Query psy14532
Match_columns 258
No_of_seqs 199 out of 1638
Neff 11.8
Searched_HMMs 29240
Date Fri Aug 16 22:17:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14532.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14532hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rik_A Titin; I-SET IG fold, p 100.0 2.4E-35 8.1E-40 222.9 25.7 230 1-251 4-238 (284)
2 2yd9_A Receptor-type tyrosine- 100.0 1.6E-34 5.6E-39 220.4 21.1 228 1-250 5-250 (304)
3 3b43_A Titin; I-SET IG fold, e 100.0 7.7E-34 2.6E-38 234.1 23.1 229 2-251 197-430 (570)
4 2wim_A N-CAM 2, NCAM2, neural 100.0 2.6E-33 8.8E-38 212.4 23.4 232 1-252 3-241 (291)
5 1qz1_A Neural cell adhesion mo 100.0 1.2E-33 4.2E-38 214.1 21.1 233 1-250 1-241 (291)
6 3b43_A Titin; I-SET IG fold, e 100.0 6.9E-33 2.4E-37 228.4 23.7 225 2-247 290-519 (570)
7 3laf_A Deleted in colorectal c 100.0 4.5E-33 1.5E-37 220.3 19.6 231 2-252 121-359 (403)
8 3kld_A Contactin 4, axcam, BIG 100.0 1.4E-31 4.9E-36 210.5 18.3 229 2-252 5-342 (384)
9 2o26_X MAST/stem cell growth f 100.0 5.4E-31 1.8E-35 199.6 19.7 210 2-246 12-230 (290)
10 3laf_A Deleted in colorectal c 100.0 3.7E-30 1.3E-34 203.6 24.0 229 3-250 22-266 (403)
11 2y25_A Myomesin; structural pr 100.0 5.9E-32 2E-36 207.3 12.8 226 2-251 7-268 (317)
12 3dmk_A DOWN syndrome cell adhe 100.0 5.2E-30 1.8E-34 219.6 26.0 236 2-250 429-665 (816)
13 3ejj_X Macrophage colony-stimu 100.0 9.3E-31 3.2E-35 198.1 18.9 220 2-249 4-231 (289)
14 3rjd_A High affinity immunoglo 100.0 3.8E-30 1.3E-34 192.0 21.3 209 2-249 1-219 (262)
15 1e07_A Carcinoembryonic antige 100.0 8.4E-30 2.9E-34 212.9 25.6 241 5-250 2-248 (642)
16 3o4o_C Interleukin-1 receptor 100.0 1.9E-31 6.5E-36 206.4 14.1 227 2-248 18-273 (339)
17 3qs7_E FL cytokine receptor; i 100.0 8.9E-31 3E-35 207.8 17.3 220 4-249 50-272 (423)
18 1e07_A Carcinoembryonic antige 100.0 1.6E-29 5.6E-34 211.2 24.4 214 6-250 385-604 (642)
19 3p3y_A Neurofascin; IG domains 100.0 8.6E-30 2.9E-34 201.6 20.6 230 2-250 16-267 (404)
20 2wng_A Tyrosine-protein phosph 100.0 5E-30 1.7E-34 197.5 17.5 235 3-249 4-266 (327)
21 1bih_A Hemolin; insect immunit 100.0 6.3E-30 2.1E-34 201.8 18.3 228 1-249 5-256 (395)
22 2ec8_A MAST/stem cell growth f 100.0 3.1E-30 1.1E-34 210.7 17.1 223 2-246 211-447 (524)
23 4dep_C Interleukin-1 receptor 100.0 6.4E-30 2.2E-34 198.6 18.0 225 9-248 14-273 (349)
24 3p3y_A Neurofascin; IG domains 100.0 5.6E-30 1.9E-34 202.6 17.2 221 8-250 122-357 (404)
25 3oq3_B IFN-alpha/beta binding 100.0 5.1E-30 1.7E-34 197.6 16.5 216 7-246 34-273 (329)
26 2v5m_A Dscam; neurobiology SPL 100.0 6.3E-30 2.1E-34 201.4 17.2 231 2-251 103-353 (388)
27 2iep_A Muscle-specific kinase 100.0 9.8E-30 3.3E-34 181.1 16.5 185 2-205 7-192 (192)
28 3qs7_E FL cytokine receptor; i 100.0 9.4E-30 3.2E-34 202.0 17.5 210 13-250 150-371 (423)
29 4fqp_A Poliovirus receptor; im 100.0 9.1E-30 3.1E-34 194.9 16.7 242 5-249 3-262 (313)
30 1itb_B Type 1 interleukin-1 re 100.0 1.5E-30 5.3E-35 199.3 11.9 221 9-250 12-254 (315)
31 4dkd_C Macrophage colony-stimu 100.0 1.5E-30 5E-35 197.3 11.0 218 2-248 4-230 (292)
32 2yd1_A Tyrosine-protein phosph 100.0 1.2E-28 4E-33 178.4 20.2 190 1-206 5-203 (212)
33 2v5m_A Dscam; neurobiology SPL 100.0 3.4E-29 1.2E-33 197.2 18.2 222 2-244 3-251 (388)
34 3qs9_E FL cytokine receptor; i 100.0 2E-29 6.9E-34 205.0 17.2 212 8-246 233-448 (527)
35 2ec8_A MAST/stem cell growth f 100.0 3.5E-29 1.2E-33 204.5 18.7 210 1-245 35-252 (524)
36 1cs6_A Axonin-1; neural cell a 100.0 1.5E-29 5E-34 198.9 15.8 226 2-248 4-250 (382)
37 1cs6_A Axonin-1; neural cell a 100.0 1.9E-29 6.5E-34 198.3 15.9 220 9-251 108-340 (382)
38 3vh8_G Killer cell immunoglobu 100.0 1.4E-28 4.6E-33 188.6 20.1 219 2-248 24-260 (316)
39 1bih_A Hemolin; insect immunit 100.0 3E-29 1E-33 197.9 16.6 226 8-249 106-353 (395)
40 1ry7_B FGFR-3, fibroblast grow 100.0 1.3E-30 4.4E-35 201.4 8.5 216 8-249 14-270 (334)
41 3dmk_A DOWN syndrome cell adhe 100.0 1.2E-28 4.1E-33 211.1 21.1 218 2-251 343-572 (816)
42 2yd6_A PTPRD protein; hydrolas 100.0 2E-28 6.9E-33 177.1 18.1 187 2-206 6-207 (212)
43 3r4d_A CEA-related cell adhesi 100.0 5.7E-28 1.9E-32 174.2 19.8 198 5-207 2-204 (208)
44 3qs9_E FL cytokine receptor; i 100.0 1.2E-28 4.2E-33 200.4 16.5 211 13-251 150-372 (527)
45 1wio_A CD4, T-cell surface gly 100.0 8.8E-29 3E-33 193.2 14.9 193 12-250 106-328 (363)
46 2v9r_A Roundabout homolog 1; p 100.0 1.6E-28 5.4E-33 177.5 15.2 194 2-211 9-210 (212)
47 2c5d_C AXL oncogene, tyrosine- 100.0 1.9E-27 6.5E-32 169.8 19.3 188 1-201 1-191 (195)
48 3u83_A Poliovirus receptor-rel 100.0 1.3E-28 4.6E-33 189.8 14.3 237 3-249 15-277 (331)
49 2nzi_A Titin; IG-domain, FNIII 100.0 4.6E-27 1.6E-31 179.2 22.4 189 1-207 3-201 (305)
50 2y23_A Myomesin; structural pr 100.0 5E-28 1.7E-32 185.0 17.1 217 9-250 8-267 (312)
51 2j8h_A Titin, connectin; cardi 100.0 8.4E-28 2.9E-32 171.8 17.1 182 1-202 3-196 (197)
52 2rcj_C Light chain; immunoglob 100.0 1.9E-27 6.6E-32 194.2 21.3 234 2-250 114-368 (523)
53 2a38_A Titin; Z1Z2, structural 100.0 1.2E-27 4.1E-32 170.6 17.6 182 2-201 5-193 (194)
54 2v5t_A NCAM2, N-CAM 2, neural 100.0 1.7E-27 5.7E-32 169.1 17.1 182 1-202 1-187 (189)
55 1z7z_I Intercellular adhesion 100.0 4.8E-28 1.6E-32 194.3 15.5 214 4-248 1-234 (450)
56 3lcy_A Titin; A-BAND, IG tande 100.0 2.3E-27 7.8E-32 169.4 17.3 182 2-202 7-195 (197)
57 4fom_A Poliovirus receptor-rel 100.0 3.2E-28 1.1E-32 185.9 12.8 235 10-249 7-257 (308)
58 1wio_A CD4, T-cell surface gly 100.0 2.3E-28 7.7E-33 190.9 12.0 211 11-248 3-224 (363)
59 1epf_A NCAM, protein (neural c 100.0 3.9E-27 1.3E-31 167.6 16.9 174 1-190 1-179 (191)
60 2vr9_A Roundabout 1, ROBO; imm 100.0 7E-27 2.4E-31 169.6 18.4 184 1-202 8-206 (217)
61 2v44_A NCAM2, neural cell adhe 100.0 8.4E-27 2.9E-31 165.6 18.3 179 4-201 4-187 (189)
62 3k0w_A Mucosa-associated lymph 100.0 5.9E-27 2E-31 170.1 17.8 172 2-206 18-205 (218)
63 1fnl_A Low affinity immunoglob 100.0 4.9E-27 1.7E-31 164.7 16.8 166 2-203 7-174 (175)
64 2wv3_A Neuroplastin; igcam, me 100.0 1.7E-26 5.7E-31 164.2 19.7 174 2-202 3-189 (190)
65 2jll_A NCAM2, neural cell adhe 100.0 1.9E-26 6.5E-31 181.6 21.9 224 2-244 1-239 (389)
66 1qgc_4 Protein (immunoglobulin 100.0 2.9E-27 9.8E-32 189.1 17.3 234 2-248 116-388 (438)
67 2rcj_C Light chain; immunoglob 100.0 5.8E-27 2E-31 191.3 19.4 230 2-249 219-471 (523)
68 2oz4_A Intercellular adhesion 100.0 5.5E-27 1.9E-31 175.3 17.8 198 11-244 12-224 (265)
69 3mjg_X Beta-type platelet-deri 100.0 3.8E-27 1.3E-31 178.3 17.0 213 3-246 1-222 (289)
70 2va4_A NCAM2, N-CAM 2, neural 100.0 6.5E-27 2.2E-31 166.5 17.2 179 1-201 1-191 (192)
71 3sgj_C Human FCG3A receptor; r 100.0 3E-27 1E-31 169.7 15.6 170 2-207 7-178 (204)
72 1rhf_A Tyrosine-protein kinase 100.0 1.2E-26 4.2E-31 163.7 18.3 178 2-201 2-181 (182)
73 1f2q_A High affinity immunoglo 100.0 3.1E-27 1.1E-31 165.9 14.5 169 2-206 4-174 (176)
74 2ocw_A Polymeric-immunoglobuli 99.9 1.1E-25 3.6E-30 186.3 23.2 228 2-244 112-376 (585)
75 1qgc_4 Protein (immunoglobulin 99.9 2.9E-26 9.8E-31 183.3 18.6 230 4-246 3-263 (438)
76 2wqr_A IG epsilon chain C regi 99.9 9.9E-27 3.4E-31 178.8 14.9 233 2-249 7-265 (323)
77 2d3v_A Leukocyte immunoglobuli 99.9 1.5E-26 5.2E-31 165.2 14.8 178 2-201 5-195 (196)
78 4fa8_A Secreted protein BARF1; 99.9 6.3E-27 2.2E-31 167.4 12.0 176 11-191 2-191 (203)
79 3p2t_A Leukocyte immunoglobuli 99.9 3E-26 1E-30 163.7 15.4 179 2-202 5-195 (196)
80 1ugn_A LIR1, leukocyte immunog 99.9 3.7E-26 1.3E-30 163.4 15.8 179 2-202 5-197 (198)
81 1f97_A Junction adhesion molec 99.9 6.8E-26 2.3E-30 163.7 17.3 192 2-203 1-207 (212)
82 1za6_B IGG heavy chain; immuno 99.9 1.9E-26 6.5E-31 178.7 14.8 237 7-249 5-288 (344)
83 3ojm_B Fibroblast growth facto 99.9 9.6E-26 3.3E-30 165.0 17.5 188 2-208 15-226 (231)
84 2ocw_A Polymeric-immunoglobuli 99.9 3.5E-25 1.2E-29 183.2 22.6 225 6-244 4-259 (585)
85 2rik_A Titin; I-SET IG fold, p 99.9 2.4E-25 8.2E-30 168.0 19.4 181 2-202 98-283 (284)
86 3ry4_A Low affinity immunoglob 99.9 8.4E-26 2.9E-30 157.6 15.6 164 2-201 4-169 (170)
87 3kld_A Contactin 4, axcam, BIG 99.9 8.4E-26 2.9E-30 177.6 17.2 169 9-202 212-382 (384)
88 1igt_B IGG2A intact antibody - 99.9 6.1E-26 2.1E-30 181.7 16.3 229 3-248 124-391 (444)
89 3grw_A Fibroblast growth facto 99.9 1.3E-25 4.5E-30 165.4 16.8 182 9-209 22-224 (241)
90 1z7z_I Intercellular adhesion 99.9 2.5E-25 8.4E-30 178.5 19.5 215 2-246 85-320 (450)
91 1oll_A NK receptor; immune sys 99.9 1.5E-25 5.2E-30 158.9 16.1 178 2-202 4-187 (188)
92 2gi7_A GPVI protein; IG-like d 99.9 1.3E-25 4.6E-30 158.6 15.6 168 2-201 8-183 (184)
93 1uct_A Immunoglobulin alpha FC 99.9 7.6E-26 2.6E-30 164.0 13.9 182 2-205 9-200 (218)
94 3rbs_A Myomesin-1; immunoglobu 99.9 8.9E-26 3E-30 162.2 14.1 178 2-200 3-204 (207)
95 2wim_A N-CAM 2, NCAM2, neural 99.9 2.7E-25 9.4E-30 168.2 17.3 184 2-205 98-286 (291)
96 1b6u_A KIR2DL3, P58 killer cel 99.9 3.1E-25 1.1E-29 164.3 16.7 220 2-245 7-242 (257)
97 1qz1_A Neural cell adhesion mo 99.9 3.6E-25 1.2E-29 167.5 17.0 182 2-203 100-290 (291)
98 2yd9_A Receptor-type tyrosine- 99.9 5.3E-25 1.8E-29 167.8 17.4 183 3-207 109-295 (304)
99 3s97_C Contactin-1; carbonic a 99.9 3.9E-25 1.3E-29 158.3 15.6 178 5-202 11-200 (201)
100 1hzh_H IGG, immunoglobulin hea 99.9 5.4E-25 1.8E-29 176.9 18.1 236 7-249 5-297 (457)
101 3jz7_A MCAR, CAR, coxsackievir 99.9 2.5E-25 8.4E-30 160.9 14.6 195 5-204 3-213 (214)
102 1igt_B IGG2A intact antibody - 99.9 4.7E-25 1.6E-29 176.6 17.6 238 6-249 4-288 (444)
103 1nbq_A JAM, junctional adhesio 99.9 1.7E-25 5.7E-30 161.3 12.9 191 2-202 4-208 (209)
104 1vca_A VCAM-D1,2, human vascul 99.9 6.1E-25 2.1E-29 157.4 15.3 179 5-206 3-200 (202)
105 1igy_B IGG1 intact antibody MA 99.9 3.2E-26 1.1E-30 182.9 8.9 230 2-248 119-381 (434)
106 3v2a_R Vascular endothelial gr 99.9 5.6E-26 1.9E-30 193.5 10.3 219 11-243 233-462 (772)
107 2ifg_A High affinity nerve gro 99.9 1.2E-25 4.1E-30 174.4 9.7 179 2-205 158-347 (347)
108 2fbo_J V1V2;, variable region- 99.9 4.4E-24 1.5E-28 158.1 17.6 191 5-197 5-244 (250)
109 3bp6_B Programmed cell death 1 99.9 1.3E-24 4.5E-29 155.8 14.0 181 5-203 5-193 (202)
110 2r15_A Myomesin-1; sarcomeric 99.9 2.1E-24 7.3E-29 155.8 14.6 168 16-203 16-210 (212)
111 1p6f_A NKP46, natural cytotoxi 99.9 5.1E-24 1.8E-28 156.5 16.2 181 2-205 7-193 (242)
112 2x1w_L Vascular endothelial gr 99.9 5.5E-24 1.9E-28 153.9 15.5 177 8-207 13-211 (213)
113 1hzh_H IGG, immunoglobulin hea 99.9 2.3E-24 7.9E-29 173.2 14.8 231 2-249 132-401 (457)
114 1nkr_A P58-CL42 KIR; inhibitor 99.9 1.6E-23 5.6E-28 150.0 17.0 178 2-201 8-200 (201)
115 3oq3_B IFN-alpha/beta binding 99.9 1.7E-23 5.7E-28 161.2 18.2 178 2-201 128-328 (329)
116 3v2a_R Vascular endothelial gr 99.9 5.1E-24 1.7E-28 181.5 16.8 219 8-249 132-374 (772)
117 1igy_B IGG1 intact antibody MA 99.9 5.5E-25 1.9E-29 175.7 10.2 234 7-248 4-277 (434)
118 1iga_A IGA1; immunoglobulin; N 99.9 1.6E-23 5.6E-28 169.0 18.8 219 15-249 139-396 (475)
119 1ry7_B FGFR-3, fibroblast grow 99.9 8.5E-24 2.9E-28 163.1 16.4 176 11-205 132-329 (334)
120 4frw_A Poliovirus receptor-rel 99.9 1.1E-23 3.7E-28 152.5 15.6 192 7-201 4-209 (218)
121 1iga_A IGA1; immunoglobulin; N 99.9 3E-23 1E-27 167.5 19.2 235 5-246 4-289 (475)
122 3mj6_A Junctional adhesion mol 99.9 1.3E-23 4.5E-28 157.1 15.9 211 3-221 6-256 (268)
123 2ny1_B T-cell surface glycopro 99.9 4.6E-24 1.6E-28 150.7 12.6 173 11-206 4-182 (184)
124 2o26_X MAST/stem cell growth f 99.9 7.2E-24 2.5E-28 160.4 13.8 181 2-205 91-290 (290)
125 3mj8_L Stimulatory hamster ant 99.9 2E-23 6.7E-28 150.9 14.8 178 3-190 2-201 (213)
126 4f80_A Butyrophilin subfamily 99.9 2.8E-23 9.5E-28 151.6 15.2 187 10-203 12-213 (226)
127 1hng_A CD2; T lymphocyte adhes 99.9 5.2E-24 1.8E-28 149.2 10.8 159 10-191 4-165 (176)
128 3sbw_C Programmed cell death 1 99.9 7.6E-23 2.6E-27 148.7 17.0 192 6-206 5-214 (222)
129 3d9a_L Light chain of hyhel10 99.9 8.8E-23 3E-27 147.5 17.2 178 4-190 3-201 (213)
130 1itb_B Type 1 interleukin-1 re 99.9 5E-23 1.7E-27 157.5 16.4 170 11-202 112-313 (315)
131 1jbj_A CD3 epsilon and gamma e 99.9 5.9E-24 2E-28 150.4 9.9 143 12-191 9-178 (186)
132 3nl4_L Antigen binding fragmen 99.9 1.3E-22 4.5E-27 146.6 17.0 175 3-186 2-198 (213)
133 2pet_A Lutheran blood group gl 99.9 2.3E-23 7.8E-28 152.4 13.0 175 6-188 4-211 (231)
134 1sy6_A T-cell surface glycopro 99.9 2.4E-23 8E-28 149.3 12.8 155 14-202 15-203 (204)
135 2y25_A Myomesin; structural pr 99.9 8.2E-24 2.8E-28 162.0 10.8 174 10-203 106-315 (317)
136 2y23_A Myomesin; structural pr 99.9 3.3E-23 1.1E-27 158.2 14.1 180 2-201 106-310 (312)
137 4i0k_A CD276 antigen; immunogl 99.9 1.2E-23 4.2E-28 153.0 11.1 187 10-207 3-210 (222)
138 4fqp_A Poliovirus receptor; im 99.9 5.6E-23 1.9E-27 157.2 14.9 185 2-205 117-306 (313)
139 3uzq_A Anti-dengue MAB 4E11; d 99.9 1.5E-22 5.2E-27 150.1 16.7 199 4-207 3-248 (253)
140 3ejj_X Macrophage colony-stimu 99.9 2.6E-22 9E-27 151.6 17.7 179 5-205 92-283 (289)
141 3pv7_A B7-H6, IG-like domain-c 99.9 1.3E-23 4.6E-28 155.4 10.3 194 3-201 3-224 (248)
142 1lk3_L 9D7 light chain; antige 99.9 3.6E-22 1.2E-26 144.0 17.4 176 5-190 4-200 (210)
143 2zg1_A Sialic acid-binding IG- 99.9 7.9E-22 2.7E-26 142.6 18.8 176 6-190 4-201 (214)
144 3b5h_A Cervical EMMPRIN, HAB18 99.9 4.6E-22 1.6E-26 140.4 17.0 161 12-202 8-182 (184)
145 3r06_A Anti-mouse CD3epsilon a 99.9 5.9E-22 2E-26 143.2 18.0 181 3-190 2-201 (213)
146 3rjd_A High affinity immunoglo 99.9 4.1E-22 1.4E-26 148.5 17.0 165 5-201 85-260 (262)
147 2if7_A SLAM family member 6; N 99.9 2.1E-22 7E-27 143.3 14.5 172 8-191 4-181 (193)
148 3auv_A SC-DSFV derived from th 99.9 6.4E-22 2.2E-26 148.6 18.0 194 3-203 13-254 (276)
149 3umt_A SCFV heavy chain and li 99.9 4.9E-22 1.7E-26 147.7 16.5 194 7-205 7-247 (256)
150 2ghw_B Anti-SARS SCFV antibody 99.9 1.3E-21 4.6E-26 144.5 18.3 191 8-202 8-241 (247)
151 1f3r_B FV antibody fragment; I 99.9 1.1E-21 3.8E-26 145.8 17.7 193 7-205 5-247 (257)
152 3s96_B 3B5H10 FAB light chain; 99.9 3.5E-22 1.2E-26 144.8 14.4 182 3-190 2-208 (218)
153 3esu_F Antibody 14B7* light ch 99.9 1.2E-21 4.2E-26 145.0 17.5 178 3-187 5-231 (250)
154 4fmk_A Poliovirus receptor-rel 99.9 5.4E-22 1.8E-26 144.2 15.1 195 7-203 6-219 (225)
155 2c1o_A IGK-C protein; FAB frag 99.9 1.3E-21 4.3E-26 145.3 17.4 180 2-190 38-243 (254)
156 3sob_L Antibody light chain; b 99.9 1.5E-21 5.1E-26 143.3 17.5 179 3-190 25-224 (237)
157 3juy_B 3B3 single chain varian 99.9 1.6E-21 5.4E-26 144.9 17.6 195 2-201 6-255 (256)
158 4fom_A Poliovirus receptor-rel 99.9 4.7E-23 1.6E-27 157.2 8.9 180 7-206 119-303 (308)
159 1nqb_A Single-chain antibody f 99.9 1.5E-21 5.3E-26 144.9 16.4 194 6-203 4-233 (256)
