RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14531
(222 letters)
>3o8e_B Membrane cofactor protein; short consensus repeat, complement
control protein, fiber KN virus-receptor interaction,
cell adhesion-immunity complex; HET: NAG; 2.84A {Homo
sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Length = 252
Score = 140 bits (355), Expect = 1e-41
Identities = 51/218 (23%), Positives = 74/218 (33%), Gaps = 28/218 (12%)
Query: 11 GQWSGE-VPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
W C + CP I N + F C+ GY L G + C+
Sbjct: 50 HTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCEL 109
Query: 69 NGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
GS WSG P C V C P NG + + ++
Sbjct: 110 KGSVAIWSGKPPICE------------KVLCTPPPKIKNGKHTFSE-VEVFEYLDAVTYS 156
Query: 126 CN-----DRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGD 179
C+ D L+GE TI C + WSRA P CK +C +P +I +
Sbjct: 157 CDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKA 216
Query: 180 HIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ C+ G+ + + C S+ TW +P C
Sbjct: 217 TVMFECDKGFY----LDGSDTIVCDSNSTWDPPVPKCL 250
Score = 105 bits (263), Expect = 7e-28
Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 48 AIFQCSWGYQLKGPPD--IVCQKNGSWSG-AIPECNAFFFFFFFFFFNPVHCPVPALPLN 104
++C GY P +C +N +W + C CP PLN
Sbjct: 26 VDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDAC------------YRETCPYIRDPLN 73
Query: 105 GHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPRCKAR-CEYP 160
G + P G Y G + F CN+ ++L+GEE + C G WS PP C+ C P
Sbjct: 74 GQAV--PANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPP 131
Query: 161 GEPQNGKIIPLKF-FYDPGDHIQVTCNDGY-VKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ +NGK + ++ D + +C+ P + S YC + WS P C
Sbjct: 132 PKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 190
Score = 104 bits (260), Expect = 1e-27
Identities = 39/154 (25%), Positives = 57/154 (37%), Gaps = 21/154 (13%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWG-----YQLKGP 61
S WSG+ P C++++C ++N T E A+ + C + L G
Sbjct: 112 SVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGE 171
Query: 62 PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAI 121
I C N WS A PEC V C P + + G + A
Sbjct: 172 STIYCGDNSVWSRAAPECK------------VVKCRFPVVENGKQI--SGFGKKFYYKAT 217
Query: 122 LQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA 155
+ F C+ +L G +TIVC W P+C
Sbjct: 218 VMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLK 251
Score = 41.8 bits (98), Expect = 6e-05
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 157 CEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS-LDIP 214
CE P + ++I K +Y+ G+ + C GY + C + TW +
Sbjct: 1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYF--YIPPLATHTICDRNHTWLPVSDD 58
Query: 215 HCT 217
C
Sbjct: 59 ACY 61
Score = 26.4 bits (58), Expect = 7.3
Identities = 5/15 (33%), Positives = 7/15 (46%)
Query: 9 SQGQWSGEVPTCQQI 23
S W VP C ++
Sbjct: 238 SNSTWDPPVPKCLKV 252
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat,
sushi, complement control protein, N glycosylation,
multi-domain, membrane adhesion; HET: NAG MAN; 2.70A
{Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Length = 319
Score = 141 bits (356), Expect = 5e-41
Identities = 53/209 (25%), Positives = 75/209 (35%), Gaps = 21/209 (10%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG 70
G W C +CP + Y F C+ G+ L G C + G
Sbjct: 51 GLWPINTLKCTPRVCPFAG-ILENGAVRYTTFEYPNTISFSCNTGFYLNGADSAKCTEEG 109
Query: 71 SWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI--EDPTGGPYRVGAILQFACND 128
WS +P C P+ CP P++P L + G F C
Sbjct: 110 KWSPELPVCA------------PIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLP 157
Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKII-PLKFFYDPGDHIQVTCND 187
+H + G +TI CT G W++ P + +C +P P NG + P K D C+D
Sbjct: 158 QHAMFGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHD 217
Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
GY + C G WS +P C
Sbjct: 218 GYS----LDGPEEIECTKLGNWS-AMPSC 241
Score = 130 bits (329), Expect = 5e-37
Identities = 60/222 (27%), Positives = 84/222 (37%), Gaps = 34/222 (15%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVEN-----PYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD 63
+G+WS E+P C IICP + Y N+ YR A+F+C + + G
Sbjct: 107 EEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDT 166
Query: 64 IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
I C +G+W+ PEC V CP P+ P NG + P
Sbjct: 167 ITCTTHGNWTKL-PEC------------REVKCPFPSRPDNGF-VNYPAKPTLYYKDKAT 212
Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKF--------FY 175
F C+D + L G E I CT+ G WS A P CKA C+ P + +
Sbjct: 213 FGCHDGYSLDGPEEIECTKLGNWS-AMPSCKASCKVPVKKATVVYQGERVKIQEKFKNGM 271
Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
GD + C + + DGT +P C
Sbjct: 272 LHGDKVSFFCKNKE----KKCSYTEDAQCIDGTIE--VPKCF 307
Score = 116 bits (291), Expect = 2e-31
Identities = 40/200 (20%), Positives = 63/200 (31%), Gaps = 28/200 (14%)
Query: 25 CPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD-IVCQKNGSWSGAIPECNAF 82
CPK + + ++ + C GY +G +C G W +C
Sbjct: 4 CPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKC--- 60
Query: 83 FFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE 142
P CP + NG + + + F+CN +L G ++ CTE
Sbjct: 61 ---------TPRVCPFAGILENGAV----RYTTFEYPNTISFSCNTGFYLNGADSAKCTE 107
Query: 143 TGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKF----FYDPGDHIQVTCNDGYVKPLDITP 197
G+WS P C C P P + K D C + +
Sbjct: 108 EGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHA----MFG 163
Query: 198 TSGPYCQSDGTWSLDIPHCT 217
C + G W+ +P C
Sbjct: 164 NDTITCTTHGNWT-KLPECR 182
Score = 81.5 bits (201), Expect = 1e-18
Identities = 36/164 (21%), Positives = 57/164 (34%), Gaps = 26/164 (15%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
+ G W+ +P C+++ CP +N ++ + Y+ A F C GY L GP +I C
Sbjct: 171 THGNWTK-LPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIEC 229
Query: 67 QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHL------IEDPTGGPYRVGA 120
K G+WS +P C A C VP I++ G
Sbjct: 230 TKLGNWSA-MPSCKA-------------SCKVPVKKATVVYQGERVKIQEKFKNGMLHGD 275
Query: 121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYPGEP 163
+ F C ++ G P+C K +
Sbjct: 276 KVSFFCKNKEKKCSYTEDAQCIDGTIE--VPKCFKEHTDASDVK 317
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted,
polymorphism, glycoprotein, complement system,
complement pathway, immune response; HET: NAG BMA; 2.70A
{Homo sapiens} PDB: 2rlp_A 2rlq_A
Length = 277
Score = 132 bits (333), Expect = 5e-38
Identities = 54/215 (25%), Positives = 78/215 (36%), Gaps = 26/215 (12%)
Query: 10 QGQWSG--EVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
+G+W + CQ+ C TL N G + C+ GYQL G +
Sbjct: 55 KGEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYR 114
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED--PTGGPYRVGAILQ 123
W+ IP C V C P NG ++ Y G ++
Sbjct: 115 ECDTDGWTNDIPICE------------VVKCLPVTAPENGKIVSSAMEPDREYHFGQAVR 162
Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQ 182
F CN + + G+E + C++ G WS+ P+C C+ P NG I K Y + Q
Sbjct: 163 FVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPDVI-NGSPISQKIIYKENERFQ 221
Query: 183 VTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
CN GY + C G W +P C
Sbjct: 222 YKCNMGYE----YSERGDAVCTESG-WR-PLPSCE 250
Score = 110 bits (277), Expect = 9e-30
Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 24/210 (11%)
Query: 14 SGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG-SW 72
+ C ++ + E + +Q AI++C GY+ G +VC+K
Sbjct: 2 AQPAEDCNELPPRRNT-EILTGSWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCRKGEWVA 60
Query: 73 SGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHL 132
+ +C C P G G + G + CN+ + L
Sbjct: 61 LNPLRKC------------QKRPCGHPGDTPFGT-FTLTGGNVFEYGVKAVYTCNEGYQL 107
Query: 133 LGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKII----PLKFFYDPGDHIQVTCND 187
LGE +T W+ P C+ +C P+NGKI+ Y G ++ CN
Sbjct: 108 LGEINYRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNS 167
Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
GY ++ +C DG WS + P C
Sbjct: 168 GYK--IEGDEEM--HCSDDGFWSKEKPKCV 193
Score = 99.6 bits (248), Expect = 1e-25
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 23/168 (13%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLT----LVEQNNTYRGHAIFQCSWGYQLKGPPD 63
W+ ++P C+ + C + EN + ++ + F C+ GY+++G +
Sbjct: 117 DTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEE 176
Query: 64 IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
+ C +G WS P+C + C P + + Y+ Q
Sbjct: 177 MHCSDDGFWSKEKPKC------------VEISCKSPDVINGSPI---SQKIIYKENERFQ 221
Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYP-GEPQNGKIIP 170
+ CN + VCTE+G W P C+ P + + + +
Sbjct: 222 YKCNMGYEYSERGDAVCTESG-WR-PLPSCEEARGGPEQKLISEEDLN 267
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of
complement pathway, regulator of complement; 2.2A {Homo
sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB:
1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A
2qzh_A 2qzf_A
Length = 254
Score = 131 bits (331), Expect = 6e-38
Identities = 49/218 (22%), Positives = 75/218 (34%), Gaps = 31/218 (14%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLT---LVEQNNTYRGHAIFQCSWGYQLKGPPD--IV 65
QWS C + + + L + + ++C GY+ + +
Sbjct: 53 SQWSDIEEFCNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLT 112
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
C +N WS A+ C CP P NG + G GA + F+
Sbjct: 113 CLQNLKWSTAVEFCK------------KKSCPNPGEIRNGQID---VPGGILFGATISFS 157
Query: 126 CNDRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHI 181
CN + L G + C +G +WS P C+ C P + NG I + Y +
Sbjct: 158 CNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSV 217
Query: 182 QVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHC 216
CN G+ + YC +G WS P C
Sbjct: 218 TYACNKGFT----MIGEHSIYCTVNNDEGEWSGPPPEC 251
Score = 101 bits (254), Expect = 1e-26
Identities = 42/154 (27%), Positives = 62/154 (40%), Gaps = 22/154 (14%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
+WS V C++ CP + N + V + F C+ GY+L G C
Sbjct: 115 QNLKWSTAVEFCKKKSCPNPGEIRNGQID-VPGGILFGATISFSCNTGYKLFGSTSSFCL 173
Query: 68 KNGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
+GS WS +PEC ++CP P NG + Y + +
Sbjct: 174 ISGSSVQWSDPLPEC------------REIYCPAPPQIDNGIIQ--GERDHYGYRQSVTY 219
Query: 125 ACNDRHHLLGEETIVCT---ETGRWSRAPPRCKA 155
ACN ++GE +I CT + G WS PP C+
Sbjct: 220 ACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 253
Score = 101 bits (252), Expect = 3e-26
Identities = 44/203 (21%), Positives = 71/203 (34%), Gaps = 29/203 (14%)
Query: 25 CPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD--IVCQKNGSWSGAIPECN 80
C V N L + + I ++C + ++C K WS C
Sbjct: 4 CGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC- 62
Query: 81 AFFFFFFFFFFNPVHCPVPALPLNGHLI-EDPTGGPYRVGAILQFACNDRHHLLGEET-- 137
C VP + L T + VG ++++ C + +
Sbjct: 63 ------------NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPK 110
Query: 138 IVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDIT 196
+ C + +WS A CK C PGE +NG+I G I +CN GY +
Sbjct: 111 LTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGIL-FGATISFSCNTGYK----LF 165
Query: 197 PTSGPYCQSDGT---WSLDIPHC 216
++ +C G+ WS +P C
Sbjct: 166 GSTSSFCLISGSSVQWSDPLPEC 188
Score = 86.5 bits (214), Expect = 9e-21
Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRC 153
C +P N + ++ + C + + +++++C + +WS C
Sbjct: 4 CGLPPDVPNAQPA-LEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 62
Query: 154 KARCEYPGEPQNGKII---PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
CE P + + + ++ G ++ C GY + + + C + WS
Sbjct: 63 NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYR--REPSLSPKLTCLQNLKWS 120
Query: 211 LDIPHCT 217
+ C
Sbjct: 121 TAVEFCK 127
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 135 bits (342), Expect = 4e-37
Identities = 54/225 (24%), Positives = 74/225 (32%), Gaps = 31/225 (13%)
Query: 9 SQGQWSG---------EVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQL 58
S G WS C+ I CP+ EN F C GY L
Sbjct: 53 STGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTL 112
Query: 59 KGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
+G + CQ NG WSG C+ +C P +P+ G YR+
Sbjct: 113 RGSANRTCQVNGRWSGQTAICDN----------GAGYCSNPGIPIGTRK----VGSQYRL 158
Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEY--PGEPQNGKIIPLKFFYD 176
+ + C+ L G + C E G WS P C+ Y P E + L +
Sbjct: 159 EDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIE 218
Query: 177 PGDHIQVTCNDGYVKPLDITPT-SGP---YCQSDGTWSLDIPHCT 217
G + G + I SG Y DG+ S+ T
Sbjct: 219 -GVDAEDGHGPGEQQKRKIVLDPSGSMNIYLVLDGSGSIGASDFT 262
Score = 118 bits (297), Expect = 5e-31
Identities = 49/216 (22%), Positives = 66/216 (30%), Gaps = 37/216 (17%)
Query: 13 WSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSW 72
WS P C VE + + + C G+ C+ GSW
Sbjct: 3 WSLARPQGS---CSLEGVEIKGGSF--RLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSW 57
Query: 73 SGA---------IPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
S EC +HCP P NG P Y V +
Sbjct: 58 STLKTQDQKTVRKAEC------------RAIHCPRPHDFENGEYW--PRSPYYNVSDEIS 103
Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQNGKIIPLKFFYDPGDH 180
F C D + L G C GRWS C C PG P + + ++ D
Sbjct: 104 FHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRL--EDS 161
Query: 181 IQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
+ C+ G + + CQ G+WS P C
Sbjct: 162 VTYHCSRGLT----LRGSQRRTCQEGGSWSGTEPSC 193
Score = 89.8 bits (222), Expect = 6e-21
Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 34/157 (21%)
Query: 72 WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH 131
WS A P+ + C + + + G + + G L++ C +
Sbjct: 3 WSLARPQGS---------------CSLEGVEIKGG-----SFRLLQEGQALEYVCPSGFY 42
Query: 132 LLGEETIVCTETGRWSRAP---------PRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHI 181
+T C TG WS C+A C P + +NG+ P +Y+ D I
Sbjct: 43 PYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEI 102
Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
C DGY + ++ CQ +G WS C N
Sbjct: 103 SFHCYDGYT----LRGSANRTCQVNGRWSGQTAICDN 135
Score = 50.1 bits (119), Expect = 2e-07
Identities = 20/81 (24%), Positives = 24/81 (29%), Gaps = 9/81 (11%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGH-AIFQCSWGYQLK--------GP 61
G WSG P+CQ E L T G A G Q K G
Sbjct: 184 GSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIEGVDAEDGHGPGEQQKRKIVLDPSGS 243
Query: 62 PDIVCQKNGSWSGAIPECNAF 82
+I +GS S +
Sbjct: 244 MNIYLVLDGSGSIGASDFTGA 264
Score = 43.2 bits (101), Expect = 3e-05
Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 9/66 (13%)
