSLLSAGSTIEL----RRNQKRNG 95
+Y+HP+SY + L++GS + L RN+ RNG
Sbjct: 188 VYLHPNSYTCACLASGSVLRLVDAVLRNEIRNG 220
Score = 116 (45.9 bits), Expect = 1.3e-73, Sum P(4) = 1.3e-73
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+ELGL RC + R AT E+L H+ E + L TE L + S++D+IYI P
Sbjct: 528 EELGLAGRCLTLPTRPATDAELLTCHSAEYVGRLRATE-KMKTRELHREGSNFDSIYICP 586
Query: 72 SSYKLSLLSAGSTIEL 87
S++ + L+ GS L
Sbjct: 587 STFACAQLATGSVCRL 602
Score = 95 (38.5 bits), Expect = 8.5e-48, Sum P(4) = 8.5e-48
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
EGGY L++LAEG + +L LL DPCP E+ P
Sbjct: 397 EGGYNLRALAEGVSASLHTLLGDPCPILESPSAP 430
Score = 74 (31.1 bits), Expect = 1.2e-48, Sum P(4) = 1.2e-48
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
++ EGGY L S++E A R+LL DP P TL P
Sbjct: 789 LILEGGYNLTSISESMAACTRSLLGDP-PPLLTLSRP 824
Score = 47 (21.6 bits), Expect = 3.4e-92, Sum P(4) = 3.4e-92
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 501 SLKNITETILNCIYEHRPYWNCYKFQDIST-EGAHSSPL 538
+L +ITETI HR YW + + EG +S L
Sbjct: 829 ALASITETI----QVHRRYWRSLRVMKVEDKEGPSTSEL 863
Score = 41 (19.5 bits), Expect = 3.3e-42, Sum P(4) = 3.3e-42
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 172 WDVHHGQATQQMF 184
WD HH + Q++F
Sbjct: 509 WDNHHPEMPQRVF 521
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 435 (158.2 bits), Expect = 4.8e-91, Sum P(4) = 4.8e-91
Identities = 90/176 (51%), Positives = 111/176 (63%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + EI+NGMA+IRPPGHHA S GYC FN+VA+AA++A + RVLIVD
Sbjct: 192 LRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 251
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ TQ F D V+YFSIHRYE G FWP+L+ S + G G G+GY N+P N+
Sbjct: 252 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 311
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 287
M+DADY+A F VLLP+ E L +A G AL DP E TP+
Sbjct: 312 VGMRDADYIAAFLHVLLPVALEFQPQLVLVAAG----FDALQGDP--KGEMAATPA 361
Score = 392 (143.0 bits), Expect = 1.6e-80, Sum P(4) = 1.6e-80
Identities = 71/141 (50%), Positives = 96/141 (68%)
Query: 114 LVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS-RVLIVDW 172
LV+ + GE+ NG AV+RPPGHHA + CG+CFFN+VA+AA+HA + + R+LIVDW
Sbjct: 589 LVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDW 648
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ MF +D V+Y S+HRY+HGTF+P E IG G G+ N+ N
Sbjct: 649 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 708
Query: 233 HMKDADYMAVFHQVLLPMVAE 253
M DADY+A +H+++LP+ E
Sbjct: 709 RMGDADYLAAWHRLVLPIAYE 729
Score = 361 (132.1 bits), Expect = 4.8e-91, Sum P(4) = 4.8e-91
Identities = 70/111 (63%), Positives = 85/111 (76%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M D +Y+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L L
Sbjct: 710 MGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGL 769
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
A GRIIL LEGGYN++SIS +M CT++LLGDP PLL S A+ SI
Sbjct: 770 ASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASI 820
Score = 266 (98.7 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 50/100 (50%), Positives = 69/100 (69%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D +YIAAF V+LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 313 GMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 372
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLES 458
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES
Sbjct: 373 LAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLES 412
Score = 151 (58.2 bits), Expect = 4.8e-91, Sum P(4) = 4.8e-91
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 7 IKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
IK+ + GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD+
Sbjct: 115 IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRVLADTYDS 173
Query: 67 IYIHPSSYKLSLLSAGSTIEL 87
+Y+HP+SY + L++GS + L
Sbjct: 174 VYLHPNSYSCACLASGSVLRL 194
Score = 126 (49.4 bits), Expect = 6.7e-78, Sum P(4) = 6.7e-78
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+ELGL RC + PR AT+ E+L H+ E + L TE L + SS++D+IYI P
Sbjct: 515 EELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATE-KMKTRELHRESSNFDSIYICP 573
Query: 72 SSYKLSLLSAGSTIEL 87
S++ + L+ G+ L
Sbjct: 574 STFACAQLATGAACRL 589
Score = 102 (41.0 bits), Expect = 9.3e-49, Sum P(4) = 9.3e-49
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
EGGY L++LAEG + +L LL DPCP E+ G P
Sbjct: 383 EGGYNLRALAEGVSASLHTLLGDPCPMLESPGAP 416
Score = 72 (30.4 bits), Expect = 2.0e-50, Sum P(4) = 2.0e-50
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
++ EGGY L S++E A R+LL DP P TL P
Sbjct: 776 LILEGGYNLTSISESMAACTRSLLGDP-PPLLTLPRP 811
Score = 51 (23.0 bits), Expect = 4.8e-91, Sum P(4) = 4.8e-91
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 501 SLKNITETILNCIYEHRPYWNCYKFQDIST-EGAHSSPLHIPRA 543
+L +ITETI HR YW + + EG SS L +A
Sbjct: 816 ALASITETI----QVHRRYWRSLRVMKVEDREGPSSSKLVTKKA 855
Score = 37 (18.1 bits), Expect = 4.9e-42, Sum P(4) = 4.9e-42
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 172 WDVHHGQATQQM 183
WD HH + Q++
Sbjct: 496 WDSHHPEVPQRI 507
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 435 (158.2 bits), Expect = 5.2e-91, Sum P(4) = 5.2e-91
Identities = 90/176 (51%), Positives = 111/176 (63%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + EI+NGMA+IRPPGHHA S GYC FN+VA+AA++A + RVLIVD
Sbjct: 206 LRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 265
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ TQ F D V+YFSIHRYE G FWP+L+ S + G G G+GY N+P N+
Sbjct: 266 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 325
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 287
M+DADY+A F VLLP+ E L +A G AL DP E TP+
Sbjct: 326 VGMRDADYIAAFLHVLLPVALEFQPQLVLVAAG----FDALQGDP--KGEMAATPA 375
Score = 392 (143.0 bits), Expect = 1.8e-80, Sum P(4) = 1.8e-80
Identities = 71/141 (50%), Positives = 96/141 (68%)
Query: 114 LVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS-RVLIVDW 172
LV+ + GE+ NG AV+RPPGHHA + CG+CFFN+VA+AA+HA + + R+LIVDW
Sbjct: 603 LVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDW 662
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ MF +D V+Y S+HRY+HGTF+P E IG G G+ N+ N
Sbjct: 663 DVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGP 722
Query: 233 HMKDADYMAVFHQVLLPMVAE 253
M DADY+A +H+++LP+ E
Sbjct: 723 RMGDADYLAAWHRLVLPIAYE 743
Score = 361 (132.1 bits), Expect = 5.2e-91, Sum P(4) = 5.2e-91
Identities = 70/111 (63%), Positives = 85/111 (76%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M D +Y+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L L
Sbjct: 724 MGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGL 783
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
A GRIIL LEGGYN++SIS +M CT++LLGDP PLL S A+ SI
Sbjct: 784 ASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASI 834
Score = 266 (98.7 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 50/100 (50%), Positives = 69/100 (69%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D +YIAAF V+LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 327 GMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 386
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLES 458
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES
Sbjct: 387 LAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLES 426
Score = 151 (58.2 bits), Expect = 5.2e-91, Sum P(4) = 5.2e-91
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 7 IKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
IK+ + GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD+
Sbjct: 129 IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRVLADTYDS 187
Query: 67 IYIHPSSYKLSLLSAGSTIEL 87
+Y+HP+SY + L++GS + L
Sbjct: 188 VYLHPNSYSCACLASGSVLRL 208
Score = 126 (49.4 bits), Expect = 7.2e-78, Sum P(4) = 7.2e-78
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+ELGL RC + PR AT+ E+L H+ E + L TE L + SS++D+IYI P
Sbjct: 529 EELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATE-KMKTRELHRESSNFDSIYICP 587
Query: 72 SSYKLSLLSAGSTIEL 87
S++ + L+ G+ L
Sbjct: 588 STFACAQLATGAACRL 603
Score = 102 (41.0 bits), Expect = 1.0e-48, Sum P(4) = 1.0e-48
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
EGGY L++LAEG + +L LL DPCP E+ G P
Sbjct: 397 EGGYNLRALAEGVSASLHTLLGDPCPMLESPGAP 430
Score = 72 (30.4 bits), Expect = 2.2e-50, Sum P(4) = 2.2e-50
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
++ EGGY L S++E A R+LL DP P TL P
Sbjct: 790 LILEGGYNLTSISESMAACTRSLLGDP-PPLLTLPRP 825
Score = 51 (23.0 bits), Expect = 5.2e-91, Sum P(4) = 5.2e-91
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 501 SLKNITETILNCIYEHRPYWNCYKFQDIST-EGAHSSPLHIPRA 543
+L +ITETI HR YW + + EG SS L +A
Sbjct: 830 ALASITETI----QVHRRYWRSLRVMKVEDREGPSSSKLVTKKA 869
Score = 37 (18.1 bits), Expect = 5.3e-42, Sum P(4) = 5.3e-42
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 172 WDVHHGQATQQM 183
WD HH + Q++
Sbjct: 510 WDSHHPEVPQRI 521
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 449 (163.1 bits), Expect = 5.4e-89, Sum P(4) = 5.4e-89
Identities = 91/176 (51%), Positives = 116/176 (65%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + EI+NGMAVIRPPGHHA + GYC FN++A+AA++A + RVLIVD
Sbjct: 191 LRLVDALMGAEIRNGMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVD 250
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ TQ +F D V+YFSIHRYEHG FWP+L+ S + IG G G+GY N+P N+
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 310
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 287
T M+DADY+A F +LLP+ +E L +A G AL DP E TP+
Sbjct: 311 TGMRDADYIAAFLHILLPVASEFQPQLVLVAAG----FDALHGDP--KGEMAATPA 360
Score = 384 (140.2 bits), Expect = 1.5e-75, Sum P(4) = 1.5e-75
Identities = 69/141 (48%), Positives = 96/141 (68%)
Query: 114 LVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHA-LDNTSVSRVLIVDW 172
LV+ + GE+ NG+AV+RPPGHHA + CG+CFFN+VA+AA+HA + R+LIVDW
Sbjct: 588 LVEAVLSGEVLNGIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVDW 647
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ +F +D V+Y S+HRY+ GTF+P E +G G G+ N+P N
Sbjct: 648 DVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGP 707
Query: 233 HMKDADYMAVFHQVLLPMVAE 253
M DADY+A +H+++LP+ E
Sbjct: 708 RMGDADYLAAWHRLVLPIAYE 728
Score = 347 (127.2 bits), Expect = 5.4e-89, Sum P(4) = 5.4e-89
Identities = 67/111 (60%), Positives = 83/111 (74%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M D +Y+AA+ +++LPIAY+FNPELVL+SAG+DA DPLGGC+V+PE YAH TH L L
Sbjct: 709 MGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGL 768
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
A GRIIL LEGGYN++SIS +M CT +LLGDP P L S A+ SI
Sbjct: 769 AGGRIILILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPPQSGALVSI 819
Score = 280 (103.6 bits), Expect = 4.4e-30, Sum P(3) = 4.4e-30
Identities = 55/112 (49%), Positives = 77/112 (68%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D +YIAAF ++LP+A +F P+LVLV+AG+DA DP G +P +AH TH L
Sbjct: 312 GMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMG 371
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
LA G++IL+LEGGYN+ +++ ++ LLGDP P+LES + +SA TSI
Sbjct: 372 LAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLESCVVPCASAQTSI 423
Score = 143 (55.4 bits), Expect = 5.4e-89, Sum P(4) = 5.4e-89
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD++Y+HP+SY
Sbjct: 122 GLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRVLAETYDSVYLHPNSY 180
Query: 75 KLSLLSAGSTIEL 87
+ L+ GS + L
Sbjct: 181 SCACLATGSVLRL 193
Score = 119 (46.9 bits), Expect = 4.9e-73, Sum P(4) = 4.9e-73
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E+GL RC + R A E+L H+ E +E L TTE D L + +++D+IYI P
Sbjct: 514 EEVGLAARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTRD-LHREGANFDSIYICP 572
Query: 72 SSYKLSLLSAGSTIEL 87
S++ + L+ G+ L
Sbjct: 573 STFACAKLATGAACRL 588
Score = 91 (37.1 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
EGGY L++LA+G + +L LL DPCP E+ P
Sbjct: 382 EGGYNLRALAKGVSASLHTLLGDPCPMLESCVVP 415
Score = 71 (30.1 bits), Expect = 7.8e-47, Sum P(4) = 7.8e-47
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
++ EGGY L S++E A +LL DP P L P
Sbjct: 775 LILEGGYNLASISESMAACTHSLLGDPPPQLTLLRPP 811
Score = 37 (18.1 bits), Expect = 5.4e-89, Sum P(4) = 5.4e-89
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 508 TILNCIYEHRPYWNCYKFQDIST-EGAHSSPLHIPR 542
+I I HR YW + + E SS L I +
Sbjct: 818 SISEVIQVHRKYWRSLRLMKMEDKEECSSSRLVIKK 853
Score = 37 (18.1 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 514 YEHRPYWNCYKFQDISTEG 532
YEH +W K + ST G
Sbjct: 277 YEHGRFWPHLKASNWSTIG 295
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 438 (159.2 bits), Expect = 1.0e-87, Sum P(3) = 1.0e-87
Identities = 91/176 (51%), Positives = 111/176 (63%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + EI+NGMA+IRPPGHHA S GYC FN+VALAA++A V RVLIVD
Sbjct: 202 LRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVD 261
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ TQ F D V+YFSIHRYE G FWP+L+ S + G G G+GY N+P N+
Sbjct: 262 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 321
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 287
M+DADY+A F +LLP+ E L +A G AL DP E TP+
Sbjct: 322 VGMRDADYIAAFLHLLLPVALEFQPQLVLVAAG----FDALQGDP--KGEMAATPA 371
Score = 381 (139.2 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
Identities = 67/141 (47%), Positives = 96/141 (68%)
Query: 114 LVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS-RVLIVDW 172
LV+ + GE+ NG+AV+RPPGHHA + CG+CFFN+VA+AA+HA + + R+LIVDW
Sbjct: 598 LVEAVLAGEVLNGIAVVRPPGHHAERDSACGFCFFNSVAVAARHAQAISGHALRILIVDW 657
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ +F D V+Y S+HRY+HGTF+P E IG+ G G+ N+ N
Sbjct: 658 DVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGP 717
Query: 233 HMKDADYMAVFHQVLLPMVAE 253
+ D +Y+A +H+++LP+ E
Sbjct: 718 RVGDPEYLAAWHRLVLPIAYE 738
Score = 353 (129.3 bits), Expect = 1.0e-87, Sum P(3) = 1.0e-87
Identities = 66/97 (68%), Positives = 79/97 (81%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
+ DPEY+AA+ +++LPIAY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L L
Sbjct: 719 VGDPEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPECYAHLTHLLMGL 778
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLL 456
A GRIIL LEGGYN+ SIS +M CT++LLGD PLL
Sbjct: 779 ANGRIILILEGGYNLISISESMAACTRSLLGDSPPLL 815
Score = 264 (98.0 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 50/99 (50%), Positives = 68/99 (68%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D +YIAAF ++LP+A +F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 323 GMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 382
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLE 457
LA G++IL+LEGGYN+ S++ ++ LLGDP PLLE
Sbjct: 383 LAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPLLE 421
Score = 152 (58.6 bits), Expect = 1.0e-87, Sum P(3) = 1.0e-87
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 7 IKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
IK+ + GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD+
Sbjct: 125 IKEQLMQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRVLADTYDS 183
Query: 67 IYIHPSSYKLSLLSAGSTIEL 87
+Y+HP+SY + L++GS + L
Sbjct: 184 VYLHPNSYTCACLASGSVLRL 204
Score = 113 (44.8 bits), Expect = 1.5e-72, Sum P(3) = 1.5e-72
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+ELGL RC + R AT E+L H+ E + + TE + L + ++YD+IYI P
Sbjct: 524 EELGLAGRCLALPARPATDAELLACHSAEYVSRIRATEKMRTRE-LHREGANYDSIYICP 582
Query: 72 SSYKLSLLSAGSTIEL 87
++ + L+AG+ L
Sbjct: 583 GTFACAQLAAGAACRL 598
Score = 101 (40.6 bits), Expect = 1.8e-46, Sum P(3) = 1.8e-46
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
EGGY L+SLAEG + +L LL DPCP E G P
Sbjct: 393 EGGYNLRSLAEGVSASLHTLLGDPCPLLEFPGAP 426
Score = 66 (28.3 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSER 289
++ EGGY L S++E A R+LL D P L P R
Sbjct: 785 LILEGGYNLISISESMAACTRSLLGDSPPLLTLLRPPLSR 824
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 431 (156.8 bits), Expect = 1.7e-87, Sum P(3) = 1.7e-87
Identities = 89/176 (50%), Positives = 110/176 (62%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + EI+NGMA+IRPPGHHA S GYC FN+VA+AA++A + RVLIVD
Sbjct: 192 LRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVD 251
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ Q F D V+YFSIHRYE G FWP+L+ S + G G G+GY N+P N+
Sbjct: 252 WDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQ 311
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPS 287
M+DADY+A F VLLP+ E L +A G AL DP E TP+
Sbjct: 312 VGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAG----FDALQGDP--KGEMAATPA 361
Score = 388 (141.6 bits), Expect = 3.4e-78, Sum P(3) = 3.4e-78
Identities = 69/141 (48%), Positives = 96/141 (68%)
Query: 114 LVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS-RVLIVDW 172
LV+ + GE+ NG+AV+RPPGHHA CG+CFFN+VA+AA+HA + + R+LIVDW
Sbjct: 589 LVEAVLAGEVLNGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDW 648
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG TQ +F D V+Y S+HRY+HGTF+P E IG+ G G+ N+ N
Sbjct: 649 DIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGP 708
Query: 233 HMKDADYMAVFHQVLLPMVAE 253
M DADY+A +H+++LP+ E
Sbjct: 709 RMGDADYLAAWHRLVLPVAYE 729
Score = 358 (131.1 bits), Expect = 1.7e-87, Sum P(3) = 1.7e-87
Identities = 65/97 (67%), Positives = 80/97 (82%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M D +Y+AA+ +++LP+AY+FNPELVLVSAG+DA DPLGGC+VSPE YAH TH L L
Sbjct: 710 MGDADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGL 769
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLL 456
A G IIL LEGGYN++SIS +M CT++LLGDPLPLL
Sbjct: 770 ANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLL 806
Score = 277 (102.6 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 51/100 (51%), Positives = 71/100 (71%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D +YIAAF V+LP+A++F P+LVLV+AG+DA DP G +P +A TH L
Sbjct: 313 GMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMG 372
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLES 458
LA+G++IL+LEGGYN+ S++ ++ LLGDP P+LES
Sbjct: 373 LAEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLES 412
Score = 152 (58.6 bits), Expect = 1.7e-87, Sum P(3) = 1.7e-87
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 7 IKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
IK+ + GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD+
Sbjct: 115 IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNE-EELHVLADTYDS 173
Query: 67 IYIHPSSYKLSLLSAGSTIEL 87
+Y+HP+SY + L++GS + L
Sbjct: 174 VYLHPNSYTCACLASGSVLRL 194
Score = 112 (44.5 bits), Expect = 5.4e-74, Sum P(3) = 5.4e-74
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 13 ELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPS 72
ELGL +RC + R AT E+L H+ E +E L TE L + ++YD+IYI S
Sbjct: 517 ELGLAKRCHSLPARPATDAELLC-HSAEHLERLRATE-KMKTRELRREGANYDSIYICSS 574
Query: 73 SYKLSLLSAGSTIEL 87
++ + L+AG+ L
Sbjct: 575 TFACAQLAAGAACRL 589
Score = 105 (42.0 bits), Expect = 1.5e-47, Sum P(3) = 1.5e-47
Identities = 21/34 (61%), Positives = 23/34 (67%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
EGGY L SLAEG + TL LL DPCP E+ G P
Sbjct: 383 EGGYNLHSLAEGVSATLHTLLGDPCPVLESPGAP 416
Score = 80 (33.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 228 PLNKTHMKDADYMAVFHQVL------LPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFE 281
PL + Y + HQ++ + ++ EGGY L S++E A R+LL DP P
Sbjct: 748 PLGGCQVSPEGYAHLTHQLMGLANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLLT 807
Query: 282 TLGTP 286
L P
Sbjct: 808 RLRPP 812
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 430 (156.4 bits), Expect = 5.5e-85, Sum P(3) = 5.5e-85
Identities = 78/165 (47%), Positives = 109/165 (66%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + +++NG ++ RPPGHHA + G+C FNN+A+AA++A V RVLIVD
Sbjct: 169 LQLVDKVMTSQLRNGFSINRPPGHHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVD 228
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ Q +F D V+YFS+HRYE G+FWP+L+ES+ +G G G+GYN N+P NK
Sbjct: 229 WDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNK 288
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDP 276
M+ DY+ F Q+LLP+ E L +A G A++ DP
Sbjct: 289 VGMESGDYITAFQQLLLPVAYEFQPQLVLVAAG----FDAVIGDP 329
Score = 412 (150.1 bits), Expect = 3.0e-81, Sum P(3) = 3.0e-81
Identities = 72/137 (52%), Positives = 95/137 (69%)
Query: 118 ICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS-RVLIVDWDVHH 176
I G+++N +A++RPPGHHA K CG+CFFN AL A++A T S RVLIVDWDVHH
Sbjct: 556 ILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHH 615
Query: 177 GQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKD 236
G TQ +F D+ V+Y S+HRYE G F+PN ++ YD +G G G+GYN NIP N M D
Sbjct: 616 GNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGD 675
Query: 237 ADYMAVFHQVLLPMVAE 253
+YMA FH +++P+ E
Sbjct: 676 PEYMAAFHHLVMPIARE 692
Score = 333 (122.3 bits), Expect = 5.5e-85, Sum P(3) = 5.5e-85
Identities = 63/111 (56%), Positives = 83/111 (74%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M DPEY+AAF +++PIA +F PELVLVSAG+DA DPLGG +V+PE YAH TH L +L
Sbjct: 673 MGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSL 732
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
A GR+++ LEGGYN++SIS +M++CT LLGD P L+ + +SA SI
Sbjct: 733 AAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSATVSI 783
Score = 307 (113.1 bits), Expect = 5.4e-35, Sum P(2) = 5.4e-35
Identities = 59/112 (52%), Positives = 80/112 (71%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM +YI AFQQ++LP+AY+F P+LVLV+AG+DA + DP GG +VSPE ++ TH LK
Sbjct: 290 GMESGDYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKG 349
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
+AQGR++LALEGGYN+ S + + ++LLGDP P L S SA+ SI
Sbjct: 350 VAQGRLVLALEGGYNLQSTAEGVCASMRSLLGDPCPHLPSSGAPCESALKSI 401
Score = 153 (58.9 bits), Expect = 5.5e-85, Sum P(3) = 5.5e-85
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
GL+ RC ++ R T++E+L HT E +EL+ +T+ T+ + L+ L+ YD++Y+HP +
Sbjct: 100 GLLGRCVQVEARAVTEDELLLVHTKEYVELMKSTQNMTE-EELKTLAEKYDSVYLHPGFF 158
Query: 75 KLSLLSAGSTIEL----RRNQKRNG 95
+ LS GS ++L +Q RNG
Sbjct: 159 SSACLSVGSVLQLVDKVMTSQLRNG 183
Score = 114 (45.2 bits), Expect = 3.8e-77, Sum P(3) = 3.8e-77
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+EL L+ RC I R AT+EE+ H+ + I ++ ++E D L +L Y++I+I
Sbjct: 478 EELRLLSRCHRIPARLATEEELALCHSSKHISIIKSSEHMKPRD-LNRLGDEYNSIFISN 536
Query: 72 SSYKLSLLSAGS 83
SY +LL+AGS
Sbjct: 537 ESYTCALLAAGS 548
Score = 107 (42.7 bits), Expect = 8.3e-45, Sum P(3) = 8.3e-45
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 248 LPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSE 288
L + EGGY L+S AEG ++R+LL DPCP+ + G P E
Sbjct: 355 LVLALEGGYNLQSTAEGVCASMRSLLGDPCPHLPSSGAPCE 395
Score = 63 (27.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 228 PLNKTHMKDADYMAVFHQVL------LPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFE 281
PL + Y + HQ++ + ++ EGGY L S++E ++ LL D P+ +
Sbjct: 711 PLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPPSLD 770
Query: 282 TLGTP 286
L TP
Sbjct: 771 HL-TP 774
Score = 42 (19.8 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 46/194 (23%), Positives = 77/194 (39%)
Query: 390 GYDACVNDPLGGCKVS-PEAYAHFTHWLKALAQG---RIILALEG----------GYNIS 435
GY+ VN P G K+ PE A F H + +A+ ++L G G+ ++
Sbjct: 661 GYN--VNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVT 718
Query: 436 SISYA-MTLCTKALL-GDPLPLLESDLDINSSAVTSIKVXXXXXXXXSVYLYCSHRTENP 493
YA +T +L G L +LE ++ S + S+ L ++P
Sbjct: 719 PEGYAHLTHQLMSLAAGRVLIILEGGYNLTS-------ISESMSMCTSMLL-----GDSP 766
Query: 494 FAFLSFLSLK-NITETILNCIYEHRPYWNCYKFQDISTEGAHSSPLHIPRAEFKYEGNPK 552
+ LK + T +I N + H P+W+ + +I S P P+ + G K
Sbjct: 767 PSLDHLTPLKTSATVSINNVLRAHAPFWSSLRV-NIPESLRLSLPSPKPKGKCTPGGKGK 825
Query: 553 QEIYATRDCYPIQS 566
+ + R P QS
Sbjct: 826 K---SPRQSTPSQS 836
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 436 (158.5 bits), Expect = 1.4e-82, Sum P(3) = 1.4e-82
Identities = 75/142 (52%), Positives = 103/142 (72%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G + NG+A++RPPGHH+ ++ G+C FNNVA+AA+HA + R+LIVD
Sbjct: 111 LQLVDAVLMGAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVD 170
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ Q +F +D V+YFS HRYEHG FWP LRES+ D +G+G G+G+ N+P N+
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQ 230
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M +ADY+A F VLLP+ E
Sbjct: 231 VGMGNADYLAAFLHVLLPVAFE 252
Score = 290 (107.1 bits), Expect = 1.4e-82, Sum P(3) = 1.4e-82
Identities = 52/113 (46%), Positives = 81/113 (71%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE + H T L+
Sbjct: 232 GMGNADYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQV 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA GR+ LEGGY++ S+S ++ + +ALLGDP+P L ++ + SA+ SI+
Sbjct: 292 LAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPMEPHRSALESIQ 344
Score = 144 (55.7 bits), Expect = 1.4e-82, Sum P(3) = 1.4e-82
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
GL QRC + PREA++ E+ H+ E + LL T+ + D L LS YDA+Y HPS++
Sbjct: 42 GLEQRCLQLAPREASEAELGLVHSPEYVSLLRGTQ-ALDTQELRALSGQYDAVYFHPSTF 100
Query: 75 KLSLLSAGSTIEL 87
+ L+ G+ ++L
Sbjct: 101 HCARLAVGAALQL 113
Score = 78 (32.5 bits), Expect = 4.8e-66, Sum P(4) = 4.8e-66
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 251 VAEGGYCLKSLAEGAALTLRALLDDPCP 278
V EGGY L+SL++ + +RALL DP P
Sbjct: 300 VLEGGYHLESLSQSVCMVVRALLGDPVP 327
Score = 66 (28.3 bits), Expect = 4.8e-66, Sum P(4) = 4.8e-66
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 424
+++ ++LP+AY F P+LVL+ G P G + P A A L+ A GR+
Sbjct: 556 FLSCVLALVLPLAYGFRPDLVLMVLG-------PAQGLQ-EPHA-ALLAALLRGPAGGRV 606
Query: 425 ILALEGGYNISSISYAMTLCTKALLGDPLPLL 456
++ +E S + + L GD P L
Sbjct: 607 LVLVEQ----EPTSQLAGILARVLHGDAPPSL 634
Score = 37 (18.1 bits), Expect = 5.1e-63, Sum P(4) = 5.1e-63
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLG 450
A GR L L GG + + +LLG
Sbjct: 373 ADGRTSLVLPGGPTFKAAEAQASAVLSSLLG 403
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 456 (165.6 bits), Expect = 3.2e-82, Sum P(3) = 3.2e-82
Identities = 78/143 (54%), Positives = 107/143 (74%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIV 170
T++LVD++ + E++NGMA++RPPGHH+ +S G+C FNNVA+AA +A N +++R+LIV
Sbjct: 165 TLQLVDSVMKREVRNGMALVRPPGHHSQRSAANGFCVFNNVAIAALYAKKNYNLNRILIV 224
Query: 171 DWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN 230
DWDVHHGQ Q F D V+YFS HRYEH +FWPNL ES+Y +G+G G G+N N+P N
Sbjct: 225 DWDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWN 284
Query: 231 KTHMKDADYMAVFHQVLLPMVAE 253
K M ++DY+A F VLLP+ E
Sbjct: 285 KVGMTNSDYLAAFFHVLLPVAYE 307
Score = 270 (100.1 bits), Expect = 3.2e-82, Sum P(3) = 3.2e-82
Identities = 55/136 (40%), Positives = 83/136 (61%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM++ +Y+AAF V+LP+AY+F+PELV+VSAG+D+ + DP G PE +AH TH L
Sbjct: 287 GMTNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLLMP 346
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK-VXXXXX 477
LA G++ + LEGGYN++S+ ++ +LLGDP P + SA+ SI+ V
Sbjct: 347 LAAGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDSALESIQNVRNVQS 406
Query: 478 XXXSVYLYCSHRTENP 493
S + + + NP
Sbjct: 407 SYWSSFKHLAQSETNP 422
Score = 145 (56.1 bits), Expect = 3.2e-82, Sum P(3) = 3.2e-82
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
GL QRCK + R+AT++EIL H+ E +E + T G +V+ L S Y+ +Y H + Y
Sbjct: 97 GLAQRCKAVPVRQATEQEILLAHSEEYLEAVKQTPGM-NVEELMAFSKKYNDVYFHQNIY 155
Query: 75 KLSLLSAGSTIEL----RRNQKRNG 95
+ L+AG+T++L + + RNG
Sbjct: 156 HCAKLAAGATLQLVDSVMKREVRNG 180
Score = 87 (35.7 bits), Expect = 3.2e-70, Sum P(4) = 3.2e-70
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 424
++ A +ILP+AY+FNP LVL G A + + H T ++ LA+GR
Sbjct: 614 FMQALLGLILPVAYEFNPALVLGIVGETAAKTGLM-------TVWGHMTCLIQGLARGRT 666
Query: 425 ILALEGGYNISSISYAMTLCTKALLGDPL-PL 455
+ L+G Y+ + ++ + A + PL PL
Sbjct: 667 LTLLQG-YDKDLLELTVSALSGASIS-PLGPL 696
Score = 82 (33.9 bits), Expect = 3.2e-70, Sum P(4) = 3.2e-70
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGT 285
+V EGGY L SL + T+ +LL DP P LGT
Sbjct: 354 VVLEGGYNLTSLGQSVCQTVHSLLGDPTPRISGLGT 389
Score = 38 (18.4 bits), Expect = 5.4e-71, Sum P(3) = 5.4e-71
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 45 LATTEGSTDVDALEQLSSHYDAIYIH 70
L T+ + +++ E+L+ Y+A+ H
Sbjct: 71 LLWTDPACEIEVPERLTVSYEALRTH 96
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 514 YEHRPYWNCYKFQDISTEG 532
YEH+ +W D S+ G
Sbjct: 252 YEHQSFWPNLPESDYSSVG 270
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 440 (159.9 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 76/142 (53%), Positives = 104/142 (73%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G ++NG+A++RPPGHH+ ++ G+C FN+VA+AA+HA + R+LIVD
Sbjct: 111 LQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVD 170
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WD+HHGQ TQ +F +D V+YFS HRYEHG FWP LRES+ D +G G G G+ N+P N+
Sbjct: 171 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 230
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M +ADYMA F QVLLP+ E
Sbjct: 231 VGMGNADYMAAFLQVLLPLAFE 252
Score = 279 (103.3 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 53/113 (46%), Positives = 79/113 (69%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF QV+LP+A++FN ELVLVSAG+D+ + D G + +PE +AH T L+
Sbjct: 232 GMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQV 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA GR+ LEGGY++ S+S ++ + +ALLGDP P L + + SA+ SI+
Sbjct: 292 LAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQ 344
Score = 133 (51.9 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
++ GL QRC + REA++ E+ H+ E + LL T+ + + L+ LS +DA+Y HP
Sbjct: 39 RQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQ-ALSTEELQALSRQFDAVYFHP 97
Query: 72 SSYKLSLLSAGSTIEL 87
S++ + L+AG+ ++L
Sbjct: 98 STFHCARLAAGAALQL 113
Score = 74 (31.1 bits), Expect = 5.1e-65, Sum P(4) = 5.1e-65
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 251 VAEGGYCLKSLAEGAALTLRALLDDPCP 278
V EGGY L+SL++ + ++ALL DP P
Sbjct: 300 VLEGGYHLESLSQSVCMMVQALLGDPAP 327
Score = 68 (29.0 bits), Expect = 5.1e-65, Sum P(4) = 5.1e-65
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP 398
+++ ++LP+AY F P+LVLV G + DP
Sbjct: 559 FLSCVLALVLPLAYSFQPDLVLVVLGPAHGLQDP 592
Score = 39 (18.8 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 112 IELVDNICRGEIKNGMAVIRPP 133
+ L+D I G++ +G+A P
Sbjct: 468 LHLLDRILDGQVSSGIAATPGP 489
Score = 38 (18.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 514 YEHRPYWNCYKFQDISTEG 532
YEH +W + D T G
Sbjct: 197 YEHGRFWPYLRESDADTVG 215