160 1dr9_A B7-1 (CD80), T lymphocy 99.9 4.8E-22 1.6E-26 142.3 13.3 172 11-191 3-190 (201)
161 1zvo_C Myeloma immunoglobulin 99.9 5.2E-21 1.8E-25 155.6 20.9 235 7-247 5-341 (512)
162 4dep_C Interleukin-1 receptor 99.9 9.4E-23 3.2E-27 158.2 10.2 172 9-203 127-333 (349)
163 4dkd_C Macrophage colony-stimu 99.9 6.3E-22 2.2E-26 149.8 14.5 178 6-205 93-283 (292)
164 2znx_A SCFV; fluorotryptohpan, 99.9 2.8E-21 9.4E-26 142.4 17.5 177 3-188 2-222 (242)
165 3u83_A Poliovirus receptor-rel 99.9 6.6E-22 2.3E-26 152.3 14.4 177 8-205 138-322 (331)
166 3vh8_G Killer cell immunoglobu 99.9 1.4E-21 4.8E-26 149.6 16.0 182 2-205 119-315 (316)
167 1moe_A Anti-CEA MAB T84.66; an 99.9 3.9E-21 1.3E-25 141.4 17.7 177 3-188 2-220 (240)
168 3bkj_L WO2 IGG2A FAB fragment 99.9 2.4E-21 8.1E-26 143.6 16.6 179 3-190 35-239 (252)
169 1q0x_L FAB 9B1, light chain; a 99.9 1.4E-21 5E-26 141.0 14.9 177 4-190 3-203 (212)
170 3gkz_A Anti-methamphetamine si 99.9 5.6E-21 1.9E-25 142.0 17.8 194 6-204 12-250 (257)
171 1zvo_C Myeloma immunoglobulin 99.9 1.7E-20 5.7E-25 152.6 21.9 215 16-249 149-447 (512)
172 3tv3_L PGT128 light chain, IG 99.9 3.3E-22 1.1E-26 144.3 10.4 176 3-190 2-199 (211)
173 2p1y_A Bispecific alpha/beta T 99.9 4.2E-21 1.5E-25 141.0 16.2 179 4-189 2-222 (238)
174 1mq8_A ICAM-1, intercellular a 99.9 1.1E-21 3.9E-26 146.8 13.2 215 5-249 2-235 (291)
175 4dzb_B Vbeta2 (MAIT T cell rec 99.9 2.9E-21 1E-25 142.6 15.1 183 3-190 2-219 (246)
176 1qok_A MFE-23 recombinant anti 99.9 5.8E-21 2E-25 143.8 17.0 193 6-203 30-268 (282)
177 3bqu_C 3H6 FAB light chain; be 99.9 3.4E-22 1.2E-26 146.5 9.9 182 3-190 24-223 (233)
178 3eow_R Poliovirus receptor; im 99.9 3.8E-22 1.3E-26 145.0 9.5 187 8-206 5-213 (221)
179 2xzc_L FAB A.17 light chain; i 99.9 1.7E-20 5.7E-25 135.8 18.1 176 5-190 4-203 (216)
180 1c1e_H Catalytic antibody 1E9 99.9 3.8E-21 1.3E-25 139.5 14.2 179 7-190 5-208 (219)
181 1hnf_A CD2; T lymphocyte adhes 99.9 3.3E-21 1.1E-25 135.2 13.1 160 10-192 7-171 (182)
182 1mju_H Immunoglobulin MS6-12; 99.9 2.2E-21 7.5E-26 141.5 12.3 178 7-190 5-205 (227)
183 1svz_A Immunoglobulin;, single 99.9 1.6E-20 5.5E-25 138.7 17.0 176 4-188 3-228 (247)
184 2oz4_A Intercellular adhesion 99.9 3.7E-21 1.3E-25 143.6 13.4 154 9-203 105-264 (265)
185 2fbj_H IGA-kappa J539 FAB (hea 99.9 1.3E-20 4.5E-25 136.8 15.9 181 7-191 5-210 (220)
186 3omz_A Human vdelta1 gamma del 99.9 8.8E-21 3E-25 141.1 15.3 183 1-188 1-231 (259)
187 3o4o_C Interleukin-1 receptor 99.9 8.7E-22 3E-26 152.2 10.1 161 12-191 130-324 (339)
188 3ux9_B SCFV antibody; five hel 99.9 1.3E-20 4.3E-25 140.0 15.5 173 7-188 7-235 (256)
189 1q9r_B S25-2 FAB (IGG1K) heavy 99.9 8.4E-21 2.9E-25 138.0 14.3 179 7-190 5-211 (222)
190 2dru_A Chimera of CD48 antigen 99.9 9E-21 3.1E-25 133.1 13.9 161 9-191 6-170 (180)
191 1nfd_E H57 FAB; complex (immun 99.9 2E-21 6.8E-26 140.3 10.4 176 5-190 3-200 (212)
192 3fku_X Neutralizing antibody F 99.9 1.9E-20 6.4E-25 140.9 15.6 196 3-204 2-251 (280)
193 2gjj_A A21 single-chain antibo 99.9 9.1E-20 3.1E-24 135.9 18.9 178 2-188 5-239 (264)
194 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.9 6.7E-21 2.3E-25 141.5 12.2 179 3-190 4-234 (256)
195 1ccz_A Protein (CD58); LFA-3, 99.9 1.2E-20 4.2E-25 131.3 12.7 157 10-191 3-160 (171)
196 2rgs_A I, IG gamma-2B heavy ch 99.9 2.9E-21 9.9E-26 140.0 9.6 176 2-190 9-204 (218)
197 2gki_A Nuclease; anti-DNA anti 99.9 4.4E-20 1.5E-24 139.6 16.5 196 7-206 27-275 (291)
198 3pl6_D MBP peptide / T-cell re 99.8 2.5E-20 8.5E-25 139.4 14.8 181 3-190 27-240 (268)
199 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 5.9E-20 2E-24 137.3 16.7 178 2-188 15-254 (268)
200 2wng_A Tyrosine-protein phosph 99.8 1.1E-20 3.7E-25 145.4 12.8 176 11-200 126-317 (327)
201 3m8o_H Immunoglobulin A1 heavy 99.8 1.6E-19 5.4E-24 131.2 18.1 178 7-190 5-211 (221)
202 3q5y_A TCR N15 beta; IG, T cel 99.8 4.4E-20 1.5E-24 135.8 15.4 181 3-190 3-212 (240)
203 3nfj_J T cell receptor beta ch 99.8 4.2E-20 1.4E-24 136.3 15.2 180 4-190 3-218 (245)
204 2c1o_A IGK-C protein; FAB frag 99.8 4.2E-21 1.4E-25 142.4 9.7 162 83-249 12-200 (254)
205 2vol_A Murine IGG FC; FC, zinc 99.8 2E-20 6.9E-25 134.5 13.0 175 3-190 2-196 (207)
206 2j6e_L IGM, FAB light chain; a 99.8 1E-20 3.4E-25 138.7 11.4 177 4-190 22-223 (234)
207 3d9a_H Heavy chain of hyhel10 99.8 2.6E-20 8.9E-25 134.2 13.3 177 7-191 5-203 (210)
208 1gsm_A Madcam-1, mucosal addre 99.8 9.9E-20 3.4E-24 129.3 15.8 153 12-190 17-193 (210)
209 4ei6_B Vbeta16 XV19 type II na 99.8 8E-20 2.7E-24 134.8 15.1 182 2-190 2-218 (245)
210 1op3_H FAB 2G12, heavy chain; 99.8 5.2E-20 1.8E-24 134.1 13.7 179 7-190 5-213 (225)
211 3mjg_X Beta-type platelet-deri 99.8 5.9E-20 2E-24 138.8 13.3 167 12-207 105-282 (289)
212 1pz5_B Heavy chain of FAB (SYA 99.8 6.8E-20 2.3E-24 133.0 13.1 177 7-190 5-209 (220)
213 1rhf_A Tyrosine-protein kinase 99.8 6.7E-20 2.3E-24 129.0 12.2 129 119-249 9-143 (182)
214 2wbj_D OB TCR; transmembrane, 99.8 2.4E-19 8.3E-24 134.8 15.9 184 3-190 25-244 (279)
215 1dee_B IGM RF 2A2; FAB-IBP com 99.8 4.4E-19 1.5E-23 129.0 16.6 182 7-191 5-216 (223)
216 2c5d_C AXL oncogene, tyrosine- 99.8 1.1E-19 3.6E-24 129.4 13.0 133 116-250 6-152 (195)
217 3mtr_A N-CAM-1, NCAM-1, neural 99.8 4.3E-19 1.5E-23 128.3 16.3 173 2-193 19-200 (215)
218 3nl4_H Antigen binding fragmen 99.8 1.8E-19 6.1E-24 130.3 13.9 179 6-190 3-202 (215)
219 3liz_H 4C3 monoclonal antibody 99.8 8.1E-20 2.8E-24 135.4 12.4 179 7-190 5-208 (253)
220 3bae_H WO2 IGG2A FAB fragment 99.8 1.8E-19 6.3E-24 131.4 13.3 178 7-190 5-214 (228)
221 1hxm_B Gamma-delta T-cell rece 99.8 1E-18 3.5E-23 128.6 17.1 182 3-191 2-218 (242)
222 3qib_D 2B4 beta chain; IG doma 99.8 3.7E-19 1.3E-23 133.2 14.4 181 3-190 28-243 (270)
223 3o3u_N Maltose-binding peripla 99.8 4.4E-19 1.5E-23 146.6 15.4 172 10-190 374-565 (581)
224 2v44_A NCAM2, neural cell adhe 99.8 2.1E-19 7E-24 127.3 11.4 127 119-248 9-139 (189)
225 1i1c_A IGG2A, IG gamma-2A chai 99.8 2.3E-19 7.7E-24 131.7 11.7 176 2-190 15-210 (239)
226 2iep_A Muscle-specific kinase 99.8 1.1E-19 3.9E-24 128.9 9.8 131 119-251 14-146 (192)
227 1l6x_A Immunoglobulin gamma-1 99.8 4.7E-19 1.6E-23 127.3 12.6 169 3-190 2-196 (207)
228 2w59_A IGY FCU3-4; immunoglobu 99.8 1.4E-19 4.8E-24 132.3 9.9 172 2-190 12-216 (231)
229 2wv3_A Neuroplastin; igcam, me 99.8 2.7E-19 9.2E-24 126.8 11.0 129 113-247 3-136 (190)
230 1c5d_H Monoclonal antibody aga 99.8 1.8E-18 6E-23 125.1 15.5 177 8-190 6-204 (215)
231 2xqy_G A13-D6.3 monoclonal ant 99.8 5.9E-19 2E-23 131.1 13.2 178 6-189 10-212 (261)
232 3to4_D NKT vbeta2 (mouse varia 99.8 2.7E-18 9.2E-23 127.2 16.7 179 5-189 4-217 (253)
233 1epf_A NCAM, protein (neural c 99.8 7.1E-19 2.4E-23 124.7 12.6 129 119-249 9-144 (191)
234 3lcy_A Titin; A-BAND, IG tande 99.8 4.8E-19 1.6E-23 126.1 11.7 131 119-252 14-150 (197)
235 3knb_B Obscurin-like protein 1 99.8 3.5E-19 1.2E-23 113.7 9.4 96 1-114 12-107 (107)
236 1dn0_B IGM-kappa cold agglutin 99.8 3.3E-18 1.1E-22 125.1 15.8 180 7-191 5-216 (232)
237 2yd6_A PTPRD protein; hydrolas 99.8 8.1E-19 2.8E-23 126.6 12.4 128 119-249 13-152 (212)
238 2v5t_A NCAM2, N-CAM 2, neural 99.8 3.8E-19 1.3E-23 125.8 10.5 133 118-252 8-145 (189)
239 2yd1_A Tyrosine-protein phosph 99.8 1.2E-18 4.2E-23 125.6 13.2 131 118-249 12-154 (212)
240 1bec_A 14.3.D T cell antigen r 99.8 2.5E-18 8.6E-23 126.2 14.2 179 5-189 2-210 (238)
241 3bn9_D E2 FAB heavy chain; ant 99.8 8.9E-19 3E-23 129.7 11.7 177 7-189 5-217 (257)
242 2a38_A Titin; Z1Z2, structural 99.8 9E-19 3.1E-23 124.4 11.3 131 118-251 11-149 (194)
243 3k0w_A Mucosa-associated lymph 99.8 2.1E-18 7.3E-23 124.9 13.4 127 117-251 23-164 (218)
244 2wqr_A IG epsilon chain C regi 99.8 2.4E-19 8.1E-24 137.7 8.8 169 7-190 118-308 (323)
245 1oga_E TRBC1, T-cell receptor 99.8 5.5E-18 1.9E-22 125.5 15.7 181 4-190 5-217 (252)
246 1vca_A VCAM-D1,2, human vascul 99.8 1.2E-18 4.2E-23 124.6 11.5 126 122-249 11-138 (202)
247 1f97_A Junction adhesion molec 99.8 2.6E-18 8.8E-23 123.7 12.8 130 119-250 8-151 (212)
248 1ypz_F T-cell receptor gamma c 99.8 4.4E-18 1.5E-22 124.3 14.0 179 5-190 4-215 (230)
249 4fa8_A Secreted protein BARF1; 99.8 3.2E-19 1.1E-23 127.4 6.9 123 121-246 2-147 (203)
250 2vr9_A Roundabout 1, ROBO; imm 99.8 1.4E-18 4.8E-23 125.7 10.3 130 118-248 15-152 (217)
251 2j8h_A Titin, connectin; cardi 99.8 1.2E-18 4.1E-23 124.1 9.8 132 118-252 10-151 (197)
252 3rbs_A Myomesin-1; immunoglobu 99.8 2.5E-18 8.6E-23 123.3 11.4 125 120-250 10-162 (207)
253 1nbq_A JAM, junctional adhesio 99.8 1.8E-18 6.3E-23 124.2 10.7 130 119-250 11-153 (209)
254 2jll_A NCAM2, neural cell adhe 99.8 1.9E-18 6.3E-23 135.9 11.4 133 115-250 3-145 (389)
255 2d3v_A Leukocyte immunoglobuli 99.8 3E-18 1E-22 122.0 10.2 121 122-247 14-140 (196)
256 3qhz_H Human monoclonal antibo 99.8 9.6E-18 3.3E-22 122.6 12.4 180 7-190 5-217 (232)
257 3sgj_C Human FCG3A receptor; r 99.8 8.5E-18 2.9E-22 120.4 11.6 117 120-248 15-132 (204)
258 2gi7_A GPVI protein; IG-like d 99.8 1.6E-17 5.3E-22 117.1 12.8 124 113-248 8-135 (184)
259 3tv3_H PGT128 heavy chain, IG 99.8 2.1E-17 7.2E-22 121.3 13.9 178 7-190 5-225 (239)
260 3knb_A Titin; IG-like, titin, 99.8 8.3E-18 2.9E-22 106.0 10.1 95 2-112 5-99 (100)
261 3n9g_H FAB fragment of MAB CR4 99.8 3.2E-17 1.1E-21 119.7 14.6 176 7-190 5-213 (230)
262 1ypz_E T cell receptor delta, 99.8 3.8E-17 1.3E-21 117.2 14.7 174 4-190 3-197 (207)
263 1za6_B IGG heavy chain; immuno 99.8 8.2E-18 2.8E-22 130.2 12.0 174 2-190 120-329 (344)
264 3u2s_H PG9 heavy chain; greek 99.8 2E-17 6.9E-22 122.0 13.5 179 6-190 3-226 (248)
265 2v9r_A Roundabout homolog 1; p 99.8 7E-18 2.4E-22 121.5 10.7 132 118-250 15-157 (212)
266 3iu4_H CHP3 FAB heavy chain; a 99.7 4.6E-17 1.6E-21 121.1 15.0 175 8-190 6-212 (263)
267 2pet_A Lutheran blood group gl 99.7 1.2E-17 3.9E-22 122.0 11.2 132 118-250 6-165 (231)
268 1uct_A Immunoglobulin alpha FC 99.7 1.9E-17 6.5E-22 119.8 11.6 131 114-248 10-148 (218)
269 1hng_A CD2; T lymphocyte adhes 99.7 1.7E-17 5.7E-22 116.0 10.9 123 122-251 6-141 (176)
270 2va4_A NCAM2, N-CAM 2, neural 99.7 1.6E-17 5.6E-22 117.7 11.0 124 121-248 13-139 (192)
271 3nl4_L Antigen binding fragmen 99.7 1.5E-17 5.1E-22 119.9 11.0 130 119-249 8-159 (213)
272 3mj8_L Stimulatory hamster ant 99.7 1.9E-17 6.6E-22 119.4 11.2 128 121-249 9-160 (213)
273 1lk3_L 9D7 light chain; antige 99.7 2E-17 6.8E-22 119.1 10.6 130 119-249 7-157 (210)
274 3d9a_L Light chain of hyhel10 99.7 1.5E-17 5E-22 120.0 9.6 130 119-249 8-158 (213)
275 1f2q_A High affinity immunoglo 99.7 2.2E-17 7.5E-22 115.5 10.1 118 119-248 11-129 (176)
276 3r4d_A CEA-related cell adhesi 99.7 1.7E-16 5.7E-21 113.9 14.9 128 121-251 8-155 (208)
277 1ugn_A LIR1, leukocyte immunog 99.7 2.4E-17 8.3E-22 117.5 10.3 122 121-247 13-141 (198)
278 2r15_A Myomesin-1; sarcomeric 99.7 2.3E-17 7.7E-22 118.8 10.2 125 124-251 14-163 (212)
279 3p2t_A Leukocyte immunoglobuli 99.7 2.5E-17 8.7E-22 117.2 10.2 122 122-248 14-141 (196)
280 3bp6_B Programmed cell death 1 99.7 2E-17 6.9E-22 118.3 9.7 125 120-248 10-146 (202)
281 1fnl_A Low affinity immunoglob 99.7 5.5E-17 1.9E-21 113.3 11.5 118 119-248 14-132 (175)
282 1gsm_A Madcam-1, mucosal addre 99.7 5.8E-17 2E-21 115.1 11.6 121 122-249 17-143 (210)
283 3s97_C Contactin-1; carbonic a 99.7 3.1E-17 1E-21 117.1 10.3 129 119-249 15-157 (201)
284 2aty_A Complement receptor chi 99.7 1.3E-16 4.3E-21 124.9 14.6 170 8-190 173-361 (376)
285 1ow0_A IG alpha-1 chain C regi 99.7 1.7E-18 5.9E-23 125.0 3.5 174 2-190 3-199 (214)
286 3r06_A Anti-mouse CD3epsilon a 99.7 5E-17 1.7E-21 117.2 10.9 130 119-249 8-158 (213)
287 3sob_H Antibody heavy chain, l 99.7 3E-16 1E-20 116.4 15.0 175 8-190 29-239 (256)
288 3shs_A HOC head outer capsid p 99.7 7.1E-16 2.4E-20 110.9 16.1 203 3-241 3-230 (304)
289 2cqv_A MLCK, myosin light chai 99.7 9.5E-17 3.2E-21 103.9 10.7 97 2-116 7-103 (114)
290 3mlr_H Human monoclonal anti-H 99.7 3.5E-16 1.2E-20 113.8 14.5 175 8-190 6-214 (226)
291 4acp_A IG gamma-1 chain C regi 99.7 7.6E-17 2.6E-21 118.0 10.3 176 2-190 22-217 (240)
292 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.3E-16 4.4E-21 114.0 11.2 131 113-248 8-149 (201)
293 1q0x_L FAB 9B1, light chain; a 99.7 6.4E-17 2.2E-21 116.6 9.6 130 119-249 7-161 (212)
294 3grw_A Fibroblast growth facto 99.7 1.8E-16 6.1E-21 116.4 12.2 128 120-250 23-163 (241)
295 2x1w_L Vascular endothelial gr 99.7 5.2E-17 1.8E-21 117.2 9.1 125 120-247 15-149 (213)
296 2edj_A Roundabout homolog 2; K 99.7 1.5E-16 5.3E-21 100.4 10.2 93 1-113 7-99 (100)
297 3jz7_A MCAR, CAR, coxsackievir 99.7 1.4E-16 4.6E-21 114.8 11.3 126 120-247 8-166 (214)
298 3ry4_A Low affinity immunoglob 99.7 3.1E-16 1E-20 108.9 12.5 117 120-248 12-129 (170)
299 1hxm_A Gamma-delta T-cell rece 99.7 1.6E-15 5.5E-20 110.2 16.7 177 4-190 3-198 (229)
300 1dr9_A B7-1 (CD80), T lymphocy 99.7 1E-16 3.5E-21 114.5 10.2 127 121-249 3-151 (201)
301 2if7_A SLAM family member 6; N 99.7 1.9E-16 6.4E-21 112.4 11.2 129 120-250 6-155 (193)
302 3ojm_B Fibroblast growth facto 99.7 1.8E-16 6.2E-21 115.5 11.2 127 120-249 27-166 (231)
303 2nzi_A Titin; IG-domain, FNIII 99.7 6.5E-16 2.2E-20 117.4 14.6 154 10-192 112-280 (305)
304 2kdg_A Myotilin; immonoglobuli 99.7 2.2E-16 7.6E-21 99.7 9.9 93 2-113 5-99 (100)
305 3tv3_L PGT128 light chain, IG 99.7 1.3E-16 4.4E-21 114.9 9.9 125 121-248 9-156 (211)
306 1g1c_A Immunoglobulin-like dom 99.7 2.2E-16 7.4E-21 99.5 9.6 94 2-112 5-98 (99)
307 1jbj_A CD3 epsilon and gamma e 99.7 1.9E-16 6.7E-21 111.6 10.4 113 123-249 10-148 (186)
308 3qib_D 2B4 beta chain; IG doma 99.7 5.5E-17 1.9E-21 121.3 7.8 160 83-250 4-196 (270)
309 2ifg_A High affinity nerve gro 99.7 2.1E-18 7.2E-23 133.7 -0.3 154 86-251 136-292 (347)
310 2kkq_A Myotilin; unknown funct 99.7 5.9E-16 2E-20 100.4 11.4 98 2-115 15-112 (116)
311 2v5y_A Receptor-type tyrosine- 99.7 8.5E-16 2.9E-20 130.2 15.5 186 15-228 89-284 (731)
312 2eo9_A Roundabout homolog 1; b 99.7 2.3E-16 8E-21 102.7 9.2 94 1-114 7-100 (118)
313 3b5h_A Cervical EMMPRIN, HAB18 99.7 5.6E-16 1.9E-20 109.0 11.8 110 122-241 8-120 (184)
314 3sob_L Antibody light chain; b 99.7 1.5E-16 5.1E-21 116.5 9.2 130 119-249 31-181 (237)
315 3bfo_A Mucosa-associated lymph 99.7 5.4E-16 1.8E-20 96.1 10.3 86 1-112 2-87 (91)
316 3f8u_B Tapasin; endoplasmic re 99.7 8.4E-16 2.9E-20 118.5 13.5 189 8-198 164-397 (401)
317 3irg_B Obscurin-like protein 1 99.7 5.4E-16 1.9E-20 99.2 10.5 92 2-114 13-107 (107)
318 2vol_A Murine IGG FC; FC, zinc 99.7 8E-17 2.7E-21 115.6 7.1 125 124-249 15-155 (207)
319 3s96_B 3B5H10 FAB light chain; 99.7 2.3E-16 7.9E-21 114.1 9.5 127 121-248 9-166 (218)
320 1iam_A ICAM-1, CD54, intercell 99.7 8.4E-16 2.9E-20 106.8 11.9 156 5-190 2-166 (185)
