BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14529
(59 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q63398|COE1_RAT Transcription factor COE1 OS=Rattus norvegicus GN=Ebf1 PE=1 SV=2
Length = 584
Score = 99.4 bits (246), Expect = 6e-21, Method: Composition-based stats.
Identities = 50/88 (56%), Positives = 56/88 (63%), Gaps = 29/88 (32%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI-----------------------------PSEGWT 31
MRRFQVV+ST V VDG +LAVSDN+ PSEGWT
Sbjct: 208 MRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAATPCIKAISPSEGWT 267
Query: 32 SGGATVIIVGDNFFDGLQVVFGTMLVWS 59
+GGATVII+GDNFFDGLQV+FGTMLVWS
Sbjct: 268 TGGATVIIIGDNFFDGLQVIFGTMLVWS 295
>sp|Q6P4K7|COE2_XENTR Transcription factor coe2 OS=Xenopus tropicalis GN=ebf2 PE=2 SV=1
Length = 575
Score = 97.4 bits (241), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 55/87 (63%), Gaps = 28/87 (32%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------PSEGWTS 32
MRRFQVV+ST V VDG +LAVSDN+ PSEGWT+
Sbjct: 208 MRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTT 267
Query: 33 GGATVIIVGDNFFDGLQVVFGTMLVWS 59
GGA VII+GDNFFDGLQVVFGTMLVWS
Sbjct: 268 GGAMVIIIGDNFFDGLQVVFGTMLVWS 294
>sp|B7ZRJ4|COE2A_XENLA Transcription factor coe2-A OS=Xenopus laevis GN=ebf2-a PE=2 SV=1
Length = 575
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 55/87 (63%), Gaps = 28/87 (32%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------PSEGWTS 32
MRRFQVV+ST V VDG +LAVSDN+ PSEGWT+
Sbjct: 208 MRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTT 267
Query: 33 GGATVIIVGDNFFDGLQVVFGTMLVWS 59
GGA VII+GDNFFDGLQVVFGTMLVWS
Sbjct: 268 GGAMVIIIGDNFFDGLQVVFGTMLVWS 294
>sp|Q9HAK2|COE2_HUMAN Transcription factor COE2 OS=Homo sapiens GN=EBF2 PE=1 SV=4
Length = 575
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 55/87 (63%), Gaps = 28/87 (32%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------PSEGWTS 32
MRRFQVV+ST V VDG +LAVSDN+ PSEGWT+
Sbjct: 207 MRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTT 266
Query: 33 GGATVIIVGDNFFDGLQVVFGTMLVWS 59
GGA VII+GDNFFDGLQVVFGTMLVWS
Sbjct: 267 GGAMVIIIGDNFFDGLQVVFGTMLVWS 293
>sp|Q08DL5|COE2_BOVIN Transcription factor COE2 OS=Bos taurus GN=EBF2 PE=2 SV=1
Length = 575
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 55/87 (63%), Gaps = 28/87 (32%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------PSEGWTS 32
MRRFQVV+ST V VDG +LAVSDN+ PSEGWT+
Sbjct: 207 MRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTT 266
Query: 33 GGATVIIVGDNFFDGLQVVFGTMLVWS 59
GGA VII+GDNFFDGLQVVFGTMLVWS
Sbjct: 267 GGAMVIIIGDNFFDGLQVVFGTMLVWS 293
>sp|O08792|COE2_MOUSE Transcription factor COE2 OS=Mus musculus GN=Ebf2 PE=1 SV=4
Length = 575
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 55/87 (63%), Gaps = 28/87 (32%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------PSEGWTS 32
MRRFQVV+ST V VDG +LAVSDN+ PSEGWT+
Sbjct: 207 MRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCIKAISPSEGWTT 266
Query: 33 GGATVIIVGDNFFDGLQVVFGTMLVWS 59
GGA VII+GDNFFDGLQVVFGTMLVWS
Sbjct: 267 GGAMVIIIGDNFFDGLQVVFGTMLVWS 293
>sp|Q07802|COE1_MOUSE Transcription factor COE1 OS=Mus musculus GN=Ebf1 PE=1 SV=1
Length = 591
Score = 96.7 bits (239), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/95 (52%), Positives = 56/95 (58%), Gaps = 36/95 (37%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------------- 25
MRRFQVV+ST V VDG +LAVSDN+
Sbjct: 208 MRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTPSYLEHATPCIKAI 267
Query: 26 -PSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
PSEGWT+GGATVII+GDNFFDGLQV+FGTMLVWS
Sbjct: 268 SPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWS 302
>sp|Q9UH73|COE1_HUMAN Transcription factor COE1 OS=Homo sapiens GN=EBF1 PE=1 SV=2
Length = 591
Score = 96.7 bits (239), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/95 (52%), Positives = 56/95 (58%), Gaps = 36/95 (37%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------------- 25
MRRFQVV+ST V VDG +LAVSDN+
Sbjct: 208 MRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTPSYLEHATPCIKAI 267
Query: 26 -PSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
PSEGWT+GGATVII+GDNFFDGLQV+FGTMLVWS
Sbjct: 268 SPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWS 302
>sp|O08791|COE3_MOUSE Transcription factor COE3 OS=Mus musculus GN=Ebf3 PE=2 SV=1
Length = 596
Score = 96.3 bits (238), Expect = 5e-20, Method: Composition-based stats.