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 440 (159.9 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 76/142 (53%), Positives = 104/142 (73%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G ++NG+A++RPPGHH+ ++ G+C FN+VA+AA+HA + R+LIVD
Sbjct: 113 LQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVD 172
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WD+HHGQ TQ +F +D V+YFS HRYEHG FWP LRES+ D +G G G G+ N+P N+
Sbjct: 173 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 232
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M +ADYMA F QVLLP+ E
Sbjct: 233 VGMGNADYMAAFLQVLLPLAFE 254
Score = 279 (103.3 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 53/113 (46%), Positives = 79/113 (69%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF QV+LP+A++FN ELVLVSAG+D+ + D G + +PE +AH T L+
Sbjct: 234 GMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQV 293
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA GR+ LEGGY++ S+S ++ + +ALLGDP P L + + SA+ SI+
Sbjct: 294 LAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDPAPPLSGPMVPHGSALQSIQ 346
Score = 133 (51.9 bits), Expect = 1.3e-80, Sum P(3) = 1.3e-80
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
++ GL QRC + REA++ E+ H+ E + LL T+ + + L+ LS +DA+Y HP
Sbjct: 41 RQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQ-ALSTEELQALSRQFDAVYFHP 99
Query: 72 SSYKLSLLSAGSTIEL 87
S++ + L+AG+ ++L
Sbjct: 100 STFHCARLAAGAALQL 115
Score = 74 (31.1 bits), Expect = 5.1e-65, Sum P(4) = 5.1e-65
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 251 VAEGGYCLKSLAEGAALTLRALLDDPCP 278
V EGGY L+SL++ + ++ALL DP P
Sbjct: 302 VLEGGYHLESLSQSVCMMVQALLGDPAP 329
Score = 68 (29.0 bits), Expect = 5.1e-65, Sum P(4) = 5.1e-65
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP 398
+++ ++LP+AY F P+LVLV G + DP
Sbjct: 559 FLSCVLALVLPLAYSFQPDLVLVVLGPAHGLQDP 592
Score = 39 (18.8 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 112 IELVDNICRGEIKNGMAVIRPP 133
+ L+D I G++ +G+A P
Sbjct: 470 LHLLDRILDGQVSSGIAATPGP 491
Score = 38 (18.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 514 YEHRPYWNCYKFQDISTEG 532
YEH +W + D T G
Sbjct: 199 YEHGRFWPYLRESDADTVG 217
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 430 (156.4 bits), Expect = 8.8e-80, Sum P(3) = 8.8e-80
Identities = 75/142 (52%), Positives = 102/142 (71%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G ++NG+A++RPPGHH+ ++ G+C FNNVA+AA+HA + R+LIVD
Sbjct: 111 LQLVDAVLTGAVRNGLALVRPPGHHSQRATANGFCVFNNVAIAAKHAQQKHGLRRILIVD 170
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ Q +F +D V+YFS HRYEHG FWP LRES+ D +G G G G+ N+P N+
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQ 230
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M +ADY+A F VLLP+ E
Sbjct: 231 VGMGNADYVAAFLHVLLPLAFE 252
Score = 286 (105.7 bits), Expect = 8.8e-80, Sum P(3) = 8.8e-80
Identities = 52/113 (46%), Positives = 80/113 (70%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G +PE +AH TH L+
Sbjct: 232 GMGNADYVAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECFAHLTHLLQV 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA GR+ LEGGY++ S+S ++ + +ALLGDP L ++ + SA+ S++
Sbjct: 292 LAGGRVCAVLEGGYHLESLSQSVCMMVRALLGDPALPLSGPMEPHGSALESLQ 344
Score = 129 (50.5 bits), Expect = 8.8e-80, Sum P(3) = 8.8e-80
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
GL QRC + REA++ E+ H+ E + LL T+ + L+ LS YDA+Y+HPS++
Sbjct: 42 GLKQRCLQLVAREASEAELGLVHSPEYVALLQGTQ-ALGTRELQALSKEYDAVYLHPSTF 100
Query: 75 KLSLLSAGSTIEL 87
+ L+ G+ ++L
Sbjct: 101 HCARLAVGAALQL 113
Score = 72 (30.4 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 251 VAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSERPKIWKEGKQCL 300
V EGGY L+SL++ + +RALL DP L P E E QC+
Sbjct: 300 VLEGGYHLESLSQSVCMMVRALLGDPAL---PLSGPMEPHGSALESLQCV 346
Score = 71 (30.1 bits), Expect = 1.6e-63, Sum P(4) = 1.6e-63
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 424
+++ ++LP+AY F P+LVLV+ G P G + P+A A L+ A GR+
Sbjct: 558 FLSCALALVLPLAYSFQPDLVLVALG-------PAHGLR-DPQA-ALLAALLRGPAGGRV 608
Query: 425 ILALEGGYNISSISYAMTLCTKALLGDPLPLL 456
++ S T+ + L G+ P L
Sbjct: 609 FALVDE----ESTPQLATVLARVLNGEAPPSL 636
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 514 YEHRPYWNCYKFQDISTEG 532
YEH +W C + D G
Sbjct: 197 YEHGHFWPCLRESDADAVG 215
Score = 41 (19.5 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 114 LVDNICRGEIKNGMAVIRPP 133
L+D I G++ +GMA P
Sbjct: 469 LLDRILDGQVSSGMAATPVP 488
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 432 (157.1 bits), Expect = 1.2e-78, Sum P(3) = 1.2e-78
Identities = 75/142 (52%), Positives = 103/142 (72%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G + NG+A++RPPGHH+ ++ G+C FNNVALAA+HA + R+LIVD
Sbjct: 111 LQLVDAVLTGAVHNGLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVD 170
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ Q +F +D V+YFS HRYEHG+FWP L ES+ D +G+G G+G+ N+P N+
Sbjct: 171 WDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQ 230
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M +ADY+A F VLLP+ E
Sbjct: 231 VGMGNADYLAAFLHVLLPLAFE 252
Score = 270 (100.1 bits), Expect = 1.2e-78, Sum P(3) = 1.2e-78
Identities = 52/113 (46%), Positives = 78/113 (69%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+
Sbjct: 232 GMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQV 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA GRI LEGGY++ S++ ++ + + LLGDP P L + SA+ SI+
Sbjct: 292 LAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQ 344
Score = 131 (51.2 bits), Expect = 1.2e-78, Sum P(3) = 1.2e-78
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 9 DPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIY 68
D ++ GL +RC + EA++EE+ H+ E I L+ T+ + D + L LS Y+A+Y
Sbjct: 36 DGLRQRGLEERCLCLSACEASEEELGLVHSPEYIALVQKTQ-TLDKEELHALSKQYNAVY 94
Query: 69 IHPSSYKLSLLSAGSTIEL 87
HP ++ + L+AG+ ++L
Sbjct: 95 FHPDTFHCARLAAGAALQL 113
Score = 74 (31.1 bits), Expect = 3.8e-63, Sum P(4) = 3.8e-63
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 251 VAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSE 288
V EGGY L+SLA+ + ++ LL DP P L P +
Sbjct: 300 VLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQ 337
Score = 60 (26.2 bits), Expect = 3.8e-63, Sum P(4) = 3.8e-63
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 424
+++ ++LP+AY F P++VL++ G P G + + +A A L++ GRI
Sbjct: 553 FLSLILGLVLPLAYGFQPDMVLMALG-------PAHGLQ-NAQA-ALLAAMLRSPVGGRI 603
Query: 425 ILALEGGYNISSISYAMTLCTKALLGDPLPLL 456
+ +E SI +AL G+ P L
Sbjct: 604 LAVVEE----ESIRLLARSLAQALHGETPPSL 631
Score = 37 (18.1 bits), Expect = 3.2e-54, Sum P(3) = 3.2e-54
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 549 GNPKQEIYATRDCYPIQSQEFVRLCDERLDSLI 581
G+P+ ++ AT +C+ +Q L R+ +++
Sbjct: 269 GDPEGQMQATPECFAHLTQLLQVLAGGRICAVL 301
Score = 37 (18.1 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 114 LVDNICRGEIKNGMA 128
L+D I G+I+N +A
Sbjct: 464 LLDGIMDGQIRNAIA 478
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 424 (154.3 bits), Expect = 1.6e-78, Sum P(3) = 1.6e-78
Identities = 73/142 (51%), Positives = 100/142 (70%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G ++NG+A++RPPGHH ++ G+C FNNVA+AA HA + R+L+VD
Sbjct: 111 LQLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVD 170
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ Q +F +D V+YFS HRYEHG FWP LRES+ D +G G G G+ N+P N+
Sbjct: 171 WDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQ 230
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M +ADY+A F +LLP+ E
Sbjct: 231 VGMGNADYVAAFLHLLLPLAFE 252
Score = 273 (101.2 bits), Expect = 1.6e-78, Sum P(3) = 1.6e-78
Identities = 50/113 (44%), Positives = 78/113 (69%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF ++LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+
Sbjct: 232 GMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQV 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA GR+ LEGGY++ S++ ++ + + LLGDP P L + SA+ SI+
Sbjct: 292 LAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQ 344
Score = 137 (53.3 bits), Expect = 1.6e-78, Sum P(3) = 1.6e-78
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 9 DPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIY 68
D ++ GL QRC + REA++EE+ H+ E + L+ T+ + L+ LS +DAIY
Sbjct: 36 DRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQ-VLGKEELQALSGQFDAIY 94
Query: 69 IHPSSYKLSLLSAGSTIEL 87
HPS++ + L+AG+ ++L
Sbjct: 95 FHPSTFHCARLAAGAGLQL 113
Score = 82 (33.9 bits), Expect = 2.9e-65, Sum P(4) = 2.9e-65
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 251 VAEGGYCLKSLAEGAALTLRALLDDPCP 278
V EGGY L+SLAE +T++ LL DP P
Sbjct: 300 VLEGGYHLESLAESVCMTVQTLLGDPAP 327
Score = 77 (32.2 bits), Expect = 2.9e-65, Sum P(4) = 2.9e-65
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 424
+++ ++LP+AY F P+LVLV+ G P G + P A A L+ LA GR+
Sbjct: 555 FLSCILGLVLPLAYGFQPDLVLVALG-------PGHGLQ-GPHA-ALLAAMLRGLAGGRV 605
Query: 425 ILALE 429
+ LE
Sbjct: 606 LALLE 610
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 451 (163.8 bits), Expect = 6.2e-75, Sum P(3) = 6.2e-75
Identities = 92/220 (41%), Positives = 130/220 (59%)
Query: 40 EQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAGSTI---ELRR---NQKR 93
EQ++ E V A E S + + +H S + L + T+ EL+R N
Sbjct: 38 EQLQCYHLVERCVPVPARE--GSEEEILLVHSSEH-LEAAKSTQTMNEEELKRISGNYDS 94
Query: 94 NGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVAL 153
++LVD++ G++ NGMA++RPPGHH+ ++ G+C FNNVA+
Sbjct: 95 FFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAI 154
Query: 154 AAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYD 213
AA++A + R+LIVDWDVHHGQ TQ +F D V+YFS HRYEH FWP+L+ES+YD
Sbjct: 155 AAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYD 214
Query: 214 HIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAE 253
+G G GKG+N N+P NK M ++DY+A F VLLP+ E
Sbjct: 215 AVGLGKGKGFNINLPWNKVGMGNSDYLAAFFHVLLPVAFE 254
Score = 283 (104.7 bits), Expect = 6.2e-75, Sum P(3) = 6.2e-75
Identities = 52/113 (46%), Positives = 80/113 (70%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF V+LP+A++F+PELVLVS+GYD+ + DP G +PE +AH TH+L
Sbjct: 234 GMGNSDYLAAFFHVLLPVAFEFDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQ 293
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA G++ + LEGGY++ S+S ++ + K LL DPLP + ++ SA+ SI+
Sbjct: 294 LAHGKLCVILEGGYHLKSLSESVCMTVKTLLRDPLPQVTGEMAPCLSAIESIQ 346
Score = 132 (51.5 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 24/72 (33%), Positives = 47/72 (65%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYK 75
LV+RC + RE ++EEIL H+ E +E +T+ + + L+++S +YD+ + HP++Y
Sbjct: 45 LVERCVPVPAREGSEEEILLVHSSEHLEAAKSTQTMNE-EELKRISGNYDSFFFHPNTYH 103
Query: 76 LSLLSAGSTIEL 87
+ L+ G+ ++L
Sbjct: 104 CARLAVGAALQL 115
Score = 85 (35.0 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 207 LRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAA 266
L S YD G G +G P H+ M + H L ++ EGGY LKSL+E
Sbjct: 261 LVSSGYDS-GIGDPEGQMNATPEVFAHLTHF-LMQLAHGKLC-VILEGGYHLKSLSESVC 317
Query: 267 LTLRALLDDPCP 278
+T++ LL DP P
Sbjct: 318 MTVKTLLRDPLP 329
Score = 63 (27.2 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 364 EYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR 423
++ +A ILP+AY + P L++++ G N LG +S L+ LA+ R
Sbjct: 559 DFFSAVLGFILPVAYSYQPNLIVIAVG----PNRSLGISGISL-----LFGLLQGLAESR 609
Query: 424 IILALE 429
I+ +E
Sbjct: 610 ILAVIE 615
Score = 53 (23.7 bits), Expect = 6.2e-75, Sum P(3) = 6.2e-75
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 507 ETILNCIYEHRPYWNCYKFQDISTEGAHSSPLHIPRAEFKYEGNPKQEI 555
E+I N H+PYW ++D S S+ +P+ + N +I
Sbjct: 343 ESIQNVRAAHKPYWKWLTYEDTSFLHNLSTRSDLPKTADITDSNETDKI 391
Score = 44 (20.5 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPGHH---AMKSEYC-GYCFFNNVALAAQHALDNTSVSR 166
T+ ++D I + E+ NG+A A++ C G + + H + NT +
Sbjct: 465 TLTILDKILKKEVCNGIAESPAASASVAVALRHPLCFGLQRVLCIFVGDMHIIPNTEDGK 524
Query: 167 VLIV 170
+L++
Sbjct: 525 ILVI 528
Score = 42 (19.8 bits), Expect = 3.6e-23, Sum P(3) = 3.6e-23
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 28 ATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
A+ E++ H +E+ + EGS + L S H +A
Sbjct: 35 ASYEQLQCYHLVERCVPVPAREGSEEEILLVHSSEHLEA 73
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 514 YEHRPYWNCYKFQDISTEG 532
YEH+ +W K D G
Sbjct: 199 YEHQEFWPSLKESDYDAVG 217
Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 213 DHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
+ G+ K Y I LN +KDAD F VL
Sbjct: 534 EQTGKSSSKHY---IVLNWKELKDADGNDFFSAVL 565
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 419 (152.6 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 72/133 (54%), Positives = 97/133 (72%)
Query: 121 GEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQAT 180
G + NG+A++RPPGHH+ ++ G+C FNNVA+AA+HA + R+LIVDWDVHHGQ
Sbjct: 2 GAVHNGLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGI 61
Query: 181 QQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYM 240
Q +F +D V+YFS HRYEHG FWP LRES+ D +G+G G+G+ N+P N+ M +ADY+
Sbjct: 62 QYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYL 121
Query: 241 AVFHQVLLPMVAE 253
A F VLLP+ E
Sbjct: 122 AAFLHVLLPVAFE 134
Score = 290 (107.1 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 52/113 (46%), Positives = 81/113 (71%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE + H T L+
Sbjct: 114 GMGNADYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQV 173
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA GR+ LEGGY++ S+S ++ + +ALLGDP+P L ++ + SA+ SI+
Sbjct: 174 LAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPMEPHRSALESIQ 226
Score = 78 (32.5 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 251 VAEGGYCLKSLAEGAALTLRALLDDPCP 278
V EGGY L+SL++ + +RALL DP P
Sbjct: 182 VLEGGYHLESLSQSVCMVVRALLGDPVP 209
Score = 66 (28.3 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 424
+++ ++LP+AY F P+LVL+ G P G + P A A L+ A GR+
Sbjct: 438 FLSCVLALVLPLAYGFRPDLVLMVLG-------PAQGLQ-EPHA-ALLAALLRGPAGGRV 488
Query: 425 ILALEGGYNISSISYAMTLCTKALLGDPLPLL 456
++ +E S + + L GD P L
Sbjct: 489 LVLVEQ----EPTSQLAGILARVLHGDAPPSL 516
Score = 37 (18.1 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLG 450
A GR L L GG + + +LLG
Sbjct: 255 ADGRTSLVLPGGPTFKAAEAQASAVLSSLLG 285
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 498 (180.4 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 87/167 (52%), Positives = 118/167 (70%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G ++NG+A++RPPGHH ++ G+C FNNVA+AA HA + R+L+VD
Sbjct: 111 LQLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVD 170
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ Q +F +D V+YFS HRYEHG FWP LRES+ D +G G G G+ N+P N+
Sbjct: 171 WDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQ 230
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCP 278
M +ADY+A F +LLP+ EGGY L+SLAE +T++ LL DP P
Sbjct: 231 VGMGNADYVAAFLHLLLPLAFEGGYHLESLAESVCMTVQTLLGDPAP 277
Score = 137 (53.3 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 9 DPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIY 68
D ++ GL QRC + REA++EE+ H+ E + L+ T+ + L+ LS +DAIY
Sbjct: 36 DRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQ-VLGKEELQALSGQFDAIY 94
Query: 69 IHPSSYKLSLLSAGSTIEL 87
HPS++ + L+AG+ ++L
Sbjct: 95 FHPSTFHCARLAAGAGLQL 113
Score = 87 (35.7 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 426 LALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LA EGGY++ S++ ++ + + LLGDP P L + SA+ SI+
Sbjct: 249 LAFEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQ 294
Score = 77 (32.2 bits), Expect = 4.5e-67, Sum P(3) = 4.5e-67
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRI 424
+++ ++LP+AY F P+LVLV+ G P G + P A A L+ LA GR+
Sbjct: 505 FLSCILGLVLPLAYGFQPDLVLVALG-------PGHGLQ-GPHA-ALLAAMLRGLAGGRV 555
Query: 425 ILALE 429
+ LE
Sbjct: 556 LALLE 560
Score = 60 (26.2 bits), Expect = 8.0e-12, Sum P(3) = 8.0e-12
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 359 GMSDPEYIAAFQQVILPIAYQ 379
GM + +Y+AAF ++LP+A++
Sbjct: 232 GMGNADYVAAFLHLLLPLAFE 252
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 436 (158.5 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 83/164 (50%), Positives = 108/164 (65%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + I E NG AV+RPPGHHA CG+C FNNVA AA+ A + R+LIVD
Sbjct: 123 DLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDL 181
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ++FY+D RV+YFSIHR+EHG FWP+L ES++DHIG G G GYN N+ LN+T
Sbjct: 182 DVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNET 241
Query: 233 HMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDP 276
D+DY+++ VLLP+ + ++ G ALL DP
Sbjct: 242 GCTDSDYLSIIFHVLLPLATQFDPHFVIISAG----FDALLGDP 281
Score = 365 (133.5 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 69/177 (38%), Positives = 106/177 (59%)
Query: 112 IELVDNICRGEI--KNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLI 169
++ VD I + +N + ++RPPGHHA S+ G+C FNNVA+AA++A RVLI
Sbjct: 535 LQSVDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLI 594
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
+DWDVHHG TQ++FY D+ V+Y SIHR++ G F+P +Y +GEG G+G + N+P
Sbjct: 595 LDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPF 654
Query: 230 NKTHMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
+ M D +Y F +V++P+ + L ++ G A +DDP ++ TP
Sbjct: 655 SGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAG----FDAAVDDPLGEYKV--TP 705
Score = 269 (99.8 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 54/86 (62%), Positives = 67/86 (77%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M D EY AFQ+VI+PIAYQFNP+LVL+SAG+DA V+DPLG KV+PE +A T+ L +L
Sbjct: 659 MGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSL 718
Query: 420 AQGRIILALEGGYNISSISY-AMTLC 444
A GRII LEGGYN++SIS A +C
Sbjct: 719 AGGRIITVLEGGYNLTSISNSAQAVC 744
Score = 238 (88.8 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 42/92 (45%), Positives = 65/92 (70%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G +D +Y++ V+LP+A QF+P V++SAG+DA + DPLGG ++P+ Y+H + LK+
Sbjct: 242 GCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKS 301
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLG 450
LAQGR+++ LEGGYN + A+ C + LLG
Sbjct: 302 LAQGRMLVVLEGGYNHQISAVAVQRCVRVLLG 333
Score = 98 (39.6 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 12 KELGLVQRCKFIQ-PREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIH 70
+E G++++C R AT EEI HT + +E L TTE D + +E+ +++IY+
Sbjct: 461 RESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLT 520
Query: 71 PSSYKLSLLSAGSTIE 86
+ K++ + G+ ++
Sbjct: 521 RDTLKVARKAVGAVLQ 536
Score = 39 (18.8 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 493 PFAF-LSFLSLKNITETILNCIYEHRPYWNCYKF 525
PF+ L+ ++ ++ ++ + R +WNC+ +
Sbjct: 336 PFSIELNEAPKESTVDSCVSLVSVLRHHWNCFDY 369
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 436 (158.5 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 83/164 (50%), Positives = 108/164 (65%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + I E NG AV+RPPGHHA CG+C FNNVA AA+ A + R+LIVD
Sbjct: 125 DLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDL 183
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ++FY+D RV+YFSIHR+EHG FWP+L ES++DHIG G G GYN N+ LN+T
Sbjct: 184 DVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNET 243
Query: 233 HMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDP 276
D+DY+++ VLLP+ + ++ G ALL DP
Sbjct: 244 GCTDSDYLSIIFHVLLPLATQFDPHFVIISAG----FDALLGDP 283
Score = 365 (133.5 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 69/177 (38%), Positives = 106/177 (59%)
Query: 112 IELVDNICRGEI--KNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLI 169
++ VD I + +N + ++RPPGHHA S+ G+C FNNVA+AA++A RVLI
Sbjct: 537 LQSVDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLI 596
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
+DWDVHHG TQ++FY D+ V+Y SIHR++ G F+P +Y +GEG G+G + N+P
Sbjct: 597 LDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPF 656
Query: 230 NKTHMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
+ M D +Y F +V++P+ + L ++ G A +DDP ++ TP
Sbjct: 657 SGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAG----FDAAVDDPLGEYKV--TP 707
Score = 269 (99.8 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 54/86 (62%), Positives = 67/86 (77%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M D EY AFQ+VI+PIAYQFNP+LVL+SAG+DA V+DPLG KV+PE +A T+ L +L
Sbjct: 661 MGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSL 720
Query: 420 AQGRIILALEGGYNISSISY-AMTLC 444
A GRII LEGGYN++SIS A +C
Sbjct: 721 AGGRIITVLEGGYNLTSISNSAQAVC 746
Score = 238 (88.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 42/92 (45%), Positives = 65/92 (70%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G +D +Y++ V+LP+A QF+P V++SAG+DA + DPLGG ++P+ Y+H + LK+
Sbjct: 244 GCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKS 303
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLG 450
LAQGR+++ LEGGYN + A+ C + LLG
Sbjct: 304 LAQGRMLVVLEGGYNHQISAVAVQRCVRVLLG 335
Score = 98 (39.6 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 12 KELGLVQRCKFIQ-PREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIH 70
+E G++++C R AT EEI HT + +E L TTE D + +E+ +++IY+
Sbjct: 463 RESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLT 522
Query: 71 PSSYKLSLLSAGSTIE 86
+ K++ + G+ ++
Sbjct: 523 RDTLKVARKAVGAVLQ 538
Score = 39 (18.8 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 493 PFAF-LSFLSLKNITETILNCIYEHRPYWNCYKF 525
PF+ L+ ++ ++ ++ + R +WNC+ +
Sbjct: 338 PFSIELNEAPKESTVDSCVSLVSVLRHHWNCFDY 371
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 436 (158.5 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 83/164 (50%), Positives = 108/164 (65%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + I E NG AV+RPPGHHA CG+C FNNVA AA+ A + R+LIVD
Sbjct: 125 DLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQAAEEAFFS-GAERILIVDL 183
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ++FY+D RV+YFSIHR+EHG FWP+L ES++DHIG G G GYN N+ LN+T
Sbjct: 184 DVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNET 243
Query: 233 HMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDP 276
D+DY+++ VLLP+ + ++ G ALL DP
Sbjct: 244 GCTDSDYLSIIFHVLLPLATQFDPHFVIISAG----FDALLGDP 283
Score = 365 (133.5 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 69/177 (38%), Positives = 106/177 (59%)
Query: 112 IELVDNICRGEI--KNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLI 169
++ VD I + +N + ++RPPGHHA S+ G+C FNNVA+AA++A RVLI
Sbjct: 537 LQSVDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLI 596
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
+DWDVHHG TQ++FY D+ V+Y SIHR++ G F+P +Y +GEG G+G + N+P
Sbjct: 597 LDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPF 656
Query: 230 NKTHMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTP 286
+ M D +Y F +V++P+ + L ++ G A +DDP ++ TP
Sbjct: 657 SGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAG----FDAAVDDPLGEYKV--TP 707
Score = 269 (99.8 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
Identities = 54/86 (62%), Positives = 67/86 (77%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
M D EY AFQ+VI+PIAYQFNP+LVL+SAG+DA V+DPLG KV+PE +A T+ L +L
Sbjct: 661 MGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSL 720
Query: 420 AQGRIILALEGGYNISSISY-AMTLC 444
A GRII LEGGYN++SIS A +C
Sbjct: 721 AGGRIITVLEGGYNLTSISNSAQAVC 746
Score = 238 (88.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 42/92 (45%), Positives = 65/92 (70%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G +D +Y++ V+LP+A QF+P V++SAG+DA + DPLGG ++P+ Y+H + LK+
Sbjct: 244 GCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKS 303
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLG 450
LAQGR+++ LEGGYN + A+ C + LLG
Sbjct: 304 LAQGRMLVVLEGGYNHQISAVAVQRCVRVLLG 335
Score = 98 (39.6 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 12 KELGLVQRCKFIQ-PREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIH 70
+E G++++C R AT EEI HT + +E L TTE D + +E+ +++IY+
Sbjct: 463 RESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLT 522
Query: 71 PSSYKLSLLSAGSTIE 86
+ K++ + G+ ++
Sbjct: 523 RDTLKVARKAVGAVLQ 538
Score = 39 (18.8 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 493 PFAF-LSFLSLKNITETILNCIYEHRPYWNCYKF 525
PF+ L+ ++ ++ ++ + R +WNC+ +
Sbjct: 338 PFSIELNEAPKESTVDSCVSLVSVLRHHWNCFDY 371
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 371 (135.7 bits), Expect = 4.0e-61, Sum P(4) = 4.0e-61
Identities = 67/144 (46%), Positives = 96/144 (66%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDN--TSVSRVLI 169
IE + G +KN +AV+RPPGHHA G+C F+NVA+AA++ L N SV R++I
Sbjct: 182 IEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
+DWD+HHG TQ+ FY D++V+Y S+HR+E G ++P + +YD GEG G+G+N NI
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 230 NKTHMKDADYMAVFHQVLLPMVAE 253
+ DA+YM F QV++PM E
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGRE 325
Score = 252 (93.8 bits), Expect = 4.0e-61, Sum P(4) = 4.0e-61
Identities = 42/94 (44%), Positives = 66/94 (70%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D EY+ AF+QV++P+ +F P+LV++S+G+DA D +G C V+P Y H TH LK+
Sbjct: 305 GVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHMLKS 364
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDP 452
LA+G + + LEGGYN+ +I+ + K L+G+P
Sbjct: 365 LARGNLCVVLEGGYNLDAIARSALSVAKVLIGEP 398
Score = 96 (38.9 bits), Expect = 4.0e-61, Sum P(4) = 4.0e-61
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 23 IQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAG 82
I R AT EEIL+ HT E +E + +TE + + L++ D++Y + SY + L G
Sbjct: 121 IPVRAATSEEILEVHTKEHLEFIESTEKMSREELLKETEKG-DSVYFNNDSYASARLPCG 179
Query: 83 STIE 86
IE
Sbjct: 180 GAIE 183
Score = 56 (24.8 bits), Expect = 8.4e-41, Sum P(4) = 8.4e-41
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 248 LPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSERPK 291
L +V EGGY L ++A A + L+ +P P + L P PK
Sbjct: 370 LCVVLEGGYNLDAIARSALSVAKVLIGEP-P--DELPDPLSDPK 410
Score = 41 (19.5 bits), Expect = 4.0e-61, Sum P(4) = 4.0e-61
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 505 ITETILNCIYEHRPYWNCYKFQDISTEGAHSSPLH 539
+ E I I YWNC++ + ++ + P++
Sbjct: 413 VIEMIDKVIRLQSKYWNCFRRRHANSGCNFNEPIN 447
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 392 (143.0 bits), Expect = 5.5e-60, Sum P(3) = 5.5e-60
Identities = 64/145 (44%), Positives = 103/145 (71%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALD---NTSVSRVL 168
+++ + + GE+ G A++RPPGHHA E G+C FNNVA+AA L+ + V ++L
Sbjct: 167 VKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKIL 226
Query: 169 IVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIP 228
IVDWD+HHG TQ+MF+ D+RV+ FS+HR++HG+F+P + +++ +GEG G+G+N N+P
Sbjct: 227 IVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVP 286
Query: 229 LNKTHMKDADYMAVFHQVLLPMVAE 253
+ DADY+AV++ +L+P+ E
Sbjct: 287 WEQGGCGDADYLAVWNHILIPVTKE 311
Score = 232 (86.7 bits), Expect = 5.5e-60, Sum P(3) = 5.5e-60
Identities = 39/93 (41%), Positives = 61/93 (65%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D +Y+A + +++P+ +F P+++L+SAG+DA + DPLGGC V+P Y+ L
Sbjct: 291 GCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLME 350
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGD 451
A G+I+LALEGGYN+ S+ + C + LL D
Sbjct: 351 FAHGKIVLALEGGYNLESLGKSSLACVQVLLED 383
Score = 81 (33.6 bits), Expect = 5.5e-60, Sum P(3) = 5.5e-60
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
G+ QRC + +A + + HT + + L+ + +++S D+IY++ S
Sbjct: 97 GVTQRCVVLGGSKAEDKHLKLVHTKKHVNLVKSISTKKKDSRRNKIASQLDSIYLNGGSS 156
Query: 75 KLSLLSAGSTIEL 87
+ + L+AGS +++
Sbjct: 157 EAAYLAAGSVVKV 169
Score = 52 (23.4 bits), Expect = 3.4e-41, Sum P(3) = 3.4e-41
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDD 275
+ EGGY L+SL + + ++ LL+D
Sbjct: 358 LALEGGYNLESLGKSSLACVQVLLED 383
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 380 (138.8 bits), Expect = 7.4e-58, Sum P(2) = 7.4e-58
Identities = 90/246 (36%), Positives = 131/246 (53%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ IQ R+A+ EEI H+ E LL G++ +D ++L +
Sbjct: 97 QETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLY---GTSPLDG-QKLDPR---TLLGD 148
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K S L G L + IEL + GE+KNG AV+
Sbjct: 149 DSRKFFSSLPCGG---LGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVV 205
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A++ D ++S++LIVD DVHHG TQQ FY D +
Sbjct: 206 RPPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSI 265
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P + +G G+G+GYN NI M D +Y+ F V+
Sbjct: 266 LYISLHRYDEGNFFPG--SGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVV 323
Query: 248 LPMVAE 253
+P+ E
Sbjct: 324 MPVARE 329
Score = 235 (87.8 bits), Expect = 7.4e-58, Sum P(2) = 7.4e-58
Identities = 51/119 (42%), Positives = 77/119 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVND--PLGGCKVSPEA--YAHFTHW 415
M D EY+ AF+ V++P+A +F+P++VLVSAG+DA PLGG KV+ + + H T
Sbjct: 310 MGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCNGFGHLTKQ 369
Query: 416 LKALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL---DINSSAVTSIK 471
L LA GR+ LALEGG+++++I A C ALLG+ LE D+ +N++A S++
Sbjct: 370 LMTLANGRVALALEGGHDLTAICDASEACINALLGNEPGSLEEDVLHQSVNTNAAASLQ 428
Score = 38 (18.4 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALL-DDP 276
+ EGG+ L ++ + + + ALL ++P
Sbjct: 380 LALEGGHDLTAICDASEACINALLGNEP 407
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 424 (154.3 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 74/142 (52%), Positives = 100/142 (70%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + G + NG+A++RPPGHH+ ++ G+C FNNVA+AA+HA + R+LIVD
Sbjct: 111 LRLVDAVLTGAVHNGVALVRPPGHHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVD 170
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ Q +F +D V+YFS HRYEHG FWP L ES+ D +G G G+G+ N+P N+
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQ 230
Query: 232 THMKDADYMAVFHQVLLPMVAE 253
M +ADY+A F VLLP+ E
Sbjct: 231 VGMGNADYLAAFLHVLLPLAFE 252
Score = 202 (76.2 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM + +Y+AAF V+LP+A++F+PELVLVSAG+D+ + DP G + +PE +AH T L+
Sbjct: 232 GMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQV 291
Query: 419 LAQGRIILALE 429
LA GRI LE
Sbjct: 292 LAGGRICAVLE 302
Score = 136 (52.9 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 9 DPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIY 68
D ++ GL +RC+ + EA++EE+ H+ E I L+ T+ + D + L LS YDA+Y
Sbjct: 36 DGLRQRGLEERCQCLSVCEASEEELGLVHSPEYIALVQKTQ-TLDKEELHTLSKQYDAVY 94
Query: 69 IHPSSYKLSLLSAGSTIEL 87
HP ++ + L+AG+ + L
Sbjct: 95 FHPDTFHCARLAAGAALRL 113
Score = 61 (26.5 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 372 VILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIILALEGG 431