321 3qp3_A Titin; I-SET IG-like, s 99.7 5.2E-16 1.8E-20 98.5 10.1 94 2-113 8-101 (103)
322 2fbo_J V1V2;, variable region- 99.7 2.7E-16 9.3E-21 116.1 9.8 127 120-248 10-179 (250)
323 2rgs_A I, IG gamma-2B heavy ch 99.7 1.5E-16 5.1E-21 115.1 8.1 124 124-248 23-162 (218)
324 1oll_A NK receptor; immune sys 99.7 2.6E-16 8.8E-21 111.3 9.1 120 123-247 14-139 (188)
325 1hnf_A CD2; T lymphocyte adhes 99.7 4E-16 1.4E-20 109.3 9.9 119 121-246 8-141 (182)
326 1u2h_A APEG-1, aortic preferen 99.7 7.7E-16 2.6E-20 97.0 10.2 94 2-112 5-98 (99)
327 2xzc_L FAB A.17 light chain; i 99.7 3.6E-16 1.2E-20 113.0 9.8 130 119-249 7-160 (216)
328 1nfd_E H57 FAB; complex (immun 99.7 9.7E-17 3.3E-21 115.6 6.5 130 119-249 6-159 (212)
329 1wit_A Twitchin 18TH IGSF modu 99.7 2.6E-16 8.9E-21 98.0 7.6 89 2-110 2-92 (93)
330 3bn3_B ICAM-5, intercellular a 99.7 2.7E-15 9.1E-20 105.1 13.2 159 3-190 3-174 (196)
331 3bkj_L WO2 IGG2A FAB fragment 99.7 3.2E-16 1.1E-20 116.0 9.1 130 119-249 41-196 (252)
332 1c1e_H Catalytic antibody 1E9 99.7 5.3E-16 1.8E-20 112.3 9.8 127 119-246 7-167 (219)
333 3knb_B Obscurin-like protein 1 99.7 2.6E-16 8.9E-21 100.3 7.2 87 117-205 18-107 (107)
334 3bqu_C 3H6 FAB light chain; be 99.7 5.8E-17 2E-21 118.5 4.7 130 119-249 30-180 (233)
335 4frw_A Poliovirus receptor-rel 99.7 1.2E-15 4.1E-20 110.0 11.4 131 119-251 6-164 (218)
336 2ckn_A Basic fibroblast growth 99.7 7.1E-16 2.4E-20 96.3 8.9 86 2-110 9-94 (95)
337 2yuz_A Myosin-binding protein 99.7 4.8E-16 1.6E-20 97.9 8.0 92 2-115 7-98 (100)
338 3sbw_C Programmed cell death 1 99.7 1.3E-15 4.3E-20 110.5 11.3 127 119-249 8-161 (222)
339 3u1s_H FAB PGT145 heavy chain; 99.6 4.8E-15 1.6E-19 110.5 14.7 175 8-190 29-253 (267)
340 1b6u_A KIR2DL3, P58 killer cel 99.6 2E-15 6.8E-20 111.7 12.3 132 112-248 6-148 (257)
341 2dm2_A Palladin; beta-sandwich 99.6 7.5E-16 2.6E-20 99.0 8.2 96 1-114 7-104 (110)
342 2yr3_A Myosin light chain kina 99.6 5.1E-16 1.8E-20 97.8 7.3 88 2-110 11-98 (99)
343 3puc_A Titin; I-SET IG-like do 99.6 1.8E-15 6.2E-20 95.2 9.8 92 2-111 6-97 (99)
344 2j6e_L IGM, FAB light chain; a 99.6 1.1E-15 3.6E-20 111.8 9.6 130 119-249 26-181 (234)
345 2zg1_A Sialic acid-binding IG- 99.6 4.7E-15 1.6E-19 106.8 12.8 127 119-246 7-168 (214)
346 3eow_R Poliovirus receptor; im 99.6 5.9E-16 2E-20 112.2 8.1 124 119-244 6-156 (221)
347 1ccz_A Protein (CD58); LFA-3, 99.6 2E-15 6.9E-20 104.9 10.2 118 122-250 5-135 (171)
348 2dm3_A KIAA0992 protein, palla 99.6 4.4E-16 1.5E-20 100.1 6.3 97 2-115 9-105 (110)
349 3pv7_A B7-H6, IG-like domain-c 99.6 1.1E-15 3.7E-20 112.8 8.9 126 119-247 10-162 (248)
350 2e7c_A Myosin-binding protein 99.6 3.2E-15 1.1E-19 97.3 9.9 87 9-114 31-117 (118)
351 3cx2_A Myosin-binding protein 99.6 2.1E-15 7.1E-20 96.5 8.8 101 2-111 4-107 (108)
352 2ny1_B T-cell surface glycopro 99.6 1.4E-15 4.8E-20 107.0 8.7 118 121-249 4-141 (184)
353 3irg_A Titin; IG-like, titin, 99.6 4.7E-15 1.6E-19 93.5 10.3 94 2-111 5-98 (100)
354 4f80_A Butyrophilin subfamily 99.6 4.2E-15 1.4E-19 108.1 11.4 125 120-248 12-163 (226)
355 1waa_A Titin; metal binding pr 99.6 2.2E-15 7.7E-20 93.4 8.4 89 1-112 4-92 (93)
356 4acp_A IG gamma-1 chain C regi 99.6 2.8E-16 9.6E-21 115.0 4.9 156 88-248 1-175 (240)
357 3kvq_A Vascular endothelial gr 99.6 1.3E-15 4.3E-20 97.6 7.4 93 2-114 10-102 (108)
358 1i1c_A IGG2A, IG gamma-2A chai 99.6 7.6E-16 2.6E-20 112.9 6.8 125 124-249 29-169 (239)
359 3d9a_H Heavy chain of hyhel10 99.6 1.7E-15 5.9E-20 108.9 8.5 124 120-246 8-161 (210)
360 1nct_A Titin; cell adhesion, g 99.6 6.6E-16 2.2E-20 98.5 5.5 92 2-111 14-105 (106)
361 2ens_A Advanced glycosylation 99.6 1.4E-15 4.6E-20 95.2 6.7 85 2-112 10-95 (96)
362 1nqb_A Single-chain antibody f 99.6 3.7E-15 1.3E-19 110.5 10.2 126 119-246 7-169 (256)
363 3caf_A Fibroblast growth facto 99.6 2.6E-15 9E-20 94.7 8.1 92 2-110 4-99 (100)
364 2dru_A Chimera of CD48 antigen 99.6 7E-15 2.4E-19 103.0 11.0 119 120-247 7-142 (180)
365 4i0k_A CD276 antigen; immunogl 99.6 3.7E-15 1.3E-19 108.0 9.9 124 121-248 4-155 (222)
366 2dav_A SLOW MYBP-C, myosin-bin 99.6 2.8E-15 9.5E-20 97.3 8.2 100 3-112 8-111 (126)
367 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 4.7E-15 1.6E-19 107.5 10.1 127 120-247 8-171 (222)
368 3o3u_N Maltose-binding peripla 99.6 6.8E-15 2.3E-19 121.6 12.2 129 121-250 375-518 (581)
369 4fmk_A Poliovirus receptor-rel 99.6 4.5E-15 1.5E-19 107.5 9.7 129 120-249 9-166 (225)
370 1p6f_A NKP46, natural cytotoxi 99.6 3.7E-15 1.3E-19 109.4 9.3 120 123-247 17-142 (242)
371 3nfj_J T cell receptor beta ch 99.6 4.3E-15 1.5E-19 109.4 9.7 131 119-250 8-171 (245)
372 4dzb_B Vbeta2 (MAIT T cell rec 99.6 2.9E-15 9.8E-20 110.4 8.8 131 119-250 8-172 (246)
373 1f3r_B FV antibody fragment; I 99.6 7.9E-15 2.7E-19 108.8 11.0 125 120-246 8-182 (257)
374 2w59_A IGY FCU3-4; immunoglobu 99.6 4.4E-15 1.5E-19 108.3 9.3 127 120-250 21-165 (231)
375 1fhg_A Telokin; immunoglobulin 99.6 1.1E-14 3.6E-19 99.4 10.6 99 2-117 41-139 (154)
376 2edn_A Myosin-binding protein 99.6 2.6E-15 8.9E-20 96.3 6.9 101 3-113 13-117 (118)
377 1mju_H Immunoglobulin MS6-12; 99.6 3.6E-15 1.2E-19 108.5 8.2 126 120-246 8-164 (227)
378 2bk8_A Connectin, M1, titin he 99.6 3.1E-14 1E-18 89.2 11.3 89 4-112 3-94 (97)
379 3esu_F Antibody 14B7* light ch 99.6 1.3E-14 4.3E-19 107.2 11.0 122 119-242 11-170 (250)
380 2lu7_A Obscurin-like protein 1 99.6 4.6E-15 1.6E-19 89.9 6.9 82 8-112 2-83 (84)
381 2v9t_A Roundabout homolog 1; s 99.6 1.4E-14 4.7E-19 94.1 9.6 98 2-114 9-111 (117)
382 2cqv_A MLCK, myosin light chai 99.6 3.2E-14 1.1E-18 91.9 11.0 91 118-210 13-106 (114)
383 2fbj_H IGA-kappa J539 FAB (hea 99.6 1.3E-14 4.4E-19 105.1 10.1 125 120-246 8-166 (220)
384 2qsq_A Carcinoembryonic antige 99.6 2.2E-14 7.4E-19 91.6 9.9 107 5-113 3-110 (111)
385 1op3_H FAB 2G12, heavy chain; 99.6 1.1E-14 3.6E-19 105.9 9.5 126 120-246 8-171 (225)
386 1moe_A Anti-CEA MAB T84.66; an 99.6 1.8E-14 6.2E-19 105.7 10.8 122 119-242 8-158 (240)
387 2lvc_A Obscurin-like protein 1 99.6 3.3E-15 1.1E-19 92.0 5.7 78 2-97 4-83 (91)
388 2p1y_A Bispecific alpha/beta T 99.6 2.5E-14 8.6E-19 104.8 11.4 122 119-243 7-165 (238)
389 4ei6_B Vbeta16 XV19 type II na 99.6 1.4E-14 4.8E-19 106.6 10.0 130 119-250 9-171 (245)
390 2edj_A Roundabout homolog 2; K 99.6 4.2E-14 1.4E-18 89.1 10.8 85 119-205 15-100 (100)
391 2ghw_B Anti-SARS SCFV antibody 99.6 1.2E-14 4E-19 107.2 9.5 125 120-246 10-178 (247)
392 1pz5_B Heavy chain of FAB (SYA 99.6 1E-14 3.5E-19 105.6 8.9 125 120-245 8-167 (220)
393 1c5d_H Monoclonal antibody aga 99.6 1.6E-14 5.6E-19 104.2 9.8 126 120-246 8-165 (215)
394 1l6x_A Immunoglobulin gamma-1 99.6 1.1E-14 3.7E-19 104.4 8.7 124 125-248 16-154 (207)
395 1sy6_A T-cell surface glycopro 99.6 1.4E-14 5E-19 103.5 9.3 109 124-249 15-155 (204)
396 3pl6_D MBP peptide / T-cell re 99.6 1.2E-14 4.2E-19 108.4 9.2 129 119-249 33-192 (268)
397 1mq8_A ICAM-1, intercellular a 99.6 2.6E-15 8.8E-20 112.4 5.4 171 9-203 93-282 (291)
398 1bec_A 14.3.D T cell antigen r 99.6 2.9E-14 9.8E-19 104.5 10.9 130 119-250 6-168 (238)
399 2znx_A SCFV; fluorotryptohpan, 99.6 2.4E-14 8.4E-19 105.2 10.4 122 119-242 8-161 (242)
400 1dee_B IGM RF 2A2; FAB-IBP com 99.6 2.5E-14 8.7E-19 103.8 10.4 128 120-248 8-172 (223)
401 3so5_A LIG-3, leucine-rich rep 99.6 5.2E-14 1.8E-18 90.5 10.8 100 2-110 10-111 (112)
402 3q5y_A TCR N15 beta; IG, T cel 99.6 1.9E-14 6.4E-19 105.6 9.5 130 119-250 9-169 (240)
403 2eo9_A Roundabout homolog 1; b 99.6 7.7E-14 2.6E-18 90.7 11.4 100 118-219 14-116 (118)
404 3auv_A SC-DSFV derived from th 99.6 3.1E-14 1E-18 106.7 10.8 122 119-242 19-173 (276)
405 1hxm_B Gamma-delta T-cell rece 99.6 4.8E-14 1.6E-18 103.6 11.6 128 119-247 8-177 (242)
406 3uzq_A Anti-dengue MAB 4E11; d 99.6 1.9E-14 6.4E-19 106.5 9.5 122 119-242 8-174 (253)
407 2kkq_A Myotilin; unknown funct 99.6 6.9E-14 2.4E-18 90.6 11.0 92 115-208 18-114 (116)
408 3knb_A Titin; IG-like, titin, 99.6 2E-14 6.8E-19 90.4 8.1 83 118-202 11-98 (100)
409 2wbj_D OB TCR; transmembrane, 99.5 1.9E-14 6.4E-19 108.1 9.4 130 119-249 31-196 (279)
410 2yuv_A Myosin-binding protein 99.5 5.7E-14 2E-18 88.5 9.9 90 2-114 7-97 (100)
411 3umt_A SCFV heavy chain and li 99.5 5.2E-14 1.8E-18 104.3 11.1 121 120-242 10-175 (256)
412 1gl4_B Basement membrane-speci 99.5 5.5E-14 1.9E-18 88.2 9.4 82 7-111 15-97 (98)
413 3kvq_A Vascular endothelial gr 99.5 4.6E-14 1.6E-18 90.2 9.2 99 106-206 3-103 (108)
414 3bae_H WO2 IGG2A FAB fragment 99.5 1.6E-14 5.5E-19 105.1 7.8 126 120-246 8-173 (228)
415 2cr3_A Basic fibroblast growth 99.5 3E-14 1E-18 89.6 8.0 86 6-114 7-92 (99)
416 2yuz_A Myosin-binding protein 99.5 4.6E-14 1.6E-18 88.8 8.8 84 117-206 12-98 (100)
417 1wwb_X Protein (brain derived 99.5 1.1E-13 3.7E-18 87.6 10.4 98 2-115 4-101 (103)
418 1x44_A Myosin-binding protein 99.5 3.7E-14 1.3E-18 89.9 8.3 92 2-114 7-98 (103)
419 3nl4_H Antigen binding fragmen 99.5 3E-14 1E-18 102.8 8.8 128 119-247 6-164 (215)
420 1gxe_A Myosin binding protein 99.5 3.4E-14 1.2E-18 94.6 8.4 100 8-111 24-138 (139)
421 3omz_A Human vdelta1 gamma del 99.5 6.3E-14 2.2E-18 104.0 10.8 123 119-242 9-174 (259)
422 2edf_A Obscurin; beta-sandwich 99.5 1.7E-14 5.8E-19 91.5 6.6 91 2-115 8-98 (103)
423 2eny_A Obscurin; beta-sandwich 99.5 1.7E-14 5.7E-19 91.5 6.6 92 2-115 8-100 (104)
424 3m45_A Cell adhesion molecule 99.5 5.4E-14 1.8E-18 89.9 9.0 102 2-114 6-108 (108)
425 2dlt_A Myosin binding protein 99.5 2.7E-14 9.2E-19 91.0 7.1 91 1-112 7-97 (106)
426 2xqy_G A13-D6.3 monoclonal ant 99.5 3.9E-14 1.3E-18 105.2 9.0 128 119-247 13-173 (261)
427 3mj6_A Junctional adhesion mol 99.5 6.2E-14 2.1E-18 104.5 10.2 118 119-242 12-158 (268)
428 2e6q_A Obscurin-like protein 1 99.5 1.2E-13 4.2E-18 87.9 10.0 94 2-115 8-108 (112)
429 1he7_A High affinity nerve gro 99.5 1.3E-13 4.4E-18 89.4 10.1 99 2-115 4-102 (126)
430 2e6p_A Obscurin-like protein 1 99.5 3.5E-14 1.2E-18 90.1 7.4 91 2-115 7-100 (104)
431 2edh_A Obscurin; structural ge 99.5 1.3E-13 4.5E-18 88.8 10.2 87 2-115 19-108 (113)
432 4hwu_A Fibroblast growth facto 99.5 8.5E-14 2.9E-18 86.8 8.9 85 6-114 5-89 (95)
433 3irg_B Obscurin-like protein 1 99.5 3.5E-14 1.2E-18 90.6 7.2 86 118-205 19-107 (107)
434 2cr6_A KIAA1556 protein, obscu 99.5 8.8E-14 3E-18 90.0 9.0 94 2-116 13-106 (115)
435 1qok_A MFE-23 recombinant anti 99.5 9.7E-14 3.3E-18 104.3 10.4 125 119-246 33-204 (282)
436 2xot_A Amphoterin-induced prot 99.5 4.2E-14 1.4E-18 110.0 8.6 109 8-145 252-360 (361)
437 2e7b_A Obscurin; IG-like domai 99.5 5.8E-14 2E-18 89.0 7.6 87 2-114 8-97 (103)
438 3qr2_A Basigin; CD147, EMMPRIN 99.5 2.5E-14 8.5E-19 95.6 6.1 98 1-102 20-117 (137)
439 3to4_D NKT vbeta2 (mouse varia 99.5 8.6E-14 2.9E-18 102.9 9.5 130 119-249 8-170 (253)
440 1svz_A Immunoglobulin;, single 99.5 1.3E-13 4.4E-18 101.6 10.4 122 119-242 8-166 (247)
441 1dn0_B IGM-kappa cold agglutin 99.5 1.4E-13 4.9E-18 100.4 10.4 128 120-248 8-172 (232)
442 2edk_A Myosin-binding protein 99.5 1.2E-14 4E-19 91.9 4.0 92 2-113 8-100 (101)
443 1ypz_F T-cell receptor gamma c 99.5 1.2E-13 4.3E-18 100.6 9.9 129 119-248 8-176 (230)
444 2k1m_A Myosin-binding protein 99.5 1.2E-13 4.3E-18 86.0 8.5 87 2-111 8-94 (95)
445 3gkz_A Anti-methamphetamine si 99.5 2.4E-13 8E-18 100.8 11.3 121 119-241 15-178 (257)
446 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 2.1E-13 7.2E-18 101.0 11.0 120 119-241 10-172 (256)
447 2dku_A KIAA1556 protein; beta- 99.5 2.1E-13 7.2E-18 86.3 9.3 88 2-115 8-98 (103)
448 1oga_E TRBC1, T-cell receptor 99.5 2.1E-13 7.3E-18 100.7 10.5 130 119-250 10-170 (252)
449 2lu7_A Obscurin-like protein 1 99.5 1.9E-13 6.5E-18 82.8 8.4 77 120-203 4-83 (84)
450 2aty_A Complement receptor chi 99.5 2E-13 6.8E-18 106.7 10.7 124 124-248 180-319 (376)
451 3juy_B 3B3 single chain varian 99.5 2.9E-13 9.8E-18 100.3 11.1 123 117-241 11-186 (256)
452 3m8o_H Immunoglobulin A1 heavy 99.5 1.6E-13 5.4E-18 99.4 9.3 126 120-247 8-168 (221)
453 3c6l_A TCR 2W20 alpha chain; T 99.2 2.7E-15 9.4E-20 104.8 0.0 172 5-185 3-183 (185)
454 3bn9_D E2 FAB heavy chain; ant 99.5 7.1E-14 2.4E-18 103.4 7.5 126 120-246 8-176 (257)
455 3s35_X Vascular endothelial gr 99.5 8.2E-14 2.8E-18 91.1 7.0 99 10-118 16-116 (122)
456 2gjj_A A21 single-chain antibo 99.5 3.7E-13 1.3E-17 100.2 11.2 122 119-242 12-177 (264)
457 2e7c_A Myosin-binding protein 99.5 4.8E-13 1.6E-17 86.9 10.3 83 120-205 32-117 (118)
458 2yr3_A Myosin light chain kina 99.5 8.6E-14 2.9E-18 87.5 6.6 81 119-201 18-98 (99)
459 3qp3_A Titin; I-SET IG-like, s 99.5 2E-13 6.7E-18 86.5 8.2 84 119-204 15-101 (103)
460 2xot_A Amphoterin-induced prot 99.5 2.1E-13 7E-18 106.1 9.7 104 119-238 253-360 (361)
461 2cpc_A KIAA0657 protein; immun 99.5 5.6E-13 1.9E-17 85.9 10.2 91 2-115 10-103 (113)
462 3ux9_B SCFV antibody; five hel 99.5 4.4E-13 1.5E-17 99.2 11.0 122 119-242 9-173 (256)
463 1pd6_A Cardiac MYBP-C;, myosin 99.5 4E-13 1.4E-17 85.0 9.1 77 2-95 15-92 (104)
464 2dm7_A KIAA1556 protein; beta- 99.5 3.4E-13 1.2E-17 86.1 8.8 87 1-114 7-96 (108)
465 1g1c_A Immunoglobulin-like dom 99.5 2.2E-13 7.4E-18 85.6 7.6 83 118-202 11-97 (99)
466 1wit_A Twitchin 18TH IGSF modu 99.5 1.8E-13 6.3E-18 84.9 7.0 81 119-201 9-92 (93)
467 2kdg_A Myotilin; immonoglobuli 99.5 2.1E-13 7.2E-18 85.8 7.2 84 119-204 12-99 (100)
468 2dm2_A Palladin; beta-sandwich 99.5 4.8E-13 1.6E-17 85.8 9.0 87 118-206 14-105 (110)
469 3liz_H 4C3 monoclonal antibody 99.5 2.2E-13 7.6E-18 100.7 8.5 125 120-245 8-166 (253)
470 2ckn_A Basic fibroblast growth 99.5 4.4E-13 1.5E-17 83.5 8.5 79 119-201 16-94 (95)
471 2v5y_A Receptor-type tyrosine- 99.5 1.2E-11 4E-16 105.0 19.9 169 2-192 165-344 (731)
472 3puc_A Titin; I-SET IG-like do 99.4 3.5E-13 1.2E-17 84.6 7.9 82 119-202 13-97 (99)
473 2bk8_A Connectin, M1, titin he 99.4 9.8E-13 3.3E-17 82.3 9.8 83 118-202 7-93 (97)
474 3q0h_A T cell immunoreceptor w 99.4 9E-13 3.1E-17 85.3 9.8 102 7-116 8-112 (117)
475 1wwb_X Protein (brain derived 99.4 7.8E-13 2.7E-17 83.6 9.2 80 125-206 14-101 (103)
476 1wwc_A Protein (NT-3 growth fa 99.4 3.2E-13 1.1E-17 87.8 7.5 96 107-206 2-104 (118)
477 1he7_A High affinity nerve gro 99.4 3.6E-13 1.2E-17 87.3 7.6 79 126-206 14-102 (126)
478 1waa_A Titin; metal binding pr 99.4 6.3E-13 2.2E-17 82.2 8.4 80 116-202 9-91 (93)
479 1ow0_A IG alpha-1 chain C regi 99.4 2.2E-14 7.6E-19 103.4 2.0 127 119-249 11-153 (214)
480 1x9q_A SCFV, 4M5.3 anti-fluore 99.4 6.1E-13 2.1E-17 99.2 9.8 122 119-242 22-190 (268)
481 3rbg_A Cytotoxic and regulator 99.4 3.3E-13 1.1E-17 88.5 7.4 102 4-115 3-104 (124)
482 1nct_A Titin; cell adhesion, g 99.4 1.2E-13 4.1E-18 87.9 5.0 83 118-202 20-105 (106)
483 1fhg_A Telokin; immunoglobulin 99.4 4.2E-13 1.4E-17 91.5 8.0 91 119-211 48-142 (154)
484 3bfo_A Mucosa-associated lymph 99.4 6.5E-13 2.2E-17 82.0 8.1 78 119-203 10-87 (91)