Query: 145 RWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ 204
WS A P+ C G G L G ++ C G+ P C+
Sbjct: 2 PWSLARPQG--SCSLEGVEIKGGSFRL---LQEGQALEYVCPSGFY----PYPVQTRTCR 52
Query: 205 SDGTWS 210
S G+WS
Sbjct: 53 STGSWS 58
>1rid_A Complement control protein; regulation, SCR, immune system; HET:
IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1
g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A
1vvc_A 1vvd_A 1vve_A
Length = 244
Score = 128 bits (324), Expect = 5e-37
Identities = 48/219 (21%), Positives = 80/219 (36%), Gaps = 28/219 (12%)
Query: 4 PVFRVSQGQWSGEVPTCQQIICPKIV-VENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP 62
P++ G C + CP ++N L + + + C+ GY L G
Sbjct: 46 PIYAKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDI--GGVDFGSSITYSCNSGYHLIGES 103
Query: 63 DIVCQK----NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
C+ + W+ P C V C P NG Y
Sbjct: 104 KSYCELGSTGSMVWNPEAPICE------------SVKCQSPPSISNGRHN--GYEDFYTD 149
Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDP 177
G+++ ++CN + L+G ++C+ G WS PP C+ +C +P K Y
Sbjct: 150 GSVVTYSCNSGYSLIGNSGVLCSG-GEWS-DPPTCQIVKCPHPTISNGYLSSGFKRSYSY 207
Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
D++ C GY ++ +S C TW ++P C
Sbjct: 208 NDNVDFKCKYGYK----LSGSSSSTCSPGNTWKPELPKC 242
Score = 111 bits (280), Expect = 1e-30
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 28/203 (13%)
Query: 20 CQQIICPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPE 78
C P + +N T N + C GY+ + I + G+ +
Sbjct: 2 CTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 61
Query: 79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETI 138
C CP P NG L G G+ + ++CN +HL+GE
Sbjct: 62 C------------IKRRCPSPRDIDNGQL----DIGGVDFGSSITYSCNSGYHLIGESKS 105
Query: 139 VC----TETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPL 193
C T + W+ P C++ +C+ P NG+ + FY G + +CN GY
Sbjct: 106 YCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYS--- 162
Query: 194 DITPTSGPYCQSDGTWSLDIPHC 216
+ SG C G WS D P C
Sbjct: 163 -LIGNSGVLCS-GGEWS-DPPTC 182
Score = 44.5 bits (105), Expect = 8e-06
Identities = 12/61 (19%), Positives = 17/61 (27%), Gaps = 4/61 (6%)
Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
+ +N Y+ GD I+ C GY Y + GT C
Sbjct: 7 RPINMKFKNSVETDANANYNIGDTIEYLCLPGYR----KQKMGPIYAKCTGTGWTLFNQC 62
Query: 217 T 217
Sbjct: 63 I 63
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF,
virus-receptor complex, antigen, blood group antigen,
complement pathway, GPI-anchor; 14.00A {Homo sapiens}
SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Length = 316
Score = 130 bits (328), Expect = 7e-37
Identities = 51/218 (23%), Positives = 75/218 (34%), Gaps = 31/218 (14%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGH---AIFQCSWGYQLKGP--PDIV 65
QWS C + + + L Y ++C GY+ + P +
Sbjct: 116 SQWSDIEEFCNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLT 175
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
C +N WS A+ C CP P NG + G GA + F+
Sbjct: 176 CLQNLKWSTAVEFCK------------KKSCPNPGEIRNGQID---VPGGILFGATISFS 220
Query: 126 CNDRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHI 181
CN + L G + C +G +WS P C+ C P + NG I + Y +
Sbjct: 221 CNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSV 280
Query: 182 QVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHC 216
CN G+ + YC +G WS P C
Sbjct: 281 TYACNKGFT----MIGEHSIYCTVNNDEGEWSGPPPEC 314
Score = 110 bits (276), Expect = 2e-29
Identities = 47/222 (21%), Positives = 75/222 (33%), Gaps = 32/222 (14%)
Query: 9 SQGQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD-- 63
QWS C + V N L + + I ++C +
Sbjct: 50 KGSQWSDIEEFCNRSQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDS 109
Query: 64 IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI-EDPTGGPYRVGAIL 122
++C K WS C C VP + L T + VG ++
Sbjct: 110 VICLKGSQWSDIEEFC-------------NRSCEVPTRLNSASLKQPYITQNYFPVGTVV 156
Query: 123 QFACNDRHHLLG--EETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPL-KFFYDPG 178
++ C + + C + +WS A CK C PGE +NG+I + G
Sbjct: 157 EYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILF--G 214
Query: 179 DHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHCT 217
I +CN GY + ++ +C G+ WS +P C
Sbjct: 215 ATISFSCNTGYK----LFGSTSSFCLISGSSVQWSDPLPECR 252
Score = 103 bits (258), Expect = 1e-26
Identities = 30/196 (15%), Positives = 63/196 (32%), Gaps = 22/196 (11%)
Query: 30 VENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD--IVCQKNGSWSGAIPECNAFFFFF 86
V N L + + I ++C + ++C K WS CN
Sbjct: 9 VPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR----- 63
Query: 87 FFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG--EETIVCTETG 144
C +P N + ++ + C + + +++++C +
Sbjct: 64 ------SQDCGLPPDVPNAQ-PALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGS 116
Query: 145 RWSRAPPRCKARCEYPGEPQNGKII---PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGP 201
+WS C CE P + + + ++ G ++ C GY + + +
Sbjct: 117 QWSDIEEFCNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYR--REPSLSPKL 174
Query: 202 YCQSDGTWSLDIPHCT 217
C + WS + C
Sbjct: 175 TCLQNLKWSTAVEFCK 190
Score = 101 bits (254), Expect = 4e-26
Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 20/153 (13%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
+WS V C++ CP V + F C+ GY+L G C
Sbjct: 178 QNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLI 237
Query: 69 NGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
+GS WS +PEC ++CP P NG + Y + +A
Sbjct: 238 SGSSVQWSDPLPEC------------REIYCPAPPQIDNGIIQ--GERDHYGYRQSVTYA 283
Query: 126 CNDRHHLLGEETIVCT---ETGRWSRAPPRCKA 155
CN ++GE +I CT + G WS PP C+
Sbjct: 284 CNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 316
>2xrb_A Complement regulatory protein CRRY; immune system, immunology;
2.50A {Rattus norvegicus} PDB: 2xrd_A
Length = 290
Score = 126 bits (317), Expect = 1e-35
Identities = 48/222 (21%), Positives = 82/222 (36%), Gaps = 32/222 (14%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC---Q 67
W+ C + C + + V + + + C+ GY+L G +C
Sbjct: 85 SVWTSPQDVCIRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISD 144
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
++ +W P C + C +P NG P + G ++ + CN
Sbjct: 145 QSVAWDAEAPIC------------ESIPCEIPPSIPNGDFF-SPNREDFHYGMVVTYQCN 191
Query: 128 D------RHHLLGEETIVCT----ETGRWSRAPPRCKA-RCEYPGEPQNGKII-PLKFFY 175
+L+GE +I CT + G WS PP+C P +N I+ K +
Sbjct: 192 TDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLF 251
Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
D ++ C DG++ + S YC+S W +P C
Sbjct: 252 SLRDMVEFRCQDGFM----MKGDSSVYCRSLNRWEPQLPSCA 289
Score = 106 bits (265), Expect = 6e-28
Identities = 44/225 (19%), Positives = 68/225 (30%), Gaps = 33/225 (14%)
Query: 9 SQGQWSGEVPTCQQI------ICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP 62
+ + P P E ++C GY +K
Sbjct: 19 GGVHLAVLLLFLSPSTLGQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQF 77
Query: 63 DIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAIL 122
I C+ N W+ C C P P NG + R G+ +
Sbjct: 78 SITCEVNSVWTSPQDVC------------IRKQCETPLDPQNGIVHV---NTDIRFGSSI 122
Query: 123 QFACNDRHHLLGEETIVCT---ETGRWSRAPPRCKAR-CEYPGEPQNGKII-PLKFFYDP 177
+ CN+ + L+G + +C ++ W P C++ CE P NG P + +
Sbjct: 123 TYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHY 182
Query: 178 GDHIQVTCNDGYVKPLDITPTSGP--YCQS----DGTWSLDIPHC 216
G + CN P +C S G WS P C
Sbjct: 183 GMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQC 227
Score = 98.9 bits (246), Expect = 3e-25
Identities = 33/168 (19%), Positives = 54/168 (32%), Gaps = 13/168 (7%)
Query: 51 QCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED 110
+ S G C+ + + + CP P L I
Sbjct: 2 EASSPLDPVGRLVAFCRGGVHLAVLLLFLSP---------STLGQCPAPPLFPYAKPINP 52
Query: 111 PTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKII 169
+ VG L++ C ++ + +I C W+ C + CE P +PQNG +
Sbjct: 53 TDESTFPVGTSLKYECRP-GYIKRQFSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVH 111
Query: 170 PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
G I TCN+GY + + + W + P C
Sbjct: 112 VNT-DIRFGSSITYTCNEGY-RLIGSSSAMCIISDQSVAWDAEAPICE 157
Score = 92.8 bits (230), Expect = 7e-23
Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 25/157 (15%)
Query: 11 GQWSGEVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAI-FQCSWG------YQLKGPP 62
W E P C+ I C + N + + + G + +QC+ + L G P
Sbjct: 147 VAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEP 206
Query: 63 DIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
I C + G WSG P+C ++ P N I + +
Sbjct: 207 SIHCTSIDGQVGVWSGPPPQCI------------ELNKCTPPHVENAV-IVSKNKSLFSL 253
Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA 155
+++F C D + G+ ++ C RW P C A
Sbjct: 254 RDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSCAA 290
Score = 65.0 bits (158), Expect = 9e-13
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
G WSG P C ++ VEN + ++ + R F+C G+ +KG + C
Sbjct: 216 QVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYC 275
Query: 67 QKNGSWSGAIPECNA 81
+ W +P C A
Sbjct: 276 RSLNRWEPQLPSCAA 290
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex,
echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo
sapiens}
Length = 381
Score = 126 bits (318), Expect = 6e-35
Identities = 49/219 (22%), Positives = 75/219 (34%), Gaps = 31/219 (14%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLT---LVEQNNTYRGHAIFQCSWGYQLKGPPD--IV 65
QWS C + + + L + + ++C GY+ + +
Sbjct: 85 SQWSDIEEFCNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLT 144
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
C +N WS A+ C CP P NG + G GA + F+
Sbjct: 145 CLQNLKWSTAVEFCK------------KKSCPNPGEIRNGQI---DVPGGILFGATISFS 189
Query: 126 CNDRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHI 181
CN + L G + C +G +WS P C+ C P + NG I + Y +
Sbjct: 190 CNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSV 249
Query: 182 QVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHCT 217
CN G+ + YC +G WS P C
Sbjct: 250 TYACNKGFT----MIGEHSIYCTVNNDEGEWSGPPPECR 284
Score = 110 bits (277), Expect = 5e-29
Identities = 45/215 (20%), Positives = 69/215 (32%), Gaps = 32/215 (14%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
+WS V C++ CP V + F C+ GY+L G C
Sbjct: 147 QNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLI 206
Query: 69 NGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
+GS WS +PEC ++CP P NG + Y + +A
Sbjct: 207 SGSSVQWSDPLPEC------------REIYCPAPPQIDNGIIQ--GERDHYGYRQSVTYA 252
Query: 126 CNDRHHLLGEETIVCT---ETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQ 182
CN ++GE +I CT + G WS PP C+ + P +
Sbjct: 253 CNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRGKSLTSKVPPT---------VQKPTTVN 303
Query: 183 VTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
V + T+ + + P
Sbjct: 304 VPTTEVSPTS---QKTTTKTTTPNAQATRSTPVSR 335
Score = 97.4 bits (242), Expect = 4e-24
Identities = 45/210 (21%), Positives = 72/210 (34%), Gaps = 28/210 (13%)
Query: 17 VPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD--IVCQKNGSWS 73
+P Q V N L + + I ++C + ++C K WS
Sbjct: 29 LPAVWQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWS 88
Query: 74 GAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI-EDPTGGPYRVGAILQFACNDRHHL 132
C C VP + L T + VG ++++ C +
Sbjct: 89 DIEEFC-------------NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRR 135
Query: 133 LG--EETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
+ C + +WS A CK C PGE +NG+I G I +CN GY
Sbjct: 136 EPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGIL-FGATISFSCNTGY 194
Query: 190 VKPLDITPTSGPYCQSDGT---WSLDIPHC 216
+ ++ +C G+ WS +P C
Sbjct: 195 K----LFGSTSSFCLISGSSVQWSDPLPEC 220
Score = 84.3 bits (208), Expect = 2e-19
Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 34/187 (18%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
S QWS +P C++I CP ++N + + YR + C+ G+ + G I C
Sbjct: 209 SSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCT 268
Query: 68 ---KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
G WSG PEC + VP + PT
Sbjct: 269 VNNDEGEWSGPPPECRG----------KSLTSKVPPTVQKPTTVNVPT------------ 306
Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQV 183
T T + +R+ P + + + P G G +
Sbjct: 307 -TEVSPTSQKTTTKTTTPNAQATRSTPVSRTTKHFHETTPNKGSGTT------SGTTRLL 359
Query: 184 TCNDGYV 190
+ + +
Sbjct: 360 SGHTCFT 366
Score = 82.0 bits (202), Expect = 1e-18
Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRC 153
C +P N + ++ + C + + +++++C + +WS C
Sbjct: 36 CGLPPDVPNAQPA-LEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 94
Query: 154 KARCEYPGEPQNGKII---PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
CE P + + + ++ G ++ C GY + + + C + WS
Sbjct: 95 NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYR--REPSLSPKLTCLQNLKWS 152
Query: 211 LDIPHCT 217
+ C
Sbjct: 153 TAVEFCK 159
Score = 52.7 bits (126), Expect = 2e-08
Identities = 16/133 (12%), Positives = 26/133 (19%), Gaps = 28/133 (21%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
+G+WSG P C+ P + N +
Sbjct: 272 DEGEWSGPPPECRGKSLT--SKVPPTVQKPTTVNVP------TTEVSPTSQKTTTKTTTP 323
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
N + + P P G G + +
Sbjct: 324 NAQATRSTPVSR------------TTKHFHETTPNKGSG--------TTSGTTRLLSGHT 363
Query: 129 RHHLLGEETIVCT 141
L G + T
Sbjct: 364 CFTLTGLLGTLVT 376
Score = 36.2 bits (83), Expect = 0.006
Identities = 6/64 (9%), Positives = 12/64 (18%), Gaps = 6/64 (9%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
Q + P + + T + + L G +
Sbjct: 323 PNAQATRSTPVSRTTKHF-----HETTPNKGSGTTSGTTRLLSGHTCFTLTGLLGTLVT- 376
Query: 69 NGSW 72
G
Sbjct: 377 MGLL 380
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain,
immune system; NMR {Homo sapiens}
Length = 951
Score = 129 bits (325), Expect = 1e-34
Identities = 50/216 (23%), Positives = 83/216 (38%), Gaps = 21/216 (9%)
Query: 9 SQGQWSGEVPTCQQ----IICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD 63
G WSG P C + CP V++ Y + + C+ G+ + G
Sbjct: 748 GHGSWSGPSPQCLRSPPVTRCPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRV 807
Query: 64 IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
I C + +W +P C + CP P NG+ + G +
Sbjct: 808 IRCHTDNTWVPGVPTCIKK---------AFIGCPPPPKTPNGNHT-GGNIARFSPGMSIL 857
Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKII-PLKFFYDPGDHI 181
++C+ + L+GE ++CT G WS+ P CK C P + + + Y G +
Sbjct: 858 YSCDQGYLLVGEALLLCTHEGTWSQPAPHCKEVNCSSPADMDGIQKGLEPRKMYQYGAVV 917
Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ C DGY+ + + CQSD W+ + C
Sbjct: 918 TLECEDGYM----LEGSPQSQCQSDHQWNPPLAVCR 949
Score = 121 bits (304), Expect = 7e-32
Identities = 48/214 (22%), Positives = 72/214 (33%), Gaps = 19/214 (8%)