++LP+AY F P++VL++ G P G + + +A A L++ GRI+ +E
Sbjct: 482 LVLPLAYGFQPDMVLMALG-------PAHGLQ-NAQA-ALLAAMLRSPVGGRILALVE-- 530
Query: 432 YNISSISYAMTLCTKALLGDPLPLL 456
S + A TL + L G+ P L
Sbjct: 531 -EESILQLARTLA-QVLHGETPPSL 553
Score = 38 (18.4 bits), Expect = 3.8e-55, Sum P(3) = 3.8e-55
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 549 GNPKQEIYATRDCYPIQSQEFVRLCDERLDSLIASKSV 586
G+P+ ++ AT +C+ +Q L R+ +++ V
Sbjct: 269 GDPEGQMQATPECFAHLTQLLQVLAGGRICAVLECPGV 306
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 344 (126.2 bits), Expect = 7.7e-56, Sum P(3) = 7.7e-56
Identities = 64/144 (44%), Positives = 88/144 (61%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDN--TSVSRVLI 169
IE + G++KN AV+RPPGHHA + G+C FNNV++ A+ L + RVLI
Sbjct: 171 IETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLI 230
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
VDWD+HHG TQ FY+D V+Y S+HRYE+G F+P ++ GEG G G NIP
Sbjct: 231 VDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPW 290
Query: 230 NKTHMKDADYMAVFHQVLLPMVAE 253
+ M D DY+ F +V++P+ E
Sbjct: 291 SCAGMGDGDYIYAFQRVVMPVAYE 314
Score = 256 (95.2 bits), Expect = 7.7e-56, Sum P(3) = 7.7e-56
Identities = 46/94 (48%), Positives = 67/94 (71%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D +YI AFQ+V++P+AY+F+P+LV+VS G+DA D +G ++P AYAH T L
Sbjct: 294 GMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMG 353
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDP 452
LA G++ ++LEGGYN+ SIS + ++LLG P
Sbjct: 354 LADGKVFISLEGGYNLDSISTSALAVAQSLLGIP 387
Score = 84 (34.6 bits), Expect = 7.7e-56, Sum P(3) = 7.7e-56
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 23 IQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAG 82
I REAT EE+L+ H+ E + + TE + D L L D++Y + S + L+ G
Sbjct: 110 IPAREATLEELLQVHSQEMYDRVTNTEKMSHED-LANLEKISDSLYYNNESAFCARLACG 168
Query: 83 STIE 86
S IE
Sbjct: 169 SAIE 172
Score = 44 (20.5 bits), Expect = 9.6e-34, Sum P(3) = 9.6e-34
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 253 EGGYCLKSLAEGAALTLRALLDDP 276
EGGY L S++ A ++LL P
Sbjct: 364 EGGYNLDSISTSALAVAQSLLGIP 387
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 437 (158.9 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 85/159 (53%), Positives = 105/159 (66%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + EI+NGMA+IRPPGHHA S GYC FN+VA+AA++A + RVLIVD
Sbjct: 137 LRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 196
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WDVHHGQ TQ F D V+YFSIHRYE G FWP+L+ S + G G G+GY N+P N+
Sbjct: 197 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 256
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLR 270
M+DADY+A F VLLP+ E L G AL +R
Sbjct: 257 VGMRDADYIAAFLHVLLPVALEVLGIWGVLGGGVALKVR 295
Score = 151 (58.2 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 7 IKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
IK+ + GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD+
Sbjct: 60 IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRVLADTYDS 118
Query: 67 IYIHPSSYKLSLLSAGSTIEL 87
+Y+HP+SY + L++GS + L
Sbjct: 119 VYLHPNSYSCACLASGSVLRL 139
Score = 65 (27.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 359 GMSDPEYIAAFQQVILPIAYQ 379
GM D +YIAAF V+LP+A +
Sbjct: 258 GMRDADYIAAFLHVLLPVALE 278
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 385 (140.6 bits), Expect = 1.3e-54, Sum P(2) = 1.3e-54
Identities = 89/246 (36%), Positives = 133/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTE-GSTDVDALEQLSSHYDAIYIH 70
+E GL +C+ I+ R+AT EE+ H+ L T +D+ + L S ++++
Sbjct: 274 QETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGS-LASVFV- 331
Query: 71 PSSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
+L G + N+ + +ELV + GE+KNG AV+
Sbjct: 332 ----RLPCGGVGVDSDTIWNEVHSAGAARLAVGC------VVELVFKVATGELKNGFAVV 381
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+C+FN+VA+AA+ SVS++LIVDWDVHHG TQQ FY+D V
Sbjct: 382 RPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSV 441
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P D +G G G G+N N+ M DA+Y+A F V+
Sbjct: 442 LYMSLHRYDDGNFFPG--SGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVV 499
Query: 248 LPMVAE 253
+P+ +E
Sbjct: 500 MPIASE 505
Score = 239 (89.2 bits), Expect = 1.3e-54, Sum P(2) = 1.3e-54
Identities = 56/134 (41%), Positives = 79/134 (58%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + T L
Sbjct: 486 MGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLM 545
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSSAVTSIKVXXXX 476
LA GRI+LALEGG+++++I A C ALLG+ L PL E L +A +++
Sbjct: 546 GLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNA-NAVRSMEKV 604
Query: 477 XXXXSVYLYCSHRT 490
S Y C RT
Sbjct: 605 MEIHSKYWRCLQRT 618
Score = 40 (19.1 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 554 LALEGGHDLTAICDASEACVSALLGNELDPLP 585
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 426 (155.0 bits), Expect = 1.6e-54, Sum P(3) = 1.6e-54
Identities = 75/143 (52%), Positives = 103/143 (72%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G ++NG+A++RPPGHH+ ++ G+C FN+VA+AA+HA + R+LIVD
Sbjct: 67 LQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVD 126
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WD+HHGQ TQ +F +D V+YFS HRYEHG FWP LRES+ D +G G G G+ N+P N+
Sbjct: 127 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 186
Query: 232 THMKDADYMAVFHQ-VLLPMVAE 253
M +ADYM F Q VLLP+ E
Sbjct: 187 VGMGNADYMPAFLQXVLLPLAFE 209
Score = 181 (68.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 35/72 (48%), Positives = 50/72 (69%)
Query: 359 GMSDPEYIAAF-QQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 417
GM + +Y+ AF Q V+LP+A++FN ELVLVSAG+D+ + D G + +PE +AH T L+
Sbjct: 188 GMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQ 247
Query: 418 ALAQGRIILALE 429
LA GR+ LE
Sbjct: 248 VLAGGRVCAVLE 259
Score = 102 (41.0 bits), Expect = 1.6e-54, Sum P(3) = 1.6e-54
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
GL QRC + REA++ E+ H + T ST+ L+ LS +DA+Y HPS++
Sbjct: 2 GLEQRCLRLVAREASEAELGLVH---RSGXRGTQALSTE--ELQALSRQFDAVYFHPSTF 56
Query: 75 KLSLLSAGSTIEL 87
+ L+AG+ ++L
Sbjct: 57 HCARLAAGAALQL 69
Score = 64 (27.6 bits), Expect = 1.6e-54, Sum P(3) = 1.6e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAG 390
+++ ++LP+AY F P+LVLV G
Sbjct: 502 FLSCVLALVLPLAYSFQPDLVLVVLG 527
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 391 (142.7 bits), Expect = 5.3e-54, Sum P(2) = 5.3e-54
Identities = 89/246 (36%), Positives = 133/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTE-GSTDVDALEQLSSHYDAIYIH 70
+E GL +C+ I+ R+AT EE+ H+ L T +D+ + L S ++++
Sbjct: 690 QETGLRGKCECIRGRKATLEELQTVHSETHALLYGTNPLNRQKLDSKKLLGS-LTSVFV- 747
Query: 71 PSSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
+L G + N+ + +ELV + GE+KNG AV+
Sbjct: 748 ----RLPCGGVGVDSDTIWNEVHSSGAARLAVGC------VVELVFKVATGELKNGFAVV 797
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+C+FN+VA+AA+ SVS+ L+VDWDVHHG TQQ FY+D RV
Sbjct: 798 RPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPRV 857
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P D +G G G G+N N+ M DA+Y+A F V+
Sbjct: 858 LYISLHRYDDGNFFPG--SGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVV 915
Query: 248 LPMVAE 253
+P+ +E
Sbjct: 916 MPIASE 921
Score = 236 (88.1 bits), Expect = 5.3e-54, Sum P(2) = 5.3e-54
Identities = 53/117 (45%), Positives = 78/117 (66%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 902 MGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 961
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S++
Sbjct: 962 GLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSME 1018
Score = 40 (19.1 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 970 LALEGGHDLTAICDASEACVSALLGNELDPLP 1001
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 382 (139.5 bits), Expect = 8.3e-54, Sum P(2) = 8.3e-54
Identities = 90/246 (36%), Positives = 130/246 (52%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ IQ R+A+ EEI H+ E LL G+ +D ++L I +
Sbjct: 669 QETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLY---GTNPLDG-QKLDPR---ILLGD 720
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K S L G L + IEL + GE+KNG AV+
Sbjct: 721 DSQKFFSSLPCGG---LGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVV 777
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A++ D ++S++LIVD DVHHG TQQ FY D +
Sbjct: 778 RPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSI 837
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P + +G G+G+GYN NI M D +Y+ F ++
Sbjct: 838 LYISLHRYDEGNFFPG--SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIV 895
Query: 248 LPMVAE 253
P+ E
Sbjct: 896 KPVAKE 901
Score = 245 (91.3 bits), Expect = 8.3e-54, Sum P(2) = 8.3e-54
Identities = 53/117 (45%), Positives = 77/117 (65%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVND--PLGGCKVSPEAYAHFTHWLK 417
M D EY+ AF+ ++ P+A +F+P++VLVSAG+DA PLGG KV+ + + H T L
Sbjct: 882 MGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLM 941
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDL--DINSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L PL E L N +AV S++
Sbjct: 942 TLADGRVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQSPNMNAVISLQ 998
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 323 (118.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 75/213 (35%), Positives = 105/213 (49%)
Query: 49 EGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXX 108
E + + L + HYD ++ S K + T EL + Q
Sbjct: 150 EATKEEICLVHYAKHYD--WVKELSTKPTAQLRRLTKELDKGQTSVYVGSLTFEASLISA 207
Query: 109 XXTIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQ--HALDNTSVSR 166
IE +I G+IKNG AVIRPPGHHA + G+C FNNV +AA+ A +
Sbjct: 208 GGAIETCKSIVSGQIKNGFAVIRPPGHHAEQDSAMGFCIFNNVPIAAKVCQAEYPEICQK 267
Query: 167 VLIVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRES------EYDHIGEGIG 220
VLI+DWDVHHG Q +FY D V+Y S+H Y++G F+P E+ G G G
Sbjct: 268 VLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISSCGSGPG 327
Query: 221 KGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAE 253
G N NI + M D +Y+A F ++++P+ E
Sbjct: 328 LGRNINIGWDDQGMGDGEYIAAFQKIIMPIAHE 360
Score = 307 (113.1 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 54/97 (55%), Positives = 74/97 (76%)
Query: 358 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 417
+GM D EYIAAFQ++I+PIA++FNP+LV++SAG+DA D LGGC V+P YAH TH L
Sbjct: 339 QGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAGDQLGGCFVTPPCYAHMTHMLM 398
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
+LA GR+ + LEGGYN+S+IS + + L+G+P P
Sbjct: 399 SLAHGRVAVCLEGGYNLSAISKSALAVARTLMGEPPP 435
Score = 73 (30.8 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 23 IQPREATQEEILKKHTIEQIELLA--TTEGSTDVDAL-EQLSSHYDAIYIHPSSYKLSLL 79
I REAT+EEI H + + + +T+ + + L ++L ++Y+ +++ SL+
Sbjct: 146 IPAREATKEEICLVHYAKHYDWVKELSTKPTAQLRRLTKELDKGQTSVYVGSLTFEASLI 205
Query: 80 SAGSTIE 86
SAG IE
Sbjct: 206 SAGGAIE 212
Score = 64 (27.6 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 232 THMKDADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSERPK 291
THM M++ H + + EGGY L ++++ A R L+ +P P +G S PK
Sbjct: 394 THM----LMSLAHG-RVAVCLEGGYNLSAISKSALAVARTLMGEPPPK---MGMAS--PK 443
Query: 292 IWKEGKQCLVLALKHIVP 309
I +E + L + P
Sbjct: 444 INREAARLLAQVQAYQAP 461
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 426 (155.0 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 75/143 (52%), Positives = 103/143 (72%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LVD + G ++NG+A++RPPGHH+ ++ G+C FN+VA+AA+HA + R+LIVD
Sbjct: 81 LQLVDAVMAGVVRNGLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVD 140
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
WD+HHGQ TQ +F +D V+YFS HRYEHG FWP LRES+ D +G G G G+ N+P N+
Sbjct: 141 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 200
Query: 232 THMKDADYMAVFHQ-VLLPMVAE 253
M +ADYM F Q VLLP+ E
Sbjct: 201 VGMGNADYMPAFLQXVLLPLAFE 223
Score = 181 (68.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 35/72 (48%), Positives = 50/72 (69%)
Query: 359 GMSDPEYIAAF-QQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLK 417
GM + +Y+ AF Q V+LP+A++FN ELVLVSAG+D+ + D G + +PE +AH T L+
Sbjct: 202 GMGNADYMPAFLQXVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQ 261
Query: 418 ALAQGRIILALE 429
LA GR+ LE
Sbjct: 262 VLAGGRVCAVLE 273
Score = 96 (38.9 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYK 75
L QRC + REA++ E+ H + T ST+ L+ LS +DA+Y HPS++
Sbjct: 17 LEQRCLRLVAREASEAELGLVH---RSGXRGTQALSTE--ELQALSRQFDAVYFHPSTFH 71
Query: 76 LSLLSAGSTIEL 87
+ L+AG+ ++L
Sbjct: 72 CARLAAGAALQL 83
Score = 64 (27.6 bits), Expect = 1.5e-53, Sum P(3) = 1.5e-53
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAG 390
+++ ++LP+AY F P+LVLV G
Sbjct: 514 FLSCVLALVLPLAYSFQPDLVLVVLG 539
Score = 37 (18.1 bits), Expect = 9.6e-51, Sum P(3) = 9.6e-51
Identities = 19/78 (24%), Positives = 28/78 (35%)
Query: 348 PGCYPHRTKSKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPE 407
P C+ H T+ + + A +VI PE + V P G S +
Sbjct: 250 PECFAHLTQLLQVLAGGRVCAVLEVIAAGREDAGPE---AEGQREGMV--PHGSALQSIQ 304
Query: 408 AY--AHFTHWLKALAQGR 423
+ A HW+ QGR
Sbjct: 305 SVRAAQAPHWMSLRQQGR 322
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 388 (141.6 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 90/245 (36%), Positives = 135/245 (55%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL +C+ I+ R+AT EE+ H+ E LL G+ ++ ++L S ++++
Sbjct: 688 QETGLRGKCECIRGRKATLEELQTVHS-EAHTLLY---GTNPLNR-QKLDSSLTSVFV-- 740
Query: 72 SSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVIR 131
+L G + N+ + +ELV + GE+KNG AV+R
Sbjct: 741 ---RLPCGGVGVDSDTIWNEVHSSGAARLAVGC------VVELVFKVATGELKNGFAVVR 791
Query: 132 PPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVV 191
PPGHHA +S G+C+FN+VA+AA+ +VS++LIVDWDVHHG TQQ FYND V+
Sbjct: 792 PPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVL 851
Query: 192 YFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVLL 248
Y S+HRY+ G F+P D +G G G G+N N+ M DA+Y+A F V++
Sbjct: 852 YMSLHRYDDGNFFPG--SGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVM 909
Query: 249 PMVAE 253
P+ E
Sbjct: 910 PIANE 914
Score = 235 (87.8 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 54/117 (46%), Positives = 78/117 (66%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 895 MGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 954
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GRI+LALEGG+++++I A C ALLG+ L PL E L N++AV S++
Sbjct: 955 GLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSME 1011
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 385 (140.6 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 89/246 (36%), Positives = 133/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTE-GSTDVDALEQLSSHYDAIYIH 70
+E GL +C+ I+ R+AT EE+ H+ L T +D+ + L S ++++
Sbjct: 690 QETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGS-LASVFV- 747
Query: 71 PSSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
+L G + N+ + +ELV + GE+KNG AV+
Sbjct: 748 ----RLPCGGVGVDSDTIWNEVHSAGAARLAVGC------VVELVFKVATGELKNGFAVV 797
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+C+FN+VA+AA+ SVS++LIVDWDVHHG TQQ FY+D V
Sbjct: 798 RPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSV 857
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P D +G G G G+N N+ M DA+Y+A F V+
Sbjct: 858 LYMSLHRYDDGNFFPG--SGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVV 915
Query: 248 LPMVAE 253
+P+ +E
Sbjct: 916 MPIASE 921
Score = 239 (89.2 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 56/134 (41%), Positives = 79/134 (58%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + T L
Sbjct: 902 MGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLM 961
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSSAVTSIKVXXXX 476
LA GRI+LALEGG+++++I A C ALLG+ L PL E L +A +++
Sbjct: 962 GLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNA-NAVRSMEKV 1020
Query: 477 XXXXSVYLYCSHRT 490
S Y C RT
Sbjct: 1021 MEIHSKYWRCLQRT 1034
Score = 40 (19.1 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 970 LALEGGHDLTAICDASEACVSALLGNELDPLP 1001
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 389 (142.0 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 90/245 (36%), Positives = 136/245 (55%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL +C+ I+ R+AT EE+ H+ E LL G+ ++ ++L S ++++
Sbjct: 687 QETGLRGKCECIRGRKATLEELQTVHS-EAHTLLY---GTNPLNR-QKLDSSLTSVFV-- 739
Query: 72 SSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVIR 131
+L G + N+ + +ELV + GE+KNG AV+R
Sbjct: 740 ---RLPCGGVGVDSDTIWNEVHSSGAARLAVGC------VVELVFKVATGELKNGFAVVR 790
Query: 132 PPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVV 191
PPGHHA +S G+C+FN+VA+AA+ +VS++LIVDWDVHHG TQQ FYND V+
Sbjct: 791 PPGHHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVL 850
Query: 192 YFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVLL 248
Y S+HRY+ G F+P D +G G G G+N N+ + M DA+Y+A F V++
Sbjct: 851 YMSLHRYDDGNFFPG--SGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVM 908
Query: 249 PMVAE 253
P+ E
Sbjct: 909 PIANE 913
Score = 233 (87.1 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 53/117 (45%), Positives = 78/117 (66%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 894 MGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 953
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S++
Sbjct: 954 GLAGGRLVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAVHSME 1010
Score = 38 (18.4 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 248 LPMVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
L + EGG+ L ++ + + + ALL +P P
Sbjct: 960 LVLALEGGHDLTAICDASEACVSALLGNELEPLP 993
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 381 (139.2 bits), Expect = 4.6e-53, Sum P(2) = 4.6e-53
Identities = 90/246 (36%), Positives = 131/246 (53%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ IQ R+A+ EEI H+ E LL G+ +D ++L +
Sbjct: 671 QETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLY---GTNPLDG-QKLDPR---TLLGD 722
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
+S K+ S L G L + IEL + GE+KNG AV+
Sbjct: 723 TSQKIFSSLPCGG---LGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVV 779
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A++ D ++S++LIVD DVHHG TQQ FY D +
Sbjct: 780 RPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSI 839
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P + +G G+G+GYN NI M D +Y+ F V+
Sbjct: 840 LYISLHRYDEGNFFPG--SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAFRTVV 897
Query: 248 LPMVAE 253
P+ E
Sbjct: 898 TPVAKE 903
Score = 240 (89.5 bits), Expect = 4.6e-53, Sum P(2) = 4.6e-53
Identities = 53/117 (45%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVND--PLGGCKVSPEAYAHFTHWLK 417
M D EY+ AF+ V+ P+A +F+P++VLVSAG+DA PLGG KV+ + + H T L
Sbjct: 884 MGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHLTKQLM 943
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA G ++LALEGG+++++I A C ALLG+ L PL E L N +AV S++
Sbjct: 944 TLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQTPNMNAVISLQ 1000
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 383 (139.9 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 89/246 (36%), Positives = 130/246 (52%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTE-GSTDVDALEQLSSHYDAIYIH 70
+E GL +C+ I+ R+AT EE+ H+ L T +D+ + L S ++++
Sbjct: 689 QETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGS-LTSVFV- 746
Query: 71 PSSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
+L G + N+ + +ELV + GE+KNG AV+
Sbjct: 747 ----RLPCGGVGVDSDTIWNEVHSSGAARLAVGC------VVELVFKVATGELKNGFAVV 796
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+C+FN+VA+AA+ VS+ LIVDWDVHHG TQQ FYND V
Sbjct: 797 RPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLDVSKTLIVDWDVHHGNGTQQAFYNDPNV 856
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P D +G G G G+N N+ M DA+Y+A F V+
Sbjct: 857 LYISLHRYDDGNFFPG--SGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVV 914
Query: 248 LPMVAE 253
+P+ E
Sbjct: 915 MPIANE 920
Score = 237 (88.5 bits), Expect = 5.4e-53, Sum P(2) = 5.4e-53
Identities = 54/117 (46%), Positives = 78/117 (66%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 901 MGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 960
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GRI+LALEGG+++++I A C ALLG+ L PL E L N++AV S++
Sbjct: 961 GLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSME 1017
Score = 44 (20.5 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 252 AEGGYCLKSLA-EGAALTLRALLDDPCPNFETLGTPSERPKIWKEGKQ 298
AE G + + EG+ L PN TLG P+ P G+Q
Sbjct: 325 AETGLAHRLVTREGSVAPLPLYTSPSLPNI-TLGLPATGPSAGAAGQQ 371
Score = 40 (19.1 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 969 LALEGGHDLTAICDASEACVSALLGNELDPLP 1000
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 368 (134.6 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 68/145 (46%), Positives = 96/145 (66%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++LV + GE++NG AV+RPPGHHA +S G+C+FN+VA+AA+ +VS++LIVD
Sbjct: 718 VDLVFKVASGELRNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVD 777
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN- 230
WDVHHG TQQ FY+D V+Y S+HRY+ G F+P D +G G G G+N N+
Sbjct: 778 WDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPG--SGAPDEVGIGPGVGFNVNMAFTG 835
Query: 231 --KTHMKDADYMAVFHQVLLPMVAE 253
+ M DADY+A F V++P+ E
Sbjct: 836 GLEPPMGDADYLAAFTSVVMPIANE 860
Score = 233 (87.1 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 50/117 (42%), Positives = 79/117 (67%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D +Y+AAF V++PIA +F+P++VLVS+G+DA P LGG K++ + + + T L
Sbjct: 841 MGDADYLAAFTSVVMPIANEFSPDVVLVSSGFDAVEGHPPPLGGYKLTAKCFGYLTKQLM 900
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L P+ E L N++A+ S++
Sbjct: 901 GLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPIPEDILQQRPNANAIQSME 957
Score = 55 (24.4 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
+E GL +C+ I+ R+AT EE+ H+ + L T
Sbjct: 635 QETGLRGQCECIRGRKATLEELQTVHSEAHVLLYGT 670
Score = 43 (20.2 bits), Expect = 4.6e-51, Sum P(3) = 4.6e-51
Identities = 13/82 (15%), Positives = 35/82 (42%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
K+ +QR I+ + E++ ++H + E + + + ++L H + H
Sbjct: 49 KQKQQIQRQLLIEEFQRQHEQLSRQHEAQLQEHVKHQQDLLALKHQQELLEHQRKLERHR 108
Query: 72 SSYKLSLLSAGSTIELRRNQKR 93
++ ++L +N++R
Sbjct: 109 QEQEMEKQQREQKLQLLKNKER 130
Score = 42 (19.8 bits), Expect = 2.0e-32, Sum P(3) = 2.0e-32
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 248 LPMVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
L + EGG+ L ++ + + + ALL DP P
Sbjct: 907 LVLALEGGHDLTAICDASEACVSALLGNELDPIP 940
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 371 (135.7 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 69/145 (47%), Positives = 93/145 (64%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
IELV + GE+KNG AV+RPPGHHA +S G+C+FN+VA+AA+ +VS++LIVD
Sbjct: 757 IELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVD 816
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN- 230
WDVHHG TQQ FYND V+Y S+HRY+ G F+P D +G G G G+N N+
Sbjct: 817 WDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPG--SGAPDEVGTGAGVGFNVNMAFTG 874
Query: 231 --KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+ F V++P+ E
Sbjct: 875 GLDPPMGDTEYLTAFRTVVMPIANE 899
Score = 233 (87.1 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 52/117 (44%), Positives = 77/117 (65%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+ AF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 880 MGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 939
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD--INSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S++
Sbjct: 940 GLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME 996
Score = 52 (23.4 bits), Expect = 2.5e-52, Sum P(3) = 2.5e-52
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
+E GL +C+ I+ R+AT EE+ H+
Sbjct: 664 QETGLRGKCECIRGRKATLEELQTVHS 690
Score = 40 (19.1 bits), Expect = 3.2e-32, Sum P(3) = 3.2e-32
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 948 LALEGGHDLTAICDASEACVSALLGNELDPLP 979
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 380 (138.8 bits), Expect = 3.4e-52, Sum P(2) = 3.4e-52
Identities = 91/245 (37%), Positives = 133/245 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL +C+ I+ R+AT EE+ H+ E LL G+ ++ ++L S +H
Sbjct: 680 QETGLRGKCECIRGRKATLEELQTVHS-EAHTLLY---GTNPLNR-QKLDSKKLLGIVH- 733
Query: 72 SSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVIR 131
LS + G+ + + + N IELV + GE+KNG AV+R
Sbjct: 734 ----LSFV--GTAVGVDSDTIWN--EVHSSGAARLAVGCVIELVFKVATGELKNGFAVVR 785
Query: 132 PPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVV 191
PPGHHA +S G+C+FN+VA+AA+ +VS++LIVDWDVHHG TQQ FYND V+
Sbjct: 786 PPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVL 845
Query: 192 YFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVLL 248
Y S+HRY+ G F+P D +G G G G+N N+ M D +Y+ F V++
Sbjct: 846 YISLHRYDDGNFFPG--SGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVM 903
Query: 249 PMVAE 253
P+ E
Sbjct: 904 PIANE 908
Score = 233 (87.1 bits), Expect = 3.4e-52, Sum P(2) = 3.4e-52
Identities = 52/117 (44%), Positives = 77/117 (65%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+ AF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 889 MGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 948
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD--INSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S++
Sbjct: 949 GLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME 1005
Score = 40 (19.1 bits), Expect = 6.3e-32, Sum P(2) = 6.3e-32
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 957 LALEGGHDLTAICDASEACVSALLGNELDPLP 988
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 380 (138.8 bits), Expect = 3.5e-52, Sum P(2) = 3.5e-52
Identities = 88/246 (35%), Positives = 130/246 (52%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTE-GSTDVDALEQLSSHYDAIYIH 70
+E GL +C+ I+ R+AT EE+ H+ L T +D+ + L S ++++
Sbjct: 686 QETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGS-LTSMFV- 743
Query: 71 PSSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
+L G + N+ + IELV + GE+KNG AV+
Sbjct: 744 ----RLPCGGVGVDSDTIWNEVHSSGAARLAVGC------VIELVFKVATGELKNGFAVV 793
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+C+FN+VA+AA+ +VS++LIVDWDVHHG TQQ FYND V
Sbjct: 794 RPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNV 853
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P D +G G G G+N N+ M D +Y+ F V+
Sbjct: 854 LYISLHRYDDGNFFPG--SGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVV 911
Query: 248 LPMVAE 253
+P+ E
Sbjct: 912 MPIANE 917
Score = 233 (87.1 bits), Expect = 3.5e-52, Sum P(2) = 3.5e-52
Identities = 52/117 (44%), Positives = 77/117 (65%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+ AF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 898 MGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 957
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD--INSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S++
Sbjct: 958 GLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME 1014
Score = 40 (19.1 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 966 LALEGGHDLTAICDASEACVSALLGNELDPLP 997
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 373 (136.4 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 89/246 (36%), Positives = 134/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 259 QETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 310
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 311 ISQKMYAVLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII 367
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ + +V +VLIVDWD+HHG TQQ FYND V
Sbjct: 368 RPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSV 427
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 428 LYISLHRYDNGNFFPGSGAPE--EVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 485
Query: 248 LPMVAE 253
+P+ E
Sbjct: 486 MPIAHE 491
Score = 230 (86.0 bits), Expect = 4.5e-52, Sum P(2) = 4.5e-52
Identities = 51/117 (43%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 472 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 531
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV +++
Sbjct: 532 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 588
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 377 (137.8 bits), Expect = 7.9e-52, Sum P(2) = 7.9e-52
Identities = 88/246 (35%), Positives = 132/246 (53%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTE-GSTDVDALEQLSSHYDAIYIH 70
+E GL +C+ I+ R+AT EE+ H+ L T +D+ ++L ++I
Sbjct: 659 QETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDS-KKLLDVITTVFIG 717
Query: 71 PSSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
++++ + TI N+ + IELV + GE+KNG AV+
Sbjct: 718 TPVGGVNVVDS-DTIW---NEVHSSGAARLAVGC------VIELVFKVATGELKNGFAVV 767
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+C+FN+VA+AA+ +VS++LIVDWDVHHG TQQ FYND V
Sbjct: 768 RPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNV 827
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P D +G G G G+N N+ M D +Y+ F V+
Sbjct: 828 LYISLHRYDDGNFFPG--SGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVV 885
Query: 248 LPMVAE 253
+P+ E
Sbjct: 886 MPIANE 891
Score = 233 (87.1 bits), Expect = 7.9e-52, Sum P(2) = 7.9e-52
Identities = 52/117 (44%), Positives = 77/117 (65%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+ AF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 872 MGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 931
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD--INSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L PL E L N++AV S++
Sbjct: 932 GLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSME 988
Score = 40 (19.1 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 940 LALEGGHDLTAICDASEACVSALLGNELDPLP 971
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 376 (137.4 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 90/246 (36%), Positives = 135/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 505 QETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 556
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 557 ISQKMYAMLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII 613
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A+ SV +VLIVDWD+HHG TQQ FY+D V
Sbjct: 614 RPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSV 673
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 674 LYISLHRYDNGNFFPGSGAPE--EVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 731