485 2gki_A Nuclease; anti-DNA anti 99.4 4.4E-13 1.5E-17 101.2 8.8 121 120-242 30-202 (291)
486 3mtr_A N-CAM-1, NCAM-1, neural 99.4 8.8E-13 3E-17 95.0 9.9 124 118-245 24-157 (215)
487 2cry_A KIN of IRRE-like protei 99.4 5.4E-14 1.8E-18 92.0 2.9 100 2-114 14-115 (122)
488 2cr3_A Basic fibroblast growth 99.4 5.9E-13 2E-17 83.6 7.5 82 120-205 11-92 (99)
489 2dm3_A KIAA0992 protein, palla 99.4 2.4E-13 8.3E-18 87.1 5.8 87 119-207 16-106 (110)
490 1gxe_A Myosin binding protein 99.4 2.7E-13 9.3E-18 90.2 6.1 82 119-202 25-138 (139)
491 1x44_A Myosin-binding protein 99.4 1.6E-12 5.4E-17 82.3 9.3 82 118-206 13-99 (103)
492 1u2h_A APEG-1, aortic preferen 99.4 8.2E-13 2.8E-17 82.9 7.9 82 119-202 12-97 (99)
493 2dav_A SLOW MYBP-C, myosin-bin 99.4 1.4E-12 4.9E-17 84.5 9.0 87 115-203 10-111 (126)
494 1wwc_A Protein (NT-3 growth fa 99.4 1.2E-12 4.1E-17 85.0 8.7 97 2-115 8-104 (118)
495 2edf_A Obscurin; beta-sandwich 99.4 9.6E-13 3.3E-17 83.3 8.0 82 118-206 14-98 (103)
496 2edh_A Obscurin; structural ge 99.4 1.3E-12 4.5E-17 84.1 8.6 95 104-206 9-108 (113)
497 1zxq_A ICAM-2, intercellular a 99.4 9.6E-12 3.3E-16 86.3 13.3 160 3-189 3-172 (192)
498 3irg_A Titin; IG-like, titin, 99.4 9.6E-13 3.3E-17 82.7 7.6 82 119-202 12-98 (100)
499 4f9l_D 20.1 anti-BTN3A1 antibo 99.4 2E-11 6.7E-16 87.2 14.8 173 5-186 4-230 (259)
500 2e6p_A Obscurin-like protein 1 99.4 1.5E-12 5.1E-17 82.5 8.0 78 122-206 20-100 (104)
No 1
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=2.4e-35 Score=222.87 Aligned_cols=230 Identities=23% Similarity=0.384 Sum_probs=187.8
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+.... .+.+. .....++|.|.+
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~---~~~~~-------------~~~~~~~L~i~~ 67 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGG---NYKMT-------------LVENTATLTVLK 67 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSS---SEEEE-------------EETTEEEEEESS
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCC---cEEEE-------------EcCCEEEEEEec
Confidence 47899999999999999999999999988888999999998876541 11111 011245799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc--CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcc
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP--MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRR 158 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~ 158 (258)
+ +..|+|.|+|.+.+..+... ..+.|.|..+|.+.. .....+..|+.+.|.|.+.+.|.+.+.|++++..+.....
T Consensus 68 v-~~~d~G~Y~C~~~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~ 145 (284)
T 2rik_A 68 V-TKGDAGQYTCYASNVAGKDS-CSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSK 145 (284)
T ss_dssp C-CGGGCEEEEEEEEETTEEEE-EEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSS
T ss_pred C-CcccCEEEEEEEEECCceEE-EEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCc
Confidence 9 99999999999999887665 788899988775443 3344678999999999999999999999999988776554
Q ss_pred eEEe---cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCc
Q psy14532 159 QKVF---PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL 235 (258)
Q Consensus 159 ~~~~---~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 235 (258)
.... ....|.|.++.. +|+|.|+|.+.|..+ ..+..+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+
T Consensus 146 ~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~ 222 (284)
T 2rik_A 146 FRMSFVESVAVLEMYNLSV-EDSGDYTCEAHNAAG-SASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECEL-QGTPPF 222 (284)
T ss_dssp EEEEEETTEEEEEECSCCG-GGCEEEEEEEECSSC-EEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEEC-BSSSCC
T ss_pred EEEEEcCCEEEEEECCCCc-ccCEEEEEEEEcCCC-ceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEE-EecCCC
Confidence 4332 234689999997 999999999999887 4567788999999988777777778999999999999 688999
Q ss_pred eeEEEECCEecccccc
Q psy14532 236 TISWLKNGLPILSAMG 251 (258)
Q Consensus 236 ~~~W~~~g~~l~~~~~ 251 (258)
.+.|+++|..+..+..
T Consensus 223 ~v~W~~~~~~~~~~~~ 238 (284)
T 2rik_A 223 QVSWHKDKRELRSGKK 238 (284)
T ss_dssp EEEEEETTEEECBTTT
T ss_pred EEEEEECCEECcCCCC
Confidence 9999999999987654
No 2
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=220.40 Aligned_cols=228 Identities=24% Similarity=0.433 Sum_probs=173.2
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeee---CCcEE
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP---NGTLL 77 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ 77 (258)
.||.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+... +.... ... ..+|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~----~~~~~--------------~~~~~~~~~L~ 66 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ----RFETI--------------EFDESAGAVLR 66 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT----TEEEE--------------EETTTTEEEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC----ceEEE--------------EecCCCceEEE
Confidence 3789999999999999999999999999888999999998876432 11100 001 14699
Q ss_pred EeecccC-CCceEEEEEEEeCCcceeeceEEEEEecC-------Ceec-cCCCcceecCCcEEEEeeeCcccCceEEEEe
Q psy14532 78 IENVQKD-HDRGVYWCTATNKQGRSSSQNVHISVTGA-------PFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQK 148 (258)
Q Consensus 78 i~~~~~~-~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~ 148 (258)
|.++ +. .|+|.|+|.+.+..+... ..+.|.|... |.+. .+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 67 i~~~-~~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k 144 (304)
T 2yd9_A 67 IQPL-RTPRDENVYECVAQNSVGEIT-VHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFK 144 (304)
T ss_dssp ECSC-CTTTTCSEEEEEEECSSCEEC-CEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEE
T ss_pred Eecc-cccCCCeEEEEEEECCCCeEE-EEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEE
Confidence 9999 87 999999999999888755 7888888764 2222 2445567889999999999999999999999
Q ss_pred CCcccCCCc---ceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee---cCCccccCCCCCccCCCCee
Q psy14532 149 GVQQLPLNR---RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT---VPPKIAPFEFQPDLHSGDRA 222 (258)
Q Consensus 149 ~~~~~~~~~---~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~ 222 (258)
++..+.... +.....++.|.|.++.. +|+|.|+|.+.|..+...+....|.|. .+|.+...+....+..|+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v 223 (304)
T 2yd9_A 145 DFLPVDPSASNGRIKQLRSGALQIESSEE-TDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNV 223 (304)
T ss_dssp TTEECCGGGGTTSEEECTTSCEEECSCCG-GGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCE
T ss_pred CCEECcCCCCcceEEeCCCeEEEEccCCc-ccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeE
Confidence 998775432 33445677899999997 999999999999887544443555553 35555555656678899999
Q ss_pred eEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 223 GVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 223 ~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
.|.|.+ .+.|.+.|.|+++|..+..+.
T Consensus 224 ~l~C~~-~g~p~p~v~W~~~~~~l~~~~ 250 (304)
T 2yd9_A 224 NITCVA-VGSPMPYVKWMQGAEDLTPED 250 (304)
T ss_dssp EEEEEE-EEESCCEEEEEETTEECSCSS
T ss_pred EEEEEE-eeeCCCEEEEEECCEECCCcc
Confidence 999999 688999999999999997654
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=7.7e-34 Score=234.05 Aligned_cols=229 Identities=23% Similarity=0.382 Sum_probs=186.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.+...+.+..+.+|++++|.|.+.+.|.+.+.|+|++..+... .++.+. .....++|.|.++
T Consensus 197 pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~---~~~~~~-------------~~~~~~~L~i~~v 260 (570)
T 3b43_A 197 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPG---GNYKMT-------------LVENTATLTVLKV 260 (570)
T ss_dssp CCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTT---SSEEEE-------------EETTEEEEEESSB
T ss_pred CCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCC---CcEEEE-------------EECCEEEEEEccc
Confidence 566777777888999999999999999988999999999887544 111111 0012357999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc--CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcce
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP--MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~ 159 (258)
+.+|+|.|+|.+.|..|... ..+.|.|..+|.+.. .....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+.
T Consensus 261 -~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~ 338 (570)
T 3b43_A 261 -TKGDAGQYTCYASNVAGKDS-CSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKF 338 (570)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSE
T ss_pred -CcccCEEEEEEEECCCCcEE-EEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcE
Confidence 99999999999999988766 788888887775432 23345789999999999999999999999999888766554
Q ss_pred EEe---cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCce
Q psy14532 160 KVF---PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLT 236 (258)
Q Consensus 160 ~~~---~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 236 (258)
.+. ..+.|.|.++.. +|+|.|+|.|.|..+. .+....|.|..+|.+...+....+.+|+.+.|.|.+ .+.|.+.
T Consensus 339 ~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~-~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~ 415 (570)
T 3b43_A 339 RMSFVESVAVLEMYNLSV-EDSGDYTCEAHNAAGS-ASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECEL-QGTPPFQ 415 (570)
T ss_dssp EEEEETTEEEEEEESCCG-GGCEEEEEEEEBTTBC-CEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEE-ESSSSCC
T ss_pred EEEEECCEEEEEECCCCc-ccCEEEEEEEEeCCCE-EEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEE-ecCCCCE
Confidence 432 234699999997 9999999999999884 556788999999988777777778899999999999 6899999
Q ss_pred eEEEECCEecccccc
Q psy14532 237 ISWLKNGLPILSAMG 251 (258)
Q Consensus 237 ~~W~~~g~~l~~~~~ 251 (258)
+.|+++|..+..+..
T Consensus 416 v~W~k~g~~l~~~~~ 430 (570)
T 3b43_A 416 VSWHKDKRELRSGKK 430 (570)
T ss_dssp CEEEETTEECCSSSS
T ss_pred EEEEECCEECcCCCC
Confidence 999999999976653
No 4
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=212.39 Aligned_cols=232 Identities=23% Similarity=0.401 Sum_probs=178.6
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEee-CCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKL-DGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
.+|++...+.++.+.+|++++|.|.+.+.|. .+.|++ ++..+... .++.+.. .....+|.|.
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~---~~~~~~~-------------~~~~~~L~i~ 65 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST---QRVVVQK-------------EGVRSRLTIY 65 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCB---TTEEEEE-------------ETTEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCC---CcEEEec-------------CCCEEEEEEc
Confidence 3788999999999999999999999998764 899999 56555432 1111110 0012479999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC--C
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL--N 156 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~--~ 156 (258)
++ +..|+|.|+|.+.+..+...+..+.|.|..++.+. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. .
T Consensus 66 ~~-~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~ 144 (291)
T 2wim_A 66 NA-NIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISD 144 (291)
T ss_dssp SC-CGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCC
T ss_pred cC-CcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCC
Confidence 99 99999999999999888765577888888776543 34556788999999999999999999999999877653 3
Q ss_pred cceEEecCCeEEEEecccCCCCcEEEEEEEeCCCC-CccceEEEEeecCCccccCCC--CCccCCCCeeeEEEEeccCCC
Q psy14532 157 RRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGR-SSSQNVHISVTVPPKIAPFEF--QPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 157 ~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~-~~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p 233 (258)
.+.....++.|.|.++.. +|.|.|+|.+.+..+. .....+.+.+..+|.+..... ...+..|+.+.|.|.+ .+.|
T Consensus 145 ~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p 222 (291)
T 2wim_A 145 NRFAMLANNNLQILNINK-SDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSP 222 (291)
T ss_dssp SSEEECTTSCEEETTCCG-GGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBC-CCBS
T ss_pred ceEEEccCCCEEEEecch-hhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEe-ecCC
Confidence 455556778899999997 9999999999988642 234566778888887665433 3467889999999999 6889
Q ss_pred CceeEEEECCEeccccccc
Q psy14532 234 PLTISWLKNGLPILSAMGV 252 (258)
Q Consensus 234 ~~~~~W~~~g~~l~~~~~~ 252 (258)
.+.+.|+++|..+..+..+
T Consensus 223 ~p~v~W~~~g~~~~~~~~~ 241 (291)
T 2wim_A 223 EPAISWFRNGKLIEENEKY 241 (291)
T ss_dssp CCEEEEEETTEECCCTTTE
T ss_pred CCeEEEEECCEECcCCccE
Confidence 9999999999999876543
No 5
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=1.2e-33 Score=214.15 Aligned_cols=233 Identities=24% Similarity=0.368 Sum_probs=180.8
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecC-CCeEEEee-CCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNP-TPHISWKL-DGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
.||++...|.+..+.+|++++|.|.+.+.+ .+.+.|++ ++..+.... .++.+. ......++|.|
T Consensus 1 r~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~--~~~~~~------------~~~~~~~~L~i 66 (291)
T 1qz1_A 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQ--QRISVV------------WNDDDSSTLTI 66 (291)
T ss_dssp -CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSC--SSEEEE------------EEETTEEEEEE
T ss_pred CCcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCC--ceEEEE------------EcCCCeEEEEE
Confidence 478999999999999999999999999875 68999999 676665331 111110 00012457999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC--
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL-- 155 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~-- 155 (258)
.++ +.+|+|.|+|.+.+..+...+..+.|.|..++.+.. +....+.+|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 67 ~~~-~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~ 145 (291)
T 1qz1_A 67 YNA-NIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKK 145 (291)
T ss_dssp CSC-CGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTC
T ss_pred ecC-CCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCC
Confidence 999 999999999999998866555788888887775443 4556788999999999999989899999999887653
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEEeCC-CCCccceEEEEeecCCccccCCC--CCccCCCCeeeEEEEeccCC
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQ-GRSSSQNVHISVTVPPKIAPFEF--QPDLHSGDRAGVQCLVTKGD 232 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~-~~~~~~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~ 232 (258)
..+.....++.|.|.++.. +|+|.|+|.+.+.. +......+.|.|..+|.+..... ...+..|+.+.|.|.+ .+.
