Query psy14531
Match_columns 222
No_of_seqs 142 out of 1377
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 22:16:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o8e_B Membrane cofactor prote 100.0 3E-41 1E-45 274.1 20.2 199 3-219 42-252 (252)
2 1qub_A Protein (human BETA2-gl 100.0 1.6E-39 5.3E-44 272.4 20.9 198 3-220 43-245 (319)
3 1ok3_A CD55, CR, DAF, compleme 100.0 2.4E-39 8.1E-44 263.2 18.3 196 3-218 45-253 (254)
4 2xrb_A Complement regulatory p 100.0 1.7E-39 5.8E-44 268.8 16.0 197 3-218 77-290 (290)
5 3iyp_F Complement decay-accele 100.0 6.4E-38 2.2E-42 267.7 20.5 199 3-221 77-288 (381)
6 2wii_C H factor 1, complement 100.0 2.3E-38 7.8E-43 260.4 17.1 196 3-219 49-252 (277)
7 1ntj_A Complement receptor rel 100.0 1.4E-37 4.8E-42 260.7 20.4 198 3-219 44-258 (320)
8 2c8i_E CD55, complement decay- 100.0 1.4E-37 4.6E-42 260.4 19.6 196 3-218 108-316 (316)
9 1rid_A Complement control prot 100.0 7E-39 2.4E-43 259.0 11.0 191 3-218 47-244 (244)
10 1ntj_A Complement receptor rel 100.0 4.6E-36 1.6E-40 251.5 20.3 197 3-217 103-320 (320)
11 1ntl_A CRRY-IG; immunology, co 100.0 3.2E-36 1.1E-40 269.2 20.0 199 3-219 42-257 (551)
12 1qub_A Protein (human BETA2-gl 100.0 4.9E-36 1.7E-40 251.2 15.2 196 3-219 101-309 (319)
13 2c8i_E CD55, complement decay- 100.0 2.9E-35 9.8E-40 246.3 19.1 200 3-220 44-255 (316)
14 1ntl_A CRRY-IG; immunology, co 100.0 2.4E-35 8.1E-40 263.6 19.7 201 3-219 101-319 (551)
15 3erb_A Complement C2; C3/C5 co 100.0 8.1E-35 2.8E-39 232.2 18.6 174 23-218 2-186 (223)
16 3o8e_B Membrane cofactor prote 100.0 6.8E-34 2.3E-38 230.8 18.1 178 25-220 1-193 (252)
17 2wii_C H factor 1, complement 100.0 1.5E-33 5E-38 231.8 15.8 179 22-219 5-195 (277)
18 2gsx_A Complement receptor typ 100.0 5E-33 1.7E-37 262.2 21.4 201 3-218 738-950 (951)
19 2gsx_A Complement receptor typ 100.0 6E-33 2.1E-37 261.6 20.9 211 3-219 369-640 (951)
20 3sw0_X H factor 1, complement 100.0 8.9E-34 3E-38 220.5 12.5 176 22-218 2-187 (188)
21 1haq_A Complement factor H; im 100.0 1.8E-32 6.2E-37 263.3 21.3 197 3-220 44-248 (1213)
22 1rid_A Complement control prot 100.0 3E-33 1E-37 226.0 12.3 173 24-220 1-186 (244)
23 1ok3_A CD55, CR, DAF, compleme 100.0 1.9E-32 6.4E-37 222.6 16.4 180 23-220 2-192 (254)
24 1haq_A Complement factor H; im 100.0 2.8E-32 9.4E-37 262.0 19.7 194 3-220 531-730 (1213)
25 2xrb_A Complement regulatory p 100.0 4.5E-32 1.5E-36 224.3 14.1 177 22-218 35-229 (290)
26 2uwn_A H factor 1, human compl 100.0 7.6E-33 2.6E-37 215.1 7.3 173 22-217 3-187 (187)
27 3hrz_D Complement factor B; se 100.0 4.3E-31 1.5E-35 243.2 19.3 177 19-219 6-196 (741)
28 2q7z_A Complement receptor typ 100.0 4.7E-31 1.6E-35 262.3 20.4 199 3-219 550-765 (1931)
29 3iyp_F Complement decay-accele 100.0 8.9E-31 3E-35 223.6 16.0 181 22-220 33-224 (381)
30 2q7z_A Complement receptor typ 100.0 1.7E-30 6E-35 258.2 19.7 199 2-219 940-1155(1931)
31 3erb_A Complement C2; C3/C5 co 100.0 7.6E-29 2.6E-33 197.6 14.9 154 4-171 41-204 (223)
32 3gov_A MAsp-1; complement, ser 100.0 5E-28 1.7E-32 182.4 14.3 136 19-166 2-152 (155)
33 2qy0_A Complement C1R subcompo 99.9 1.5E-26 5.3E-31 175.0 15.0 133 23-167 3-157 (159)
34 1gkn_A Complement receptor typ 99.9 2E-25 6.9E-30 162.9 11.0 121 94-220 4-128 (128)
35 1gkg_A Complement receptor typ 99.9 1.9E-25 6.4E-30 164.7 10.7 122 19-154 1-136 (136)
36 3hrz_D Complement factor B; se 99.9 1.2E-25 4.2E-30 206.8 11.7 151 3-167 47-209 (741)
37 3t5o_A Complement component C6 99.9 2.8E-25 9.5E-30 208.0 13.9 166 24-216 567-737 (913)
38 1ly2_A CD21, complement recept 99.9 5.1E-25 1.7E-29 161.1 11.4 119 94-219 2-130 (130)
39 1gkn_A Complement receptor typ 99.9 3.2E-25 1.1E-29 161.8 9.9 117 22-154 3-125 (128)
40 2uwn_A H factor 1, human compl 99.9 6.5E-26 2.2E-30 175.9 4.7 131 3-154 51-187 (187)
41 1h03_P Complement decay-accele 99.9 1.8E-24 6E-29 157.2 11.6 117 95-218 2-125 (125)
42 1h03_P Complement decay-accele 99.9 1.3E-24 4.4E-29 158.0 10.8 117 23-154 1-124 (125)
43 1gkg_A Complement receptor typ 99.9 2E-24 6.8E-29 159.2 11.7 117 94-217 5-136 (136)
44 1ly2_A CD21, complement recept 99.9 1.8E-24 6.3E-29 158.1 11.2 122 23-155 2-129 (130)
45 3gov_A MAsp-1; complement, ser 99.9 3.3E-24 1.1E-28 161.5 12.8 121 94-220 6-143 (155)
46 3t5o_A Complement component C6 99.9 3.2E-25 1.1E-29 207.6 5.8 191 3-216 598-795 (913)
47 2a55_A C4B-binding protein; co 99.9 1.3E-24 4.4E-29 159.6 5.9 121 94-220 1-127 (133)
48 2qy0_A Complement C1R subcompo 99.9 3.5E-23 1.2E-27 156.5 13.8 126 94-220 3-147 (159)
49 2aty_A Complement receptor chi 99.9 3.5E-23 1.2E-27 176.6 14.8 133 23-166 2-140 (376)
50 3sw0_X H factor 1, complement 99.9 9E-24 3.1E-28 163.9 9.9 133 3-155 44-187 (188)
51 2a55_A C4B-binding protein; co 99.9 1.1E-24 3.6E-29 160.1 3.8 116 23-154 1-124 (133)
52 1zjk_A Mannan-binding lectin s 99.9 1.6E-22 5.6E-27 174.1 13.2 141 9-162 2-156 (403)
53 3r62_A H factor 1, complement 99.9 4E-23 1.4E-27 150.9 6.7 120 93-219 4-129 (129)
54 3r62_A H factor 1, complement 99.9 3.6E-22 1.2E-26 145.8 7.0 117 21-155 3-128 (129)
55 2aty_A Complement receptor chi 99.9 2.7E-21 9.3E-26 164.9 13.2 120 94-220 2-131 (376)
56 2yby_A Complement factor H; im 99.9 1.1E-22 3.7E-27 147.6 2.8 114 94-217 3-123 (124)
57 2yby_A Complement factor H; im 99.8 7.6E-22 2.6E-26 143.1 3.3 112 23-154 3-123 (124)
58 4ayi_A H factor 1, complement 99.8 2.3E-21 7.8E-26 140.7 3.9 113 22-154 4-125 (125)
59 4ayi_A H factor 1, complement 99.8 8E-21 2.7E-25 137.8 2.6 114 94-217 5-125 (125)
60 1zjk_A Mannan-binding lectin s 99.8 1.4E-18 4.8E-23 149.5 13.2 133 70-220 4-151 (403)
61 1gpz_A Complement C1R componen 99.8 9.6E-18 3.3E-22 144.0 13.7 127 23-161 1-149 (399)
62 2b5i_D Interleukin-2 receptor 99.7 4.1E-17 1.4E-21 126.5 9.4 117 95-221 2-168 (217)
63 2ehf_A CUB and sushi domain-co 99.7 1.8E-16 6E-21 104.0 6.7 68 12-81 1-69 (73)
64 2ehf_A CUB and sushi domain-co 99.7 2.5E-16 8.5E-21 103.2 7.3 71 72-158 2-72 (73)
65 1gpz_A Complement C1R componen 99.7 1E-15 3.5E-20 131.4 13.0 126 94-220 1-145 (399)
66 2b5i_D Interleukin-2 receptor 99.6 7.7E-16 2.6E-20 119.4 9.0 124 25-154 3-164 (217)
67 2yra_A Seizure 6-like protein 99.6 1.4E-15 4.8E-20 99.9 6.0 69 20-100 3-72 (74)
68 2yra_A Seizure 6-like protein 99.5 4.1E-14 1.4E-18 92.8 7.8 67 93-161 5-72 (74)
69 3tvj_A Mannan-binding lectin s 99.5 1.3E-13 4.6E-18 93.0 8.9 69 94-162 6-81 (86)
70 3tvj_A Mannan-binding lectin s 99.4 1.8E-13 6.3E-18 92.3 7.1 70 19-101 2-81 (86)
71 1srz_A Gamma-aminobutyric acid 99.4 7E-14 2.4E-18 90.2 4.7 64 151-219 2-68 (68)
72 1srz_A Gamma-aminobutyric acid 99.4 2.3E-13 8E-18 87.7 5.8 60 95-155 7-67 (68)
73 4aqb_A Mannan-binding lectin s 99.1 5.1E-11 1.8E-15 100.8 5.3 78 19-108 276-360 (361)
74 4aqb_A Mannan-binding lectin s 99.1 6.2E-10 2.1E-14 94.1 10.6 80 88-169 274-360 (361)
75 2psm_F Interleukin-15 receptor 98.5 2.2E-07 7.6E-12 59.8 5.1 59 92-154 7-72 (78)
76 2psm_F Interleukin-15 receptor 98.5 1.9E-07 6.5E-12 60.2 4.7 62 155-220 9-75 (78)
77 1elv_A Complement C1S componen 98.1 7.7E-06 2.6E-10 68.1 7.8 67 94-163 2-76 (333)
78 2z3q_B Interleukin-15 receptor 98.0 2.4E-06 8.3E-11 57.7 2.8 61 155-219 6-71 (107)
79 2z3q_B Interleukin-15 receptor 98.0 7.7E-06 2.6E-10 55.2 4.9 58 93-154 5-69 (107)
80 1elv_A Complement C1S componen 97.8 3.5E-05 1.2E-09 64.1 6.5 58 23-81 2-68 (333)
81 4f4o_C Haptoglobin; globin fol 97.6 0.00013 4.6E-09 61.0 7.0 59 94-163 31-96 (347)
82 4f4o_C Haptoglobin; globin fol 97.3 0.00045 1.5E-08 57.8 6.4 58 23-102 31-96 (347)
83 1md8_A C1R complement serine p 97.2 0.0017 5.8E-08 53.8 9.2 67 95-161 1-81 (329)
84 1md8_A C1R complement serine p 96.1 0.017 5.8E-07 47.7 7.5 58 24-81 1-75 (329)
85 4ers_A GL-R, glucagon receptor 76.9 1.2 4.3E-05 29.6 2.0 32 117-148 45-81 (96)
86 2l27_A Seven transmembrane hel 74.8 0.52 1.8E-05 30.7 -0.3 32 117-148 35-71 (84)
87 3n7s_A Calcitonin gene-related 74.7 1.6 5.5E-05 30.1 2.1 32 117-148 61-95 (115)
88 2qkh_A Glucose-dependent insul 72.1 2.2 7.5E-05 30.3 2.4 43 116-160 71-118 (135)
89 3c5t_A Glucagon-like peptide 1 69.4 2.5 8.6E-05 29.4 2.2 31 117-147 53-88 (122)
90 1u34_A CRFR2B, corticotropin r 65.4 1.5 5E-05 30.5 0.3 41 117-159 61-106 (119)
91 3n7s_A Calcitonin gene-related 64.8 3.8 0.00013 28.2 2.3 34 177-211 62-95 (115)
92 2x57_A Vasoactive intestinal p 61.9 4.3 0.00015 28.0 2.1 33 117-150 64-100 (116)
93 2xdg_A Growth hormone-releasin 61.5 3 0.0001 27.5 1.2 32 117-149 38-73 (92)
94 2jod_A Pituitary adenylate cyc 60.3 5.6 0.00019 26.9 2.5 34 117-151 52-91 (106)
95 2xtt_A Protease inhibitor SGPI 58.7 14 0.00049 19.6 3.4 26 51-81 3-29 (36)
96 4ers_A GL-R, glucagon receptor 58.7 4.4 0.00015 26.9 1.7 36 176-211 45-81 (96)
97 1u34_A CRFR2B, corticotropin r 55.3 5.3 0.00018 27.7 1.7 30 178-211 63-97 (119)
98 2qkh_A Glucose-dependent insul 55.3 6.5 0.00022 27.8 2.2 31 176-210 72-107 (135)
99 2jod_A Pituitary adenylate cyc 52.8 9.2 0.00032 25.8 2.6 37 177-214 53-91 (106)
100 2x57_A Vasoactive intestinal p 51.6 6 0.0002 27.3 1.5 38 176-214 64-101 (116)
101 3c5t_A Glucagon-like peptide 1 50.9 10 0.00035 26.2 2.6 35 176-210 53-88 (122)
102 3n94_A Fusion protein of malto 38.5 11 0.00037 32.0 1.4 35 116-151 417-457 (475)
103 1wo9_A HI-1, trypsin inhibitor 24.8 64 0.0022 16.9 2.5 22 126-147 4-26 (35)
104 3h3g_A Fusion protein of malto 24.6 39 0.0013 29.2 2.6 32 117-148 468-502 (539)
105 3n94_A Fusion protein of malto 24.3 24 0.00083 29.8 1.2 38 176-214 418-457 (475)
106 4dlo_A Brain-specific angiogen 21.0 27 0.00091 29.1 0.7 62 18-81 6-75 (382)
No 1
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=100.00 E-value=3e-41 Score=274.10 Aligned_cols=199 Identities=26% Similarity=0.528 Sum_probs=179.9
Q ss_pred CceEeccCCccCC-CCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCC
Q psy14531 3 HPVFRVSQGQWSG-EVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIP 77 (222)
Q Consensus 3 ~~~~c~~~g~Ws~-~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p 77 (222)
.+++|+.+|+|+. ..|.|+++.|+.|+. +||.+......|.+|++|+|+|+.||.|.|+..++|+.+| +|+.+.|
T Consensus 42 ~~~~C~~~g~Ws~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P 121 (252)
T 3o8e_B 42 THTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPP 121 (252)
T ss_dssp CEEEBCTTSSBCCCCSTTEEECBCCCCCCCTTEEEEETTSSSBTTCEEEEEECTTEEEESCSEEEEEESSSCEEESSCCC
T ss_pred CeEEECCCCcCCCCCCCceeeeECcCCCCCCCcEEeecCCCccCCCEEEEECCCCCeECCCCEEEEeCCCCCCeeCCCCC
Confidence 5799999999998 589999999999887 9999987767799999999999999999999999999888 8999999
Q ss_pred ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCC-----CCEEcCCCeEEeCcCCeeeCCCCc
Q psy14531 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND-----RHHLLGEETIVCTETGRWSRAPPR 152 (222)
Q Consensus 78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~-----gy~~~g~~~~~C~~~g~Ws~~~p~ 152 (222)
.|+. +.|+.|+.+.||.+... ....|.+|++|+|+|+. ||.|.|...++|+++|+|++..|.
T Consensus 122 ~C~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~g~~~~gy~l~G~~~~~C~~~G~Ws~~~P~ 188 (252)
T 3o8e_B 122 ICEK------------VLCTPPPKIKNGKHTFS-EVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPE 188 (252)
T ss_dssp EEEE------------CEECCCCCCTTEEESST-TCCCEETTCEEEEEECCCSSSSCCEEESCSEEEBCTTSSBSSCCCE
T ss_pred eEee------------eEcCCCCCCCCCcEecc-CCceecCCCEEEEEeCCCCCCCCeEEeCCCceEECCCCeECCCCCE
Confidence 9999 89999999999988643 35678999999999998 899999999999999999999999
Q ss_pred ee-ecCCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 153 CK-ARCEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 153 C~-~~C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
|+ +.|..| .+.||.+.. .+..|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++++|+|+++
T Consensus 189 C~~v~C~~P-~~~ng~~~~~~~~~~~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~v 252 (252)
T 3o8e_B 189 CKVVKCRFP-VVENGKQISGFGKKFYYKATVMFECDKGFYLDGS----DTIVCDSNSTWDPPVPKCLKV 252 (252)
T ss_dssp EECCCBCCC-CCTTEEEEECCCSCBCTTCEEEEEECTTEEEESC----SEEEECTTSCEESCCCEEEEC
T ss_pred EeeeecCCC-cccCCcEecCCCCccccCCEEEEEeCCCCEEcCC----CcEEECCCCeECCCCCeeeeC
Confidence 99 679987 688998764 345688899999999999999988 889999999999999999875
No 2
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=100.00 E-value=1.6e-39 Score=272.41 Aligned_cols=198 Identities=27% Similarity=0.603 Sum_probs=178.1
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA 81 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~ 81 (222)
..++|+.+|.|+...|.|+++.|+.|.. +||.+.. ..+.+|++|+|+|+.||.|.|+..++|+.+|+|+.+.|.|+.
T Consensus 43 ~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG~~~~--~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~ 120 (319)
T 1qub_A 43 RKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRY--TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAP 120 (319)
T ss_dssp EEEECCTTSCCCCCCCCEEECBCCCCCCCTTEEEEC--SCSBTTCEEEEEECTTEEEESCSEEEECTTSCEESCCCEEEE
T ss_pred ceEEECCCCEECCCCCeECccCCcCCCCCCCccEec--CCcccCCEEEEECCCCceeCCCCceEECCCCeECCCCCCCcc
Confidence 3689999999999889999999999987 9999874 468899999999999999999999999999999999999999
Q ss_pred cceeeeecccccccCCCCCCCCCceEEeCC--CCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ecCC
Q psy14531 82 FFFFFFFFFFNPVHCPVPALPLNGHLIEDP--TGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCE 158 (222)
Q Consensus 82 ~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~--~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~ 158 (222)
+.|+.|+.+.||.+.... ....|.+|++|+|+|+.||.|.|+..++|+++|+|+. .|.|+ +.|+
T Consensus 121 ------------~~C~~p~~~~~g~~~~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~Ws~-~P~C~~v~C~ 187 (319)
T 1qub_A 121 ------------IICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LPECREVKCP 187 (319)
T ss_dssp ------------CEECCCCCCTTEEEEECCCSBTTBEETTCEEEEEECTTEEEESCSEEEBCTTSSBSC-CCEEEECEEC
T ss_pred ------------CcCCCCCCCCCceEEecccCCCCceecCCEEEEEeCCCceecCCCeEEECCCCeECC-CCceeccCCC
Confidence 899999999999886532 1356889999999999999999999999999999998 89999 6799
Q ss_pred CCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531 159 YPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT 220 (222)
Q Consensus 159 ~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~ 220 (222)
.|+.+.||.+... +..|.+|+.|+|.|++||.+.|+ ..++|+.+|+|+. +|+|++.+
T Consensus 188 ~p~~~~nG~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~Ws~-~P~C~~~C 245 (319)
T 1qub_A 188 FPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGP----EEIECTKLGNWSA-MPSCKASC 245 (319)
T ss_dssp CCCCCTTEEEECCSCSSEETTCEEEEEECTTEEESSC----SEEEBCTTSSBSC-CCCEEECB
T ss_pred CCCCCCCCeEecCCCCccccCCEEEEEcCCCCEECCC----CCeEECCCCcCCC-CCCccCcC
Confidence 9999999998743 45677899999999999999988 7899999999997 79998754
No 3
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=100.00 E-value=2.4e-39 Score=263.24 Aligned_cols=196 Identities=27% Similarity=0.545 Sum_probs=174.7
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEec---cCCcccccEEEEEcCCCCeEeC--CCceEeCCCCeeeCCC
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLV---EQNNTYRGHAIFQCSWGYQLKG--PPDIVCQKNGSWSGAI 76 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~---~~~~~~g~~~~~~C~~gy~l~G--~~~~~C~~~g~W~~~~ 76 (222)
.+++|+.+|+|+...|.|+ +.|+.|+. .||.+... ...|.+|+.|+|+|+.||.|.| +..++|+.+|+|+.+.
T Consensus 45 ~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~C~~~g~Ws~~~ 123 (254)
T 1ok3_A 45 DSVICLKGSQWSDIEEFCN-RSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAV 123 (254)
T ss_dssp CEEEEETTTEECCCCCCEE-CCCCSCCCCSSEEECTTGGGCCCCCTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCC
T ss_pred CEEEeCCCCCCCCCCCcCC-CCCCCCCCCCcccccccccccCcCCCCCEEEEEeCCCceeCCCCCCeEEECCCCeECCCC
Confidence 5799999999999889997 58999887 88887642 3457889999999999999986 6789999999999999
Q ss_pred CceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCce
Q psy14531 77 PECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRC 153 (222)
Q Consensus 77 p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C 153 (222)
|.|+. +.|+.|+.+.||.+.. ...+.+|++|+|+|+.||.|.|...++|+.+| +|+...|.|
T Consensus 124 p~C~~------------~~C~~p~~~~nG~~~~---~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C 188 (254)
T 1ok3_A 124 EFCKK------------KSCPNPGEIRNGQIDV---PGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC 188 (254)
T ss_dssp CSEEE------------CBCCCCCCCTTEEEEC---TTCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEE
T ss_pred CeeCc------------cCCcCCCCCCCCEEEc---CCCcEEcCEEEEECCCCceeCCCcceEEEeCCCcccccCCCCcc
Confidence 99998 8999999999998863 34678999999999999999999999999988 999989999
Q ss_pred e-ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeC---CCCcccCCCCceee
Q psy14531 154 K-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHCTN 218 (222)
Q Consensus 154 ~-~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~---~~G~W~~~~p~C~~ 218 (222)
+ +.|+.|+.+.||.+......|.+|+.|+|.|++||.+.|+ ..++|+ ++|+|++++|+|++
T Consensus 189 ~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~~~~G~Ws~~~P~C~~ 253 (254)
T 1ok3_A 189 REIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGE----HSIYCTVNNDEGEWSGPPPECRG 253 (254)
T ss_dssp EECBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCEEEEE----SEEEEEEETTEEEESSCCCEEEC
T ss_pred ccccCCCCCCCCCceEecCCCcccCCCEEEEECCCCCeEcCC----CceEEeccCCCCEECCCCCCccc
Confidence 9 6999999999999876556778899999999999999998 789998 37999999999975
No 4
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=100.00 E-value=1.7e-39 Score=268.76 Aligned_cols=197 Identities=25% Similarity=0.642 Sum_probs=176.6
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCc
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPE 78 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~ 78 (222)
..++|+.+|.|+...|.|+++.|+.|.. +||.+... ..+.+|+.|+|+|+.||.|.|+..++|+.+| +|+.+.|.
T Consensus 77 ~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~G~~v~y~C~~GY~l~G~~~~~C~~~g~~~~Ws~~~P~ 155 (290)
T 2xrb_A 77 FSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVN-TDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPI 155 (290)
T ss_dssp EEEEECTTSCEECCTTCSCBCBCCCCCCCTTEEEEES-SCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCE
T ss_pred CeEEECCCCeECCCCCCcCcCCCcCCCCCCCceEecC-CCcccCCEEEEECCCCceeCCCCceEEEeCCCCceeCCCCCe
Confidence 4689999999998889999999999987 99998754 5689999999999999999999999999887 89999999
Q ss_pred eeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeC
Q psy14531 79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSR 148 (222)
Q Consensus 79 C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~ 148 (222)
|+. +.|+.|+.+.||.+... ....|.+|++|+|+|+.| |.|.|...++|+.+ |+|++
T Consensus 156 C~~------------v~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~ 222 (290)
T 2xrb_A 156 CES------------IPCEIPPSIPNGDFFSP-NREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSG 222 (290)
T ss_dssp EEE------------CEECCCCCBTTEEEECS-STTCEETTCEEEEEECBCTTSCBCEEEESCSEEEEEESSSSSEEESS
T ss_pred ecc------------ccCCCCCCCCCCeEecC-CCCccccCCEEEEEeCCCCCCcceEEecCCceeEecCCCCCCCeECC
Confidence 999 89999999999988642 356789999999999999 99999999999987 99999
Q ss_pred CCCceee--cCCCCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531 149 APPRCKA--RCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218 (222)
Q Consensus 149 ~~p~C~~--~C~~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~ 218 (222)
..|.|+. .|..| .+.||.+... +..|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++++|+|++
T Consensus 223 ~~P~C~~~~~C~~p-~~~nG~~~~~~~~~y~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~a 290 (290)
T 2xrb_A 223 PPPQCIELNKCTPP-HVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGD----SSVYCRSLNRWEPQLPSCAA 290 (290)
T ss_dssp CCCEEEETTEECCC-CCTTEEECSCCCSSEETTCEEEEEECTTCEEESC----SEEEEETTTEEESCCCEEEC
T ss_pred CCCcccccccCCCC-CCCCCeEecCCCCcccCCCEEEEEcCCCCEECCC----CCeEECCCCeECCCCCeeeC
Confidence 9999984 89874 6789988743 45678899999999999999998 88999999999999999985
No 5
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=267.71 Aligned_cols=199 Identities=26% Similarity=0.539 Sum_probs=175.8
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEe---ccCCcccccEEEEEcCCCCeEeC--CCceEeCCCCeeeCCC
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTL---VEQNNTYRGHAIFQCSWGYQLKG--PPDIVCQKNGSWSGAI 76 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~---~~~~~~~g~~~~~~C~~gy~l~G--~~~~~C~~~g~W~~~~ 76 (222)
..++|+.+|+|+...|.|+. .|..|+. .|+.+.. ....|.+|+.|.|+|+.||.|.| +..++|+.+|+|+...
T Consensus 77 ~~~~C~~dG~Ws~~~p~C~~-~C~~P~~~~~g~~~~~~~~~~~~~~Gs~v~y~C~~GY~l~g~~~~~~tC~~~g~Ws~~~ 155 (381)
T 3iyp_F 77 DSVICLKGSQWSDIEEFCNR-SCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAV 155 (381)
T ss_dssp CEEEEETTTEECCCCCCEEE-BCCSCCCCSSEEECTTGGGCCCCBTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCC
T ss_pred CeEEECCCCcccccCCcccc-cCCCCccccCCcccccccCCCcccCCCEEEEEcCCCcccCCCCCceEEecCCCcCcccC
Confidence 46899999999998899986 8999887 8887753 23457889999999999999987 5789999999999999
Q ss_pred CceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCce
Q psy14531 77 PECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRC 153 (222)
Q Consensus 77 p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C 153 (222)
|.|+. +.|+.|+.+.||.+.. ...+.+|++++|+|+.||.|.|...++|+.+| +|++..|.|
T Consensus 156 p~C~~------------~~C~~p~~~~nG~~~~---~~~~~~Gs~v~y~C~~GY~L~G~~~~~C~~~G~~~~Ws~~~P~C 220 (381)
T 3iyp_F 156 EFCKK------------KSCPNPGEIRNGQIDV---PGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC 220 (381)
T ss_dssp CSEEE------------CBCCCCCCCTTEEEEC---SSCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEE
T ss_pred ceecc------------ccCCCCCccCCCceec---CCCcCcCCEEEEEeCCCcccCCccceEEecCCCcceEcCCCCee
Confidence 99999 8999999999999863 34578899999999999999999999999888 899989999
Q ss_pred e-ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeC---CCCcccCCCCceeeCcC
Q psy14531 154 K-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHCTNYTD 221 (222)
Q Consensus 154 ~-~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~---~~G~W~~~~p~C~~~~~ 221 (222)
+ +.|..|+.+.||.+......|.+|+.|+|.|++||.+.|+ ..++|+ ++|+|++++|.|+++..