Query: 9 SQGQWSGEVPTCQQII----CPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDI 64
G W P C+ CP+ +V Y + F C + + G +
Sbjct: 51 VDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSV 110
Query: 65 VCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
CQ N W F P+ CP + NGH + G G + +
Sbjct: 111 WCQANNMWGPTRLPTCVSVF--------PLECPALPMIHNGHHTSEN-VGSIAPGLSVTY 161
Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQV 183
+C + L+GE+ I C +G+WS PP C+ RC+ G NGK+ G
Sbjct: 162 SCESGYLLVGEKIINCLSSGKWSAVPPTCEEARCKSLGRFPNGKVKE-PPILRVGVTANF 220
Query: 184 TCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
C++GY + C G
Sbjct: 221 FCDEGYR----LQGPPSSRCVIAGQGVAWTKMPV 250
Score = 119 bits (299), Expect = 4e-31
Identities = 56/220 (25%), Positives = 80/220 (36%), Gaps = 25/220 (11%)
Query: 9 SQGQWSGEVPTCQQIICPK-IVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
G W ++P C+ I C V+ N T + N Y ++C G+ L G + C
Sbjct: 683 ENGIWFKKIPLCKVIHCHPPPVIVNGKHTGMMAENFLYGNEVSYECDQGFYLLGEKKLQC 742
Query: 67 Q----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAIL 122
+ +GSWSG P+C CP P + L + T Y I+
Sbjct: 743 RSDSKGHGSWSGPSPQCLRSP--------PVTRCPNPEVKHGYKL--NKTHSAYSHNDIV 792
Query: 123 QFACNDRHHLLGEETIVCTETGRWSRAPPRCKA----RCEYPGEPQNGKIIPLKF-FYDP 177
CN + G I C W P C C P + NG + P
Sbjct: 793 YVDCNPGFIMNGSRVIRCHTDNTWVPGVPTCIKKAFIGCPPPPKTPNGNHTGGNIARFSP 852
Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
G I +C+ GY+ + + C +GTWS PHC
Sbjct: 853 GMSILYSCDQGYL----LVGEALLLCTHEGTWSQPAPHCK 888
Score = 116 bits (291), Expect = 4e-30
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 28/212 (13%)
Query: 11 GQWSGEVPT----CQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
G WSG P + CP + + +++ + F C +G+ LKG I
Sbjct: 313 GTWSGPAPRCELSTSAVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIR 372
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
C G+W + P C C P LNG ED + G ++++
Sbjct: 373 CNAQGTWEPSAPVC-------------EKECQAPPNILNGQ-KEDRHMVRFDPGTSIKYS 418
Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
CN + L+GEE+I CT G W+ P+CK CE G K + +
Sbjct: 419 CNPGYVLVGEESIQCTSEGVWTPPVPQCKVAACEATGRQLLTKPQH----QFVRPDVNSS 474
Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
C +GY ++ + CQ W ++I C
Sbjct: 475 CGEGYK----LSGSVYQECQGTIPWFMEIRLC 502
Score = 115 bits (290), Expect = 5e-30
Identities = 55/221 (24%), Positives = 84/221 (38%), Gaps = 27/221 (12%)
Query: 10 QGQWSGEVPTCQQIICPKI--VVENPYLTLVEQNNTYRGHAIFQC------SWGYQLKGP 61
QG ++P C++I CP ++ ++ N +Y + C + L G
Sbjct: 241 QGVAWTKMPVCEEIFCPSPPPILNGRHIGNSLANVSYGSIVTYTCDPDPEEGVNFILIGE 300
Query: 62 PDIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYR 117
+ C K G+WSG P C + V CP P + + Y
Sbjct: 301 STLRCTVDSQKTGTWSGPAPRCELST--------SAVQCPHPQILRGRMVS--GQKDRYT 350
Query: 118 VGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL-KFFYD 176
+ FAC L G + I C G W + P C+ C+ P NG+ +D
Sbjct: 351 YNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCEKECQAPPNILNGQKEDRHMVRFD 410
Query: 177 PGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
PG I+ +CN GYV + C S+G W+ +P C
Sbjct: 411 PGTSIKYSCNPGYV----LVGEESIQCTSEGVWTPPVPQCK 447
Score = 112 bits (281), Expect = 9e-29
Identities = 47/218 (21%), Positives = 66/218 (30%), Gaps = 27/218 (12%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
+QG W P C++ + N G +I + C+ GY L G I C
Sbjct: 375 AQGTWEPSAPVCEKECQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVGEESIQCT 434
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
G W+ +P+C C L V + +C
Sbjct: 435 SEGVWTPPVPQCK------------VAACEATGRQLLTK------PQHQFVRPDVNSSCG 476
Query: 128 DRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFF-YDPGDHIQVTC 185
+ + L G C T W CK C P NG + G + TC
Sbjct: 477 EGYKLSGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFPYGTTVTYTC 536
Query: 186 NDGYVKPLDI------TPTSGPYCQSDGTWSLDIPHCT 217
N G + ++ T Q GTWS P C
Sbjct: 537 NPGPERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCK 574
Score = 110 bits (277), Expect = 3e-28
Identities = 47/218 (21%), Positives = 76/218 (34%), Gaps = 28/218 (12%)
Query: 9 SQGQWSGEVPTCQ----QIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD 63
+G WSG P C+ + C + + N Y ++ + + F+C G+ LKG
Sbjct: 562 ERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQ 621
Query: 64 IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
I C+ + +W IP C C L ++
Sbjct: 622 IRCKADNTWDPEIPVCE------------KETCQHVRQSLQELPA-------GSRVELVN 662
Query: 124 FACNDRHHLLGEETIVCT--ETGRWSRAPPRCKAR-CEYPGEPQNGKII-PLKFFYDPGD 179
+C D + L G +C E G W + P CK C P NGK + + G+
Sbjct: 663 TSCQDGYQLTGHAYQMCQDAENGIWFKKIPLCKVIHCHPPPVIVNGKHTGMMAENFLYGN 722
Query: 180 HIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ C+ G+ + + G+WS P C
Sbjct: 723 EVSYECDQGFYLLGEKKLQCRSDSKGHGSWSGPSPQCL 760
Score = 101 bits (252), Expect = 6e-25
Identities = 41/206 (19%), Positives = 64/206 (31%), Gaps = 26/206 (12%)
Query: 23 IICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC----QKNGSWSGAIP 77
I C + N ++ + CS ++L G ++C + +G+W P
Sbjct: 1 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 60
Query: 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEET 137
+C F CP P +P + PYR G + FAC + G ++
Sbjct: 61 KCEY--------FNKYSSCPEPIVPGGYKI---RGSTPYRHGDSVTFACKTNFSMNGNKS 109
Query: 138 IVCTETGRWSRAPPRCKARCE-----YPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVK 191
+ C W NG PG + +C GY+
Sbjct: 110 VWCQANNMWGPTRLPTCVSVFPLECPALPMIHNGHHTSENVGSIAPGLSVTYSCESGYL- 168
Query: 192 PLDITPTSGPYCQSDGTWSLDIPHCT 217
+ C S G WS P C
Sbjct: 169 ---LVGEKIINCLSSGKWSAVPPTCE 191
Score = 100 bits (251), Expect = 8e-25
Identities = 44/220 (20%), Positives = 65/220 (29%), Gaps = 30/220 (13%)
Query: 11 GQWSGEVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAI-FQC------SWGYQLKGPP 62
W E+ C++I CP V+ N T + G + + C + L G
Sbjct: 493 IPWFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFPYGTTVTYTCNPGPERGVEFSLIGES 552
Query: 63 DIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
I C + G+WSG P C V C + + PY
Sbjct: 553 TIRCTSNDQERGTWSGPAPLCKLSL--------LAVQCSHVHIANGYKI--SGKEAPYFY 602
Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFFYDP 177
+ F C L G I C W P C+ C++ +
Sbjct: 603 NDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQSLQELPA-----GSR 657
Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ + +C DGY +G W IP C
Sbjct: 658 VELVNTSCQDGYQLTGHAYQMC--QDAENGIWFKKIPLCK 695
Score = 99.4 bits (247), Expect = 3e-24
Identities = 49/225 (21%), Positives = 74/225 (32%), Gaps = 31/225 (13%)
Query: 9 SQGQWSGEVPTCQQIICPKI-----VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPP 62
+ W + P ++ N + T + G ++ + C GY L G
Sbjct: 114 ANNMWGPTRLPTCVSVFPLECPALPMIHNGHHTSENVGSIAPGLSVTYSCESGYLLVGEK 173
Query: 63 DIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAIL 122
I C +G WS P C C NG + E P RVG
Sbjct: 174 IINCLSSGKWSAVPPTCE------------EARCKSLGRFPNGKVKEPPI---LRVGVTA 218
Query: 123 QFACNDRHHLLGEETIVCTETGR---WSRAPPRCKARCEYPGEPQNGKIIPLKF-FYDPG 178
F C++ + L G + C G+ W++ P + C P NG+ I G
Sbjct: 219 NFFCDEGYRLQGPPSSRCVIAGQGVAWTKMPVCEEIFCPSPPPILNGRHIGNSLANVSYG 278
Query: 179 DHIQVTCNDGYVKPLDITPTSGP--YCQSD----GTWSLDIPHCT 217
+ TC+ + ++ C D GTWS P C
Sbjct: 279 SIVTYTCDPDPEEGVNFILIGESTLRCTVDSQKTGTWSGPAPRCE 323
Score = 98.7 bits (245), Expect = 5e-24
Identities = 35/151 (23%), Positives = 50/151 (33%), Gaps = 18/151 (11%)
Query: 11 GQWSGEVPTCQQIICPKI----VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
W VPTC + N T G +I + C GY L G ++
Sbjct: 814 NTWVPGVPTCIKKAFIGCPPPPKTPNGNHTGGNIARFSPGMSILYSCDQGYLLVGEALLL 873
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
C G+WS P C V+C PA Y+ GA++
Sbjct: 874 CTHEGTWSQPAPHCK------------EVNCSSPADMDGIQ-KGLEPRKMYQYGAVVTLE 920
Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKAR 156
C D + L G C +W+ C++R
Sbjct: 921 CEDGYMLEGSPQSQCQSDHQWNPPLAVCRSR 951
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune
system; NMR {Mus musculus}
Length = 551
Score = 127 bits (321), Expect = 2e-34
Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 35/224 (15%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC--- 66
W+ C + C EN + V + + C+ GY+L G VC
Sbjct: 50 STWTSAEDKCIRKQCKTPSDPENGLVH-VHTGIEFGSRINYTCNQGYRLIGSSSAVCVIT 108
Query: 67 QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
++ W P C + C +P NG T + G ++ + C
Sbjct: 109 DQSVDWDTEAPIC------------EWIPCEIPPGIPNGDFF-SSTREDFHYGMVVTYRC 155
Query: 127 N------DRHHLLGEETIVCT----ETGRWSRAPPRCKA--RCEYPGEPQNGKII-PLKF 173
N +L+GE ++ CT E G WS PP+C +C P +N ++ +
Sbjct: 156 NTDARGKALFNLVGEPSLYCTSNDGEIGVWSGPPPQCIELNKCTPPPYVENAVMLSENRS 215
Query: 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ D ++ C+ G++ + S +CQS W ++P C
Sbjct: 216 LFSLRDIVEFRCHPGFI----MKGASSVHCQSLNKWEPELPSCF 255
Score = 119 bits (300), Expect = 1e-31
Identities = 50/227 (22%), Positives = 83/227 (36%), Gaps = 31/227 (13%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWG------YQLKG 60
W E P C+ I C + N + + Y ++C+ + L G
Sbjct: 110 QSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVG 169
Query: 61 PPDIVCQKN----GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
P + C N G WSG P+C C P N + +
Sbjct: 170 EPSLYCTSNDGEIGVWSGPPPQCIE-----------LNKCTPPPYVENAV-MLSENRSLF 217
Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR--CEYPGEPQNGKI-IPLKF 173
+ I++F C+ + G ++ C +W P C C P E + + +K
Sbjct: 218 SLRDIVEFRCHPGFIMKGASSVHCQSLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKK 277
Query: 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT 220
Y G+++ + C DGY L+ + S CQSDG+W+ + C +
Sbjct: 278 EYYYGENVTLECEDGY--TLEGSSQS--QCQSDGSWNPLLAKCVSRL 320
Score = 103 bits (257), Expect = 9e-26
Identities = 39/207 (18%), Positives = 55/207 (26%), Gaps = 16/207 (7%)
Query: 9 SQGQWSGEVPTCQQII--CPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIV 65
G WSG P C ++ P VEN + ++ + R F+C G+ +KG +
Sbjct: 181 EIGVWSGPPPQCIELNKCTPPPYVENAVMLSENRSLFSLRDIVEFRCHPGFIMKGASSVH 240
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
CQ W +P C ++G Y G +
Sbjct: 241 CQSLNKWEPELPSCF------------KGVICRLPQEMSGFQKGLGMKKEYYYGENVTLE 288
Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTC 185
C D + L G C G W+ E P
Sbjct: 289 CEDGYTLEGSSQSQCQSDGSWNPLLA-KCVSRLADPEVPRDCGCKPCICTVPEVSSVFIF 347
Query: 186 NDGYVKPLDITPTSGPYCQSDGTWSLD 212
L IT T C D
Sbjct: 348 PPKPKDVLTITLTPKVTCVVVDISKDD 374
Score = 101 bits (252), Expect = 4e-25
Identities = 43/204 (21%), Positives = 71/204 (34%), Gaps = 29/204 (14%)
Query: 26 PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFF 85
++ P E + +++C GY +K I C+++ +W+ A +C
Sbjct: 7 SQLPSAKPINLTDESMFPIGTYLLYECLPGY-IKRQFSITCKQDSTWTSAEDKC------ 59
Query: 86 FFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---E 142
C P+ P NG + G+ + + CN + L+G + VC +
Sbjct: 60 ------IRKQCKTPSDPENGLVH---VHTGIEFGSRINYTCNQGYRLIGSSSAVCVITDQ 110
Query: 143 TGRWSRAPPRCKA-RCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSG 200
+ W P C+ CE P NG + + G + CN G
Sbjct: 111 SVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFN-LVG 169
Query: 201 P---YCQSD----GTWSLDIPHCT 217
YC S+ G WS P C
Sbjct: 170 EPSLYCTSNDGEIGVWSGPPPQCI 193
Score = 85.1 bits (210), Expect = 2e-19
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 12/128 (9%)
Query: 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
HCP P+ + I + +G L + C ++ + +I C + W+ A +C
Sbjct: 2 HCPAPSQLPSAKPINLTDESMFPIGTYLLYECLPG-YIKRQFSITCKQDSTWTSAEDKCI 60
Query: 155 AR-CEYPGEPQNGKIIPLK-FFYDPGDHIQVTCNDGYVKPLDITPTSGPYC---QSDGTW 209
+ C+ P +P+NG + + G I TCN GY + +S C W
Sbjct: 61 RKQCKTPSDPENGLVHVHTGIEF--GSRINYTCNQGYR----LIGSSSAVCVITDQSVDW 114
Query: 210 SLDIPHCT 217
+ P C
Sbjct: 115 DTEAPICE 122
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR,
CCP, immune system; NMR {Rattus norvegicus}
Length = 320
Score = 120 bits (303), Expect = 3e-33
Identities = 48/222 (21%), Positives = 82/222 (36%), Gaps = 32/222 (14%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC---Q 67
W+ C + C + + V + + + C+ GY+L G +C
Sbjct: 52 SVWTSPQDVCIRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISD 111
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
++ +W P C + C +P NG P + G ++ + CN
Sbjct: 112 QSVAWDAEAPIC------------ESIPCEIPPSIPNGDFFS-PNREDFHYGMVVTYQCN 158
Query: 128 ------DRHHLLGEETIVCT----ETGRWSRAPPRCKA-RCEYPGEPQNGKII-PLKFFY 175
+L+GE +I CT + G WS PP+C P +N I+ K +
Sbjct: 159 TDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLF 218
Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
D ++ C DG++ + S YC+S W +P C
Sbjct: 219 SLRDMVEFRCQDGFM----MKGDSSVYCRSLNRWEPQLPSCF 256
Score = 118 bits (298), Expect = 2e-32
Identities = 48/226 (21%), Positives = 78/226 (34%), Gaps = 36/226 (15%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWG------YQLKG 60
W E P C+ I C + N + + Y +QC+ + L G
Sbjct: 112 QSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVG 171
Query: 61 PPDIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
P I C + G WSG P+C ++ P N ++ +
Sbjct: 172 EPSIHCTSIDGQVGVWSGPPPQCI------------ELNKCTPPHVENAVIVS-KNKSLF 218
Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR---CEYPGEPQNGKIIPLKF 173
+ +++F C D + G+ ++ C RW P C + GE NG + +
Sbjct: 219 SLRDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSCFKVKSCGAFLGELPNGHVFVPQN 278
Query: 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHC 216
G + CN GY + S +C DG W+ +P C
Sbjct: 279 LQ-LGAKVTFVCNTGYQ----LKGNSSSHCVLDGVESIWNSSVPVC 319
Score = 98.9 bits (246), Expect = 6e-25
Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 18/149 (12%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQK 68
G WSG P C ++ VEN + ++ + R F+C G+ +KG + C+
Sbjct: 185 GVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRS 244
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
W +P C NGH+ ++GA + F CN
Sbjct: 245 LNRWEPQLPSCFK----------VKSCGAFLGELPNGHVFV---PQNLQLGAKVTFVCNT 291
Query: 129 RHHLLGEETIVCTETGR---WSRAPPRCK 154
+ L G + C G W+ + P C+
Sbjct: 292 GYQLKGNSSSHCVLDGVESIWNSSVPVCE 320
Score = 95.5 bits (237), Expect = 1e-23
Identities = 41/181 (22%), Positives = 63/181 (34%), Gaps = 27/181 (14%)
Query: 48 AIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHL 107
++C GY +K I C+ N W+ C C P P NG +
Sbjct: 31 LKYECRPGY-IKRQFSITCEVNSVWTSPQDVC------------IRKQCETPLDPQNGIV 77
Query: 108 IEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAPPRCKA-RCEYPGEP 163
R G+ + + CN+ + L+G + +C ++ W P C++ CE P
Sbjct: 78 ---HVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSI 134
Query: 164 QNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGP--YCQS----DGTWSLDIPHC 216
NG P + + G + CN P +C S G WS P C
Sbjct: 135 PNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQC 194
Query: 217 T 217
Sbjct: 195 I 195
Score = 83.1 bits (205), Expect = 3e-19
Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 4/128 (3%)
Query: 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
CP P L I + VG L++ C ++ + +I C W+ C
Sbjct: 3 GQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRP-GYIKRQFSITCEVNSVWTSPQDVC 61
Query: 154 KAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLD 212
+ CE P +PQNG + G I TCN+GY + + + W +
Sbjct: 62 IRKQCETPLDPQNGIVHVNTDIR-FGSSITYTCNEGY-RLIGSSSAMCIISDQSVAWDAE 119
Query: 213 IPHCTNYT 220
P C +
Sbjct: 120 APICESIP 127
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate
pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A
3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Length = 1213
Score = 123 bits (310), Expect = 1e-32
Identities = 53/213 (24%), Positives = 76/213 (35%), Gaps = 24/213 (11%)
Query: 11 GQWSGE--VPTCQQIICPKI-VVENPYLTLVEQNNTYRG-HAIFQCSWGYQLKGPPDIVC 66
G+W + CQ+ C TL N G A++ C+ GYQL G +
Sbjct: 51 GEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRE 110
Query: 67 QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED--PTGGPYRVGAILQF 124
W+ IP C V C P NG ++ Y G ++F
Sbjct: 111 CDTDGWTNDIPICEV------------VKCLPVTAPENGKIVSSAMEPDREYHFGQAVRF 158
Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
CN + + G+E + C++ G WS+ P+C + NG I K Y + Q
Sbjct: 159 VCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPDVINGSPISQKIIYKENERFQYK 218
Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
CN GY + C G L P C
Sbjct: 219 CNMGYE----YSERGDAVCTESGWRPL--PSCE 245
Score = 110 bits (275), Expect = 6e-28
Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 26/214 (12%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQKN 69
+W+G V+N Y+ + + +QC Y++ G +++C N
Sbjct: 1017 SRWTGRPTCRDTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-N 1075
Query: 70 GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR 129
G+W+ P+C + C P NG + P Y + +++ C +
Sbjct: 1076 GNWTEP-PQCKD----------STGKCGPPPPIDNGDITSFP-LSVYAPASSVEYQCQNL 1123
Query: 130 HHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL------KFFYDPGDHIQV 183
+ L G + I C G+WS PP+C C E I L K + G+ ++
Sbjct: 1124 YQLEGNKRITCRN-GQWS-EPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEF 1181
Query: 184 TCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
C GY ++ S + L+ P C
Sbjct: 1182 VCKRGYR----LSSRSHTLRTTCWDGKLEYPTCA 1211
Score = 108 bits (271), Expect = 2e-27
Identities = 43/214 (20%), Positives = 75/214 (35%), Gaps = 27/214 (12%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTL----VEQNNTYRGHAIFQCSWGYQLKGPPD 63
W+ ++P C+ + C + EN + ++ + F C+ GY+++G +
Sbjct: 112 DTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEE 171
Query: 64 IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
+ C +G WS P+C + C P + + Y+ Q
Sbjct: 172 MHCSDDGFWSKEKPKC------------VEISCKSPDVINGSPI---SQKIIYKENERFQ 216
Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQV 183
+ CN + VCTE+G P C+ + NG PL+ + GD I
Sbjct: 217 YKCNMGYEYSERGDAVCTESGWRP--LPSCEEKSCDNPYIPNGDYSPLRIKHRTGDEITY 274
Query: 184 TCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
C +G+ + W P CT
Sbjct: 275 QCRNGFYPATRGNTA----KCTSTGWI-PAPRCT 303
Score = 101 bits (253), Expect = 4e-25
Identities = 34/210 (16%), Positives = 57/210 (27%), Gaps = 18/210 (8%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
+Q WS VP ++ P + EN Y + C GY L V
Sbjct: 357 TQDGWSPAVPCLRKCYFPYL--ENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCM 414
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
WS P C V + + + Y + ++ C
Sbjct: 415 ENGWSP-TPRCI------------RVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKL 461
Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDG 188
+ ET G+ + + N + ++ D + C+DG
Sbjct: 462 GYVTADGETSGSIRCGKDGWSAQPTCIKSCDIPVFMNARTKNDFTWFKLNDTLDYECHDG 521
Query: 189 YVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
Y T ++ D+P C
Sbjct: 522 YES---NTGSTTGSIVCGYNGWSDLPICYE 548
Score = 100 bits (251), Expect = 7e-25
Identities = 37/211 (17%), Positives = 60/211 (28%), Gaps = 24/211 (11%)
Query: 11 GQWSGEVPTCQ---QIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
G+W EV Q+ P + N + N C Y ++ +I C+
Sbjct: 777 GRWDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGEEITCK 836
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI-EDPTGGPYRVGAILQFAC 126
+G W + C P +G + + Y G L + C
Sbjct: 837 -DGRWQSIPLCVE------------KIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTC 883
Query: 127 NDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCN 186
+ E C S P C+ P E +G + + Y G+ + C
Sbjct: 884 EGGFRISEENETTCYMGKWSS-PPQCEGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCF 942
Query: 187 DGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+G+ WS P C
Sbjct: 943 EGFG-----IDGPAIAKCLGEKWS-HPPSCI 967
Score = 96.4 bits (239), Expect = 3e-23
Identities = 42/213 (19%), Positives = 76/213 (35%), Gaps = 22/213 (10%)
Query: 8 VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
V ++P C + C ++ + +++ F C G+ + GP + C
Sbjct: 534 VCGYNGWSDLPICYERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQC 593
Query: 67 QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
G S +P C C P LNG+ +++ T Y ++++ C
Sbjct: 594 YHFG-LSPDLPICKE----------QVQSCGPPPELLNGN-VKEKTKEEYGHSEVVEYYC 641
Query: 127 NDRHHLLGEETIVCTETGRWSRAPPRCKAR--CEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
N R + G I C + G W+ P C E ++G Y GD ++
Sbjct: 642 NPRFLMKGPNKIQCVD-GEWTTLPVCIVEESTCGDIPELEHGWAQLSSPPYYYGDSVEFN 700
Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
C++ + + C G W+ +P C
Sbjct: 701 CSESFT----MIGHRSITCI-HGVWT-QLPQCV 727
Score = 95.2 bits (236), Expect = 9e-23
Identities = 47/204 (23%), Positives = 74/204 (36%), Gaps = 24/204 (11%)
Query: 19 TCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG-SWSGAIP 77
C ++ + E + +Q AI++C GY+ G +VC+K +
Sbjct: 2 DCNELPPRR-NTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNVIMVCRKGEWVALNPLR 60
Query: 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEET 137
+C C P G G + G + CN+ + LLGE
Sbjct: 61 KC------------QKRPCGHPGDTPFGT-FTLTGGNVFEYGVKAVYTCNEGYQLLGEIN 107
Query: 138 IVCTETGRWSRAPPRCKAR-CEYPGEPQNGKII----PLKFFYDPGDHIQVTCNDGYVKP 192
+T W+ P C+ C P+NGKI+ Y G ++ CN GY
Sbjct: 108 YRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYK-- 165
Query: 193 LDITPTSGPYCQSDGTWSLDIPHC 216
++ +C DG WS + P C
Sbjct: 166 IEGDEEM--HCSDDGFWSKEKPKC 187
Score = 94.8 bits (235), Expect = 1e-22
Identities = 39/212 (18%), Positives = 63/212 (29%), Gaps = 23/212 (10%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
G WS E P C +I C V N + ++C+ GY+ D VC +
Sbjct: 176 DDGFWSKEKPKCVEISCKSPDVINGSPISQKIIYKENERFQYKCNMGYEYSERGDAVCTE 235
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
+G +P C C P +P + P +R G + + C +
Sbjct: 236 SGWRP--LPSCEE------------KSCDNPYIPNGDYS---PLRIKHRTGDEITYQCRN 278
Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIP----LKFFYDPGDHIQVT 184
+ + W AP C+YP G F G +
Sbjct: 279 GFYPATRGNTAKCTSTGWIPAPRCTLKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYY 338
Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
C++ + + WS +P
Sbjct: 339 CDEHFE--TPSGSYWDHIHCTQDGWSPAVPCL 368
Score = 94.0 bits (233), Expect = 2e-22
Identities = 36/212 (16%), Positives = 65/212 (30%), Gaps = 25/212 (11%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
+ WS + + C V N ++C GY+
Sbjct: 477 GKDGWSAQPTCIK--SCDIPVFMNARTKNDFTWFKLNDTLDYECHDGYESNTGSTTGSIV 534
Query: 69 NGS-WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
G +P C C +P + ++ Y+VG +L+F+C
Sbjct: 535 CGYNGWSDLPICY------------ERECELPKIDVHLVPD--RKKDQYKVGEVLKFSCK 580
Query: 128 DRHHLLGEETIVCTETGRWSRAPPRCKA--RCEYPGEPQNGKIIP-LKFFYDPGDHIQVT 184
++G ++ C G P + C P E NG + K Y + ++
Sbjct: 581 PGFTIVGPNSVQCYHFGLSPDLPICKEQVQSCGPPPELLNGNVKEKTKEEYGHSEVVEYY 640
Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
CN ++ + + C DG W+
Sbjct: 641 CNPRFL----MKGPNKIQCV-DGEWTTLPVCI 667
Score = 92.1 bits (228), Expect = 9e-22
Identities = 41/219 (18%), Positives = 77/219 (35%), Gaps = 27/219 (12%)
Query: 4 PVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYR--GHAIFQCSWGYQLKGP 61
P G+ P+C + C + + + E+ + Y+ + C+ Y++ G
Sbjct: 950 PAIAKCLGEKWSHPPSCIKTDCLSLPSFENAIPMGEKKDVYKAGEQVTYTCATYYKMDGA 1009
Query: 62 PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAI 121
++ C N W+G C P N +++ Y G
Sbjct: 1010 SNVTCI-NSRWTGRPTCR-------------DTSCVNPPTVQNAYIVS-RQMSKYPSGER 1054
Query: 122 LQFACNDRHHLLGEETIVCTETGRWSRAPP--RCKARCEYPGEPQNGKIIPL-KFFYDPG 178
+++ C + + G+E ++C G W+ P +C P NG I Y P
Sbjct: 1055 VRYQCRSPYEMFGDEEVMCLN-GNWTEPPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPA 1113
Query: 179 DHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
++ C + Y + C+ +G WS + P C
Sbjct: 1114 SSVEYQCQNLYQ----LEGNKRITCR-NGQWS-EPPKCL 1146
Score = 90.2 bits (223), Expect = 5e-21
Identities = 38/209 (18%), Positives = 66/209 (31%), Gaps = 26/209 (12%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
S P C+ + C + + + + + Y ++C G+ + GP I
Sbjct: 901 KWSS--PPQCEGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPA-IAKCLG 957
Query: 70 GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR 129
WS P C C N + Y+ G + + C
Sbjct: 958 EKWSHP-PSCI------------KTDCLSLPSFENAIPM-GEKKDVYKAGEQVTYTCATY 1003
Query: 130 HHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDG 188
+ + G + C RW+ P C P QN I+ Y G+ ++ C
Sbjct: 1004 YKMDGASNVTCIN-SRWTGRPTCRDTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSP 1062
Query: 189 YVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
Y ++ C +G W+ + P C
Sbjct: 1063 Y----EMFGDEEVMCL-NGNWT-EPPQCK 1085
Score = 89.8 bits (222), Expect = 7e-21
Identities = 32/212 (15%), Positives = 64/212 (30%), Gaps = 23/212 (10%)
Query: 10 QGQWSGEVPTCQQIIC---PKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIV 65
S ++P C++ + P + N + + + + C+ + +KGP I
Sbjct: 595 HFGLSPDLPICKEQVQSCGPPPELLNGNVKEKTKEEYGHSEVVEYYCNPRFLMKGPNKIQ 654
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
C +G W+ C +G + PY G ++F
Sbjct: 655 CV-DGEWTTLPVCIVE-----------ESTCGDIPELEHGWAQ--LSSPPYYYGDSVEFN 700
Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTC 185
C++ ++G +I C G W++ P + N I+ +
Sbjct: 701 CSESFTMIGHRSITCIH-GVWTQLPQCVAIDKLKKCKSSNLIIL--EEHLKNKKEFDHNS 757
Query: 186 NDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
N Y +G W ++
Sbjct: 758 NIRYRCRGKEGWIH--TVCINGRWDPEVNCSM 787
Score = 88.3 bits (218), Expect = 2e-20
Identities = 40/213 (18%), Positives = 63/213 (29%), Gaps = 25/213 (11%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
++ W +P+C++ C + N + + + +QC G+ +
Sbjct: 234 TESGWR-PLPSCEEKSCDNPYIPNGDYSPLRIKHRTGDEITYQCRNGFYPATRGNTAKCT 292
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTG--GPYRVGAILQFAC 126
+ W A P C C P + G E+ P VG + C
Sbjct: 293 STGWIPA-PRCT------------LKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYC 339
Query: 127 NDRHHLLGEETIVCT--ETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
++ WS A P R Y +NG + G I V
Sbjct: 340 DEHFETPSGSYWDHIHCTQDGWSPAVPCL--RKCYFPYLENGYNQNHGRKFVQGKSIDVA 397
Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
C+ GY P T + WS P C
Sbjct: 398 CHPGYALPKAQTTV----TCMENGWS-PTPRCI 425
Score = 82.1 bits (202), Expect = 3e-18
Identities = 40/215 (18%), Positives = 65/215 (30%), Gaps = 30/215 (13%)
Query: 9 SQGQWSGE-VPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC 66
G+W+ V ++ C I +E+ + L Y F CS + + G I C
Sbjct: 656 VDGEWTTLPVCIVEESTCGDIPELEHGWAQLSSPPYYYGDSVEFNCSESFTMIGHRSITC 715
Query: 67 QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
+G W+ +P+C + N +
Sbjct: 716 I-HGVWTQ-LPQCV------------AIDKLKKCKSSNLI----ILEEHLKNKKEFDHNS 757
Query: 127 NDRHHLLGEE--TIVCTETGRWSRAPPRCKAR---CEYPGEPQNGKIIPLKFFYDPGDHI 181
N R+ G+E GRW A+ C P + N + Y G+ +
Sbjct: 758 NIRYRCRGKEGWIHTVCINGRWDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRDGEKV 817
Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
V C + Y+ I C+ DG W
Sbjct: 818 SVLCQENYL----IQEGEEITCK-DGRWQSIPLCV 847
Score = 70.5 bits (172), Expect = 2e-14
Identities = 32/153 (20%), Positives = 49/153 (32%), Gaps = 22/153 (14%)
Query: 11 GQWSGEVPTCQQII---CPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
G W+ E P C+ P ++N +T + +QC YQL+G I C
Sbjct: 1076 GNWT-EPPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITC 1134
Query: 67 QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI---EDPTGGPYRVGAILQ 123
+ NG WS P+C + N ++ R G ++
Sbjct: 1135 R-NGQWSEP-PKCL------------HPCVISREIMENYNIALRWTAKQKLYSRTGESVE 1180
Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKAR 156
F C + L + T P C R
Sbjct: 1181 FVCKRGYRLSSRSHTLRTTCWDGKLEYPTCAKR 1213
Score = 67.5 bits (164), Expect = 3e-13
Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 8/126 (6%)
Query: 96 CPVPALPLNGHLI-EDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAP-PRC 153
C N ++ + Y G + C + LG +VC + + P +C
Sbjct: 3 CNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNVIMVCRKGEWVALNPLRKC 62
Query: 154 KAR-CEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL 211
+ R C +PG+ G ++ G TCN+GY + W+
Sbjct: 63 QKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQ----LLGEINYRECDTDGWTN 118
Query: 212 DIPHCT 217
DIP C
Sbjct: 119 DIPICE 124
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi
domain, human complement system, complement second
component C2; 1.80A {Homo sapiens}
Length = 223
Score = 110 bits (277), Expect = 2e-30
Identities = 48/198 (24%), Positives = 65/198 (32%), Gaps = 19/198 (9%)
Query: 23 IICPKIV-VENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA 81
CP+ V + T + + C G P +C+ +G W +
Sbjct: 2 PSCPQNVNISGGTFT-LSHGWAPGSLLTYSCPQGLYP-SPASRLCKSSGQWQTPGATRSL 59
Query: 82 FFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT 141
PV CP P NG P G Y VG + F C D L G C
Sbjct: 60 SKAVC-----KPVRCPAPVSFENGIYT--PRLGSYPVGGNVSFECEDGFILRGSPVRQCR 112
Query: 142 ETGRWSRAPPRCKA---RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPT 198
G W C C PG +F + GD ++ C+ V +T +
Sbjct: 113 PNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGH--GDKVRYRCSSNLV----LTGS 166
Query: 199 SGPYCQSDGTWSLDIPHC 216
S CQ +G WS P C
Sbjct: 167 SERECQGNGVWSGTEPIC 184
Score = 110 bits (276), Expect = 4e-30
Identities = 39/181 (21%), Positives = 60/181 (33%), Gaps = 19/181 (10%)
Query: 13 WSGEVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS 71
S C+ + CP + EN T + G+ F+C G+ L+G P C+ NG
Sbjct: 57 RSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGM 116
Query: 72 WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH 131
W G C+ HCP P + L TG + G +++ C+
Sbjct: 117 WDGETAVCDN----------GAGHCPNPGISLGAVR----TGFRFGHGDKVRYRCSSNLV 162
Query: 132 LLGEETIVCTETGRWSRAPPRCKAR--CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