Identities = 51/96 (53%), Positives = 56/96 (58%), Gaps = 37/96 (38%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------------- 25
MRRFQVV+ST V VDG +LAVSDN+
Sbjct: 208 MRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENATPCIKA 267
Query: 26 --PSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
PSEGWT+GGATVII+GDNFFDGLQVVFGTMLVWS
Sbjct: 268 ISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWS 303
>sp|Q9H4W6|COE3_HUMAN Transcription factor COE3 OS=Homo sapiens GN=EBF3 PE=1 SV=2
Length = 596
Score = 96.3 bits (238), Expect = 5e-20, Method: Composition-based stats.
Identities = 51/96 (53%), Positives = 56/96 (58%), Gaps = 37/96 (38%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------------- 25
MRRFQVV+ST V VDG +LAVSDN+
Sbjct: 208 MRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENATPCIKA 267
Query: 26 --PSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
PSEGWT+GGATVII+GDNFFDGLQVVFGTMLVWS
Sbjct: 268 ISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWS 303
>sp|O73742|COE3_XENLA Transcription factor COE3 OS=Xenopus laevis GN=coe3 PE=2 SV=2
Length = 598
Score = 96.3 bits (238), Expect = 6e-20, Method: Composition-based stats.
Identities = 51/97 (52%), Positives = 56/97 (57%), Gaps = 38/97 (39%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------------- 25
MRRFQVV+ST V VDG +LAVSDN+
Sbjct: 208 MRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTAPSYLENVATPCIK 267
Query: 26 ---PSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
PSEGWT+GGATVII+GDNFFDGLQVVFGTMLVWS
Sbjct: 268 AISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWS 304
>sp|B7ZRI2|COE2B_XENLA Transcription factor coe2-B OS=Xenopus laevis GN=ebf2-b PE=2 SV=1
Length = 580
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/95 (52%), Positives = 55/95 (57%), Gaps = 36/95 (37%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------------- 25
MRRFQVV+ST V VDG +LAVSDN+
Sbjct: 205 MRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTDPSLEYATPCIKAI 264
Query: 26 -PSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
PSEGWT+GGA VII+GDNFFDGLQVVFGTMLVWS
Sbjct: 265 SPSEGWTTGGAMVIIIGDNFFDGLQVVFGTMLVWS 299
>sp|O93375|COE2_DANRE Transcription factor COE2 OS=Danio rerio GN=coe2 PE=2 SV=1
Length = 579
Score = 93.6 bits (231), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/95 (49%), Positives = 56/95 (58%), Gaps = 36/95 (37%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------------- 25
MRRFQVV+ST V VDGP+LA+SDN+
Sbjct: 206 MRRFQVVLSTTVCVDGPVLAISDNMFVHNNSKHGRRSRRMDPNETVENNMEYATPCIKAI 265
Query: 26 -PSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
PSEGWT+GGA VI++G+NFFDGLQVVFG+MLVWS
Sbjct: 266 SPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLVWS 300
>sp|Q9BQW3|COE4_HUMAN Transcription factor COE4 OS=Homo sapiens GN=EBF4 PE=2 SV=2
Length = 602
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 54/88 (61%), Gaps = 29/88 (32%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI-----------------------------PSEGWT 31
MRRFQVV+ST V VDG +LAVSDN+ P EGWT
Sbjct: 209 MRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAATPCIKAISPGEGWT 268
Query: 32 SGGATVIIVGDNFFDGLQVVFGTMLVWS 59
+GGATVI++GDNFFDGLQVVFG +LVWS