T Consensus 146 ~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~-~g~ 223 (291)
T 1qz1_A 146 DVRFIVLSNNYLQIRGIKK-TDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDA-DGF 223 (291)
T ss_dssp CTTEEECTTSCEEETTCCG-GGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEE-EEE
T ss_pred CceEEEccCCcEEEccCcc-ccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEE-EEe
Confidence 2344455677899999997 99999999999875 32334567777777776654332 3467889999999999 588
Q ss_pred CCceeEEEECCEeccccc
Q psy14532 233 PPLTISWLKNGLPILSAM 250 (258)
Q Consensus 233 p~~~~~W~~~g~~l~~~~ 250 (258)
|.+.+.|+++|..+..+.
T Consensus 224 p~p~i~W~~~g~~~~~~~ 241 (291)
T 1qz1_A 224 PEPTMSWTKDGEPIENEE 241 (291)
T ss_dssp SCCEEEEEETTEECCCC-
T ss_pred CCCcEEEEECCEECcCCC
Confidence 999999999999997764
No 6
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=6.9e-33 Score=228.36 Aligned_cols=225 Identities=24% Similarity=0.443 Sum_probs=180.9
Q ss_pred CCcceeece-eeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFI-QQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~-~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|+|++..+.... .+.+. .....+.|.|.+
T Consensus 290 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~---~~~~~-------------~~~~~~~L~i~~ 353 (570)
T 3b43_A 290 PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESS---KFRMS-------------FVESVAVLEMYN 353 (570)
T ss_dssp CCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSS---SEEEE-------------EETTEEEEEEES
T ss_pred CCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCC---cEEEE-------------EECCEEEEEECC
Confidence 566654433 3457899999999999999999999999998876541 11111 011234699999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcce
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~ 159 (258)
+ +.+|+|.|+|.+.|..|... ..+.|.|..+|.+.. +....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++
T Consensus 354 v-~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~ 431 (570)
T 3b43_A 354 L-SVEDSGDYTCEAHNAAGSAS-SSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKY 431 (570)
T ss_dssp C-CGGGCEEEEEEEEBTTBCCE-EEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSE
T ss_pred C-CcccCEEEEEEEEeCCCEEE-EEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCE
Confidence 9 99999999999999998776 778899988876554 44566788999999999999999999999999988776665
Q ss_pred EEecC---CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCce
Q psy14532 160 KVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLT 236 (258)
Q Consensus 160 ~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 236 (258)
.+... ..|.|.++.. +|+|.|+|.|.|..|. ......|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.
T Consensus 432 ~~~~~~~~~~L~i~~v~~-~D~G~Y~C~A~N~~G~-~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~-~g~p~~~ 508 (570)
T 3b43_A 432 KIMSENFLTSIHILNVDS-ADIGEYQCKASNDVGS-DTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATI-EGAEPIS 508 (570)
T ss_dssp EEEEETTEEEEEECSCCG-GGCEEEEEEEECSSCE-EEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEE-ESCSSCC
T ss_pred EEEEcCCEEEEEECCCCh-hhCEEEEEEEEECCCe-EEEEEEEEeccCCcccccCCCceecCCCeEEEEEEE-ecCCCCE
Confidence 55433 3688999997 9999999999999884 446678888889988777777788899999999999 6899999
Q ss_pred eEEEECCEecc
Q psy14532 237 ISWLKNGLPIL 247 (258)
Q Consensus 237 ~~W~~~g~~l~ 247 (258)
+.|+++|..+.
T Consensus 509 v~W~k~~~~~~ 519 (570)
T 3b43_A 509 VAWFKDKGEIV 519 (570)
T ss_dssp CEEEETTEECC
T ss_pred EEEEeCCeEec
Confidence 99999986553
No 7
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-33 Score=220.34 Aligned_cols=231 Identities=29% Similarity=0.494 Sum_probs=184.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.+...+.+..+.+|+++.|.|.+.+.|.+.+.|++++..+.......+ .....+++|.|.++
T Consensus 121 p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~----------------~~~~~~~~L~i~~~ 184 (403)
T 3laf_A 121 PLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSR----------------VVVLPSGALQISRL 184 (403)
T ss_dssp CCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCS----------------EEECTTSCEEECSC
T ss_pred CCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceE----------------EEEcCCceEEEccc
Confidence 45666677778899999999999999888889999999877643211111 12234678999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCee-------ccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFV-------RPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP 154 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~-------~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~ 154 (258)
+.+|+|.|+|.+.+..+......+.+.|...+.. ..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 185 -~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~ 263 (403)
T 3laf_A 185 -QPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQ 263 (403)
T ss_dssp -CGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECC
T ss_pred -ccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeecc
Confidence 9999999999999987765546677787765422 22445667899999999999999999999999988776
Q ss_pred CC-cceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCC
Q psy14532 155 LN-RRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 155 ~~-~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p 233 (258)
.. .......++.|.|.++.. +|+|.|+|.+.|..+ ..+..+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|
T Consensus 264 ~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p 340 (403)
T 3laf_A 264 LRSKKYSLLGGSNLLISNVTD-DDSGTYTCVVTYKNE-NISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAV-SGKP 340 (403)
T ss_dssp CSSSSEEEETTTEEEECSCCG-GGCEEEEEEEEETTE-EEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEE-EEES
T ss_pred CCCceEEECCccEEEEeCCCH-HHCEEEEEEEEcCCC-ceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEE-eecc
Confidence 43 344455677899999997 999999999999876 4567788888888887777767778899999999999 6888
Q ss_pred CceeEEEECCEeccccccc
Q psy14532 234 PLTISWLKNGLPILSAMGV 252 (258)
Q Consensus 234 ~~~~~W~~~g~~l~~~~~~ 252 (258)
.+.|.|+++|..+..+...
T Consensus 341 ~p~v~W~~~g~~~~~~~~~ 359 (403)
T 3laf_A 341 VPTVNWMKNGDVVIPSDYF 359 (403)
T ss_dssp CCEEEEEETTEECCCSSSE
T ss_pred CCEEEEEECCEECCCCCcE
Confidence 8999999999998766543
No 8
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.4e-31 Score=210.46 Aligned_cols=229 Identities=28% Similarity=0.485 Sum_probs=166.3
Q ss_pred CCcceeeceeeee---cCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQQTL---QPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~---~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+|.|...|.+..+ .+|+++.|.|.+.|.|.+.+.|+|+|..+..... .++ ...+++|.|
T Consensus 5 ~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~-~~~-----------------~~~~g~l~i 66 (384)
T 3kld_A 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMD-FRY-----------------SVVDGSLLI 66 (384)
T ss_dssp EEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC-----CE-----------------EEETTEEEE
T ss_pred CCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCC-ccE-----------------EEECCEEEE
Confidence 5788888888776 6899999999999999999999999998764311 111 123567887
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecC--------------------------Ce-----------------
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA--------------------------PF----------------- 115 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~--------------------------~~----------------- 115 (258)
.+..+..|+|.|+|.+.|..|...+....|.+... +.
T Consensus 67 ~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~ 146 (384)
T 3kld_A 67 NNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQ 146 (384)
T ss_dssp ESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCC
T ss_pred cCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEe
Confidence 77536789999999999876653222222222100 00
Q ss_pred -----e---------------------------------------------------------ccCCCcceecCCcEEEE
Q psy14532 116 -----V---------------------------------------------------------RPMGNVSAIAGEPLYLG 133 (258)
Q Consensus 116 -----~---------------------------------------------------------~~~~~~~~~~g~~~~l~ 133 (258)
. ..+....+.+|+.+.|.
T Consensus 147 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~ 226 (384)
T 3kld_A 147 DNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLE 226 (384)
T ss_dssp SSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEE
T ss_pred eccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEE
Confidence 0 00011234568999999
Q ss_pred eeeCcccCceEEEEeCC-cccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCC
Q psy14532 134 CPVAGYPIESITWQKGV-QQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEF 212 (258)
Q Consensus 134 C~~~~~~~~~i~W~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~ 212 (258)
|.+.|.|.+.+.|++++ ..+... ......++.|.|.++.. +|+|.|+|.|.|..+. ......|.|..+|.+...+.
T Consensus 227 C~~~g~P~p~i~W~k~~~~~~~~~-~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~-~~~~~~l~v~~~P~~~~~~~ 303 (384)
T 3kld_A 227 CFALGNPVPTILWRRADGKPIARK-ARRHKSNGILEIPNFQQ-EDAGSYECVAENSRGK-NVAKGQLTFYAQPNWVQIIN 303 (384)
T ss_dssp EEEEEESCCEEEEEETTCCCCCTT-CEECTTSCEEEECSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEECCC
T ss_pred EEEeecCCCcEEEEeCCCcccccc-ceecCCCcEEEECCCCh-hhCEEEEEEEEcCCCe-EEEEEEEEEecCCccccCCC
Confidence 99999999999999954 444332 22233567899999998 9999999999999874 44567788888887766666
Q ss_pred CCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccccc
Q psy14532 213 QPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMGV 252 (258)
Q Consensus 213 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~~ 252 (258)
...+..|+.+.|.|.+ .|.|.+.|.|+++|+.+..+...
T Consensus 304 ~~~v~~g~~v~l~C~~-~g~P~p~i~W~k~g~~l~~~~~~ 342 (384)
T 3kld_A 304 DIHVAMEESVFWECKA-NGRPKPTYRWLKNGDPLLTRDRI 342 (384)
T ss_dssp CEEECTTCCEEEECEE-EEESCCEEEEEETTEECCCBTTE
T ss_pred ceEecCCCCEEEEeEC-CccCCCeEEEEECCEECCCCccE
Confidence 7778999999999999 68999999999999999765543
No 9
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.98 E-value=5.4e-31 Score=199.61 Aligned_cols=210 Identities=18% Similarity=0.262 Sum_probs=167.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.+..+.+|++++|.|.+.+ .+.|++++..+.. .....++|.|.++
T Consensus 12 ~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~~~-----------------------~~~~~~~L~i~~~ 64 (290)
T 2o26_X 12 PPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNEM-----------------------VENKKNEWIQEKA 64 (290)
T ss_dssp CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSSCE-----------------------EEECSSEEEETTC
T ss_pred CCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcceee-----------------------ecCCCceEEEecc
Confidence 688887888899999999999999876 8999998865510 0112368999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCee-ccCCCcceecCCcEEEEeeeCcccC-ceEEEE-eCCcccCCCcc
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFV-RPMGNVSAIAGEPLYLGCPVAGYPI-ESITWQ-KGVQQLPLNRR 158 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~-~~i~W~-~~~~~~~~~~~ 158 (258)
+..|+|.|+|.+.+ +. ...+.|.|..++.. .......+.+|+.+.|.|.+.+ |. +.+.|+ +++..+....+
T Consensus 65 -~~~d~G~Y~C~~~n--g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~ 138 (290)
T 2o26_X 65 -EATRTGTYTCSNSN--GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLT 138 (290)
T ss_dssp -CGGGCEEEEEEESS--SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCE
T ss_pred -CHHhCeEEEEEeeC--Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCc
Confidence 99999999999998 33 36778888766533 3345567889999999999986 77 899995 67887776666
Q ss_pred eEEecCCeEEEEecccCCCCc-EEEEEEEeCCCCCccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCC
Q psy14532 159 QKVFPNGTLLIENVQKDHDRG-VYWCTATNKQGRSSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 159 ~~~~~~~~l~i~~~~~~~~~g-~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p 233 (258)
+....++.|.|.++.. +|.| .|+|.+.|..+...+..+.|.|. .+|.+...+....+.+|+.+.|.|.+. +.|
T Consensus 139 ~~~~~~~~L~i~~v~~-~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~-g~p 216 (290)
T 2o26_X 139 FVPNPKAGITIKNVKR-AYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIK-DVS 216 (290)
T ss_dssp EEEETTTEEEEESCCG-GGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEE-ESS
T ss_pred eeeCCCCCEEEecccH-HHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEe-cCC
Confidence 6677778999999997 9999 99999999865444556777776 567666666666889999999999994 888
Q ss_pred Cce-eEEEECCEec
Q psy14532 234 PLT-ISWLKNGLPI 246 (258)
Q Consensus 234 ~~~-~~W~~~g~~l 246 (258)
.+. +.|+++|..+
T Consensus 217 ~p~~i~W~~~~~~~ 230 (290)
T 2o26_X 217 TSVNSMWLKMNPQP 230 (290)
T ss_dssp TTCEEEEEEESSSE
T ss_pred cceeEEEecCCCCC
Confidence 875 9999998873
No 10
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.98 E-value=3.7e-30 Score=203.61 Aligned_cols=229 Identities=30% Similarity=0.508 Sum_probs=176.1
Q ss_pred CcceeeceeeeecCCCceEEEEEEee-cCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATG-NPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
..+..+|.++.+.+|++++|.|.+.+ .+.+.+.|+|+|..+..... . +.....+++|.|.++
T Consensus 22 ~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~-~----------------~~~~~~~~~l~i~~~ 84 (403)
T 3laf_A 22 LHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMD-D----------------RKQQLPNGSLLIQNI 84 (403)
T ss_dssp SEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSC-T----------------TEEECTTSCEEECSC
T ss_pred EEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCc-c----------------cEEEecCCcEEEeee
Confidence 45677889999999999999999987 57778999999988764311 1 112234667777665
Q ss_pred c----cCCCceEEEEEEEeCC-cceeeceEEEEEecCCeec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC-
Q psy14532 82 Q----KDHDRGVYWCTATNKQ-GRSSSQNVHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP- 154 (258)
Q Consensus 82 ~----~~~d~G~Y~C~~~~~~-~~~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~- 154 (258)
. +.+|+|.|+|.+.+.. +...+..+.|.|..++.+. ......+.+|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 85 ~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~ 164 (403)
T 3laf_A 85 LHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNP 164 (403)
T ss_dssp CCBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCC
T ss_pred eccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccc
Confidence 1 4569999999999654 3333467788887766544 3556778899999999999888989999999988763
Q ss_pred --CCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcccc------CCCCCccCCCCeeeEEE
Q psy14532 155 --LNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAP------FEFQPDLHSGDRAGVQC 226 (258)
Q Consensus 155 --~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~------~~~~~~~~~g~~~~l~C 226 (258)
...+.....++.|.|.++.. +|+|.|+|.+.+..+...+..+.+.+...|.... .+....+.+|+.+.|.|
T Consensus 165 ~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C 243 (403)
T 3laf_A 165 IPGDSRVVVLPSGALQISRLQP-GDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLEC 243 (403)
T ss_dssp CTTCCSEEECTTSCEEECSCCG-GGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECC
T ss_pred cCCceEEEEcCCceEEEccccc-ccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEE
Confidence 33445556678899999997 9999999999998776566677888877765432 23345677899999999
Q ss_pred EeccCCCCceeEEEECCEeccccc
Q psy14532 227 LVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 227 ~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
.+ .+.|.+.+.|+++|..+....
T Consensus 244 ~~-~~~p~~~~~W~~~~~~~~~~~ 266 (403)
T 3laf_A 244 CV-SGYPPPSFTWLRGEEVIQLRS 266 (403)
T ss_dssp EE-EEESCCEEEEEETTEECCCSS
T ss_pred Ec-CCCCCCeEEEEECCeeccCCC
Confidence 99 588888999999999887544
No 11
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=5.9e-32 Score=207.27 Aligned_cols=226 Identities=20% Similarity=0.313 Sum_probs=162.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeec-CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGN-PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.|.. +.+..+.+|++++|.|.+.+. |.+.+.|+|++..+... .++.+. ..+.+|.|.+
T Consensus 7 ~P~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~---~~~~~~---------------~~~~~L~i~~ 67 (317)
T 2y25_A 7 GPHFVE-YLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD---EKHDFK---------------DGICTLLITE 67 (317)
T ss_dssp CCEEEE-EEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCS---CC--------------------CCEEEEETT
T ss_pred CCcEee-eeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCC---CcEEEE---------------CCeEEEEEcc
Confidence 677774 456899999999999999886 77899999999877643 111111 2245899999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCee-ccCCCcceecCCcEEEEeeeCc----------ccCceEEEEeC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFV-RPMGNVSAIAGEPLYLGCPVAG----------YPIESITWQKG 149 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~~~g~~~~l~C~~~~----------~~~~~i~W~~~ 149 (258)
+ +.+|+|.|+|.+.+..+... ..+.|.|...+.+ .......+..|+.+.|.|.+.+ .|.+.+.|+++
T Consensus 68 ~-~~~d~G~Y~C~~~n~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~ 145 (317)
T 2y25_A 68 F-SKKDAGIYEVILKDDRGKDK-SRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHN 145 (317)
T ss_dssp C-CSTTCSCEEEEEESSSCEEE-EEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEES
T ss_pred C-CcccCeEEEEEEECCCCcEE-EEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEEC
Confidence 9 99999999999999887654 4444444432211 1122334556777777777766 67889999999
Q ss_pred CcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec--------------------CCc
Q psy14532 150 VQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV--------------------PPK 206 (258)
Q Consensus 150 ~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~--------------------~p~ 206 (258)
+..+....+......+ .|.|.++.. +|.|.|+|.+.|..+. ....+.|.+.. .|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~ 223 (317)
T 2y25_A 146 GSAIRYSDRVKTGVTGEQIWLQINEPTP-NDKGKYVMELFDGKTG-HQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRAR 223 (317)
T ss_dssp SSBCCCCSSEEEEECSSEEEEEEESCCG-GGCEEEEEEEECSSCE-EEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCE
T ss_pred CEECCCCCCeEEeccCCEEEEEECcCCc-ccCeeEEEEEEeCCce-EEEEEEEeeeeccccchhhcccCCcccCcCCCCc
Confidence 9988766655554433 499999997 9999999999997763 33445554321 111
Q ss_pred c-ccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccccc
Q psy14532 207 I-APFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 207 ~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
+ ...+....+..|+.+.|.|.+ .+.|.+.+.|+++|+.+..+..
T Consensus 224 ~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~i~W~~~g~~~~~~~~ 268 (317)
T 2y25_A 224 VLGGLPDVVTIQEGKALNLTCNV-WGDPPPEVSWLKNEKALASDDH 268 (317)
T ss_dssp EEEBCCSEEEEETTSBBCEEEEE-ECSSCCEEEEEESSSEECCCSS
T ss_pred ccccCCccEEEEcCCEEEEEEEE-ecCCCCEEEEEECCEeCCCCCc
Confidence 1 112334568899999999999 6899999999999999976654
No 12
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.97 E-value=5.2e-30 Score=219.55 Aligned_cols=236 Identities=41% Similarity=0.774 Sum_probs=188.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.+...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ... ......|.|.++
T Consensus 429 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~---~~~~~~~~~----~~~----~~~~~~L~i~~v 497 (816)
T 3dmk_A 429 PPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANN---DRYQVGQYV----TVN----GDVVSYLNITSV 497 (816)
T ss_dssp CCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSC---TTEEEEEEE----CTT----SCEEEEEEESSC
T ss_pred CCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCC---CCcccccEE----ecC----CCcEEEEEEeec
Confidence 677777777788999999999999999999999999999887654 121111000 000 001235899999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEE
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKV 161 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~ 161 (258)
...|+|.|+|.+.|..+... ..+.|.|..+|.+.......+..|+.+.|.|.+.+.|.+.+.|++++..+....+...
T Consensus 498 -~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~ 575 (816)
T 3dmk_A 498 -HANDGGLYKCIAKSKVGVAE-HSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKV 575 (816)
T ss_dssp -CTTTCEEEEEEEEETTEEEE-EEEEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEE
T ss_pred -cccCCEEEEEEEEECCCeEE-EEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEE
Confidence 99999999999999988766 7889999988887777777889999999999999988889999999998887777777
Q ss_pred ecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccC-CCCCccCCCCeeeEEEEeccCCCCceeEEE
Q psy14532 162 FPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPPLTISWL 240 (258)
Q Consensus 162 ~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 240 (258)
..+++|.|.++...+|+|.|+|.+.|..+...+..+.+.+..+|.+... .....+..|+.++|.|.+..+.+++.|.|+
T Consensus 576 ~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~ 655 (816)
T 3dmk_A 576 FPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWT 655 (816)
T ss_dssp CTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEE
T ss_pred ecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEE
Confidence 7889999999973379999999999998865666778888887765543 334567889999999999655666799999
Q ss_pred ECCEeccccc
Q psy14532 241 KNGLPILSAM 250 (258)
Q Consensus 241 ~~g~~l~~~~ 250 (258)
++|+.+....