L G C G WS P C+ ++P + G
Sbjct: 163 LTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHML--GATNPTQKTKES 220
Query: 190 V 190
+
Sbjct: 221 L 221
Score = 79.6 bits (196), Expect = 2e-18
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 16/130 (12%)
Query: 96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWS-------R 148
CP G + G++L ++C + + +C +G+W
Sbjct: 4 CPQNVNISGGTFT---LSHGWAPGSLLTYSCPQGLYPSPA-SRLCKSSGQWQTPGATRSL 59
Query: 149 APPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG 207
+ CK RC P +NG P Y G ++ C DG++ + + C+ +G
Sbjct: 60 SKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFI----LRGSPVRQCRPNG 115
Query: 208 TWSLDIPHCT 217
W + C
Sbjct: 116 MWDGETAVCD 125
Score = 38.8 bits (90), Expect = 5e-04
Identities = 12/65 (18%), Positives = 18/65 (27%), Gaps = 6/65 (9%)
Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
C G + PG + +C G +P S C+S G W
Sbjct: 3 SCPQNVNISGGTFTLSHG-WAPGSLLTYSCPQGLY----PSPASR-LCKSSGQWQTPGAT 56
Query: 216 CTNYT 220
+
Sbjct: 57 RSLSK 61
>3sw0_X H factor 1, complement factor H; innate immune response, sushi
domains, cofactor in the inact of C3B, C3B, human
plasma, immune system; 1.80A {Homo sapiens}
Length = 188
Score = 109 bits (273), Expect = 4e-30
Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 25/200 (12%)
Query: 25 CPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAF 82
C V+N Y+ + + G + +QC Y++ G +++C +
Sbjct: 5 CVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCKD--- 61
Query: 83 FFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE 142
+ C P NG I Y + +++ C + + L G + I C
Sbjct: 62 ---------STGKCGPPPPIDNGD-ITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRN 111
Query: 143 TGRWSRAPPRCKARCEYPGEPQNGKI-----IPLKFFYDPGDHIQVTCNDGYVKPLDITP 197
G+WS P +N I K + G+ ++ C GY ++
Sbjct: 112 -GQWSEPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYR----LSS 166
Query: 198 TSGPYCQSDGTWSLDIPHCT 217
S + L+ P C
Sbjct: 167 RSHTLRTTCWDGKLEYPTCA 186
Score = 81.9 bits (202), Expect = 1e-19
Identities = 29/152 (19%), Positives = 45/152 (29%), Gaps = 20/152 (13%)
Query: 11 GQWSG-EVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQ 67
G W+ C ++N +T + +QC YQL+G I C+
Sbjct: 51 GNWTEPPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR 110
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHL---IEDPTGGPYRVGAILQF 124
NG WS P+C + N ++ R G ++F
Sbjct: 111 -NGQWSEP-PKCLH------------PCVISREIMENYNIALRWTAKQKLYSRTGESVEF 156
Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKAR 156
C + L + T P C R
Sbjct: 157 VCKRGYRLSSRSHTLRTTCWDGKLEYPTCAKR 188
Score = 78.1 bits (192), Expect = 3e-18
Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 9/126 (7%)
Query: 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR 152
C P N + I Y G +++ C + + G+E ++C +
Sbjct: 2 GTSCVNPPTVQNAY-IVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCK 60
Query: 153 CKAR-CEYPGEPQNGKIIPLKF-FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
C P NG I Y P ++ C + Y L+ +G WS
Sbjct: 61 DSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQ--LEGNKRI---TCRNGQWS 115
Query: 211 LDIPHC 216
+ P C
Sbjct: 116 -EPPKC 120
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen,
complement pathway, glycoprotein, immune response,
innate immunity, membrane; NMR {Homo sapiens}
Length = 1931
Score = 115 bits (288), Expect = 1e-29
Identities = 43/211 (20%), Positives = 71/211 (33%), Gaps = 18/211 (8%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQK 68
G WSG P C VEN L ++ + F+C G+ +KGP + CQ
Sbjct: 182 GIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQA 241
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
W +P C+ C P L+ + + G + ++C
Sbjct: 242 LNKWEPELPSCSR-------------VCQPPPDVLHAERTQ-RDKDNFSPGQEVFYSCEP 287
Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCND 187
+ L G ++ CT G WS A P C+ C+ + G + C++
Sbjct: 288 GYDLRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDE 347
Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
G+ + W+ +P C
Sbjct: 348 GFQLKGSSASYCVL-AGMESLWNSSVPVCEQ 377
Score = 114 bits (286), Expect = 2e-29
Identities = 43/210 (20%), Positives = 74/210 (35%), Gaps = 18/210 (8%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQK 68
G WSG P C VEN L ++ + F+C G+ +KGP + CQ
Sbjct: 632 GIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQA 691
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
W +P C+ C P L+ + + G + ++C
Sbjct: 692 LNKWEPELPSCSR-------------VCQPPPDVLHAERTQ-RDKDNFSPGQEVFYSCEP 737
Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCND 187
+ L G ++ CT G WS A P C+ C+ + G + C++
Sbjct: 738 GYDLRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDE 797
Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
G+ + + + + W+ +P C
Sbjct: 798 GF-QLKGSSASYCVLAGMESLWNSSVPVCE 826
Score = 113 bits (284), Expect = 3e-29
Identities = 60/223 (26%), Positives = 85/223 (38%), Gaps = 28/223 (12%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQC------SWGYQLKG 60
+ W+ VP C+QI CP + N T + Y + C + L G
Sbjct: 1717 MKALWNSSVPVCEQIFCPNPPAILNGRHTGTPFGDIPYGKEISYACDTHPDRGMTFNLIG 1776
Query: 61 PPDIVC----QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
I C Q NG WS P C P CP P NGH I Y
Sbjct: 1777 ESSIRCTSDPQGNGVWSSPAPRCELS---------VPAACPHPPKIQNGHYIG-GHVSLY 1826
Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKI-IPLKFF 174
G + + C+ + L+G+ I CT+ G WS+ CK C +P + +K
Sbjct: 1827 LPGMTISYICDPGYLLVGKGFIFCTDQGIWSQLDHYCKEVNCSFPLFMNGISKELEMKKV 1886
Query: 175 YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
Y GD++ + C DGY + + CQ+D W + CT
Sbjct: 1887 YHYGDYVTLKCEDGYT----LEGSPWSQCQADDRWDPPLAKCT 1925
Score = 109 bits (272), Expect = 2e-27
Identities = 49/224 (21%), Positives = 75/224 (33%), Gaps = 26/224 (11%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
+ +W E+P+C ++ P + + T Q+N G + + C GY L+G + C
Sbjct: 1141 ALNKWEPELPSCSRVCQPPPEILHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCT 1200
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
G WS P C C L + ++GA + F C+
Sbjct: 1201 PQGDWSPEAPRCA------------VKSCDDFLGQLPHGRV--LFPLNLQLGAKVSFVCD 1246
Query: 128 DRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIP-LKFFYDPGDHIQ 182
+ L G C G W+ + P C+ C P NG+ G I
Sbjct: 1247 EGFRLKGSSVSHCVLVGMRSLWNNSVPVCEHIFCPNPPAILNGRHTGTPSGDIPYGKEIS 1306
Query: 183 VTCNDGYVKPLDITPT--SGPYCQSDG----TWSLDIPHCTNYT 220
TC+ + + S C SD WS P C
Sbjct: 1307 YTCDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSV 1350
Score = 108 bits (271), Expect = 2e-27
Identities = 48/222 (21%), Positives = 77/222 (34%), Gaps = 30/222 (13%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWG------YQLKG 60
W E P C +I C + N + N + G + ++C+ G ++L G
Sbjct: 109 DTVIWDNETPICDRIPCGLPPTITNGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVG 168
Query: 61 PPDIVCQKN----GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
P I C N G WSG P+C + P NG L+ +
Sbjct: 169 EPSIYCTSNDDQVGIWSGPAPQCII------------PNKCTPPNVENGILVS-DNRSLF 215
Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKII-PLKFFY 175
+ +++F C + G + C +W P C C+ P + + + K +
Sbjct: 216 SLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNF 275
Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
PG + +C GY + C G WS P C
Sbjct: 276 SPGQEVFYSCEPGYDLRGAASMR----CTPQGDWSPAAPTCE 313
Score = 108 bits (271), Expect = 2e-27
Identities = 44/211 (20%), Positives = 72/211 (34%), Gaps = 18/211 (8%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVC 66
G WSG P C VEN L ++ + F+C G+ +KGP + C
Sbjct: 1080 QVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKC 1139
Query: 67 QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
Q W +P C+ V P P + H + G + ++C
Sbjct: 1140 QALNKWEPELPSCS------------RVCQPPPEILHGEHTP--SHQDNFSPGQEVFYSC 1185
Query: 127 NDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTC 185
+ L G ++ CT G WS PRC C+ + G + C
Sbjct: 1186 EPGYDLRGAASLHCTPQGDWSPEAPRCAVKSCDDFLGQLPHGRVLFPLNLQLGAKVSFVC 1245
Query: 186 NDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
++G+ + + + W+ +P C
Sbjct: 1246 DEGF-RLKGSSVSHCVLVGMRSLWNNSVPVC 1275
Score = 107 bits (268), Expect = 4e-27
Identities = 48/221 (21%), Positives = 77/221 (34%), Gaps = 26/221 (11%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRG-HAIFQCSWGYQLKGPPDIVCQ 67
+ +W E+P+C ++ P V + T +++N G + C GY L+G + C
Sbjct: 241 ALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCT 300
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
G WS A P C C L + ++GA + F C+
Sbjct: 301 PQGDWSPAAPTCE------------VKSCDDFMGQLLNGRV--LFPVNLQLGAKVDFVCD 346
Query: 128 DRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKII-PLKFFYDPGDHIQ 182
+ L G C G W+ + P C+ C P NG+ + G +
Sbjct: 347 EGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVN 406
Query: 183 VTCN------DGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
TC+ + + T Q +G WS P C
Sbjct: 407 YTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCG 447
Score = 106 bits (266), Expect = 8e-27
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 30/220 (13%)
Query: 11 GQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWG------YQLKGPP 62
WS + P CQ+I C P + +++ +N Y ++C+ G ++L G P
Sbjct: 1011 AHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEP 1070
Query: 63 DIVCQKN----GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
I C N G WSG P+C + P NG L+ + +
Sbjct: 1071 SIYCTSNDDQVGIWSGPAPQCI------------IPNKCTPPNVENGILVS-DNRSLFSL 1117
Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL-KFFYDP 177
+++F C + G + C +W P C C+ P E +G+ P + + P
Sbjct: 1118 NEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPEILHGEHTPSHQDNFSP 1177
Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
G + +C GY D+ + +C G WS + P C
Sbjct: 1178 GQEVFYSCEPGY----DLRGAASLHCTPQGDWSPEAPRCA 1213
Score = 106 bits (265), Expect = 1e-26
Identities = 49/220 (22%), Positives = 78/220 (35%), Gaps = 30/220 (13%)
Query: 11 GQWSGEVPTCQQIIC-PKIVVENPYLTLVEQNN-TYRGHAIFQCSWG------YQLKGPP 62
WS + P CQ+I C + N + N Y ++C+ G ++L G P
Sbjct: 561 AHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEP 620
Query: 63 DIVCQKN----GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
I C N G WSG P+C + P NG L+ + +
Sbjct: 621 SIYCTSNDDQVGIWSGPAPQCII------------PNKCTPPNVENGILVS-DNRSLFSL 667
Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL-KFFYDP 177
+++F C + G + C +W P C C+ P + + + K + P
Sbjct: 668 NEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNFSP 727
Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
G + +C GY + + C G WS P C
Sbjct: 728 GQEVFYSCEPGYD----LRGAASMRCTPQGDWSPAAPTCE 763
Score = 105 bits (263), Expect = 2e-26
Identities = 47/226 (20%), Positives = 76/226 (33%), Gaps = 26/226 (11%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
+ G+W ++P C ++ P + + TL Q+N G + + C Y L+G + C
Sbjct: 1594 TNGRWGPKLPHCSRVCQPPPEILHGEHTLSHQDNFSPGQEVFYSCEPSYDLRGAASLHCT 1653
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
G WS P C C L + ++GA + F C+
Sbjct: 1654 PQGDWSPEAPRC------------TVKSCDDFLGQLPHGRV--LLPLNLQLGAKVSFVCD 1699
Query: 128 DRHHLLGEETIVCTETG---RWSRAPPRCKAR-CEYPGEPQNGKIIPLKF-FYDPGDHIQ 182
+ L G C G W+ + P C+ C P NG+ F G I
Sbjct: 1700 EGFRLKGRSASHCVLAGMKALWNSSVPVCEQIFCPNPPAILNGRHTGTPFGDIPYGKEIS 1759
Query: 183 VTCNDGYVKPL------DITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
C+ + + + + Q +G WS P C
Sbjct: 1760 YACDTHPDRGMTFNLIGESSIRCTSDPQGNGVWSSPAPRCELSVPA 1805
Score = 103 bits (258), Expect = 1e-25
Identities = 45/223 (20%), Positives = 82/223 (36%), Gaps = 34/223 (15%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
W+G C++ C N + +++ + + C+ GY+L G C +
Sbjct: 49 SVWTGAKDRCRRKSCRNPPDPVNGMVHVIK-GIQFGSQIKYSCTKGYRLIGSSSATCIIS 107
Query: 70 GS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
G W P C + + C +P NG I + G+++ + C
Sbjct: 108 GDTVIWDNETPIC------------DRIPCGLPPTITNGDFIS-TNRENFHYGSVVTYRC 154
Query: 127 ND------RHHLLGEETIVCTE----TGRWSRAPPRCKAR-CEYPGEPQNGKII-PLKFF 174
N L+GE +I CT G WS P+C P +NG ++ +
Sbjct: 155 NPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSL 214
Query: 175 YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ + ++ C G+V + CQ+ W ++P C+
Sbjct: 215 FSLNEVVEFRCQPGFV----MKGPRRVKCQALNKWEPELPSCS 253
Score = 103 bits (257), Expect = 1e-25
Identities = 47/221 (21%), Positives = 76/221 (34%), Gaps = 26/221 (11%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
+ +W E+P+C ++ P V + T +++N G + + C GY L+G + C
Sbjct: 691 ALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCT 750
Query: 68 KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
G WS A P C C L + ++GA + F C+
Sbjct: 751 PQGDWSPAAPTC------------EVKSCDDFMGQLLNGRV--LFPVNLQLGAKVDFVCD 796
Query: 128 DRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFF-YDPGDHIQ 182
+ L G C G W+ + P C+ C P NG+ + G +
Sbjct: 797 EGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVN 856
Query: 183 VTCNDGYVKPLDITP------TSGPYCQSDGTWSLDIPHCT 217
TC+ + Q +G WS P C
Sbjct: 857 YTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCG 897
Score = 102 bits (256), Expect = 2e-25
Identities = 41/210 (19%), Positives = 67/210 (31%), Gaps = 18/210 (8%)
Query: 11 GQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
G WS P C V + + F+C G+ + G + CQ
Sbjct: 1535 GVWSSPPPRCISTNKCTAPEVENAIRVPGNRSFFSLTEIIRFRCQPGFVMVGSHTVQCQT 1594
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
NG W +P C+ V P P + H + + G + ++C
Sbjct: 1595 NGRWGPKLPHCS------------RVCQPPPEILHGEHTL--SHQDNFSPGQEVFYSCEP 1640
Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCND 187
+ L G ++ CT G WS PRC + C+ + L G + C++
Sbjct: 1641 SYDLRGAASLHCTPQGDWSPEAPRCTVKSCDDFLGQLPHGRVLLPLNLQLGAKVSFVCDE 1700
Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
G+ W+ +P C
Sbjct: 1701 GFRLKGRSASHC-VLAGMKALWNSSVPVCE 1729
Score = 100 bits (249), Expect = 2e-24
Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 30/220 (13%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWG------YQLKGPP 62
W + P C+ I C + N + + +QC G ++L G
Sbjct: 1464 VTWDKKAPICEIISCEPPPTISNGDFYSNNRTSFHNGTVVTYQCHTGPDGEQLFELVGER 1523
Query: 63 DIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
I C + G WS P C + N + + +
Sbjct: 1524 SIYCTSKDDQVGVWSSPPPRCI------------STNKCTAPEVENAIRV-PGNRSFFSL 1570
Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKII-PLKFFYDP 177
I++F C ++G T+ C GRW P C C+ P E +G+ + + P
Sbjct: 1571 TEIIRFRCQPGFVMVGSHTVQCQTNGRWGPKLPHCSRVCQPPPEILHGEHTLSHQDNFSP 1630
Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
G + +C Y + C G WS + P CT
Sbjct: 1631 GQEVFYSCEPSYDLRGAASLH----CTPQGDWSPEAPRCT 1666
Score = 96.0 bits (238), Expect = 5e-23
Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 26/221 (11%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