T Consensus 221 ~~v~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~----~~~~C~~~~~~G~Ws~~~P~C~~~~~ 288 (381)
T 3iyp_F 221 REIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGE----HSIYCTVNNDEGEWSGPPPECRGKSL 288 (381)
T ss_dssp EECBCCCCCCCTTEEEETCCSCCBTTCEEEEEECTTCEEESC----SEEEEECTTSSCEESSCCCEEEC---
T ss_pred eeeecCCCCCCCCCeEecCCCCeecCCEEEEEeCCCCEeCCC----CcEEecccCCCCEEcCCCCeEeCCCC
Confidence 9 6899999999999887666788899999999999999998 899998 47999999999998753
No 6
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=100.00 E-value=2.3e-38 Score=260.45 Aligned_cols=196 Identities=29% Similarity=0.633 Sum_probs=172.0
Q ss_pred CceEeccCCccCCCCCe--eEEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCce-EeCCCCeeeCCCC
Q psy14531 3 HPVFRVSQGQWSGEVPT--CQQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDI-VCQKNGSWSGAIP 77 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~--C~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~-~C~~~g~W~~~~p 77 (222)
..++| .+|.|+...|. |+.+.|+.|+. +||.+... ...|.+|+.|+|+|+.||.|.|...+ +|+.+| |+.+.|
T Consensus 49 ~~~~C-~~g~Ws~~~P~~~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~r~C~~~g-Ws~~~P 126 (277)
T 2wii_C 49 IIMVC-RKGEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTNDIP 126 (277)
T ss_dssp EEEEE-CSSSEEESCSSCCCEECBCCCCCCCTTEEEEEESSSSSBTTCEEEEEECTTEEEESSCCEEEBCSSS-BCSCCC
T ss_pred ceEEc-CCCeeeCCCCCccccccCCcCCCCCCCCEEEecCCCcccCCCEEEEEcCCCceEeCCCceeEeCCCC-cCCCCC
Confidence 35677 59999987654 99999999987 99998765 35688999999999999999999887 999999 999999
Q ss_pred ceeccceeeeecccccccCCCCCCCCCceEEeC--CCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-
Q psy14531 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED--PTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK- 154 (222)
Q Consensus 78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~--~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~- 154 (222)
.|+. +.|+.|+.+.||.+... .....|.+|++|+|+|+.||.|.|...++|+.+|+|++..|.|+
T Consensus 127 ~C~~------------~~C~~p~~~~nG~~~~~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~ 194 (277)
T 2wii_C 127 ICEV------------VKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVE 194 (277)
T ss_dssp EEEE------------CEECCCCCCTTEECCSSSSCTTCCEETTBEEECEECTTEEEESCSEEEBCTTSSBSSCCCEEEE
T ss_pred cccc------------eeCCCCCcccCCeEEecccccCCcccCCCEEEEEcCCCccCcCCCCCEECCCCeECCCCCeeee
Confidence 9998 89999999999987642 12467899999999999999999999999999999999899999
Q ss_pred ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
+.|..| .+.||.+...+..|.+|++|+|.|++||.+.|+ ..++|+. |+|++. |+|+++
T Consensus 195 v~C~~p-~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~G~----~~~~C~~-g~Ws~~-P~C~~~ 252 (277)
T 2wii_C 195 ISCKSP-DVINGSPISQKIIYKENERFQYKCNMGYEYSER----GDAVCTE-SGWRPL-PSCEEA 252 (277)
T ss_dssp CEECCC-CCTTEEESSCCCCEETTCEEEEEECTTEEESSC----SEEEEET-TEESSC-CCEEEC
T ss_pred eeCCCC-CCCCCeEccCCCCCcCCCEEEEEcCCCCeECCC----CCeEccC-CccCCC-CEEcCC
Confidence 579976 577998876556688899999999999999888 7899986 999988 999987
No 7
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=100.00 E-value=1.4e-37 Score=260.72 Aligned_cols=198 Identities=25% Similarity=0.633 Sum_probs=176.5
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCc
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPE 78 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~ 78 (222)
..++|+.+|.|+...|.|+++.|+.|.. +||.+... ..+.+|+.|+|+|+.||.|.|...++|+.+| +|+.+.|.
T Consensus 44 ~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~ 122 (320)
T 1ntj_A 44 FSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVN-TDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPI 122 (320)
T ss_pred CeEEECCCCEECCCCCccccccCcCCCCCCCCEEECC-CCcccCCEEEEEcCCCCEECCCCceEEEeCCCCeeeCCCCCc
Confidence 4689999999998889999999999977 99998753 5689999999999999999999999999887 89999999
Q ss_pred eeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeC
Q psy14531 79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSR 148 (222)
Q Consensus 79 C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~ 148 (222)
|+. +.|+.|+.+.||.+... ....|.+|++|+|+|+.| |.|.|...++|+++ |+|++
T Consensus 123 C~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~ 189 (320)
T 1ntj_A 123 CES------------IPCEIPPSIPNGDFFSP-NREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSG 189 (320)
T ss_pred CcC------------CCCCCCCCCCCCcEecC-CCCccccCCEEEEECCCCCCCcceEEEeCCCceEEecCCCCCCEECC
Confidence 999 89999999999987642 246789999999999999 99999999999987 99999
Q ss_pred CCCcee--ecCCCCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 149 APPRCK--ARCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 149 ~~p~C~--~~C~~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
..|.|+ ..|..| .+.||.+... +..|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++++|.|+++
T Consensus 190 ~~P~C~~~~~C~~p-~~~ng~~~~~~~~~~~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~~ 258 (320)
T 1ntj_A 190 PPPQCIELNKCTPP-HVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGD----SSVYCRSLNRWEPQLPSCFKV 258 (320)
T ss_pred CCccccccCCCCCC-CCCCCeEeCCCCCcccCCCEEEEECCCCCeECCC----CCcEECCCCeECCCCCeeEcc
Confidence 899998 489875 6789987743 45688899999999999999988 789999999999999999874
No 8
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=100.00 E-value=1.4e-37 Score=260.37 Aligned_cols=196 Identities=27% Similarity=0.542 Sum_probs=173.9
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEec---cCCcccccEEEEEcCCCCeEeC--CCceEeCCCCeeeCCC
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLV---EQNNTYRGHAIFQCSWGYQLKG--PPDIVCQKNGSWSGAI 76 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~---~~~~~~g~~~~~~C~~gy~l~G--~~~~~C~~~g~W~~~~ 76 (222)
..++|+.+|.|+...|.|+ +.|+.|+. .|+.+... ...|.+|+.|+|+|+.||.|.| +..++|+.+|+|+.+.
T Consensus 108 ~~~~C~~~G~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~C~~~g~Ws~~~ 186 (316)
T 2c8i_E 108 DSVICLKGSQWSDIEEFCN-RSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAV 186 (316)
T ss_pred CeEEECCCCcCCCCCCccc-cCCCCccccccceeecccccCCccCCCCEEEEEcCCCceECCCCCceEEECCCCcCCCCC
Confidence 4689999999999888997 57999887 88887542 3456789999999999999976 6789999999999999
Q ss_pred CceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCce
Q psy14531 77 PECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRC 153 (222)
Q Consensus 77 p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C 153 (222)
|.|+. +.|+.|+.+.||.+.. ...+.+|++|+|+|+.||.|.|...++|+.+| +|+...|.|
T Consensus 187 p~C~~------------~~C~~p~~~~nG~~~~---~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C 251 (316)
T 2c8i_E 187 EFCKK------------KSCPNPGEIRNGQIDV---PGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC 251 (316)
T ss_pred Cceee------------eeCcCCCCcCCCEEEc---CCCceeCCEEEEEeCCcceECCCccEEEecCCCcccccCCCCcc
Confidence 99999 8999999999998863 34678899999999999999999999999888 899989999
Q ss_pred e-ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCC---CCcccCCCCceee
Q psy14531 154 K-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS---DGTWSLDIPHCTN 218 (222)
Q Consensus 154 ~-~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~---~G~W~~~~p~C~~ 218 (222)
+ +.|+.|+.+.||.+......|.+|+.|+|.|++||.+.|+ ..++|+. +|+|++++|+|++
T Consensus 252 ~~i~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~gy~l~G~----~~~~C~~~~~~g~Ws~~~P~C~~ 316 (316)
T 2c8i_E 252 REIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGE----HSIYCTVNNDEGEWSGPPPECRG 316 (316)
T ss_pred ccccCCCCCccCcceEecCCCcccCCCEEEEEcCCCCeEcCC----CceEeecCCCCCeECCCCCeeCC
Confidence 9 7899999999999887656788899999999999999988 7899984 6999999999974
No 9
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=100.00 E-value=7e-39 Score=258.98 Aligned_cols=191 Identities=26% Similarity=0.592 Sum_probs=171.8
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCC----CeeeCCCC
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN----GSWSGAIP 77 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~----g~W~~~~p 77 (222)
..++| .+|.|+.. |.|+++.|+.|+. +||.+.. ..+.+|+.|+|+|+.||.|.|...++|+.+ |+|+.+.|
T Consensus 47 ~~~~C-~~g~Ws~~-p~C~~~~C~~p~~~~nG~~~~--~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~g~~g~Ws~~~p 122 (244)
T 1rid_A 47 IYAKC-TGTGWTLF-NQCIKRRCPSPRDIDNGQLDI--GGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAP 122 (244)
T ss_dssp SSEEE-ETTEEESC-CCEECCCCCCCCCCSSCBCCC--CCCSSCCCBCCBCCSSCEESSCSSBCBCCSSSSCCSBSSCSC
T ss_pred CeEEc-CCCcCCCC-CeeeeCCCcCCCCCCCCEEeC--CCcccCCEEEEECCCCCeECCCcceEEECCCCCccccCCCCC
Confidence 57899 99999977 9999999999987 9999876 778999999999999999999999999876 79999999
Q ss_pred ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ec
Q psy14531 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-AR 156 (222)
Q Consensus 78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~ 156 (222)
.|+. +.|+.|+.+.||.+. .....|.+|++|+|+|+.||.|.|...++|++ |+|+ ..|.|+ +.
T Consensus 123 ~C~~------------~~C~~p~~~~nG~~~--~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~-g~Ws-~~P~C~~~~ 186 (244)
T 1rid_A 123 ICES------------VKCQSPPSISNGRHN--GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWS-DPPTCQIVK 186 (244)
T ss_dssp CEES------------SCCCSCCCCSSCEEC--CSSSSCCSSCCBCEECCSSCEEECSSSBCCSS-SCCC-SCCEEESCC
T ss_pred eecc------------CcCcCCCCCCCCEEe--cCCCceecCCeEEEEeCCCCeeCCCCceEECC-CccC-CCCeeeeee
Confidence 9999 899999999999886 23567899999999999999999999999997 9999 799998 78
Q ss_pred CCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531 157 CEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218 (222)
Q Consensus 157 C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~ 218 (222)
|..| .+.||.+.. .+..|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++++|+|+.
T Consensus 187 C~~p-~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~ 244 (244)
T 1rid_A 187 CPHP-TISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGS----SSSTCSPGNTWKPELPKCVR 244 (244)
T ss_dssp CCCC-CCSSCBCCSSCCSSCCSCCCCCCBCSSSCEEESC----SCCEEETTTEEESCCCEEEC
T ss_pred CcCC-CCcCCeeccCCCCcccCCCEEEEEcCCCCEECCC----CCeEECCCCeECCCCCEeeC
Confidence 9976 678887753 345678899999999999999988 78999999999999999973
No 10
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=100.00 E-value=4.6e-36 Score=251.51 Aligned_cols=197 Identities=25% Similarity=0.565 Sum_probs=171.3
Q ss_pred CceEeccCC---ccCCCCCeeEEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCC------CeEeCCCceEeCCC--
Q psy14531 3 HPVFRVSQG---QWSGEVPTCQQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWG------YQLKGPPDIVCQKN-- 69 (222)
Q Consensus 3 ~~~~c~~~g---~Ws~~~p~C~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~-- 69 (222)
..++|+.+| .|+...|.|+.+.|+.|+. +||.+... ...|.+|++|+|+|+.| |.|.|...++|+.+
T Consensus 103 ~~~~C~~~g~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~ 182 (320)
T 1ntj_A 103 SSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDG 182 (320)
T ss_pred CceEEEeCCCCeeeCCCCCcCcCCCCCCCCCCCCCcEecCCCCccccCCEEEEECCCCCCCcceEEEeCCCceEEecCCC
Confidence 468999988 8999899999999999877 99988753 35688999999999999 99999999999987
Q ss_pred --CeeeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeee
Q psy14531 70 --GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWS 147 (222)
Q Consensus 70 --g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws 147 (222)
|+|+++.|.|+.. +.|+.| .+.||.+... ....|.+|++|+|+|+.||.|.|...++|+++|+|+
T Consensus 183 ~~G~Ws~~~P~C~~~-----------~~C~~p-~~~ng~~~~~-~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~g~Ws 249 (320)
T 1ntj_A 183 QVGVWSGPPPQCIEL-----------NKCTPP-HVENAVIVSK-NKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSLNRWE 249 (320)
T ss_pred CCCEECCCCcccccc-----------CCCCCC-CCCCCeEeCC-CCCcccCCCEEEEECCCCCeECCCCCcEECCCCeEC
Confidence 9999999999851 589874 6679987642 356789999999999999999999999999999999
Q ss_pred CCCCceee--cCCCCC-CCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCc---ccCCCCcee
Q psy14531 148 RAPPRCKA--RCEYPG-EPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHCT 217 (222)
Q Consensus 148 ~~~p~C~~--~C~~p~-~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~---W~~~~p~C~ 217 (222)
+..|.|+. .|..|+ .+.||.+... ..|.+|+.|+|.|++||++.|+ ..++|+.+|+ |++++|+|+
T Consensus 250 ~~~P~C~~~~~C~~p~~~~~ng~~~~~-~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~~~~Ws~~~P~C~ 320 (320)
T 1ntj_A 250 PQLPSCFKVKSCGAFLGELPNGHVFVP-QNLQLGAKVTFVCNTGYQLKGN----SSSHCVLDGVESIWNSSVPVCE 320 (320)
T ss_pred CCCCeeEcccccCCCCCCCCCCeEecC-CCcccCCEEEEEcCCCCEECCC----CcCEeeCCCCcCccCCCCCccC
Confidence 88999994 698774 6789987643 3677899999999999999988 7899999999 999999995
No 11
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=100.00 E-value=3.2e-36 Score=269.18 Aligned_cols=199 Identities=24% Similarity=0.582 Sum_probs=179.8
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCc
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPE 78 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~ 78 (222)
..++|+.+|.|+...|.|+.+.|+.|.. +||.+... ..+.+|+.++|+|+.||.|.|...++|+.+| +|+.+.|.
T Consensus 42 ~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~ng~~~~~-~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~ 120 (551)
T 1ntl_A 42 FSITCKQDSTWTSAEDKCIRKQCKTPSDPENGLVHVH-TGIEFGSRINYTCNQGYRLIGSSSAVCVITDQSVDWDTEAPI 120 (551)
T ss_pred ceEEECCCCeECCCCCCcccCCCcCCCCCCCcEEEcC-CCcccCCEEEEECCCCCEECCCccEEEEeCCCcceeCCCCCC
Confidence 4689999999999889999999999977 99998753 5689999999999999999999999999988 89999999
Q ss_pred eeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeC
Q psy14531 79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSR 148 (222)
Q Consensus 79 C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~ 148 (222)
|+. +.|+.|+.+.||.+... ....|.+|++|+|+|+.| |.|.|...++|+.+ |+|++
T Consensus 121 C~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~ 187 (551)
T 1ntl_A 121 CEW------------IPCEIPPGIPNGDFFSS-TREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTSNDGEIGVWSG 187 (551)
T ss_pred CCC------------CCCCCCCcCCCCcEecC-CCCccccCCEEEEEeCCCCCccceeEecCCcceEeeCCCCcCCEECC
Confidence 999 89999999999988642 246789999999999999 89999999999987 99999
Q ss_pred CCCcee--ecCCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 149 APPRCK--ARCEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 149 ~~p~C~--~~C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
..|.|+ ..|..|+.+.||.+.. .+..|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++++|+|.++
T Consensus 188 ~~P~C~~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~~ 257 (551)
T 1ntl_A 188 PPPQCIELNKCTPPPYVENAVMLSENRSLFSLRDIVEFRCHPGFIMKGA----SSVHCQSLNKWEPELPSCFKG 257 (551)
T ss_pred CCCcccCccccCCCCCCCCceEeCCCCCcccCCCEEEEECCCCCEEcCC----CCeEECCCCeECCCCcccccc
Confidence 999998 4899998999998875 345688899999999999999988 789999999999999999876
No 12
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=100.00 E-value=4.9e-36 Score=251.17 Aligned_cols=196 Identities=32% Similarity=0.615 Sum_probs=167.8
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEec----cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCC
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLV----EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIP 77 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~----~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p 77 (222)
..++|+.+|.|+...|.|+.+.|+.|.. .||.+... ...+.+|++|+|+|+.||.|.|+..++|+.+|+|+. .|
T Consensus 101 ~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~Ws~-~P 179 (319)
T 1qub_A 101 DSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LP 179 (319)
T ss_dssp SEEEECTTSCEESCCCEEEECEECCCCCCTTEEEEECCCSBTTBEETTCEEEEEECTTEEEESCSEEEBCTTSSBSC-CC
T ss_pred CceEECCCCeECCCCCCCccCcCCCCCCCCCceEEecccCCCCceecCCEEEEEeCCCceecCCCeEEECCCCeECC-CC
Confidence 5689999999999899999999999988 89988753 245789999999999999999999999999999996 89
Q ss_pred ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecC
Q psy14531 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARC 157 (222)
Q Consensus 78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C 157 (222)
.|+. +.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|+..++|+++|+|+. .|.|+..|
T Consensus 180 ~C~~------------v~C~~p~~~~nG~~~~~-~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~-~P~C~~~C 245 (319)
T 1qub_A 180 ECRE------------VKCPFPSRPDNGFVNYP-AKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSA-MPSCKASC 245 (319)
T ss_dssp EEEE------------CEECCCCCCTTEEEECC-SCSSEETTCEEEEEECTTEEESSCSEEEBCTTSSBSC-CCCEEECB
T ss_pred ceec------------cCCCCCCCCCCCeEecC-CCCccccCCEEEEEcCCCCEECCCCCeEECCCCcCCC-CCCccCcC
Confidence 9999 89999999999988643 3567899999999999999999999999999999998 89999889
Q ss_pred CCCCC----CCCeEEec----CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 158 EYPGE----PQNGKIIP----LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 158 ~~p~~----~~~g~~~~----~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
..|.. +.+|.... .+..|.+|+.|.|.|+.||.+.+.. ..++|+ +|+|+ +|.|..+
T Consensus 246 ~~p~~~~~~~~~g~~~~~~~~~~~~~~~g~~v~f~C~~g~~~~~~~---~~~~C~-~G~w~--~P~C~~~ 309 (319)
T 1qub_A 246 KVPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYT---EDAQCI-DGTIE--VPKCFKE 309 (319)
T ss_dssp CCSSSSCEEESSSSEEEHHHHTTTCBCTTCEEEEEEEETTTTEEEE---EEEECB-TTBCC--CCTTCCC
T ss_pred CCCccccccccCCceeeccccccCcccCCCEEEEEeCCCCccccCC---cCCEec-CCcCc--CCcccCC
Confidence 88753 23444331 2456889999999999999876531 578998 89994 7999754
No 13
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=100.00 E-value=2.9e-35 Score=246.26 Aligned_cols=200 Identities=25% Similarity=0.450 Sum_probs=171.9
Q ss_pred CceEeccCCccCCCCCeeEE-eeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEe-CC-CceEeCCCCeeeCCCC
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQ-IICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLK-GP-PDIVCQKNGSWSGAIP 77 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~-~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~-G~-~~~~C~~~g~W~~~~p 77 (222)
..++|+.+|+|+...|.|+. +.|..|+. +||.+... ...|.+|+.|+|+|+.||.|. |. ..++|+.+|+|+...|
T Consensus 44 ~~~~C~~~g~Ws~~~p~C~~~~~C~~pp~~~ng~~~~~~~~~~~~g~~v~y~C~~Gy~~~~G~~~~~~C~~~G~Ws~~~p 123 (316)
T 2c8i_E 44 DSVICLKGSQWSDIEEFCNRSQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEE 123 (316)
T ss_pred ceEEecCCCcCCCCCcccccCCcCCCCCCCCCCEEcCCCCcccCCCCEEEEEeCCCCcccCCCCCeEEECCCCcCCCCCC
Confidence 47899999999998899985 68998876 99987643 245788999999999999986 75 6799999999999889
Q ss_pred ceeccceeeeecccccccCCCCCCCCCceEEeC-CCCCCcCCCCEEEEEcCCCCEEcC--CCeEEeCcCCeeeCCCCcee
Q psy14531 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED-PTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRCK 154 (222)
Q Consensus 78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~-~~~~~~~~g~~~~~~C~~gy~~~g--~~~~~C~~~g~Ws~~~p~C~ 154 (222)
.|.. .|+.|+.+.|+.+... .....|.+|++++|+|+.||.+.| ...++|+.+|+|+...|.|+
T Consensus 124 ~C~~-------------~C~~p~~~~~g~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~C~~~g~Ws~~~p~C~ 190 (316)
T 2c8i_E 124 FCNR-------------SCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCK 190 (316)
T ss_pred cccc-------------CCCCccccccceeecccccCCccCCCCEEEEEcCCCceECCCCCceEEECCCCcCCCCCCcee
Confidence 9987 7999998889876532 124568899999999999999986 57899999999999899999
Q ss_pred -ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccCCCCceeeCc
Q psy14531 155 -ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSLDIPHCTNYT 220 (222)
Q Consensus 155 -~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~~~p~C~~~~ 220 (222)
+.|..|+.+.||.+.... .+..|+.|+|.|++||.+.|. ..++|+.+| +|++++|.|+++.
T Consensus 191 ~~~C~~p~~~~nG~~~~~~-~~~~g~~~~~~C~~Gy~l~G~----~~~~C~~~g~~~~Ws~~~P~C~~i~ 255 (316)
T 2c8i_E 191 KKSCPNPGEIRNGQIDVPG-GILFGATISFSCNTGYKLFGS----TSSFCLISGSSVQWSDPLPECREIY 255 (316)
T ss_pred eeeCcCCCCcCCCEEEcCC-CceeCCEEEEEeCCcceECCC----ccEEEecCCCcccccCCCCcccccc
Confidence 789999999999987532 456799999999999999988 889999877 8999999998764
No 14
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=100.00 E-value=2.4e-35 Score=263.58 Aligned_cols=201 Identities=25% Similarity=0.554 Sum_probs=177.9
Q ss_pred CceEeccCC---ccCCCCCeeEEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCC------CeEeCCCceEeCCC--
Q psy14531 3 HPVFRVSQG---QWSGEVPTCQQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWG------YQLKGPPDIVCQKN-- 69 (222)
Q Consensus 3 ~~~~c~~~g---~Ws~~~p~C~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~-- 69 (222)
..++|..+| .|+...|.|+.+.|+.|+. +||.+... ...|.+|+.|+|+|+.| |.|.|+..++|+.+
T Consensus 101 ~~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~ 180 (551)
T 1ntl_A 101 SSAVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTSNDG 180 (551)
T ss_pred ccEEEEeCCCcceeCCCCCCCCCCCCCCCCcCCCCcEecCCCCccccCCEEEEEeCCCCCccceeEecCCcceEeeCCCC
Confidence 468999998 8999899999999999877 99988754 35688999999999999 89999999999987
Q ss_pred --CeeeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeee
Q psy14531 70 --GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWS 147 (222)
Q Consensus 70 --g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws 147 (222)
|+|+++.|.|+.. +.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|+..++|+.+|+|+
T Consensus 181 ~~G~Ws~~~P~C~~~-----------~~C~~p~~~~ng~~~~~-~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~Ws 248 (551)
T 1ntl_A 181 EIGVWSGPPPQCIEL-----------NKCTPPPYVENAVMLSE-NRSLFSLRDIVEFRCHPGFIMKGASSVHCQSLNKWE 248 (551)
T ss_pred cCCEECCCCCcccCc-----------cccCCCCCCCCceEeCC-CCCcccCCCEEEEECCCCCEEcCCCCeEECCCCeEC
Confidence 9999999999841 58999999999987642 356788999999999999999999999999999999
Q ss_pred CCCCceee--cCCCCCCCCCeEEe-cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 148 RAPPRCKA--RCEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 148 ~~~p~C~~--~C~~p~~~~~g~~~-~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
+..|.|+. .|..|+.+.||.+. .....|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++.+|.|..+
T Consensus 249 ~~~P~C~~~~~C~~p~~~~~g~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g~W~~~~p~C~~~ 319 (551)
T 1ntl_A 249 PELPSCFKGVICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDGYTLEGS----SQSQCQSDGSWNPLLAKCVSR 319 (551)
T ss_pred CCCccccccccCCCCCcCCCCccccCCCCCcccCCEEEEEcCCCcEecCC----cceEEeCCCeECCCCCeeeee
Confidence 98999994 69999899999877 3344688899999999999999888 789999899999999999764
No 15
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.1e-35 Score=232.18 Aligned_cols=174 Identities=27% Similarity=0.557 Sum_probs=153.3
Q ss_pred eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCC-------CCceeccceeeeecccccc
Q psy14531 23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGA-------IPECNAFFFFFFFFFFNPV 94 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~-------~p~C~~~~~~~~~~~~~~~ 94 (222)
+.|+.|+. +||.+... ..+.+|+.|+|+|+.||.|.| ..++|+.+|+|+.+ .|.|+. +
T Consensus 2 ~~C~~p~~~~nG~~~~~-~~~~~g~~~~y~C~~Gy~l~g-~~~~C~~~G~Ws~~~~~~~~~~p~C~~------------~ 67 (223)
T 3erb_A 2 PSCPQNVNISGGTFTLS-HGWAPGSLLTYSCPQGLYPSP-ASRLCKSSGQWQTPGATRSLSKAVCKP------------V 67 (223)
T ss_dssp -CCCSCCCCBTCEEEES-STTSTTCEEEEECCTTEEEES-CEEEECTTSCEECC-------CCEEEE------------C
T ss_pred CcCcCCCCCCCCEEecC-CCCcCCCEEEEECCCCCeecC-CeeEECCCCeECCCccCCCCCCCeEee------------e
Confidence 46998877 99999865 468999999999999999999 45999999999984 899999 8
Q ss_pred cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee---ecCCCCCCCCCeEEecC
Q psy14531 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQNGKIIPL 171 (222)
Q Consensus 95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~---~~C~~p~~~~~g~~~~~ 171 (222)
.|+.|+.+.||.+.. ....|.+|++++|+|+.||.|.|...++|+.+|+|+...|.|+ +.|+.|.. .+|.+..
T Consensus 68 ~C~~p~~~~nG~~~~--~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~~~C~~p~~-~~g~~~~- 143 (223)
T 3erb_A 68 RCPAPVSFENGIYTP--RLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGI-SLGAVRT- 143 (223)
T ss_dssp EEECCSCCTTEEEES--CCSEEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEECSCSSSCCCCC-CTTEEEE-
T ss_pred ECcCCCCCCCCEEec--CCCCccCCCEEEEEeCCCCEEcCCCceEECCCCeECCCCCEEEeCCccCcCCCC-CCCcEec-
Confidence 999999999998863 2467899999999999999999999999999999999999999 58998854 4555543
Q ss_pred ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531 172 KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218 (222)
Q Consensus 172 ~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~ 218 (222)
...|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++++|+|++
T Consensus 144 ~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~Ws~~~P~C~~ 186 (223)
T 3erb_A 144 GFRFGHGDKVRYRCSSNLVLTGS----SERECQGNGVWSGTEPICRQ 186 (223)
T ss_dssp CCCCSTTCEEEEEECTTCEEESC----SEEEBCTTSCBSSCCCEEEC
T ss_pred CCCCCCCCEEEEEeCCCCEEcCC----CceEECCCCeECCCCCEEeC
Confidence 24677899999999999999988 78999999999999999997
No 16
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=100.00 E-value=6.8e-34 Score=230.80 Aligned_cols=178 Identities=27% Similarity=0.546 Sum_probs=157.2
Q ss_pred CCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCC--CceEeCCCCeeeC-CCCceeccceeeeecccccccCCCC
Q psy14531 25 CPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGP--PDIVCQKNGSWSG-AIPECNAFFFFFFFFFFNPVHCPVP 99 (222)
Q Consensus 25 C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~--~~~~C~~~g~W~~-~~p~C~~~~~~~~~~~~~~~~C~~p 99 (222)
|..|+. .|+.+... ...|.+|++|+|+|+.||.|.|+ ..++|+.+|+|+. +.|.|+. +.|+.|
T Consensus 1 C~~PP~~~~~~~~~~~~~~y~~g~~~~y~C~~Gy~~~g~~~~~~~C~~~g~Ws~~~~p~C~~------------~~C~~p 68 (252)
T 3o8e_B 1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYR------------ETCPYI 68 (252)
T ss_dssp CCSCCCCSSEEESSCCCSSCCTTCEEEEEECTTEEECSSSCCEEEBCTTSSBCCCCSTTEEE------------CBCCCC
T ss_pred CCCCCCCCcccCcCCcCCcCCCCCEEEEEcCCCccCCCCCCCeEEECCCCcCCCCCCCceee------------eECcCC
Confidence 677777 88887643 45689999999999999999864 7899999999998 5899998 899999
Q ss_pred CCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCcee-ecCCCCCCCCCeEEecC-ccc
Q psy14531 100 ALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRCK-ARCEYPGEPQNGKIIPL-KFF 174 (222)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C~-~~C~~p~~~~~g~~~~~-~~~ 174 (222)
+.+.||.+... ...|.+|++++|+|+.||.|.|+..++|+.+| +|+...|.|+ +.|..|+.+.||.+... ...