Query: 248 LPMVAE 253
+P+ E
Sbjct: 732 MPIAHE 737
Score = 228 (85.3 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 51/117 (43%), Positives = 75/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 718 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 777
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV +++
Sbjct: 778 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLE 834
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 376 (137.4 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 90/246 (36%), Positives = 135/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 505 QETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 556
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 557 ISQKMYAMLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII 613
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A+ SV +VLIVDWD+HHG TQQ FY+D V
Sbjct: 614 RPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSV 673
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 674 LYISLHRYDNGNFFPGSGAPE--EVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 731
Query: 248 LPMVAE 253
+P+ E
Sbjct: 732 MPIAHE 737
Score = 228 (85.3 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 51/117 (43%), Positives = 75/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 718 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 777
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV +++
Sbjct: 778 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLE 834
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 380 (138.8 bits), Expect = 2.1e-51, Sum P(2) = 2.1e-51
Identities = 91/246 (36%), Positives = 135/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 710 QETGLLGKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 761
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 762 ISQKMYAMLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII 818
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A+ SV +VLIVDWD+HHG TQQ FYND V
Sbjct: 819 RPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSV 878
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 879 LYISLHRYDNGNFFPGSGAPE--EVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 936
Query: 248 LPMVAE 253
+P+ E
Sbjct: 937 MPIAQE 942
Score = 226 (84.6 bits), Expect = 2.1e-51, Sum P(2) = 2.1e-51
Identities = 53/133 (39%), Positives = 76/133 (57%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA +F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 923 IGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 982
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSSAVTSIKVXXXX 476
LA GR++LALEGG+++++I A C ALL L PL E+ L S V ++
Sbjct: 983 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPS-VNAVATLEKV 1041
Query: 477 XXXXSVYLYCSHR 489
S + C R
Sbjct: 1042 IEIQSKHWSCVQR 1054
Score = 37 (18.1 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 24 QPREATQEEILKKHTIEQIELLATTEGSTD 53
Q + QEE+ K+ +Q+ +L E S +
Sbjct: 137 QREQQRQEELEKQRLEQQLLILRNKEKSKE 166
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 376 (137.4 bits), Expect = 2.9e-51, Sum P(2) = 2.9e-51
Identities = 90/246 (36%), Positives = 135/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 719 QETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 770
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 771 ISQKMYAVLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLLELAFKVAAGELKNGFAII 827
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A+ +V +VLIVDWD+HHG TQQ FYND V
Sbjct: 828 RPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSV 887
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 888 LYISLHRYDNGNFFPGSGAPE--EVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 945
Query: 248 LPMVAE 253
+P+ E
Sbjct: 946 MPIAHE 951
Score = 230 (86.0 bits), Expect = 2.9e-51, Sum P(2) = 2.9e-51
Identities = 51/117 (43%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 932 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 991
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV +++
Sbjct: 992 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1048
Score = 38 (18.4 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 30 QEEI-LKKHTIEQIELLATTE 49
Q E+ L+KH +Q E+LA +
Sbjct: 108 QHEVQLQKHLKQQQEMLAAKQ 128
Score = 37 (18.1 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 24 QPREATQEEILKKHTIEQIELLATTEGSTD 53
Q + QEE+ K+ +Q+ +L E S +
Sbjct: 146 QREQQRQEELEKQRLEQQLLILRNKEKSKE 175
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 374 (136.7 bits), Expect = 5.3e-51, Sum P(2) = 5.3e-51
Identities = 89/246 (36%), Positives = 134/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 722 QETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 773
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 774 ISQKMYAMLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII 830
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ + +V +VLIVDWD+HHG TQQ FYND V
Sbjct: 831 RPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSV 890
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 891 LYISLHRYDNGNFFPGSGAPE--EVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 948
Query: 248 LPMVAE 253
+P+ E
Sbjct: 949 MPIAHE 954
Score = 230 (86.0 bits), Expect = 5.3e-51, Sum P(2) = 5.3e-51
Identities = 51/117 (43%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 935 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 994
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV +++
Sbjct: 995 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1051
Score = 43 (20.2 bits), Expect = 4.8e-14, Sum P(4) = 4.8e-14
Identities = 29/106 (27%), Positives = 39/106 (36%)
Query: 270 RALLDDPCPNFETLGTPSERPKIWKEGKQCLVLALKHIVPQNSILSNLDRASRRFKLLTF 329
RAL D PN +L T P I G Q V + + LS A R+ L
Sbjct: 350 RALPPDTSPNQFSLYTSPSLPNI-SLGLQATVTVTNSHLTASPKLSTQQEAERQ--ALQS 406
Query: 330 VHLPAENTDVPLLFLLQIPGCYPHRTKSKGMSDPE-YIAAFQQVIL 374
+ T + IPGC +G S P + + Q V+L
Sbjct: 407 LRQGGALTG-KFMSTSSIPGCLLG-VALEGDSSPHGHASLLQHVLL 450
Score = 38 (18.4 bits), Expect = 4.8e-14, Sum P(4) = 4.8e-14
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 71 PSSYKLSLL 79
PSSYKL LL
Sbjct: 235 PSSYKLPLL 243
Score = 37 (18.1 bits), Expect = 4.8e-14, Sum P(4) = 4.8e-14
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 24 QPREATQEEILKKHTIEQIELLATTEGSTD 53
Q + QEE+ K+ +Q+ +L E S +
Sbjct: 146 QREQQRQEELEKQRLEQQLLILRNKEKSKE 175
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 355 (130.0 bits), Expect = 6.1e-51, Sum P(2) = 6.1e-51
Identities = 84/245 (34%), Positives = 128/245 (52%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+A+ EEI H+ E LL G++ ++ ++L + +
Sbjct: 670 QETGLLNKCERIRGRKASLEEIQLVHS-EHHSLLY---GTSPLNR-QKLDPR--KLLGNV 722
Query: 72 SSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVIR 131
S SLL G L + IEL + E+KNG AV+R
Sbjct: 723 SQKLFSLLPCGG---LGVDSDTVWNELHSAGAARMAVGCVIELAARVASRELKNGFAVVR 779
Query: 132 PPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVV 191
PPGHHA +S G+CFFN++A+ A++ D ++ ++LIVD DVHHG TQQ FY D ++
Sbjct: 780 PPGHHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSIL 839
Query: 192 YFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVLL 248
Y S+HRY+ G F+P + +G G G+G+N NI M D +Y+ F V++
Sbjct: 840 YVSLHRYDEGNFFPG--SGAPNEVGSGPGEGFNINIAWTGGLDPPMGDVEYLTAFRTVIM 897
Query: 249 PMVAE 253
P E
Sbjct: 898 PAANE 902
Score = 251 (93.4 bits), Expect = 6.1e-51, Sum P(2) = 6.1e-51
Identities = 56/117 (47%), Positives = 79/117 (67%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACV-NDP-LGGCKVSPEAYAHFTHWLK 417
M D EY+ AF+ VI+P A +F+PE+VLVSAG+DA +DP LGG KV+ + + H T L
Sbjct: 883 MGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLL 942
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDL--DI-NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALLG+ L L D+ I N +A+ S+K
Sbjct: 943 KLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIPNMNAIASLK 999
Score = 38 (18.4 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL +P P
Sbjct: 951 LALEGGHDLTAICDASEACINALLGNELEPLP 982
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 373 (136.4 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 89/246 (36%), Positives = 134/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 687 QETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 738
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 739 ISQKMYAMLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII 795
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ + +V +VLIVDWD+HHG TQQ FYND V
Sbjct: 796 RPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSV 855
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 856 LYISLHRYDNGNFFPGSGAPE--EVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 913
Query: 248 LPMVAE 253
+P+ E
Sbjct: 914 MPIAHE 919
Score = 230 (86.0 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 51/117 (43%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 900 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 959
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV +++
Sbjct: 960 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1016
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 373 (136.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 89/246 (36%), Positives = 134/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 714 QETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 765
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 766 ISQKMYAMLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII 822
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ + +V +VLIVDWD+HHG TQQ FYND V
Sbjct: 823 RPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSV 882
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 883 LYISLHRYDNGNFFPGSGAPE--EVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 940
Query: 248 LPMVAE 253
+P+ E
Sbjct: 941 MPIAHE 946
Score = 230 (86.0 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 51/117 (43%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 927 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 986
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV +++
Sbjct: 987 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1043
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 374 (136.7 bits), Expect = 8.2e-51, Sum P(2) = 8.2e-51
Identities = 89/246 (36%), Positives = 135/246 (54%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ I+ R+AT +EI H+ E LL G++ ++ ++L S + P
Sbjct: 708 QETGLLSKCERIRGRKATLDEIQTVHS-EYHTLLY---GTSPLNR-QKLDSKK---LLGP 759
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
S K+ ++L G I + + N +EL + GE+KNG A+I
Sbjct: 760 ISQKMYAMLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLVELAFKVAAGELKNGFAII 816
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A+ +V +VLIVDWD+HHG TQQ FY+D V
Sbjct: 817 RPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSV 876
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY++G F+P E +G G G GYN N+ + D +Y+ F V+
Sbjct: 877 LYISLHRYDNGNFFPGSGAPE--EVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVV 934
Query: 248 LPMVAE 253
+P+ E
Sbjct: 935 MPIAHE 940
Score = 228 (85.3 bits), Expect = 8.2e-51, Sum P(2) = 8.2e-51
Identities = 51/117 (43%), Positives = 75/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 921 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 980
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV +++
Sbjct: 981 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLE 1037
Score = 37 (18.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 24 QPREATQEEILKKHTIEQIELLATTEGSTD 53
Q + QEE+ K+ +Q+ +L E S +
Sbjct: 137 QREQQRQEELEKQRLEQQLLILRNKEKSKE 166
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 371 (135.7 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
Identities = 89/247 (36%), Positives = 131/247 (53%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTE-GSTDVDALEQLSSHYDAIYIH 70
+E GL+ +C+ I+ R+AT +EI H+ L T+ VD+ + L
Sbjct: 719 QETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKVDSKKLLG--------- 769
Query: 71 PSSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAV 129
P S K+ ++L G I + + N +EL + GE+KNG A+
Sbjct: 770 PISQKMYAVLPCGG-IGVDSDTVWN--EMHSSSAVRMAVGCLLELAFKVAAGELKNGFAI 826
Query: 130 IRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNR 189
IRPPGHHA +S G+CFFN+VA+ A+ +V +VLIVDWD+HHG TQQ FYND
Sbjct: 827 IRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPS 886
Query: 190 VVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIP-LNKTH--MKDADYMAVFHQV 246
V+Y S+HRY++G F+P E +G G G GYN N+ + + D +Y+ F V
Sbjct: 887 VLYISLHRYDNGNFFPGSGAPE--EVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTAFRTV 944
Query: 247 LLPMVAE 253
++P+ E
Sbjct: 945 VMPIAHE 951
Score = 230 (86.0 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
Identities = 51/117 (43%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 932 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 991
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L N +AV +++
Sbjct: 992 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLE 1048
Score = 38 (18.4 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 30 QEEI-LKKHTIEQIELLATTE 49
Q E+ L+KH +Q E+LA +
Sbjct: 108 QHEVQLQKHLKQQQEMLAAKQ 128
Score = 37 (18.1 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 24 QPREATQEEILKKHTIEQIELLATTEGSTD 53
Q + QEE+ K+ +Q+ +L E S +
Sbjct: 146 QREQQRQEELEKQRLEQQLLILRNKEKSKE 175
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 365 (133.5 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 85/246 (34%), Positives = 129/246 (52%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTE-GSTDVDALEQLSSHYDAIYIH 70
+E GL +C+ I+ R+AT EE+ H+ L T +D+ + L S ++++
Sbjct: 658 QETGLRGKCECIRGRKATLEELQTVHSEAHALLYGTNPLNRQKLDSKKLLGS-LTSVFV- 715
Query: 71 PSSYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
+L G + ++ + +EL + GE+KNG AV+
Sbjct: 716 ----RLPCGGVGVDSDTIWSEVHSSGAARLAVGC------VVELAFKVATGELKNGFAVV 765
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+C+FN+VA+AA+ VS+ L+VDWDVHHG TQQ FY+D V
Sbjct: 766 RPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSV 825
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P D +G G G G+N N+ M DA+Y+A F V+
Sbjct: 826 LYVSLHRYDDGNFFPG--SGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVV 883
Query: 248 LPMVAE 253
+P+ E
Sbjct: 884 MPIANE 889
Score = 231 (86.4 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 48/100 (48%), Positives = 68/100 (68%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M D EY+AAF+ V++PIA +F P++VLVS+G+DA P LGG +S + + + T L
Sbjct: 870 MGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM 929
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLG---DPLP 454
LA GR++LALEGG+++++I A C ALLG DPLP
Sbjct: 930 GLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLP 969
Score = 40 (19.1 bits), Expect = 4.9e-30, Sum P(2) = 4.9e-30
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLD---DPCP 278
+ EGG+ L ++ + + + ALL DP P
Sbjct: 938 LALEGGHDLTAICDASEACVSALLGNELDPLP 969
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 347 (127.2 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 85/243 (34%), Positives = 123/243 (50%)
Query: 13 ELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPS 72
E LV+RC ++ R+ATQEE+ HT L + + LE S A ++
Sbjct: 862 ETDLVKRCDRLRARKATQEELQTVHTEAHAMLFGSNQCQLSRPKLENTLS---ASFV--- 915
Query: 73 SYKLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVIRP 132
+LS G ++ N+ I+L +G+++NG AV+RP
Sbjct: 916 --RLSCGGLGVDLDTTWNEHHTATAARMAAGC------VIDLALKTAKGDLRNGFAVVRP 967
Query: 133 PGHHAMKSEYCGYCFFNNVALAAQHALDNT-SVSRVLIVDWDVHHGQATQQMFYNDNRVV 191
PGHHA + G+CFFN++A+AA+ V R+LIVDWDVHHG TQQ FY ++
Sbjct: 968 PGHHAEANLAMGFCFFNSIAIAAKLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQSPDIL 1027
Query: 192 YFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIP----LNKTHMKDADYMAVFHQVL 247
Y SIHR++ G F+P G G G G+N NI LN + DA+Y+A F V+
Sbjct: 1028 YLSIHRHDDGNFFPGTGGPT--ECGSGAGLGFNVNISWSGALNPP-LGDAEYIAAFRTVV 1084
Query: 248 LPM 250
+P+
Sbjct: 1085 MPI 1087
Score = 254 (94.5 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 50/105 (47%), Positives = 73/105 (69%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
+ D EYIAAF+ V++PIA FNP++VLVS+G+DA P LGG VSP + T L
Sbjct: 1071 LGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGGYHVSPACFGFMTRELL 1130
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLD 461
LA G+++LALEGGY++++I + C +ALLGDP P+ +++L+
Sbjct: 1131 QLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIAKAELE 1175
Score = 44 (20.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 196 HRYEHGTF-WPNLRESEYDH-IGEGIGKGYNFNIPL 229
H + HG+ P+ + H G GI G+ N+P+
Sbjct: 518 HGHGHGSHAHPHPHAHGHGHGHGHGIYAGHQHNVPI 553
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 345 (126.5 bits), Expect = 8.5e-50, Sum P(4) = 8.5e-50
Identities = 64/144 (44%), Positives = 89/144 (61%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + E+KNG AV+RPPGHHA S G+CFFN+VA+A + + S++LIVDW
Sbjct: 628 DLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDW 687
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN-- 230
DVHHG TQQ FY D RV+Y S+HR++ G F+P D +G G G+G+N N+
Sbjct: 688 DVHHGNGTQQTFYQDPRVLYISLHRHDDGNFFPG--SGAVDEVGTGSGEGFNVNVAWAGG 745
Query: 231 -KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+A F V++P+ E
Sbjct: 746 LDPPMGDPEYLAAFRIVVMPIARE 769
Score = 236 (88.1 bits), Expect = 8.5e-50, Sum P(4) = 8.5e-50
Identities = 53/117 (45%), Positives = 75/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AAF+ V++PIA +F P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 750 MGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLM 809
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLG---DPLPLLESDLDINSSAVTSIK 471
+LA G ++LALEGG+++++I A C ALLG DPL N +A+ S++
Sbjct: 810 SLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSQESWKQKPNLNAIRSLE 866
Score = 52 (23.4 bits), Expect = 8.5e-50, Sum P(4) = 8.5e-50
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
+E GL +C+ ++ R+A+ EE+ H+ + L T
Sbjct: 537 QERGLRSQCECLRGRKASLEELQSVHSERHVLLYGT 572
Score = 39 (18.8 bits), Expect = 8.5e-50, Sum P(4) = 8.5e-50
Identities = 5/7 (71%), Positives = 5/7 (71%)
Query: 516 HRPYWNC 522
HR YW C
Sbjct: 872 HRKYWGC 878
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 349 (127.9 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 66/144 (45%), Positives = 90/144 (62%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
EL + E+KNG AV+RPPGHHA S G+CFFN+VA+AA+ +S++LIVDW
Sbjct: 646 ELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDW 705
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN-- 230
DVHHG TQQ+FY D V+Y S+HR++ G F+P D +G G G+G+N NI
Sbjct: 706 DVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPG--SGAADEVGAGPGEGFNVNIAWTGG 763
Query: 231 -KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+A F V++P+ E
Sbjct: 764 LDPPMGDPEYLAAFRTVVMPIAHE 787
Score = 228 (85.3 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 52/117 (44%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AAF+ V++PIA++F+P++VLVSAG+DA P LGG KVS + + + T L
Sbjct: 768 MGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYMTKQLM 827
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLG---DPLPLLESDLDINSSAVTSIK 471
+LA G I+LALEGG+++++I A L DPLP N++AV S++
Sbjct: 828 SLAGGAIVLALEGGHDLTAICDASEAYPSHLSPWQLDPLPEESMRQKPNANAVRSLE 884
Score = 57 (25.1 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
+E GL +C+ ++ R+AT EE+ HT + L T
Sbjct: 555 QERGLRSQCECLRGRKATLEELQCVHTERHVFLYGT 590
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 338 (124.0 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 62/144 (43%), Positives = 87/144 (60%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + E+KNG AV+RPPGHHA S G+CFFN+VA+A + S++LI+DW
Sbjct: 646 DLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDW 705
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN-- 230
DVHHG TQQ FY D V+Y S+HR++ G F+P D +G G G+G+N N+
Sbjct: 706 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPG--SGAVDEVGAGSGEGFNVNVAWAGG 763
Query: 231 -KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+A F V++P+ E
Sbjct: 764 LDPPMGDPEYLAAFRMVVMPIARE 787
Score = 242 (90.2 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 50/101 (49%), Positives = 71/101 (70%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 768 MGDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLM 827
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLE 457
+LA G ++LALEGG+++++I A C ALLG+ + PL E
Sbjct: 828 SLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSE 868
Score = 52 (23.4 bits), Expect = 2.8e-49, Sum P(3) = 2.8e-49
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
+E GL +C+ ++ R+A+ EE+ H+ + L T
Sbjct: 555 QERGLRSQCECLRGRKASLEELQSVHSERHVLLYGT 590
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 339 (124.4 bits), Expect = 4.3e-49, Sum P(4) = 4.3e-49
Identities = 63/144 (43%), Positives = 88/144 (61%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + E+KNG AV+RPPGHHA S G+CFFN+VA+A + + S++LIVDW
Sbjct: 634 DLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDW 693
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN-- 230
DVHHG TQQ FY D V+Y S+HR++ G F+P D +G G G+G+N N+
Sbjct: 694 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPG--SGAVDEVGTGSGEGFNVNVAWAGG 751
Query: 231 -KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+A F V++P+ E
Sbjct: 752 LDPPMGDPEYLAAFRIVVMPIARE 775
Score = 237 (88.5 bits), Expect = 4.3e-49, Sum P(4) = 4.3e-49
Identities = 54/117 (46%), Positives = 76/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AAF+ V++PIA +F P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 756 MGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLM 815
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDI--NSSAVTSIK 471
LA G ++LALEGG+++++I A C ALLG+ + PL E N SA+ S++
Sbjct: 816 NLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQKPNLSAIRSLE 872
Score = 52 (23.4 bits), Expect = 4.3e-49, Sum P(4) = 4.3e-49
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
+E GL +C+ ++ R+A+ EE+ H+ + L T
Sbjct: 543 QERGLRSQCECLRGRKASLEELQSVHSERHVLLYGT 578
Score = 39 (18.8 bits), Expect = 4.3e-49, Sum P(4) = 4.3e-49
Identities = 5/7 (71%), Positives = 5/7 (71%)
Query: 516 HRPYWNC 522
HR YW C
Sbjct: 878 HRKYWGC 884
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 355 (130.0 bits), Expect = 5.5e-49, Sum P(2) = 5.5e-49
Identities = 66/145 (45%), Positives = 91/145 (62%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+EL + GE+KNG A+IRPPGHHA +S G+CFFN+VA+ A+ SV +VLIVD
Sbjct: 513 VELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVD 572
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN- 230
WD+HHG TQQ FY+D V+Y S+HRY++G F+P E +G G G GYN N+
Sbjct: 573 WDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPE--EVGGGPGVGYNVNVAWTG 630
Query: 231 --KTHMKDADYMAVFHQVLLPMVAE 253
+ D +Y+ F V++P+ E
Sbjct: 631 GVDPPIGDVEYLTAFRTVVMPIAHE 655
Score = 228 (85.3 bits), Expect = 5.5e-49, Sum P(2) = 5.5e-49
Identities = 51/117 (43%), Positives = 75/117 (64%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVN--DPLGGCKVSPEAYAHFTHWLK 417
+ D EY+ AF+ V++PIA++F+P++VLVSAG+DA PLGG V+ + H T L
Sbjct: 636 IGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLM 695
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLESDLDINSS--AVTSIK 471
LA GR++LALEGG+++++I A C ALL L PL E+ L S AV +++
Sbjct: 696 TLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLE 752
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 341 (125.1 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 63/144 (43%), Positives = 88/144 (61%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + E+KNG AV+RPPGHHA S G+CFFN+VA+A + + S++LIVDW
Sbjct: 647 DLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDW 706
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN-- 230
DVHHG TQQ FY D V+Y S+HR++ G F+P D +G G G+G+N N+
Sbjct: 707 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPG--SGAVDEVGAGSGEGFNVNVAWAGG 764
Query: 231 -KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+A F V++P+ E
Sbjct: 765 LDPPMGDPEYLAAFRIVVMPIARE 788
Score = 235 (87.8 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 50/101 (49%), Positives = 70/101 (69%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 769 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLM 828
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLE 457
LA G ++LALEGG+++++I A C ALLG+ + PL E
Sbjct: 829 NLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSE 869
Score = 52 (23.4 bits), Expect = 6.5e-49, Sum P(3) = 6.5e-49
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
+E GL +C+ ++ R+A+ EE+ H+ + L T
Sbjct: 556 QERGLRSQCECLRGRKASLEELQSVHSERHVLLYGT 591
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 339 (124.4 bits), Expect = 7.0e-49, Sum P(3) = 7.0e-49
Identities = 63/144 (43%), Positives = 87/144 (60%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + E+KNG AV+RPPGHHA S G+CFFN+VA+A + S++LIVDW
Sbjct: 683 DLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDW 742
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN-- 230
DVHHG TQQ FY D V+Y S+HR++ G F+P D +G G G+G+N N+
Sbjct: 743 DVHHGNGTQQTFYQDPNVLYISLHRHDDGNFFPG--SGAVDEVGAGSGEGFNVNVAWAGG 800
Query: 231 -KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+A F V++P+ E
Sbjct: 801 LDPPMGDPEYLAAFRIVVMPIARE 824
Score = 239 (89.2 bits), Expect = 7.0e-49, Sum P(3) = 7.0e-49
Identities = 50/101 (49%), Positives = 71/101 (70%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 805 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPPPLGGYHVSAKCFGYMTQQLM 864
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLE 457
+LA G ++LALEGG+++++I A C ALLG+ + PL E
Sbjct: 865 SLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSE 905
Score = 51 (23.0 bits), Expect = 7.0e-49, Sum P(3) = 7.0e-49
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 13 ELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
E GL +C+ ++ R+A+ EE+ H+ + L T
Sbjct: 593 ERGLRSQCESLRGRKASLEELQSVHSERHVLLYGT 627
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 341 (125.1 bits), Expect = 9.2e-49, Sum P(3) = 9.2e-49
Identities = 63/144 (43%), Positives = 88/144 (61%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L + E+KNG AV+RPPGHHA S G+CFFN+VA+A + + S++LIVDW
Sbjct: 703 DLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDW 762
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN-- 230
DVHHG TQQ FY D V+Y S+HR++ G F+P D +G G G+G+N N+
Sbjct: 763 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPG--SGAVDEVGAGSGEGFNVNVAWAGG 820
Query: 231 -KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+A F V++P+ E
Sbjct: 821 LDPPMGDPEYLAAFRIVVMPIARE 844
Score = 235 (87.8 bits), Expect = 9.2e-49, Sum P(3) = 9.2e-49
Identities = 50/101 (49%), Positives = 70/101 (69%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 825 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLM 884
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLE 457
LA G ++LALEGG+++++I A C ALLG+ + PL E
Sbjct: 885 NLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSE 925
Score = 52 (23.4 bits), Expect = 9.2e-49, Sum P(3) = 9.2e-49
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
+E GL +C+ ++ R+A+ EE+ H+ + L T
Sbjct: 612 QERGLRSQCECLRGRKASLEELQSVHSERHVLLYGT 647
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 309 (113.8 bits), Expect = 3.1e-48, Sum P(3) = 3.1e-48
Identities = 59/140 (42%), Positives = 84/140 (60%)
Query: 113 ELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
+L +I G +KNG A++RPPGHHA G+C NN A+AA A +VLIVDW
Sbjct: 254 DLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVA-QAAGAKKVLIVDW 312
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
DVHHG TQ++F + V+Y S+HR+E G F+P + D +G G+GY N+P +
Sbjct: 313 DVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAA--DEVGSNGGEGYCVNVPWSCG 370
Query: 233 HMKDADYMAVFHQVLLPMVA 252
+ D DY+ F V+LP+ +
Sbjct: 371 GVGDKDYIFAFQHVVLPIAS 390
Score = 242 (90.2 bits), Expect = 3.1e-48, Sum P(3) = 3.1e-48
Identities = 46/93 (49%), Positives = 63/93 (67%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +YI AFQ V+LPIA F+P+ V++SAG+DA DPLG C V+P Y+ T L
Sbjct: 371 GVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGD 430
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGD 451
L G++++ LEGGYN+ SIS + T K LLG+
Sbjct: 431 LCGGKMLVILEGGYNLRSISASATAVIKVLLGE 463
Score = 60 (26.2 bits), Expect = 3.1e-48, Sum P(3) = 3.1e-48
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 19 RCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA-IYIHPSSYKLS 77
RC I RE T++E+ HT E ++ + TT + L S++ + Y + S + +
Sbjct: 194 RCLPINAREITKQELQMVHTSEHVDAVDTTS--------QLLYSYFTSDTYANEYSARAA 245
Query: 78 LLSAGSTIEL 87
L+AG +L
Sbjct: 246 RLAAGLCADL 255
Score = 57 (25.1 bits), Expect = 5.4e-29, Sum P(3) = 5.4e-29
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALL-DDPCPNFETLGTPS 287
++ EGGY L+S++ A ++ LL ++P TPS
Sbjct: 438 VILEGGYNLRSISASATAVIKVLLGENPENELPIATTPS 476
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 302 (111.4 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 64/145 (44%), Positives = 90/145 (62%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIV 170
+I+L+ ++ + + G+A IRPPGHHAM E CG+C FNNVA+AA+ A+ N +VLIV
Sbjct: 114 SIDLMTSVMAAK-RPGIAFIRPPGHHAMPDEGCGFCIFNNVAIAAKAAIQNGQ--KVLIV 170
Query: 171 DWDVHHGQATQQMF--YNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYN--FN 226
D+DVH G TQ+ + V SIHRYE+G FWPN+ ++ GI Y N
Sbjct: 171 DYDVHAGNGTQECVEQMGEGNVQLISIHRYENGHFWPNMPQT-------GIYHNYKNTIN 223
Query: 227 IPLNKTHMKDADYMAVFHQVLLPMV 251
+PLN + DADY A+F ++LP +
Sbjct: 224 LPLNTIGLTDADYHALFTHIILPTI 248
Score = 172 (65.6 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 39/113 (34%), Positives = 66/113 (58%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G++D +Y A F +ILP + F P+L+LVS+G+DA + DP G +V+P +A L
Sbjct: 230 GLTDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRML-- 287
Query: 419 LAQGRIILAL-EGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSI 470
+ G + AL EGGY + +++ +ALLG+ +P + + I+S+ +I
Sbjct: 288 IDTGIPVAALLEGGYFLDALAADSEWVLRALLGEEIPRIRVE-KIHSAIADTI 339
Score = 99 (39.9 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 19 RCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSL 78
R + I REA + EIL HT ++ + +TE T V+ E + Y+ IY++ +++ +
Sbjct: 50 RIEHIPRREAEESEILAVHTKRYVDDVKSTETMT-VEQQESFCTKYEDIYVNSATWHRAK 108
Query: 79 LSAGSTIEL 87
L+AG++I+L
Sbjct: 109 LAAGASIDL 117
Score = 63 (27.2 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 219 IGKGYNFNI--PLNKTHMKDADYMAVFHQVL---LPMVA--EGGYCLKSLAEGAALTLRA 271
+ G++ +I P + A + + ++ +P+ A EGGY L +LA + LRA