WS C++ C + V + + C+ G++L G C
Sbjct: 947 DNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGHSSAECIL 1006
Query: 69 NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN- 127
+G+ + + + C +P NG I + G+++ + CN
Sbjct: 1007 SGNTAHWSTKPPI---------CQRIPCGLPPTIANGDFIS-TNRENFHYGSVVTYRCNL 1056
Query: 128 -----DRHHLLGEETIVCT----ETGRWSRAPPRCKAR-CEYPGEPQNGKII-PLKFFYD 176
L+GE +I CT + G WS P+C P +NG ++ + +
Sbjct: 1057 GSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFS 1116
Query: 177 PGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ ++ C G+V + CQ+ W ++P C+
Sbjct: 1117 LNEVVEFRCQPGFV----MKGPRRVKCQALNKWEPELPSCS 1153
Score = 94.9 bits (235), Expect = 1e-22
Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 32/224 (14%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
WS C++ C + V + + C+ G++L G C
Sbjct: 497 DNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGHSSAECIL 556
Query: 69 NGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
+G+ WS P C + C +P NG I + G+++ +
Sbjct: 557 SGNAAHWSTKPPIC------------QRIPCGLPPTIANGDFIS-TNRENFHYGSVVTYR 603
Query: 126 CNDRH------HLLGEETIVCT----ETGRWSRAPPRCKA-RCEYPGEPQNGKII-PLKF 173
CN L+GE +I CT + G WS P+C P +NG ++ +
Sbjct: 604 CNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRS 663
Query: 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
+ + ++ C G+V + CQ+ W ++P C+
Sbjct: 664 LFSLNEVVEFRCQPGFV----MKGPRRVKCQALNKWEPELPSCS 703
Score = 94.5 bits (234), Expect = 2e-22
Identities = 50/226 (22%), Positives = 72/226 (31%), Gaps = 36/226 (15%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
QG WS PTC+ C + + ++ N G + F C G+QLKG C
Sbjct: 301 PQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDEGFQLKGSSASYCV 360
Query: 68 KNGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
G W+ ++P C + CP P + NG + G + +
Sbjct: 361 LAGMESLWNSSVPVC------------EQIFCPSPPVIPNGRHT-GKPLEVFPFGKAVNY 407
Query: 125 ACN------DRHHLLGEETIVCTET----GRWSRAPPRCKA----RCEYPGEPQNGKIIP 170
C+ L+GE TI CT G WS PRC + K
Sbjct: 408 TCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQT 467
Query: 171 LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
+ G ++ C Y C + WS C
Sbjct: 468 NASDFPIGTSLKYECRPEYY-----GRPFSITCLDNLVWSSPKDVC 508
Score = 94.1 bits (233), Expect = 2e-22
Identities = 53/230 (23%), Positives = 75/230 (32%), Gaps = 39/230 (16%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQ 67
QG WS E P C C + + P+ ++ N F C G++LKG C
Sbjct: 1201 PQGDWSPEAPRCAVKSCDDFLGQLPHGRVLFPLNLQLGAKVSFVCDEGFRLKGSSVSHCV 1260
Query: 68 KNGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
G W+ ++P C + CP P LNG P+ G G + +
Sbjct: 1261 LVGMRSLWNNSVPVC------------EHIFCPNPPAILNGRHTGTPS-GDIPYGKEISY 1307
Query: 125 ACNDRHH------LLGEETIVCTETGR----WSRAPPRCKARCEYP-------GEPQNGK 167
C+ L+GE TI CT WS PRC+ +
Sbjct: 1308 TCDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSVRAGHCKTPEQFPFASPT 1367
Query: 168 IIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
I F + G + C GY C + WS +C
Sbjct: 1368 IPINDFEFPVGTSLNYECRPGYF-----GKMFSISCLENLVWSSVEDNCR 1412
Score = 91.8 bits (227), Expect = 1e-21
Identities = 55/225 (24%), Positives = 77/225 (34%), Gaps = 33/225 (14%)
Query: 9 SQGQWSGEVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAI-FQCSW------GYQLKG 60
+ W+ VP C+QI CP V+ N T G A+ + C + L G
Sbjct: 814 MESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRGTSFDLIG 873
Query: 61 PPDIVC----QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
I C Q NG WS P C HC P L L +
Sbjct: 874 ESTIRCTSDPQGNGVWSSPAPRCGI-----------LGHCQAPDHFLFAKLKTQTNASDF 922
Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFFY 175
+G L++ C + +I C + WS CK + C+ P +P NG + +
Sbjct: 923 PIGTSLKYECRP-EYYGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVIT-DI 980
Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHCT 217
G I +C G+ + S C G WS P C
Sbjct: 981 QVGSRINYSCTTGH----RLIGHSSAECILSGNTAHWSTKPPICQ 1021
Score = 91.4 bits (226), Expect = 2e-21
Identities = 33/152 (21%), Positives = 43/152 (28%), Gaps = 18/152 (11%)
Query: 11 GQWSGEVPTCQQIIC-----PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIV 65
G WS P C+ + P + Y+ + C GY L G I
Sbjct: 1790 GVWSSPAPRCELSVPAACPHPPKIQNGHYIGGHVSLYLPGMTISYICDPGYLLVGKGFIF 1849
Query: 66 CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
C G WS C V+C P E Y G +
Sbjct: 1850 CTDQGIWSQLDHYCK------------EVNCSFPLFMNGIS-KELEMKKVYHYGDYVTLK 1896
Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKARC 157
C D + L G C RW +C +R
Sbjct: 1897 CEDGYTLEGSPWSQCQADDRWDPPLAKCTSRA 1928
Score = 90.2 bits (223), Expect = 4e-21
Identities = 46/219 (21%), Positives = 69/219 (31%), Gaps = 24/219 (10%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-------TYRGHAIFQCSWGYQLKGPP 62
W+ VP C+ I CP + N T + +Y + L G
Sbjct: 1266 SLWNNSVPVCEHIFCPNPPAILNGRHTGTPSGDIPYGKEISYTCDPHPDRGMTFNLIGES 1325
Query: 63 DIVCQKNGS----WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
I C + WS P C HC P + V
Sbjct: 1326 TIRCTSDPHGNGVWSSPAPRCELSVR--------AGHCKTPEQFPFASPTIPINDFEFPV 1377
Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFFYDP 177
G L + C + +I C E WS C+ + C P EP NG +
Sbjct: 1378 GTSLNYECRP-GYFGKMFSISCLENLVWSSVEDNCRRKSCGPPPEPFNGMVHINTDTQ-F 1435
Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
G + +CN+G+ + + T+ ++ TW P C
Sbjct: 1436 GSTVNYSCNEGF-RLIGSPSTTCLVSGNNVTWDKKAPIC 1473
Score = 88.3 bits (218), Expect = 2e-20
Identities = 46/215 (21%), Positives = 71/215 (33%), Gaps = 30/215 (13%)
Query: 9 SQGQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSW------GYQLKG 60
+ W+ VP C+QI C P ++ + + + + C + L G
Sbjct: 364 MESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRGTSFDLIG 423
Query: 61 PPDIVC----QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
I C Q NG WS P C HC P L L +
Sbjct: 424 ESTIRCTSDPQGNGVWSSPAPRCGI-----------LGHCQAPDHFLFAKLKTQTNASDF 472
Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFY 175
+G L++ C + +I C + WS CK C+ P +P NG + +
Sbjct: 473 PIGTSLKYECRP-EYYGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQ 531
Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
G I +C G+ + S C G +
Sbjct: 532 -VGSRINYSCTTGHR----LIGHSSAECILSGNAA 561
Score = 87.9 bits (217), Expect = 3e-20
Identities = 46/225 (20%), Positives = 74/225 (32%), Gaps = 34/225 (15%)
Query: 11 GQWSGEVPTCQQIIC-------PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD 63
G WS P C+ + + +P + + + ++C GY
Sbjct: 1337 GVWSSPAPRCELSVRAGHCKTPEQFPFASPTIPINDFEFPVGTSLNYECRPGY-FGKMFS 1395
Query: 64 IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
I C +N WS C C P P NG + + G+ +
Sbjct: 1396 ISCLENLVWSSVEDNCR------------RKSCGPPPEPFNGMVH---INTDTQFGSTVN 1440
Query: 124 FACNDRHHLLGEETIVCTETGR---WSRAPPRCKA-RCEYPGEPQNGKIIPL-KFFYDPG 178
++CN+ L+G + C +G W + P C+ CE P NG + + G
Sbjct: 1441 YSCNEGFRLIGSPSTTCLVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNNRTSFHNG 1500
Query: 179 DHIQVTCNDGYVKP--LDITPTSGPYCQSD----GTWSLDIPHCT 217
+ C+ G ++ YC S G WS P C
Sbjct: 1501 TVVTYQCHTGPDGEQLFELVGERSIYCTSKDDQVGVWSSPPPRCI 1545
Score = 83.7 bits (206), Expect = 7e-19
Identities = 45/203 (22%), Positives = 67/203 (33%), Gaps = 27/203 (13%)
Query: 26 PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFF 85
+ P E + ++C GY + I+C KN W+GA C
Sbjct: 6 EWLPFARPTNLTDEFEFPIGTYLNYECRPGYSGRPF-SIICLKNSVWTGAKDRC------ 58
Query: 86 FFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG- 144
C P P+NG + + G+ ++++C + L+G + C +G
Sbjct: 59 ------RRKSCRNPPDPVNGMVH---VIKGIQFGSQIKYSCTKGYRLIGSSSATCIISGD 109
Query: 145 --RWSRAPPRCKAR-CEYPGEPQNGKIIPLKF-FYDPGDHIQVTCNDGYVKPLDITPTSG 200
W P C C P NG I + G + CN G
Sbjct: 110 TVIWDNETPICDRIPCGLPPTITNGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGE 169
Query: 201 P--YCQSD----GTWSLDIPHCT 217
P YC S+ G WS P C
Sbjct: 170 PSIYCTSNDDQVGIWSGPAPQCI 192
Score = 72.5 bits (177), Expect = 6e-15
Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 10/127 (7%)
Query: 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
C P + +G L + C + +I+C + W+ A RC+
Sbjct: 1 QCNAPEWLPFARPTNLTDEFEFPIGTYLNYECRPGYSGRP-FSIICLKNSVWTGAKDRCR 59
Query: 155 AR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWS 210
+ C P +P NG + +K G I+ +C GY L + ++ C G W
Sbjct: 60 RKSCRNPPDPVNGMVHVIKGIQ-FGSQIKYSCTKGYR--LIGSSSA--TCIISGDTVIWD 114
Query: 211 LDIPHCT 217
+ P C
Sbjct: 115 NETPICD 121
>2uwn_A H factor 1, human complement factor H; alternative splicing,
sucrose octasulphate, AGE-related macular degeneration,
complement alternate pathway; HET: SCR; 2.35A {Homo
sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Length = 187
Score = 97.3 bits (242), Expect = 2e-25
Identities = 39/179 (21%), Positives = 62/179 (34%), Gaps = 26/179 (14%)
Query: 43 TYRGHAIFQCSWGYQLKGPPD---IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVP 99
+ + C ++ I C ++G WS A+P C P
Sbjct: 29 AVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPAVPCL--------------RKCYFP 73
Query: 100 ALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR--C 157
L NG+ G + G + AC+ + L +T V WS P + +
Sbjct: 74 YLE-NGYNQ--NHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRVKTCS 130
Query: 158 EYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
+ + +NG I ++ Y + + C GYV D + C DG WS P C
Sbjct: 131 KSSIDIENGFISESQYTYALKEKAKYQCKLGYV-TADGETSGSITCGKDG-WS-AQPTC 186
Score = 78.8 bits (194), Expect = 2e-18
Identities = 29/144 (20%), Positives = 42/144 (29%), Gaps = 20/144 (13%)
Query: 13 WSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSW 72
WS VP ++ C +EN Y + C GY L V W
Sbjct: 60 WSPAVPCLRK--CYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGW 117
Query: 73 SGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHL 132
S C ++ + I + Y + ++ C +
Sbjct: 118 SPTPRCI------------RVKTCSKSSIDIENGFIS-ESQYTYALKEKAKYQCKLGYVT 164
Query: 133 LGEET---IVCTETGRWSRAPPRC 153
ET I C + G WS A P C
Sbjct: 165 ADGETSGSITCGKDG-WS-AQPTC 186
Score = 41.8 bits (98), Expect = 4e-05
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 9 SQGQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGP---PD 63
+ WS + C I +EN +++ + + A +QC GY
Sbjct: 113 MENGWSPTPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGS 172
Query: 64 IVCQKNGSWSGAIPEC 79
I C K+G WS P C
Sbjct: 173 ITCGKDG-WSA-QPTC 186
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_A
Length = 155
Score = 95.0 bits (236), Expect = 5e-25
Identities = 27/163 (16%), Positives = 54/163 (33%), Gaps = 27/163 (16%)
Query: 19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD------IVCQKNGS 71
+ CP++ + + + ++ + C GY++ I C K+G+
Sbjct: 2 SMTGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGT 61
Query: 72 WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH 131
WS IP C V C P +G + + ++++C + ++
Sbjct: 62 WSNKIPTCK------------IVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYY 109
Query: 132 LL---GEETIVCTETGRWS-----RAPPRCKARCEYPGEPQNG 166
+ C+ G W R+ P C C P +
Sbjct: 110 KMLNNNTGIYTCSAQGVWMNKVLGRSLPTCLPVCGLPKFSRKL 152
Score = 85.4 bits (211), Expect = 2e-21
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 12/134 (8%)
Query: 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRW 146
CP P++G + +P+ Y + +C+ + +L + I C + G W
Sbjct: 5 GNECPELQPPVHGKI--EPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTW 62
Query: 147 SRAPPRCKA-RCEYPGEPQNGKII--PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYC 203
S P CK C PGE ++G I I+ +C + Y K + T C
Sbjct: 63 SNKIPTCKIVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYK-MLNNNTGIYTC 121
Query: 204 QSDGTWSLDIPHCT 217
+ G W + +
Sbjct: 122 SAQGVWMNKVLGRS 135
Score = 57.7 bits (139), Expect = 6e-11
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN--TYRGHAIFQCSWGYQL---KGPP 62
G WS ++PTC+ + C +E+ +T +NN TY+ + C Y
Sbjct: 58 KDGTWSNKIPTCKIVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYKMLNNNTG 117
Query: 63 DIVCQKNGSWSGAIPEC 79
C G W +
Sbjct: 118 IYTCSAQGVWMNKVLGR 134
Score = 57.3 bits (138), Expect = 8e-11
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 153 CKAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGPYCQSDGTW 209
C P +GKI P + Y D + V+C+ GY +K T C DGTW
Sbjct: 3 MTGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTW 62
Query: 210 SLDIPHCT 217
S IP C
Sbjct: 63 SNKIPTCK 70
>1h03_P Complement decay-accelerating factor; immune system protein,
enteroviral receptor, bacterial receptor, ligand for
CD97, complement pathway; 1.7A {Homo sapiens} SCOP:
g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P
1h04_P 2qzd_A
Length = 125
Score = 89.9 bits (223), Expect = 3e-23
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 20/121 (16%)
Query: 41 NNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNAFFFFFFFFFFNPVHCP 97
+ F C+ GY+L G C +GS WS +PEC ++CP
Sbjct: 19 GILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC------------REIYCP 66
Query: 98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAPPRCK 154
P NG + Y + +ACN ++GE +I CT + G WS PP C+
Sbjct: 67 APPQIDNGII--QGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECR 124
Query: 155 A 155
Sbjct: 125 G 125
Score = 87.2 bits (216), Expect = 3e-22
Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 14/128 (10%)
Query: 96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPR 152
CP P NG + G GA + F+CN + L G + C +G +WS P
Sbjct: 3 CPNPGEIRNGQID---VPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPE 59
Query: 153 CKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ---SDGT 208
C+ C P + NG I + Y + CN G+ + + YC +G
Sbjct: 60 CREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFT--MIGEHSI--YCTVNNDEGE 115
Query: 209 WSLDIPHC 216
WS P C
Sbjct: 116 WSGPPPEC 123
Score = 63.7 bits (155), Expect = 2e-13
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
S QWS +P C++I CP ++N + + YR + C+ G+ + G I C
Sbjct: 49 SSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCT 108
Query: 68 KN---GSWSGAIPECNA 81
N G WSG PEC
Sbjct: 109 VNNDEGEWSGPPPECRG 125
Score = 42.1 bits (99), Expect = 2e-05
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLD 212
C PGE +NG+I G I +CN GY + ++ +C G+ WS
Sbjct: 2 SCPNPGEIRNGQIDVPGGIL-FGATISFSCNTGYK----LFGSTSSFCLISGSSVQWSDP 56
Query: 213 IPHCT 217
+P C
Sbjct: 57 LPECR 61
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo
sapiens} SCOP: g.18.1.1 g.18.1.1
Length = 128
Score = 88.7 bits (220), Expect = 6e-23
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
HC P L L T + +G L++ C ++ +I C + WS C
Sbjct: 4 AHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRP-FSITCLDNLVWSSPKDVC 62
Query: 154 KAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---W 209
K + C+ P +P NG + + G I +C G+ L ++ C G W
Sbjct: 63 KRKSCKTPPDPVNGMVHVITDIQ-VGSRITYSCTTGHR--LIGHSSA--ECILSGNTAHW 117