T Consensus 69 ~~~~nG~~~~~--~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~ 146 (252)
T 3o8e_B 69 RDPLNGQAVPA--NGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV 146 (252)
T ss_dssp CCCTTEEEEET--TSSSBTTCEEEEEECTTEEEESCSEEEEEESSSCEEESSCCCEEEECEECCCCCCTTEEESSTTCCC
T ss_pred CCCCCcEEeec--CCCccCCCEEEEECCCCCeECCCCEEEEeCCCCCCeeCCCCCeEeeeEcCCCCCCCCCcEeccCCce
Confidence 99999998753 45689999999999999999999999999988 8999999999 68999999999998743 346
Q ss_pred cCCCCeEEEEcCC-----CCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531 175 YDPGDHIQVTCND-----GYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT 220 (222)
Q Consensus 175 ~~~g~~v~y~C~~-----gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~ 220 (222)
|.+|+.|+|.|+. ||.+.|. ..++|+.+|+|++++|.|+++.
T Consensus 147 ~~~g~~v~y~C~~g~~~~gy~l~G~----~~~~C~~~G~Ws~~~P~C~~v~ 193 (252)
T 3o8e_B 147 FEYLDAVTYSCDPAPGPDPFSLIGE----STIYCGDNSVWSRAAPECKVVK 193 (252)
T ss_dssp EETTCEEEEEECCCSSSSCCEEESC----SEEEBCTTSSBSSCCCEEECCC
T ss_pred ecCCCEEEEEeCCCCCCCCeEEeCC----CceEECCCCeECCCCCEEeeee
Confidence 7789999999998 8999988 7899999999999999998763
No 17
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=100.00 E-value=1.5e-33 Score=231.80 Aligned_cols=179 Identities=28% Similarity=0.582 Sum_probs=154.8
Q ss_pred EeeCCCCcc-CCCeEEe---ccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCc--eeccceeeeeccccccc
Q psy14531 22 QIICPKIVV-ENPYLTL---VEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPE--CNAFFFFFFFFFFNPVH 95 (222)
Q Consensus 22 ~~~C~~p~~-~ng~~~~---~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~--C~~~~~~~~~~~~~~~~ 95 (222)
...|+.|+. .|+.+.. ....|.+|++++|+|+.||.|.|...++|. +|+|+...|. |+. +.
T Consensus 5 ~~~C~~pp~~~n~~i~~g~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~~~P~~~C~~------------~~ 71 (277)
T 2wii_C 5 AEDCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCR-KGEWVALNPLRKCQK------------RP 71 (277)
T ss_dssp ---CCSCCCCCSSEEECSCCCCSSCCTTCEEEEEECTTEECSSCEEEEEC-SSSEEESCSSCCCEE------------CB
T ss_pred cccCcCCCCCccccccccccccCCcCCCCEEEEEcCCCCcCCCCceEEcC-CCeeeCCCCCccccc------------cC
Confidence 356998766 8887653 235688999999999999999999999997 9999987664 988 89
Q ss_pred CCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeE-EeCcCCeeeCCCCcee-ecCCCCCCCCCeEEec---
Q psy14531 96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETI-VCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIP--- 170 (222)
Q Consensus 96 C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~-~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~--- 170 (222)
|+.|+.+.||.+... ....|.+|++++|+|+.||.|.|...+ +|+.+| |+...|.|+ +.|..|+.+.||.+..
T Consensus 72 C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~l~G~~~~r~C~~~g-Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~ 149 (277)
T 2wii_C 72 CGHPGDTPFGTFTLT-GGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTNDIPICEVVKCLPVTAPENGKIVSSAM 149 (277)
T ss_dssp CCCCCCCTTEEEEEE-SSSSSBTTCEEEEEECTTEEEESSCCEEEBCSSS-BCSCCCEEEECEECCCCCCTTEECCSSSS
T ss_pred CcCCCCCCCCEEEec-CCCcccCCCEEEEEcCCCceEeCCCceeEeCCCC-cCCCCCcccceeCCCCCcccCCeEEeccc
Confidence 999999999988643 246789999999999999999999886 999999 999999999 7899999999999876
Q ss_pred -CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 171 -LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 171 -~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
....|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++++|.|+++
T Consensus 150 ~~~~~~~~g~~v~y~C~~Gy~L~G~----~~~~C~~~G~Ws~~~P~C~~v 195 (277)
T 2wii_C 150 EPDREYHFGQAVRFVCNSGYKIEGD----EEMHCSDDGFWSKEKPKCVEI 195 (277)
T ss_dssp CTTCCEETTBEEECEECTTEEEESC----SEEEBCTTSSBSSCCCEEEEC
T ss_pred ccCCcccCCCEEEEEcCCCccCcCC----CCCEECCCCeECCCCCeeeee
Confidence 345677899999999999999988 789999999999999999986
No 18
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=5e-33 Score=262.18 Aligned_cols=201 Identities=26% Similarity=0.599 Sum_probs=172.1
Q ss_pred CceEeccC----CccCCCCCeeEE----eeCCCCccCCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeee
Q psy14531 3 HPVFRVSQ----GQWSGEVPTCQQ----IICPKIVVENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWS 73 (222)
Q Consensus 3 ~~~~c~~~----g~Ws~~~p~C~~----~~C~~p~~~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~ 73 (222)
.+++|+.+ |.|+...|.|+. +.|+.|.++||.+... ...|.+|+.|+|+|+.||.|.|+..++|+.+|+|+
T Consensus 738 ~~~~C~~~~~g~g~Ws~~~P~C~~~~~~~~C~~p~i~ng~~~~~~~~~y~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~Ws 817 (951)
T 2gsx_A 738 KKLQCRSDSKGHGSWSGPSPQCLRSPPVTRCPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWV 817 (951)
T ss_pred cceEEccCCCCCCcCCCCCCcccccCCCccCCCCcCCCCceecCCCCccccCCEEEEEcCCCcEEeCCceeEEccCCeEC
Confidence 46899998 999999999998 7899976688886543 24688999999999999999999999999999999
Q ss_pred CCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCce
Q psy14531 74 GAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153 (222)
Q Consensus 74 ~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C 153 (222)
...|.|+.. ..+.|..|+.+.||.+... ....|.+|++|+|+|+.||.|.|+..++|+.+|+|+...|.|
T Consensus 818 ~~~P~C~~~---------~~~~C~~pp~~~ng~~~~~-~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C 887 (951)
T 2gsx_A 818 PGVPTCIKK---------AFIGCPPPPKTPNGNHTGG-NIARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHC 887 (951)
T ss_pred CCCceeecc---------cccCCCCCCcCCcceeeCC-ccccccCCCEEEEEcCCCCEECCCCeeEECCCCEECCCCcee
Confidence 999999861 1147999999999987632 245688999999999999999999999999999999989999
Q ss_pred e-ecCCCCCCCCCeEEe--cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531 154 K-ARCEYPGEPQNGKII--PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218 (222)
Q Consensus 154 ~-~~C~~p~~~~~g~~~--~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~ 218 (222)
+ +.|..|..+ ++... .....|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++++|+|+.
T Consensus 888 ~~~~C~~p~~~-~~~~~~~~~~~~y~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~p~C~~ 950 (951)
T 2gsx_A 888 KEVNCSSPADM-DGIQKGLEPRKMYQYGAVVTLECEDGYMLEGS----PQSQCQSDHQWNPPLAVCRS 950 (951)
T ss_pred eeeeCCCCCCC-CCcccccccCCcCcCCCEEEEEcCCCCeECCC----CceEECCCCeECCCCCeecC
Confidence 9 679988654 44332 1223678899999999999999988 78999999999999999975
No 19
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=6e-33 Score=261.64 Aligned_cols=211 Identities=26% Similarity=0.489 Sum_probs=178.3
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEecc-CCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVE-QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN 80 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~-~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~ 80 (222)
..++|+.+|+|+...|.|+++ |+.|+. +||.+.... ..|.+|+.|+|+|+.||.|.|...++|+.+|+|+.+.|.|+
T Consensus 369 ~~~~C~~~G~Ws~~~P~C~~~-C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~p~C~ 447 (951)
T 2gsx_A 369 KQIRCNAQGTWEPSAPVCEKE-CQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQCK 447 (951)
T ss_pred CceEECCCCcCCCCCcccccc-cCCCCcccCCeEecCCCcccCCCCEEEEEcCCCCEECCCCCeEECCCCcCCCCCCccc
Confidence 578999999999999999998 999887 999987543 24777999999999999999999999999999999889996
Q ss_pred ccceeee-----------------ec---------------------------ccccccCCCCCCCCCceEEeCCCCCCc
Q psy14531 81 AFFFFFF-----------------FF---------------------------FFNPVHCPVPALPLNGHLIEDPTGGPY 116 (222)
Q Consensus 81 ~~~~~~~-----------------~~---------------------------~~~~~~C~~p~~~~~g~~~~~~~~~~~ 116 (222)
...+-.. .| .-..+.|++|+.+.||.+.... ...|
T Consensus 448 ~~~C~~~~~~~~~~~~~~~~~~~~~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C~~i~C~~pp~i~nG~~~~~~-~~~~ 526 (951)
T 2gsx_A 448 VAACEATGRQLLTKPQHQFVRPDVNSSCGEGYKLSGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSS-LEDF 526 (951)
T ss_pred eeeCCCCCcccccCCCCceecCeEEEEcCCCcEEcCCCeeEccCcccccCCCceecceeCCCCCCCCCCeEeCCC-CCcc
Confidence 5221100 00 0135789999999999886432 3468
Q ss_pred CCCCEEEEEcCCC------CEEcCCCeEEeC----cCCeeeCCCCce-----eecCCCCCCCCCeEEecCccccCCCCeE
Q psy14531 117 RVGAILQFACNDR------HHLLGEETIVCT----ETGRWSRAPPRC-----KARCEYPGEPQNGKIIPLKFFYDPGDHI 181 (222)
Q Consensus 117 ~~g~~~~~~C~~g------y~~~g~~~~~C~----~~g~Ws~~~p~C-----~~~C~~p~~~~~g~~~~~~~~~~~g~~v 181 (222)
.+|++|+|+|+.| |.|.|...++|+ ++|+|+...|.| .+.|..|..+.++.+...+..|.+|+.|
T Consensus 527 ~~g~~v~y~C~~g~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~~~~~~~~g~~v 606 (951)
T 2gsx_A 527 PYGTTVTYTCNPGPERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEAPYFYNDTV 606 (951)
T ss_pred ccCCEEEEEcCCCCCCCceEEEecCceEEecccCCCCccCcCCCceeecCCCccCCcCCCCCCCceEeCCCCcccCCCEE
Confidence 9999999999999 999999999998 899999989999 3689998776666666666678889999
Q ss_pred EEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 182 ~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
+|.|++||.+.|+ ..++|+.+|+|++++|+|+++
T Consensus 607 ~~~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~~ 640 (951)
T 2gsx_A 607 TFKCYSGFTLKGS----SQIRCKADNTWDPEIPVCEKE 640 (951)
T ss_pred EEEeCCCCEEcCC----CceEECCCCCCCCCCCcceec
Confidence 9999999999988 889999999999999999885
No 20
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-34 Score=220.52 Aligned_cols=176 Identities=23% Similarity=0.546 Sum_probs=146.9
Q ss_pred EeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccc--cCC
Q psy14531 22 QIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV--HCP 97 (222)
Q Consensus 22 ~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~--~C~ 97 (222)
++.|+.|+. +||.+... ...|.+|++|+|+|+.||.|.|+..++|+ +|+|+. .|.|+. + .|+
T Consensus 2 ~v~C~~pp~~~ng~~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~-~p~C~~------------~~~~C~ 67 (188)
T 3sw0_X 2 GTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-NGNWTE-PPQCKD------------STGKCG 67 (188)
T ss_dssp CCCBCSCCCCTTEEECSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCEEEC------------TTCCBC
T ss_pred cCcCcCCCCCCCCEEecccCCcccCCCEEEEECCCCCEECCCCEEEeC-CCEeCC-CCccCc------------CCCcCC
Confidence 467999887 99988753 35688999999999999999999999999 999995 699998 6 899
Q ss_pred CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecCCCCCCCCCe---EEec--Cc
Q psy14531 98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNG---KIIP--LK 172 (222)
Q Consensus 98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C~~p~~~~~g---~~~~--~~ 172 (222)
.|+.+.||.+... ....|.+|++++|+|+.||.|.|+..++|+ +|+|+. .|.|+..|..|..+.++ .+.. ..
T Consensus 68 ~p~~~~ng~~~~~-~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~-~G~Ws~-~P~C~~~C~~p~~~~~~~~~~~~~~~~~ 144 (188)
T 3sw0_X 68 PPPPIDNGDITSF-PLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWSE-PPKCLHPCVISREIMENYNIALRWTAKQ 144 (188)
T ss_dssp SCCCCTTEEESSC-CCSCBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCEEECCEECCHHHHHHHTEEESCCSSC
T ss_pred CCCccCCCeEecC-CCCcccCCCEEEEEcCCCCEECCCCeEEcC-CCccCC-CCcccccCCCChHHhccCceeeeccccc
Confidence 9999999988642 256789999999999999999999999999 999998 69999999988766533 2221 22
Q ss_pred ccc-CCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531 173 FFY-DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218 (222)
Q Consensus 173 ~~~-~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~ 218 (222)
..| .+|+.|+|.|++||.+.|+... ..++|+ +|+| .+|+|+.
T Consensus 145 ~~y~~~g~~v~~~C~~Gy~l~G~~~~-~~~~C~-~g~w--~~P~C~~ 187 (188)
T 3sw0_X 145 KLYSRTGESVEFVCKRGYRLSSRSHT-LRTTCW-DGKL--EYPTCAK 187 (188)
T ss_dssp CCEECTTCEEEEEECTTCEECTTCCC-SEEECB-TTBC--CCCCEEC
T ss_pred cccccCCCEEEEECCCCceeCCCCCC-eEeEcC-CCcE--eCCceec
Confidence 233 7899999999999999987211 289998 8999 4799975
No 21
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=100.00 E-value=1.8e-32 Score=263.29 Aligned_cols=197 Identities=29% Similarity=0.658 Sum_probs=172.1
Q ss_pred CceEeccCCccCCCCC--eeEEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCc-eEeCCCCeeeCCCC
Q psy14531 3 HPVFRVSQGQWSGEVP--TCQQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPD-IVCQKNGSWSGAIP 77 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p--~C~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~-~~C~~~g~W~~~~p 77 (222)
..++| .+|.|+...| .|+++.|+.|.. +||.+... ...+.+|++|+|+|+.||.|.|+.. ++|+.+| |+++.|
T Consensus 44 ~~~~C-~~g~Ws~~~p~~~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~~~f~C~~Gy~L~G~~~~~~C~~~g-Ws~~~P 121 (1213)
T 1haq_A 44 VIMVC-RKGEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTNDIP 121 (1213)
T ss_pred CeEEc-CCCcccCCCCCCceEeCCCcCCCCCCCCEEEeccCCccccCCEEEEEeCCCCeEccccceeEECCCC-ccCCCC
Confidence 35677 6999998654 699999999987 99998764 3468899999999999999999876 7999999 999999
Q ss_pred ceeccceeeeecccccccCCCCCCCCCceEEeCC--CCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-
Q psy14531 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDP--TGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK- 154 (222)
Q Consensus 78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~--~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~- 154 (222)
.|+. +.|++|+.+.||.+.... ....|.+|++|+|+|+.||.|.|...++|+++|+|+...|.|+
T Consensus 122 ~C~~------------i~C~~~~~p~nG~~~~~~~~~~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~ 189 (1213)
T 1haq_A 122 ICEV------------VKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVE 189 (1213)
T ss_pred Ceec------------cccCCCCCCCCCeEeccccccCCccccCCEEEEEcCCCCEEcCCCceEECCCCcCCCCCCEEEe
Confidence 9999 899999999999886321 1356889999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531 155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT 220 (222)
Q Consensus 155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~ 220 (222)
+.|+.| .+.||.+...+..|..|+.|+|.|++||.+.|. ..++|+.+| |++ +|+|+++.
T Consensus 190 v~C~~p-~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g-Ws~-~P~C~~~~ 248 (1213)
T 1haq_A 190 ISCKSP-DVINGSPISQKIIYKENERFQYKCNMGYEYSER----GDAVCTESG-WRP-LPSCEEKS 248 (1213)
T ss_pred cccCCC-CCCCCeEecCCCccCCCCEEEEEcCCCCEECCC----CCeEECCCC-ccC-CCcccCcc
Confidence 789976 467998887667888899999999999999988 789999999 995 79998753
No 22
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=100.00 E-value=3e-33 Score=225.99 Aligned_cols=173 Identities=27% Similarity=0.516 Sum_probs=153.2
Q ss_pred eCCCCcc-CCCeEEecc-----CCcccccEEEEEcCCCCeEeCC--CceEeCCCCeeeCCCCceeccceeeeeccccccc
Q psy14531 24 ICPKIVV-ENPYLTLVE-----QNNTYRGHAIFQCSWGYQLKGP--PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVH 95 (222)
Q Consensus 24 ~C~~p~~-~ng~~~~~~-----~~~~~g~~~~~~C~~gy~l~G~--~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~ 95 (222)
.|+.|+. +|+.+.... ..|.+|++|+|+|+.||.|.|. ..++| .+|+|+.. |.|+. +.
T Consensus 1 ~C~~PP~~~n~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~~~g~~~~~~~C-~~g~Ws~~-p~C~~------------~~ 66 (244)
T 1rid_A 1 CCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKC-TGTGWTLF-NQCIK------------RR 66 (244)
T ss_dssp CCCCCCCCSSSCBCCSSCCCSSCCCSSCCEECCBCCTTCEECSSCSSSEEE-ETTEEESC-CCEEC------------CC
T ss_pred CcCCCCCCCccEecCCccccccCccCCCCEEEEEeCCCCeEcCCCCCeEEc-CCCcCCCC-Ceeee------------CC
Confidence 3888777 899876532 5688999999999999999876 89999 89999976 99998 79
Q ss_pred CCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcC----CeeeCCCCcee-ecCCCCCCCCCeEEec
Q psy14531 96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRAPPRCK-ARCEYPGEPQNGKIIP 170 (222)
Q Consensus 96 C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~----g~Ws~~~p~C~-~~C~~p~~~~~g~~~~ 170 (222)
|+.|+.+.||.+.. ..|.+|++++|+|+.||.|.|...++|+.+ |+|+...|.|+ +.|+.|+.+.||.+..
T Consensus 67 C~~p~~~~nG~~~~----~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~g~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~ 142 (244)
T 1rid_A 67 CPSPRDIDNGQLDI----GGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNG 142 (244)
T ss_dssp CCCCCCCSSCBCCC----CCCSSCCCBCCBCCSSCEESSCSSBCBCCSSSSCCSBSSCSCCEESSCCCSCCCCSSCEECC
T ss_pred CcCCCCCCCCEEeC----CCcccCCEEEEECCCCCeECCCcceEEECCCCCccccCCCCCeeccCcCcCCCCCCCCEEec
Confidence 99999999998763 678899999999999999999999999876 79999899999 6899999999999986
Q ss_pred CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531 171 LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT 220 (222)
Q Consensus 171 ~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~ 220 (222)
....|.+|+.|+|.|++||.+.|+ ..++|+. |+|+ ++|.|+++.
T Consensus 143 ~~~~~~~g~~v~y~C~~Gy~l~G~----~~~~C~~-g~Ws-~~P~C~~~~ 186 (244)
T 1rid_A 143 YEDFYTDGSVVTYSCNSGYSLIGN----SGVLCSG-GEWS-DPPTCQIVK 186 (244)
T ss_dssp SSSSCCSSCCBCEECCSSCEEECS----SSBCCSS-SCCC-SCCEEESCC
T ss_pred CCCceecCCeEEEEeCCCCeeCCC----CceEECC-CccC-CCCeeeeee
Confidence 556788899999999999999988 7899986 9999 899998653
No 23
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=100.00 E-value=1.9e-32 Score=222.57 Aligned_cols=180 Identities=24% Similarity=0.445 Sum_probs=154.9
Q ss_pred eeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEe-CC-CceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531 23 IICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLK-GP-PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV 98 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~-G~-~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~ 98 (222)
+.|..|+. +||.+... ...|.+|++|+|+|+.||.|. |. ..++|+.+|+|+...|.|+. .|+.
T Consensus 2 ~~C~~Pp~i~ng~~~~~~~~~~~~g~~v~y~C~~Gy~~~~G~~~~~~C~~~g~Ws~~~p~C~~-------------~C~~ 68 (254)
T 1ok3_A 2 QDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-------------SCEV 68 (254)
T ss_dssp CEECSCCCCTTEEECCTTCSCEETTCEEEEEECTTCEECTTSCCEEEEETTTEECCCCCCEEC-------------CCCS
T ss_pred CCCCCCCcCCcceecCCcCcccCCCCEEEEEcCCCcEeCCCCCCEEEeCCCCCCCCCCCcCCC-------------CCCC
Confidence 46898887 99988643 245788999999999999986 64 68999999999998999977 8999
Q ss_pred CCCCCCceEEeC-CCCCCcCCCCEEEEEcCCCCEEcC--CCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCccc
Q psy14531 99 PALPLNGHLIED-PTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKFF 174 (222)
Q Consensus 99 p~~~~~g~~~~~-~~~~~~~~g~~~~~~C~~gy~~~g--~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~~ 174 (222)
|+.+.||.+... .....|.+|++|+|+|+.||.+.| ...++|+.+|+|+...|.|+ +.|..|+.+.||.+.... .
T Consensus 69 p~~~~~g~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~-~ 147 (254)
T 1ok3_A 69 PTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPG-G 147 (254)
T ss_dssp CCCCSSEEECTTGGGCCCCCTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCCCSEEECBCCCCCCCTTEEEECTT-C
T ss_pred CCCCCcccccccccccCcCCCCCEEEEEeCCCceeCCCCCCeEEECCCCeECCCCCeeCccCCcCCCCCCCCEEEcCC-C
Confidence 999899987532 124568899999999999999986 57899999999999899999 799999999999987532 4
Q ss_pred cCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccCCCCceeeCc
Q psy14531 175 YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSLDIPHCTNYT 220 (222)
Q Consensus 175 ~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~~~p~C~~~~ 220 (222)
+.+|+.|+|.|++||.+.|. ..++|+.+| +|++++|.|+++.
T Consensus 148 ~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~~~~Ws~~~P~C~~v~ 192 (254)
T 1ok3_A 148 ILFGATISFSCNTGYKLFGS----TSSFCLISGSSVQWSDPLPECREIY 192 (254)
T ss_dssp SBTTCEEEEEECTTEEEESC----SEEEEEEETTEEEESSCCCEEEECB
T ss_pred cEEcCEEEEECCCCceeCCC----cceEEEeCCCcccccCCCCcccccc
Confidence 56799999999999999988 889999888 8999999999864
No 24
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=100.00 E-value=2.8e-32 Score=262.02 Aligned_cols=194 Identities=23% Similarity=0.511 Sum_probs=174.3
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee-
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN- 80 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~- 80 (222)
..++|+.+| |+. .|.|.++.|+.|.. .||.+......|.+|++|+|+|++||.|.|+..++|+.+ .|+.+.|.|+
T Consensus 531 ~~~~C~~~g-Ws~-~p~C~~~~C~~p~~~~~g~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~-~Ws~~~P~C~~ 607 (1213)
T 1haq_A 531 GSIVCGYNG-WSD-LPICYERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQCYHF-GLSPDLPICKE 607 (1213)
T ss_pred cceEecCCC-CCC-CCeeecccCCCCCccCCCccccccCccccCCEEEEEcCCCCEEcCCceeEEecC-cEeCCCCccee
Confidence 469999999 996 69999999999988 898877666778999999999999999999999999955 5999999995
Q ss_pred -ccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCce--e-ec
Q psy14531 81 -AFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC--K-AR 156 (222)
Q Consensus 81 -~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C--~-~~ 156 (222)
. +.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|...++|++ |+|+. .|.| + +.
T Consensus 608 ~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~-G~Ws~-~P~C~~~~~~ 672 (1213)
T 1haq_A 608 QV------------QSCGPPPELLNGNVKEK-TKEEYGHSEVVEYYCNPRFLMKGPNKIQCVD-GEWTT-LPVCIVEEST 672 (1213)
T ss_pred ec------------ccCcCCCCCCCCeEecc-cCccccCCCEEEEEeCCCceEcCCCeEEeCC-CeeCC-CcccccccCc
Confidence 4 78999999999998743 2467899999999999999999999999996 99999 9999 5 78
Q ss_pred CCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT 220 (222)
Q Consensus 157 C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~ 220 (222)
|+.|+.+.||.+......|.+|+.|+|.|++||.+.|. ..++| .+|+|+ ++|+|+++.
T Consensus 673 C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~----~~~~C-~~G~Ws-~~p~C~~~~ 730 (1213)
T 1haq_A 673 CGDIPELEHGWAQLSSPPYYYGDSVEFNCSESFTMIGH----RSITC-IHGVWT-QLPQCVAID 730 (1213)
T ss_pred CCCCCcCCCCeeccCCCcccCCCEEEEEeCCCceeCCC----CeEEC-CCCCcc-Ccccccccc
Confidence 99999999999887666788999999999999999988 88999 799999 899998875
No 25
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=99.98 E-value=4.5e-32 Score=224.26 Aligned_cols=177 Identities=24% Similarity=0.483 Sum_probs=154.2
Q ss_pred EeeCCCCcc-CCCeEEec--cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531 22 QIICPKIVV-ENPYLTLV--EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV 98 (222)
Q Consensus 22 ~~~C~~p~~-~ng~~~~~--~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~ 98 (222)
...|+.|+. +|+.+... ...|.+|+.++|+|+.|| +.|...++|+.+|+|+...|.|+. +.|+.
T Consensus 35 ~~~C~~pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~~~~C~~~g~Ws~~~p~C~~------------~~C~~ 101 (290)
T 2xrb_A 35 LGQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVCIR------------KQCET 101 (290)
T ss_dssp --CBCSCCCCSSEEESSCCSCSCBCTTCEEEEEECTTB-CCCEEEEEECTTSCEECCTTCSCB------------CBCCC
T ss_pred cccccCCCCCCccccccccccCcccCCCEEEEEccCCc-CCCCCeEEECCCCeECCCCCCcCc------------CCCcC
Confidence 356999887 89887543 246889999999999999 566678999999999998999999 89999
Q ss_pred CCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCcee-ecCCCCCCCCCeEEecC-cc
Q psy14531 99 PALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRCK-ARCEYPGEPQNGKIIPL-KF 173 (222)
Q Consensus 99 p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C~-~~C~~p~~~~~g~~~~~-~~ 173 (222)
|+.+.||.+.. ...|.+|++|+|+|+.||.|.|...++|+.+| +|++..|.|+ +.|+.|+.+.||.+... ..
T Consensus 102 p~~~~nG~~~~---~~~~~~G~~v~y~C~~GY~l~G~~~~~C~~~g~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~ 178 (290)
T 2xrb_A 102 PLDPQNGIVHV---NTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNRE 178 (290)
T ss_dssp CCCCTTEEEEE---SSCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEECEECCCCCBTTEEEECSSTT
T ss_pred CCCCCCceEec---CCCcccCCEEEEECCCCceeCCCCceEEEeCCCCceeCCCCCeeccccCCCCCCCCCCeEecCCCC
Confidence 99999999864 34678999999999999999999999999888 8999899999 68999999999998753 34
Q ss_pred ccCCCCeEEEEcCCC------CeeccCCCCCCcceeCCC----CcccCCCCceee
Q psy14531 174 FYDPGDHIQVTCNDG------YVKPLDITPTSGPYCQSD----GTWSLDIPHCTN 218 (222)
Q Consensus 174 ~~~~g~~v~y~C~~g------y~~~~~~~~~~~~~C~~~----G~W~~~~p~C~~ 218 (222)
.|.+|+.|+|.|++| |.+.|+ ..++|+.+ |+|+++.|+|+.
T Consensus 179 ~~~~g~~v~y~C~~G~~~~~~y~l~G~----~~~~C~~~~~~~G~Ws~~~P~C~~ 229 (290)
T 2xrb_A 179 DFHYGMVVTYQCNTDARGKKLFNLVGE----PSIHCTSIDGQVGVWSGPPPQCIE 229 (290)
T ss_dssp CEETTCEEEEEECBCTTSCBCEEEESC----SEEEEEESSSSSEEESSCCCEEEE
T ss_pred ccccCCEEEEEeCCCCCCcceEEecCC----ceeEecCCCCCCCeECCCCCcccc
Confidence 677899999999999 888888 78999976 999999999986
No 26
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.97 E-value=7.6e-33 Score=215.07 Aligned_cols=173 Identities=27% Similarity=0.505 Sum_probs=144.2
Q ss_pred EeeCCCCccCCCeEEec---cCC--cccccEEEEEcCCCCeEeCCC---ceEeCCCCeeeCCCCceeccceeeeeccccc
Q psy14531 22 QIICPKIVVENPYLTLV---EQN--NTYRGHAIFQCSWGYQLKGPP---DIVCQKNGSWSGAIPECNAFFFFFFFFFFNP 93 (222)
Q Consensus 22 ~~~C~~p~~~ng~~~~~---~~~--~~~g~~~~~~C~~gy~l~G~~---~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~ 93 (222)
.+.|+.|.++||.+... ... |.+|+.|+|+|+.||.|.|.. .++|+.+| |+...| |+.