Sbjct: 258 VSSGFDASIGDPEGSMQVTPAGFATMIRMLIDTGIPVAALLEGGYFLDALAADSEWVLRA 317
Query: 272 LLDDPCP 278
LL + P
Sbjct: 318 LLGEEIP 324
Score = 41 (19.5 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 556 YATRDCY-PIQSQEFVRLCDERLDSLIAS 583
Y TR Y P Q+ D+ L+S++AS
Sbjct: 389 YETRGIYTPFTEQKVAEFKDQ-LESILAS 416
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 317 (116.6 bits), Expect = 9.0e-45, Sum P(2) = 9.0e-45
Identities = 59/148 (39%), Positives = 86/148 (58%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDN--TSVSRVLI 169
IEL + G +KNG A IRPPGHHA + G+CFFNNVA+A + +++ I
Sbjct: 584 IELSSQVAEGRLKNGFACIRPPGHHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAI 643
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
+DWDVHHG TQ F ND V+Y S+HR++ G F+P +G+ KG N+P
Sbjct: 644 IDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGT--GSVTEVGKNDAKGLTVNVPF 701
Query: 230 NKTHMKDADYMAVFHQVLLPMVAEGGYC 257
+ M+D +Y+A + V+ P++A +C
Sbjct: 702 SGDVMRDPEYLAAWRTVIEPVMAS--FC 727
Score = 232 (86.7 bits), Expect = 9.0e-45, Sum P(2) = 9.0e-45
Identities = 45/94 (47%), Positives = 65/94 (69%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AA++ VI P+ F P+ ++VSAG+DAC P LGG +V+PE + + T L
Sbjct: 706 MRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTKSLL 765
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGD 451
A G+++LALEGGY++ SIS A C +AL+G+
Sbjct: 766 NYASGKVVLALEGGYDLKSISEAAQQCVQALIGE 799
Score = 56 (24.8 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 250 MVAEGGYCLKSLAEGAALTLRALLDD 275
+ EGGY LKS++E A ++AL+ +
Sbjct: 774 LALEGGYDLKSISEAAQQCVQALIGE 799
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 396 (144.5 bits), Expect = 2.7e-44, Sum P(3) = 2.7e-44
Identities = 66/145 (45%), Positives = 101/145 (69%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDN--TSVSRVL 168
TIE + G +KN +A++RPPGHHA + G+C F+NVA+AA++ L N SV R++
Sbjct: 242 TIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIV 301
Query: 169 IVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIP 228
IVDWD+HHG TQ+ FYND RV+Y S+HR+E+G F+P + + + +GEG G+G+ NIP
Sbjct: 302 IVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIP 361
Query: 229 LNKTHMKDADYMAVFHQVLLPMVAE 253
+ M D DY+ F++++ P+++E
Sbjct: 362 WRSSGMHDGDYVYAFNKIIQPVISE 386
Score = 249 (92.7 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 42/97 (43%), Positives = 67/97 (69%)
Query: 356 KSKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHW 415
+S GM D +Y+ AF ++I P+ +F+P+L++VS+G+DA D +G C V+P Y + TH
Sbjct: 363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHT 422
Query: 416 LKALAQGRIILALEGGYNISSISYAMTLCTKALLGDP 452
LK +A+G++ + LEGGYN+ SIS + K L+G+P
Sbjct: 423 LKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEP 459
Score = 102 (41.0 bits), Expect = 2.7e-44, Sum P(3) = 2.7e-44
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 26 REATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAGSTI 85
REAT EEIL+ H+ + ++ + +TE + L++ + D+IY++ SY + LS G TI
Sbjct: 185 REATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETG-DSIYVNNDSYLSAKLSCGGTI 243
Query: 86 E 86
E
Sbjct: 244 E 244
Score = 63 (27.2 bits), Expect = 2.7e-44, Sum P(3) = 2.7e-44
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 248 LPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSERPKIWKE 295
L ++ EGGY L S+++ A + L+ +P N TL +E ++ E
Sbjct: 431 LAVILEGGYNLDSISKSALAVAKVLVGEPPENTITLRPQAEAIEVVDE 478
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 396 (144.5 bits), Expect = 2.7e-44, Sum P(3) = 2.7e-44
Identities = 66/145 (45%), Positives = 101/145 (69%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDN--TSVSRVL 168
TIE + G +KN +A++RPPGHHA + G+C F+NVA+AA++ L N SV R++
Sbjct: 242 TIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIV 301
Query: 169 IVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIP 228
IVDWD+HHG TQ+ FYND RV+Y S+HR+E+G F+P + + + +GEG G+G+ NIP
Sbjct: 302 IVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIP 361
Query: 229 LNKTHMKDADYMAVFHQVLLPMVAE 253
+ M D DY+ F++++ P+++E
Sbjct: 362 WRSSGMHDGDYVYAFNKIIQPVISE 386
Score = 249 (92.7 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 42/97 (43%), Positives = 67/97 (69%)
Query: 356 KSKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHW 415
+S GM D +Y+ AF ++I P+ +F+P+L++VS+G+DA D +G C V+P Y + TH
Sbjct: 363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHT 422
Query: 416 LKALAQGRIILALEGGYNISSISYAMTLCTKALLGDP 452
LK +A+G++ + LEGGYN+ SIS + K L+G+P
Sbjct: 423 LKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEP 459
Score = 102 (41.0 bits), Expect = 2.7e-44, Sum P(3) = 2.7e-44
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 26 REATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAGSTI 85
REAT EEIL+ H+ + ++ + +TE + L++ + D+IY++ SY + LS G TI
Sbjct: 185 REATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETG-DSIYVNNDSYLSAKLSCGGTI 243
Query: 86 E 86
E
Sbjct: 244 E 244
Score = 63 (27.2 bits), Expect = 2.7e-44, Sum P(3) = 2.7e-44
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 248 LPMVAEGGYCLKSLAEGAALTLRALLDDPCPNFETLGTPSERPKIWKE 295
L ++ EGGY L S+++ A + L+ +P N TL +E ++ E
Sbjct: 431 LAVILEGGYNLDSISKSALAVAKVLVGEPPENTITLRPQAEAIEVVDE 478
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 348 (127.6 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 65/155 (41%), Positives = 96/155 (61%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS--RVLI 169
IE + ++KN +AVIRPPGHHA + G+C FNNV++AA+ +S +++I
Sbjct: 244 IETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMI 303
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
+DWDVHHG Q+ FY+D V+Y S+H Y++G+F+P ++ + D G G G+G N NIP
Sbjct: 304 LDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPW 363
Query: 230 NKTHMKDADYMAVFHQVLLPMVAEGGYCLKSLAEG 264
M D DY+ FHQV++P+ E L +A G
Sbjct: 364 PSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASG 398
Score = 288 (106.4 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 357 SKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWL 416
S+GM D +YI AF QV++PIA +F+P+LV++++G+DA D LGGC V+P YAH TH L
Sbjct: 365 SQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACYAHMTHML 424
Query: 417 KALAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIK 471
LAQG++ + LEGGYN SIS + TK L+G+P L + +A+++I+
Sbjct: 425 MTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLSFTCP-SEAAISTIR 478
Score = 90 (36.7 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 16 LVQR-CKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
LV R K I R AT+EEI HT + +T+ +D + L L D+IY + ++
Sbjct: 175 LVARPLKRIHARNATEEEISLVHTAAHYAFVESTKDMSD-EELIALEHTRDSIYFNNLTF 233
Query: 75 KLSLLSAGSTIE 86
SLLS G IE
Sbjct: 234 ASSLLSVGGAIE 245
Score = 45 (20.9 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 519 YWNCYKFQDISTEGAHSSPLH-IPRAEFKYEGNPKQEIYATRDCY 562
YW C + I EG + LH I RA Y+ + Y Y
Sbjct: 487 YWKCMYPKAIKNEGVWTDRLHDIIRA---YQAKQLYDNYKLTSLY 528
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 254 (94.5 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 56/138 (40%), Positives = 76/138 (55%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+E VD + GE+++ + RPPGHHA+ G+C FNNVAL A HAL+ + RV +VD
Sbjct: 100 LEGVDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVD 159
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
+DVHHG Q + ND RV Y S H+ H +P +S D + I NIPL
Sbjct: 160 FDVHHGNGIQHVCLNDPRVTYISTHQIHH---FPFTGDSCEDGPFQNI-----LNIPL-P 210
Query: 232 THMKDADYMAVFHQVLLP 249
D+ Y VF Q++ P
Sbjct: 211 AGCGDSHYQKVFDQLICP 228
Score = 151 (58.2 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D Y F Q+I P + +PEL+LV AGYDA D +G +S + +A T LK
Sbjct: 212 GCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKK 271
Query: 419 LAQ----GRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
A G+++ +LEGGY+ ++ ++ LL + LP
Sbjct: 272 TADEVCGGKMVFSLEGGYHYLGLAESVGASLAVLLDEALP 311
Score = 60 (26.2 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 253 EGGYCLKSLAEGAALTLRALLDD--PCPNFETLGTPSERPKI 292
EGGY LAE +L LLD+ P PN + ++ P I
Sbjct: 286 EGGYHYLGLAESVGASLAVLLDEALPPPNTKAPEETADTPDI 327
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 254 (94.5 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 56/138 (40%), Positives = 76/138 (55%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+E VD + GE+++ + RPPGHHA+ G+C FNNVAL A HAL+ + RV +VD
Sbjct: 100 LEGVDKVLSGELESAFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVD 159
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
+DVHHG Q + ND RV Y S H+ H +P +S D + I NIPL
Sbjct: 160 FDVHHGNGIQHVCLNDPRVTYISTHQIHH---FPFTGDSCEDGPFQNI-----LNIPL-P 210
Query: 232 THMKDADYMAVFHQVLLP 249
D+ Y VF Q++ P
Sbjct: 211 AGCGDSHYQKVFDQLICP 228
Score = 151 (58.2 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D Y F Q+I P + +PEL+LV AGYDA D +G +S + +A T LK
Sbjct: 212 GCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKK 271
Query: 419 LAQ----GRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
A G+++ +LEGGY+ ++ ++ LL + LP
Sbjct: 272 TADEVCGGKMVFSLEGGYHYLGLAESVGASLAVLLDEALP 311
Score = 60 (26.2 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 253 EGGYCLKSLAEGAALTLRALLDD--PCPNFETLGTPSERPKI 292
EGGY LAE +L LLD+ P PN + ++ P I
Sbjct: 286 EGGYHYLGLAESVGASLAVLLDEALPPPNTKAPEETADTPDI 327
>UNIPROTKB|E7EPS2 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00465375
ProteinModelPortal:E7EPS2 SMR:E7EPS2 Ensembl:ENST00000426196
ArrayExpress:E7EPS2 Bgee:E7EPS2 Uniprot:E7EPS2
Length = 269
Score = 243 (90.6 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 46/78 (58%), Positives = 55/78 (70%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
+ LVD + EI+NGMA+IRPPGHHA S GYC FN+VA+AA++A + RVLIVD
Sbjct: 192 LRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 251
Query: 172 WDVHHGQATQQMFYNDNR 189
WDVHHGQ TQ F D R
Sbjct: 252 WDVHHGQGTQFTFDQDPR 269
Score = 151 (58.2 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 7 IKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
IK+ + GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD+
Sbjct: 115 IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRVLADTYDS 173
Query: 67 IYIHPSSYKLSLLSAGSTIEL 87
+Y+HP+SY + L++GS + L
Sbjct: 174 VYLHPNSYSCACLASGSVLRL 194
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 374 (136.7 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 90/240 (37%), Positives = 127/240 (52%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHP 71
+E GL+ +C+ IQ R+A+ EEI H+ E LL G+ +D ++L +
Sbjct: 669 QETGLLNKCERIQGRKASLEEIQLVHS-EHHSLLY---GTNPLDG-QKLDPR---TLLGD 720
Query: 72 SSYKL-SLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVI 130
SS K S L G L + IEL + GE+KNG AV+
Sbjct: 721 SSQKFFSSLPCGG---LGVDSDTIWNELHSSGAARMAVGCVIELASRVASGELKNGFAVV 777
Query: 131 RPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRV 190
RPPGHHA +S G+CFFN+VA+ A++ D ++S++LIVD DVHHG TQQ FY D +
Sbjct: 778 RPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPNI 837
Query: 191 VYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADYMAVFHQVL 247
+Y S+HRY+ G F+P + +G G+G+GYN NI M D +Y+ F VL
Sbjct: 838 LYISLHRYDEGNFFPG--SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAFRLVL 895
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 349 (127.9 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 73/183 (39%), Positives = 105/183 (57%)
Query: 40 EQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAGSTI---ELRR---NQKR 93
EQ++ E V A E S + + +H S + L + T+ EL+R N
Sbjct: 38 EQLQCYHLVERCVPVPARE--GSEEEILLVHSSEH-LEAAKSTQTMNEEELKRISGNYDS 94
Query: 94 NGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVAL 153
++LVD++ G++ NGMA++RPPGHH+ ++ G+C FNNVA+
Sbjct: 95 FFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAI 154
Query: 154 AAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYD 213
AA++A + R+LIVDWDVHHGQ TQ +F D V+YFS HRYEH FWP+L+ES+YD
Sbjct: 155 AAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSWHRYEHQEFWPSLKESDYD 214
Query: 214 HIG 216
+G
Sbjct: 215 AVG 217
Score = 132 (51.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/72 (33%), Positives = 47/72 (65%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYK 75
LV+RC + RE ++EEIL H+ E +E +T+ + + L+++S +YD+ + HP++Y
Sbjct: 45 LVERCVPVPAREGSEEEILLVHSSEHLEAAKSTQTMNE-EELKRISGNYDSFFFHPNTYH 103
Query: 76 LSLLSAGSTIEL 87
+ L+ G+ ++L
Sbjct: 104 CARLAVGAALQL 115
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 514 YEHRPYWNCYKFQDISTEG 532
YEH+ +W K D G
Sbjct: 199 YEHQEFWPSLKESDYDAVG 217
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 231 (86.4 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 61/204 (29%), Positives = 89/204 (43%)
Query: 26 REATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAGSTI 85
R A E +L H +E ++L T L++ D + IHP+ Y + A
Sbjct: 23 RVARLEHVL--HALEPLDLRRVTA---------PLAAEDDLLRIHPAGYVADIRDARPDE 71
Query: 86 ELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGY 145
+ + VD + GE +N IRPPGHHA + G+
Sbjct: 72 GFAQIDGDTFLSPGSVDAAFRAAGAVVRAVDMVLGGEAQNAFCAIRPPGHHAERETAMGF 131
Query: 146 CFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWP 205
C F N ALAA+HALD+ + RV +VD+DVHHG TQ + +++ R + + + WP
Sbjct: 132 CLFGNAALAAKHALDHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQQMP---LWP 188
Query: 206 NLRESEYDHIGEGIGKGYNFNIPL 229
+ D G G NIPL
Sbjct: 189 GSGRPDED----G-AHGQIVNIPL 207
Score = 139 (54.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G E AA+ P F PEL+++SAG+DA +DPL S +A T L A
Sbjct: 210 GTGGAEMRAAYMAQAFPRLRAFKPELIIISAGFDAHQDDPLANLNWSTADFAWLTAELCA 269
Query: 419 LAQ----GRIILALEGGYNISSISYA 440
LAQ GRI+ LEGGY++++++ A
Sbjct: 270 LAQELCQGRIVSTLEGGYDLNALAAA 295
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 228 (85.3 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 50/137 (36%), Positives = 69/137 (50%)
Query: 115 VDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDV 174
VD + +N +RPPGHHA G+C FNN+A+AA HAL N + R+ IVD+DV
Sbjct: 104 VDEVIGKRARNAFCAVRPPGHHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDV 163
Query: 175 HHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHM 234
HHG TQ F + +V+Y S H+Y ++P +E +G + NIPL
Sbjct: 164 HHGNGTQAAFRRNPQVLYVSTHQYP---WYPGTGSAEETGVGNLV------NIPL-PAGT 213
Query: 235 KDADYMAVFHQVLLPMV 251
A Y LP +
Sbjct: 214 DSAAYREAVTATALPAI 230
Score = 137 (53.3 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 35/95 (36%), Positives = 48/95 (50%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G Y A LP +F PELVL+SAG+DA +DPL ++ + Y T L
Sbjct: 212 GTDSAAYREAVTATALPAIDRFRPELVLISAGFDAHRDDPLADLALTEDDYGWITAELMK 271
Query: 419 LAQ----GRIILALEGGYNISSISYAMTLCTKALL 449
LA GRI+ ALEGGY + ++ + + LL
Sbjct: 272 LADRHSGGRIVSALEGGYALEALGRSAAAHLRTLL 306
Score = 56 (24.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 253 EGGYCLKSLAEGAALTLRALL 273
EGGY L++L AA LR LL
Sbjct: 286 EGGYALEALGRSAAAHLRTLL 306
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 227 (85.0 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 47/124 (37%), Positives = 69/124 (55%)
Query: 126 GMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
G A+IRPPGHHA+ G+C F NVA+AA+HA + R+ I+D+DVHHG T F
Sbjct: 192 GFALIRPPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFT 251
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
D + + S H + G++ P + IG+G G+G N+PL D VF +
Sbjct: 252 EDPDIFFLSTH--QDGSY-PGT--GKISDIGKGKGEGTTLNLPL-PGGSGDIAMRTVFEE 305
Query: 246 VLLP 249
+++P
Sbjct: 306 IIVP 309
Score = 175 (66.7 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 41/107 (38%), Positives = 61/107 (57%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D F+++I+P A +F P+++LVSAGYDA V DPL + + Y +K
Sbjct: 293 GSGDIAMRTVFEEIIVPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKR 352
Query: 419 LAQ----GRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLD 461
LA+ GR + LEGGYN+ S+S ++ +ALLG+ L S+ D
Sbjct: 353 LAKEVCGGRCVFFLEGGYNLESLSSSVADSFRALLGEDS--LASEFD 397
Score = 54 (24.1 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 253 EGGYCLKSLAEGAALTLRALLDD 275
EGGY L+SL+ A + RALL +
Sbjct: 367 EGGYNLESLSSSVADSFRALLGE 389
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 316 (116.3 bits), Expect = 9.7e-28, P = 9.7e-28
Identities = 57/124 (45%), Positives = 81/124 (65%)
Query: 123 IKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQ 182
++NG AV+RPPGHHA +S G+CFFN+VA+ A++ D ++S++LIVD DVHHG TQQ
Sbjct: 1 LQNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQ 60
Query: 183 MFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN---KTHMKDADY 239
FY D ++Y S+HRY+ G F+P + +G G+G+GYN NI M D +Y
Sbjct: 61 AFYADPSILYISLHRYDEGNFFPG--SGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEY 118
Query: 240 MAVF 243
+ F
Sbjct: 119 LEAF 122
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 211 (79.3 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 47/139 (33%), Positives = 70/139 (50%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
I +D + G +N + RPPGHHA+ G+C N AL +H ++R+ +VD
Sbjct: 124 IVAMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVD 183
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIG-EGIGKGYNFNIPLN 230
WDVHHG T+ +F +D V+ S+H+ NL + IG +G G N N+PL
Sbjct: 184 WDVHHGNGTEAVFLDDPGVLTISLHQ-------DNLFPLDSGGIGVKGAGNS-NINVPLP 235
Query: 231 KTHMKDADYMAVFHQVLLP 249
A Y F Q+++P
Sbjct: 236 PGSGSGA-YREAFEQIVIP 253
Score = 159 (61.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 38/102 (37%), Positives = 53/102 (51%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G Y AF+Q+++P F PEL+++ GYDA DPLG C +S E + T +
Sbjct: 237 GSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLGVCMLSSEDFRWMTRQVMT 296
Query: 419 LA----QGRIILALEGGYNISSISYAMTLCTKALLG--DPLP 454
LA QGRI++ EGGY+ + Y + L G D LP
Sbjct: 297 LADKHCQGRIVVTHEGGYSPVYVPYCGLAVLEELSGASDTLP 338
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 211 (79.3 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 47/139 (33%), Positives = 70/139 (50%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
I +D + G +N + RPPGHHA+ G+C N AL +H ++R+ +VD
Sbjct: 124 IVAMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLANAALGIRHVQKTYGLTRIAVVD 183
Query: 172 WDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIG-EGIGKGYNFNIPLN 230
WDVHHG T+ +F +D V+ S+H+ NL + IG +G G N N+PL
Sbjct: 184 WDVHHGNGTEAVFLDDPGVLTISLHQ-------DNLFPLDSGGIGVKGAGNS-NINVPLP 235
Query: 231 KTHMKDADYMAVFHQVLLP 249
A Y F Q+++P
Sbjct: 236 PGSGSGA-YREAFEQIVIP 253
Score = 159 (61.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 38/102 (37%), Positives = 53/102 (51%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G Y AF+Q+++P F PEL+++ GYDA DPLG C +S E + T +
Sbjct: 237 GSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLGVCMLSSEDFRWMTRQVMT 296
Query: 419 LA----QGRIILALEGGYNISSISYAMTLCTKALLG--DPLP 454
LA QGRI++ EGGY+ + Y + L G D LP
Sbjct: 297 LADKHCQGRIVVTHEGGYSPVYVPYCGLAVLEELSGASDTLP 338
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 247 (92.0 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 52/144 (36%), Positives = 80/144 (55%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYC--GYCFFNNVALAAQHALDNTSVSRVLI 169
IEL + I GE+KNG A++RPPGHHA ++ Y G+C NNVA+ + V ++ I
Sbjct: 84 IELAERILAGEVKNGFALVRPPGHHATRTVYGNRGFCNINNVAITVDYLRWVKGVKKIAI 143
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
+D DVHHG TQ +FY+D V++ S+H+ + T +P D G G N+PL
Sbjct: 144 IDTDVHHGDGTQDIFYHDPDVLFISLHQ-DGRTLYPGT--GFIDEAGTPNAYGTTINLPL 200
Query: 230 NKTHMKDADYMAVFHQVLLPMVAE 253
D + + + + +LP++ E
Sbjct: 201 -PPGSGDEEILYLLEEAVLPILEE 223
Score = 122 (48.0 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D E + ++ +LPI +F PE ++ SAG D +DPL V+ Y T +K
Sbjct: 203 GSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTARGYGRITELIKP 262
Query: 419 LAQGRIILALEGGYNIS-SISYAMTLCTKALLGD 451
+ LEGGY+I ++ Y AL G+
Sbjct: 263 -----DLAVLEGGYSIEGALPYVNLAILLALYGE 291
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 269 (99.8 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 58/150 (38%), Positives = 90/150 (60%)
Query: 111 TIELVDNI--CRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVL 168
T+ + +I C G+I A++RPPGHH+ ++ GYCF NN ALA + AL++ S SRV
Sbjct: 120 TLSAMQHILDCHGKI--AYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVA 177
Query: 169 IVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNL--RESEYDHIGEGIGKGYNFN 226
++D DVH+G T + FY ++V+ S+H HG+ W + ++ D +GE +G GYN N
Sbjct: 178 VIDIDVHYGNGTAEGFYTSDKVLTVSLHM-NHGS-WGSSHPQKGSIDELGEDVGLGYNLN 235
Query: 227 IPL-NKTHMKDADYMAVFHQVLLPMVAEGG 255
+PL N T D Y +++++P V G
Sbjct: 236 VPLPNGTG--DRGYEYAMNELVVPAVRRFG 263
Score = 128 (50.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 338 DVPLLFLLQIPGCYPHRTKSKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVND 397
DV L + L +P P+ T +G EY A ++++P +F P++V++ G D+ D
Sbjct: 227 DVGLGYNLNVP--LPNGTGDRGY---EY--AMNELVVPAVRRFGPDMVVLVVGQDSSAFD 279
Query: 398 PLGGCKVSPEAYAHFTHWLKALAQ----GRIILALEGGYNISSISYAMTLCTKALLGDPL 453
P G ++ Y ++ +A+ GR+++ EGGY+++ +Y + + +L P
Sbjct: 280 PNGRQSLTMNGYRRIGQIMRGVAEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPE 339
Query: 454 PLLESDL------DINS-SAVTSIK 471
P L + + N+ +AV SIK
Sbjct: 340 PHLSDPIAYYPEEEANAVAAVESIK 364
Score = 54 (24.1 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 28 ATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLSAGSTI 85
A E+L HT E IE L + S + + ++ P S++ +LL+AG+T+
Sbjct: 70 AIVSELLMFHTSEYIEKLVEADKSGERCEIAA------GTFMSPGSWEAALLAAGTTL 121
Score = 44 (20.5 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 16/40 (40%), Positives = 18/40 (45%)
Query: 244 HQVLLPMVAEGGY-------CLKSLAEGAALTLRALLDDP 276
H LL MV EGGY CL ++ EG L DP
Sbjct: 307 HGRLL-MVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDP 345
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 228 (85.3 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 57/190 (30%), Positives = 89/190 (46%)
Query: 65 DAIYIHPSSY--KLSLLSAGSTIELRRNQKRNGXXXXXXXXXXXXXXXTIELVDNICRGE 122
D + +HP SY + LS EL R I+ V+ + +G
Sbjct: 73 DVLRVHPRSYIDEFRRLSDSGGGELGL---RTPFGPGAFEIAMLSAGLVIDAVEGVVQGR 129
Query: 123 IKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQ 182
+N A+ RPPGHH + G+C N+A+A + A + +V ++DWDVHHG T+
Sbjct: 130 YRNAYALSRPPGHHCLPDWPNGFCLLANIAIAIEAAKAKGLLGKVAVLDWDVHHGNGTEA 189
Query: 183 MFYNDNRVVYFSIHR---YEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADY 239
++Y + V+ SIH+ Y H T D G+G G G+N NIPL +A Y
Sbjct: 190 IYYERDDVLTISIHQDRCYPHDT-------GSIDDQGKGAGLGFNMNIPLPPGCGHNA-Y 241
Query: 240 MAVFHQVLLP 249
+ ++++P
Sbjct: 242 VEATERLIIP 251
Score = 117 (46.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G Y+ A +++I+P F+ +LV+++ G+DA DPL S E + T +
Sbjct: 235 GCGHNAYVEATERLIIPKLKAFDADLVIIACGFDAGGFDPLARMMCSAETFREMTRRVMQ 294
Query: 419 LAQGRIILALEGGYN 433
++ G+++ A EGGY+
Sbjct: 295 VSDGKLVAAHEGGYS 309
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 216 (81.1 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 44/115 (38%), Positives = 61/115 (53%)
Query: 115 VDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDV 174
V ++ G N A+ RPPGHHAM+ G+C N+A+A + A ++RV ++DWDV
Sbjct: 99 VFDVVDGTFDNAYALSRPPGHHAMRDGSMGFCLLANIAIAIEAARAERGLTRVAVLDWDV 158
Query: 175 HHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
HHG TQ +FY V+ SIH + F P G G G+G N N+ L
Sbjct: 159 HHGNGTQDIFYEREDVLTISIH--QENCFPPG--SGSGSERGAGAGEGANLNVNL 209
Score = 112 (44.5 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
Identities = 28/96 (29%), Positives = 43/96 (44%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G YI A ++LP + F PEL++V+ G DA DPL + + T +
Sbjct: 212 GAGHQSYIDAMDILVLPALHAFRPELIIVACGLDANNFDPLSRMTAHSGTFGYLTRAVMG 271
Query: 419 LAQ----GRIILALEGGYNISSISYAMTLCTKALLG 450
A GR++ A EGGY + + + + L G
Sbjct: 272 AANDLCGGRLVCAHEGGYAEAVVPFCAHEVVRTLAG 307
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 182 (69.1 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++ VD + G + RPPGHHA + G+CFFNNVA+AA +A + RV IVD
Sbjct: 104 VDAVDLVMEGTLGAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVD 163
Query: 172 WDVHHGQATQQMFYN 186
+DVHHG T+ + N
Sbjct: 164 FDVHHGNGTEDIITN 178
Score = 134 (52.2 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 374 LPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ----GRIILALE 429
LP ++F PEL+L+SAG+DA + D + ++ Y T LK +A+ GRI+ LE
Sbjct: 236 LPALHKFKPELILISAGFDAHIEDEMSHVSLTEADYRWITDELKIIAEEYGKGRIVSVLE 295
Query: 430 GGYNISSISYAMTLCTKALLGD 451
GGY S++ ++ L+G+
Sbjct: 296 GGYAPSALGRSVVAHVNGLIGN 317
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 182 (69.1 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 112 IELVDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVD 171
++ VD + G + RPPGHHA + G+CFFNNVA+AA +A + RV IVD
Sbjct: 104 VDAVDLVMEGTLGAAFCATRPPGHHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVD 163
Query: 172 WDVHHGQATQQMFYN 186
+DVHHG T+ + N
Sbjct: 164 FDVHHGNGTEDIITN 178
Score = 134 (52.2 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 374 LPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ----GRIILALE 429
LP ++F PEL+L+SAG+DA + D + ++ Y T LK +A+ GRI+ LE
Sbjct: 236 LPALHKFKPELILISAGFDAHIEDEMSHVSLTEADYRWITDELKIIAEEYGKGRIVSVLE 295
Query: 430 GGYNISSISYAMTLCTKALLGD 451
GGY S++ ++ L+G+
Sbjct: 296 GGYAPSALGRSVVAHVNGLIGN 317
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 224 (83.9 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 47/121 (38%), Positives = 69/121 (57%)
Query: 128 AVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYND 187
A+ RPPGHHA G+C+ NN A+AAQ D +RV ++D D+HHGQ Q++FY
Sbjct: 149 ALCRPPGHHARSEAAGGFCYLNNAAIAAQVLRDK--YARVAVLDTDMHHGQGIQEIFYER 206
Query: 188 NRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTH-MKDADYMAVFHQV 246
V+Y S+H + F+P + + G G G+GYN N+P+ H + D++A Q
Sbjct: 207 ADVLYVSVHG-DPTNFYPGVAGFAEER-GAGAGEGYNLNLPM--AHGASEGDFLARLEQA 262
Query: 247 L 247
L
Sbjct: 263 L 263
Score = 84 (34.6 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G S+ +++A +Q + + F+ E++++S G+D DP V+ + +A +++
Sbjct: 249 GASEGDFLARLEQALEAVK-AFDAEVLVLSLGFDIYELDPQSKVAVTRDGFAILGQRIRS 307
Query: 419 LAQGRIILALEGGYNISSI 437
L +I+ EGGY++ S+
Sbjct: 308 LGLPCLIVQ-EGGYHLESL 325
Score = 43 (20.2 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 250 MVAEGGYCLKSLAEGA 265
+V EGGY L+SL + A
Sbjct: 314 IVQEGGYHLESLEDNA 329
Score = 41 (19.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 547 YEGNPKQEIYATRDCYPIQSQ 567
YE +P+ ++ TRD + I Q
Sbjct: 283 YELDPQSKVAVTRDGFAILGQ 303
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 223 (83.6 bits), Expect = 7.5e-20, Sum P(2) = 7.5e-20
Identities = 50/114 (43%), Positives = 64/114 (56%)
Query: 120 RGEIKNG----MAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVH 175
+ I+NG A+ RPPGHHA GYC+ NN A+AAQ LD +V I+D D H
Sbjct: 139 QAHIQNGAHSAFALCRPPGHHAAGDLMGGYCYLNNAAIAAQAFLDQGH-RKVAILDVDYH 197
Query: 176 HGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
HG TQ +FY + V++ SIH + F P D GEG G+G+NFN PL
Sbjct: 198 HGNGTQSIFYERSDVLFTSIHGHPEAEF-PFFL-GYADECGEGAGEGFNFNYPL 249
Score = 74 (31.1 bits), Expect = 7.5e-20, Sum P(2) = 7.5e-20
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 367 AAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGRIIL 426
AA +Q I +++ ++++VS G D +DP+ K+ Y + AL + + +
Sbjct: 260 AALEQACNEIQ-RYDADIIVVSLGVDTFKDDPISQFKLDSPDYLAMGKRIAALGKPTLFV 318
Query: 427 ALEGGYNISSI 437
+EGGY + I
Sbjct: 319 -MEGGYAVEEI 328
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 188 (71.2 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 46/121 (38%), Positives = 65/121 (53%)
Query: 129 VIRPPG--HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYN 186
VI PG HHA KSE G+C+ N++ L L RVL +D D+HHG Q+ F N
Sbjct: 153 VINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHK--RVLYIDIDIHHGDGVQEAFNN 210
Query: 187 DNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQV 246
+RV+ S HR+ G ++P S D G G GK + N+PL ++D Y+ +F V
Sbjct: 211 SDRVMTVSFHRF--GQYFPG-SGSIMDK-GVGPGKYFAINVPLMAA-IRDEPYLKLFESV 265
Query: 247 L 247
+
Sbjct: 266 I 266
Score = 121 (47.7 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 421
D Y+ F+ VI + FNPE +++ G D+ D LG +S A+A ++K+L +
Sbjct: 255 DEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGK 314
Query: 422 GRIILALEGGYNISSISYAMTLCTKALLG 450
++L GGY + +++ L T +LG
Sbjct: 315 PLMVLG-GGGYTLRNVARCWALETGVILG 342
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 194 (73.4 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 41/117 (35%), Positives = 64/117 (54%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA + E G+C+ N++ LA + L RVL +D D+HHG QQ FY +RV+ S
Sbjct: 157 HHAKRGEASGFCYVNDIVLAILNML--RFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVS 214
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y +G F+P +D G GK + N+PL + + D Y ++F ++ P +
Sbjct: 215 FHKY-NGDFFP--ATGNFDENGVKGGKYFALNVPL-EDGIGDEQYTSLFKSIIEPTI 267
Score = 94 (38.1 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 21/96 (21%), Positives = 45/96 (46%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + F+ +I P F P +++ G D+ D LG +S A+ + ++
Sbjct: 249 GIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRS 308
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
+++ GGY + +++ A T + + +P
Sbjct: 309 FNIPMLVVG-GGGYTLRNVARAWCYETSICVNEQIP 343
Score = 55 (24.4 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALEQLSSHYDAIYIHP 71
GL + PR AT E+ + H + ++ L T + + D +Q + D +
Sbjct: 63 GLHNKMSVFSPRMATFGEMSEFHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCP-VFD 121
Query: 72 SSYKLSLLSAGSTIELRR 89
+Y+ S SAG++++ R
Sbjct: 122 GTYEFSQRSAGASLDASR 139
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 179 (68.1 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 45/120 (37%), Positives = 64/120 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA +++ G+ + N+ +A L+ RV +D D HHG Q+ FY+ +RV+ S
Sbjct: 134 HHAHRAKASGFSYLNDAVVAINLLLEKGL--RVAYLDIDAHHGDGVQEAFYDTDRVLTIS 191
Query: 195 IHRYEHGT-FWPNLR-ESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVA 252
IH E G F+P E E G G G GY+ NIPL H DA +M F +V P++A
Sbjct: 192 IH--ESGMYFFPGTGFEGE---TGTGAGTGYSVNIPL-VAHADDALFMKAFDEVAFPLLA 245
Score = 122 (48.0 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 421
D ++ AF +V P+ +NP++++ G D DPL +V+ +Y + LKAL
Sbjct: 229 DALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGI 288
Query: 422 GRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
+ + GGYN+ +++ A TL + G LP
Sbjct: 289 PWVAVG-GGGYNLVNVARAWTLAWGVMNGVELP 320
Score = 40 (19.1 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 25 PREATQEEILKKHTIEQIELLATTEGSTDV--DALEQLSSHYDAIYIHPSSYKLSLLSAG 82
PR A +E +L H + ++ L S D D L + ++ Y + L AG
Sbjct: 53 PR-AAEEALLTFHAPDYLDRLREFSESDDARADFRYGLGDLDNPVF--RGLYDWARLGAG 109
Query: 83 STIELRR 89
TIE R
Sbjct: 110 GTIEAAR 116