Query: 210 SLDIPHCT 217
S P C
Sbjct: 118 STKPPICQ 125
Score = 79.9 bits (197), Expect = 2e-19
Identities = 26/133 (19%), Positives = 42/133 (31%), Gaps = 19/133 (14%)
Query: 26 PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFF 85
+ + ++C Y + I C N WS C
Sbjct: 10 DHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFS-ITCLDNLVWSSPKDVC------ 62
Query: 86 FFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG- 144
C P P+NG + +VG+ + ++C H L+G + C +G
Sbjct: 63 ------KRKSCKTPPDPVNGMVH---VITDIQVGSRITYSCTTGHRLIGHSSAECILSGN 113
Query: 145 --RWSRAPPRCKA 155
WS PP C+
Sbjct: 114 TAHWSTKPPICQR 126
Score = 57.1 bits (138), Expect = 6e-11
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
WS C++ C N + V + + C+ G++L G C +
Sbjct: 53 LVWSSPKDVCKRKSCKTPPDPVNGMVH-VITDIQVGSRITYSCTTGHRLIGHSSAECILS 111
Query: 70 GS---WSGAIPEC 79
G+ WS P C
Sbjct: 112 GNTAHWSTKPPIC 124
Score = 49.0 bits (117), Expect = 6e-08
Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 9/68 (13%)
Query: 153 CKARCEYPGEPQNGKIIPL--KFFYDPGDHIQVTCNDGYV-KPLDITPTSGPYCQSDGTW 209
+A C+ P K+ + G ++ C Y +P IT C + W
Sbjct: 2 AEAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFSIT------CLDNLVW 55
Query: 210 SLDIPHCT 217
S C
Sbjct: 56 SSPKDVCK 63
Score = 26.3 bits (58), Expect = 4.7
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 9 SQGQWSGEVPTCQQI 23
+ WS + P CQ+I
Sbjct: 113 NTAHWSTKPPICQRI 127
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of
comple activation, short consensus repeat, viral
receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1
g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Length = 130
Score = 87.6 bits (217), Expect = 2e-22
Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 17/140 (12%)
Query: 22 QIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC----QKNGSWSGAI 76
+ C + N ++ + CS ++L G ++C + +G+W
Sbjct: 1 EASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA 60
Query: 77 PECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE 136
P+C F CP P +P + PYR G + FAC + G +
Sbjct: 61 PKCEYFN--------KYSSCPEPIVPGGYKI---RGSTPYRHGDSVTFACKTNFSMNGNK 109
Query: 137 TIVCTETGRWSRAP-PRCKA 155
++ C W P C +
Sbjct: 110 SVWCQANNMWGPTRLPTCVS 129
Score = 83.4 bits (206), Expect = 9e-21
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 17/134 (12%)
Query: 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRA 149
C P LNG + P VG +++++C+ L+GE++++C G W +
Sbjct: 2 ASCGSPPPILNGRI--SYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 59
Query: 150 PPRCKA-----RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ 204
P+C+ C P P G I Y GD + C + + +CQ
Sbjct: 60 APKCEYFNKYSSCPEPIVP-GGYKIRGSTPYRHGDSVTFACKTNFS----MNGNKSVWCQ 114
Query: 205 SDGTWSL-DIPHCT 217
++ W +P C
Sbjct: 115 ANNMWGPTRLPTCV 128
Score = 61.8 bits (150), Expect = 1e-12
Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Query: 11 GQWSGEVPTCQQI----ICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC 66
G W P C+ CP+ +V Y + F C + + G + C
Sbjct: 54 GTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWC 113
Query: 67 QKNGSWSGA-IPEC 79
Q N W +P C
Sbjct: 114 QANNMWGPTRLPTC 127
Score = 47.6 bits (113), Expect = 2e-07
Identities = 15/64 (23%), Positives = 24/64 (37%)
Query: 154 KARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDI 213
+A C P NG+I G I+ +C+ + + + + DGTW
Sbjct: 1 EASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA 60
Query: 214 PHCT 217
P C
Sbjct: 61 PKCE 64
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain,
regulator of C activation, C3D, immune system; 1.52A
{Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A
3kzj_A 2xqw_C
Length = 129
Score = 82.7 bits (204), Expect = 2e-20
Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 11/130 (8%)
Query: 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR 152
C P NG I Y + +++ C + + L G + I C G+WS P
Sbjct: 4 FGKCGPPPPIDNGD-ITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRN-GQWSEPPKC 61
Query: 153 CKARCEYPGEPQNGKII-----PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG 207
+N I K + G+ ++ C GY ++ S +
Sbjct: 62 LHPCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYR----LSSRSHTLRTTCW 117
Query: 208 TWSLDIPHCT 217
L+ P C
Sbjct: 118 DGKLEYPTCA 127
Score = 67.3 bits (164), Expect = 1e-14
Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 17/141 (12%)
Query: 20 CQQIICPK-IVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIP 77
+ C ++N +T + +QC YQL+G I C+ NG WS P
Sbjct: 2 AEFGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWSEP-P 59
Query: 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIE--DPTGGPYRVGAILQFACNDRHHLLGE 135
+C P + + R G ++F C + L
Sbjct: 60 KCLH-----------PCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYRLSSR 108
Query: 136 ETIVCTETGRWSRAPPRCKAR 156
+ T P C R
Sbjct: 109 SHTLRTTCWDGKLEYPTCAKR 129
Score = 49.6 bits (118), Expect = 4e-08
Identities = 14/74 (18%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Query: 11 GQWSGEVPTCQQIICPKIVVENPYLTL-----VEQNNTYRGHAIFQCSWGYQLKGPPDIV 65
GQWS + + ++EN + L + + F C GY+L +
Sbjct: 53 GQWSEPPKCLHPCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYRLSSRSHTL 112
Query: 66 CQKNGSWSGAIPEC 79
P C
Sbjct: 113 RTTCWDGKLEYPTC 126
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR
{Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Length = 136
Score = 81.1 bits (200), Expect = 7e-20
Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 28/148 (18%)
Query: 20 CQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGA 75
+ C N + V + + C+ G++L G C +G+ WS
Sbjct: 2 AEAKSCKTPPDPVNGMVH-VITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60
Query: 76 IPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN------DR 129
P C + C +P NG I + G+++ + CN
Sbjct: 61 PPIC------------QRIPCGLPPTIANGDFI-STNRENFHYGSVVTYRCNLGSRGRKV 107
Query: 130 HHLLGEETIVCTE----TGRWSRAPPRC 153
L+GE +I CT G WS P+C
Sbjct: 108 FELVGEPSIYCTSNDDQVGIWSGPAPQC 135
Score = 80.0 bits (197), Expect = 2e-19
Identities = 35/135 (25%), Positives = 50/135 (37%), Gaps = 14/135 (10%)
Query: 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRA 149
C P P+NG + +VG+ + ++C H L+G + C +G WS
Sbjct: 4 AKSCKTPPDPVNGMVH---VITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60
Query: 150 PPRCKA-RCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPT--SGPYCQS 205
PP C+ C P NG I + + G + CN G YC S
Sbjct: 61 PPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTS 120
Query: 206 D----GTWSLDIPHC 216
+ G WS P C
Sbjct: 121 NDDQVGIWSGPAPQC 135
Score = 53.8 bits (129), Expect = 1e-09
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWG------YQLKG 60
+ WS + P CQ+I C + N + N + G + ++C+ G ++L G
Sbjct: 53 NTAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVG 112
Query: 61 PPDIVCQKN----GSWSGAIPEC 79
P I C N G WSG P+C
Sbjct: 113 EPSIYCTSNDDQVGIWSGPAPQC 135
Score = 41.4 bits (97), Expect = 3e-05
Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 9/69 (13%)
Query: 153 CKAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT--- 208
+A+ C+ P +P NG + + G I +C G+ + S C G
Sbjct: 2 AEAKSCKTPPDPVNGMVHVITDIQ-VGSRITYSCTTGH----RLIGHSSAECILSGNTAH 56
Query: 209 WSLDIPHCT 217
WS P C
Sbjct: 57 WSTKPPICQ 65
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system;
NMR {Homo sapiens}
Length = 133
Score = 80.3 bits (198), Expect = 1e-19
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 10/129 (7%)
Query: 94 VHCPVPALPLNGHLIE-DPTGGPYRVGAILQFACNDRHHLL-GEETIVCTETGRWSRAPP 151
++C P ++ T ++ G L++ C + +T+ C G W
Sbjct: 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYNTF 60
Query: 152 RCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT--- 208
RC +PGE +NG++ G I+ +C++G+ L + TS C+
Sbjct: 61 CIYKRCRHPGELRNGQVEIKTDLS-FGSQIEFSCSEGFF--LIGSTTS--RCEVQDRGVG 115
Query: 209 WSLDIPHCT 217
WS +P C
Sbjct: 116 WSHPLPQCE 124
Score = 73.8 bits (181), Expect = 3e-17
Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 21/131 (16%)
Query: 36 TLVEQNNTYRGHAIFQCSWGYQLKGPPD-IVCQKNGSWSGAIPECNAFFFFFFFFFFNPV 94
TL E + C GY + C +G W C
Sbjct: 18 TLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYN-TFC------------IYK 64
Query: 95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPP 151
C P NG + G+ ++F+C++ L+G T C R WS P
Sbjct: 65 RCRHPGELRNGQVE---IKTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLP 121
Query: 152 RCKA-RCEYPG 161
+C+ +
Sbjct: 122 QCEILEHHHHH 132
Score = 49.9 bits (119), Expect = 3e-08
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 11 GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
G+W C C + N + ++ + ++ F CS G+ L G C+
Sbjct: 53 GEWVYN-TFCIYKRCRHPGELRNGQVE-IKTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQ 110
Query: 70 GS---WSGAIPEC 79
WS +P+C
Sbjct: 111 DRGVGWSHPLPQC 123
Score = 28.7 bits (64), Expect = 0.73
Identities = 4/18 (22%), Positives = 7/18 (38%)
Query: 9 SQGQWSGEVPTCQQIICP 26
WS +P C+ +
Sbjct: 112 RGVGWSHPLPQCEILEHH 129
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
Length = 159
Score = 81.0 bits (199), Expect = 1e-19
Identities = 37/163 (22%), Positives = 55/163 (33%), Gaps = 32/163 (19%)
Query: 25 CPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD------IVCQKNGSWSGAIPE 78
PK + E + ++ +R + I C GYQL VCQ +G+W A+P
Sbjct: 7 QPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPR 66
Query: 79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL----- 133
C C P NG T G A +Q+ C++ ++ +
Sbjct: 67 CK------------IKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAG 114
Query: 134 ----GEETIVCTETGRWSRAP-----PRCKARCEYPGEPQNGK 167
+ CT G W PRC C P P +
Sbjct: 115 SRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKPVNPVEQR 157
Score = 74.8 bits (183), Expect = 3e-17
Identities = 29/139 (20%), Positives = 43/139 (30%), Gaps = 15/139 (10%)
Query: 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRW 146
CP P +I+ Y+ C + L+ T VC + G W
Sbjct: 2 TQACPQPKTLDEFTIIQ-NLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTW 60
Query: 147 SRAPPRCKARCE-YPGEPQNGKI--IPLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGP 201
RA PRCK + P NG IQ C++ Y ++ + S
Sbjct: 61 HRAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQ 120
Query: 202 ---YCQSDGTWSLDIPHCT 217
C + G W +
Sbjct: 121 GVYTCTAQGIWKNEQKGEK 139
Score = 45.5 bits (107), Expect = 2e-06
Identities = 20/115 (17%), Positives = 28/115 (24%), Gaps = 30/115 (26%)
Query: 9 SQGQWSGEVPTCQQIICPKI-VVENPYLTLV--EQNNTYRGHAIFQCSWGY--------- 56
G W +P C+ C + + N NTY+ + C Y
Sbjct: 56 DDGTWHRAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGS 115
Query: 57 QLKGPPDIVCQKNGSWSG-----AIPECNAFFFFFFFFFFNPVHCPVPALPLNGH 106
+ C G W IP C C P P+
Sbjct: 116 RESEQGVYTCTAQGIWKNEQKGEKIPRCLP-------------VCGKPVNPVEQR 157
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex,
innate IMMU system, blood, membrane, cytolysin, immune
SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens}
PDB: 4a5w_B* 4e0s_B*
Length = 913
Score = 79.2 bits (194), Expect = 3e-17
Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 10/164 (6%)
Query: 56 YQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGP 115
Q + + + NG I + CP P P NG +
Sbjct: 585 RQEEDCTFSIMENNGQPC--INDDEEMKEVDLPEIEADSGCPQPVPPENGFI--RNEKQL 640
Query: 116 YRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYPGEPQNGKIIPLKFF 174
Y VG ++ +C +G + C G W + C + C P + I P +
Sbjct: 641 YLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQRL 700
Query: 175 YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
Y G+ I++TC G+V + S CQ +W+ I +
Sbjct: 701 YRIGESIELTCPKGFV----VAGPSRYTCQ-GNSWTPPISNSLT 739
>2yby_A Complement factor H; immune system, complement regulation, innate
immunity, infec; 1.58A {Mus musculus}
Length = 124
Score = 73.8 bits (181), Expect = 3e-17
Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 15/129 (11%)
Query: 95 HCPVPALPLNGHLIEDPT---GGPYRVGAILQFACND---RHHLLGEETIVCTETGRWSR 148
C P G L + + P +G + C++ + + CT G W
Sbjct: 4 PCEFPQFK-YGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEP 61
Query: 149 APPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT 208
P C +C + +NG + Y G ++V C +GY L + C +G
Sbjct: 62 EVP-CVRKCVFH-YVENGDSAYWEKVYVQGQSLKVQCYNGYS--LQNGQDT-MTCTENG- 115
Query: 209 WSLDIPHCT 217
WS P C
Sbjct: 116 WS-PPPKCI 123
Score = 41.8 bits (98), Expect = 2e-05
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 9 SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLK-GPPDIVCQ 67
+ W E C + C VEN E+ QC GY L+ G + C
Sbjct: 55 TAQGWEPE-VPCVRK-CVFHYVENGDSAYWEKVYVQGQSLKVQCYNGYSLQNGQDTMTCT 112
Query: 68 KNGSWSGAIPEC 79
+NG WS P+C
Sbjct: 113 ENG-WSPP-PKC 122
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple
domains protein 1, CSMD1, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 73
Score = 69.4 bits (170), Expect = 4e-16
Identities = 22/86 (25%), Positives = 28/86 (32%), Gaps = 16/86 (18%)
Query: 72 WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH 131
SG+ E C P +P G TG + G L F C
Sbjct: 2 SSGSSGEIE------------KGGCGDPGIPAYGKR----TGSSFLHGDTLTFECPAAFE 45
Query: 132 LLGEETIVCTETGRWSRAPPRCKARC 157
L+GE I C + +WS P C
Sbjct: 46 LVGERVITCQQNNQWSGNKPSCSGPS 71
Score = 61.3 bits (149), Expect = 5e-13
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 13 WSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS 71
SG ++ C + T + + F+C ++L G I CQ+N
Sbjct: 2 SSGSSGEIEKGGCGDPGIPAYGKRT--GSSFLHGDTLTFECPAAFELVGERVITCQQNNQ 59
Query: 72 WSGAIPEC 79
WSG P C
Sbjct: 60 WSGNKPSC 67
Score = 55.6 bits (134), Expect = 6e-11
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Query: 146 WSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ 204
S + + C PG P GK F + GD + C + + CQ
Sbjct: 2 SSGSSGEIEKGGCGDPGIPAYGKRTGSSFLH--GDTLTFECPAAFE----LVGERVITCQ 55
Query: 205 SDGTWSLDIPHCT 217
+ WS + P C+
Sbjct: 56 QNNQWSGNKPSCS 68
Score = 29.0 bits (65), Expect = 0.31
Identities = 6/15 (40%), Positives = 7/15 (46%)
Query: 11 GQWSGEVPTCQQIIC 25
QWSG P+C
Sbjct: 58 NQWSGNKPSCSGPSS 72
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold,
antibody, immune system; NMR {Homo sapiens}
Length = 376
Score = 71.5 bits (174), Expect = 8e-15
Identities = 34/188 (18%), Positives = 57/188 (30%), Gaps = 17/188 (9%)
Query: 23 IICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC----QKNGSWSGAIP 77
I C + N ++ + CS ++L G ++C + +G+W P
Sbjct: 2 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 61
Query: 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEET 137
+C F CP P +P + PYR G + FAC + G ++
Sbjct: 62 KCEY--------FNKYSSCPEPIVPGGYKI---RGSTPYRHGDSVTFACKTNFSMNGNKS 110
Query: 138 IVCTETGRWSR-APPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDIT 196
+ C W P C + G + L P D C + +
Sbjct: 111 VWCQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVF 170