T Consensus 3 ~~~C~~P~~~nG~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~~~-C~~------------ 68 (187)
T 2uwn_A 3 LKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPAVP-CLR------------ 68 (187)
T ss_dssp CCCBCCCCCTTEEETTHHHHTTTCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EESSSC-CEE------------
T ss_pred ccCCCCCccccceEeccccccccccccCCCEEEEECCCCcEecCCccCCEEEeCCCC-CCCCCC-cCC------------
Confidence 35798876699998753 122 368999999999999999984 89999999 997766 987
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc-CCCeEEeCcCCeeeCCCCcee-e-cCCC-CCCCCCeEEe
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL-GEETIVCTETGRWSRAPPRCK-A-RCEY-PGEPQNGKII 169 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~-g~~~~~C~~~g~Ws~~~p~C~-~-~C~~-p~~~~~g~~~ 169 (222)
.|+.| .+.||.+. .....|.+|++|+|+|+.||.|. |...++|+++| |++ .|.|+ + .|+. |+.+.||.+.
T Consensus 69 -~C~~p-~~~ng~~~--~~~~~~~~g~~v~~~C~~Gy~l~~G~~~~~C~~~g-Ws~-~P~C~~v~~C~~~p~~~~nG~~~ 142 (187)
T 2uwn_A 69 -KCYFP-YLENGYNQ--NHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WSP-TPRCIRVKTCSKSSIDIENGFIS 142 (187)
T ss_dssp -EEECC-CCTTEECS--CTTCEEETTCEEECEECTTEECSSSCSEEEEETTE-EES-CSCCEECCEEEGGGCCCSSEECC
T ss_pred -cCcCC-CCCccEEc--CCCccccCCCEEEEEcCCCCCccCCCeEEEecCCC-cCC-CCceeecccCCCCCccccCceEc
Confidence 79875 56799864 23567889999999999999997 89999999999 998 79999 4 7998 5789999887
Q ss_pred cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531 170 PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217 (222)
Q Consensus 170 ~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~ 217 (222)
..+..|.+|+.|+|.|++||.+.|...+ ..++|+.+| |++ .|+|+
T Consensus 143 ~~~~~y~~g~~v~~~C~~Gy~l~g~~~s-~~~~C~~~g-Ws~-~P~Ci 187 (187)
T 2uwn_A 143 ESQYTYALKEKAKYQCKLGYVTADGETS-GSITCGKDG-WSA-QPTCI 187 (187)
T ss_dssp SCCSEEETTCEEEEEECTTCCCSSSCSE-EEEEEETTE-ESC-CCCCC
T ss_pred CCCccCcCCCEEEEECCCCCEecCCCCc-CeEEECCCC-cCC-CCccC
Confidence 6566788899999999999999874111 579999999 999 89984
No 27
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.97 E-value=4.3e-31 Score=243.17 Aligned_cols=177 Identities=27% Similarity=0.494 Sum_probs=153.6
Q ss_pred eeEEeeCC-CCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCC---------CCceeccceeee
Q psy14531 19 TCQQIICP-KIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGA---------IPECNAFFFFFF 87 (222)
Q Consensus 19 ~C~~~~C~-~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~---------~p~C~~~~~~~~ 87 (222)
.|..+.|+ .+.. .||.+.. +.+|++++|+|+.||.|.|+..++|+.+|+|+.. .|.|+.
T Consensus 6 ~c~~~~C~~~~~~~~~g~~~~----~~~g~~~~y~C~~Gy~l~g~~~~~C~~~g~Ws~~~~~~~~~~~~p~C~~------ 75 (741)
T 3hrz_D 6 ARPQGSCSLEGVEIKGGSFRL----LQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRA------ 75 (741)
T ss_dssp -----CCCCTTCCCBTSEEEE----EGGGTEEEEECCTTEEEESCSEEEBCTTSCBCCEECTTCCEESCCEEEE------
T ss_pred cCCCCCCCCCCccCCCCeeee----ccCCCEEEEEeCCCCEECCCCeEEECCCCcCCCCCcccccCcCCCeEEe------
Confidence 68889999 5544 8888864 4589999999999999999999999999999974 789999
Q ss_pred ecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee---ecCCCCCCCC
Q psy14531 88 FFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQ 164 (222)
Q Consensus 88 ~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~---~~C~~p~~~~ 164 (222)
+.|+.|+.+.||.+.. ....|.+|++++|+|+.||.|.|+..++|+.+|+|++..|.|+ ..|+.|..+.
T Consensus 76 ------~~C~~p~~~~ng~~~~--~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C~~~~~~C~~p~~~~ 147 (741)
T 3hrz_D 76 ------IHCPRPHDFENGEYWP--RSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPI 147 (741)
T ss_dssp ------CEECCCSCCTTEEEEC--CCSSEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEECSCSSSCCCCCCT
T ss_pred ------eECcCCCCCCCCEEec--cCCCcccCCEEEEEECCCCccCCCcceEecCCCeEccCcCeeeccCCcCCCCCCCC
Confidence 8999999999999864 3567899999999999999999999999999999999999999 5799998777
Q ss_pred CeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 165 NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 165 ~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
++.... ..|.+|+.|+|.|++||.+.|+ ..++|+.+|+|+++.|+|.+.
T Consensus 148 ~~~~~~--~~~~~g~~v~~~C~~gy~l~G~----~~~~C~~~g~Ws~~~p~C~~~ 196 (741)
T 3hrz_D 148 GTRKVG--SQYRLEDSVTYHCSRGLTLRGS----QRRTCQEGGSWSGTEPSCQDS 196 (741)
T ss_dssp TEEEEC--CCCSTTCEEEEEECTTSEEESC----SEEEBCTTSSBSSCCCEEECT
T ss_pred CCeeeC--CccccCCEEEEEcCCCCEEcCC----CeEEECCCCEEeCCCccccCC
Confidence 776654 3577899999999999999998 889999999999999999985
No 28
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=99.97 E-value=4.7e-31 Score=262.27 Aligned_cols=199 Identities=26% Similarity=0.595 Sum_probs=175.5
Q ss_pred CceEeccCCc---cCCCCCeeEEeeCCCCcc-CCCeEEecc-CCcccccEEEEEcCCC------CeEeCCCceEeCCC--
Q psy14531 3 HPVFRVSQGQ---WSGEVPTCQQIICPKIVV-ENPYLTLVE-QNNTYRGHAIFQCSWG------YQLKGPPDIVCQKN-- 69 (222)
Q Consensus 3 ~~~~c~~~g~---Ws~~~p~C~~~~C~~p~~-~ng~~~~~~-~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~-- 69 (222)
..++|+.+|+ |+...|.|+++.|+.|+. +||.+.... ..|.+|++|+|+|+.| |.|.|...++|+.+
T Consensus 550 ~~~~C~~~g~~~~Ws~~~P~C~~v~C~~p~~i~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~ 629 (1931)
T 2q7z_A 550 SSAECILSGNAAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDD 629 (1931)
T ss_pred cceEEEeCCCeeecCCCCceeEeeeCCCCCCcCCceEECCCCCCcccCCEEEEEECCCCCcccceEEeCCceeEeCCCCC
Confidence 4589999986 999999999999999877 999987543 4578999999999999 77999999999987
Q ss_pred --CeeeCCCCcee-ccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCee
Q psy14531 70 --GSWSGAIPECN-AFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRW 146 (222)
Q Consensus 70 --g~W~~~~p~C~-~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~W 146 (222)
|+|+.+.|.|+ . +.|+ ++.+.||.+... ....|.+|++|+|+|+.||.|.|+..++|+++|+|
T Consensus 630 ~~G~Ws~~~P~C~~~------------~~C~-~P~i~nG~~~~~-~~~~y~~g~~v~f~C~~Gy~l~G~~~~~C~~~g~W 695 (1931)
T 2q7z_A 630 QVGIWSGPAPQCIIP------------NKCT-PPNVENGILVSD-NRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKW 695 (1931)
T ss_pred cCceECCCCCcCCcC------------cccC-CCcccCCeEecC-CCcccccCCEEEEEcCCCceEcCCCceEECCCCcC
Confidence 99999999999 6 7995 455679987532 35678999999999999999999999999999999
Q ss_pred eCCCCceeecCCCCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 147 SRAPPRCKARCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 147 s~~~p~C~~~C~~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
+...|.|++.|..|+.+.||.+... +..|.+|+.|+|.|+.||.+.|+ ..++|+.+|+|++..|+|+.+
T Consensus 696 s~~~P~C~~~C~~~p~~~~g~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~----~~~~C~~~G~Ws~~~P~C~~~ 765 (1931)
T 2q7z_A 696 EPELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGA----ASMRCTPQGDWSPAAPTCEVK 765 (1931)
T ss_pred CCCCCccccccCCCCCCCCcccccCCCCcccCCCEEEEECCCCCeeCCC----CeeEECCCCeECCCCCccccc
Confidence 9988999999999989999987643 45788999999999999999988 789999999999999999864
No 29
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=99.97 E-value=8.9e-31 Score=223.57 Aligned_cols=181 Identities=24% Similarity=0.429 Sum_probs=155.6
Q ss_pred EeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEe-C-CCceEeCCCCeeeCCCCceeccceeeeecccccccCC
Q psy14531 22 QIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLK-G-PPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCP 97 (222)
Q Consensus 22 ~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~-G-~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~ 97 (222)
...|+.|+. +||.+... ...|.+|+.|+|+|+.||.|. | ...++|+.||+|+...|.|+. .|.
T Consensus 33 ~~~C~~PP~i~ng~~~~~~~~~y~~G~~v~y~C~~Gy~l~~G~~~~~~C~~dG~Ws~~~p~C~~-------------~C~ 99 (381)
T 3iyp_F 33 WQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-------------SCE 99 (381)
T ss_dssp -CEECSCCCCTTEEECCTTCSCEETTCEEEEEECTTEEECTTSCCEEEEETTTEECCCCCCEEE-------------BCC
T ss_pred cccCcCCCCCCCCEEecCCCccccCCCEEEEEcCCCCEecCCCCCeEEECCCCcccccCCcccc-------------cCC
Confidence 346999887 99988643 346788999999999999997 6 468999999999998899987 899
Q ss_pred CCCCCCCceEEeC-CCCCCcCCCCEEEEEcCCCCEEcC--CCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCcc
Q psy14531 98 VPALPLNGHLIED-PTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKF 173 (222)
Q Consensus 98 ~p~~~~~g~~~~~-~~~~~~~~g~~~~~~C~~gy~~~g--~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~ 173 (222)
.|+.+.|+.+... .....|.+|++++|+|+.||.+.| ...++|+++|+|+...|.|+ +.|..|+.+.||.+... .
T Consensus 100 ~P~~~~~g~~~~~~~~~~~~~~Gs~v~y~C~~GY~l~g~~~~~~tC~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~ 178 (381)
T 3iyp_F 100 VPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVP-G 178 (381)
T ss_dssp SCCCCSSEEECTTGGGCCCCBTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCCCSEEECBCCCCCCCTTEEEECS-S
T ss_pred CCccccCCcccccccCCCcccCCCEEEEEcCCCcccCCCCCceEEecCCCcCcccCceeccccCCCCCccCCCceecC-C
Confidence 9998888876422 125678999999999999999987 57899999999999899999 79999999999998754 2
Q ss_pred ccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccCCCCceeeCc
Q psy14531 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSLDIPHCTNYT 220 (222)
Q Consensus 174 ~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~~~p~C~~~~ 220 (222)
.|.+|+.|+|.|++||.+.|. ..++|+.+| +|++..|.|+++.
T Consensus 179 ~~~~Gs~v~y~C~~GY~L~G~----~~~~C~~~G~~~~Ws~~~P~C~~v~ 224 (381)
T 3iyp_F 179 GILFGATISFSCNTGYKLFGS----TSSFCLISGSSVQWSDPLPECREIY 224 (381)
T ss_dssp CSBTTCEEEEEECTTEEEESC----SEEEEEEETTEEEESSCCCEEEECB
T ss_pred CcCcCCEEEEEeCCCcccCCc----cceEEecCCCcceEcCCCCeeeeee
Confidence 456799999999999999988 899999888 8999999999874
No 30
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=258.22 Aligned_cols=199 Identities=23% Similarity=0.556 Sum_probs=176.8
Q ss_pred CCceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCe---eeCCCC
Q psy14531 2 THPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIP 77 (222)
Q Consensus 2 ~~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~---W~~~~p 77 (222)
+..++|+.+|+|+...|.|+++.|..|+. .||.+.. ...+.+|+.|+|+|+.||.|.|...++|+.+|+ |+.+.|
T Consensus 940 ~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~-~~~~~~gs~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P 1018 (1931)
T 2q7z_A 940 PFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHV-ITDIQVGSRINYSCTTGHRLIGHSSAECILSGNTAHWSTKPP 1018 (1931)
T ss_pred CceeEeCCCCccCCCCCeeeccccCCCCCCCCceeec-cCCcccCCEEEEEeCCCcEECCccceEEEeCCcccccCCCCc
Confidence 35789999999999999999999999988 9999854 356889999999999999999999999998888 999999
Q ss_pred ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----Ceee
Q psy14531 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWS 147 (222)
Q Consensus 78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws 147 (222)
.|+. +.|+.|+.+.||.+... ....|.+|++|+|+|+.| |.|+|...++|+++ |+|+
T Consensus 1019 ~C~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws 1085 (1931)
T 2q7z_A 1019 ICQR------------IPCGLPPTIANGDFIST-NRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWS 1085 (1931)
T ss_pred eeee------------ecCCCCCCCCCCceecc-cCCcccCCCEEEEEcCCCCCccceeEEcCCcceEEecCCCccceec
Confidence 9999 89999999999988643 246789999999999999 89999999999988 9999
Q ss_pred CCCCcee--ecCCCCCCCCCeEEe-cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 148 RAPPRCK--ARCEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 148 ~~~p~C~--~~C~~p~~~~~g~~~-~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
+..|.|+ ..|..| .+.||.+. ..+..|.+|++|+|.|++||.+.|. ..++|+.+|+|++.+|+|+++
T Consensus 1086 ~~~P~C~~~~~C~~p-~~~ng~~~~~~~~~y~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~~ 1155 (1931)
T 2q7z_A 1086 GPAPQCIIPNKCTPP-NVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGP----RRVKCQALNKWEPELPSCSRV 1155 (1931)
T ss_pred CCCCCCccCCcCCCC-CccCCeeecCCCccccCCCEEEEEcCCCcEecCC----ceeEECCCCeECCCCCccccc
Confidence 9999998 589876 46777665 3455688899999999999999988 789999999999999999875
No 31
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=99.96 E-value=7.6e-29 Score=197.58 Aligned_cols=154 Identities=27% Similarity=0.588 Sum_probs=129.7
Q ss_pred ceEeccCCccCC-------CCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCC
Q psy14531 4 PVFRVSQGQWSG-------EVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGA 75 (222)
Q Consensus 4 ~~~c~~~g~Ws~-------~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~ 75 (222)
.++|+.+|+|+. ..|.|+.+.|+.|.. +||.+......|.+|+.++|+|+.||.|.|+..++|+.+|+|+.+
T Consensus 41 ~~~C~~~G~Ws~~~~~~~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~ 120 (223)
T 3erb_A 41 SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGE 120 (223)
T ss_dssp EEEECTTSCEECC-------CCEEEECEEECCSCCTTEEEESCCSEEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSC
T ss_pred eeEECCCCeECCCccCCCCCCCeEeeeECcCCCCCCCCEEecCCCCccCCCEEEEEeCCCCEEcCCCceEECCCCeECCC
Confidence 489999999998 379999999999877 999998665678899999999999999999999999999999999
Q ss_pred CCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceee
Q psy14531 76 IPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA 155 (222)
Q Consensus 76 ~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~ 155 (222)
.|.|+. ..+.|+.|..+ ++.+.. ...|.+|++|+|+|+.||.|.|+..++|+++|+|++..|.|+.
T Consensus 121 ~P~C~~----------~~~~C~~p~~~-~g~~~~---~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~ 186 (223)
T 3erb_A 121 TAVCDN----------GAGHCPNPGIS-LGAVRT---GFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWSGTEPICRQ 186 (223)
T ss_dssp CCEEEC----------SCSSSCCCCCC-TTEEEE---CCCCSTTCEEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEEC
T ss_pred CCEEEe----------CCccCcCCCCC-CCcEec---CCCCCCCCEEEEEeCCCCEEcCCCceEECCCCeECCCCCEEeC
Confidence 999985 01489988654 666553 4678899999999999999999999999999999999999994
Q ss_pred --cCCCCCCCCCeEEecC
Q psy14531 156 --RCEYPGEPQNGKIIPL 171 (222)
Q Consensus 156 --~C~~p~~~~~g~~~~~ 171 (222)
.|..|+.+.+|.....
T Consensus 187 ~~~C~~P~~i~~g~~~s~ 204 (223)
T 3erb_A 187 PYSYDFPEDVAPALGTSF 204 (223)
T ss_dssp GGGGGCCSSCC-------
T ss_pred CccCCCccchhhhHHHHH
Confidence 8999999999887643
No 32
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=99.96 E-value=5e-28 Score=182.42 Aligned_cols=136 Identities=20% Similarity=0.499 Sum_probs=118.6
Q ss_pred eeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCC------ceEeCCCCeeeCCCCceeccceeeeeccc
Q psy14531 19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP------DIVCQKNGSWSGAIPECNAFFFFFFFFFF 91 (222)
Q Consensus 19 ~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~------~~~C~~~g~W~~~~p~C~~~~~~~~~~~~ 91 (222)
.|+.+.|+.|.. +||.+......|.+|+.|+|+|+.||.|.|.. .++|+.+|+|+.+.|.|+.
T Consensus 2 s~~~i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~---------- 71 (155)
T 3gov_A 2 SMTGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKI---------- 71 (155)
T ss_dssp ---CCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEE----------
T ss_pred CccceeCCCCCCCCCCEEecCCCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCCCeeeE----------
Confidence 478899999988 99999877678999999999999999999876 8999999999999999999
Q ss_pred ccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC-EEc--CCCeEEeCcCCeeeC-----CCCceeecCCCCCCC
Q psy14531 92 NPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH-HLL--GEETIVCTETGRWSR-----APPRCKARCEYPGEP 163 (222)
Q Consensus 92 ~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy-~~~--g~~~~~C~~~g~Ws~-----~~p~C~~~C~~p~~~ 163 (222)
+.|+.|+.+.||.+........|.+|++|+|+|+.|| .|. |+..++|+++|+|++ ..|.|+..|+.|..+
T Consensus 72 --~~C~~p~~~~nG~~~~~~~~~~~~~g~~v~y~C~~Gy~~l~~~G~~~~~C~~~G~Ws~~~~~~~~P~C~~vC~~P~~p 149 (155)
T 3gov_A 72 --VDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYKMLNNNTGIYTCSAQGVWMNKVLGRSLPTCLPVCGLPKFS 149 (155)
T ss_dssp --CBCCSCCCCTTEEEEESSTTCCCBTTCEEEEEECTTTEEECTTCCCEEEECTTSCEEBTTTBTSCCCEEECCSCCSSC
T ss_pred --ccCCCCCCCcCceEEecCCCCccccCCEEEEEeCCChhhhccCCCceEEECCCCeECCCcCCCCCCcCCCccCCCCCC
Confidence 8999999999999875444677899999999999997 787 789999999999998 799999669999876
Q ss_pred CCe
Q psy14531 164 QNG 166 (222)
Q Consensus 164 ~~g 166 (222)
.++
T Consensus 150 ~~~ 152 (155)
T 3gov_A 150 RKL 152 (155)
T ss_dssp CC-
T ss_pred hhh
Confidence 543
No 33
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.5e-26 Score=174.97 Aligned_cols=133 Identities=28% Similarity=0.557 Sum_probs=114.8
Q ss_pred eeCCCCcc-CCCeEEe-ccCCcccccEEEEEcCCCCeEeC------CCceEeCCCCeeeCCCCceeccceeeeecccccc
Q psy14531 23 IICPKIVV-ENPYLTL-VEQNNTYRGHAIFQCSWGYQLKG------PPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV 94 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~-~~~~~~~g~~~~~~C~~gy~l~G------~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~ 94 (222)
+.|+.|+. +||.+.. ....|.+|++|+|+|+.||.|.| +..++|+.+|+|+.+.|.|+. +
T Consensus 3 ~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~------------~ 70 (159)
T 2qy0_A 3 QACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI------------K 70 (159)
T ss_dssp CBCCCCCCCSTTEEEETCCSSCBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCCCEEEE------------C
T ss_pred ccCcCCCCCCCCcEecCCCCccccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCCCCcccc------------c
Confidence 57999987 9997643 34678999999999999999987 479999999999999999998 8
Q ss_pred cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc----CC-----CeEEeCcCCeeeCC-----CCceeecCCCC
Q psy14531 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL----GE-----ETIVCTETGRWSRA-----PPRCKARCEYP 160 (222)
Q Consensus 95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~----g~-----~~~~C~~~g~Ws~~-----~p~C~~~C~~p 160 (222)
.|+.|+.+.||.+........+.+|++|+|+|+.||.+. |. ..++|+++|+|+.. .|.|+..|+.|
T Consensus 71 ~C~~p~~~~nG~~~~~~~~~~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~~~~~~~~P~C~~~C~~p 150 (159)
T 2qy0_A 71 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKP 150 (159)
T ss_dssp BCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTSSEEBTTTBTSCCCEEECCSCC
T ss_pred cCCCCCCCCCCeeEeccCCCCcccCCEEEEECCCcceecccccCccccCCccEEECCCccCCCCCCCccCCceeCCCCCC
Confidence 999999999999875433467889999999999999865 53 78999999999997 99999669999
Q ss_pred CCCCCeE
Q psy14531 161 GEPQNGK 167 (222)
Q Consensus 161 ~~~~~g~ 167 (222)
..+.||.
T Consensus 151 ~~p~~g~ 157 (159)
T 2qy0_A 151 VNPVEQR 157 (159)
T ss_dssp SSCSSCC
T ss_pred CCCcccc
Confidence 9988874
No 34
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=99.93 E-value=2e-25 Score=162.88 Aligned_cols=121 Identities=26% Similarity=0.497 Sum_probs=107.8
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCc
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLK 172 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~ 172 (222)
+.|+.|+.+.||.+........|.+|++++|+|+.|| |.|...++|+.+|+|+...|.|+ +.|+.|+.+.||.+...
T Consensus 4 ~~C~~p~~~~ng~~~~~~~~~~~~~g~~~~y~C~~Gy-l~G~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~- 81 (128)
T 1gkn_A 4 AHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEY-YGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVI- 81 (128)
T ss_dssp CEECCCCCCSSEEECSCCCCSSEESSCEEEEEECTTE-ESCCEEEEBCSSSCBCCCCSCCEECBCCCCCCCTTEEEEES-
T ss_pred ccCcCCCCCCCCEEeccCcCCCcCCCCEEEEEcCCCC-cCCCCceEECCCCcCCCCCCeEcceECcCCCCCCCcEEEec-
Confidence 6899999999999874322357999999999999999 99999999999999998899999 69999999999998754
Q ss_pred cccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCc---ccCCCCceeeCc
Q psy14531 173 FFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHCTNYT 220 (222)
Q Consensus 173 ~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~---W~~~~p~C~~~~ 220 (222)
..|..|+.|+|.|++||.+.|+ ..++|+.+|+ |++++|.|+++.
T Consensus 82 ~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~~~~Ws~~~P~C~~i~ 128 (128)
T 1gkn_A 82 TDIQVGSRITYSCTTGHRLIGH----SSAECILSGNTAHWSTKPPICQRIP 128 (128)
T ss_dssp SCCBTTCEEEEEECTTEECCSC----SEEEEEECSSSEEESSCCCCCEECC
T ss_pred cCCccCCEEEEEeCCCCEEccC----CceEEcCCCCcCCccCCCCEeeECC
Confidence 3567799999999999999988 7899999999 999999999873
No 35
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=99.93 E-value=1.9e-25 Score=164.72 Aligned_cols=122 Identities=25% Similarity=0.567 Sum_probs=110.0
Q ss_pred eeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCe---eeCCCCceeccceeeeecccccc
Q psy14531 19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNAFFFFFFFFFFNPV 94 (222)
Q Consensus 19 ~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~---W~~~~p~C~~~~~~~~~~~~~~~ 94 (222)
.|+++.|+.|+. +||.+.. ...+.+|+.|+|+|+.||.|.|+..++|+.+|+ |+.+.|.|+. +
T Consensus 1 ~c~~~~C~~p~~~~nG~~~~-~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~------------~ 67 (136)
T 1gkg_A 1 EAEAKSCKTPPDPVNGMVHV-ITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQR------------I 67 (136)
T ss_dssp CCSCCBCCCCCCCSSCEEEC-CSCSBTTCEEEEECCSSEEECSCSEEEEEECSSSEEESSCCCCEEE------------C
T ss_pred CcccCCCcCCCCCCCCEEEC-CCCCccCCEEEEECCCCCeEcCCCceEEeCCCccccccCCCCCEEe------------e
Confidence 378889999877 9999874 467899999999999999999999999999999 9999999999 8
Q ss_pred cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeCCCCcee
Q psy14531 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSRAPPRCK 154 (222)
Q Consensus 95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~~~p~C~ 154 (222)
.|+.|+.+.||.+... ....|.+|++|+|+|+.| |.|.|+..++|+.+ |+|++..|.|+
T Consensus 68 ~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~ 136 (136)
T 1gkg_A 68 PCGLPPTIANGDFIST-NRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCI 136 (136)
T ss_dssp CCCCCCCCTTCCBCSS-CSSCCCSSCEEEBCCCCTTSCCSSCCEESCCEEECCCSSSSSCCCSCCCCEEC
T ss_pred cCCCCCCCCCCeEEcC-CCCccccCCEEEEEeCCCCCccceEEEeCCCeeEECCCCCCCCEECCCCcccC
Confidence 9999999999987632 246789999999999999 89999999999998 99999889984
No 36
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.92 E-value=1.2e-25 Score=206.81 Aligned_cols=151 Identities=28% Similarity=0.568 Sum_probs=131.6
Q ss_pred CceEeccCCccCCC---------CCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCee
Q psy14531 3 HPVFRVSQGQWSGE---------VPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSW 72 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~---------~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W 72 (222)
.+++|+.+|.|+.. .|.|+.+.|+.|+. +||.+......|.+|+.++|+|+.||.|.|+..++|+.+|+|
T Consensus 47 ~~~~C~~~g~Ws~~~~~~~~~~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~W 126 (741)
T 3hrz_D 47 QTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRW 126 (741)
T ss_dssp SEEEBCTTSCBCCEECTTCCEESCCEEEECEECCCSCCTTEEEECCCSSEETTCEEEEEECTTCEEESCSEEEBCTTSCB
T ss_pred CeEEECCCCcCCCCCcccccCcCCCeEEeeECcCCCCCCCCEEeccCCCcccCCEEEEEECCCCccCCCcceEecCCCeE
Confidence 57899999999984 78999999999987 999998766778999999999999999999999999999999
Q ss_pred eCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCc
Q psy14531 73 SGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR 152 (222)
Q Consensus 73 ~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~ 152 (222)
+++.|.|+. ..+.|+.|..+.++... ...|.+|++|+|+|+.||.|.|+..++|+.+|+|++..|.
T Consensus 127 s~~~p~C~~----------~~~~C~~p~~~~~~~~~----~~~~~~g~~v~~~C~~gy~l~G~~~~~C~~~g~Ws~~~p~ 192 (741)
T 3hrz_D 127 SGQTAICDN----------GAGYCSNPGIPIGTRKV----GSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPS 192 (741)
T ss_dssp SSCCCEEEC----------SCSSSCCCCCCTTEEEE----CCCCSTTCEEEEEECTTSEEESCSEEEBCTTSSBSSCCCE
T ss_pred ccCcCeeec----------cCCcCCCCCCCCCCeee----CCccccCCEEEEEcCCCCEEcCCCeEEECCCCEEeCCCcc
Confidence 999999984 11579999888776553 4568999999999999999999999999999999999999
Q ss_pred eee--cCCCCCCCCCeE
Q psy14531 153 CKA--RCEYPGEPQNGK 167 (222)
Q Consensus 153 C~~--~C~~p~~~~~g~ 167 (222)
|+. .|..|..+.++.