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 179 (68.1 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 45/120 (37%), Positives = 64/120 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA +++ G+ + N+ +A L+ RV +D D HHG Q+ FY+ +RV+ S
Sbjct: 134 HHAHRAKASGFSYLNDAVVAINLLLEKGL--RVAYLDIDAHHGDGVQEAFYDTDRVLTIS 191
Query: 195 IHRYEHGT-FWPNLR-ESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVA 252
IH E G F+P E E G G G GY+ NIPL H DA +M F +V P++A
Sbjct: 192 IH--ESGMYFFPGTGFEGE---TGTGAGTGYSVNIPL-VAHADDALFMKAFDEVAFPLLA 245
Score = 122 (48.0 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 421
D ++ AF +V P+ +NP++++ G D DPL +V+ +Y + LKAL
Sbjct: 229 DALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGI 288
Query: 422 GRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
+ + GGYN+ +++ A TL + G LP
Sbjct: 289 PWVAVG-GGGYNLVNVARAWTLAWGVMNGVELP 320
Score = 40 (19.1 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 25 PREATQEEILKKHTIEQIELLATTEGSTDV--DALEQLSSHYDAIYIHPSSYKLSLLSAG 82
PR A +E +L H + ++ L S D D L + ++ Y + L AG
Sbjct: 53 PR-AAEEALLTFHAPDYLDRLREFSESDDARADFRYGLGDLDNPVF--RGLYDWARLGAG 109
Query: 83 STIELRR 89
TIE R
Sbjct: 110 GTIEAAR 116
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 188 (71.2 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 49/144 (34%), Positives = 73/144 (50%)
Query: 115 VDNICRGEIKNGMAVIRPPGHHAMK------SEYCGYCFFNNVALAAQHALDNTSVSRVL 168
VD++ R IRPPGHHA + + GYC NNVA+ A++A SR+
Sbjct: 1192 VDSVSRSGYTRAFCAIRPPGHHAGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIA 1251
Query: 169 IVDWDVHHGQATQQMFYNDNRVVYFSIHRY-EHGTFWPNLRESEYDHIGEGIGK--GYNF 225
+VD+DVHHG TQ++ D+ ++ SIH E F+P + D I E G+ G
Sbjct: 1252 VVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGD-IDEVSGQFDGNIL 1310
Query: 226 NIPLNKTHMKDADYMAVFHQVLLP 249
NI L K + A ++ + ++P
Sbjct: 1311 NIGL-KRNTGSAVFLQQWMNKIIP 1333
Score = 131 (51.2 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 365 YIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA---- 420
++ + I+P + P+L+ +SAG+D +DP G K++ E Y T +K +A
Sbjct: 1323 FLQQWMNKIIPRLEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFVITKMIKTVAFKYC 1382
Query: 421 QGRIILALEGGYNI---SSISYAMTLCTKALLGD 451
+GRII LEGGY I +S+ + KAL+ D
Sbjct: 1383 KGRIISVLEGGYGIEKTNSLQRCVNSHLKALIED 1416
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 193 (73.0 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 34/101 (33%), Positives = 58/101 (57%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPGHHAMKSEYC------GYCFFNNVALAAQHALDNTSV 164
T + +DN+ +G + + RPPGHHA + G+C N+V + A++A ++
Sbjct: 1207 TCQAIDNVMKGNVTSAFVAARPPGHHAGRDGLTSGTSSQGFCLLNHVCIGAKYAQLKYNL 1266
Query: 165 SRVLIVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWP 205
++ I+D+DVHHG T+++ ND + SIH +E G F+P
Sbjct: 1267 DKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG-FYP 1306
Score = 124 (48.7 bits), Expect = 6.9e-19, Sum P(2) = 6.9e-19
Identities = 33/93 (35%), Positives = 50/93 (53%)
Query: 361 SDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA 420
S ++ AF +I+ + PEL+L+S G+DA + D L + E Y T L+ +A
Sbjct: 1395 SASSFLKAFS-IIIDKLNDYQPELILISCGFDAHMEDHLASLCLLEENYVEITRSLRRVA 1453
Query: 421 ----QGRIILALEGGYNISSISYAMTLCTKALL 449
+GR++ LEGGYNI+ A+ CT A L
Sbjct: 1454 DRWCKGRLVSILEGGYNIN----ALRQCTIAHL 1482
Score = 83 (34.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/126 (21%), Positives = 47/126 (37%)
Query: 25 PREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSL------ 78
P E + IL H+ E + LL D + + L+ + D + + S
Sbjct: 1108 PEEINDKWILTVHSPEYLRLLEDLTEKLDANEIRPLNVNNDGASTGINQFSTSTPITTTG 1167
Query: 79 ---LSAGSTIELRRNQK-RNGXXXXXXXXXXXX---XXXTIELVDNICRGEIKNGMAVIR 131
++ GST ++ +G T + +DN+ +G + + R
Sbjct: 1168 TATVTPGSTTSSTNGEQCEDGDTFVSKLSLHAAKRSAGATCQAIDNVMKGNVTSAFVAAR 1227
Query: 132 PPGHHA 137
PPGHHA
Sbjct: 1228 PPGHHA 1233
Score = 42 (19.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 248 LPMVAEGGYCLKSLAEGAALTLRALLDD 275
L + EGGY + +L + L AL +D
Sbjct: 1461 LVSILEGGYNINALRQCTIAHLSALSED 1488
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 193 (73.0 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ALAA L RVL +D DVHHG ++ FY +RV+ S
Sbjct: 137 HHAKKREASGFCYVNDIALAALELLKYHQ--RVLYIDIDVHHGDGVEEFFYTTDRVMTCS 194
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H++ G ++P G G GK Y N+PL + + D Y +VF V+
Sbjct: 195 FHKF--GEYFPGT--GHIKDTGIGTGKNYAVNVPL-RDGIDDESYESVFKPVI 242
Score = 105 (42.0 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y + F+ VI I F PE V++ G D+ D LG +S + ++ ++K+
Sbjct: 228 GIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKS 287
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
I + GGY + +++ T T L G+ L
Sbjct: 288 FNLPMICVG-GGGYTVRNVARVWTYETGLLAGEEL 321
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 218 (81.8 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 43/107 (40%), Positives = 61/107 (57%)
Query: 125 NGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMF 184
+ A+ RPPGHHA + GYC+ NN A+AAQHA+ RV ++D D HHG TQ +F
Sbjct: 148 SAFALCRPPGHHAAREYMGGYCYLNNAAIAAQHAITR-GARRVAVLDVDFHHGNGTQNIF 206
Query: 185 YNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNK 231
Y+ V++ S+H + +P + G G G+G N N+PL K
Sbjct: 207 YDRGDVLFVSLHG-DPAVSYPYFSGHASER-GSGAGEGCNLNLPLPK 251
Score = 69 (29.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 22/89 (24%), Positives = 37/89 (41%)
Query: 349 GCYPHRTKSKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEA 408
GC + K S Y A + + F PEL++VS G D +DP+ + E
Sbjct: 242 GCNLNLPLPKNTSWQHYRQALELACKQLR-AFAPELLVVSLGVDTFKDDPISHFLLESED 300
Query: 409 YAHFTHWLKALAQGRIILALEGGYNISSI 437
+ + + + + +EGGY + I
Sbjct: 301 FLGMGQIIATVGTPTLFV-MEGGYMVDEI 328
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 235 (87.8 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 50/101 (49%), Positives = 70/101 (69%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLK 417
M DPEY+AAF+ V++PIA +F+P+LVLVSAG+DA P LGG VS + + + T L
Sbjct: 201 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLM 260
Query: 418 ALAQGRIILALEGGYNISSISYAMTLCTKALLGDPL-PLLE 457
LA G ++LALEGG+++++I A C ALLG+ + PL E
Sbjct: 261 NLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSE 301
Score = 174 (66.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLN-- 230
DVHHG TQQ FY D V+Y S+HR++ G F+P D +G G G+G+N N+
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPG--SGAVDEVGAGSGEGFNVNVAWAGG 196
Query: 231 -KTHMKDADYMAVFHQVLLPMVAE 253
M D +Y+A F V++P+ E
Sbjct: 197 LDPPMGDPEYLAAFRIVVMPIARE 220
Score = 52 (23.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHTIEQIELLAT 47
+E GL +C+ ++ R+A+ EE+ H+ + L T
Sbjct: 36 QERGLRSQCECLRGRKASLEELQSVHSERHVLLYGT 71
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 193 (73.0 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 40/113 (35%), Positives = 62/113 (54%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L+ L + RVL +D D+HHG ++ FY +RV+ S
Sbjct: 135 HHAKKSEASGFCYTNDIVLSILELLKHHE--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 192
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG GK Y+ N PL K + D Y ++F ++
Sbjct: 193 FHKY--GDYFPGT--GDVKDIGADKGKYYSLNFPL-KDGIDDESYQSIFRPII 240
Score = 96 (38.9 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y + F+ +I + + P V++ G D+ D LG ++ +A +LK+
Sbjct: 226 GIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKS 285
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
++L GGY I +++ T T L+ L
Sbjct: 286 FNVPLVVLG-GGGYTIKNVARCWTYETSILVDSEL 319
Score = 49 (22.3 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 15/73 (20%), Positives = 32/73 (43%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHY--DAIYIHPS 72
G+ ++ + +PR+A++ E+ H+ + I L D +QL + +
Sbjct: 41 GIYKKMQIFRPRKASELELTNFHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDG 100
Query: 73 SYKLSLLSAGSTI 85
Y +S+G +I
Sbjct: 101 MYNFCQISSGGSI 113
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 238 (88.8 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 50/135 (37%), Positives = 71/135 (52%)
Query: 115 VDNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDV 174
VD + GE N ++ RPPGHH + + G+CF N+A+A + A + +V ++DWDV
Sbjct: 127 VDAVLSGEADNAYSLSRPPGHHCTRDQAMGFCFLANIAIAIEAAKARHGLGKVAVIDWDV 186
Query: 175 HHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHM 234
HHG TQ +F V+ S+H + G F P E D G G G G N NIPL
Sbjct: 187 HHGNGTQSIFEERADVLTLSLH--QDGCFPPGYG-GEQDR-GRGAGLGCNINIPLLPGSG 242
Query: 235 KDADYMAVFHQVLLP 249
DA Y+ +++P
Sbjct: 243 HDA-YLYAMQHIVIP 256
Score = 147 (56.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 349 GCYPHRTKSKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEA 408
GC + G Y+ A Q +++P +F PEL++V+ GYDA DPL + ++
Sbjct: 230 GCNINIPLLPGSGHDAYLYAMQHIVIPALERFEPELIIVACGYDANAVDPLARMLLHSDS 289
Query: 409 YAHFTHWLK----ALAQGRIILALEGGYNISSISYAMTLCTKALLG 450
+ T LK L +GR++L EGGY+ + + + +AL G
Sbjct: 290 FREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFCGLATLEALSG 335
Score = 46 (21.3 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHY-DAIYIHPSS 73
GL ++ AT++++L+ H+ ++ + +D H D + P S
Sbjct: 61 GLTRQLHLRSAAAATEDDLLRVHSAAYLQRF---KALSDAGG-----GHLGDEAPVGPGS 112
Query: 74 YKLSLLSAG 82
Y+++ LSAG
Sbjct: 113 YEIAQLSAG 121
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 199 (75.1 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 42/118 (35%), Positives = 65/118 (55%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L + RVL +D DVHHG ++ FY +RV+ S
Sbjct: 139 HHAKKSEASGFCYSNDIVLAILELLKHHK--RVLYIDIDVHHGDGVEEAFYTTDRVMTVS 196
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVA 252
H+ HG ++P + +G G GK Y N+PL + + D Y +F ++ ++A
Sbjct: 197 FHK--HGEYFPGT--GDLKDVGAGSGKYYALNVPL-RDGVDDVTYERIFRTIMGEVMA 249
Score = 94 (38.1 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ ++ + +F PE V++ G D+ D LG ++ + ++K+
Sbjct: 230 GVDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKS 289
Query: 419 LAQGRIILALEGGYNISSIS----YAMTLCTKALLGDPLPL 455
++L GGY I ++S Y + + D LPL
Sbjct: 290 F-NVPLLLVGGGGYTIRNVSRCWLYETAIALNQEVSDDLPL 329
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 194 (73.4 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 44/113 (38%), Positives = 60/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL VD DVHHG ++ FY +RV+ S
Sbjct: 157 HHAKKSEASGFCYVNDIVLGILELL--RFKQRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 214
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P E IG G GK Y N PL + + D Y ++F V+
Sbjct: 215 FHKY--GEYFPGT--GELRDIGVGQGKYYAVNFPL-RDGIDDVSYKSIFEPVI 262
Score = 104 (41.7 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y + F+ VI + + PE V++ G D+ D LG +S +A+ ++K+
Sbjct: 248 GIDDVSYKSIFEPVIKSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKS 307
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+I+ GGY + +++ T L+GD L
Sbjct: 308 FNLPTLIVG-GGGYTMRNVARTWAFETGILVGDNL 341
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 186 (70.5 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 102 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 159
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 160 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 214
Query: 246 VL 247
++
Sbjct: 215 II 216
Score = 85 (35.0 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A +K
Sbjct: 202 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKT 261
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 262 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 296
Score = 60 (26.2 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 17 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 47
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 186 (70.5 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 102 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 159
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 160 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 214
Query: 246 VL 247
++
Sbjct: 215 II 216
Score = 85 (35.0 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A +K
Sbjct: 202 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKT 261
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 262 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 296
Score = 60 (26.2 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 17 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 47
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 186 (70.5 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 132 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 189
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 190 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 244
Query: 246 VL 247
++
Sbjct: 245 II 246
Score = 85 (35.0 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A +K
Sbjct: 232 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKT 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 292 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 60 (26.2 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 47 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 77
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 186 (70.5 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 132 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 189
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 190 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 244
Query: 246 VL 247
++
Sbjct: 245 II 246
Score = 85 (35.0 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A +K
Sbjct: 232 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKT 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 292 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 60 (26.2 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 47 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 77
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 186 (70.5 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 132 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 189
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 190 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 244
Query: 246 VL 247
++
Sbjct: 245 II 246
Score = 85 (35.0 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A +K
Sbjct: 232 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKT 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 292 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 60 (26.2 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 47 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 77
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 179 (68.1 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 38/117 (32%), Positives = 64/117 (54%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K+ G+C+ N++ L+ + L R+L +D D+HHG Q+ FY +RV S
Sbjct: 158 HHAKKNSPSGFCYVNDIVLSILNLLRYHP--RILYIDIDLHHGDGVQEAFYTTDRVFTLS 215
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y +G F+P + IG GK + N+PL + + D Y+ +F ++ P++
Sbjct: 216 FHKY-NGEFFPGT--GDLTEIGCDKGKHFALNVPL-EDGIDDDSYINLFKSIVDPLI 268
Score = 102 (41.0 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D YI F+ ++ P+ F P L++ G D+ +D LG ++ +A+ ++K+
Sbjct: 250 GIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKS 309
Query: 419 LAQGRIILALEGGY---NISSI-SYAMTLCTKALLGDPLP 454
+++ GGY N+S + +Y + LL + +P
Sbjct: 310 FGLPMLVVG-GGGYTPRNVSRLWTYETGILNDVLLPEDIP 348
Score = 48 (22.0 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 19/84 (22%), Positives = 39/84 (46%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLA--TTEGSTDVD--ALEQLSSHYDAIYIH 70
GL + + R AT++E+L+ H+ + + L+ + E + + LE + D I
Sbjct: 63 GLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENANKLPRGTLENFNIGDDCP-IF 121
Query: 71 PSSYKLSLLSAGSTIELRRNQKRN 94
+ Y + L G++++ R N
Sbjct: 122 QNLYDYTTLYTGASLDATRKLINN 145
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 186 (70.5 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 132 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 189
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 190 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 244
Query: 246 VL 247
++
Sbjct: 245 II 246
Score = 83 (34.3 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 23/96 (23%), Positives = 41/96 (42%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A K
Sbjct: 232 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKT 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 292 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 60 (26.2 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 47 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 77
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 188 (71.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 42/113 (37%), Positives = 62/113 (54%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL +D DVHHG ++ FY ++RV+ S
Sbjct: 148 HHAKKSEASGFCYTNDIVLGIIELLRYHP--RVLYIDTDVHHGDGVEEAFYTNDRVMTCS 205
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H++ G F+P IG G GK + NIPL + + DA Y ++F ++
Sbjct: 206 FHKF--GEFFPGT--GNLTDIGIGKGKYHAINIPL-RDGIDDASYKSIFEPII 253
Score = 101 (40.6 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y + F+ +I I + P +++ G D+ D LG +S +A+ +++++
Sbjct: 239 GIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRS 298
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
L ++L GGY I +++ T G+ LP
Sbjct: 299 LGVPVMVLG-GGGYTIRNVARTWAFETGVCNGEILP 333
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 188 (71.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 42/113 (37%), Positives = 62/113 (54%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL +D DVHHG ++ FY ++RV+ S
Sbjct: 148 HHAKKSEASGFCYTNDIVLGIIELLRYHP--RVLYIDTDVHHGDGVEEAFYTNDRVMTCS 205
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H++ G F+P IG G GK + NIPL + + DA Y ++F ++
Sbjct: 206 FHKF--GEFFPGT--GNLTDIGIGKGKYHAINIPL-RDGIDDASYKSIFEPII 253
Score = 101 (40.6 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y + F+ +I I + P +++ G D+ D LG +S +A+ +++++
Sbjct: 239 GIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRS 298
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
L ++L GGY I +++ T G+ LP
Sbjct: 299 LGVPVMVLG-GGGYTIRNVARTWAFETGVCNGEILP 333
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 186 (70.5 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 194 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 251
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 252 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 306
Query: 246 VL 247
++
Sbjct: 307 II 308
Score = 85 (35.0 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A +K
Sbjct: 294 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKT 353
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 354 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 388
Score = 60 (26.2 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 109 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 139
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 186 (70.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 44/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 226 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 283
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 284 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 338
Query: 246 VL 247
++
Sbjct: 339 II 340
Score = 85 (35.0 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A +K
Sbjct: 326 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKT 385
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 386 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 420
Score = 60 (26.2 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 141 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 171
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 165 (63.1 bits), Expect = 5.0e-17, Sum P(3) = 5.0e-17
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLI 169
TI + G+ K +A+ P G HHA K E G+C+ N+ L R+L
Sbjct: 119 TITAAQCLLDGKCK--VAINWPGGWHHAKKDEASGFCYLNDAVLGILRL--RQKFDRILY 174
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
+D D+HHG + F ++V+ S+H++ G F+P + IG G G+ Y+ N+P+
Sbjct: 175 IDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVTDIGLGKGRYYSVNVPI 231
Query: 230 NKTHMKDADYMAVFHQVLLPMVA 252
+ ++D Y + VL + A
Sbjct: 232 -QDGIQDEKYYQICETVLKEVYA 253
Score = 110 (43.8 bits), Expect = 5.0e-17, Sum P(3) = 5.0e-17
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + V+ + FNPE V++ G D DP+ ++PE ++
Sbjct: 234 GIQDEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAGDPMCSFNMTPEGVGKCLKYVLQ 293
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+IL GGYN+++ + T T +LG L
Sbjct: 294 WQLATLILG-GGGYNLANTARCWTYLTGVILGRTL 327
Score = 46 (21.3 bits), Expect = 5.0e-17, Sum P(3) = 5.0e-17
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTDVDALEQLSSHYD 65
L+ I+P+ A+ EE+ HT ++ L + EG D + YD
Sbjct: 50 LLDHMMIIKPKVASMEEMASFHTDAYLQHLQKVSEEGDDDHPESVEYGLGYD 101
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 211 (79.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 42/119 (35%), Positives = 68/119 (57%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ L+ + L RV+ +D D+HHG Q+ FYN +RV+ S
Sbjct: 167 HHAKKFEPSGFCYVNDIVLSIINLL--RVHPRVMYIDIDLHHGDGVQEAFYNTDRVMTVS 224
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAE 253
H+Y +G F+P D +G G GK Y N+PL + + D Y+ +F ++ P++ +
Sbjct: 225 FHKY-NGEFFPGT--GSVDEVGIGSGKNYAINVPL-RDGIDDESYIRLFKSIMEPLITK 279
Score = 67 (28.6 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELLA--TTEGSTDV--DALEQLSSHYDAIYIHP 71
L ++ PR AT++E+L+ H+ + I+ L T E + D L Q + D I
Sbjct: 73 LYEKMDLYTPRRATKDELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCP-IFD 131
Query: 72 SSYKLSLLSAGSTIELRR 89
Y S + AG++++ R
Sbjct: 132 GMYDYSAIYAGASLDATR 149
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 211 (79.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 42/119 (35%), Positives = 68/119 (57%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ L+ + L RV+ +D D+HHG Q+ FYN +RV+ S
Sbjct: 167 HHAKKFEPSGFCYVNDIVLSIINLL--RVHPRVMYIDIDLHHGDGVQEAFYNTDRVMTVS 224
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAE 253
H+Y +G F+P D +G G GK Y N+PL + + D Y+ +F ++ P++ +
Sbjct: 225 FHKY-NGEFFPGT--GSVDEVGIGSGKNYAINVPL-RDGIDDESYIRLFKSIMEPLITK 279
Score = 67 (28.6 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELLA--TTEGSTDV--DALEQLSSHYDAIYIHP 71
L ++ PR AT++E+L+ H+ + I+ L T E + D L Q + D I
Sbjct: 73 LYEKMDLYTPRRATKDELLEFHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCP-IFD 131
Query: 72 SSYKLSLLSAGSTIELRR 89
Y S + AG++++ R
Sbjct: 132 GMYDYSAIYAGASLDATR 149
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 170 (64.9 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 41/144 (28%), Positives = 74/144 (51%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLI 169
T+ VD + G++K+ + + G HH + + G+C +N+ ++A ++ + RVL
Sbjct: 108 TLTAVDAVLSGKVKHALNL--GGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLY 164
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTF-WPNLRESEYDHIGEGIGKGYNFNIP 228
+D D HHG Q FY+D V S+H E G + +P + G+G G Y+FN+P
Sbjct: 165 IDTDAHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGT--GAVNERGQGNGYSYSFNVP 220
Query: 229 LNKTHMKDADYMAVFHQVLLPMVA 252
L+ +D ++ + V+ + A
Sbjct: 221 LD-AFTEDESFLDSYRTVVKEVAA 243
Score = 77 (32.2 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA- 420
D ++ +++ V+ +A F P+++L G DA DPL + Y + +A
Sbjct: 227 DESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLAREIAN 286
Query: 421 ---QGRIILALEGGYN 433
+GR I GGY+
Sbjct: 287 EYCEGRWIAVGGGGYD 302
Score = 66 (28.3 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 20/72 (27%), Positives = 30/72 (41%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATT-EGSTDVDALEQLSSHYDAIYIHPSS 73
G + + I PR AT EEI HT E I + EG + + + P+
Sbjct: 38 GFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNM 97
Query: 74 YKLSLLSAGSTI 85
++ S L G T+
Sbjct: 98 HEASALLVGGTL 109
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 170 (64.9 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 41/144 (28%), Positives = 74/144 (51%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLI 169
T+ VD + G++K+ + + G HH + + G+C +N+ ++A ++ + RVL
Sbjct: 108 TLTAVDAVLSGKVKHALNL--GGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGL-RVLY 164
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTF-WPNLRESEYDHIGEGIGKGYNFNIP 228
+D D HHG Q FY+D V S+H E G + +P + G+G G Y+FN+P
Sbjct: 165 IDTDAHHGDGVQWSFYDDPNVCTISLH--ETGRYLFPGT--GAVNERGQGNGYSYSFNVP 220
Query: 229 LNKTHMKDADYMAVFHQVLLPMVA 252
L+ +D ++ + V+ + A
Sbjct: 221 LD-AFTEDESFLDSYRTVVKEVAA 243
Score = 77 (32.2 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA- 420
D ++ +++ V+ +A F P+++L G DA DPL + Y + +A
Sbjct: 227 DESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLAREIAN 286
Query: 421 ---QGRIILALEGGYN 433
+GR I GGY+
Sbjct: 287 EYCEGRWIAVGGGGYD 302
Score = 66 (28.3 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 20/72 (27%), Positives = 30/72 (41%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATT-EGSTDVDALEQLSSHYDAIYIHPSS 73
G + + I PR AT EEI HT E I + EG + + + P+
Sbjct: 38 GFISPSQIISPRMATDEEIAYIHTEEYINAVKRAGEGKLEKSIAMTYGLGTEDTPMFPNM 97
Query: 74 YKLSLLSAGSTI 85
++ S L G T+
Sbjct: 98 HEASALLVGGTL 109
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 184 (69.8 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ LA L RVL VD D+HHG ++ FY +RV+ S
Sbjct: 148 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGDGVEEAFYATDRVMTVS 205
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H++ G ++P IG G GK Y+ N+PL+ + D Y +F ++
Sbjct: 206 FHKF--GDYFPGT--GHIQDIGYGSGKYYSLNVPLDDG-IDDESYHLLFKPIM 253
Score = 80 (33.2 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 22/92 (23%), Positives = 42/92 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ ++ + F P V++ G D+ D LG +S + +A ++++
Sbjct: 239 GIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRS 298
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLG 450
++L GGY I +++ T LG
Sbjct: 299 FNVPLLLLG-GGGYTIRNVARCWCYETGVALG 329
Score = 54 (24.1 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQL 60
GL+Q + ++P A ++ + H + + L + T D + QL
Sbjct: 54 GLLQHMQVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQL 99
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 160 (61.4 bits), Expect = 3.5e-16, Sum P(3) = 3.5e-16
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 114 LVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
L+D +C+ +A+ G HHA K E G+C+ N+ L R+L VD
Sbjct: 126 LIDGMCK------VAINWSGGWHHAKKDEASGFCYLNDAVLGILRL--RRKFDRILYVDL 177
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG + F ++V+ S+H++ G F+P + +G G G+ Y+ N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPI-QD 233
Query: 233 HMKDADYMAVFHQVL 247
++D Y + VL
Sbjct: 234 GIQDEKYYHICESVL 248
Score = 108 (43.1 bits), Expect = 3.5e-16, Sum P(3) = 3.5e-16
Identities = 37/148 (25%), Positives = 63/148 (42%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 234 GIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 293
Query: 419 LAQGRIILALE-GGYNISSISYAMTLCTKALLGDPLPLLESDLDINSSAVTSIKVXXXXX 477
+IL E GGYN+++ + T T +LG L D ++ S ++ + V
Sbjct: 294 WQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSSEIPDHEVKS-CLSPVSVLIIPY 352
Query: 478 XXXSVYLYCSHRTENPFAFLSFLS-LKN 504
Y + SH P S LS +KN
Sbjct: 353 L--KAYPFSSHSP--PHLAGSMLSQIKN 376
Score = 46 (21.3 bits), Expect = 3.5e-16, Sum P(3) = 3.5e-16
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + EG D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSVE 95
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 161 (61.7 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 114 LVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
L+D +C+ +A+ G HHA K E G+C+ N+ L R+L VD
Sbjct: 126 LIDGMCK------VAINWSGGWHHAKKDEASGFCYLNDAVLGILRL--RRKFERILYVDL 177
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG + F ++V+ S+H++ G F+P + +G G G+ Y+ N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPI-QD 233
Query: 233 HMKDADYMAVFHQVL 247
++D Y + VL
Sbjct: 234 GIQDEKYYQICESVL 248
Score = 103 (41.3 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 234 GIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 293
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+IL GGYN+++ + T T +LG L
Sbjct: 294 WQLATLILG-GGGYNLANTARCWTYLTGVILGKTL 327
Score = 47 (21.6 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + EG D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIE 95
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 190 (71.9 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL +D DVHHG ++ FY +RV+ S
Sbjct: 138 HHAKKSEASGFCYVNDIVLGILELLKYHQ--RVLYIDIDVHHGDGVEEAFYTTDRVMTVS 195
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y NIPL + M D Y ++F ++
Sbjct: 196 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNIPL-RDGMDDDAYESIFVPII 243
Score = 85 (35.0 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D Y + F +I + F P V++ G D+ D LG ++ + + ++K
Sbjct: 229 GMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKK 288
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALL 449
+++ GGY I ++S T T L
Sbjct: 289 YNLPFLMVG-GGGYTIRNVSRCWTYETSVAL 318
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 176 (67.0 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 38/95 (40%), Positives = 52/95 (54%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 115 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 172
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
H+Y G ++P + IG G GK Y N PL
Sbjct: 173 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL 203
Score = 53 (23.7 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 14/77 (18%), Positives = 37/77 (48%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSY 74
GL ++ + +P +A EE+ K H+ + I+ L + + +Q+ A+ ++
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRS-SAVKLNKQQT 104
Query: 75 KLSLLSAGSTIELRRNQ 91
+++ AG ++++
Sbjct: 105 DIAVNWAGGLHHAKKSE 121
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 183 (69.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL +D DVHHG ++ FY +RV+ S
Sbjct: 152 HHAKKSEASGFCYVNDIVLGILELLK--MFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 209
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H++ G F+P +G GK Y N+PLN M D + ++F ++
Sbjct: 210 FHKF--GDFFPGT--GHIRDVGAEKGKYYALNVPLNDG-MDDESFRSLFRPLI 257
Score = 89 (36.4 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D + + F+ +I + + PE V++ G D+ D LG +S + +A +L++
Sbjct: 243 GMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRS 302
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLG 450
++L GGY I +++ T +G
Sbjct: 303 YNVPLMVLG-GGGYTIRNVARCWCYETAVAVG 333
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 158 (60.7 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N+ L R+L VD D+HHG + F ++V+ S