T Consensus 656 ~~g~~l~~~~ 665 (816)
T 3dmk_A 656 LDGQAISEDL 665 (816)
T ss_dssp ETTBCCCGGG
T ss_pred ECCeEcCCCC
Confidence 9999986554
No 13
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=9.3e-31 Score=198.13 Aligned_cols=220 Identities=19% Similarity=0.298 Sum_probs=167.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.+..+.+|++++|.|.+.+ .+.|++++...... . .....++|.|.++
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~------~---------------~~~~~~~L~i~~~ 58 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTL------D---------------PESPGSTLTTRNA 58 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEE------C---------------CCSSCCEEEESSC
T ss_pred CcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEEE------e---------------ccCCccEEEEeee
Confidence 566777778889999999999999876 49999765321100 0 0112467999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe--eccCCCcceecCCcEEEEeeeCcccCce-EEEEe-CCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF--VRPMGNVSAIAGEPLYLGCPVAGYPIES-ITWQK-GVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~--~~~~~~~~~~~g~~~~l~C~~~~~~~~~-i~W~~-~~~~~~~~~ 157 (258)
+..|+|.|+|.+.+..+... ..+.|.|..++. ........+.+|+.+.|.|.+.+.+.+. +.|++ ++..+....
T Consensus 59 -~~~d~G~Y~C~~~~~~~~~~-~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~ 136 (289)
T 3ejj_X 59 -TFKNTGTYRCTELEDPMAGS-TTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKT 136 (289)
T ss_dssp -CGGGCEEEEEECCC-----C-EEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTC
T ss_pred -ccccCEEEEEEEeccCCcce-eEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCc
Confidence 99999999999998777655 778888886653 3335567788999999999998876654 99987 666666666
Q ss_pred ceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCC
Q psy14532 158 RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 158 ~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p 233 (258)
+.....++.|.|.++.. +|.|.|+|.+.+......+..+.|.|. .+|.+...+....+..|+.+.|.|.+..+.|
T Consensus 137 ~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p 215 (289)
T 3ejj_X 137 VYFFSPWRGFIIRKAKV-LDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEV 215 (289)
T ss_dssp CEEEETTTEEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSS
T ss_pred cEEECCCCCEEEeeccc-ccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCC
Confidence 67777788999999997 999999999995443345677888887 4666665566666788999999999964489
Q ss_pred CceeEEEECCEecccc
Q psy14532 234 PLTISWLKNGLPILSA 249 (258)
Q Consensus 234 ~~~~~W~~~g~~l~~~ 249 (258)
.+.+.|+++|..+...
T Consensus 216 ~~~i~W~~~~~~~~~~ 231 (289)
T 3ejj_X 216 GFNVILKRGDTKLEIP 231 (289)
T ss_dssp CCEEEEEETTEECCCC
T ss_pred ceEEEEEECCEEeecc
Confidence 9999999999988764
No 14
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=3.8e-30 Score=192.05 Aligned_cols=209 Identities=16% Similarity=0.242 Sum_probs=165.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCC-eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTP-HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.|...+.+..+.+|++++|.|.+.+.+.+ .+.|++++..+... +.+|.|.+
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~--------------------------~~~l~i~~ 54 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS--------------------------TPSYRITS 54 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC--------------------------SSEEEESS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc--------------------------CCeEEEec
Confidence 5889899999999999999999999888777 99999999877543 45799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeee-CcccCceEEEEeCCcccCCCcce
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~~~~~~~ 159 (258)
+ +.+|+|.|+|.+.+..+. ..+.|.|..++....+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+...
T Consensus 55 ~-~~~d~G~Y~C~~~~~~~s---~~~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~--- 127 (262)
T 3rjd_A 55 A-SVNDSGEYRCQRGLSGRS---DPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF--- 127 (262)
T ss_dssp C-CGGGCEEEEEEESSSCCC---CCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE---
T ss_pred C-CcccCeEEEEEEecCCcc---ccEEEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc---
Confidence 9 999999999999875432 456778877765555556678899999999999 66788899999998876422
Q ss_pred EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCC-c
Q psy14532 160 KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-L 235 (258)
Q Consensus 160 ~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~ 235 (258)
.....|.|.++.. +|.|.|+|.+.+..+ ..+..+.|.|.. +|.+...+ ...+..|+.+.|.|.+ .+.|. +
T Consensus 128 --~~~~~l~i~~~~~-~d~G~Y~C~~~n~~~-~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~-~~~p~~p 201 (262)
T 3rjd_A 128 --HWNSNLTILKTNI-SHNGTYHCSGMGKHR-YTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCET-KLLLQRP 201 (262)
T ss_dssp --EECCCEEESSCCG-GGCEEEEEEEESSSE-EEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEEC-CCCCC--
T ss_pred --CCCCeEEEEECCh-hhCEEEEEEEeCCCC-ccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEc-ccCCCCC
Confidence 2357899999997 999999999999874 455667777775 33333333 5568889999999999 56654 3
Q ss_pred ----eeEEEECCEecccc
Q psy14532 236 ----TISWLKNGLPILSA 249 (258)
Q Consensus 236 ----~~~W~~~g~~l~~~ 249 (258)
.+.|+++|..+...
T Consensus 202 ~~~~~~~w~~~~~~~~~~ 219 (262)
T 3rjd_A 202 GLQLYFSFYMGSKTLRGR 219 (262)
T ss_dssp ---EEEEEEETTEEEEEE
T ss_pred CccEEEEEEeCCcEeccc
Confidence 47899999988753
No 15
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.97 E-value=8.4e-30 Score=212.92 Aligned_cols=241 Identities=21% Similarity=0.302 Sum_probs=178.3
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccc-eeeccccccceeeeeCCcEEEeeccc
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEA-RVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
+...+.++.+.+|++++|.|...+.+...+.|+|+... ........+..... ......+..|..+..+++|.|.++ +
T Consensus 2 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~-~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~~~sL~I~~v-~ 79 (642)
T 1e07_A 2 LTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERV-DGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNI-I 79 (642)
T ss_pred ceEeccCCcccccccEEEEEccCCCCceEEEEECCccc-CCcceEEEEEccccccccCccccCceeeccCCcEEECCC-C
Confidence 56678889999999999999976666678999995422 21111111111110 112233445666667889999999 9
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEecC---CeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceE
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTGA---PFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQK 160 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~ 160 (258)
.+|+|.|+|.+.+.........+.|.|... |.+.......+..|+.+.|.|.+.+ |.+.+.|++++..+....+..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~ 158 (642)
T 1e07_A 80 QNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQ 158 (642)
T ss_pred cccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEccCceeEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCceE
Confidence 999999999999865433336667777653 3443344456788999999999988 889999999998887666655
Q ss_pred Eec-CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcc-ccCCCCCccCCCCeeeEEEEeccCCCCceeE
Q psy14532 161 VFP-NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKI-APFEFQPDLHSGDRAGVQCLVTKGDPPLTIS 238 (258)
Q Consensus 161 ~~~-~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~-~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 238 (258)
+.. .+.|.|.++.. +|.|.|+|.+.|..+...+..+.|.|..+|.. ...+....+.+|+.+.|.|.+ .+.|.+.+.
T Consensus 159 ~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~-~g~p~~~i~ 236 (642)
T 1e07_A 159 LSNGNRTLTLFNVTR-NDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHA-ASNPPAQYS 236 (642)
T ss_pred EcCCCCEEEEeCCCc-ccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEc-CCCCCcEEE
Confidence 533 56899999997 99999999999988765667788888865543 334555678899999999999 799999999
Q ss_pred EEECCEeccccc
Q psy14532 239 WLKNGLPILSAM 250 (258)
Q Consensus 239 W~~~g~~l~~~~ 250 (258)
|+++|+.+....
T Consensus 237 W~~~g~~i~~~~ 248 (642)
T 1e07_A 237 WFVNGTFQQSTQ 248 (642)
T ss_pred EEECCeEcccCC
Confidence 999999986543
No 16
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=1.9e-31 Score=206.42 Aligned_cols=227 Identities=19% Similarity=0.258 Sum_probs=173.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEe-------ecCCCeEEEeeCCEeCcCCcc-ccceecccceeeccccccceeeeeC
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIAT-------GNPTPHISWKLDGYPLAGDRH-ENKNRIGEARVQQLPLNRRQKVFPN 73 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~-------~~~~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (258)
.|.+...+.++.+.+|++++|.|.+. +.|.+.+.|+|++..+..... ..+ ....+
T Consensus 18 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~-----------------~~~~~ 80 (339)
T 3o4o_C 18 CRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETR-----------------MWAQD 80 (339)
T ss_dssp CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSC-----------------EEEET
T ss_pred hHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCcccccc-----------------EEeeC
Confidence 57788889999999999999999997 778889999999876432211 111 12346
Q ss_pred CcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeec---cCCCcceecCCcEEEEee-----eCcccCceEE
Q psy14532 74 GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR---PMGNVSAIAGEPLYLGCP-----VAGYPIESIT 145 (258)
Q Consensus 74 ~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~---~~~~~~~~~g~~~~l~C~-----~~~~~~~~i~ 145 (258)
++|.|.++ +..|+|.|+|.+.+..+... ..+.|.|...+... ......+..|+.+.|.|. +.+.|.+.+.
T Consensus 81 ~~L~i~~v-~~~D~G~Y~C~~~n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~ 158 (339)
T 3o4o_C 81 GALWLLPA-LQEDSGTYVCTTRNASYCDK-MSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQ 158 (339)
T ss_dssp TEEEESSB-CTTCCEEEECCEEETTEEEE-EEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBC
T ss_pred CeEEECCC-CcccCEEEEEEEECCcceEE-EEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEE
Confidence 78999999 99999999999999887555 77888888765432 123346789999999999 7788889999
Q ss_pred EEeCCcccCCC-cceEEecC-CeEEEEecccCCCCcEEEEEEEeCCCC---CccceEEEEeec-----CCccccCCCCCc
Q psy14532 146 WQKGVQQLPLN-RRQKVFPN-GTLLIENVQKDHDRGVYWCTATNKQGR---SSSQNVHISVTV-----PPKIAPFEFQPD 215 (258)
Q Consensus 146 W~~~~~~~~~~-~~~~~~~~-~~l~i~~~~~~~~~g~y~C~~~~~~~~---~~~~~~~l~v~~-----~p~~~~~~~~~~ 215 (258)
|++++..+... .++....+ +.|.|.++.. +|.|.|+|.+.|..+. ..+..+.|.|.. +|.+...+....
T Consensus 159 W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~ 237 (339)
T 3o4o_C 159 WYKDSLLLDKDNEKFLSVRGTTHLLVHDVAL-EDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTIS 237 (339)
T ss_dssp CEESSCBCCTTCSSEEECTTSSEEEESSCCG-GGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCC
T ss_pred EecCCeeCCCCCceeEEcCCcceEEEcccCH-hhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeE
Confidence 99999887655 33433333 4799999997 9999999999997753 234566777764 334444455567
Q ss_pred cCCCCeeeEEEEec--cCCC-CceeEEEECCEeccc
Q psy14532 216 LHSGDRAGVQCLVT--KGDP-PLTISWLKNGLPILS 248 (258)
Q Consensus 216 ~~~g~~~~l~C~~~--~~~p-~~~~~W~~~g~~l~~ 248 (258)
+..|+.+.|.|.+. .+.| .+.+.|+++|..+..
T Consensus 238 v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~ 273 (339)
T 3o4o_C 238 ASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIES 273 (339)
T ss_dssp CCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSS
T ss_pred eccCCCEEEEEEEECCCCCCCCceEEEEECCeeccc
Confidence 88999999999993 3667 889999999987653
No 17
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=8.9e-31 Score=207.84 Aligned_cols=220 Identities=13% Similarity=0.158 Sum_probs=148.3
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeeccc
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
.++..+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+..... .... .+ ...+|.|.++ +
T Consensus 50 ~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~---~~~~----------~~----~~~sL~I~~v-~ 111 (423)
T 3qs7_E 50 GTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPH---FDLQ----------NR----GVVSMVILKM-T 111 (423)
T ss_dssp ------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCB---C-------------------CEEEEEESSC-C
T ss_pred cceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccce---eccc----------cc----eEEEEEEeec-C
Confidence 455666689999999999999999999999999998876543210 0000 00 1136899999 9
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc---ceE
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR---RQK 160 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~---~~~ 160 (258)
..|+|.|+|.+.|..+... ..+.|.|..+|.+.+..+..+..|+.+.|.|.+.|.|.|.|+|++++....... ...
T Consensus 112 ~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~ 190 (423)
T 3qs7_E 112 ETQAGEYLLFIQSEATNYT-ILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAV 190 (423)
T ss_dssp SSSCSEEEEEEEC--CEEE-EEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------C
T ss_pred cccCEEEEEEEEcCCCcEE-EEEEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCcccccccccc
Confidence 9999999999999988766 778888886665433333345568888999999999999999999877542111 000
Q ss_pred EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEE
Q psy14532 161 VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWL 240 (258)
Q Consensus 161 ~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 240 (258)
+.....+ +. ..|+|.|+|.|.|..|......+.|.|..+|... +....+.+|+.+.|.|.+.+..|.+.|.|+
T Consensus 191 ~~~~~~~----l~-~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~--~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~ 263 (423)
T 3qs7_E 191 VKKEEKV----LH-ELFGTDIRCCARNELGRECTRLFTIDLNQTPQTT--LPQLFLKVGEPLWIRCKAVHVNHGFGLTWE 263 (423)
T ss_dssp EEECCSE----EC-CCCSSCEEEEEECSSCEEEEECEEEESSSCCCSS--TTEEEEETTSCEEEEEEEEESSSCCCEEEE
T ss_pred ccccceE----Ee-cccCeEEEEEEEcCCCCcceeeEEEEEecCCccC--CCceEEeCCCeEEEEEEEEcCCCCcEEEEE
Confidence 1111111 13 3899999999999988655555778887776653 235568889999999999544788999999
Q ss_pred ECCEecccc
Q psy14532 241 KNGLPILSA 249 (258)
Q Consensus 241 ~~g~~l~~~ 249 (258)
++|..+...
T Consensus 264 k~g~~l~~~ 272 (423)
T 3qs7_E 264 LENKALEEG 272 (423)
T ss_dssp ESSSBCCGG
T ss_pred ECCEEcccc
Confidence 999988664
No 18
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.97 E-value=1.6e-29 Score=211.17 Aligned_cols=214 Identities=24% Similarity=0.395 Sum_probs=172.8
Q ss_pred eeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCC
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDH 85 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 85 (258)
...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+.. ...|.|.++ ...
T Consensus 385 ~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~---------------------------~~~L~i~~~-~~~ 436 (642)
T 1e07_A 385 TISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH---------------------------TQELFISNI-TEK 436 (642)
T ss_pred eecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCC---------------------------CceEEEccC-Chh
Confidence 4455667889999999999999999999999999876642 236899999 999
Q ss_pred CceEEEEEEEeCCccee-eceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEE
Q psy14532 86 DRGVYWCTATNKQGRSS-SQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKV 161 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~~~-~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~ 161 (258)
|+|.|+|.+.|..|... +..+.+.|.. +|.+.......+..|+.+.|.|.+.+ |.+.+.|++++..+....+..+
T Consensus 437 d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~ 515 (642)
T 1e07_A 437 NSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQL 515 (642)
T ss_pred hCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEE
Confidence 99999999999886543 2345666653 34444455566789999999999984 7889999999998877666655
Q ss_pred ec-CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc-cccCCCCCccCCCCeeeEEEEeccCCCCceeEE
Q psy14532 162 FP-NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK-IAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISW 239 (258)
Q Consensus 162 ~~-~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 239 (258)
.. ++.|.|.++.. +|.|.|+|.+.|..+...+..+.|.|..+|. +...+....+..|+.+.|.|.+ .+.|.+.|.|
T Consensus 516 ~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~v~W 593 (642)
T 1e07_A 516 SNGNRTLTLFNVTR-NDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHS-ASNPSPQYSW 593 (642)
T ss_pred cCCCcEEEEeecCh-hcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEe-ccCCCCeEEE
Confidence 43 45899999997 9999999999999886666678888887654 4444556778899999999999 6899999999
Q ss_pred EECCEeccccc
Q psy14532 240 LKNGLPILSAM 250 (258)
Q Consensus 240 ~~~g~~l~~~~ 250 (258)
+++|..+..+.
T Consensus 594 ~~~g~~i~~~~ 604 (642)
T 1e07_A 594 RINGIPQQHTQ 604 (642)
T ss_pred EECCEECccCc
Confidence 99999987654
No 19
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.97 E-value=8.6e-30 Score=201.56 Aligned_cols=230 Identities=23% Similarity=0.390 Sum_probs=170.2
Q ss_pred CCccee-eceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe-
Q psy14532 2 HPQLIY-KFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE- 79 (258)
Q Consensus 2 ~p~~~~-~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~- 79 (258)
||.|.. .+.+..+.+|++++|.|.+.+.|.+.+.|+|++..+..... .+... ...+++|.|.
T Consensus 16 ~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~-~~~~~---------------~~~~~~l~i~~ 79 (404)
T 3p3y_A 16 PPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKD-PRVSM---------------RRRSGTLVIDF 79 (404)
T ss_dssp CCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGC-SSCBC---------------CSSSCCCBCCC
T ss_pred CCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecC-CcceE---------------ecCCceEEEEe
Confidence 677764 46777899999999999999989999999999987754311 11111 1134556554
Q ss_pred ---ecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc--CCCcceecCCcEEEEeee-CcccCceEEEEeCCc-c
Q psy14532 80 ---NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP--MGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQ-Q 152 (258)
Q Consensus 80 ---~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~-~ 152 (258)
++ +.+|+|.|+|.+.+..+...+..+.|.|..++.... .....+.+|+.+.|.|.+ .+.|.+.+.|++++. .
T Consensus 80 ~~~~~-~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~ 158 (404)
T 3p3y_A 80 RSGGR-PEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEP 158 (404)
T ss_dssp TTTCC-TTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCB
T ss_pred ccCCC-CccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccc
Confidence 77 889999999999998887655778888887764432 344678899999999998 778889999999874 3
Q ss_pred cCCCcceEEecCCeEEEEecccCCC-CcEEEEEEEeCCCCCc--cceEEEEeecCC-------ccccCC---CCCccCCC
Q psy14532 153 LPLNRRQKVFPNGTLLIENVQKDHD-RGVYWCTATNKQGRSS--SQNVHISVTVPP-------KIAPFE---FQPDLHSG 219 (258)
Q Consensus 153 ~~~~~~~~~~~~~~l~i~~~~~~~~-~g~y~C~~~~~~~~~~--~~~~~l~v~~~p-------~~~~~~---~~~~~~~g 219 (258)
+....+.....++.|.|.++.. .| +|.|+|.+.+..+... +..+.+.+...+ .+.... ....+..|
T Consensus 159 ~~~~~~~~~~~~~~l~i~~v~~-~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G 237 (404)
T 3p3y_A 159 ITQDKRVSQGHNGDLYFSNVML-QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRG 237 (404)
T ss_dssp CCCCSSEEECTTSCEEESSCCS-GGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETT
T ss_pred cCCCCcEEEcCCCcEEEEeeee-ccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecC
Confidence 4445556666788999999997 77 6999999999876432 333455554322 221111 12357789
Q ss_pred CeeeEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 220 DRAGVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 220 ~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
+.+.|.|.+ .+.|.+.+.|+++|..+....