T Consensus 193 C~~~~~c~~p~~i~~~~ 209 (741)
T 3hrz_D 193 CQDSFMYDTPQEVAEAF 209 (741)
T ss_dssp EECTTCCBCHHHHHHHH
T ss_pred ccCCCcCCCCccccccc
Confidence 994 677666555443
No 37
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.92 E-value=2.8e-25 Score=208.02 Aligned_cols=166 Identities=21% Similarity=0.419 Sum_probs=125.3
Q ss_pred eCCCCccCCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC----eeeCCCCceeccceeeeecccccccCCCC
Q psy14531 24 ICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG----SWSGAIPECNAFFFFFFFFFFNPVHCPVP 99 (222)
Q Consensus 24 ~C~~p~~~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g----~W~~~~p~C~~~~~~~~~~~~~~~~C~~p 99 (222)
.|..|...+|...... .....+.| ||.|.|...++|+.+| .|+.+.|.|+. .|+.|
T Consensus 567 ~C~nP~P~~GG~~C~G-----~~~~~~~C--gy~L~G~~~~~C~~~g~~~~~Ws~~~P~C~~-------------~C~~p 626 (913)
T 3t5o_A 567 ECNNPAPQRGGKRCEG-----EKRQEEDC--TFSIMENNGQPCINDDEEMKEVDLPEIEADS-------------GCPQP 626 (913)
T ss_dssp CSCSSCCBSSCCCCCS-----CSEEEEEC--C---------CCCCCCCC-----------CC-------------CBCCC
T ss_pred ccCCCCcccCCcccCC-----CceEEEEC--CCcccccccceEeCCCCccccCCCCCCCCcC-------------cCCCC
Confidence 4998877555443322 23556899 9999999999999987 89999999988 89999
Q ss_pred CCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCccccCCC
Q psy14531 100 ALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKFFYDPG 178 (222)
Q Consensus 100 ~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~~~~~g 178 (222)
+.+.||.+.. ....|.+|++|+|+|+.||.|.|...++|+++|+|+.+.|.|+ +.|+.|+.+.++.+......|.+|
T Consensus 627 ~~~~nG~~~~--~~~~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~v~C~~P~~~~~~~~~~~~~~y~~g 704 (913)
T 3t5o_A 627 VPPENGFIRN--EKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQRLYRIG 704 (913)
T ss_dssp CCCTTEEESC--CCSCBCTTCEEEEEECTTEEEESCCEEEECTTSCEECCSCEEEECEEECCCCCSSSBCSSCCSEEETT
T ss_pred CCCCCceEec--CCCceecccEEEEEeCCCCEECCCCceEECCCCeEcCCCCeeccCcCCCCCCCCCcEecCCCCcccCC
Confidence 9999998862 3577899999999999999999999999999999999999999 689999888877766556678889
Q ss_pred CeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCce
Q psy14531 179 DHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216 (222)
Q Consensus 179 ~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C 216 (222)
+.|+|.|++||.+.|+ ..++|+.+ +|++++|.+
T Consensus 705 s~v~y~C~~Gy~l~G~----~~~~C~~~-~Ws~~~P~~ 737 (913)
T 3t5o_A 705 ESIELTCPKGFVVAGP----SRYTCQGN-SWTPPISNS 737 (913)
T ss_dssp CEEECBCCTTCEESSC----SEEECBTT-BCSCCCTTS
T ss_pred CEEEEEeCCCCEECCC----CceEECCC-EeeCCCCee
Confidence 9999999999999988 89999977 999988763
No 38
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=99.92 E-value=5.1e-25 Score=161.11 Aligned_cols=119 Identities=25% Similarity=0.683 Sum_probs=104.1
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCc----CCeeeCCCCcee-----ecCCCCCCCC
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE----TGRWSRAPPRCK-----ARCEYPGEPQ 164 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~----~g~Ws~~~p~C~-----~~C~~p~~~~ 164 (222)
+.|+.|+.+.||.+.. ....|.+|++++|+|+.||.|.|...++|+. +|+|+...|.|+ +.|+.| .+.
T Consensus 2 i~C~~p~~~~nG~~~~--~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p-~~~ 78 (130)
T 1ly2_A 2 ASCGSPPPILNGRISY--YSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEP-IVP 78 (130)
T ss_dssp CEECCCCCCTTEEECC--CCSSEETTCEEEEEECTTEEEESCSEEEEECSSSSSCEESSCCCEEEECCTTCEECCC-CCT
T ss_pred ccCCCCCCCCCCeEec--CCCcccCCCEEEEEcCCCCEEeCCCeeEEeCCCCCCCeECCCCCeeEcccCccCCcCC-CCC
Confidence 6899999999998763 2467899999999999999999999999986 899999899998 589988 566
Q ss_pred CeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCC-CCceeeC
Q psy14531 165 NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLD-IPHCTNY 219 (222)
Q Consensus 165 ~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~-~p~C~~~ 219 (222)
+|.+......|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++. +|+|+++
T Consensus 79 ~g~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~Ws~~~~P~C~~i 130 (130)
T 1ly2_A 79 GGYKIRGSTPYRHGDSVTFACKTNFSMNGN----KSVWCQANNMWGPTRLPTCVSI 130 (130)
T ss_dssp TEEEEECCSSEETTCEEEEEECTTEEEESC----SEEEECTTSSEESSCCCEEEEC
T ss_pred CCeEecCcccccCCCEEEEEeCCCCEEeCC----CceEECCCCEECCCCCccceEC
Confidence 777665434677899999999999999988 78999999999997 9999875
No 39
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=99.92 E-value=3.2e-25 Score=161.79 Aligned_cols=117 Identities=25% Similarity=0.507 Sum_probs=106.4
Q ss_pred EeeCCCCcc-CCCeEEecc--CCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531 22 QIICPKIVV-ENPYLTLVE--QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV 98 (222)
Q Consensus 22 ~~~C~~p~~-~ng~~~~~~--~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~ 98 (222)
.+.|+.|+. +||.+.... ..|.+|+.|.|+|+.|| |.|+..++|+.+|+|+.+.|.|+. +.|+.
T Consensus 3 ~~~C~~p~~~~ng~~~~~~~~~~~~~g~~~~y~C~~Gy-l~G~~~~~C~~~g~Ws~~~p~C~~------------~~C~~ 69 (128)
T 1gkn_A 3 EAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEY-YGRPFSITCLDNLVWSSPKDVCKR------------KSCKT 69 (128)
T ss_dssp CCEECCCCCCSSEEECSCCCCSSEESSCEEEEEECTTE-ESCCEEEEBCSSSCBCCCCSCCEE------------CBCCC
T ss_pred CccCcCCCCCCCCEEeccCcCCCcCCCCEEEEEcCCCC-cCCCCceEECCCCcCCCCCCeEcc------------eECcC
Confidence 357999887 999987653 56899999999999999 999999999999999999999999 89999
Q ss_pred CCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCe---eeCCCCcee
Q psy14531 99 PALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPRCK 154 (222)
Q Consensus 99 p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~---Ws~~~p~C~ 154 (222)
|+.+.||.+.. ...|.+|++++|+|+.||.|.|+..++|+.+|+ |++..|.|+
T Consensus 70 p~~~~nG~~~~---~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~ 125 (128)
T 1gkn_A 70 PPDPVNGMVHV---ITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQ 125 (128)
T ss_dssp CCCCTTEEEEE---SSCCBTTCEEEEEECTTEECCSCSEEEEEECSSSEEESSCCCCCE
T ss_pred CCCCCCcEEEe---ccCCccCCEEEEEeCCCCEEccCCceEEcCCCCcCCccCCCCEee
Confidence 99999999864 256889999999999999999999999999999 999899997
No 40
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.92 E-value=6.5e-26 Score=175.93 Aligned_cols=131 Identities=27% Similarity=0.516 Sum_probs=113.8
Q ss_pred CceEeccCCccCCCCCeeEEeeCCCCccCCCeEEeccCCcccccEEEEEcCCCCeEe-CCCceEeCCCCeeeCCCCceec
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLK-GPPDIVCQKNGSWSGAIPECNA 81 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~~ng~~~~~~~~~~~g~~~~~~C~~gy~l~-G~~~~~C~~~g~W~~~~p~C~~ 81 (222)
..++|+.+| |+...| |++ .|+.|.++||.+......|.+|+.|+|+|+.||.|. |...++|+.+| |+. .|.|+.
T Consensus 51 ~~~~C~~~g-Ws~~~~-C~~-~C~~p~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~G~~~~~C~~~g-Ws~-~P~C~~ 125 (187)
T 2uwn_A 51 DHIHCTQDG-WSPAVP-CLR-KCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WSP-TPRCIR 125 (187)
T ss_dssp EEEEEETTE-EESSSC-CEE-EEECCCCTTEECSCTTCEEETTCEEECEECTTEECSSSCSEEEEETTE-EES-CSCCEE
T ss_pred CEEEeCCCC-CCCCCC-cCC-cCcCCCCCccEEcCCCccccCCCEEEEEcCCCCCccCCCeEEEecCCC-cCC-CCceee
Confidence 378999999 998766 988 899876699988655566889999999999999996 99999999999 997 699998
Q ss_pred cceeeeecccccc-cCCC-CCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCC---CeEEeCcCCeeeCCCCcee
Q psy14531 82 FFFFFFFFFFNPV-HCPV-PALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGE---ETIVCTETGRWSRAPPRCK 154 (222)
Q Consensus 82 ~~~~~~~~~~~~~-~C~~-p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~---~~~~C~~~g~Ws~~~p~C~ 154 (222)
+ .|+. |+.+.||.+.. ....|.+|++|+|+|+.||.|.|. ..++|+++| |++ .|.|.
T Consensus 126 ------------v~~C~~~p~~~~nG~~~~--~~~~y~~g~~v~~~C~~Gy~l~g~~~s~~~~C~~~g-Ws~-~P~Ci 187 (187)
T 2uwn_A 126 ------------VKTCSKSSIDIENGFISE--SQYTYALKEKAKYQCKLGYVTADGETSGSITCGKDG-WSA-QPTCI 187 (187)
T ss_dssp ------------CCEEEGGGCCCSSEECCS--CCSEEETTCEEEEEECTTCCCSSSCSEEEEEEETTE-ESC-CCCCC
T ss_pred ------------cccCCCCCccccCceEcC--CCccCcCCCEEEEECCCCCEecCCCCcCeEEECCCC-cCC-CCccC
Confidence 7 8998 58888998742 246688899999999999999985 789999999 999 88884
No 41
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=99.92 E-value=1.8e-24 Score=157.22 Aligned_cols=117 Identities=30% Similarity=0.639 Sum_probs=105.1
Q ss_pred cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCcee-ecCCCCCCCCCeEEec
Q psy14531 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRCK-ARCEYPGEPQNGKIIP 170 (222)
Q Consensus 95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C~-~~C~~p~~~~~g~~~~ 170 (222)
.|+.|+.+.||.+... ..+.+|++++|+|+.||.|.|...++|+.+| +|+...|.|+ +.|+.|+.+.||.+..
T Consensus 2 ~C~~p~~~~nG~~~~~---~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~ 78 (125)
T 1h03_P 2 SCPNPGEIRNGQIDVP---GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQG 78 (125)
T ss_dssp BCCCCCCCTTEEEECT---TCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEETT
T ss_pred cCcCCCCCCCCEEECC---CCcCcCCEEEEECCCCCeECCCCeeEEcCCCCCCEeCCCCCcCCCCcCCCCCCCCCCEEeC
Confidence 5999999999998742 4678899999999999999999999999888 9999899999 6999999999999887
Q ss_pred CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCC---CCcccCCCCceee
Q psy14531 171 LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS---DGTWSLDIPHCTN 218 (222)
Q Consensus 171 ~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~---~G~W~~~~p~C~~ 218 (222)
....|.+|+.|+|.|++||.+.|+ ..++|+. +|+|++++|.|++
T Consensus 79 ~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~~~~G~Ws~~~P~C~~ 125 (125)
T 1h03_P 79 ERDHYGYRQSVTYACNKGFTMIGE----HSIYCTVNNDEGEWSGPPPECRG 125 (125)
T ss_dssp CCSCCBTTCEEEEEECTTCEEESC----SEEEEEEETTEEEESSCCCEEEC
T ss_pred CcCceecCCEEEEEECCCCEECCC----CeeEEecCCCCCEECCCCceecC
Confidence 656678899999999999999988 7899984 6999999999975
No 42
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=99.92 E-value=1.3e-24 Score=157.96 Aligned_cols=117 Identities=31% Similarity=0.693 Sum_probs=105.0
Q ss_pred eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCceeccceeeeecccccccCCC
Q psy14531 23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPECNAFFFFFFFFFFNPVHCPV 98 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~C~~~~~~~~~~~~~~~~C~~ 98 (222)
+.|+.|+. +||.+... ..+.+|+.|+|+|+.||.|.|+..++|+.+| +|+.+.|.|+. +.|+.
T Consensus 1 k~C~~p~~~~nG~~~~~-~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C~~------------~~C~~ 67 (125)
T 1h03_P 1 KSCPNPGEIRNGQIDVP-GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECRE------------IYCPA 67 (125)
T ss_dssp CBCCCCCCCTTEEEECT-TCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEE------------CBCCC
T ss_pred CcCcCCCCCCCCEEECC-CCcCcCCEEEEECCCCCeECCCCeeEEcCCCCCCEeCCCCCcCCC------------CcCCC
Confidence 36998877 99999864 5688999999999999999999999999888 99999999999 89999
Q ss_pred CCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCc---CCeeeCCCCcee
Q psy14531 99 PALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE---TGRWSRAPPRCK 154 (222)
Q Consensus 99 p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~---~g~Ws~~~p~C~ 154 (222)
|+.+.||.+.. ....|.+|++|+|+|+.||.|.|+..++|+. +|+|+...|.|+
T Consensus 68 p~~~~nG~~~~--~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~~~~G~Ws~~~P~C~ 124 (125)
T 1h03_P 68 PPQIDNGIIQG--ERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECR 124 (125)
T ss_dssp CCCCTTEEETT--CCSCCBTTCEEEEEECTTCEEESCSEEEEEEETTEEEESSCCCEEE
T ss_pred CCCCCCCEEeC--CcCceecCCEEEEEECCCCEECCCCeeEEecCCCCCEECCCCceec
Confidence 99999998753 2457889999999999999999999999985 699999899996
No 43
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=99.91 E-value=2e-24 Score=159.22 Aligned_cols=117 Identities=30% Similarity=0.671 Sum_probs=105.7
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCe---eeCCCCcee-ecCCCCCCCCCeEEe
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPRCK-ARCEYPGEPQNGKII 169 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~---Ws~~~p~C~-~~C~~p~~~~~g~~~ 169 (222)
+.|+.|+.+.||.+.. ...|.+|++++|+|+.||.|.|...++|+.+|+ |+...|.|+ +.|+.|+.+.||.+.
T Consensus 5 ~~C~~p~~~~nG~~~~---~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~ 81 (136)
T 1gkg_A 5 KSCKTPPDPVNGMVHV---ITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFI 81 (136)
T ss_dssp CBCCCCCCCSSCEEEC---CSCSBTTCEEEEECCSSEEECSCSEEEEEECSSSEEESSCCCCEEECCCCCCCCCTTCCBC
T ss_pred CCCcCCCCCCCCEEEC---CCCCccCCEEEEECCCCCeEcCCCceEEeCCCccccccCCCCCEEeecCCCCCCCCCCeEE
Confidence 8999999999999863 466889999999999999999999999999999 999899999 689999999999887
Q ss_pred cC-ccccCCCCeEEEEcCCC------CeeccCCCCCCcceeCCC----CcccCCCCcee
Q psy14531 170 PL-KFFYDPGDHIQVTCNDG------YVKPLDITPTSGPYCQSD----GTWSLDIPHCT 217 (222)
Q Consensus 170 ~~-~~~~~~g~~v~y~C~~g------y~~~~~~~~~~~~~C~~~----G~W~~~~p~C~ 217 (222)
.. ...|.+|+.|+|.|++| |.+.|+ ..++|+.+ |+|++++|.|+
T Consensus 82 ~~~~~~~~~g~~v~y~C~~Gy~~~~~y~l~G~----~~~~C~~~~~~~G~Ws~~~P~C~ 136 (136)
T 1gkg_A 82 STNRENFHYGSVVTYRCNLGSRGRKVFELVGE----PSIYCTSNDDQVGIWSGPAPQCI 136 (136)
T ss_dssp SSCSSCCCSSCEEEBCCCCTTSCCSSCCEESC----CEEECCCSSSSSCCCSCCCCEEC
T ss_pred cCCCCccccCCEEEEEeCCCCCccceEEEeCC----CeeEECCCCCCCCEECCCCcccC
Confidence 53 35678899999999999 888888 79999988 99999999995
No 44
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=99.91 E-value=1.8e-24 Score=158.12 Aligned_cols=122 Identities=24% Similarity=0.548 Sum_probs=103.5
Q ss_pred eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCC----CCeeeCCCCceeccceeeeecccccccCC
Q psy14531 23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK----NGSWSGAIPECNAFFFFFFFFFFNPVHCP 97 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~----~g~W~~~~p~C~~~~~~~~~~~~~~~~C~ 97 (222)
+.|+.|+. +||.+......|.+|++|+|+|+.||.|.|+..++|+. +|+|+.+.|.|+.. ...+.|+
T Consensus 2 i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~--------~~~~~C~ 73 (130)
T 1ly2_A 2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYF--------NKYSSCP 73 (130)
T ss_dssp CEECCCCCCTTEEECCCCSSEETTCEEEEEECTTEEEESCSEEEEECSSSSSCEESSCCCEEEEC--------CTTCEEC
T ss_pred ccCCCCCCCCCCeEecCCCcccCCCEEEEEcCCCCEEeCCCeeEEeCCCCCCCeECCCCCeeEcc--------cCccCCc
Confidence 67998887 99998765577899999999999999999999999986 89999999999840 0014899
Q ss_pred CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCC-CCceee
Q psy14531 98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRA-PPRCKA 155 (222)
Q Consensus 98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~-~p~C~~ 155 (222)
.|. +.++.+... ...|.+|++|+|+|+.||.|.|+..++|+++|+|++. .|.|+.
T Consensus 74 ~p~-~~~g~~~~~--~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~~P~C~~ 129 (130)
T 1ly2_A 74 EPI-VPGGYKIRG--STPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVS 129 (130)
T ss_dssp CCC-CTTEEEEEC--CSSEETTCEEEEEECTTEEEESCSEEEECTTSSEESSCCCEEEE
T ss_pred CCC-CCCCeEecC--cccccCCCEEEEEeCCCCEEeCCCceEECCCCEECCCCCccceE
Confidence 885 457776542 3478999999999999999999999999999999997 899973
No 45
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=99.91 E-value=3.3e-24 Score=161.46 Aligned_cols=121 Identities=24% Similarity=0.517 Sum_probs=106.1
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCC------eEEeCcCCeeeCCCCcee-ecCCCCCCCCCe
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRWSRAPPRCK-ARCEYPGEPQNG 166 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~------~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g 166 (222)
+.|+.|+.+.||.+... ...|.+|++|+|+|+.||.|.|.. .++|+.+|+|+...|.|+ +.|..|+.+.||
T Consensus 6 i~C~~p~~~~nG~~~~~--~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG 83 (155)
T 3gov_A 6 NECPELQPPVHGKIEPS--QAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKIVDCRAPGELEHG 83 (155)
T ss_dssp CEECCCCCCTTEEEESC--CSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEECBCCSCCCCTTE
T ss_pred eeCCCCCCCCCCEEecC--CCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCCCeeeEccCCCCCCCcCc
Confidence 89999999999998742 467899999999999999999876 899999999999899999 799999999999
Q ss_pred EEec--CccccCCCCeEEEEcCCCC-eec--cCCCCCCcceeCCCCcccC-----CCCceeeCc
Q psy14531 167 KIIP--LKFFYDPGDHIQVTCNDGY-VKP--LDITPTSGPYCQSDGTWSL-----DIPHCTNYT 220 (222)
Q Consensus 167 ~~~~--~~~~~~~g~~v~y~C~~gy-~~~--~~~~~~~~~~C~~~G~W~~-----~~p~C~~~~ 220 (222)
.+.. ....|.+|+.|+|.|++|| .+. |+ ..++|+.+|+|++ .+|.|++++
T Consensus 84 ~~~~~~~~~~~~~g~~v~y~C~~Gy~~l~~~G~----~~~~C~~~G~Ws~~~~~~~~P~C~~vC 143 (155)
T 3gov_A 84 LITFSTRNNLTTYKSEIKYSCQEPYYKMLNNNT----GIYTCSAQGVWMNKVLGRSLPTCLPVC 143 (155)
T ss_dssp EEEESSTTCCCBTTCEEEEEECTTTEEECTTCC----CEEEECTTSCEEBTTTBTSCCCEEECC
T ss_pred eEEecCCCCccccCCEEEEEeCCChhhhccCCC----ceEEECCCCeECCCcCCCCCCcCCCcc
Confidence 9873 2456778999999999998 666 55 7899999999998 799999874
No 46
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.91 E-value=3.2e-25 Score=207.64 Aligned_cols=191 Identities=17% Similarity=0.265 Sum_probs=139.6
Q ss_pred CceEeccCC----ccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCC
Q psy14531 3 HPVFRVSQG----QWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIP 77 (222)
Q Consensus 3 ~~~~c~~~g----~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p 77 (222)
..++|..+| .|+...|.|+. .|+.|+. +||.+......|.+|+.|+|+|+.||.|.|...++|+.+|+|+.+.|
T Consensus 598 ~~~~C~~~g~~~~~Ws~~~P~C~~-~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P 676 (913)
T 3t5o_A 598 NGQPCINDDEEMKEVDLPEIEADS-GCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDV 676 (913)
T ss_dssp ---CCCCCCCC-----------CC-CBCCCCCCTTEEESCCCSCBCTTCEEEEEECTTEEEESCCEEEECTTSCEECCSC
T ss_pred ccceEeCCCCccccCCCCCCCCcC-cCCCCCCCCCceEecCCCceecccEEEEEeCCCCEECCCCceEECCCCeEcCCCC
Confidence 458899987 89999999998 8999887 99999866667899999999999999999999999999999999999
Q ss_pred ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecC
Q psy14531 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARC 157 (222)
Q Consensus 78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C 157 (222)
.|+. +.|+.|+.+.++.+. .....|.+|++|+|+|+.||.|.|+..++|+++ +|+++.|.+ +.|
T Consensus 677 ~C~~------------v~C~~P~~~~~~~~~--~~~~~y~~gs~v~y~C~~Gy~l~G~~~~~C~~~-~Ws~~~P~~-i~C 740 (913)
T 3t5o_A 677 ECQR------------TECIKPVVQEVLTIT--PFQRLYRIGESIELTCPKGFVVAGPSRYTCQGN-SWTPPISNS-LTC 740 (913)
T ss_dssp EEEE------------CEEECCCCCSSSBCS--SCCSEEETTCEEECBCCTTCEESSCSEEECBTT-BCSCCCTTS-CCE
T ss_pred eecc------------CcCCCCCCCCCcEec--CCCCcccCCCEEEEEeCCCCEECCCCceEECCC-EeeCCCCee-eEC
Confidence 9999 899999988776552 335678899999999999999999999999988 999988764 678
Q ss_pred CCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCc--ccCCCCce
Q psy14531 158 EYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT--WSLDIPHC 216 (222)
Q Consensus 158 ~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~--W~~~~p~C 216 (222)
..++.+..+ ..........+.. ..|+.+|++-+.. ...+|..+|. |...++.|
T Consensus 741 ~~~~~~~~~-~~C~~g~~~~~s~--C~C~~p~~~c~~~---~~~~C~~~~~~~~~~~~~~C 795 (913)
T 3t5o_A 741 EKDTLTKLK-GHCQLGQKQSGSE--CICMSPEEDCSHH---SEDLCVFDTDSNDYFTSPAC 795 (913)
T ss_dssp ECCC------CTTTTTEECSTTS--CEECCHHHHCCSC---CSEEEEEETTTTEEEEEEHH
T ss_pred cCCCCCCCC-CCCCCCcccCCCc--eEECChhhcCCCC---CCCeeccCCCCceeecccHH
Confidence 766444333 1221111122333 4899999865542 4679987765 66555666
No 47
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=1.3e-24 Score=159.59 Aligned_cols=121 Identities=22% Similarity=0.507 Sum_probs=106.1
Q ss_pred ccCCCCCCCCCceEEeC-CCCCCcCCCCEEEEEcCCCC-EEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEec
Q psy14531 94 VHCPVPALPLNGHLIED-PTGGPYRVGAILQFACNDRH-HLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIP 170 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~-~~~~~~~~g~~~~~~C~~gy-~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~ 170 (222)
|.|+.|+.+.||.+... .....|.+|++|+|+|+.|| .+.|+..++|+.+|+|+. .|.|+ +.|+.|+.+.||.+..
T Consensus 1 v~C~~Pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~~l~G~~~~~C~~~G~Ws~-~p~C~~~~C~~p~~~~nG~~~~ 79 (133)
T 2a55_A 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY-NTFCIYKRCRHPGELRNGQVEI 79 (133)
T ss_dssp CCCCSCCCCTTCBCCSSCTTCSCCCTTCCCCCBCCTTEESCCSCCCCEECSSSSEEC-CCCSEECBCCCCCCCTTBCCCC
T ss_pred CcCCCCCCCCcceEccccccCCccCCCCEEEEEeCCCCcccCCCCEEEECCCCeECC-CCcCccCCCcCCCccCCceEEc
Confidence 47999999999987642 12467899999999999999 788999999999999999 99999 7999999999998775
Q ss_pred CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccCCCCceeeCc
Q psy14531 171 LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSLDIPHCTNYT 220 (222)
Q Consensus 171 ~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~~~p~C~~~~ 220 (222)
. ..|..|+.|+|.|++||.+.|+ ..++|+.+| +|++++|.|....
T Consensus 80 ~-~~~~~g~~v~~~C~~Gy~L~G~----~~~~C~~~G~~~~Ws~~~p~C~~~~ 127 (133)
T 2a55_A 80 K-TDLSFGSQIEFSCSEGFFLIGS----TTSRCEVQDRGVGWSHPLPQCEILE 127 (133)
T ss_dssp C-STTBSSCBCCCCBCTTCBCCSC----SCCBCCCCSSSCCCSCCCCCCBCCS
T ss_pred C-CCCcCCCEEEEEcCCCCEEcCC----CeeEecCCCCCCEeCCCCccccccc
Confidence 3 3567799999999999999988 789999999 8999999998753
No 48
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=99.90 E-value=3.5e-23 Score=156.50 Aligned_cols=126 Identities=26% Similarity=0.475 Sum_probs=105.3
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcC------CCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCe
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG------EETIVCTETGRWSRAPPRCK-ARCEYPGEPQNG 166 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g------~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g 166 (222)
+.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.| ...++|+.+|+|+...|.|+ +.|+.|+.+.||
T Consensus 3 ~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG 81 (159)
T 2qy0_A 3 QACPQPKTLDEFTIIQN-LQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNG 81 (159)
T ss_dssp CBCCCCCCCSTTEEEET-CCSSCBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCCCEEEECBCCSCCCCTTE
T ss_pred ccCcCCCCCCCCcEecC-CCCccccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCCCCccccccCCCCCCCCCC
Confidence 68999999999976542 35678999999999999999997 47899999999999899999 799999999999
Q ss_pred EEecC--ccccCCCCeEEEEcCCCCeeccC--CCC---CCcceeCCCCcccCC-----CCceeeCc
Q psy14531 167 KIIPL--KFFYDPGDHIQVTCNDGYVKPLD--ITP---TSGPYCQSDGTWSLD-----IPHCTNYT 220 (222)
Q Consensus 167 ~~~~~--~~~~~~g~~v~y~C~~gy~~~~~--~~~---~~~~~C~~~G~W~~~-----~p~C~~~~ 220 (222)
.+... ...|..|+.|+|.|++||++... +.. ...++|+.+|+|+++ +|.|++++
T Consensus 82 ~~~~~~~~~~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~~~~~~~~P~C~~~C 147 (159)
T 2qy0_A 82 DFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVC 147 (159)
T ss_dssp EEEESSSTTCCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTSSEEBTTTBTSCCCEEECC
T ss_pred eeEeccCCCCcccCCEEEEECCCcceecccccCccccCCccEEECCCccCCCCCCCccCCceeCCC
Confidence 98753 34567799999999999986521 100 157999999999998 99999874
No 49
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=3.5e-23 Score=176.57 Aligned_cols=133 Identities=23% Similarity=0.506 Sum_probs=113.5
Q ss_pred eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeC----CCCeeeCCCCceeccceeeeecccccccCC
Q psy14531 23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCP 97 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~----~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~ 97 (222)
+.|+.|+. +||.+......|.+|+.|+|+|+.||.|.|...++|+ .+|+|+++.|.|+.. ...+.|+
T Consensus 2 i~C~~p~~~~nG~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~--------~~~~~C~ 73 (376)
T 2aty_A 2 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYF--------NKYSSCP 73 (376)
T ss_pred CCCcCCCCCCCCEEeccCCcccCCCEEEEEeCCCCEEcCCCceEEeccCCCCCeECCCCCccccc--------cCccEeC
Confidence 57999887 9999987667799999999999999999999999999 799999999999850 0013799
Q ss_pred CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeC-CCCceeecCCCCCCCCCe
Q psy14531 98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSR-APPRCKARCEYPGEPQNG 166 (222)
Q Consensus 98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~-~~p~C~~~C~~p~~~~~g 166 (222)
.|..+.++.+. ....|.+|++|+|.|+.||.|.|...++|+++|+|++ ..|.|+..|..|+.+.|+
T Consensus 74 ~p~~~~~~~~~---~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~~~~~~~~~~~ 140 (376)
T 2aty_A 74 EPIVPGGYKIR---GSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEGSIEGR 140 (376)
T ss_pred CCcCCCCeEec---CCCCccCCCEEEEECCCCCEECCCcCeEECCCCEECCCCCCEeEccCCCcccccCC
Confidence 98877565543 2467889999999999999999999999999999998 799999878877777764
No 50
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=99.90 E-value=9e-24 Score=163.95 Aligned_cols=133 Identities=26% Similarity=0.509 Sum_probs=109.6
Q ss_pred CceEeccCCccCCCCCeeEEe--eCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCc
Q psy14531 3 HPVFRVSQGQWSGEVPTCQQI--ICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPE 78 (222)
Q Consensus 3 ~~~~c~~~g~Ws~~~p~C~~~--~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~ 78 (222)
..++|+ +|+|+. .|.|+.+ .|+.|+. +||.+... ...|.+|+.|+|+|+.||.|.|+..++|+ +|+|+. .|.