Sbjct: 142 HHAKKDEASGFCYLNDAVLGILRL--RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
+H++ G F+P + +G G G+ Y+ N+P+ + ++D Y + VL
Sbjct: 200 LHKFSPG-FFPGT--GDMSDVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVL 248
Score = 101 (40.6 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 234 GIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQ 293
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+IL GGYN+++ + T T +LG L
Sbjct: 294 WQLATLILG-GGGYNLANTARCWTYLTGVILGKTL 327
Score = 47 (21.6 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + EG D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIE 95
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 158 (60.7 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N+ L R+L VD D+HHG + F ++V+ S
Sbjct: 142 HHAKKDEASGFCYLNDAVLGILRL--RRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVS 199
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
+H++ G F+P + +G G G+ Y+ N+P+ + ++D Y + VL
Sbjct: 200 LHKFSPG-FFPGT--GDMSDVGLGKGRYYSVNVPI-QDGIQDEKYYHICESVL 248
Score = 101 (40.6 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 234 GIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYVLQ 293
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+IL GGYN+++ + T T +LG L
Sbjct: 294 WQLATLILG-GGGYNLANTARCWTYLTGVILGKTL 327
Score = 47 (21.6 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + EG D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIE 95
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 160 (61.4 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 114 LVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
L+D +C+ +A+ G HHA K E G+C+ N+ L R+L VD
Sbjct: 164 LIDGMCK------VAINWSGGWHHAKKDEASGFCYLNDAVLGILRL--RRKFDRILYVDL 215
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG + F ++V+ S+H++ G F+P + +G G G+ Y+ N+P+ +
Sbjct: 216 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPI-QD 271
Query: 233 HMKDADYMAVFHQVL 247
++D Y + VL
Sbjct: 272 GIQDEKYYHICESVL 286
Score = 102 (41.0 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 272 GIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 331
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+IL GGYN+++ + T T +LG L
Sbjct: 332 WQLATLILG-GGGYNLANTARCWTYLTGVILGKTL 365
Score = 46 (21.3 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + EG D D++E
Sbjct: 88 LHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSVE 133
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 159 (61.0 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 114 LVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
L+D +C+ +A+ G HHA K E G+C+ N+ L R+L VD
Sbjct: 126 LIDGMCK------VAINWSGGWHHAKKDEASGFCYLNDAVLGILRL--RRKFDRILYVDL 177
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG + F ++V+ S+H++ G F+P + +G G G+ Y+ N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPI-QD 233
Query: 233 HMKDADYMAVFHQVL 247
++D Y + VL
Sbjct: 234 GIQDERYYHICESVL 248
Score = 101 (40.6 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 24/95 (25%), Positives = 42/95 (44%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 234 GIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 293
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+IL GGYN+++ + T T +LG L
Sbjct: 294 WELATLILG-GGGYNLANTARCWTYLTGVILGKTL 327
Score = 45 (20.9 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + +G D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSIE 95
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 216 (81.1 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 62/161 (38%), Positives = 81/161 (50%)
Query: 116 DNICRGEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVH 175
D I +GE ++ + RPPGHHA G+CF NN A+AA+ + R I+D DVH
Sbjct: 139 DLIIQGE-RSAYVLSRPPGHHAFGDLAGGFCFLNNSAIAAERL--RAAGLRPAILDIDVH 195
Query: 176 HGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMK 235
HG TQ +FY + V+ SIH + F+P + G G G GYN N+PL +
Sbjct: 196 HGNGTQGIFYERDDVLTVSIHA-DPARFYPFFWGHAQER-GAGRGLGYNLNLPLARG-TG 252
Query: 236 DADYMAVFHQVLLPMVAEGGYCLKSLAEGAALTLRALLDDP 276
D DY+ V L VA G S AL L A +DDP
Sbjct: 253 DDDYLDTL-SVALRQVASFG----SRVLVVALGLDASIDDP 288
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 159 (61.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 114 LVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
L+D +C+ +A+ G HHA K E G+C+ N+ L R+L VD
Sbjct: 126 LIDGMCK------VAINWSGGWHHAKKDEASGFCYLNDAVLGILRL--RRKFDRILYVDL 177
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG + F ++V+ S+H++ G F+P + +G G G+ Y+ N+P+
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPIQDC 234
Query: 233 HMKDADYMAVFHQVL 247
++D Y + VL
Sbjct: 235 -IQDERYYHICESVL 248
Score = 95 (38.5 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
+ D Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 235 IQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQW 294
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+IL GGYN+++ + T T +LG L
Sbjct: 295 ELATLILG-GGGYNLANTARCWTYLTGVILGKTL 327
Score = 45 (20.9 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + +G D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSIE 95
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 148 (57.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
H M+ E G+C+ N+ L R+L VD D+HHG + F ++V+ S
Sbjct: 51 HKQMRDEASGFCYLNDAVLGILRL--RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 108
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
+H++ G F+P + +G G G+ Y+ N+P+ + ++D Y + VL
Sbjct: 109 LHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPI-QDGIQDEKYYQICESVL 157
Score = 103 (41.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 143 GIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 202
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
+IL GGYN+++ + T T +LG L
Sbjct: 203 WQLATLILG-GGGYNLANTARCWTYLTGVILGKTL 236
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 171 (65.3 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ ++ L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVISILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYRQLFQPVIKQVV 244
Score = 88 (36.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y FQ VI + + P +++ G D+ D LG +S + ++K
Sbjct: 226 GIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKG 285
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKAL----LGDPLPLLE 457
++L GGY + +++ T T L + D LP E
Sbjct: 286 FKIPLLVLG-GGGYTVRNVARCWTFETSLLVEESISDELPYSE 327
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 173 (66.0 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K + G+C+ N++ L L + RVL +D DVHHG ++ FY +RV+ S
Sbjct: 136 HHAKKCDASGFCYINDLVLGILELLKHHP--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H++ F+P + IGE GK Y N+PL K + D+ + +F ++ +V
Sbjct: 194 FHKFGD-KFFPGT--GDVKEIGEREGKFYAINVPL-KDGIDDSSFNRLFRTIISKVV 246
Score = 85 (35.0 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 22/96 (22%), Positives = 43/96 (44%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D + F+ +I + + P +++ G D+ D LG +S + +A ++K
Sbjct: 228 GIDDSSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKK 287
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++ GGY +++ T+ T LL LP
Sbjct: 288 FNLPLLVTG-GGGYTKENVARCWTVETGILLDTELP 322
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 169 (64.5 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYALNVPL-RDGIDDQSYKHLFQPVINQVV 244
Score = 89 (36.4 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 22/95 (23%), Positives = 43/95 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y FQ VI + + P +++ G D+ D LG +S + ++K+
Sbjct: 226 GIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKS 285
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
++L GGY + +++ T T L+ + +
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARCWTYETSLLVDEAI 319
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 154 (59.3 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 42/123 (34%), Positives = 62/123 (50%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 132 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 189
Query: 186 NDNRVVYFS-IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFH 244
+RV+ S + + +LR+ IG G GK Y N P+ + + D Y +F
Sbjct: 190 TTDRVMTVSEVSMVNNFPGTGDLRD-----IGAGKGKYYAVNFPM-RDGIDDESYGQIFK 243
Query: 245 QVL 247
++
Sbjct: 244 PII 246
Score = 85 (35.0 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ +I + + P V++ G D+ D LG ++ + +A +K
Sbjct: 232 GIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKT 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 292 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
Score = 60 (26.2 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 47 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 77
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 168 (64.2 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVV 244
Score = 86 (35.3 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 22/95 (23%), Positives = 43/95 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y FQ VI + + P +++ G D+ D LG +S + ++K+
Sbjct: 226 GIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKS 285
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
++L GGY + +++ T T L+ + +
Sbjct: 286 FNIPLLVLG-GGGYTVRNVARCWTYETSLLVDEAI 319
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 205 (77.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 46/113 (40%), Positives = 62/113 (54%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL +D DVHHG ++ FY +RV+ S
Sbjct: 150 HHAKKSEASGFCYLNDIVLGIIELLRYHP--RVLYIDIDVHHGDGVEEAFYTTDRVMTCS 207
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G F+P E IG G GK Y N+PL + + DA Y +VF V+
Sbjct: 208 FHKY--GEFFPGT--GELRDIGVGAGKNYAVNVPL-RDGIDDATYRSVFEPVI 255
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 204 (76.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 47/131 (35%), Positives = 68/131 (51%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL VD DVHHG ++ FY +RV+ S
Sbjct: 144 HHAKKSEASGFCYTNDIVLGILELLKYHK--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 201
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAEG 254
H+Y G F+P + IG G GK Y+ N+PL + + D Y ++F ++ ++
Sbjct: 202 FHKY--GDFFPGT--GDLKDIGAGKGKLYSVNVPL-RDGITDVSYQSIFKPIMTKVMERF 256
Query: 255 GYCLKSLAEGA 265
C L GA
Sbjct: 257 DPCAVVLQCGA 267
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 204 (76.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 47/131 (35%), Positives = 68/131 (51%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL VD DVHHG ++ FY +RV+ S
Sbjct: 144 HHAKKSEASGFCYTNDIVLGILELLKYHK--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 201
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAEG 254
H+Y G F+P + IG G GK Y+ N+PL + + D Y ++F ++ ++
Sbjct: 202 FHKY--GDFFPGT--GDLKDIGAGKGKLYSVNVPL-RDGITDVSYQSIFKPIMTKVMERF 256
Query: 255 GYCLKSLAEGA 265
C L GA
Sbjct: 257 DPCAVVLQCGA 267
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 191 (72.3 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 45/132 (34%), Positives = 67/132 (50%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 139 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 196
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL---LPMV 251
H+Y G ++P + IG G GK Y N PL + + D Y +F ++ + M
Sbjct: 197 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPL-RDGIDDESYDKIFKPIMCKVMEMY 251
Query: 252 AEGGYCLKSLAE 263
CL+ A+
Sbjct: 252 QPSAICLQCGAD 263
Score = 59 (25.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 15/73 (20%), Positives = 34/73 (46%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHY--DAIYIHPS 72
GL ++ + +P +A EE+ K H+ + ++ L T + +Q+ + +
Sbjct: 45 GLYRKMEIYRPHKAVMEEMTKYHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDG 104
Query: 73 SYKLSLLSAGSTI 85
Y+ LS+G ++
Sbjct: 105 LYEFCQLSSGGSV 117
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 193 (73.0 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 198 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVI 245
Score = 53 (23.7 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 15/73 (20%), Positives = 34/73 (46%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHY--DAIYIHPS 72
GL ++ + +P +A EE+ K H+ + I+ L + + +Q+ + +
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG 105
Query: 73 SYKLSLLSAGSTI 85
++ LSAG ++
Sbjct: 106 LFEFCQLSAGGSV 118
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 193 (73.0 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 147 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 204
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 205 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 252
Score = 53 (23.7 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 15/73 (20%), Positives = 34/73 (46%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHY--DAIYIHPS 72
GL ++ + +P +A EE+ K H+ + I+ L + + +Q+ + +
Sbjct: 51 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG 110
Query: 73 SYKLSLLSAGSTI 85
++ LSAG ++
Sbjct: 111 LFEFCQLSAGGSV 123
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 193 (73.0 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 198 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
Score = 52 (23.4 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 193 (73.0 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 198 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
Score = 52 (23.4 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 193 (73.0 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 198 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
Score = 52 (23.4 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 193 (73.0 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 198 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
Score = 52 (23.4 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 193 (73.0 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 198 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
Score = 52 (23.4 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 193 (73.0 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 198 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
Score = 52 (23.4 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 193 (73.0 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 140 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 197
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 198 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 245
Score = 52 (23.4 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 46 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 76
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 187 (70.9 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 45/122 (36%), Positives = 64/122 (52%)
Query: 127 MAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFY 185
MAV G HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY
Sbjct: 132 MAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFY 189
Query: 186 NDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQ 245
+RV+ S H+Y G ++P + IG G GK Y N P+ + + D Y +F
Sbjct: 190 TTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNFPM-RDGIDDESYGQIFKP 244
Query: 246 VL 247
V+
Sbjct: 245 VI 246
Score = 60 (26.2 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +AT EE+ K H+ E I+ L
Sbjct: 47 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFL 77
Score = 37 (18.1 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 21/96 (21%), Positives = 33/96 (34%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F+ VI I P V + D + +A +K
Sbjct: 232 GIDDESYGQIFKPVITKIGEITFPTKVCLEIQPVHSAGDQFWVFVYCVKGHAKCVEVVKT 291
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 292 FNLPLLMLG-GGGYTIRNVARCWTYETAVALDCEIP 326
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 192 (72.6 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 42/113 (37%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 141 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 198
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F ++
Sbjct: 199 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPIM 246
Score = 52 (23.4 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 47 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 77
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 162 (62.1 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K+E G+C+ N++ LA L RV+ +D DVHHG +Q F++ +RV+ S
Sbjct: 174 HHAKKAEASGFCYVNDIVLAILQLL--RIHPRVMYIDIDVHHGDGVEQAFWSTDRVLTVS 231
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKG--YNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y+ F+P + + G + N+PL+ + D Y+ +F V+
Sbjct: 232 FHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPLHDG-IDDESYVQLFKDVV 285
Score = 79 (32.9 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 24/105 (22%), Positives = 48/105 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y+ F+ V+ +F P +++ G D+ D LG ++ A+ + K
Sbjct: 271 GIDDESYVQLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYTKT 330
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLG--DPL-PLLESDL 460
+++ GGY ++S A T L+ D + P++ S++
Sbjct: 331 FGLPMLVVG-GGGYTPRNVSRAWAHETSILIDAQDKINPVIPSNV 374
Score = 44 (20.5 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 26 REATQEEILKKHTIEQIELLATT-EGS-TDVDALEQLSSHY------DAIYIHPSSYKLS 77
R AT EE+ HT + ++ L T G D A + S + D I ++
Sbjct: 85 RAATVEELSDFHTSDYLDFLQTVVPGDMNDAQASKDFSENIVRFNFGDDCPIFDGLFQYC 144
Query: 78 LLSAGSTIELRRNQKRN 94
L AG++++ R N
Sbjct: 145 SLYAGASLDAARKLCNN 161
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 45/117 (38%), Positives = 65/117 (55%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL +D DVHHG ++ FY +RV+ S
Sbjct: 149 HHAKKSEASGFCYLNDIVLGIIELLRYHP--RVLYIDIDVHHGDGVEEAFYTTDRVMTCS 206
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y G F+P E IG G GK ++ N+PL + + DA Y +VF V+ ++
Sbjct: 207 FHKY--GEFFPGT--GELRDIGVGKGKYHSVNVPL-RDGIDDATYKSVFEPVISKII 258
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 45/117 (38%), Positives = 65/117 (55%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ L L RVL +D DVHHG ++ FY +RV+ S
Sbjct: 149 HHAKKSEASGFCYLNDIVLGIIELLRYHP--RVLYIDIDVHHGDGVEEAFYTTDRVMTCS 206
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y G F+P E IG G GK ++ N+PL + + DA Y +VF V+ ++
Sbjct: 207 FHKY--GEFFPGT--GELRDIGVGKGKYHSVNVPL-RDGIDDATYKSVFEPVISKII 258
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 194 (73.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 43/113 (38%), Positives = 63/113 (55%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ LA L + RVL +D DVHHG Q+ FY +RV+ S
Sbjct: 143 HHARKDEASGFCYVNDIVLAILELLKFHA--RVLYIDIDVHHGDGVQEAFYLTDRVMTVS 200
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H++ G F+P + D IG GK Y+ N+PL + D +Y+ +F V+
Sbjct: 201 FHKFG-GDFFPGT--GDIDEIGAKTGKLYSVNVPL-ADGIDDKNYLNIFKPVI 249
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 193 (73.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA KSE G+C+ N++ LA L RVL +D D+HHG ++ FY +RV+ S
Sbjct: 50 HHAKKSEASGFCYVNDIVLAILELLKYHQ--RVLYIDIDIHHGDGVEEAFYTTDRVMTVS 107
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y G ++P + IG G GK Y N PL + + D Y A+F V+
Sbjct: 108 FHKY--GEYFPGT--GDLRDIGAGKGKYYAVNYPL-RDGIDDESYEAIFKPVM 155
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 151 (58.2 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 41/138 (29%), Positives = 65/138 (47%)
Query: 111 TIELVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLI 169
T+ N+ G K +A+ G HHA K E G+C+ N+ L + RVL
Sbjct: 1118 TLTAAQNLLDG--KCDVAINWAGGWHHAKKDEASGFCYVNDAVLGILKLREK--YDRVLY 1173
Query: 170 VDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPL 229
VD D+HHG + F ++V+ S+H++ G F+P + G G G+ Y N+P
Sbjct: 1174 VDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVTDTGLGKGRWYAVNVPF 1230
Query: 230 NKTHMKDADYMAVFHQVL 247
+ ++D Y F V+
Sbjct: 1231 -EDGVRDDRYCQTFTSVM 1247
Score = 101 (40.6 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D Y F V+ + FNPE V++ G D DP+ ++ A ++
Sbjct: 1233 GVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMCSFNMTSVGVAKCLTYILG 1292
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPL 453
++L GGYN+++ + T T +LG L
Sbjct: 1293 WELPTLLLG-GGGYNLANTARCWTYLTGTVLGQTL 1326
Score = 47 (21.6 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 25 PREATQEEILKKHTIEQIEL 44
P E EE + HT+E+I L
Sbjct: 376 PPEKVDEEYVNPHTVERIPL 395
Score = 47 (21.6 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTDVDALEQLSSHYDAIYIHPS 72
GL++ + ++P A+ EE+ HT ++ L + +G D YD +
Sbjct: 1048 GLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDDPQSADFGLGYDCPVVE-G 1106
Query: 73 SYKLSLLSAGSTIELRRN 90
+ + G+T+ +N
Sbjct: 1107 IFDYAAAVGGATLTAAQN 1124
>UNIPROTKB|A6NDI8 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005881 "cytoplasmic
microtubule" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070846 "Hsp90 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0000209 GO:GO:0005881 GO:GO:0007026 GO:GO:0071218
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 EMBL:AF196971
GO:GO:0004407 GO:GO:0042903 HGNC:HGNC:14064 ChiTaRS:HDAC6
GO:GO:0070846 IPI:IPI00941641 SMR:A6NDI8 STRING:A6NDI8
Ensembl:ENST00000376610 Ensembl:ENST00000376643
HOGENOM:HOG000198256 HOVERGEN:HBG099245 Uniprot:A6NDI8
Length = 210
Score = 151 (58.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 30/81 (37%), Positives = 52/81 (64%)
Query: 7 IKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDA 66
IK+ + GL+ RC Q R A +EE++ H++E I+L+ TT+ + + L L+ YD+
Sbjct: 115 IKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE-LRVLADTYDS 173
Query: 67 IYIHPSSYKLSLLSAGSTIEL 87
+Y+HP+SY + L++GS + L
Sbjct: 174 VYLHPNSYSCACLASGSVLRL 194
Score = 53 (23.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 112 IELVDNICRGEIKNGMAVI 130
+ LVD + EI+NGMA+I
Sbjct: 192 LRLVDAVLGAEIRNGMAII 210
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 168 (64.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 59 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 116
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 117 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVV 169
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 143 (55.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 123 IKNGMAVIRPPGHHAMKSEY-CGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQ 181
+++G+A+ G+H +++ G+C FN++A+AA AL SV +VLI+D DVHHG T
Sbjct: 112 LQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTA 171
Query: 182 QMFYNDNRVVYFSIH 196
+ + ++ S H
Sbjct: 172 TLCAERDEIITLSFH 186
Score = 84 (34.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA- 420
D E+++ F QV+ P+L+L AG D +D LG +S A A ++ LA
Sbjct: 210 DEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAK 269
Query: 421 QGRIILA--LEGGY 432
Q I +A + GGY
Sbjct: 270 QESIPIACVIGGGY 283
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 143 (55.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 123 IKNGMAVIRPPGHHAMKSEY-CGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQ 181
+++G+A+ G+H +++ G+C FN++A+AA AL SV +VLI+D DVHHG T
Sbjct: 112 LQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTA 171
Query: 182 QMFYNDNRVVYFSIH 196
+ + ++ S H
Sbjct: 172 TLCAERDEIITLSFH 186
Score = 84 (34.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA- 420
D E+++ F QV+ P+L+L AG D +D LG +S A A ++ LA
Sbjct: 210 DEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAK 269
Query: 421 QGRIILA--LEGGY 432
Q I +A + GGY
Sbjct: 270 QESIPIACVIGGGY 283
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 163 (62.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 39/134 (29%), Positives = 68/134 (50%)
Query: 114 LVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
L+D +C+ +A+ G HHA K E G+C+ N+ L R+L VD
Sbjct: 126 LIDGMCK------VAINWSGGWHHAKKDEASGFCYLNDAVLGILRL--RRKFERILYVDL 177
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG + F ++V+ S+H++ G F+P +S+ +G G G+ Y+ N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPG--KSDVSDVGLGKGRYYSVNVPI-QD 233
Query: 233 HMKDADYMAVFHQV 246
++D Y + V
Sbjct: 234 GIQDEKYYQICESV 247
Score = 47 (21.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + EG D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIE 95
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 177 (67.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 41/113 (36%), Positives = 61/113 (53%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D DVHHG Q+ FY +RV+ S
Sbjct: 139 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDVHHGDGVQEAFYLTDRVMTAS 196
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+Y + F+P + Y+ IG G+ Y+ N+PL K + D Y VF ++
Sbjct: 197 FHKYGN-YFFPGTGDM-YE-IGAESGRYYSVNVPL-KEGIDDQSYFQVFKPII 245
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 158 (60.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 38/135 (28%), Positives = 67/135 (49%)
Query: 114 LVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
L+D +C+ +A+ G HHA K E G+C+ N+ L R+L VD
Sbjct: 126 LIDGMCK------VAINWSGGWHHAKKDEASGFCYLNDAVLGILRL--RRKFERILYVDL 177
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG + F ++V+ S+H++ G F+P + +G G G+ Y+ N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPI-QD 233
Query: 233 HMKDADYMAVFHQVL 247
++D Y + + L
Sbjct: 234 GIQDEKYYQICERAL 248
Score = 47 (21.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + EG D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIE 95
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 152 (58.6 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 40/113 (35%), Positives = 56/113 (49%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA SE G+C+ N++ LA L + RVL +D D HHG T++ FY + V+ S
Sbjct: 128 HHAKNSEASGFCYVNDIVLAILELLKY--LQRVLCMDIDTHHGDGTEEAFYTADWVMTVS 185
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H + +LR+ IG G GK Y N PL + D A+F V+
Sbjct: 186 FHNFP---VTGDLRD-----IGAGKGKYYAINYPLRDC-IDDESCEAIFKPVM 229
Score = 53 (23.7 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 21/95 (22%), Positives = 41/95 (43%)
Query: 360 MSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL 419
+ D A F+ V+ + P V++ G D+ D LG ++ + + ++K+
Sbjct: 216 IDDESCEAIFKPVMSKV---MEPSAVVLQCGSDSLSGDWLGSFNLTIKGHK-CVGFVKSF 271
Query: 420 AQGRIILALEGGYNISSISYAMTLCTKALLGDPLP 454
++L GGY I +++ T T L +P
Sbjct: 272 NLPMLMLR-GGGYTIHNVARCWTYETAVTLDTEIP 305
Score = 52 (23.4 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 15 GLVQRCKFIQPREATQEEILKKHTIEQIELL 45
GL ++ + +P +A EE+ K H+ + I+ L
Sbjct: 34 GLYRKMEIYRPHKANAEEMTKYHSDDYIKFL 64
>UNIPROTKB|H0YHJ5 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000547259 Uniprot:H0YHJ5
Length = 110
Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 383 ELVLVSAGYDACVNDP--LGGCKVSPEAYAHFTHWLKALAQGRIILALEGGYNISSISYA 440
+LVLVSAG+DA P LGG VS + + + T L LA G ++LALEGG+++++I A
Sbjct: 2 DLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDA 61
Query: 441 MTLCTKALLGD 451
C ALLG+
Sbjct: 62 SEACVAALLGN 72
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 154 (59.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 37/127 (29%), Positives = 64/127 (50%)
Query: 114 LVDNICRGEIKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDW 172
L+D +C+ +A+ G HHA K E G+C+ N+ L R+L VD
Sbjct: 126 LIDGMCK------VAINWSGGWHHAKKDEASGFCYLNDAVLGILRL--RRKFDRILYVDL 177
Query: 173 DVHHGQATQQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKT 232
D+HHG + F ++V+ S+H++ G F+P + +G G G+ Y+ N+P+ +
Sbjct: 178 DLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPI-QD 233
Query: 233 HMKDADY 239
++D Y
Sbjct: 234 GIQDEKY 240
Score = 47 (21.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 16 LVQRCKFIQPREATQEEILKKHTIEQIELL--ATTEGSTD-VDALE 58
L ++ + ++P+ A+ EE+ HT ++ L + EG D D++E
Sbjct: 50 LHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIE 95
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVISQVV 244
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVISQVV 244
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVISQVV 244
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVISQVV 244
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 168 (64.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVV 244
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 168 (64.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVV 244
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 168 (64.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 39/117 (33%), Positives = 62/117 (52%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K E G+C+ N++ + L RVL +D D+HHG Q+ FY +RV+ S
Sbjct: 134 HHAKKFEASGFCYVNDIVIGILELLKYHP--RVLYIDIDIHHGDGVQEAFYLTDRVMTVS 191
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
H+Y + F+P + Y+ +G G+ Y N+PL + + D Y +F V+ +V
Sbjct: 192 FHKYGN-YFFPGTGDM-YE-VGAESGRYYCLNVPL-RDGIDDQSYKHLFQPVINQVV 244
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 150 (57.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA++ G+C +N++A+A A +V VD D HHG Q +FY+D V+ S
Sbjct: 132 HHALRDAASGFCIYNDLAVAI--AKFREKGLKVAYVDLDAHHGDGVQWLFYSDPGVLTIS 189
Query: 195 IHRYEHGTF-WPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
IH E G + +P +GEG G NIPL + + +D ++ +++ ++
Sbjct: 190 IH--ETGRYLFPGT--GSITELGEGAAYGTKINIPL-EPYTEDDSWLWALEEIVPELI 242
Score = 59 (25.8 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 421
D ++ A ++++ + +F P++++ G D+ DPL + A+ L LA
Sbjct: 227 DDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAH 286
Query: 422 ----GRIILALEGGYN 433
GR + GGY+
Sbjct: 287 EVCGGRWLAGGGGGYD 302
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 150 (57.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA++ G+C +N++A+A A +V VD D HHG Q +FY+D V+ S
Sbjct: 132 HHALRDAASGFCIYNDLAVAI--AKFREKGLKVAYVDLDAHHGDGVQWLFYSDPGVLTIS 189
Query: 195 IHRYEHGTF-WPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMV 251
IH E G + +P +GEG G NIPL + + +D ++ +++ ++
Sbjct: 190 IH--ETGRYLFPGT--GSITELGEGAAYGTKINIPL-EPYTEDDSWLWALEEIVPELI 242
Score = 59 (25.8 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQ 421
D ++ A ++++ + +F P++++ G D+ DPL + A+ L LA
Sbjct: 227 DDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAH 286
Query: 422 ----GRIILALEGGYN 433
GR + GGY+
Sbjct: 287 EVCGGRWLAGGGGGYD 302
>SGD|S000006037 [details] [associations]
symbol:HOS3 "Trichostatin A-insensitive homodimeric histone
deacetylase (HDAC)" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000083 "regulation of transcription involved in
G1/S phase of mitotic cell cycle" evidence=IGI;IPI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005935 "cellular bud neck"
evidence=IDA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] SGD:S000006037 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0005935 GO:GO:0045944