Query: 197 PTSGPYCQ 204
Sbjct: 171 IFPPKPKD 178
Score = 50.3 bits (119), Expect = 1e-07
Identities = 33/216 (15%), Positives = 51/216 (23%), Gaps = 33/216 (15%)
Query: 11 GQWSGEVPTCQQI----ICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC 66
G W P C+ CP+ +V Y + F C + + G + C
Sbjct: 54 GTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWC 113
Query: 67 QKNGSWSG-AIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
Q N W +P C V ++ G P G
Sbjct: 114 QANNMWGPTRLPTC------------VSVFPLEGSIEGRGGSELADPEVPRDCGCKPCIC 161
Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTC 185
PP+ K P+ ++ DP
Sbjct: 162 TVPEVS-------------SVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFV 208
Query: 186 NDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTD 221
+D V T Q + T+ + D
Sbjct: 209 DDVEVHT---AQTQPREEQFNSTFRSVSELPIMHQD 241
Score = 41.9 bits (97), Expect = 8e-05
Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 8/64 (12%)
Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYC----QSDGTWSLD 212
C P NG+I G I+ +C+ + + C + DGTW
Sbjct: 4 CGSPPPILNGRISYYSTPIAVGTVIRYSCSGTF----RLIGEKSLLCITKDKVDGTWDKP 59
Query: 213 IPHC 216
P C
Sbjct: 60 APKC 63
Score = 27.6 bits (60), Expect = 3.3
Identities = 26/224 (11%), Positives = 54/224 (24%), Gaps = 24/224 (10%)
Query: 9 SQGQWSG-EVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKG-----PP 62
+ W +PTC + + +E + + R C PP
Sbjct: 115 ANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPP 174
Query: 63 DIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVP-ALPLNGHLIEDPTGGPYRVGAI 121
+ + + E+ +R +
Sbjct: 175 KPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSE 234
Query: 122 LQFACNDRHHLLGEETIVCTETGRWSRAP-PRCKARCEYPGEPQNGKIIPLKFFYDPGDH 180
L D + + C AP + ++ + + IP D
Sbjct: 235 LPIMHQDWLN---GKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDK 291
Query: 181 IQVTCNDGYVKPLDITP-------------TSGPYCQSDGTWSL 211
+ +TC P DIT + P ++ ++ +
Sbjct: 292 VSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFV 335
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain,
SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 74
Score = 59.4 bits (144), Expect = 2e-12
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR 152
C NG + GA + + C+ + ++G +T+ C WS PP
Sbjct: 5 SSGCSDLPEIQNGWKT--TSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPF 62
Query: 153 CKA-RCEYP 160
C+ P
Sbjct: 63 CEKTEESGP 71
Score = 53.6 bits (129), Expect = 3e-10
Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 153 CKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLD 212
+ C E QNG G I C+ GY + + T CQ D +WS D
Sbjct: 4 GSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYD--IVGSDTL--TCQWDLSWSSD 59
Query: 213 IPHC 216
P C
Sbjct: 60 PPFC 63
Score = 50.9 bits (122), Expect = 4e-09
Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 14 SGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWS 73
S C + +N + T +QC GY + G + CQ + SWS
Sbjct: 2 SSGSSGCSDLPEI----QNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWS 57
Query: 74 GAIPEC 79
P C
Sbjct: 58 SDPPFC 63
Score = 30.9 bits (70), Expect = 0.058
Identities = 4/18 (22%), Positives = 7/18 (38%)
Query: 9 SQGQWSGEVPTCQQIICP 26
WS + P C++
Sbjct: 52 WDLSWSSDPPFCEKTEES 69
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 61.3 bits (149), Expect = 2e-11
Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 26/159 (16%)
Query: 25 CPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD------IVCQKNGSWSGAIP 77
CP + N +++ V+ + C GY+L VCQK+GSW +P
Sbjct: 17 CPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMP 76
Query: 78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GE 135
C + V C P +G + G A++Q++C + + + +
Sbjct: 77 AC------------SIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVND 124
Query: 136 ETIVCTETGRW-----SRAPPRCKARCEYPGEPQNGKII 169
VC G W ++ P C+ C G+I
Sbjct: 125 GKYVCEADGFWTSSKGEKSLPVCEPVCGLSARTTGGQIY 163
Score = 59.0 bits (143), Expect = 1e-10
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGPYCQSDGTWSLDI 213
C YP P NG + P++ Y D + C GY ++ + CQ DG+W +
Sbjct: 16 ACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPM 75
Query: 214 PHC 216
P C
Sbjct: 76 PAC 78
Score = 53.2 bits (128), Expect = 1e-08
Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 13/127 (10%)
Query: 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRW 146
CP P P NGH+ P Y + C + LL T VC + G W
Sbjct: 14 AHACPYPMAPPNGHV--SPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSW 71
Query: 147 SRAPPRCKAR-CEYPGEPQNGKIIPLKFF--YDPGDHIQVTCNDGYVKPLDITPTSGPYC 203
R P C C P + +G++ + IQ +C + + C
Sbjct: 72 DRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYT--MKVNDGKYVC 129
Query: 204 QSDGTWS 210
++DG W+
Sbjct: 130 EADGFWT 136
Score = 32.4 bits (74), Expect = 0.10
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 10/81 (12%)
Query: 11 GQWSGEVPTCQQIIC-PKIVVENPYLTLV--EQNNTYRGHAIFQC-SWGYQLKGPPDI-V 65
G W +P C + C P + + + + TY+ + C Y +K V
Sbjct: 69 GSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYV 128
Query: 66 CQKNGSWSGA-----IPECNA 81
C+ +G W+ + +P C
Sbjct: 129 CEADGFWTSSKGEKSLPVCEP 149
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 86
Score = 55.8 bits (134), Expect = 7e-11
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETGRWS--- 147
V C P +G + G A++Q++C + + + + VC G W+
Sbjct: 5 IVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSK 64
Query: 148 --RAPPRCKARCEYPGEPQNGK 167
++ P C+ C G+
Sbjct: 65 GEKSLPVCEPVCGLSARTTGGR 86
Score = 36.5 bits (84), Expect = 6e-04
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Query: 153 CKA-RCEYPGEPQNGKIIPLKF--FYDPGDHIQVTCNDGYVKPLDITPTSGPY-CQSDGT 208
C P + +G++ + IQ +C + + + G Y C +DG
Sbjct: 3 MTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYT---MKVNDGKYVCDADGF 59
Query: 209 WSLDIPHCT 217
W+ +
Sbjct: 60 WTSSKGEKS 68
Score = 34.2 bits (78), Expect = 0.006
Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 23/97 (23%)
Query: 19 TCQQIICPKI-VVENPYLTLVEQNN--TYRGHAIFQCSWGYQLKGPPD--IVCQKNGSWS 73
+ + C + + + + TY+ + C + D VC +G W+
Sbjct: 2 SMTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWT 61
Query: 74 GA-----IPECNAFFFFFFFFFFNPVHCPVPALPLNG 105
+ +P C PV C + A G
Sbjct: 62 SSKGEKSLPVC------------EPV-CGLSARTTGG 85
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 52.9 bits (127), Expect = 2e-08
Identities = 30/131 (22%), Positives = 43/131 (32%), Gaps = 15/131 (11%)
Query: 94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRWS 147
+ CP P +I++ Y+ C + L+ T VC + G W
Sbjct: 1 IKCPQPKTLDEFTIIQNLQPQ-YQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWH 59
Query: 148 RAPPRCKAR-CEYPGEPQNGKI--IPLKFFYDPGDHIQVTCNDGYVK-----PLDITPTS 199
RA PRCK + C P NG IQ C++ Y K +
Sbjct: 60 RAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQG 119
Query: 200 GPYCQSDGTWS 210
C + G W
Sbjct: 120 VYTCTAQGIWK 130
Score = 52.1 bits (125), Expect = 3e-08
Identities = 37/163 (22%), Positives = 54/163 (33%), Gaps = 32/163 (19%)
Query: 25 CPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD------IVCQKNGSWSGAIPE 78
PK + E + ++ +R + I C GYQL VCQ +G+W A+P
Sbjct: 5 QPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPR 64
Query: 79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE-- 136
C C P NG T G A +Q+ C++ ++ +
Sbjct: 65 C------------KIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAG 112
Query: 137 -------TIVCTETGRWSRAP-----PRCKARCEYPGEPQNGK 167
CT G W PRC C P P +
Sbjct: 113 SRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKPVNPVEQR 155
Score = 51.7 bits (124), Expect = 4e-08
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 156 RCEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGPYCQSDGTWSLD 212
+C P II L+ Y D+ TC GY ++ + + CQ DGTW
Sbjct: 2 KCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRA 61
Query: 213 IPHC 216
+P C
Sbjct: 62 MPRC 65
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting,
mannan-binding protein, complement, ficolins complement
pathway, mannose- binding lectin; HET: NAG BMA MAN;
4.20A {Homo sapiens}
Length = 361
Score = 51.5 bits (123), Expect = 5e-08
Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 9/91 (9%)
Query: 85 FFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGE------ETI 138
+ + CP P++G + P+ Y + +C+ + +L + I
Sbjct: 271 WRLSYRAAGNECPELQPPVHGKIE--PSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQI 328
Query: 139 VCTETGRWSRAPPRCKAR-CEYPGEPQNGKI 168
C + G WS P CK + E ++ ++
Sbjct: 329 ECLKDGTWSNKIPTCKKNEIDLESELKSEQV 359
Score = 45.0 bits (106), Expect = 7e-06
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPY--CQSDGTWSLDIP 214
C P +GKI P + Y D + V+C+ GY D C DGTWS IP
Sbjct: 282 CPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIP 341
Query: 215 HC 216
C
Sbjct: 342 TC 343
Score = 39.2 bits (91), Expect = 6e-04
Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 18/71 (25%)
Query: 41 NNTYRGHAIFQCSWGYQLKG------PPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV 94
++ + C GY++ I C K+G+WS IP C
Sbjct: 299 KYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKK------------N 346
Query: 95 HCPVPALPLNG 105
+ + +
Sbjct: 347 EIDLESELKSE 357
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B)
receptor, CIS-trans isomerization, CCP module, sushi
domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB:
1ss2_A
Length = 68
Score = 44.7 bits (105), Expect = 5e-07
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 96 CPVPALPL-NGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
C L L NG + P GA ++F C+ HL+G VC++ G+WS P C+
Sbjct: 8 CSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCSQ-GQWSTPKPHCQ 66
Query: 155 A 155
Sbjct: 67 V 67
Score = 32.4 bits (73), Expect = 0.014
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 50 FQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA 81
F+C + L G VC + G WS P C
Sbjct: 37 FRCDPDFHLVGSSRSVCSQ-GQWSTPKPHCQV 67
Score = 27.8 bits (61), Expect = 0.67
Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 8/68 (11%)
Query: 152 RCKARCEYP-GEPQNGKII--PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT 208
C +NGK+ G ++ C+ + + +S C G
Sbjct: 3 EFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDF----HLVGSSRSVCS-QGQ 57
Query: 209 WSLDIPHC 216
WS PHC
Sbjct: 58 WSTPKPHC 65
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas
testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A*
1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A*
3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A
3ov4_A* 3nm2_A
Length = 125
Score = 28.1 bits (62), Expect = 1.2
Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 23/90 (25%)
Query: 108 IEDPTGGPYRVG--AILQF----ACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPG 161
+E+P G R G AI +F L +E + EY G
Sbjct: 36 VENPVGSEPRSGTAAIREFYANSLKLPLAVELTQEVRAVANEAAF-----AFIVSFEYQG 90
Query: 162 EPQ------------NGKIIPLKFFYDPGD 179
GK++ ++ + +
Sbjct: 91 RKTVVAPIDHFRFNGAGKVVSMRALFGEKN 120
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate
repeat-containing protein, structural genomics, NPPSFA;
NMR {Homo sapiens} PDB: 2kea_A
Length = 73
Score = 27.0 bits (60), Expect = 1.4
Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 22/73 (30%)
Query: 146 WSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTC--NDG--------------- 188
S R + ++ P + + LK GD I + G
Sbjct: 5 SSGFCGRARVHTDFTPSPYDTDSLKLK----KGDIIDIISKPPMGTWMGLLNNKVGTFKF 60
Query: 189 -YVKPLDITPTSG 200
YV L P+SG
Sbjct: 61 IYVDVLSSGPSSG 73
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding
site, complex with ethylamine, COMP protein, lectin
pathway of complement; 1.45A {Rattus norvegicus} PDB:
3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Length = 115
Score = 26.9 bits (60), Expect = 2.7
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 155 ARCEYPGEPQNGKIIPLKF--FYDPGDHIQVTCNDGYVKPLDITPTSGPYC 203
+ C Y + + G ++ L+F +D DH +V C Y+K + GP+C
Sbjct: 29 SECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCPYDYIKIKAGSKVWGPFC 79
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether
formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces
lasaliensis}
Length = 283
Score = 27.5 bits (60), Expect = 3.6
Identities = 13/91 (14%), Positives = 20/91 (21%), Gaps = 20/91 (21%)
Query: 108 IEDPTGGPYRVG--AILQF---ACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGE 162
+ DP G VG A+ A H G P
Sbjct: 37 LVDPLGTEPVVGRAALAARLAPALRGAVHEE-PGRPYAAHDGTSVVLPATVTVGAPGAPP 95
Query: 163 PQ--------------NGKIIPLKFFYDPGD 179
+ +G I ++ + D
Sbjct: 96 QRRGRTRVMGVIEVGEDGLIREMRVMWGVTD 126
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein;
NMR {Saccharomyces cerevisiae}
Length = 73
Score = 25.0 bits (55), Expect = 8.0
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 6/42 (14%)
Query: 149 APPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVT--CNDG 188
A +A Y EP+N + L GD + ++ G
Sbjct: 2 AIVNQRAVALYDFEPENDNELRLA----EGDIVFISYKHGQG 39
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, signaling protein; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 69
Score = 24.5 bits (54), Expect = 9.1
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 23/71 (32%)
Query: 147 SRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDG-----------------Y 189
S A Y L F G+ I VT DG Y
Sbjct: 5 SSGGEEYIALYPYSSVEPG----DLTF--TEGEEILVTQKDGEWWTGSIGDRSGIFPSNY 58
Query: 190 VKPLDITPTSG 200
VKP D P+SG
Sbjct: 59 VKPKDSGPSSG 69
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller,
transcription repressor, three malignant brain TU
repeats, transcription; HET: MES; 1.55A {Homo sapiens}
SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A*
3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A*
3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A*
2ri2_A* 2ri5_A*
Length = 331
Score = 26.2 bits (57), Expect = 9.9
Identities = 14/59 (23%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Query: 49 IFQCSW----GYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPL 103
I W G L P D N W + E A + F P H + + L
Sbjct: 201 IHPVGWCQKQGKPLTPPQDYPDPDNFCWEKYLEETGASAVPTWAFKVRPPHSFLVNMKL 259
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.143 0.502
Gapped
Lambda K H
0.267 0.0563 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,782,854
Number of extensions: 223832
Number of successful extensions: 1447
Number of sequences better than 10.0: 1
Number of HSP's gapped: 665
Number of HSP's successfully gapped: 209
Length of query: 222
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 132
Effective length of database: 4,188,903
Effective search space: 552935196
Effective search space used: 552935196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.3 bits)