T Consensus 44 ~~~~C~-~g~Ws~-~p~C~~~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~-~G~Ws~-~P~ 119 (188)
T 3sw0_X 44 EEVMCL-NGNWTE-PPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWSE-PPK 119 (188)
T ss_dssp SEEEEE-TTEECC-CCEEECTTCCBCSCCCCTTEEESSCCCSCBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCE
T ss_pred CEEEeC-CCEeCC-CCccCcCCCcCCCCCccCCCeEecCCCCcccCCCEEEEEcCCCCEECCCCeEEcC-CCccCC-CCc
Confidence 468899 999996 5999987 8998777 99988753 35678899999999999999999999999 999997 599
Q ss_pred eeccceeeeecccccccCCCCCCCCCc---eEEeCCCCCCc-CCCCEEEEEcCCCCEEcCCC---eEEeCcCCeeeCCCC
Q psy14531 79 CNAFFFFFFFFFFNPVHCPVPALPLNG---HLIEDPTGGPY-RVGAILQFACNDRHHLLGEE---TIVCTETGRWSRAPP 151 (222)
Q Consensus 79 C~~~~~~~~~~~~~~~~C~~p~~~~~g---~~~~~~~~~~~-~~g~~~~~~C~~gy~~~g~~---~~~C~~~g~Ws~~~p 151 (222)
|+. .|+.|..+.++ .+........| .+|++|+|+|+.||.|.|+. .++|+ +|+| ..|
T Consensus 120 C~~-------------~C~~p~~~~~~~~~~~~~~~~~~~y~~~g~~v~~~C~~Gy~l~G~~~~~~~~C~-~g~w--~~P 183 (188)
T 3sw0_X 120 CLH-------------PCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCW-DGKL--EYP 183 (188)
T ss_dssp EEC-------------CEECCHHHHHHHTEEESCCSSCCCEECTTCEEEEEECTTCEECTTCCCSEEECB-TTBC--CCC
T ss_pred ccc-------------cCCCChHHhccCceeeeccccccccccCCCEEEEECCCCceeCCCCCCeEeEcC-CCcE--eCC
Confidence 988 79988766543 22211223444 78999999999999999988 89998 8999 478
Q ss_pred ceee
Q psy14531 152 RCKA 155 (222)
Q Consensus 152 ~C~~ 155 (222)
.|+.
T Consensus 184 ~C~~ 187 (188)
T 3sw0_X 184 TCAK 187 (188)
T ss_dssp CEEC
T ss_pred ceec
Confidence 8863
No 51
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=1.1e-24 Score=160.06 Aligned_cols=116 Identities=21% Similarity=0.432 Sum_probs=104.2
Q ss_pred eeCCCCcc-CCCeEEec---cCCcccccEEEEEcCCCC-eEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCC
Q psy14531 23 IICPKIVV-ENPYLTLV---EQNNTYRGHAIFQCSWGY-QLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCP 97 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~~---~~~~~~g~~~~~~C~~gy-~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~ 97 (222)
+.|+.|+. +||.+... ...|.+|++|+|+|+.|| .|.|+..++|+.+|+|+. .|.|+. +.|+
T Consensus 1 v~C~~Pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~~l~G~~~~~C~~~G~Ws~-~p~C~~------------~~C~ 67 (133)
T 2a55_A 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY-NTFCIY------------KRCR 67 (133)
T ss_dssp CCCCSCCCCTTCBCCSSCTTCSCCCTTCCCCCBCCTTEESCCSCCCCEECSSSSEEC-CCCSEE------------CBCC
T ss_pred CcCCCCCCCCcceEccccccCCccCCCCEEEEEeCCCCcccCCCCEEEECCCCeECC-CCcCcc------------CCCc
Confidence 46999888 99998753 356889999999999999 788999999999999998 999998 8999
Q ss_pred CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCcee
Q psy14531 98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRCK 154 (222)
Q Consensus 98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C~ 154 (222)
.|+.+.||.+.. ...|.+|++++|+|+.||.|.|+..++|+.+| +|++..|.|+
T Consensus 68 ~p~~~~nG~~~~---~~~~~~g~~v~~~C~~Gy~L~G~~~~~C~~~G~~~~Ws~~~p~C~ 124 (133)
T 2a55_A 68 HPGELRNGQVEI---KTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCE 124 (133)
T ss_dssp CCCCCTTBCCCC---CSTTBSSCBCCCCBCTTCBCCSCSCCBCCCCSSSCCCSCCCCCCB
T ss_pred CCCccCCceEEc---CCCCcCCCEEEEEcCCCCEEcCCCeeEecCCCCCCEeCCCCcccc
Confidence 999999998753 35688999999999999999999999999999 9999999886
No 52
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.88 E-value=1.6e-22 Score=174.06 Aligned_cols=141 Identities=25% Similarity=0.498 Sum_probs=114.3
Q ss_pred cCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeE------eCCCceEeCCCCeeeCCCCceec
Q psy14531 9 SQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQL------KGPPDIVCQKNGSWSGAIPECNA 81 (222)
Q Consensus 9 ~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l------~G~~~~~C~~~g~W~~~~p~C~~ 81 (222)
++.+|+.. +.|+++.|+.|.. .||.+......|.+|++|+|+|++||.| .|+..++|+.+|+|+.+.|.|+.
T Consensus 2 ~~~gw~~~-~~c~~~~C~~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~~g~Ws~~~p~C~~ 80 (403)
T 1zjk_A 2 SMTGWKIH-YTSTAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACSI 80 (403)
T ss_dssp ------------CCCCBCCCCCCTTEEESSCCSCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCSSSSBSSCCCEEEE
T ss_pred CCCceEEE-EEECCccCcCCCCCCCceEcccCCccccCCEEEEEeCCCCEEccCCCcCCceeeEcCCCCEeCCCCCCccc
Confidence 45679965 5899999999988 9999987767899999999999999999 46678999999999999999999
Q ss_pred cceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC-EEcCC-CeEEeCcCCeeeC-----CCCcee
Q psy14531 82 FFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH-HLLGE-ETIVCTETGRWSR-----APPRCK 154 (222)
Q Consensus 82 ~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy-~~~g~-~~~~C~~~g~Ws~-----~~p~C~ 154 (222)
+.|+.|+.+.||.+........+.+|++++|+|+.|| .+.+. ..++|..+|+|+. ..|.|+
T Consensus 81 ------------~~C~~p~~~~ng~~~~~~~~~~~~~g~~v~~~C~~gyy~l~~~~~~~~C~~~g~W~~~~~~~~~p~C~ 148 (403)
T 1zjk_A 81 ------------VDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCE 148 (403)
T ss_dssp ------------CBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEESSCSEEEECTTSCEEETTCCCSCCEEE
T ss_pred ------------ccCCCCCCcCCccEEEccCCCCCccCCeEEEeCCCchhheecCCCCEEECCCcccccccCCccCCCCC
Confidence 8999999999998875444566888999999999996 66666 7899999999986 478999
Q ss_pred ecCCCCCC
Q psy14531 155 ARCEYPGE 162 (222)
Q Consensus 155 ~~C~~p~~ 162 (222)
..|+.+..
T Consensus 149 ~~CG~~~~ 156 (403)
T 1zjk_A 149 PVCGLSAR 156 (403)
T ss_dssp ECCCCCSS
T ss_pred CCCCCCCC
Confidence 99998754
No 53
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=99.88 E-value=4e-23 Score=150.86 Aligned_cols=120 Identities=24% Similarity=0.523 Sum_probs=98.5
Q ss_pred cccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecCCCCCCCCCeE-Ee--
Q psy14531 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGK-II-- 169 (222)
Q Consensus 93 ~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C~~p~~~~~g~-~~-- 169 (222)
.+.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|...++|+ +|+|+ ..|.|+..|..|..+.||. +.
T Consensus 4 ~~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws-~~p~C~~~C~~p~~~~~g~~i~~~ 80 (129)
T 3r62_A 4 FGKCGPPPPIDNGDITSF-PLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWS-EPPKCLHPCVISREIMENYNIALR 80 (129)
T ss_dssp -CCBCSCCCBTTEEESSC-CCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEEC-CCCEEECCEECCHHHHHHHTEEET
T ss_pred cccCcCCCCCCCCEEecC-CCCcCCCCCEEEEECCCCCEeCCCCeeEcC-CCcCC-CCCCccCcCCCChhhhcccceeee
Confidence 478999999999988642 356789999999999999999999999999 99999 6899999999987677762 32
Q ss_pred --cCcccc-CCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 170 --PLKFFY-DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 170 --~~~~~~-~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
.....| .+|+.|+|.|++||.+.|+... ..++|+ +|+| .+|+|+..
T Consensus 81 ~~~~~~~y~~~g~~v~f~C~~Gy~l~G~~~~-~~~~C~-~G~W--~~P~C~~k 129 (129)
T 3r62_A 81 WRAKQKLYSRTGESVEFVCKRGYRLSSRSHT-LRTTCW-DGKL--EYPTCAKR 129 (129)
T ss_dssp TTTTCCSEECTTCEEEEEECTTEEECTTSCC-SEEECB-TTBC--CCCCEEEC
T ss_pred ecccccccccCCCEEEEEeCCCccccCCCCc-ceEEeC-CCcC--CCceeeeC
Confidence 223344 6899999999999999987211 289998 8999 58999863
No 54
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=99.86 E-value=3.6e-22 Score=145.78 Aligned_cols=117 Identities=24% Similarity=0.437 Sum_probs=96.9
Q ss_pred EEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531 21 QQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV 98 (222)
Q Consensus 21 ~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~ 98 (222)
+.+.|+.|+. +||.+... ...|.+|+.|+|+|+.||.|.|...++|+ +|+|+ +.|.|+. .|+.
T Consensus 3 ~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws-~~p~C~~-------------~C~~ 67 (129)
T 3r62_A 3 EFGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWS-EPPKCLH-------------PCVI 67 (129)
T ss_dssp --CCBCSCCCBTTEEESSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEEC-CCCEEEC-------------CEEC
T ss_pred ccccCcCCCCCCCCEEecCCCCcCCCCCEEEEECCCCCEeCCCCeeEcC-CCcCC-CCCCccC-------------cCCC
Confidence 3568999887 99998753 35788999999999999999999999999 99999 7899988 7998
Q ss_pred CCCCCCce-EEe--CCCCCCc-CCCCEEEEEcCCCCEEcCCC---eEEeCcCCeeeCCCCceee
Q psy14531 99 PALPLNGH-LIE--DPTGGPY-RVGAILQFACNDRHHLLGEE---TIVCTETGRWSRAPPRCKA 155 (222)
Q Consensus 99 p~~~~~g~-~~~--~~~~~~~-~~g~~~~~~C~~gy~~~g~~---~~~C~~~g~Ws~~~p~C~~ 155 (222)
|+.+.||. +.. ......| .+|++|+|.|+.||.|.|+. .++|+ +|+| ..|.|+.
T Consensus 68 p~~~~~g~~i~~~~~~~~~~y~~~g~~v~f~C~~Gy~l~G~~~~~~~~C~-~G~W--~~P~C~~ 128 (129)
T 3r62_A 68 SREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCW-DGKL--EYPTCAK 128 (129)
T ss_dssp CHHHHHHHTEEETTTTTCCSEECTTCEEEEEECTTEEECTTSCCSEEECB-TTBC--CCCCEEE
T ss_pred ChhhhcccceeeeecccccccccCCCEEEEEeCCCccccCCCCcceEEeC-CCcC--CCceeee
Confidence 87777772 321 1224455 68999999999999999998 99999 8999 4889974
No 55
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.86 E-value=2.7e-21 Score=164.87 Aligned_cols=120 Identities=26% Similarity=0.669 Sum_probs=104.9
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeC----cCCeeeCCCCceee-----cCCCCCCCC
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT----ETGRWSRAPPRCKA-----RCEYPGEPQ 164 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~----~~g~Ws~~~p~C~~-----~C~~p~~~~ 164 (222)
+.|+.|+.+.||.+... ...|.+|++|+|+|+.||.|.|...++|+ .+|+|++..|.|+. .|+.|..+.
T Consensus 2 i~C~~p~~~~nG~~~~~--~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p~~~~ 79 (376)
T 2aty_A 2 ISCGSPPPILNGRISYY--STPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPG 79 (376)
T ss_pred CCCcCCCCCCCCEEecc--CCcccCCCEEEEEeCCCCEEcCCCceEEeccCCCCCeECCCCCccccccCccEeCCCcCCC
Confidence 68999999999998742 46789999999999999999999999999 79999998999984 799987666
Q ss_pred CeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccC-CCCceeeCc
Q psy14531 165 NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL-DIPHCTNYT 220 (222)
Q Consensus 165 ~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~-~~p~C~~~~ 220 (222)
++.+.. ...|.+|+.|+|.|++||.+.|+ ..++|+.+|+|++ ++|+|++++
T Consensus 80 ~~~~~~-~~~~~~g~~~~~~C~~gy~l~G~----~~~~C~~~g~Ws~~~~p~C~~~~ 131 (376)
T 2aty_A 80 GYKIRG-STPYRHGDSVTFACKTNFSMNGN----KSVWCQANNMWGPTRLPTCVSVF 131 (376)
T ss_pred CeEecC-CCCccCCCEEEEECCCCCEECCC----cCeEECCCCEECCCCCCEeEccC
Confidence 665544 34677899999999999999988 7899999999998 799999865
No 56
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=99.85 E-value=1.1e-22 Score=147.58 Aligned_cols=114 Identities=23% Similarity=0.535 Sum_probs=95.4
Q ss_pred ccCCCCCCCCCceEEeCC-CCCCc--CCCCEEEEEcCCCCEEcCC---CeEEeCcCCeeeCCCCceeecCCCCCCCCCeE
Q psy14531 94 VHCPVPALPLNGHLIEDP-TGGPY--RVGAILQFACNDRHHLLGE---ETIVCTETGRWSRAPPRCKARCEYPGEPQNGK 167 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~-~~~~~--~~g~~~~~~C~~gy~~~g~---~~~~C~~~g~Ws~~~p~C~~~C~~p~~~~~g~ 167 (222)
..|+.| .+.||.+.... ....| .+|++|+|+|+.||.|.|. ..++|+.+| |++ .|.|++.|+.| .+.||.
T Consensus 3 ~~C~~P-~i~nG~~~~~~~~~~~yp~~~g~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~-~p~C~~~C~~p-~~~nG~ 78 (124)
T 2yby_A 3 KPCEFP-QFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEP-EVPCVRKCVFH-YVENGD 78 (124)
T ss_dssp CCBCCC-CCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTCSSCEEEEEETTE-EES-SSCCEEEEEEC-CCBTBC
T ss_pred ccCCCC-cccCCEEEecccccccccccCCCEEEEECCCCCEeCCCCCccEEEecCCC-ccC-CCceeeECcCC-CCCCCe
Confidence 579886 78899875210 12234 8899999999999999998 899999999 999 59999999974 788998
Q ss_pred EecCccccCCCCeEEEEcCCCCeeccCCCCCC-cceeCCCCcccCCCCcee
Q psy14531 168 IIPLKFFYDPGDHIQVTCNDGYVKPLDITPTS-GPYCQSDGTWSLDIPHCT 217 (222)
Q Consensus 168 ~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~-~~~C~~~G~W~~~~p~C~ 217 (222)
+...+..|.+|+.|+|.|++||.+.|. . .++|+.+| |++ +|+|+
T Consensus 79 ~~~~~~~y~~g~~v~~~C~~Gy~l~G~----~~~~~C~~~g-Ws~-~P~C~ 123 (124)
T 2yby_A 79 SAYWEKVYVQGQSLKVQCYNGYSLQNG----QDTMTCTENG-WSP-PPKCI 123 (124)
T ss_dssp CCSSCEEEETTCEEECCBCTTCCCSSS----SCEEEEETTE-EES-CSBCC
T ss_pred EecccCcccCCCEEEEECCCCCEecCC----CCeEEcCCCC-cCC-CCeec
Confidence 866666788899999999999999887 5 48999888 998 59996
No 57
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=99.83 E-value=7.6e-22 Score=143.07 Aligned_cols=112 Identities=24% Similarity=0.456 Sum_probs=93.4
Q ss_pred eeCCCCccCCCeEEec---cCCc--ccccEEEEEcCCCCeEeCC---CceEeCCCCeeeCCCCceeccceeeeecccccc
Q psy14531 23 IICPKIVVENPYLTLV---EQNN--TYRGHAIFQCSWGYQLKGP---PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV 94 (222)
Q Consensus 23 ~~C~~p~~~ng~~~~~---~~~~--~~g~~~~~~C~~gy~l~G~---~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~ 94 (222)
+.|+.|.++||.+... ...| .+|+.|+|+|+.||.|.|. ..++|+.+| |+.. |.|+.
T Consensus 3 ~~C~~P~i~nG~~~~~~~~~~~yp~~~g~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~-p~C~~------------- 67 (124)
T 2yby_A 3 KPCEFPQFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEPE-VPCVR------------- 67 (124)
T ss_dssp CCBCCCCCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTCSSCEEEEEETTE-EESS-SCCEE-------------
T ss_pred ccCCCCcccCCEEEecccccccccccCCCEEEEECCCCCEeCCCCCccEEEecCCC-ccCC-Cceee-------------
Confidence 5699885599998743 1224 7899999999999999999 899999999 9985 99986
Q ss_pred cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCC-eEEeCcCCeeeCCCCcee
Q psy14531 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE-TIVCTETGRWSRAPPRCK 154 (222)
Q Consensus 95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~-~~~C~~~g~Ws~~~p~C~ 154 (222)
.|+. +.+.||.+. .....|.+|++|+|+|+.||.|.|.. .++|+++| |+. .|.|+
T Consensus 68 ~C~~-p~~~nG~~~--~~~~~y~~g~~v~~~C~~Gy~l~G~~~~~~C~~~g-Ws~-~P~C~ 123 (124)
T 2yby_A 68 KCVF-HYVENGDSA--YWEKVYVQGQSLKVQCYNGYSLQNGQDTMTCTENG-WSP-PPKCI 123 (124)
T ss_dssp EEEE-CCCBTBCCC--SSCEEEETTCEEECCBCTTCCCSSSSCEEEEETTE-EES-CSBCC
T ss_pred ECcC-CCCCCCeEe--cccCcccCCCEEEEECCCCCEecCCCCeEEcCCCC-cCC-CCeec
Confidence 7997 456799873 23466888999999999999999988 59999999 999 68885
No 58
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.83 E-value=2.3e-21 Score=140.72 Aligned_cols=113 Identities=23% Similarity=0.395 Sum_probs=89.1
Q ss_pred EeeCCCCccCCCeEEeccC-----CcccccEEEEEcCCCCeEeCCC---ceEeCCCCeeeCCCCceeccceeeeeccccc
Q psy14531 22 QIICPKIVVENPYLTLVEQ-----NNTYRGHAIFQCSWGYQLKGPP---DIVCQKNGSWSGAIPECNAFFFFFFFFFFNP 93 (222)
Q Consensus 22 ~~~C~~p~~~ng~~~~~~~-----~~~~g~~~~~~C~~gy~l~G~~---~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~ 93 (222)
.+.|+.|.++||.+..... .+.+|+.|+|+|+.||.|.|.. .++|+.+| |+ +.|.|.+
T Consensus 4 ~k~C~~P~i~nG~~~~~~~~~~~~p~~~G~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws-~~P~C~~------------ 69 (125)
T 4ayi_A 4 LKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WS-PAVPCLR------------ 69 (125)
T ss_dssp --CBCSCCCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EE-SSSCCEE------------
T ss_pred CccCcCCccCCCEEeccccccccccccCCCEEEEEcCCCCEECCCCccCEEEeCCCc-cc-CCCCCcC------------
Confidence 3569988779998864321 1356999999999999999875 37999887 99 5689998
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc-CCCeEEeCcCCeeeCCCCcee
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL-GEETIVCTETGRWSRAPPRCK 154 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~-g~~~~~C~~~g~Ws~~~p~C~ 154 (222)
+.|. | .+.||.+. .....|.+|++|+|+|+.||.|. |...++|+++| |+. .|.|.
T Consensus 70 ~~c~-P-~i~nG~~~--~~~~~y~~g~~v~y~C~~Gy~l~~g~~~~~C~~~g-Ws~-~P~Cv 125 (125)
T 4ayi_A 70 KCYF-P-YLENGYNQ--NHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WSP-TPRCI 125 (125)
T ss_dssp EEEC-C-CCTTBCCT--TTTCEEETTCEEECCBCTTCCCGGGCCEEEEETTE-EES-CCCCC
T ss_pred cCCC-C-CCCCCEEe--CCCCcccCCCEEEEEcCCCCEeCCCCceEEECCCc-ccC-cCEeC
Confidence 6664 3 45799764 23567899999999999999996 88999999776 996 78884
No 59
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.80 E-value=8e-21 Score=137.83 Aligned_cols=114 Identities=28% Similarity=0.589 Sum_probs=87.9
Q ss_pred ccCCCCCCCCCceEEeCCC---CCCcCCCCEEEEEcCCCCEEcCCC---eEEeCcCCeeeCCCCceeecCCCCCCCCCeE
Q psy14531 94 VHCPVPALPLNGHLIEDPT---GGPYRVGAILQFACNDRHHLLGEE---TIVCTETGRWSRAPPRCKARCEYPGEPQNGK 167 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~---~~~~~~g~~~~~~C~~gy~~~g~~---~~~C~~~g~Ws~~~p~C~~~C~~p~~~~~g~ 167 (222)
..|+.|. ++||.+..... ...+.+|++|+|+|+.||.|.|.. .++|+++| |+. .|.|...|-.| .+.||.
T Consensus 5 k~C~~P~-i~nG~~~~~~~~~~~~p~~~G~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~-~P~C~~~~c~P-~i~nG~ 80 (125)
T 4ayi_A 5 KPCDYPD-IKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSP-AVPCLRKCYFP-YLENGY 80 (125)
T ss_dssp -CBCSCC-CTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EES-SSCCEEEEECC-CCTTBC
T ss_pred ccCcCCc-cCCCEEeccccccccccccCCCEEEEEcCCCCEECCCCccCEEEeCCCc-ccC-CCCCcCcCCCC-CCCCCE
Confidence 3688765 67998753211 112467999999999999999874 47999877 996 68898444444 578998
Q ss_pred EecCccccCCCCeEEEEcCCCCeec-cCCCCCCcceeCCCCcccCCCCcee
Q psy14531 168 IIPLKFFYDPGDHIQVTCNDGYVKP-LDITPTSGPYCQSDGTWSLDIPHCT 217 (222)
Q Consensus 168 ~~~~~~~~~~g~~v~y~C~~gy~~~-~~~~~~~~~~C~~~G~W~~~~p~C~ 217 (222)
+...+..|.+|++|+|.|++||.+. |+ ..++|+++| |++ +|+|+
T Consensus 81 ~~~~~~~y~~g~~v~y~C~~Gy~l~~g~----~~~~C~~~g-Ws~-~P~Cv 125 (125)
T 4ayi_A 81 NQNHGRKFVQGKSIDVACHPGYALPKAQ----TTVTCMENG-WSP-TPRCI 125 (125)
T ss_dssp CTTTTCEEETTCEEECCBCTTCCCGGGC----CEEEEETTE-EES-CCCCC
T ss_pred EeCCCCcccCCCEEEEEcCCCCEeCCCC----ceEEECCCc-ccC-cCEeC
Confidence 8777777888999999999999986 66 789999666 995 79985
No 60
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.78 E-value=1.4e-18 Score=149.49 Aligned_cols=133 Identities=25% Similarity=0.530 Sum_probs=103.2
Q ss_pred CeeeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEE------cCCCeEEeCcC
Q psy14531 70 GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHL------LGEETIVCTET 143 (222)
Q Consensus 70 g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~------~g~~~~~C~~~ 143 (222)
+-|+. .+.|+. +.|+.|+.+.||.+.. ....|.+|++|+|+|+.||.| .|+..++|+.+
T Consensus 4 ~gw~~-~~~c~~------------~~C~~p~~~~ng~~~~--~~~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~~ 68 (403)
T 1zjk_A 4 TGWKI-HYTSTA------------HACPYPMAPPNGHVSP--VQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKD 68 (403)
T ss_dssp ----------CC------------CCBCCCCCCTTEEESS--CCSCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCSS
T ss_pred CceEE-EEEECC------------ccCcCCCCCCCceEcc--cCCccccCCEEEEEeCCCCEEccCCCcCCceeeEcCCC
Confidence 34984 578988 8999999999998853 356799999999999999999 35568999999
Q ss_pred CeeeCCCCcee-ecCCCCCCCCCeEEecC--ccccCCCCeEEEEcCCCC-eeccCCCCCCcceeCCCCcccC-----CCC
Q psy14531 144 GRWSRAPPRCK-ARCEYPGEPQNGKIIPL--KFFYDPGDHIQVTCNDGY-VKPLDITPTSGPYCQSDGTWSL-----DIP 214 (222)
Q Consensus 144 g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~--~~~~~~g~~v~y~C~~gy-~~~~~~~~~~~~~C~~~G~W~~-----~~p 214 (222)
|+|+...|.|+ +.|+.|+.+.||.+... ...+..|+.|+|.|++|| .+.+.. ..++|..+|.|+. .+|
T Consensus 69 g~Ws~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~~~g~~v~~~C~~gyy~l~~~~---~~~~C~~~g~W~~~~~~~~~p 145 (403)
T 1zjk_A 69 GSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVND---GKYVCEADGFWTSSKGEKSLP 145 (403)
T ss_dssp SSBSSCCCEEEECBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEESSC---SEEEECTTSCEEETTCCCSCC
T ss_pred CEeCCCCCCcccccCCCCCCcCCccEEEccCCCCCccCCeEEEeCCCchhheecCC---CCEEECCCcccccccCCccCC
Confidence 99999899999 69999999999987632 334566999999999997 444431 4789999999997 488
Q ss_pred ceeeCc
Q psy14531 215 HCTNYT 220 (222)
Q Consensus 215 ~C~~~~ 220 (222)
.|.+.+
T Consensus 146 ~C~~~C 151 (403)
T 1zjk_A 146 VCEPVC 151 (403)
T ss_dssp EEEECC
T ss_pred CCCCCC
Confidence 887654
No 61
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.75 E-value=9.6e-18 Score=144.02 Aligned_cols=127 Identities=29% Similarity=0.572 Sum_probs=104.7
Q ss_pred eeCCCCcc-CCCe-EEeccCCcccccEEEEEcCCCCeEe-C-----CCceEeCCCCeeeCCCCceeccceeeeecccccc
Q psy14531 23 IICPKIVV-ENPY-LTLVEQNNTYRGHAIFQCSWGYQLK-G-----PPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV 94 (222)
Q Consensus 23 ~~C~~p~~-~ng~-~~~~~~~~~~g~~~~~~C~~gy~l~-G-----~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~ 94 (222)
+.|+.|+. .||. +...+..|.+|+.|+|+|++||.|. | +..++|+.||+|+...|.|+. +
T Consensus 1 i~C~~p~~~~n~~~~~~~~~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~~p~C~~------------~ 68 (399)
T 1gpz_A 1 IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI------------K 68 (399)
T ss_dssp CCBCCCCCSSTTEEEESCCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEE------------C
T ss_pred CCCcCCCCCCCCCCcCCCCCceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCcCCceee------------e
Confidence 46999887 8954 4555678999999999999999995 4 446779999999999999998 7
Q ss_pred cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCE-EcC--------CCeEEeCcCCeeeCC-----CCceeecCCCC
Q psy14531 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH-LLG--------EETIVCTETGRWSRA-----PPRCKARCEYP 160 (222)
Q Consensus 95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~-~~g--------~~~~~C~~~g~Ws~~-----~p~C~~~C~~p 160 (222)
.|+.|+.+.||.+........+.+++.++|.|+.||. +.+ ...++|..+|.|+.. .|.|...|+.+
T Consensus 69 ~C~~p~~~~nG~~~~~~~~~~~~~~~~v~y~C~~gy~~l~~~~~~~~~~~g~~~C~~~g~w~~~~~~~~~p~C~~~CG~~ 148 (399)
T 1gpz_A 69 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKP 148 (399)
T ss_dssp BCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEEC-------CCCEEEECTTSSEEESSSCSSCCEEEECCSCC
T ss_pred eCCCCCCCCCcceEeecCCCCceeeEEEEEecCCchhccccccCcccccCceEEECCCceEeccccccccCCccCCCCCc
Confidence 9999999999987654445667889999999999993 432 467899999999864 68899899976
Q ss_pred C
Q psy14531 161 G 161 (222)
Q Consensus 161 ~ 161 (222)
.