T Consensus 238 ~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~ 267 (404)
T 3p3y_A 238 MDLLLECIA-SGVPTPDIAWYKKGGDLPSDK 267 (404)
T ss_dssp SCEEEECCB-CCSSCCEEEEEETTBCCCTTT
T ss_pred CCEEEEEEE-CCCCCCcEEEEECCEECCCCc
Confidence 999999999 688999999999999887654
No 20
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=5e-30 Score=197.54 Aligned_cols=235 Identities=18% Similarity=0.269 Sum_probs=156.9
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec-CCCeEEEeeCCEeCcCCc------cccceecccceeeccccccceeeeeCCc
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN-PTPHISWKLDGYPLAGDR------HENKNRIGEARVQQLPLNRRQKVFPNGT 75 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (258)
..|...+.++.+.+|++++|.|.+.+. |.+.+.|+|++....... ...++.... ........+++
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~--------~~~~~~~~~~~ 75 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVS--------ESTKRENMDFS 75 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC-----------CTTCCBCC
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeec--------ccccccCceeE
Confidence 356677888999999999999999887 888999999875321100 000111000 00000023567
Q ss_pred EEEeecccCCCceEEEEEEEeCCcce----eeceEEEEEecCCee--ccCCCcceecCCcEEEEeeeCcccCc--eEEEE
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQGRS----SSQNVHISVTGAPFV--RPMGNVSAIAGEPLYLGCPVAGYPIE--SITWQ 147 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~~~~~--~~~~~~~~~~g~~~~l~C~~~~~~~~--~i~W~ 147 (258)
|.|.++ +.+|+|.|+|.+.+..+.. .+..+.|.|...+.. ...+...+.+|+.+.|.|.+.+.|++ .+.|+
T Consensus 76 L~I~~v-~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~ 154 (327)
T 2wng_A 76 ISISNI-TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWF 154 (327)
T ss_dssp EEECSC-CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEccC-ccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEE
Confidence 999999 9999999999999976531 224567777655421 11234567889999999999987765 89999
Q ss_pred eCCcccCCCcceEEe--c------CCeEEEEecccCCCCcEEEEEEEeCCCCC--ccceEEE--EeecCCccccCCCCCc
Q psy14532 148 KGVQQLPLNRRQKVF--P------NGTLLIENVQKDHDRGVYWCTATNKQGRS--SSQNVHI--SVTVPPKIAPFEFQPD 215 (258)
Q Consensus 148 ~~~~~~~~~~~~~~~--~------~~~l~i~~~~~~~~~g~y~C~~~~~~~~~--~~~~~~l--~v~~~p~~~~~~~~~~ 215 (258)
+++..+......... . ...|.|..... +|.|.|+|.+.|..+.. ......+ .+..+|.+...+..
T Consensus 155 k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~-- 231 (327)
T 2wng_A 155 KNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTRE-DVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP-- 231 (327)
T ss_dssp ETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTT-GGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--
T ss_pred ECCEEccccccccccccCCCceEEEEEEEEechhc-CcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--
Confidence 999887654322111 1 12355555543 66799999999987642 2223333 34556665554433
Q ss_pred cCCCCeeeEEEEeccCCCCc-eeEEEECCEecccc
Q psy14532 216 LHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSA 249 (258)
Q Consensus 216 ~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~ 249 (258)
+.+|+.+.|.|.+.+.+|++ .|.|++||+.+...
T Consensus 232 ~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 266 (327)
T 2wng_A 232 VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTE 266 (327)
T ss_dssp CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEE
T ss_pred cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCc
Confidence 77899999999995335554 89999999998754
No 21
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=6.3e-30 Score=201.79 Aligned_cols=228 Identities=25% Similarity=0.365 Sum_probs=166.7
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEee-cCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATG-NPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
.||.|...+.++.+.+|++++|.|.+.+ .|.+.+.|+|+|..+..... ... ....+++|.|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~--~~~---------------~~~~~~~L~i~ 67 (395)
T 1bih_A 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEH--NAA---------------LRKDEGSLVFL 67 (395)
T ss_dssp CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTT--TEE---------------ECTTSCCEEES
T ss_pred CCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccc--eEE---------------EecCCceEEEe
Confidence 4789988999999999999999999998 78889999999887765421 110 11236789999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEec--CCeeccCCCcceecCCcEEEEeee-CcccCceEEEEeCCc---cc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG--APFVRPMGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQ---QL 153 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~--~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~---~~ 153 (258)
++ +..|+|.|+|.+.+..+...+..+.|.+.. .+.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|++++. ..
T Consensus 68 ~~-~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~-~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~ 145 (395)
T 1bih_A 68 RP-QASDEGHYQCFAETPAGVASSRVISFRKTYLIASPA-KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPN 145 (395)
T ss_dssp SC-CGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCC-EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGG
T ss_pred cC-CCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCc-CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcc
Confidence 99 999999999999998776554445555542 2322 2234567799999999996 678899999999862 11
Q ss_pred C----CCcceEEecCCeEEEEecccCCCCc---EEEEEEEeCCCCCccceEE--EEeecCCc--------cccCCCCCcc
Q psy14532 154 P----LNRRQKVFPNGTLLIENVQKDHDRG---VYWCTATNKQGRSSSQNVH--ISVTVPPK--------IAPFEFQPDL 216 (258)
Q Consensus 154 ~----~~~~~~~~~~~~l~i~~~~~~~~~g---~y~C~~~~~~~~~~~~~~~--l~v~~~p~--------~~~~~~~~~~ 216 (258)
. ...+.....++.|.|.++.. +|.| .|+|.+.+..+........ +.+...+. ....+....+
T Consensus 146 ~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 224 (395)
T 1bih_A 146 ADVTDFDRRITAGPDGNLYFTIVTK-EDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMA 224 (395)
T ss_dssp GCCCCCCTTEEECTTSCEEEEEECG-GGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEE
T ss_pred cccccccccEEEcCCCcEEEEEEee-ccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEE
Confidence 1 13455666778999999997 9999 9999999987743321111 11111110 0002334568
Q ss_pred CCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 217 HSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 217 ~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
..|+.+.|.|.+ .+.|.+.+.|+++|+.+...
T Consensus 225 ~~G~~v~l~C~~-~g~p~~~i~W~~~g~~~~~~ 256 (395)
T 1bih_A 225 KAGDVTMIYCMY-GSNPMGYPNYFKNGKDVNGN 256 (395)
T ss_dssp ETTSCEEEEEEE-ECSSCCCCEEEETTEECCCC
T ss_pred ECCCcEEEEEEe-ccCCCCeEEEEECCEEcCCC
Confidence 899999999999 68899999999999998754
No 22
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.97 E-value=3.1e-30 Score=210.70 Aligned_cols=223 Identities=18% Similarity=0.255 Sum_probs=168.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCe-EEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPH-ISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.+...+.+..+.+|++++|.|.+.+.|.+. +.|++++..+..... ....+. ........++|.|.+
T Consensus 211 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~~L~I~~ 279 (524)
T 2ec8_A 211 VPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEK-YNSWHH----------GDFNYERQATLTISS 279 (524)
T ss_dssp CCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEE-EEEEEC----------SSSCEEEEEEEEESS
T ss_pred CCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccc-cccccc----------cCCccceEEEEEECC
Confidence 67777777888899999999999999988776 999999876311100 111000 001123456899999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccC----CCcceecCCcEEEEeeeCcccCce-EEEEeCCcccCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPM----GNVSAIAGEPLYLGCPVAGYPIES-ITWQKGVQQLPL 155 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~----~~~~~~~g~~~~l~C~~~~~~~~~-i~W~~~~~~~~~ 155 (258)
+ ..+|+|.|+|.+.+..+... ..+.|.|..+|.+... ....+.+|+.+.|.|.+.+.|.+. +.|++++..+..
T Consensus 280 ~-~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~ 357 (524)
T 2ec8_A 280 A-RVNDSGVFMCYANNTFGSAN-VTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTD 357 (524)
T ss_dssp C-CTTTCEEEEEEEECSSCEEE-EEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSS
T ss_pred C-CHHHCEEEEEEEEecCCceE-EEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccC
Confidence 9 99999999999999888777 6889999888765432 346788999999999999999998 999999988766
Q ss_pred Cc-ceEEec-------CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEE
Q psy14532 156 NR-RQKVFP-------NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCL 227 (258)
Q Consensus 156 ~~-~~~~~~-------~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~ 227 (258)
.. ++.... ...|.|.++.. +|+|.|+|.|.|..+. .+..+.|.|..+|.+...+. ...| .|.|.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~~~P~i~~~~~---~~~g---~l~C~ 429 (524)
T 2ec8_A 358 KWEDYPKSENESNIRYVSELHLTRLKG-TEGGTYTFLVSNSDVN-AAIAFNVYVNTKPEILTYDR---LVNG---MLQCV 429 (524)
T ss_dssp SBCCEESCCSSSCCEEEEEEEECSCCG-GGCEEEEEEEECSSCE-EEEEEEEEECEEEEEEEEEC---CSSS---CEEEE
T ss_pred CccceeEEccCCCceeEEEEEEeecCc-ccCeEEEEEEEecCce-EEEEEEEEEecCCeEeeccc---CcCc---EEEEE
Confidence 54 222222 24799999997 9999999999999884 66778888888887655442 3445 99999
Q ss_pred eccCCCCceeEEEECCEec
Q psy14532 228 VTKGDPPLTISWLKNGLPI 246 (258)
Q Consensus 228 ~~~~~p~~~~~W~~~g~~l 246 (258)
+ .|.|.+.|.|+++|..+
T Consensus 430 ~-~g~P~p~i~W~~~~~~~ 447 (524)
T 2ec8_A 430 A-AGFPEPTIDWYFCPGTE 447 (524)
T ss_dssp E-EEESCCEEECCCC----
T ss_pred E-EeecCCEEEEEECCCcc
Confidence 9 68999999999998766
No 23
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=6.4e-30 Score=198.61 Aligned_cols=225 Identities=17% Similarity=0.175 Sum_probs=149.6
Q ss_pred ceeeeecCCCceEEEEEEeecC-----------CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEE
Q psy14532 9 FIQQTLQPGPPVSLKCIATGNP-----------TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~~~~-----------~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
..++.+.+|+++.|.|.+.+.| .+.+.|+|++.......... ...........+++|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~-----------~~~~~~~~~~~~~~L~ 82 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPIN-----------FRLPENRISKEKDVLW 82 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECC-----------CCCGGGCEEEETTEEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCccccccc-----------ccccCceEeecCCEEE
Confidence 4667799999999999988655 38999999873211100000 0000111223467899
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-----CCCcceecCCcEEEEeee-----CcccCceEEEE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-----MGNVSAIAGEPLYLGCPV-----AGYPIESITWQ 147 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-----~~~~~~~~g~~~~l~C~~-----~~~~~~~i~W~ 147 (258)
|.++ +.+|+|.|+|.+.+..+... ..+.|.|..++.... +....+..|+.+.|.|.+ .+.|.+.+.|+
T Consensus 83 i~~~-~~~D~G~Y~C~a~n~~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~ 160 (349)
T 4dep_C 83 FRPT-LLNDTGNYTCMLRNTTYCSK-VAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWY 160 (349)
T ss_dssp ESSC-CGGGCEEEEEEEECSSCEEE-EEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEE
T ss_pred EccC-ChhhCEEEEEEEecCCceEE-EEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEe
Confidence 9999 99999999999999877665 678888876553222 223456789999999975 66788999999
Q ss_pred eCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCC-CCC--ccceEEEEeec------CCccccCCCCC--cc
Q psy14532 148 KGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQ-GRS--SSQNVHISVTV------PPKIAPFEFQP--DL 216 (258)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~-~~~--~~~~~~l~v~~------~p~~~~~~~~~--~~ 216 (258)
+++..+...... ......|.|.++.. +|+|.|+|.+.|.. +.. .+..+.|.|.. +|.+....... .+
T Consensus 161 k~~~~l~~~~~~-~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v 238 (349)
T 4dep_C 161 MGCYKIQNFNNV-IPEGMNLSFLIALI-SNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEK 238 (349)
T ss_dssp ETTEECCSCSSE-EEETTEEEEESCCG-GGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------
T ss_pred eCCEECCCccce-eecCCEEEEeeeee-cCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEE
Confidence 999887554322 23446799999998 99999999999976 432 35667777766 34433332222 67
Q ss_pred CCCCeeeEEEEecc---CCCCceeEEEECCEeccc
Q psy14532 217 HSGDRAGVQCLVTK---GDPPLTISWLKNGLPILS 248 (258)
Q Consensus 217 ~~g~~~~l~C~~~~---~~p~~~~~W~~~g~~l~~ 248 (258)
..|+.+.|.|.+.. +.|.+.+.|+++|..+..
T Consensus 239 ~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 239 EPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp ------CCCEEEEECCCTTCCCEEEEESSCC----
T ss_pred ecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccc
Confidence 88999999999953 478899999999999876
No 24
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.97 E-value=5.6e-30 Score=202.61 Aligned_cols=221 Identities=26% Similarity=0.415 Sum_probs=170.5
Q ss_pred eceeeeecCCCceEEEEEE-eecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCC
Q psy14532 8 KFIQQTLQPGPPVSLKCIA-TGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHD 86 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 86 (258)
.+.+..+.+|++++|.|.+ .+.|.+.+.|++++....... .+ .....+++|.|.++ ...|
T Consensus 122 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~--~~----------------~~~~~~~~l~i~~v-~~~d 182 (404)
T 3p3y_A 122 NLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD--KR----------------VSQGHNGDLYFSNV-MLQD 182 (404)
T ss_dssp CCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCC--SS----------------EEECTTSCEEESSC-CSGG
T ss_pred CCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCC--Cc----------------EEEcCCCcEEEEee-eecc
Confidence 3345778999999999998 677888999999864322210 11 12234678999999 8889
Q ss_pred -ceEEEEEEEeCCccee--eceEEEEEecCC-------eeccC----CCcceecCCcEEEEeeeCcccCceEEEEeCCcc
Q psy14532 87 -RGVYWCTATNKQGRSS--SQNVHISVTGAP-------FVRPM----GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQ 152 (258)
Q Consensus 87 -~G~Y~C~~~~~~~~~~--~~~~~l~v~~~~-------~~~~~----~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~ 152 (258)
+|.|+|.+.+..+... ...+.+.+...+ .+..+ ....+..|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 183 ~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~ 262 (404)
T 3p3y_A 183 MQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGD 262 (404)
T ss_dssp GSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBC
T ss_pred CCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEE
Confidence 5999999998776532 234555664322 11111 124578899999999999999999999999998
Q ss_pred cCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCC
Q psy14532 153 LPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGD 232 (258)
Q Consensus 153 ~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 232 (258)
+..........++.|.|.++.. +|+|.|+|.+.|..+. .+..+.|.|..+|.+...+....+.+|+.+.|.|.+ .+.
T Consensus 263 ~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~-~g~ 339 (404)
T 3p3y_A 263 LPSDKAKFENFNKALRITNVSE-EDSGEYFCLASNKMGS-IRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRA-NGN 339 (404)
T ss_dssp CCTTTEEEEGGGTEEEESSCCG-GGCEEEEEEEECSSCE-EEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEE-EEE
T ss_pred CCCCcccccccCceEEEccCCH-hHCEEEEEEEEeCCCc-EEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEc-ccc
Confidence 8766555455567899999997 9999999999998874 567788889888877777767788999999999999 688
Q ss_pred CCceeEEEECCEeccccc
Q psy14532 233 PPLTISWLKNGLPILSAM 250 (258)
Q Consensus 233 p~~~~~W~~~g~~l~~~~ 250 (258)
|.+.+.|+++|..+....
T Consensus 340 p~p~v~W~~~g~~~~~~~ 357 (404)
T 3p3y_A 340 PKPTVQWMVNGEPLQSAP 357 (404)
T ss_dssp SCCEEEEEETTEEGGGSC
T ss_pred CCCceEEEECCEecCCCC
Confidence 999999999999997654
No 25
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=5.1e-30 Score=197.64 Aligned_cols=216 Identities=21% Similarity=0.274 Sum_probs=157.0
Q ss_pred eeceeeeecCCCceEEEEEEeec---------CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN---------PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~---------~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
....++.+.+|+++.|.|.+.+. +.+.+.|+|++..+... .+ ...+++|.
T Consensus 34 ~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~---~~------------------~~~~~~L~ 92 (329)
T 3oq3_B 34 GGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPL---NR------------------RVKNGDLW 92 (329)
T ss_dssp EEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEEC---ST------------------TEETTEEE
T ss_pred CCcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCcccc---Cc------------------eeecceEE
Confidence 34466779999999999998774 55799999998654321 00 02367899
Q ss_pred EeecccCCCce-EEEEEEEeCCcceeeceEEEEEecCCeec-cCCCcceecCCcEEEEeeeCccc-CceEEEEeCCcccC
Q psy14532 78 IENVQKDHDRG-VYWCTATNKQGRSSSQNVHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGYP-IESITWQKGVQQLP 154 (258)
Q Consensus 78 i~~~~~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~-~~~i~W~~~~~~~~ 154 (258)
|.++ +.+|+| .|+|.+.+..|......+.+.+..++... ......+.+|+.+.|.|.+.+.| .+.+.|++++..+.
T Consensus 93 i~~v-~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~ 171 (329)
T 3oq3_B 93 IANY-TSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELI 171 (329)
T ss_dssp ESSC-CGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECC
T ss_pred EcCC-ChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCC
Confidence 9999 999999 99999999887654233333333333222 22234467799999999999998 89999999998875
Q ss_pred CCcceEEecCCeEEEEecccCCCCcEEEEEEEeC--CCCC---ccceEEEEeecCCccc---cCCCCCccCCCCeeeEEE
Q psy14532 155 LNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNK--QGRS---SSQNVHISVTVPPKIA---PFEFQPDLHSGDRAGVQC 226 (258)
Q Consensus 155 ~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~--~~~~---~~~~~~l~v~~~p~~~---~~~~~~~~~~g~~~~l~C 226 (258)
.........++.|.|.++.. +|+|.|+|.+.|. .+.. .+..+.|.|..+|... ..+....+..|+.+.|.|
T Consensus 172 ~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C 250 (329)
T 3oq3_B 172 IDGTKYSQSGQNLIIHNPEL-EDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITC 250 (329)
T ss_dssp CSSSSEEEETTEEEECSCCG-GGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEE
T ss_pred CCCceEecCCCEEEEeecCh-hhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEE
Confidence 33322223378999999997 9999999999986 4322 1234667787766321 134456788999999999
Q ss_pred EeccCCC---Cc-eeEEEECCEec
Q psy14532 227 LVTKGDP---PL-TISWLKNGLPI 246 (258)
Q Consensus 227 ~~~~~~p---~~-~~~W~~~g~~l 246 (258)
.+. +.| .+ .+.|+++|..+
T Consensus 251 ~~~-g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 251 TAV-STSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp EEE-ETTCCTTCCEEEEECTTSCB
T ss_pred EEE-ECCCCCCCcEEEEEECCeee
Confidence 995 655 66 89999999885
No 26
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=6.3e-30 Score=201.37 Aligned_cols=231 Identities=23% Similarity=0.358 Sum_probs=169.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCC---CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPT---PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+|.+...+.+..+.+|++++|.|.+.+.+. +.+.|++++..+..... .+..+.....+++|.|
T Consensus 103 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~--------------~~~~~~~~~~~~~L~i 168 (388)
T 2v5m_A 103 AQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGA--------------EYDGKYLVLPSGELHI 168 (388)
T ss_dssp CCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSS--------------CBTTTEEECTTSCEEE
T ss_pred ccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCccccccc--------------CCCCcEEEccCCcEEE
Confidence 355555566778899999999999887543 68999998765432210 0112223345678999
Q ss_pred eecccCCCc-eEEEEEEEeCCcceee---ceEEEEEecCC-----eec--cCCCcceecCCcEEEEeeeCcccCceEEEE
Q psy14532 79 ENVQKDHDR-GVYWCTATNKQGRSSS---QNVHISVTGAP-----FVR--PMGNVSAIAGEPLYLGCPVAGYPIESITWQ 147 (258)
Q Consensus 79 ~~~~~~~d~-G~Y~C~~~~~~~~~~~---~~~~l~v~~~~-----~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~ 147 (258)
.++ +.+|+ |.|+|.+.+..+.... ....|.|..+. ... ......+.+|+.+.|.|.+.+.|.+.+.|+
T Consensus 169 ~~v-~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~ 247 (388)
T 2v5m_A 169 REV-GPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWY 247 (388)
T ss_dssp SSC-CGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEE
T ss_pred ecC-CccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEE
Confidence 999 99999 9999999987543221 22345555431 111 123456788999999999999999999999
Q ss_pred eCCcccC------CCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCe
Q psy14532 148 KGVQQLP------LNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDR 221 (258)
Q Consensus 148 ~~~~~~~------~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~ 221 (258)
+++.... ...+.. ..++.|.|.++.. +|+|.|+|.+.|..+. .+..+.|.|..+|.+...+....+..|+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~v~~g~~ 324 (388)
T 2v5m_A 248 KFIEGTTRKQAVVLNDRVK-QVSGTLIIKDAVV-EDSGKYLCVVNNSVGG-ESVETVLTVTAPLSAKIDPPTQTVDFGRP 324 (388)
T ss_dssp EECTTSSCEEECCCSSSEE-EETTEEEESSCCG-GGCEEEEEEEECSSCE-EEEEEEEEEEEEEEEEEESSEEEECTTSC
T ss_pred ecCCCCcccccccccCcee-cccCEEEECcCCH-HHCeEEEEEEecCCCc-eeEEEEEEEeCCCccccCCCcEEecCCCC
Confidence 9754432 122222 3467899999997 9999999999999884 56777888888877666666677899999
Q ss_pred eeEEEEeccCCCCceeEEEECCEecccccc
Q psy14532 222 AGVQCLVTKGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 222 ~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
+.|.|.+ .+.|.+.|.|+++|..+..+..