Sbjct: 269 TGGATVIVIGDNFFDGLQVVFGNVLVWS 296
>sp|Q8K4J2|COE4_MOUSE Transcription factor COE4 OS=Mus musculus GN=Ebf4 PE=2 SV=1
Length = 599
Score = 79.0 bits (193), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/88 (53%), Positives = 54/88 (61%), Gaps = 29/88 (32%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI-----------------------------PSEGWT 31
MRRFQVV+ST V VDG +LAVSDN+ P EGWT
Sbjct: 209 MRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAATPCIKAISPGEGWT 268
Query: 32 SGGATVIIVGDNFFDGLQVVFGTMLVWS 59
+GGATVII+GDNFFDGLQVVFG +L+WS
Sbjct: 269 TGGATVIIIGDNFFDGLQVVFGNVLLWS 296
>sp|P56721|COLL_DROME Transcription factor collier OS=Drosophila melanogaster GN=kn PE=2
SV=2
Length = 575
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
Query: 9 STQVGVDGPLLAVSDNI----PSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
ST G+ PL + I PSEGWT+GGATVIIVGDNFFDGLQVVFGTMLVWS
Sbjct: 285 STYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWS 339
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/25 (88%), Positives = 24/25 (96%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI 25
MRRFQVVISTQV VDGPLLA+SDN+
Sbjct: 224 MRRFQVVISTQVAVDGPLLAISDNM 248
>sp|Q93705|UNC3_CAEEL Transcription factor unc-3 OS=Caenorhabditis elegans GN=unc-3 PE=2
SV=3
Length = 491
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 40/94 (42%)
Query: 1 MRRFQVVISTQVGVDGPLLAVSDNI----------------------------------- 25
MRRFQVV+ + +DGPLLAVSDN+
Sbjct: 211 MRRFQVVLCSSARIDGPLLAVSDNMFVHNNSKHGRRTKRTDASDDSEYSESAELPSSVPV 270
Query: 26 -----PSEGWTSGGATVIIVGDNFFDGLQVVFGT 54
PSEGW GG V+++G+NFF+GLQV FGT
Sbjct: 271 IKALFPSEGWIQGGTQVVLIGENFFEGLQVAFGT 304
>sp|P40578|MGA2_YEAST Protein MGA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=MGA2 PE=1 SV=1
Length = 1113
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 18 LLAVSDNIPSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
L +++ IPS+G +GG V ++G NF DGL V FG+ L S
Sbjct: 529 LPSINRVIPSQGPINGGIEVTLLGCNFKDGLSVKFGSNLALS 570
>sp|O13987|YEG5_SCHPO Ankyrin and IPT/TIG repeat-containing protein C26H5.05
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC26H5.05 PE=4 SV=1
Length = 1151
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 21 VSDNIPSEGWTSGGATVIIVGDNFFDGLQVVFG 53
+S IP++G GG V I+G NFF+GL +FG
Sbjct: 660 ISRIIPNKGSIMGGYEVTILGANFFNGLVCLFG 692
>sp|P35210|SPT23_YEAST Protein SPT23 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SPT23 PE=1 SV=2
Length = 1082
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 25 IPSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWS 59
IP++G +GG V ++G F GL + FG + S
Sbjct: 514 IPAQGSINGGIEVTLLGSKFKQGLIIKFGENIALS 548
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,239,789
Number of Sequences: 539616
Number of extensions: 681429
Number of successful extensions: 1433
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1395
Number of HSP's gapped (non-prelim): 39
length of query: 59
length of database: 191,569,459
effective HSP length: 32
effective length of query: 27
effective length of database: 174,301,747
effective search space: 4706147169
effective search space used: 4706147169
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)