T Consensus 149 ~ 149 (399)
T 1gpz_A 149 V 149 (399)
T ss_dssp S
T ss_pred C
Confidence 4
No 62
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*
Probab=99.70 E-value=4.1e-17 Score=126.52 Aligned_cols=117 Identities=19% Similarity=0.435 Sum_probs=90.7
Q ss_pred cC-CCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcC--CCeEEeCcCC---eeeCCCCceee-------------
Q psy14531 95 HC-PVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG--EETIVCTETG---RWSRAPPRCKA------------- 155 (222)
Q Consensus 95 ~C-~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g--~~~~~C~~~g---~Ws~~~p~C~~------------- 155 (222)
.| +.|+.+.|+.+. ...|..|++|.|.|+.||+..+ +..++|..++ +|+. .+.|..
T Consensus 2 ~C~g~PP~l~nA~~~----~~~Y~~Gt~V~Y~C~~Gf~r~~~~s~~i~C~~~~~~~~Wt~-~~fC~~~~~~~~~~~v~p~ 76 (217)
T 2b5i_D 2 LCDDDPPEIPHATFK----AMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDN-QCQCTSSATRQTTKQVTPQ 76 (217)
T ss_dssp CCCSCCCCCTTEEEE----CSSBCTTCEEECCCCTTEEECTTCCSEEEBC-----CCBSC-CCCEEEC------------
T ss_pred CCCCCCCCCcccccc----CccCCCCCEEEEECCCCceeCCCCCceEEecCCCCcccccC-CceeecccccCcccccccC
Confidence 47 678888898875 4689999999999999998774 6799997555 5988 666631
Q ss_pred --------------------------cCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCe--eccCCCCCCcceeCC-C
Q psy14531 156 --------------------------RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYV--KPLDITPTSGPYCQS-D 206 (222)
Q Consensus 156 --------------------------~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~--~~~~~~~~~~~~C~~-~ 206 (222)
.|+.|+.+.|+.+. ....|..|+.|+|.|++||. +.|. ..++|.. +
T Consensus 77 ~~e~~~~k~t~~q~~~~~~~~~n~~~~C~~PP~i~n~~l~-~~~~y~~Gs~V~Y~C~eGY~~ll~G~----~~~~C~~~~ 151 (217)
T 2b5i_D 77 PEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATE-RIYHFVVGQMVYYQCVQGYRALHRGP----AESVCKMTH 151 (217)
T ss_dssp --------------------------CBCCCCCCSSCCSS-CCEECCTTCEEEEEECTTCEEEESSC----SEEEEEECS
T ss_pred chhhccccccccccccCccccccccccCCCCCcccccccc-ccccccCCCEEEEECcCCchhcccCC----cceEeecCC
Confidence 48888888887653 45689999999999999995 5676 7899973 4
Q ss_pred C--cccCCCCceeeCcC
Q psy14531 207 G--TWSLDIPHCTNYTD 221 (222)
Q Consensus 207 G--~W~~~~p~C~~~~~ 221 (222)
| .|+.++|.|+...+
T Consensus 152 G~~~WS~p~p~C~~~~~ 168 (217)
T 2b5i_D 152 GKTRWTQPQLICTGEME 168 (217)
T ss_dssp SCEEECCCCEEEEC---
T ss_pred CccccCCCCcceEeccc
Confidence 6 89999999998764
No 63
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=1.8e-16 Score=103.97 Aligned_cols=68 Identities=25% Similarity=0.408 Sum_probs=63.6
Q ss_pred ccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531 12 QWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA 81 (222)
Q Consensus 12 ~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~ 81 (222)
.|+...|.|+.+.|+.|.. +||.+. ...|.+|++|+|+|+.||.|.|+..++|+.+|+|+.+.|.|+.
T Consensus 1 Gws~~~p~C~~~~C~~p~~p~nG~~~--~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~ 69 (73)
T 2ehf_A 1 GSSGSSGEIEKGGCGDPGIPAYGKRT--GSSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKPSCSG 69 (73)
T ss_dssp CCCCCCCCCCCCCSCCCCCCSSSEEE--CSCCCTTCEEEEECCSSCCBCSCSEEEBCSSSSBSSCCCCBCC
T ss_pred CCCCCCCeEeeeECcCCCCCCCCEEe--CCcccCCCEEEEEcCCCCEEeCCCeEEECCCCeECCCCCeEec
Confidence 3999999999999999988 999987 3678999999999999999999999999999999999999987
No 64
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2.5e-16 Score=103.24 Aligned_cols=71 Identities=30% Similarity=0.626 Sum_probs=65.8
Q ss_pred eeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCC
Q psy14531 72 WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPP 151 (222)
Q Consensus 72 W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p 151 (222)
|+...|.|+. +.|+.|..+.||.+. ...|.+|++|+|+|+.||.|.|+..++|+++|+|+...|
T Consensus 2 ws~~~p~C~~------------~~C~~p~~p~nG~~~----~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~Ws~~~P 65 (73)
T 2ehf_A 2 SSGSSGEIEK------------GGCGDPGIPAYGKRT----GSSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKP 65 (73)
T ss_dssp CCCCCCCCCC------------CCSCCCCCCSSSEEE----CSCCCTTCEEEEECCSSCCBCSCSEEEBCSSSSBSSCCC
T ss_pred CCCCCCeEee------------eECcCCCCCCCCEEe----CCcccCCCEEEEEcCCCCEEeCCCeEEECCCCeECCCCC
Confidence 9999999999 899999999999886 367889999999999999999999999999999999999
Q ss_pred ceeecCC
Q psy14531 152 RCKARCE 158 (222)
Q Consensus 152 ~C~~~C~ 158 (222)
.|+..|+
T Consensus 66 ~C~~~cg 72 (73)
T 2ehf_A 66 SCSGPSS 72 (73)
T ss_dssp CBCCCCC
T ss_pred eEecccC
Confidence 9997775
No 65
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.65 E-value=1e-15 Score=131.36 Aligned_cols=126 Identities=26% Similarity=0.500 Sum_probs=97.1
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc-C-----CCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCe
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL-G-----EETIVCTETGRWSRAPPRCK-ARCEYPGEPQNG 166 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~-g-----~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g 166 (222)
+.|+.|+.+.|+.+.. .....|.+|++|+|+|+.||.|. | ...++|+.||+|+...|.|+ +.|+.|+.+.||
T Consensus 1 i~C~~p~~~~n~~~~~-~~~~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~~p~C~~~~C~~p~~~~nG 79 (399)
T 1gpz_A 1 IKCPQPKTLDEFTIIQ-NLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNG 79 (399)
T ss_dssp CCBCCCCCSSTTEEEE-SCCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEECBCCSCCCCTTE
T ss_pred CCCcCCCCCCCCCCcC-CCCCceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCcCCceeeeeCCCCCCCCCc
Confidence 3699999999955543 23678999999999999999986 4 34567999999999999998 899999999999
Q ss_pred EEec--CccccCCCCeEEEEcCCCCe-eccCCC----CCCcceeCCCCcccCC-----CCceeeCc
Q psy14531 167 KIIP--LKFFYDPGDHIQVTCNDGYV-KPLDIT----PTSGPYCQSDGTWSLD-----IPHCTNYT 220 (222)
Q Consensus 167 ~~~~--~~~~~~~g~~v~y~C~~gy~-~~~~~~----~~~~~~C~~~G~W~~~-----~p~C~~~~ 220 (222)
.+.. ....+..++.++|.|++||. +.+..+ ....++|..+|.|... +|.|.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~v~y~C~~gy~~l~~~~~~~~~~~g~~~C~~~g~w~~~~~~~~~p~C~~~C 145 (399)
T 1gpz_A 80 DFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVC 145 (399)
T ss_dssp EEEESSSTTCCBTTCEEEEEECTTTEEEEC-------CCCEEEECTTSSEEESSSCSSCCEEEECC
T ss_pred ceEeecCCCCceeeEEEEEecCCchhccccccCcccccCceEEECCCceEeccccccccCCccCCC
Confidence 7653 23445669999999999994 322100 0156899999999864 68887653
No 66
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*
Probab=99.63 E-value=7.7e-16 Score=119.38 Aligned_cols=124 Identities=19% Similarity=0.290 Sum_probs=89.4
Q ss_pred C-CCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeC--CCceEeCCCC---eeeCCCCceeccceeee----ecc---
Q psy14531 25 C-PKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKG--PPDIVCQKNG---SWSGAIPECNAFFFFFF----FFF--- 90 (222)
Q Consensus 25 C-~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G--~~~~~C~~~g---~W~~~~p~C~~~~~~~~----~~~--- 90 (222)
| .+|+. +|+.+. ...|..|+.|.|.|+.||.+.+ +..++|+.++ +|+. .+.|......+. +..
T Consensus 3 C~g~PP~l~nA~~~--~~~Y~~Gt~V~Y~C~~Gf~r~~~~s~~i~C~~~~~~~~Wt~-~~fC~~~~~~~~~~~v~p~~~e 79 (217)
T 2b5i_D 3 CDDDPPEIPHATFK--AMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDN-QCQCTSSATRQTTKQVTPQPEE 79 (217)
T ss_dssp CCSCCCCCTTEEEE--CSSBCTTCEEECCCCTTEEECTTCCSEEEBC-----CCBSC-CCCEEEC---------------
T ss_pred CCCCCCCCcccccc--CccCCCCCEEEEECCCCceeCCCCCceEEecCCCCcccccC-CceeecccccCcccccccCchh
Confidence 7 45555 888775 3679999999999999998764 6799998665 5986 677865211000 000
Q ss_pred --------c-----------ccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC--EEcCCCeEEeCc-CC--ee
Q psy14531 91 --------F-----------NPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH--HLLGEETIVCTE-TG--RW 146 (222)
Q Consensus 91 --------~-----------~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy--~~~g~~~~~C~~-~g--~W 146 (222)
. -...|..|+.+.|+.+. ....|.+|++|+|.|+.|| .+.|+..++|.. +| .|
T Consensus 80 ~~~~k~t~~q~~~~~~~~~n~~~~C~~PP~i~n~~l~---~~~~y~~Gs~V~Y~C~eGY~~ll~G~~~~~C~~~~G~~~W 156 (217)
T 2b5i_D 80 QKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATE---RIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRW 156 (217)
T ss_dssp -----------------------CBCCCCCCSSCCSS---CCEECCTTCEEEEEECTTCEEEESSCSEEEEEECSSCEEE
T ss_pred hccccccccccccCccccccccccCCCCCcccccccc---ccccccCCCEEEEECcCCchhcccCCcceEeecCCCcccc
Confidence 0 00169988888898653 3577999999999999999 468999999974 46 89
Q ss_pred eCCCCcee
Q psy14531 147 SRAPPRCK 154 (222)
Q Consensus 147 s~~~p~C~ 154 (222)
+.+.|.|+
T Consensus 157 S~p~p~C~ 164 (217)
T 2b5i_D 157 TQPQLICT 164 (217)
T ss_dssp CCCCEEEE
T ss_pred CCCCcceE
Confidence 99889998
No 67
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.4e-15 Score=99.90 Aligned_cols=69 Identities=23% Similarity=0.434 Sum_probs=62.0
Q ss_pred eEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531 20 CQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV 98 (222)
Q Consensus 20 C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~ 98 (222)
+..+.|+.|+. +||.+......|.+|++|+|+|+.||.|.|+..++|+.+|+|+.+.|.|+. +.|+.
T Consensus 3 s~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~------------v~C~~ 70 (74)
T 2yra_A 3 SGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEK------------TEESG 70 (74)
T ss_dssp CCCCCCCCCCCCTTEEECCSSSSCCTTCEEEEEECTTEEEESCSEEEBCTTSCBSSCCCEEEE------------CSCCS
T ss_pred ccCCcCcCCCCCCCeEEeccCCCccCCCEEEEECCCCCEECCCCceEECCCCEECCCCCEEee------------cCCcC
Confidence 45678999887 999988665678999999999999999999999999999999999999999 89987
Q ss_pred CC
Q psy14531 99 PA 100 (222)
Q Consensus 99 p~ 100 (222)
|+
T Consensus 71 P~ 72 (74)
T 2yra_A 71 PS 72 (74)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 68
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=4.1e-14 Score=92.80 Aligned_cols=67 Identities=22% Similarity=0.442 Sum_probs=59.6
Q ss_pred cccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCC
Q psy14531 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPG 161 (222)
Q Consensus 93 ~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~ 161 (222)
.+.|+.|+.+.||.+.. ....|.+|++|+|+|+.||.|.|+..++|+++|+|+...|.|+ +.|..|.
T Consensus 5 ~~~C~~p~~~~nG~~~~--~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~v~C~~P~ 72 (74)
T 2yra_A 5 SSGCSDLPEIQNGWKTT--SHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEKTEESGPS 72 (74)
T ss_dssp CCCCCCCCCCTTEEECC--SSSSCCTTCEEEEEECTTEEEESCSEEEBCTTSCBSSCCCEEEECSCCSSS
T ss_pred CCcCcCCCCCCCeEEec--cCCCccCCCEEEEECCCCCEECCCCceEECCCCEECCCCCEEeecCCcCCC
Confidence 37899999999998763 2456899999999999999999999999999999999899999 7898775
No 69
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=99.49 E-value=1.3e-13 Score=93.01 Aligned_cols=69 Identities=22% Similarity=0.483 Sum_probs=60.8
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC-CEEcCC-CeEEeCcCCeee-----CCCCceeecCCCCCC
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR-HHLLGE-ETIVCTETGRWS-----RAPPRCKARCEYPGE 162 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g-y~~~g~-~~~~C~~~g~Ws-----~~~p~C~~~C~~p~~ 162 (222)
+.|+.|+.+.||.+........|.+|++|+|+|+.| |.|.|. ..++|+++|+|+ ...|.|+..|+.|..
T Consensus 6 v~C~~P~~~~nG~~~~~~~~~~~~~gs~v~y~C~~g~y~l~g~~~~~~C~~~G~Ws~~~~~~~~P~C~~vCg~P~~ 81 (86)
T 3tvj_A 6 VDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKGEKSLPVCEPVCGLSAR 81 (86)
T ss_dssp CBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECSSCCEEEECTTSSEEETTSCCSCCCEEECCCCCCC
T ss_pred eeCCCCCCCCCeEEEeccCCCcccCCCEEEEEcCCCceeccCCCCEEEECCCCCCCcCCCCCCCCeeECcCCCCCc
Confidence 899999999999987543456789999999999995 788998 899999999999 579999988999865
No 70
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=99.45 E-value=1.8e-13 Score=92.32 Aligned_cols=70 Identities=21% Similarity=0.476 Sum_probs=60.0
Q ss_pred eeEEeeCCCCcc-CCCeEEec--cCCcccccEEEEEcCCC-CeEeCC-CceEeCCCCeee-----CCCCceeccceeeee
Q psy14531 19 TCQQIICPKIVV-ENPYLTLV--EQNNTYRGHAIFQCSWG-YQLKGP-PDIVCQKNGSWS-----GAIPECNAFFFFFFF 88 (222)
Q Consensus 19 ~C~~~~C~~p~~-~ng~~~~~--~~~~~~g~~~~~~C~~g-y~l~G~-~~~~C~~~g~W~-----~~~p~C~~~~~~~~~ 88 (222)
.|+.+.|+.|+. +||.+... ...|.+|+.|+|+|+.| |.|.|. ..++|+++|+|+ .++|.|++
T Consensus 2 ~C~~v~C~~P~~~~nG~~~~~~~~~~~~~gs~v~y~C~~g~y~l~g~~~~~~C~~~G~Ws~~~~~~~~P~C~~------- 74 (86)
T 3tvj_A 2 SMTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKGEKSLPVCEP------- 74 (86)
T ss_dssp --CCCBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECSSCCEEEECTTSSEEETTSCCSCCCEEE-------
T ss_pred eeeeeeCCCCCCCCCeEEEeccCCCcccCCCEEEEEcCCCceeccCCCCEEEECCCCCCCcCCCCCCCCeeEC-------
Confidence 588999999987 99998854 35689999999999996 778998 899999999999 68999999
Q ss_pred cccccccCCCCCC
Q psy14531 89 FFFNPVHCPVPAL 101 (222)
Q Consensus 89 ~~~~~~~C~~p~~ 101 (222)
+ |..|..
T Consensus 75 -----v-Cg~P~~ 81 (86)
T 3tvj_A 75 -----V-CGLSAR 81 (86)
T ss_dssp -----C-CCCCCC
T ss_pred -----c-CCCCCc
Confidence 6 998775
No 71
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=99.45 E-value=7e-14 Score=90.16 Aligned_cols=64 Identities=22% Similarity=0.403 Sum_probs=54.7
Q ss_pred CceeecC-CCCCCCCCeEEecC--ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531 151 PRCKARC-EYPGEPQNGKIIPL--KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY 219 (222)
Q Consensus 151 p~C~~~C-~~p~~~~~g~~~~~--~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~ 219 (222)
+.|...| ..++.+.||.+... ...|..|+.|+|.|++||.+.|+ ..++|+ +|+|++++|.|..+
T Consensus 2 ~~C~~~Cp~~~~~~~nG~~~~~~~~~~y~~g~~v~f~C~~Gy~L~G~----~~~~C~-~g~Ws~~~P~C~~i 68 (68)
T 1srz_A 2 AEFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGS----SRSVCS-QGQWSTPKPHCQVN 68 (68)
T ss_dssp CCSSSSCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSC----CEEEEE-TTEESSCCCCEEEC
T ss_pred CcceeECCCCCCCCCCCEEEecCCCCceeCCCEEEEECCCCCEEeCC----CcCEEC-CCEEeCCCCEeeEC
Confidence 5788889 45667899999853 33577899999999999999988 889998 99999999999875
No 72
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=99.42 E-value=2.3e-13 Score=87.67 Aligned_cols=60 Identities=30% Similarity=0.611 Sum_probs=51.2
Q ss_pred cCC-CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceee
Q psy14531 95 HCP-VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA 155 (222)
Q Consensus 95 ~C~-~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~ 155 (222)
.|+ +++.+.||.+........|.+|++|+|+|+.||.|.|+..++|+ +|+|++..|.|+.
T Consensus 7 ~Cp~~~~~~~nG~~~~~~~~~~y~~g~~v~f~C~~Gy~L~G~~~~~C~-~g~Ws~~~P~C~~ 67 (68)
T 1srz_A 7 ICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTPKPHCQV 67 (68)
T ss_dssp SCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSCCEEEEE-TTEESSCCCCEEE
T ss_pred ECCCCCCCCCCCEEEecCCCCceeCCCEEEEECCCCCEEeCCCcCEEC-CCEEeCCCCEeeE
Confidence 894 56778899987432344588999999999999999999999999 9999998999973
No 73
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=99.11 E-value=5.1e-11 Score=100.78 Aligned_cols=78 Identities=18% Similarity=0.433 Sum_probs=58.3
Q ss_pred eeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCC------ceEeCCCCeeeCCCCceeccceeeeeccc
Q psy14531 19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP------DIVCQKNGSWSGAIPECNAFFFFFFFFFF 91 (222)
Q Consensus 19 ~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~------~~~C~~~g~W~~~~p~C~~~~~~~~~~~~ 91 (222)
.+....|+.|.. .||.+......+.+|+.|+|+|++||+|.|.. .++|+.+|+|+.+.|.|++
T Consensus 276 ~~~~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~~P~C~~---------- 345 (361)
T 4aqb_A 276 RAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKK---------- 345 (361)
T ss_dssp EEECCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEE----------
T ss_pred EEccCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCCCCeeeE----------
Confidence 577778999888 99999877778899999999999999998875 4789999999999999999
Q ss_pred ccccCCCCCCCCCceEE
Q psy14531 92 NPVHCPVPALPLNGHLI 108 (222)
Q Consensus 92 ~~~~C~~p~~~~~g~~~ 108 (222)
+.|+.|..+.||.+.
T Consensus 346 --~~Cg~p~~~~ng~vt 360 (361)
T 4aqb_A 346 --NEIDLESELKSEQVT 360 (361)
T ss_dssp --CC-------------
T ss_pred --EeCCCCCCCCCCccc
Confidence 899999999999764
No 74
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=99.08 E-value=6.2e-10 Score=94.11 Aligned_cols=80 Identities=20% Similarity=0.458 Sum_probs=57.6
Q ss_pred ecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCC------eEEeCcCCeeeCCCCcee-ecCCCC
Q psy14531 88 FFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRWSRAPPRCK-ARCEYP 160 (222)
Q Consensus 88 ~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~------~~~C~~~g~Ws~~~p~C~-~~C~~p 160 (222)
.|......|+.|..+.||.+.. ....|.+|+.|+|+|+.||.|.|+. .++|+.+|+|+.+.|.|+ +.|+.|
T Consensus 274 ~y~~~~~~C~~~~~p~~G~~~~--~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~~P~C~~~~Cg~p 351 (361)
T 4aqb_A 274 SYRAAGNECPELQPPVHGKIEP--SQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKKNEIDLE 351 (361)
T ss_dssp EEEEECCEECCCCCCTTEEEES--CCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEECC----
T ss_pred EEEEccCCCCCCCCCCCCEEec--CCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCCCCeeeEEeCCCC
Confidence 4556667899999999998863 3567889999999999999999865 478999999999999999 899999
Q ss_pred CCCCCeEEe
Q psy14531 161 GEPQNGKII 169 (222)
Q Consensus 161 ~~~~~g~~~ 169 (222)
..+.||.+.
T Consensus 352 ~~~~ng~vt 360 (361)
T 4aqb_A 352 SELKSEQVT 360 (361)
T ss_dssp ---------
T ss_pred CCCCCCccc
Confidence 999998763
No 75
>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1
Probab=98.47 E-value=2.2e-07 Score=59.84 Aligned_cols=59 Identities=19% Similarity=0.425 Sum_probs=48.8
Q ss_pred ccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCC-----eeeCCCCcee
Q psy14531 92 NPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETG-----RWSRAPPRCK 154 (222)
Q Consensus 92 ~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g-----~Ws~~~p~C~ 154 (222)
..+.|+.|+..+|+.+ ....|.++++++|.|.+||.-. +...+.|..|| .|+.+...|.
T Consensus 7 ~~~~C~~Pp~ve~a~~----r~~~y~v~s~vRYqC~~Gf~rr~g~s~lirC~~n~~~~~~~Wt~P~L~CI 72 (78)
T 2psm_F 7 GGTTCPPPVSIEHADI----RVKNYSVNSRERYVCNSGFKRKAGTSTLIECVINKNTNVAHWTTPSLKCI 72 (78)
T ss_dssp ---CCCCCCCCTTEEC----CCSCCSTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEE
T ss_pred CCCcCCCCCccccccc----ceeeeccCCEEEEecchhHHhhCCCCCceEEEcCCCcCcceecCCCeEEe
Confidence 3589999999999976 3688999999999999999755 46889999876 6998888886
No 76
>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1
Probab=98.47 E-value=1.9e-07 Score=60.16 Aligned_cols=62 Identities=18% Similarity=0.338 Sum_probs=50.6
Q ss_pred ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC-----cccCCCCceeeCc
Q psy14531 155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG-----TWSLDIPHCTNYT 220 (222)
Q Consensus 155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G-----~W~~~~p~C~~~~ 220 (222)
..|+.|+.+.|..+ ....|..++.++|.|++||..... ++ ..++|+.|| .|+.+...|++..
T Consensus 9 ~~C~~Pp~ve~a~~--r~~~y~v~s~vRYqC~~Gf~rr~g-~s-~lirC~~n~~~~~~~Wt~P~L~CI~ep 75 (78)
T 2psm_F 9 TTCPPPVSIEHADI--RVKNYSVNSRERYVCNSGFKRKAG-TS-TLIECVINKNTNVAHWTTPSLKCIRDP 75 (78)
T ss_dssp -CCCCCCCCTTEEC--CCSCCSTTCEEECEECTTEEECTT-CC-CEEEEEEETTTTEEEECCCCCCEEECT
T ss_pred CcCCCCCccccccc--ceeeeccCCEEEEecchhHHhhCC-CC-CceEEEcCCCcCcceecCCCeEEecCC
Confidence 57999999999877 667899999999999999976532 22 789999876 6999999998754
No 77
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=98.09 E-value=7.7e-06 Score=68.11 Aligned_cols=67 Identities=22% Similarity=0.603 Sum_probs=54.0
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC-EEcCC--CeEEeCcCCeeeC-----CCCceeecCCCCCCC
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH-HLLGE--ETIVCTETGRWSR-----APPRCKARCEYPGEP 163 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy-~~~g~--~~~~C~~~g~Ws~-----~~p~C~~~C~~p~~~ 163 (222)
+.|+.|+.+.||.+. ......+++.++|+|+.+| .+.+. ..++|.++|.|.. ..|.|...|+.+..+
T Consensus 2 v~C~~p~~~~~g~~~---~~~~~~~~s~~~~~C~~~yy~~~~~~~~~~~C~~~g~w~~~~~~~~~~~c~~~CG~~~~~ 76 (333)
T 1elv_A 2 LDCGIPESIENGKVE---DPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPKCVPVCGVPREP 76 (333)
T ss_dssp CBCCSCCCCTTEEEC---CCSCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTSCCCEEECCSCCSSC
T ss_pred CCCCCCCcccCCcee---cCCCCccceeEEEECCCCeEeeecCCCceEEECCCCeEcccccccccccccCCcCCCCCc
Confidence 689999999999875 2345677999999999996 55554 7899999999986 678999999987543
No 78
>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A
Probab=98.03 E-value=2.4e-06 Score=57.65 Aligned_cols=61 Identities=20% Similarity=0.345 Sum_probs=49.4
Q ss_pred ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCC-----CcccCCCCceeeC
Q psy14531 155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSD-----GTWSLDIPHCTNY 219 (222)
Q Consensus 155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~-----G~W~~~~p~C~~~ 219 (222)
+.|+.|+.+.|..+ ....|..|+.++|.|+.||..... ++ ..++|..+ .+|+.+...|+..