GO:GO:0006351 EMBL:BK006949 EMBL:U43503 GO:GO:0070932 GO:GO:0000083
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 PIR:S62006
RefSeq:NP_015209.1 ProteinModelPortal:Q02959 DIP:DIP-8047N
IntAct:Q02959 MINT:MINT-2781063 STRING:Q02959 PaxDb:Q02959
PeptideAtlas:Q02959 EnsemblFungi:YPL116W GeneID:855987
KEGG:sce:YPL116W CYGD:YPL116w HOGENOM:HOG000246666 KO:K11484
OMA:AAITMYP OrthoDB:EOG4BZR9V NextBio:980834 Genevestigator:Q02959
GermOnline:YPL116W Uniprot:Q02959
Length = 697
Score = 148 (57.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 115 VDNICRG----EIKN-GMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLI 169
VD+I +G I N IRPPGHH G+C NN +A ++A D +V+ V++
Sbjct: 170 VDSIFKGPSAEHISNRAFVAIRPPGHHCHYGTPSGFCLLNNAHVAIEYAYDTYNVTHVVV 229
Query: 170 VDWDVHHGQATQQM 183
+D+D+HHG TQ +
Sbjct: 230 LDFDLHHGDGTQDI 243
Score = 62 (26.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 369 FQQVILPIAYQFNP--ELVLVSAGYDACVNDPLG----GCKVSPEAYAHFTHWLKALAQ- 421
F+ L + Q P LV++SAG+DA + V Y FT LAQ
Sbjct: 345 FRSAKLEMNQQGRPFKGLVVISAGFDASEFEQTSMQRHSVNVPTSFYTTFTKDALKLAQM 404
Query: 422 ---GRIILALEGGYNISSI 437
G+++ +EGGY+ +I
Sbjct: 405 HCHGKVLSLMEGGYSDKAI 423
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 124 (48.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 32/107 (29%), Positives = 56/107 (52%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQ 181
+++G+A G HHA G+C FN++A+ + + L++ V RVLI D DVH G T
Sbjct: 107 LEHGLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDGTA 166
Query: 182 QMFYNDNRVVYFSIHRYEHGTFWPNLRESEYD-HIGEGIGKGYNFNI 227
++ + V S+H ++ F +S++D + G+G N+
Sbjct: 167 RILQHTADAVTVSLHCEKN--FPARKAQSDWDIPLPMGMGDADYLNV 211
Score = 76 (31.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
GM D +Y+ + + + P+LVL AG D +D LG K++ A +
Sbjct: 202 GMGDADYLNVVDDTLNYLLPLYQPDLVLYDAGVDVHQDDALGYLKLTDAGVAERDERVMR 261
Query: 419 LAQGR---IILALEGGYN 433
GR ++ + GGY+
Sbjct: 262 HCLGRDIPVVGVIGGGYS 279
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 132 (51.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQ 181
+K+GMA G HHA G+C FN++A+ +Q+ L + V +VLI D DVH G T
Sbjct: 107 LKHGMACHLAGGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTA 166
Query: 182 QMFYNDNRVVYFSIHRYEHGTFWPNLRESEYD-HIGEGIGKGYNFNI 227
++ + + S+H ++ F +S++D + G+G N+
Sbjct: 167 RILADTEDAITVSLHCEKN--FPARKAQSDWDIPLPMGMGDANYLNV 211
Score = 67 (28.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAH 411
GM D Y+ ++ + + P+LVL AG D +D LG +++ + A+
Sbjct: 202 GMGDANYLNVVDDLLNYLLPFYKPDLVLYDAGVDVHKDDALGYLQLTDQGVAN 254
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 142 (55.0 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA K G+C+ N+V L Q L ++++ VD+D+HHG ++ F ++ S
Sbjct: 210 HHAFKQRASGFCYINDVVLLIQR-LRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTIS 268
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVF-HQVLLPMV 251
+H YE G F+P + + NIPL H D +Y+ + +++ P++
Sbjct: 269 VHLYEPG-FFPGTGSLSDSRKDKNV-----VNIPLK--HGCDDNYLELIASKIVNPLI 318
Score = 62 (26.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 362 DPEYIAAF-QQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFT-HWLKAL 419
D Y+ +++ P+ + PE +++ G D + D +++ + + +K+
Sbjct: 302 DDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGDRFNEWQLTIRGLSRIIINIMKSY 361
Query: 420 AQGRIILALEGGYN--ISSISYA-MTLC-TK 446
+ I L GGYN + S Y +T C TK
Sbjct: 362 PRAHIFLLGGGGYNDLLMSRFYTYLTWCVTK 392
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 99 (39.9 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNT-SVSRVLIVDWDVHHGQAT 180
+ G A+ G HH + G+C + ++ LA + + VS+ I+D D H G
Sbjct: 128 VDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKATIIDLDAHQGNGH 187
Query: 181 QQMFYNDNRV-VYFSIHRY 198
++ F ND+RV + + +RY
Sbjct: 188 ERDFMNDHRVYIMDAYNRY 206
Score = 90 (36.7 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D EY+ + + P++++ +AG D DPLGG +SP+ +
Sbjct: 227 GTEDTEYLQKVHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFK 286
Query: 419 LAQGR---IILALEGGY 432
A+ R I++ GGY
Sbjct: 287 AARSRGIPILMVTSGGY 303
Score = 51 (23.0 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ +Q REAT E++L HT
Sbjct: 49 KEEKLIGDDLIVQAREATDEDLLVVHT 75
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 115 (45.5 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 123 IKNGMAVIRPPGHHAMKSEY-CGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQ 181
++ G+A+ G+H E+ GYC FN++ +AA+ + + ++LI D DVH G T
Sbjct: 107 LQTGIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTA 166
Query: 182 QMFYNDNRVVYFSIHRYEHGTFWPNLRE-SEYD 213
+ ++ SIH ++ +P+ ++ S YD
Sbjct: 167 TLSQLHQGIISCSIHCKDN---FPSRKQHSHYD 196
Score = 73 (30.8 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 358 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEA-YAHFTHWL 416
KG D Y+ +Q + + P+L+L AG D +D LG ++S + Y L
Sbjct: 201 KGTDDSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVL 260
Query: 417 KALAQGRIILA--LEGGYN 433
I +A + GGY+
Sbjct: 261 SMARAANIPVAAVIGGGYS 279
Score = 46 (21.3 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 21 KFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLS 80
+F P T EEI++ H + +E +G+ AL ++ + + + + L+ S
Sbjct: 43 QFHTPTPMTAEEIMQVHHRDYVEQFI--DGTLATSALRRIGFPWSEALVERTLHSLAGTS 100
Query: 81 AGSTIELR 88
+ + L+
Sbjct: 101 LTAALALQ 108
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 115 (45.5 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 123 IKNGMAVIRPPGHHAMKSEY-CGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQ 181
++ G+A+ G+H E+ GYC FN++ +AA+ + + ++LI D DVH G T
Sbjct: 107 LQTGIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHKILIFDCDVHQGDGTA 166
Query: 182 QMFYNDNRVVYFSIHRYEHGTFWPNLRE-SEYD 213
+ ++ SIH ++ +P+ ++ S YD
Sbjct: 167 TLSQLHQGIISCSIHCKDN---FPSRKQHSHYD 196
Score = 73 (30.8 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 358 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEA-YAHFTHWL 416
KG D Y+ +Q + + P+L+L AG D +D LG ++S + Y L
Sbjct: 201 KGTDDSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVL 260
Query: 417 KALAQGRIILA--LEGGYN 433
I +A + GGY+
Sbjct: 261 SMARAANIPVAAVIGGGYS 279
Score = 46 (21.3 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 21 KFIQPREATQEEILKKHTIEQIELLATTEGSTDVDALEQLSSHYDAIYIHPSSYKLSLLS 80
+F P T EEI++ H + +E +G+ AL ++ + + + + L+ S
Sbjct: 43 QFHTPTPMTAEEIMQVHHRDYVEQFI--DGTLATSALRRIGFPWSEALVERTLHSLAGTS 100
Query: 81 AGSTIELR 88
+ + L+
Sbjct: 101 LTAALALQ 108
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 127 (49.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA + G+C N++ LAA L N ++S+VLI D DVH G T ++ N+ V S
Sbjct: 120 HHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVS 179
Query: 195 IH 196
IH
Sbjct: 180 IH 181
Score = 67 (28.6 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 358 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPE 407
KG +D Y+ + F P+ V+ AG D ND LG +S +
Sbjct: 201 KGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDISTQ 250
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 127 (49.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HHA + G+C N++ LAA L N ++S+VLI D DVH G T ++ N+ V S
Sbjct: 120 HHAFANFGSGFCMINDLYLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVS 179
Query: 195 IH 196
IH
Sbjct: 180 IH 181
Score = 67 (28.6 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 358 KGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPE 407
KG +D Y+ + F P+ V+ AG D ND LG +S +
Sbjct: 201 KGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDISTQ 250
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 100 (40.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HH G+C F +++L A +SRV+I+D D H G + +DNRV
Sbjct: 200 HHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYILD 259
Query: 195 IHRYE 199
++ E
Sbjct: 260 MYNPE 264
Score = 96 (38.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G + EY+ + + + F PELV+ +AG D DPLG K+SP+ +
Sbjct: 285 GTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFR 344
Query: 419 LAQGR---IILALEGGYNISS 436
A+ + +++ GGY SS
Sbjct: 345 FAREKNIPLVMLTSGGYMKSS 365
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 11 CKEL---GLVQRCKFIQPREATQEEILKKHT---IEQIELLATTEGSTDV 54
CK L G ++ ++P EA++ ++L H+ + ++ AT T+V
Sbjct: 104 CKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENYLNSLKSSATVARITEV 153
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 96 (38.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
++ G A+ G HH G+C + ++ LA + + +SR I+D D H G
Sbjct: 101 VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGH 160
Query: 181 QQMFYNDNRVVYFSIH 196
++ F +D RV ++
Sbjct: 161 ERDFMDDKRVYIMDVY 176
Score = 88 (36.0 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D EY+ ++ I + P++V+ +AG D D LGG +SP +
Sbjct: 200 GTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 259
Query: 419 LAQGR---IILALEGGY 432
+ +GR I++ GGY
Sbjct: 260 MVRGRRVPILMVTSGGY 276
Score = 49 (22.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA++E++L HT
Sbjct: 22 KEEKLLSDSMLVEAREASEEDLLVVHT 48
>ASPGD|ASPL0000069638 [details] [associations]
symbol:hosB species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001304 EMBL:AACD01000117 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K11484
OrthoDB:EOG4BZR9V RefSeq:XP_664623.1 ProteinModelPortal:Q5AXG1
EnsemblFungi:CADANIAT00000457 GeneID:2870089 KEGG:ani:AN7019.2
HOGENOM:HOG000170608 OMA:DLYLCSE Uniprot:Q5AXG1
Length = 1125
Score = 138 (53.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 121 GEIKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQAT 180
G K IRPPGHH G+C+ NNV + +A ++ I+D+D+HHG +
Sbjct: 353 GPTKRAFVCIRPPGHHCSSGNPSGFCWINNVHVGISYAAMTHDLTHAAILDFDLHHGDGS 412
Query: 181 QQMFYNDNR 189
Q + + N+
Sbjct: 413 QDIAWEQNK 421
Score = 69 (29.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 385 VLVSAGYDACVNDPLG----GCKVSPEAYAHFTHWLKALAQ-------GRIILALEGGYN 433
+ +SAG+DA + +G V E YA FT + +A+ GRI+ LEGGY+
Sbjct: 527 IFISAGFDASEWEGMGMQRHKVNVPTEFYARFTADVVRMAEEEGLGVDGRIVSVLEGGYS 586
Query: 434 ISSISYAMTLCTKALLGD 451
+++ + L + LGD
Sbjct: 587 NRALTTGV-LSHLSGLGD 603
Score = 39 (18.8 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 251 VAEGGYCLKSLAEGAALTLRALLD 274
V EGGY ++L G L L D
Sbjct: 580 VLEGGYSNRALTTGVLSHLSGLGD 603
Score = 39 (18.8 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 339 VPLLFLLQIPGCYPHRTKSKGMSDPEYIAAFQ----QVILP 375
+PLL L+ P +K K S P Y A Q +V+LP
Sbjct: 649 LPLLEELEALVYPPPPSKPKEKSAPTYFAPTQSFAAKVVLP 689
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 96 (38.9 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
++ G A+ G HH G+C + ++ LA + + +SR I+D D H G
Sbjct: 129 VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGH 188
Query: 181 QQMFYNDNRVVYFSIH 196
++ F +D RV ++
Sbjct: 189 ERDFMDDKRVYIMDVY 204
Score = 88 (36.0 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D EY+ ++ I + P++V+ +AG D D LGG +SP +
Sbjct: 228 GTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 287
Query: 419 LAQGR---IILALEGGY 432
+ +GR I++ GGY
Sbjct: 288 MVRGRRVPILMVTSGGY 304
Score = 49 (22.3 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA++E++L HT
Sbjct: 50 KEEKLLSDSMLVEAREASEEDLLVVHT 76
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 95 (38.5 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
+ G A+ G HH G+C + ++ LA + D +S+ IVD D H G
Sbjct: 128 VDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKATIVDLDAHQGNGH 187
Query: 181 QQMFYNDNRVVYFSIH 196
++ F D RV ++
Sbjct: 188 ERDFMGDKRVYIMDVY 203
Score = 93 (37.8 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D EY+ ++ + + P++V+ +AG D D LGG +SP+ +
Sbjct: 227 GTEDDEYLQKVERNLEKALQEHRPDIVVYNAGTDILEGDRLGGLAISPQGVVKRDELVFR 286
Query: 419 LAQGR---IILALEGGY 432
+ +GR I++ GGY
Sbjct: 287 IVRGRQLPILMVTSGGY 303
Score = 47 (21.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA+ E++L HT
Sbjct: 49 KEEKLLSDSMLVEAREASDEDLLVVHT 75
>GENEDB_PFALCIPARUM|PF14_0690 [details] [associations]
symbol:PF14_0690 "histone deactylase, putative"
species:5833 "Plasmodium falciparum" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0006325 "chromatin
organization" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR002110
SMART:SM00248 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006355
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:AE014187 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
RefSeq:XP_001348864.2 ProteinModelPortal:Q8IKB6 IntAct:Q8IKB6
MINT:MINT-1556967 PRIDE:Q8IKB6 EnsemblProtists:PF14_0690:mRNA
GeneID:812272 KEGG:pfa:PF14_0690 EuPathDB:PlasmoDB:PF3D7_1472200
Uniprot:Q8IKB6
Length = 2251
Score = 106 (42.4 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 124 KNGMAVIRPPGHHA---------MKSEYC-----GYCFFNNVALAAQHA-LDNTSVSRVL 168
K V+RPPGHH + E G+C NNVA+ +A R+
Sbjct: 1673 KKIFCVVRPPGHHLGTFGAAQFNLTDEDVAAGSQGFCILNNVAVGLAYAKYTYKKFERIA 1732
Query: 169 IVDWDVHHGQATQQMFYN 186
I+D+DVHHG T+Q+ N
Sbjct: 1733 IIDFDVHHGNGTEQIIRN 1750
Score = 100 (40.3 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 31/87 (35%), Positives = 43/87 (49%)
Query: 355 TKSKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPL--GGCKVSPEAYAHF 412
T K M+ E++ F IL Y F P L+ +SAG+D D + G K + Y +
Sbjct: 1810 TLKKNMTSLEFLNIFHSKILIHLYYFKPNLLFLSAGFDGHQLDYVNNGFVKKNTSTYFYL 1869
Query: 413 THWLKALAQGR----IILALEGGYNIS 435
T + +L Q + II LEGGYN S
Sbjct: 1870 TKLVLSL-QNKLNFPIISVLEGGYNTS 1895
Score = 70 (29.7 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 186 NDNRVVYFS-IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFH 244
ND + ++FS +H Y+ G F+P + YD + + Y N+ L K +M +++ +FH
Sbjct: 1774 NDKKNIFFSSVHAYD-GYFYPG---TGYDTVEL---EPYIINVTLKK-NMTSLEFLNIFH 1825
Query: 245 QVLL 248
+L
Sbjct: 1826 SKIL 1829
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 3 KHVNIKDPCKELGLVQRCKFIQPREATQEEIL--KKHTIEQIELLATTEGSTDVDALEQL 60
KH+ + +PC + K P +T+ ++L KH I I A + V +++
Sbjct: 1258 KHIFVPEPCDHPYERNKLKNNIPENSTRLDVLISNKHGILNINTFAKFK----VKCVDRK 1313
Query: 61 SSHYDAIYIHPSSY 74
++ D + +H SY
Sbjct: 1314 ATVNDILRVHDVSY 1327
>UNIPROTKB|Q8IKB6 [details] [associations]
symbol:PF14_0690 "Histone deacetylase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0004407 "histone deacetylase
activity" evidence=ISS] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] InterPro:IPR002110 SMART:SM00248 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0006355 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AE014187
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
RefSeq:XP_001348864.2 ProteinModelPortal:Q8IKB6 IntAct:Q8IKB6
MINT:MINT-1556967 PRIDE:Q8IKB6 EnsemblProtists:PF14_0690:mRNA
GeneID:812272 KEGG:pfa:PF14_0690 EuPathDB:PlasmoDB:PF3D7_1472200
Uniprot:Q8IKB6
Length = 2251
Score = 106 (42.4 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 124 KNGMAVIRPPGHHA---------MKSEYC-----GYCFFNNVALAAQHA-LDNTSVSRVL 168
K V+RPPGHH + E G+C NNVA+ +A R+
Sbjct: 1673 KKIFCVVRPPGHHLGTFGAAQFNLTDEDVAAGSQGFCILNNVAVGLAYAKYTYKKFERIA 1732
Query: 169 IVDWDVHHGQATQQMFYN 186
I+D+DVHHG T+Q+ N
Sbjct: 1733 IIDFDVHHGNGTEQIIRN 1750
Score = 100 (40.3 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 31/87 (35%), Positives = 43/87 (49%)
Query: 355 TKSKGMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPL--GGCKVSPEAYAHF 412
T K M+ E++ F IL Y F P L+ +SAG+D D + G K + Y +
Sbjct: 1810 TLKKNMTSLEFLNIFHSKILIHLYYFKPNLLFLSAGFDGHQLDYVNNGFVKKNTSTYFYL 1869
Query: 413 THWLKALAQGR----IILALEGGYNIS 435
T + +L Q + II LEGGYN S
Sbjct: 1870 TKLVLSL-QNKLNFPIISVLEGGYNTS 1895
Score = 70 (29.7 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 186 NDNRVVYFS-IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFH 244
ND + ++FS +H Y+ G F+P + YD + + Y N+ L K +M +++ +FH
Sbjct: 1774 NDKKNIFFSSVHAYD-GYFYPG---TGYDTVEL---EPYIINVTLKK-NMTSLEFLNIFH 1825
Query: 245 QVLL 248
+L
Sbjct: 1826 SKIL 1829
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 3 KHVNIKDPCKELGLVQRCKFIQPREATQEEIL--KKHTIEQIELLATTEGSTDVDALEQL 60
KH+ + +PC + K P +T+ ++L KH I I A + V +++
Sbjct: 1258 KHIFVPEPCDHPYERNKLKNNIPENSTRLDVLISNKHGILNINTFAKFK----VKCVDRK 1313
Query: 61 SSHYDAIYIHPSSY 74
++ D + +H SY
Sbjct: 1314 ATVNDILRVHDVSY 1327
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 96 (38.9 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
++ G A+ G HH G+C + ++ LA + + +SR I+D D H G
Sbjct: 129 VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGH 188
Query: 181 QQMFYNDNRVVYFSIH 196
++ F +D RV ++
Sbjct: 189 ERDFMDDKRVYIMDVY 204
Score = 87 (35.7 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D EY+ ++ I + P++V+ +AG D D LGG +SP +
Sbjct: 228 GTEDDEYLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 287
Query: 419 LAQGR---IILALEGGY 432
+ +GR I++ GGY
Sbjct: 288 MVRGRHVPILMVTSGGY 304
Score = 49 (22.3 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA++E++L HT
Sbjct: 50 KEEKLLSDSMLVEAREASEEDLLVVHT 76
>CGD|CAL0004270 [details] [associations]
symbol:HOS3 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005935
"cellular bud neck" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=IEA] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 129 (50.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 111 TIE-LVDNIC--RGEIKNGMA--VIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS 165
TIE VD++ R + + +A VIRPPGHH+ G+C NNV + ++A + V+
Sbjct: 286 TIESAVDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCLLNNVQIGIEYAFEQYGVT 345
Query: 166 RVLIVDWDVHHGQATQQM 183
I+D D+HHG +Q +
Sbjct: 346 HCAILDIDLHHGDGSQDI 363
Score = 71 (30.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 380 FNPELVLVSAGYDAC-VNDPL---GGCKVSPEAYAHFTHWLKALAQ----GRIILALEGG 431
F P L+ +SAG+DA +P G V Y+ FT + LA+ G+++ LEGG
Sbjct: 517 FKP-LIAISAGFDASQYENPQMQRHGINVPTSFYSTFTKDVVKLAKIHTNGKVLSFLEGG 575
Query: 432 YNISSIS 438
Y+ ++S
Sbjct: 576 YSDGALS 582
>UNIPROTKB|Q5AF34 [details] [associations]
symbol:HOS3 "Likely histone deacetylase Hos3p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0004270 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11484
RefSeq:XP_720292.1 RefSeq:XP_720522.1 ProteinModelPortal:Q5AF34
GeneID:3637886 GeneID:3638131 KEGG:cal:CaO19.10288
KEGG:cal:CaO19.2772 Uniprot:Q5AF34
Length = 713
Score = 129 (50.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 111 TIE-LVDNIC--RGEIKNGMA--VIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVS 165
TIE VD++ R + + +A VIRPPGHH+ G+C NNV + ++A + V+
Sbjct: 286 TIESAVDSLFSKRKKENHNLAFVVIRPPGHHSHACLPSGFCLLNNVQIGIEYAFEQYGVT 345
Query: 166 RVLIVDWDVHHGQATQQM 183
I+D D+HHG +Q +
Sbjct: 346 HCAILDIDLHHGDGSQDI 363
Score = 71 (30.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 380 FNPELVLVSAGYDAC-VNDPL---GGCKVSPEAYAHFTHWLKALAQ----GRIILALEGG 431
F P L+ +SAG+DA +P G V Y+ FT + LA+ G+++ LEGG
Sbjct: 517 FKP-LIAISAGFDASQYENPQMQRHGINVPTSFYSTFTKDVVKLAKIHTNGKVLSFLEGG 575
Query: 432 YNISSIS 438
Y+ ++S
Sbjct: 576 YSDGALS 582
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 94 (38.1 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
++ G A+ G HH G+C + ++ LA + + +SR IVD D H G
Sbjct: 101 MERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIVDLDAHQGNGH 160
Query: 181 QQMFYNDNRVVYFSIH 196
++ F D RV ++
Sbjct: 161 ERDFMGDKRVYIMDVY 176
Score = 89 (36.4 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D EY+ ++ + + P++V+ +AG D D LGG +SP+ +
Sbjct: 200 GTEDDEYLDKVERNLQKALQEHLPDVVVYNAGTDILEGDRLGGLSISPQGIVKRDELVFR 259
Query: 419 LAQGR---IILALEGGY 432
+ +GR I++ GGY
Sbjct: 260 VVRGRQVPILMVTSGGY 276
Score = 45 (20.9 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA+ E++L HT
Sbjct: 22 KEEKLLSDGMLVEAREASDEDLLVVHT 48
>UNIPROTKB|G4N4X5 [details] [associations]
symbol:MGG_06043 "Histone deacetylase HOS3" species:242507
"Magnaporthe oryzae 70-15" [GO:0004407 "histone deacetylase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005935 "cellular bud
neck" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0005935 EMBL:CM001233 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11484 RefSeq:XP_003711894.1 EnsemblFungi:MGG_06043T0
GeneID:2683932 KEGG:mgr:MGG_06043 Uniprot:G4N4X5
Length = 1141
Score = 140 (54.3 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 113 ELVDNICRGE--IKNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIV 170
E VD + E K IRPPGHH S G+C+ NNV + H + + ++ I+
Sbjct: 317 EAVDAVFTPENPAKRAFVAIRPPGHHCSASFPSGFCWVNNVHVGIMHGILSHGLTHAAII 376
Query: 171 DWDVHHGQATQQMFYNDN 188
D+D+HHG +Q + + N
Sbjct: 377 DFDLHHGDGSQAIAWQHN 394
Score = 124 (48.7 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 124 KNGMAVIRPPGHHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQM 183
K IRPPGHH S G+C+ NNV + H + + ++ I+D+D+HHG +Q +
Sbjct: 330 KRAFVAIRPPGHHCSASFPSGFCWVNNVHVGIMHGILSHGLTHAAIIDFDLHHGDGSQAI 389
Query: 184 FYNDNR----------------VVYFSIH 196
+ N + YFS+H
Sbjct: 390 AWQHNTRGIGLSTNAAWWKKPSIGYFSLH 418
Score = 64 (27.6 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 385 VLVSAGYDACVNDPLG----GCKVSPEAYAHFTHWLKALA-------QGRIILALEGGYN 433
+ +SAG+DA + G V E YA T + +A +GR+I LEGGY+
Sbjct: 501 IFLSAGFDASEWEGAGMQRHKVNVPTEFYARLTRDVVKIAAEEETSVEGRVISVLEGGYS 560
Query: 434 ISSISYAMTLCTKALLGD 451
++ + L GD
Sbjct: 561 DRALCSGILSHVSGLAGD 578
Score = 42 (19.8 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 251 VAEGGYCLKSLAEGAALTLRALL-DDP 276
V EGGY ++L G + L DDP
Sbjct: 554 VLEGGYSDRALCSGILSHVSGLAGDDP 580
Score = 41 (19.5 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 529 STEGAHSSPLHIPRA 543
ST SSP+ +PRA
Sbjct: 682 STTDGRSSPMPVPRA 696
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 111 (44.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 35/114 (30%), Positives = 54/114 (47%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HH K + G+ + N+V LA L S RVL ++ HG ++ F + +RV+ S
Sbjct: 147 HHVKKDKASGFGYVNDVVLAILELLK--SFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVS 204
Query: 195 IHRY-EHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVL 247
H+ + G S+Y GEG G+ Y+ N PL K + D +F V+
Sbjct: 205 FHKVGDTGDI------SDY---GEGKGQYYSLNAPL-KDGLDDFSLRGLFIPVI 248
Score = 77 (32.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/105 (22%), Positives = 47/105 (44%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D F VI + PE++++ G D+ DP G +S + + ++++
Sbjct: 234 GLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRS 293
Query: 419 LAQGRIILALEGGYNISSISYAMTLCTKALLGDPLPLLESDLDIN 463
+IL GGY + +++ T +G+ L ++DL N
Sbjct: 294 FNVPLMILG-GGGYTLPNVARCWCYETAIAVGEQL---DNDLPGN 334
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 138 (53.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HH KS G+C+ N+V L+ N + V +D D+HHG + F +V S
Sbjct: 201 HHCHKSHAAGFCYVNDVVLSINILRKN--LGSVFYLDLDLHHGDGVENAFKFSKKVATCS 258
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAEG 254
IHRY+ G F+P + E +NIP K + D+ + + +++ P+++
Sbjct: 259 IHRYDIG-FYPGTGSLKSSR--EN-----TYNIPTEKG-LNDSSMLWIIKEIVAPLISNF 309
Query: 255 G 255
G
Sbjct: 310 G 310
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 138 (53.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQQMFYNDNRVVYFS 194
HH KS G+C+ N+V L+ N + V +D D+HHG + F +V S
Sbjct: 201 HHCHKSHAAGFCYVNDVVLSINILRKN--LGSVFYLDLDLHHGDGVENAFKFSKKVATCS 258
Query: 195 IHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYMAVFHQVLLPMVAEG 254
IHRY+ G F+P + E +NIP K + D+ + + +++ P+++
Sbjct: 259 IHRYDIG-FYPGTGSLKSSR--EN-----TYNIPTEKG-LNDSSMLWIIKEIVAPLISNF 309
Query: 255 G 255
G
Sbjct: 310 G 310
>UNIPROTKB|I3LTU6 [details] [associations]
symbol:LOC100738481 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:FP700091
Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
Length = 275
Score = 95 (38.5 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
++ G A+ G HH G+C + ++ LA + + +SR I+D D H G
Sbjct: 128 VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGH 187
Query: 181 QQMFYNDNRVVYFSIH 196
++ F D RV ++
Sbjct: 188 ERDFMGDKRVYIMDVY 203
Score = 72 (30.4 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSP 406
D EY+ ++ + + P++V+ +AG D D LGG +SP
Sbjct: 230 DDEYLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSISP 274
Score = 46 (21.3 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA+ E++L HT
Sbjct: 49 KEEKLLTDSMLVEAREASDEDLLVVHT 75
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 95 (38.5 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
++ G A+ G HH G+C + ++ LA + + +SR I+D D H G
Sbjct: 128 VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGH 187
Query: 181 QQMFYNDNRVVYFSIH 196
++ F D RV ++
Sbjct: 188 ERDFMGDKRVYIMDVY 203
Score = 78 (32.5 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALA- 420
D EY+ ++ + + P++V+ +AG D D LGG +SP+ + +
Sbjct: 230 DDEYLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMVR 289
Query: 421 --QGRIILALEGGY 432
Q I++ GGY
Sbjct: 290 SLQVPILMVTSGGY 303
Score = 46 (21.3 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA+ E++L HT
Sbjct: 49 KEEKLLTDSMLVEAREASDEDLLVVHT 75
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 95 (38.5 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
++ G A+ G HH G+C + ++ LA + + +SR I+D D H G
Sbjct: 129 VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGH 188
Query: 181 QQMFYNDNRVVYFSIH 196
++ F D RV ++
Sbjct: 189 ERDFMGDKRVYIMDVY 204
Score = 75 (31.5 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D EY+ ++ + + P++V+ +AG D D LGG +SP +
Sbjct: 228 GTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFR 287
Query: 419 LAQGR---IILALEGGY 432
+ + I++ GGY
Sbjct: 288 VVRAHDIPILMVTSGGY 304
Score = 47 (21.6 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA++E++L HT
Sbjct: 50 KEEKLLSDGMLVEAREASEEDLLVVHT 76
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 95 (38.5 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
++ G A+ G HH G+C + ++ LA + + +SR I+D D H G
Sbjct: 129 VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGH 188
Query: 181 QQMFYNDNRVVYFSIH 196
++ F D RV ++
Sbjct: 189 ERDFMGDKRVYIMDVY 204
Score = 75 (31.5 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G D EY+ ++ + + P++V+ +AG D D LGG +SP +
Sbjct: 228 GTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFR 287
Query: 419 LAQGR---IILALEGGY 432
+ + I++ GGY
Sbjct: 288 VVRAHDIPILMVTSGGY 304
Score = 47 (21.6 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKHT 38
KE L+ ++ REA++E++L HT
Sbjct: 50 KEEKLLSDGMLVEAREASEEDLLVVHT 76
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 103 (41.3 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQ 181
+K+G A+ G HHA S G+CF+ ++ +A D +++ ++VD D H G
Sbjct: 130 LKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGHA 189
Query: 182 QMFYNDNRVVYFSI 195
+ F ++ V F +
Sbjct: 190 RDFADNPNVFVFDV 203
Score = 68 (29.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 383 ELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 432
+ ++ +AG D + DPLG K+SP+ + LA+ + I + GGY
Sbjct: 258 DFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGY 310
Score = 40 (19.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKH 37
KE+ L+ ++P T EE+ + H
Sbjct: 51 KEMNLITDETLVEPNLPTFEELTRVH 76
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 103 (41.3 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQATQ 181
+K+G A+ G HHA S G+CF+ ++ +A D +++ ++VD D H G
Sbjct: 130 LKHGWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAIVVDLDAHQGNGHA 189
Query: 182 QMFYNDNRVVYFSI 195
+ F ++ V F +
Sbjct: 190 RDFADNPNVFVFDV 203
Score = 68 (29.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 383 ELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKALAQGR---IILALEGGY 432
+ ++ +AG D + DPLG K+SP+ + LA+ + I + GGY
Sbjct: 258 DFIMFNAGTDCLLGDPLGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGY 310
Score = 40 (19.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 12 KELGLVQRCKFIQPREATQEEILKKH 37
KE+ L+ ++P T EE+ + H
Sbjct: 51 KEMNLITDETLVEPNLPTFEELTRVH 76
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 105 (42.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKA 418
G+ D +Y + V+ + FNP+ V++ G D DP+ ++P ++
Sbjct: 39 GIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQ 98
Query: 419 LAQGRIILALE-GGYNISSISYAMTLCTKALLGDPL 453
+IL E GGYN+++ + T T +LG L
Sbjct: 99 WQLATLILGGETGGYNLANTARCWTYLTGVILGKTL 134
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 39/132 (29%), Positives = 53/132 (40%)
Query: 123 IKNGMAVIRPPG--HHAMKSEYCGYCFFNNVALAAQHALDNTSVSRVLIVDWDVHHGQAT 180
+ G V P G HH G+C+ N+ LA AL +RV VD D HH
Sbjct: 113 VARGHRVFNPGGGTHHGFADRAGGFCYLNDPVLAIL-ALQRLGCARVAYVDIDAHHCDGV 171
Query: 181 QQMFYNDNRVVYFSIHRYEHGTFWPNLRESEYDHIGEGIGKGYNFNIPLNKTHMKDADYM 240
F V SIH WP E D G G N+P+ + + D+ Y
Sbjct: 172 ASAFQGSQTVRMISIHEARR---WPFTGALE-DDAG-----GAALNLPVARD-LNDSAYA 221
Query: 241 AVFHQVLLPMVA 252
+ +++LP VA
Sbjct: 222 LILDRLILPAVA 233
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 87 (35.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 123 IKNGMAVIRPPG-HHAMKSEYCGYCFFNNVALAAQHALDNTS-VSRVLIVDWDVHHGQAT 180
I G A+ G HH + G+C + ++ LA + + V+ I+D D H G
Sbjct: 140 IDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASATIIDLDAHQGNGH 199
Query: 181 QQMFYNDNRVVYFSIH 196
++ F D RV ++
Sbjct: 200 ERDFLEDRRVYIMDVY 215
Score = 82 (33.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 359 GMSDPEYIAAFQQVILPIAYQFN---PELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHW 415
G D EY+ Q+V L N P++++ +AG D DPLGG +SP+
Sbjct: 239 GTEDSEYL---QKVDLHSEGALNEARPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDEI 295
Query: 416 LKALAQGR---IILALEGGY 432
+ A+ R I++ GGY
Sbjct: 296 IFRAARRRGIPILMVTSGGY 315
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 80 (33.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 362 DPEYIAAFQQVILPIAYQFNPELVLVSAGYDACVNDPLGGCKVSPEAYAHFTHWLKAL-- 419
D Y+ ++ ++ +F P++V+ +AG D DPLG +S E + +
Sbjct: 248 DGFYLRQLKRCLMQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFR 307
Query: 420 AQG-RIILALEGGY 432
A G +++ L GGY
Sbjct: 308 ALGIPVVMLLSGGY 321
Score = 73 (30.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 135 HHAMKSEYCGYCFFNNVALAAQHALDNTS--VSRVLIVDWDVHHGQATQQMFYNDNRVVY 192
HH G+C + +++L + V R++IVD D H G ++ F N V
Sbjct: 158 HHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDFNNVAAVYI 217
Query: 193 FSIH 196
F ++
Sbjct: 218 FDMY 221
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 3 KHVNIKDPCKELGLVQRCKFIQPREATQEEILKKHTIEQIELL 45
KH++ K C +L L F +P E T++++ + HT E ++ L
Sbjct: 59 KHIH-KLLCAQLQLDDG-SFYEPTELTKDQLRRIHTREYLKSL 99
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 586 563 0.0010 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 211
No. of states in DFA: 621 (66 KB)
Total size of DFA: 346 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.72u 0.07s 42.79t Elapsed: 00:00:14
Total cpu time: 42.77u 0.08s 42.85t Elapsed: 00:00:16
Start: Thu Aug 15 13:30:53 2013 End: Thu Aug 15 13:31:09 2013
WARNINGS ISSUED: 1