T Consensus 6 ~~C~~Pp~~EHad~--rv~~y~v~s~vRYqC~~Gykrkag-ts-ali~Ck~~~~~g~~~WT~P~LkCI~d 71 (107)
T 2z3q_B 6 ITCPPPMSVEHADI--WVKSYSLYSRERYICNSGFKRKAG-TS-SLTECVLNKATNVAHWTTPSLKCIRD 71 (107)
T ss_dssp CBCCCCCCCTTEEC--CCSCCBTTCEEECEECTTEEECTT-CC-CEEEEEEETTTTEEEECCCCCCEEEC
T ss_pred ccCCCCCCcccccc--eeEEeccCCEEEEecchhhhhhcC-CC-CccEEEecccCCcceecCCCeEEecC
Confidence 57999999999888 457889999999999999976432 23 78999844 6799999999854
No 79
>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A
Probab=98.01 E-value=7.7e-06 Score=55.21 Aligned_cols=58 Identities=16% Similarity=0.402 Sum_probs=49.1
Q ss_pred cccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcC-----CeeeCCCCcee
Q psy14531 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTET-----GRWSRAPPRCK 154 (222)
Q Consensus 93 ~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~-----g~Ws~~~p~C~ 154 (222)
.+.|+.|+..+|..+. ...|..|++++|.|+.||+-. ++..+.|..+ ..|+.+...|+
T Consensus 5 ~~~C~~Pp~~EHad~r----v~~y~v~s~vRYqC~~Gykrkagtsali~Ck~~~~~g~~~WT~P~LkCI 69 (107)
T 2z3q_B 5 SITCPPPMSVEHADIW----VKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPSLKCI 69 (107)
T ss_dssp CCBCCCCCCCTTEECC----CSCCBTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEE
T ss_pred CccCCCCCCcccccce----eEEeccCCEEEEecchhhhhhcCCCCccEEEecccCCcceecCCCeEEe
Confidence 4789999999998873 688999999999999999654 4578899744 58999899998
No 80
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=97.79 E-value=3.5e-05 Score=64.07 Aligned_cols=58 Identities=21% Similarity=0.456 Sum_probs=47.0
Q ss_pred eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCe-EeCC--CceEeCCCCeeeC-----CCCceec
Q psy14531 23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQ-LKGP--PDIVCQKNGSWSG-----AIPECNA 81 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~-l~G~--~~~~C~~~g~W~~-----~~p~C~~ 81 (222)
+.|..|+. +||.+.. .....+++.++|+|+.+|+ |.+. ..++|..+|.|.. ..|.|.+
T Consensus 2 v~C~~p~~~~~g~~~~-~~~~~~~s~~~~~C~~~yy~~~~~~~~~~~C~~~g~w~~~~~~~~~~~c~~ 68 (333)
T 1elv_A 2 LDCGIPESIENGKVED-PESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPKCVP 68 (333)
T ss_dssp CBCCSCCCCTTEEECC-CSCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTSCCCEEE
T ss_pred CCCCCCCcccCCceec-CCCCccceeEEEECCCCeEeeecCCCceEEECCCCeEcccccccccccccC
Confidence 57999888 9999873 3467889999999999964 5554 6899999999986 6789987
No 81
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=97.58 E-value=0.00013 Score=61.04 Aligned_cols=59 Identities=24% Similarity=0.589 Sum_probs=47.0
Q ss_pred ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCCeeeCC-----CCceeecCCCCCCC
Q psy14531 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETGRWSRA-----PPRCKARCEYPGEP 163 (222)
Q Consensus 94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g~Ws~~-----~p~C~~~C~~p~~~ 163 (222)
..|+.|+..+||.+. ..++|.|+..|.+. ++..++|.++|+|++. .|.|++.|+.|..+
T Consensus 31 ~~c~~p~~~~~g~~~-----------~~i~y~C~~~y~~~~~~~~~~~c~~~g~w~~~~~~~~lp~C~p~CG~p~~~ 96 (347)
T 4f4o_C 31 DSCPKPPEIPKGYVE-----------HMVRYHCQTYYKLRTAGDGVYTLDSNKQWTNKVTGEKLPECEAVCGKPKNP 96 (347)
T ss_dssp --CCCCCCBTTEEEE-----------EEEEEEECTTEEEECSSCSEEEECTTSCEEBTTTBTCCCEEEECCSCCSSC
T ss_pred CcCCCCCCCCCceec-----------eeeEEcCCCccEeccCCCCCEEECCCCCEeCCCCCccCCCccCCCCCCCCC
Confidence 468888888899864 24799999999875 6678999999999863 48999999988654
No 82
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=97.27 E-value=0.00045 Score=57.84 Aligned_cols=58 Identities=29% Similarity=0.605 Sum_probs=45.2
Q ss_pred eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEe--CCCceEeCCCCeeeCC-----CCceeccceeeeecccccc
Q psy14531 23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLK--GPPDIVCQKNGSWSGA-----IPECNAFFFFFFFFFFNPV 94 (222)
Q Consensus 23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~--G~~~~~C~~~g~W~~~-----~p~C~~~~~~~~~~~~~~~ 94 (222)
..|+.|+. +||++.. .++|+|++.|+|. |+...+|.++|+|+.. .|.|++
T Consensus 31 ~~c~~p~~~~~g~~~~---------~i~y~C~~~y~~~~~~~~~~~c~~~g~w~~~~~~~~lp~C~p------------- 88 (347)
T 4f4o_C 31 DSCPKPPEIPKGYVEH---------MVRYHCQTYYKLRTAGDGVYTLDSNKQWTNKVTGEKLPECEA------------- 88 (347)
T ss_dssp --CCCCCCBTTEEEEE---------EEEEEECTTEEEECSSCSEEEECTTSCEEBTTTBTCCCEEEE-------------
T ss_pred CcCCCCCCCCCceece---------eeEEcCCCccEeccCCCCCEEECCCCCEeCCCCCccCCCccC-------------
Confidence 46888887 9998752 4899999999884 6678999999999854 589998
Q ss_pred cCCCCCCC
Q psy14531 95 HCPVPALP 102 (222)
Q Consensus 95 ~C~~p~~~ 102 (222)
.|..|..+
T Consensus 89 ~CG~p~~~ 96 (347)
T 4f4o_C 89 VCGKPKNP 96 (347)
T ss_dssp CCSCCSSC
T ss_pred CCCCCCCC
Confidence 69876554
No 83
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=97.19 E-value=0.0017 Score=53.83 Aligned_cols=67 Identities=27% Similarity=0.495 Sum_probs=53.0
Q ss_pred cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC-EEcCC--------CeEEeCcCCeeeCC-----CCceeecCCCC
Q psy14531 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH-HLLGE--------ETIVCTETGRWSRA-----PPRCKARCEYP 160 (222)
Q Consensus 95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy-~~~g~--------~~~~C~~~g~Ws~~-----~p~C~~~C~~p 160 (222)
.|..|..+.||.+..........++++++|.|...| .+.+. ..++|..+|.|... .|.|...|+.+
T Consensus 1 ~c~~p~~~~~g~~~~~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~w~~~~~~~~~~~c~~~CG~~ 80 (329)
T 1md8_A 1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKP 80 (329)
T ss_dssp CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCCEEECCSCC
T ss_pred CCCCCCCcCCCceeeecCCCCcccceEEEeecCCcceEeeccCCccccCCCceEECCCccccCccCccccCCCCCCCCCC
Confidence 388899999998775544566788999999999976 45543 57899999999753 57899899986
Q ss_pred C
Q psy14531 161 G 161 (222)
Q Consensus 161 ~ 161 (222)
.
T Consensus 81 ~ 81 (329)
T 1md8_A 81 V 81 (329)
T ss_dssp S
T ss_pred C
Confidence 4
No 84
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=96.08 E-value=0.017 Score=47.74 Aligned_cols=58 Identities=22% Similarity=0.465 Sum_probs=44.7
Q ss_pred eCCCCcc-CCCeEEecc--CCcccccEEEEEcCCCC-eEeCC--------CceEeCCCCeeeCC-----CCceec
Q psy14531 24 ICPKIVV-ENPYLTLVE--QNNTYRGHAIFQCSWGY-QLKGP--------PDIVCQKNGSWSGA-----IPECNA 81 (222)
Q Consensus 24 ~C~~p~~-~ng~~~~~~--~~~~~g~~~~~~C~~gy-~l~G~--------~~~~C~~~g~W~~~-----~p~C~~ 81 (222)
.|..|.. +||.+.... ..+.+++.+.|+|+..| .|.+. ...+|..+|.|... .|.|..
T Consensus 1 ~c~~p~~~~~g~~~~~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~w~~~~~~~~~~~c~~ 75 (329)
T 1md8_A 1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLP 75 (329)
T ss_dssp CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCCEEE
T ss_pred CCCCCCCcCCCceeeecCCCCcccceEEEeecCCcceEeeccCCccccCCCceEECCCccccCccCccccCCCCC
Confidence 3888887 999887543 45788999999999876 46543 57899999999753 578887
No 85
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=76.85 E-value=1.2 Score=29.63 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=23.8
Q ss_pred CCCCEEEEEcCCCCE-----EcCCCeEEeCcCCeeeC
Q psy14531 117 RVGAILQFACNDRHH-----LLGEETIVCTETGRWSR 148 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~-----~~g~~~~~C~~~g~Ws~ 148 (222)
..|+++...|..-+. ..|...+.|..||+|..
T Consensus 45 ~~G~~v~~~CP~~~~~~~~~~~~~a~R~C~~~G~W~~ 81 (96)
T 4ers_A 45 PANTTANISCPWYLPWHHKVQHRFVFKRCGPDGQWVR 81 (96)
T ss_dssp ETTEEEEEECCTTSTTTTTSTTCEEEEEECTTSCBCB
T ss_pred CCCCEEECCCChhhCcCccCCccceeeecCCCCeEeC
Confidence 558888899986432 12557899999999965
No 86
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=74.78 E-value=0.52 Score=30.69 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=22.6
Q ss_pred CCCCEEEEEcCCCCEE-----cCCCeEEeCcCCeeeC
Q psy14531 117 RVGAILQFACNDRHHL-----LGEETIVCTETGRWSR 148 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~~-----~g~~~~~C~~~g~Ws~ 148 (222)
..|+++...|..-|.. .+...+.|.++|+|+.
T Consensus 35 ~~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~ 71 (84)
T 2l27_A 35 PAGQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAA 71 (84)
T ss_dssp BSSBCCBCCCCSSBTTBCCCCSSCCBCCEETTTEECS
T ss_pred CCCCEEEecCchhhcCcccCcCCceecCCCCCCcCCC
Confidence 4466666777774422 3557899999999975
No 87
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=74.71 E-value=1.6 Score=30.11 Aligned_cols=32 Identities=25% Similarity=0.457 Sum_probs=23.7
Q ss_pred CCCCEEEEEcCCCCEE---cCCCeEEeCcCCeeeC
Q psy14531 117 RVGAILQFACNDRHHL---LGEETIVCTETGRWSR 148 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~~---~g~~~~~C~~~g~Ws~ 148 (222)
..|++|...|..-|.. .|...+.|..+|+|+.
T Consensus 61 ~~G~~v~~~CP~~~~~f~~~g~v~R~C~~~G~W~~ 95 (115)
T 3n7s_A 61 AAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFR 95 (115)
T ss_dssp ETTCEEEEECCSSSTTCCTTSEEEEEBCTTSCBCB
T ss_pred CCCCEEEecCchhhcCCCCCCcEEeecCCCCCccc
Confidence 5578888888765432 3557789999999974
No 88
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=72.08 E-value=2.2 Score=30.32 Aligned_cols=43 Identities=21% Similarity=0.311 Sum_probs=29.7
Q ss_pred cCCCCEEEEEcCCCCEE-----cCCCeEEeCcCCeeeCCCCceeecCCCC
Q psy14531 116 YRVGAILQFACNDRHHL-----LGEETIVCTETGRWSRAPPRCKARCEYP 160 (222)
Q Consensus 116 ~~~g~~~~~~C~~gy~~-----~g~~~~~C~~~g~Ws~~~p~C~~~C~~p 160 (222)
-..|++|...|..-|.. .|...+.|.+||+|+. -+. ...|...
T Consensus 71 t~~G~~v~~~CP~~~~~~~~~~~g~vsR~C~~dG~W~~-~~n-ys~C~~~ 118 (135)
T 2qkh_A 71 AAPNATARASCPWYLPWHHHVAAGFVLRQCGSDGQWGL-WRD-HTQCENP 118 (135)
T ss_dssp BCTTEEEEEECCTTSTTHHHHTTCEEEEEECTTSCBCS-CCB-CGGGSCC
T ss_pred CCCCCEEEecCchhhcCcccCCCceEeccCCCCCCCCC-CCC-cccccCc
Confidence 36688999999987642 2556889999999973 121 2456654
No 89
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=69.36 E-value=2.5 Score=29.43 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=23.7
Q ss_pred CCCCEEEEEcCCCCEE-----cCCCeEEeCcCCeee
Q psy14531 117 RVGAILQFACNDRHHL-----LGEETIVCTETGRWS 147 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~~-----~g~~~~~C~~~g~Ws 147 (222)
..|++|...|..-+.. .|...+.|..+|+|.
T Consensus 53 ~~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~ 88 (122)
T 3c5t_A 53 EPGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWL 88 (122)
T ss_dssp CTTEEEEEECCTTSTTGGGCTTCEEEEEECTTSSBC
T ss_pred CCCcEEEeeCcchhhCccccccceEecCCCCCCccc
Confidence 5588888999886532 244689999999994
No 90
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A
Probab=65.45 E-value=1.5 Score=30.51 Aligned_cols=41 Identities=22% Similarity=0.446 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCCEE-----cCCCeEEeCcCCeeeCCCCceeecCCC
Q psy14531 117 RVGAILQFACNDRHHL-----LGEETIVCTETGRWSRAPPRCKARCEY 159 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~~-----~g~~~~~C~~~g~Ws~~~p~C~~~C~~ 159 (222)
..|++|...|..-|.. .|...+.|..||+|+...+ ...|..
T Consensus 61 ~~G~~v~~pCP~~~~~~~~~~~g~vsR~C~~nG~W~~~~n--ys~C~~ 106 (119)
T 1u34_A 61 APGALVERPCPEYFNGIKYNTTRNAYRECLENGTWASRVN--YSHCEP 106 (119)
T ss_dssp CTTCBCCCCSSCTTSSSCCCCCCCCCCBCCTTSCCCSCCC--CCSSSC
T ss_pred CCCCEEEecCccccCCcccCCCCeeecCCCCCCcCCCCCC--hhHhcC
Confidence 4566777777775532 3567889999999975333 244543
No 91
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=64.76 E-value=3.8 Score=28.19 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=21.3
Q ss_pred CCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccC
Q psy14531 177 PGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL 211 (222)
Q Consensus 177 ~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~ 211 (222)
.|+.|...|..-+..... .....+.|..+|+|..
T Consensus 62 ~G~~v~~~CP~~~~~f~~-~g~v~R~C~~~G~W~~ 95 (115)
T 3n7s_A 62 AGTESMQLCPDYFQDFDP-SEKVTKICDQDGNWFR 95 (115)
T ss_dssp TTCEEEEECCSSSTTCCT-TSEEEEEBCTTSCBCB
T ss_pred CCCEEEecCchhhcCCCC-CCcEEeecCCCCCccc
Confidence 478888888643321111 1116789999999973
No 92
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=61.87 E-value=4.3 Score=27.96 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCCEE----cCCCeEEeCcCCeeeCCC
Q psy14531 117 RVGAILQFACNDRHHL----LGEETIVCTETGRWSRAP 150 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~~----~g~~~~~C~~~g~Ws~~~ 150 (222)
..|+++...|..-|.. .|...+.|..+| |+...
T Consensus 64 ~~G~~v~~~CP~~~~~~~~~~g~v~R~C~~~G-Ws~~~ 100 (116)
T 2x57_A 64 NVGETVTVPCPKVFSNFYSKAGNISKNCTSDG-WSETF 100 (116)
T ss_dssp CTTCEEEEECCGGGGGGBSSCCEEEEEEETTE-ECCCB
T ss_pred CCCCEEEecCcccccCccCCCCeEEeeCCccc-CCCCC
Confidence 5588889999886632 355678999999 97643
No 93
>2xdg_A Growth hormone-releasing hormone receptor; signaling protein, membrane protein; 1.95A {Homo sapiens}
Probab=61.49 E-value=3 Score=27.46 Aligned_cols=32 Identities=31% Similarity=0.539 Sum_probs=23.1
Q ss_pred CCCCEEEEEcCCCCEE----cCCCeEEeCcCCeeeCC
Q psy14531 117 RVGAILQFACNDRHHL----LGEETIVCTETGRWSRA 149 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~~----~g~~~~~C~~~g~Ws~~ 149 (222)
..|+++...|..-|.. .|...+.|..+| |+..
T Consensus 38 ~~G~~v~~~CP~~~~~~~~~~~~v~R~C~~~G-W~~~ 73 (92)
T 2xdg_A 38 GSGEWVTLPCPDFFSHFSSESGAVKRDCTITG-WSEP 73 (92)
T ss_dssp CTTEEEEECCCGGGGGTCSSCCCEEEEEETTE-ECCC
T ss_pred CCCCEEEecCcchhccccccCCeEecCCCccc-CCCC
Confidence 4577788888876542 245678999999 8653
No 94
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1
Probab=60.33 E-value=5.6 Score=26.87 Aligned_cols=34 Identities=32% Similarity=0.742 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCCEEc------CCCeEEeCcCCeeeCCCC
Q psy14531 117 RVGAILQFACNDRHHLL------GEETIVCTETGRWSRAPP 151 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~~~------g~~~~~C~~~g~Ws~~~p 151 (222)
..|++|...|..-|... |...+.|.++| |+...|
T Consensus 52 ~~G~~v~~~CP~~~~~~~~~~~~g~v~R~C~~~G-Ws~~~~ 91 (106)
T 2jod_A 52 HVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEPFP 91 (106)
T ss_dssp BTTCCEEECCSCSSCCCSCCSCCSCEEECBCSSC-BCCCSS
T ss_pred CCCCEEEecCcchhcCCCCcCcCCeEEecCCccc-CCCCCC
Confidence 55778888888866432 34578999999 976433
No 95
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=58.73 E-value=14 Score=19.64 Aligned_cols=26 Identities=27% Similarity=0.659 Sum_probs=18.8
Q ss_pred EcCCCCeEeC-CCceEeCCCCeeeCCCCceec
Q psy14531 51 QCSWGYQLKG-PPDIVCQKNGSWSGAIPECNA 81 (222)
Q Consensus 51 ~C~~gy~l~G-~~~~~C~~~g~W~~~~p~C~~ 81 (222)
.|.+|..+.. =..-+|..+|.|. |+.
T Consensus 3 ~C~pG~~~~~dCNtC~C~~~G~W~-----CT~ 29 (36)
T 2xtt_A 3 ECEPGQTKKQDCNTCRCGSDGVWA-----CTR 29 (36)
T ss_dssp CSCTTCEEEETTEEEEECTTSCEE-----EEC
T ss_pred cCCCCCEEECCCCccCCCCCCEEe-----eeC
Confidence 3777777643 3567899899996 777
No 96
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=58.72 E-value=4.4 Score=26.92 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=22.3
Q ss_pred CCCCeEEEEcCCCCeeccCC-CCCCcceeCCCCcccC
Q psy14531 176 DPGDHIQVTCNDGYVKPLDI-TPTSGPYCQSDGTWSL 211 (222)
Q Consensus 176 ~~g~~v~y~C~~gy~~~~~~-~~~~~~~C~~~G~W~~ 211 (222)
.+|+.|...|..-+.....+ .....+.|..+|+|..
T Consensus 45 ~~G~~v~~~CP~~~~~~~~~~~~~a~R~C~~~G~W~~ 81 (96)
T 4ers_A 45 PANTTANISCPWYLPWHHKVQHRFVFKRCGPDGQWVR 81 (96)
T ss_dssp ETTEEEEEECCTTSTTTTTSTTCEEEEEECTTSCBCB
T ss_pred CCCCEEECCCChhhCcCccCCccceeeecCCCCeEeC
Confidence 34888889997433211110 0116799999999964
No 97
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A
Probab=55.29 E-value=5.3 Score=27.68 Aligned_cols=30 Identities=20% Similarity=0.519 Sum_probs=19.7
Q ss_pred CCeEEEEcCCCCee-----ccCCCCCCcceeCCCCcccC
Q psy14531 178 GDHIQVTCNDGYVK-----PLDITPTSGPYCQSDGTWSL 211 (222)
Q Consensus 178 g~~v~y~C~~gy~~-----~~~~~~~~~~~C~~~G~W~~ 211 (222)
|+.|...|..-+.. .+. ..+.|..+|+|+.
T Consensus 63 G~~v~~pCP~~~~~~~~~~~g~----vsR~C~~nG~W~~ 97 (119)
T 1u34_A 63 GALVERPCPEYFNGIKYNTTRN----AYRECLENGTWAS 97 (119)
T ss_dssp TCBCCCCSSCTTSSSCCCCCCC----CCCBCCTTSCCCS
T ss_pred CCEEEecCccccCCcccCCCCe----eecCCCCCCcCCC
Confidence 55566666544432 222 6899999999975
No 98
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=55.26 E-value=6.5 Score=27.85 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=22.7
Q ss_pred CCCCeEEEEcCCCCee-----ccCCCCCCcceeCCCCccc
Q psy14531 176 DPGDHIQVTCNDGYVK-----PLDITPTSGPYCQSDGTWS 210 (222)
Q Consensus 176 ~~g~~v~y~C~~gy~~-----~~~~~~~~~~~C~~~G~W~ 210 (222)
..|+.|...|.+-+.. .+. ..+.|..+|+|+
T Consensus 72 ~~G~~v~~~CP~~~~~~~~~~~g~----vsR~C~~dG~W~ 107 (135)
T 2qkh_A 72 APNATARASCPWYLPWHHHVAAGF----VLRQCGSDGQWG 107 (135)
T ss_dssp CTTEEEEEECCTTSTTHHHHTTCE----EEEEECTTSCBC
T ss_pred CCCCEEEecCchhhcCcccCCCce----EeccCCCCCCCC
Confidence 4588888999765532 222 679999999997
No 99
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1
Probab=52.77 E-value=9.2 Score=25.78 Aligned_cols=37 Identities=24% Similarity=0.457 Sum_probs=22.7
Q ss_pred CCCeEEEEcCCCCeeccCC--CCCCcceeCCCCcccCCCC
Q psy14531 177 PGDHIQVTCNDGYVKPLDI--TPTSGPYCQSDGTWSLDIP 214 (222)
Q Consensus 177 ~g~~v~y~C~~gy~~~~~~--~~~~~~~C~~~G~W~~~~p 214 (222)
.|+.|...|..-|...... .....+.|..+| |+...|
T Consensus 53 ~G~~v~~~CP~~~~~~~~~~~~g~v~R~C~~~G-Ws~~~~ 91 (106)
T 2jod_A 53 VGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEPFP 91 (106)
T ss_dssp TTCCEEECCSCSSCCCSCCSCCSCEEECBCSSC-BCCCSS
T ss_pred CCCEEEecCcchhcCCCCcCcCCeEEecCCccc-CCCCCC
Confidence 4778888887555321110 001578999999 986543
No 100
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=51.61 E-value=6 Score=27.26 Aligned_cols=38 Identities=26% Similarity=0.585 Sum_probs=23.4
Q ss_pred CCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCC
Q psy14531 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIP 214 (222)
Q Consensus 176 ~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p 214 (222)
..|+.|...|.+-+...........+.|..+| |+...|
T Consensus 64 ~~G~~v~~~CP~~~~~~~~~~g~v~R~C~~~G-Ws~~~p 101 (116)
T 2x57_A 64 NVGETVTVPCPKVFSNFYSKAGNISKNCTSDG-WSETFP 101 (116)
T ss_dssp CTTCEEEEECCGGGGGGBSSCCEEEEEEETTE-ECCCBS
T ss_pred CCCCEEEecCcccccCccCCCCeEEeeCCccc-CCCCCC
Confidence 34788888887555321100111679999999 986543
No 101
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=50.85 E-value=10 Score=26.24 Aligned_cols=35 Identities=20% Similarity=0.460 Sum_probs=21.7
Q ss_pred CCCCeEEEEcCCCCeeccC-CCCCCcceeCCCCccc
Q psy14531 176 DPGDHIQVTCNDGYVKPLD-ITPTSGPYCQSDGTWS 210 (222)
Q Consensus 176 ~~g~~v~y~C~~gy~~~~~-~~~~~~~~C~~~G~W~ 210 (222)
.+|+.|...|..-+.-... ......+.|..+|+|.
T Consensus 53 ~~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~ 88 (122)
T 3c5t_A 53 EPGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWL 88 (122)
T ss_dssp CTTEEEEEECCTTSTTGGGCTTCEEEEEECTTSSBC
T ss_pred CCCcEEEeeCcchhhCccccccceEecCCCCCCccc
Confidence 3478888888755432110 0111579999999993
No 102
>3n94_A Fusion protein of maltose-binding periplasmic Pro pituitary adenylate cyclase 1 receptor-short...; G-protein coupled receptor; HET: MAL; 1.80A {Escherichia coli} PDB: 3ehs_A* 3ehu_A* 3eht_A* 3n93_A* 3n95_A* 3n96_A*
Probab=38.51 E-value=11 Score=32.00 Aligned_cols=35 Identities=31% Similarity=0.700 Sum_probs=25.8
Q ss_pred cCCCCEEEEEcCCCCEEc------CCCeEEeCcCCeeeCCCC
Q psy14531 116 YRVGAILQFACNDRHHLL------GEETIVCTETGRWSRAPP 151 (222)
Q Consensus 116 ~~~g~~~~~~C~~gy~~~------g~~~~~C~~~g~Ws~~~p 151 (222)
-..|++|...|..-+... |...+.|+.+| |+...|
T Consensus 417 ~~~g~~~~~~cp~~~~~~~~~~~~~~~~r~c~~~g-w~~~~~ 457 (475)
T 3n94_A 417 AHVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEPFP 457 (475)
T ss_dssp BCTTCEEEEECCGGGGGTCTTGGGCEEEEEEETTE-ECCCBS
T ss_pred CCCCCeEecccchhhcCcCcCCCCCceeeecCccc-CCCCCC
Confidence 366999999998754322 45678999999 987544
No 103
>1wo9_A HI-1, trypsin inhibitor; hydrolase inhibitor; NMR {Synthetic} SCOP: g.4.1.1
Probab=24.84 E-value=64 Score=16.86 Aligned_cols=22 Identities=32% Similarity=0.625 Sum_probs=13.4
Q ss_pred cCCCCEEc-CCCeEEeCcCCeee
Q psy14531 126 CNDRHHLL-GEETIVCTETGRWS 147 (222)
Q Consensus 126 C~~gy~~~-g~~~~~C~~~g~Ws 147 (222)
|..|-.+. +=.+-+|..+|.|.
T Consensus 4 c~pG~ti~~dCNtCtC~~~g~W~ 26 (35)
T 1wo9_A 4 CTPGQTKKQDCNTCTCTPTGIWG 26 (35)
T ss_dssp CCTTCEEEETTEEEEECTTSCEE
T ss_pred CCCCCEEECCCCceECCCCCEEc
Confidence 44444443 22467887789995
No 104
>3h3g_A Fusion protein of maltose-binding periplasmic DOM human parathyroid hormone receptor...; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli} PDB: 3c4m_A* 3l2j_A*
Probab=24.62 E-value=39 Score=29.16 Aligned_cols=32 Identities=22% Similarity=0.459 Sum_probs=23.0
Q ss_pred CCCCEEEEEcCCCCEE---cCCCeEEeCcCCeeeC
Q psy14531 117 RVGAILQFACNDRHHL---LGEETIVCTETGRWSR 148 (222)
Q Consensus 117 ~~g~~~~~~C~~gy~~---~g~~~~~C~~~g~Ws~ 148 (222)
..|++|...|+.-+.. .|...+.|..+|+|..
T Consensus 468 ~~g~~~~~~Cp~~~~~~~~~~~~~r~C~~~g~w~~ 502 (539)
T 3h3g_A 468 APGEVVAVPCPDYIYDFNHKGHAYRRCDRNGSWEL 502 (539)
T ss_dssp CTTCEEEEECCTTCTTSCTTCEEEEEBCTTSCBCB
T ss_pred CCCCEEEeeCcchhccCCcCCceEeecCCCccccc
Confidence 4477788888764422 2556889999999965
No 105
>3n94_A Fusion protein of maltose-binding periplasmic Pro pituitary adenylate cyclase 1 receptor-short...; G-protein coupled receptor; HET: MAL; 1.80A {Escherichia coli} PDB: 3ehs_A* 3ehu_A* 3eht_A* 3n93_A* 3n95_A* 3n96_A*
Probab=24.33 E-value=24 Score=29.79 Aligned_cols=38 Identities=24% Similarity=0.448 Sum_probs=24.1
Q ss_pred CCCCeEEEEcCCCCeeccCC--CCCCcceeCCCCcccCCCC
Q psy14531 176 DPGDHIQVTCNDGYVKPLDI--TPTSGPYCQSDGTWSLDIP 214 (222)
Q Consensus 176 ~~g~~v~y~C~~gy~~~~~~--~~~~~~~C~~~G~W~~~~p 214 (222)
..|+.|...|..-+...... .....+.|..+| |+...|
T Consensus 418 ~~g~~~~~~cp~~~~~~~~~~~~~~~~r~c~~~g-w~~~~~ 457 (475)
T 3n94_A 418 HVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEPFP 457 (475)
T ss_dssp CTTCEEEEECCGGGGGTCTTGGGCEEEEEEETTE-ECCCBS
T ss_pred CCCCeEecccchhhcCcCcCCCCCceeeecCccc-CCCCCC
Confidence 45899999997543321110 001578999999 987544
No 106
>4dlo_A Brain-specific angiogenesis inhibitor 3; GAIN domain, includes GPS motif, autoproteolytic fold, extra signaling protein; HET: NAG FUL; 2.30A {Homo sapiens}
Probab=20.99 E-value=27 Score=29.11 Aligned_cols=62 Identities=23% Similarity=0.464 Sum_probs=34.6
Q ss_pred CeeEEeeCCCCcc--CCCeEE-eccCCcccccEEEEEcCCCCeEeCCCceEeCCC--C--eeeCC-CCceec
Q psy14531 18 PTCQQIICPKIVV--ENPYLT-LVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN--G--SWSGA-IPECNA 81 (222)
Q Consensus 18 p~C~~~~C~~p~~--~ng~~~-~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~--g--~W~~~-~p~C~~ 81 (222)
-.|...+|+.+.. +..... ..=.....|..+...|..|+. |...+.|..+ | .|..+ .-.|+.
T Consensus 6 ~~~~~~~c~~~~~~C~~~~~~~i~Wp~T~~G~~a~~~Cp~g~~--G~a~r~C~~~~~g~~~W~~p~~~~CtS 75 (382)
T 4dlo_A 6 RRCSEQRCPAPYEICPEDYLMSMVWKRTPAGDLAFNQCPLNAT--GTTSRRCSLSLHGVAFWEQPSFARCIS 75 (382)
T ss_dssp --------CCCCCEECCBCTTTSCBCCEETTCEEEECCCTTEE--EEEEEEEEECTTSCEEECCCEEEEEEE
T ss_pred cccccCCCCchhccCChhhcCceEECCCCCCCeEEccCcCCCc--eeEEEEeCCCCCCceecCCCCcccCCC
Confidence 4588888877643 222111 011335679999999999975 7788999853 4 79864 567874
Done!