T Consensus 325 ~~l~C~~-~g~p~p~i~W~~~g~~i~~~~~ 353 (388)
T 2v5m_A 325 AVFTCQY-TGNPIKTVSWMKDGKAIGHSES 353 (388)
T ss_dssp EEEEEEE-EEECCCEEEEEETTEECSCCSS
T ss_pred EEEEEEe-ccccCCeEEEEECCEECccCCC
Confidence 9999999 6889999999999999976544
No 27
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.97 E-value=9.8e-30 Score=181.14 Aligned_cols=185 Identities=30% Similarity=0.423 Sum_probs=148.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.... .++.+. ....+|.|.++
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~--~~~~~~---------------~~~~~L~i~~~ 69 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFD--TRYSIR---------------ENGQLLTILSV 69 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTC--TTEEEE---------------GGGTEEEESSC
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccC--ccEEEc---------------CCccEEEEcCC
Confidence 5778788888899999999999999988888999999998775431 111111 12346999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceE
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQK 160 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~ 160 (258)
+..|+|.|+|.+.+..+......+.|.|..+|.+.. +....+..|+.+.|.|.+.+.|.+.+.|++++..+....+..
T Consensus 70 -~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 148 (192)
T 2iep_A 70 -EDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIA 148 (192)
T ss_dssp -CGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEE
T ss_pred -CcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEE
Confidence 999999999999998776544666777776654443 445678899999999999999999999999999888777777
Q ss_pred EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 161 VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 161 ~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
...++.|.|.++.. +|+|.|+|.+.|..+...+..+.|.|..+|
T Consensus 149 ~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 149 VLESGSLRIHNVQK-EDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp ECTTSCEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EecCCcEEEecCCh-hhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 77888999999997 999999999999988665777888887765
No 28
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=9.4e-30 Score=201.96 Aligned_cols=210 Identities=17% Similarity=0.243 Sum_probs=151.9
Q ss_pred eecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEEEE
Q psy14532 13 TLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWC 92 (258)
Q Consensus 13 ~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C 92 (258)
.+..|+.+.|.|.+.|.|.|.+.|+|++..+........ .+.+....+....|+|.|+|
T Consensus 150 ~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~---------------------~~~~~~~~~l~~~d~G~Y~C 208 (423)
T 3qs7_E 150 FRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESP---------------------AVVKKEEKVLHELFGTDIRC 208 (423)
T ss_dssp EEECSSSSCEEEEEEESSCCEEEEEEC----------------------------------CEEECCSEECCCCSSCEEE
T ss_pred EeccCCceEEEEEEeeecCCeEEEEECCCCCcccccccc---------------------ccccccceEEecccCeEEEE
Confidence 456788999999999999999999998764432100000 00001111115679999999
Q ss_pred EEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCc-ccCceEEEEeCCcccCCCcce---E------Ee
Q psy14532 93 TATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAG-YPIESITWQKGVQQLPLNRRQ---K------VF 162 (258)
Q Consensus 93 ~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~i~W~~~~~~~~~~~~~---~------~~ 162 (258)
.|.|..|......+.|.|...+.. .+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+...... . ..
T Consensus 209 ~A~N~~G~~~~~~~~l~V~~~p~~-~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~ 287 (423)
T 3qs7_E 209 CARNELGRECTRLFTIDLNQTPQT-TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMI 287 (423)
T ss_dssp EEECSSCEEEEECEEEESSSCCCS-STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEE
T ss_pred EEEcCCCCcceeeEEEEEecCCcc-CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeE
Confidence 999998876645577777766544 334567889999999999998 667899999999877543211 1 12
Q ss_pred cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCC--CCCccCCCCeeeEEEEeccCCCCceeEEE
Q psy14532 163 PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFE--FQPDLHSGDRAGVQCLVTKGDPPLTISWL 240 (258)
Q Consensus 163 ~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 240 (258)
..+.|.|.++.. +|+|.|+|.|.|. .+..+.|.|..+|.+...+ ....+.+|+.+.|.|.+ .+.|.+.|.|+
T Consensus 288 ~~~~L~I~~v~~-~D~G~Y~C~A~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~-~g~P~p~i~W~ 361 (423)
T 3qs7_E 288 RILFAFVSSVAR-NDTGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF-KAYPQIRCTWT 361 (423)
T ss_dssp EEEEEEESSCCT-TTCEEEEEEETTE----EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEE-EEESCCEEEEE
T ss_pred EEEEEEEeecCH-HHCEEEEEEEecC----CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEE-EEcCCCeEEEE
Confidence 234699999997 9999999999987 5677888888888765443 24567889999999999 68899999999
Q ss_pred ECCEeccccc
Q psy14532 241 KNGLPILSAM 250 (258)
Q Consensus 241 ~~g~~l~~~~ 250 (258)
++|..|..+.
T Consensus 362 k~g~~l~~~~ 371 (423)
T 3qs7_E 362 FSRKSFPCEQ 371 (423)
T ss_dssp ETTEEEECBC
T ss_pred ECCEECCCcc
Confidence 9999997653
No 29
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=9.1e-30 Score=194.91 Aligned_cols=242 Identities=17% Similarity=0.241 Sum_probs=162.3
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCC-----eEEEeeCCEeCcCCcccc--ceecccceeeccccccceeeeeCCcEE
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTP-----HISWKLDGYPLAGDRHEN--KNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~-----~v~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
++..|.++.+..|++|+|.|.+.+.+.+ .+.|+|++.......... ......................+++|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 4567888999999999999999876544 489999875432110000 000000000000000111122356899
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeC-cccCceEEEEeCCcccCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVA-GYPIESITWQKGVQQLPL 155 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~-~~~~~~i~W~~~~~~~~~ 155 (258)
|.++ +.+|+|.|+|.+.+.........+.|.+...|.... .....+..++.+.+.|.+. +.|.+.+.|++++..+..
T Consensus 83 I~~v-~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~ 161 (313)
T 4fqp_A 83 MFGL-RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPN 161 (313)
T ss_dssp ECSC-CGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEE
T ss_pred ECcC-ChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccc
Confidence 9999 999999999998765544444777777777664433 3445566788889999875 678999999999887654
Q ss_pred CcceEEecCC------eEEEEecccCCCCcEEEEEEEeCCCCC-ccceEEEEeecCCccccCCC-CCccCCCCeeeEEEE
Q psy14532 156 NRRQKVFPNG------TLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHISVTVPPKIAPFEF-QPDLHSGDRAGVQCL 227 (258)
Q Consensus 156 ~~~~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~ 227 (258)
........++ .|.|.+... +|+|.|+|.|.|..+.. ....+.|.|..+|.+...+. ...+..|+.++|.|.
T Consensus 162 ~~~~~~~~~~~~~~~s~l~i~~~~~-~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~ 240 (313)
T 4fqp_A 162 TSQVPGFLSGTVTVTSLWILVPSSQ-VDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCD 240 (313)
T ss_dssp EEEEECSSTTCEEEEEEEEECCCGG-GTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEE
T ss_pred cceeeeecccccccceeeeeccccc-ccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEE
Confidence 3333322332 367777775 89999999999976532 34556677777787654433 344667899999999
Q ss_pred eccCCCCc-eeEEEECCEecccc
Q psy14532 228 VTKGDPPL-TISWLKNGLPILSA 249 (258)
Q Consensus 228 ~~~~~p~~-~~~W~~~g~~l~~~ 249 (258)
+ .|+|.+ .|.|+++|..+...
T Consensus 241 ~-~g~P~p~~v~W~~~~~~l~~~ 262 (313)
T 4fqp_A 241 A-RSNPEPTGYNWSTTMGPLPPF 262 (313)
T ss_dssp E-EEESCCCEEEEEETTBSCCTT
T ss_pred e-cCCCCCcEEEEEECCEECCCc
Confidence 9 588877 79999999988654
No 30
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=1.5e-30 Score=199.34 Aligned_cols=221 Identities=18% Similarity=0.216 Sum_probs=160.5
Q ss_pred ceeeeecCCCceEEEEEEeecC-CCeEEEeeCCEeCcCCc-cccceecccceeeccccccceeeeeCCcEEEeecccCCC
Q psy14532 9 FIQQTLQPGPPVSLKCIATGNP-TPHISWKLDGYPLAGDR-HENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHD 86 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~~~~-~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 86 (258)
...+.+.+|+++.|.|.+.+.+ .+.+.|+|++..+.... ...+ ....+++|.|.++ +.+|
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~-----------------~~~~~~~L~i~~v-~~~D 73 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASR-----------------IHQHKEKLWFVPA-KVED 73 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSS-----------------SEECSSBEECTTC-CGGG
T ss_pred ceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCc-----------------EeccCCeEEECCC-Chhh
Confidence 3457789999999999998876 77999999975432210 0011 1123568999999 9999
Q ss_pred ceEEEEEEEeCCcceeeceEEEEEec-CCeecc----CCCcceecCCcEEEEeee------CcccCceEEEEeCCcccCC
Q psy14532 87 RGVYWCTATNKQGRSSSQNVHISVTG-APFVRP----MGNVSAIAGEPLYLGCPV------AGYPIESITWQKGVQQLPL 155 (258)
Q Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~l~v~~-~~~~~~----~~~~~~~~g~~~~l~C~~------~~~~~~~i~W~~~~~~~~~ 155 (258)
+|.|+|.+.+..+... ..+.+.+.. +|.+.. .....+..|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 74 ~G~Y~C~a~n~~g~~~-~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~ 152 (315)
T 1itb_B 74 SGHYYCVVRNSSYCLR-IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL 152 (315)
T ss_dssp CSCCEECCCSSSCCCC-EECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCC
T ss_pred CEEEEEEEeCCceEEE-EEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCC
Confidence 9999999998876554 444455433 222211 112457789999999998 7889999999999988865
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEE-eCCCCCc--cceEEEEee-----cCCccccCCCC-CccCCCCeeeEEE
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTAT-NKQGRSS--SQNVHISVT-----VPPKIAPFEFQ-PDLHSGDRAGVQC 226 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~-~~~~~~~--~~~~~l~v~-----~~p~~~~~~~~-~~~~~g~~~~l~C 226 (258)
........++.|.|.++.. +|+|.|+|.+. +..+... ...+.+.+. .+|.+...+.. ..+..|+.+.|.|
T Consensus 153 ~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C 231 (315)
T 1itb_B 153 DNIHFSGVKDRLIVMNVAE-KHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLIC 231 (315)
T ss_dssp CSSSEEEETTEEEESSCCG-GGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEE
T ss_pred ccceEeecCceEEEEecee-hhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEE
Confidence 4444455677999999997 99999999999 6666432 233444333 44554433322 4688999999999
Q ss_pred EeccCCCCceeEEEECCEeccccc
Q psy14532 227 LVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 227 ~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
.+ .+.|.+.+.|+++|..+....
T Consensus 232 ~~-~g~P~p~i~W~~~g~~i~~~~ 254 (315)
T 1itb_B 232 NV-TGQLSDIAYWKWNGSVIDEDD 254 (315)
T ss_dssp EE-EECTTSEEEEEETTEECCTTC
T ss_pred EE-ecCCCCeeEEEECCEECCccc
Confidence 99 588999999999999998754
No 31
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=197.32 Aligned_cols=218 Identities=17% Similarity=0.252 Sum_probs=165.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.+..+.+|++++|.|.+.+. +.|++++..... .. .....++|.|.++
T Consensus 4 ~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~--------~~-------------~~~~~~~L~i~~~ 58 (292)
T 4dkd_C 4 IPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPHWT--------LY-------------SDGSSSILSTNNA 58 (292)
T ss_dssp CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSSCE--------EC-------------CBTTEEEEEESSC
T ss_pred CceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCceE--------Ee-------------ccCceEEEEEccc
Confidence 7889888889999999999999998763 999965432110 00 0011347999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe--eccCCCcceecCCcEEEEeeeCcccC--ceEEEEeC-CcccCCC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF--VRPMGNVSAIAGEPLYLGCPVAGYPI--ESITWQKG-VQQLPLN 156 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~--~~~~~~~~~~~g~~~~l~C~~~~~~~--~~i~W~~~-~~~~~~~ 156 (258)
+..|+|.|+|.+.+..+... ..+.|.|..++. ........+.+|+.+.|.|.+.+ +. +.+.|+++ +..+...
T Consensus 59 -~~~d~G~Y~C~~~n~~~~~~-~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~ 135 (292)
T 4dkd_C 59 -TFQNTGTYRCTEPGDPLGGS-AAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRH 135 (292)
T ss_dssp -CGGGCSCEEECCCC----CC-EEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSS
T ss_pred -ccccCEEEEEEEccCCCCcc-eEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccC
Confidence 99999999999998776664 778888877653 33455677889999999999987 43 78999997 5555555
Q ss_pred cceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCC
Q psy14532 157 RRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGD 232 (258)
Q Consensus 157 ~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~ 232 (258)
.+.....++.|.|.++.. +|+|.|+|.+.+..+...+..+.|.|.. +|.+...+....+..|+.+.|.|.+.+..
T Consensus 136 ~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~ 214 (292)
T 4dkd_C 136 TNYSFSPWHGFTIHRAKF-IQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVD 214 (292)
T ss_dssp CCEECCSSSCCEETTCCG-GGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESS
T ss_pred CcccccCCceEEECCCCH-HHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCC
Confidence 556666667799999997 9999999999987765556688888886 77766666666678999999999996445
Q ss_pred CCceeEEEECCEeccc
Q psy14532 233 PPLTISWLKNGLPILS 248 (258)
Q Consensus 233 p~~~~~W~~~g~~l~~ 248 (258)
+.+.+.|++++..+..
T Consensus 215 ~~~~~~w~~~~~~~~~ 230 (292)
T 4dkd_C 215 VNFDVFLQHNNTKLAI 230 (292)
T ss_dssp SCCEEECCBSSCCCCC
T ss_pred CceEEEEeCCCccccc
Confidence 5578999999887653
No 32
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.97 E-value=1.2e-28 Score=178.36 Aligned_cols=190 Identities=27% Similarity=0.474 Sum_probs=146.4
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.... .++.+.. ......+|.|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~~------------~~~~~~~L~i~~ 70 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQ--SRYTVLE------------QPGGISILRIEP 70 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTS--TTEEEEE------------ETTTEEEEEESS
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCc--ceeEEEE------------cCCCeEEEEEEe
Confidence 48999999999999999999999999998889999999998875321 1111110 000114799999
Q ss_pred cccC-CCceEEEEEEEeCCcceeeceEEEEEecC-------Ceec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCc
Q psy14532 81 VQKD-HDRGVYWCTATNKQGRSSSQNVHISVTGA-------PFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ 151 (258)
Q Consensus 81 ~~~~-~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~ 151 (258)
+ +. .|+|.|+|.+.+..+...+..+.|.|... |.+. .+....+..|+.+.|.|.+.+.|.+.+.|++++.
T Consensus 71 v-~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~ 149 (212)
T 2yd1_A 71 V-RAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQT 149 (212)
T ss_dssp C-CTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTE
T ss_pred c-CCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCe
Confidence 9 88 99999999999988874447888888765 3222 2445667889999999999999999999999998
Q ss_pred ccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 152 QLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 152 ~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
.+..........++.|.|.++.. +|.|.|+|.|.|..|...+..+.|.|...+.
T Consensus 150 ~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 150 KVDMSNPRYSLKDGFLQIENSRE-EDQGKYECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp ECCTTSTTEEEETTEEEECSCCG-GGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred EcccCCCeEEccCCeEEEccCCh-hhCEEEEEEeecCCCceeEEEEEEEEEeccc
Confidence 87654333344567999999997 9999999999999986655667888876543
No 33
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=3.4e-29 Score=197.17 Aligned_cols=222 Identities=21% Similarity=0.429 Sum_probs=163.9
Q ss_pred CCcceeecee-eeecCCCceEEEEEEeecCCCeEEEee-CCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQ-QTLQPGPPVSLKCIATGNPTPHISWKL-DGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~-~~~~~g~~v~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.|...|.+ +.+.+|+.++|.|.+.+.|.+.+.|+| ++..+..... ......+++|.|.
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~------------------~~~~~~~~~L~i~ 64 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPG------------------LRQISSDGKLVFP 64 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTT------------------TBEECSTTEEEEC
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCC------------------ceEEcCCceEEec
Confidence 6888877765 457899999999999999999999999 7766643210 0112246789999
Q ss_pred ecccCCC------ceEEEEEEEeCCcceeeceEEEEEecCCeec-cCCCcceecCCcEEEEeeeCccc---CceEEEEeC
Q psy14532 80 NVQKDHD------RGVYWCTATNKQGRSSSQNVHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGYP---IESITWQKG 149 (258)
Q Consensus 80 ~~~~~~d------~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~---~~~i~W~~~ 149 (258)
++ +..| +|.|+|.+.+..+...+..+.|.+..++.+. ......+.+|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 65 ~~-~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~ 143 (388)
T 2v5m_A 65 PF-RAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTD 143 (388)
T ss_dssp CC-CGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEET
T ss_pred cc-ChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeC
Confidence 99 8877 9999999999888755577788887665433 34556788999999999998754 378999998
Q ss_pred CcccCC-----CcceEEecCCeEEEEecccCCCC-cEEEEEEEeCCCCCcc---ceEEEEeecC-----Ccccc-CCCCC
Q psy14532 150 VQQLPL-----NRRQKVFPNGTLLIENVQKDHDR-GVYWCTATNKQGRSSS---QNVHISVTVP-----PKIAP-FEFQP 214 (258)
Q Consensus 150 ~~~~~~-----~~~~~~~~~~~l~i~~~~~~~~~-g~y~C~~~~~~~~~~~---~~~~l~v~~~-----p~~~~-~~~~~ 214 (258)
+..+.. ..+..+..++.|.|.++.. +|. |.|+|.+.+..+.... ....|.|..+ |.+.. .....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~ 222 (388)
T 2v5m_A 144 EEENYFPGAEYDGKYLVLPSGELHIREVGP-EDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPL 222 (388)
T ss_dssp TCCEECSSSCBTTTEEECTTSCEEESSCCG-GGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCE
T ss_pred CCcccccccCCCCcEEEccCCcEEEecCCc-cccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCce
Confidence 876532 3455566778999999997 898 9999999997542221 1234555543 21111 12234
Q ss_pred ccCCCCeeeEEEEeccCCCCceeEEEECCE
Q psy14532 215 DLHSGDRAGVQCLVTKGDPPLTISWLKNGL 244 (258)
Q Consensus 215 ~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~ 244 (258)
.+.+|+.+.|.|.+ .+.|.+.+.|++++.
T Consensus 223 ~v~~G~~v~l~C~~-~g~p~p~v~W~~~~~ 251 (388)
T 2v5m_A 223 ELMVAHTISLLCPA-QGFPAPSFRWYKFIE 251 (388)
T ss_dssp EEETTSCEEECCCC-EEESCCEEEEEEECT
T ss_pred EEeeCCcEEEEEEC-CCCCCCEEEEEecCC
Confidence 57789999999999 588999999999754
No 34
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.97 E-value=2e-29 Score=205.04 Aligned_cols=212 Identities=17% Similarity=0.293 Sum_probs=153.2
Q ss_pred eceeeeecCCCceEEEEEEe-ecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCC
Q psy14532 8 KFIQQTLQPGPPVSLKCIAT-GNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHD 86 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 86 (258)
.+.+..+.+|+++.|.|.+. +.|.+.+.|++++..+..... .... .+.........++|.|.++ +.+|
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~---~~~~-------~~~~~~~~~~~~~L~I~~v-~~~D 301 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNY---FEMS-------TYSTNRTMIRILFAFVSSV-ARND 301 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGE---EEEE-------EEETTTEEEEEEEEEESSC-CGGG
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCce---eeee-------eeccCcceeeEEEEEEccC-Cccc
Confidence 45677899999999999997 788999999999876654311 1000 0000111223457999999 9999
Q ss_pred ceEEEEEEEeCCcceeeceEEEEEecCCeeccC---CCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEec
Q psy14532 87 RGVYWCTATNKQGRSSSQNVHISVTGAPFVRPM---GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFP 163 (258)
Q Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~---~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~ 163 (258)
+|.|+|.+.|. ....+.|.|..++.+... ....+.+|+.+.|.|.+.+.|.|.+.|++++..+....... ..
T Consensus 302 sG~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~-~~ 376 (527)
T 3qs9_E 302 TGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL-DN 376 (527)
T ss_dssp CEEEEEEETTE----EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC-SS
T ss_pred CeEEEEEEEeC----CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc-cC
Confidence 99999999988 337788888877754432 23567889999999999999999999999998876544322 24
Q ss_pred CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECC
Q psy14532 164 NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNG 243 (258)
Q Consensus 164 ~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g 243 (258)
...|.|.++.. +|+|.|+|.|.|..+. ....+.|.|..+|.+...+. | ..|.|.+ .|.|.|.|.|++++
T Consensus 377 ~~~L~I~~v~~-~D~G~YtC~A~N~~g~-~~~~~~L~V~~~P~i~~~~~------~--~~l~C~a-~g~P~p~i~W~~~~ 445 (527)
T 3qs9_E 377 GYSISKFCNHK-HQPGEYIFHAENDDAQ-FTKMFTLNIRRKPQVLAEAS------A--SQASCFS-DGYPLPSWTWKKCS 445 (527)
T ss_dssp SSEEEEECCCT-TCCSCEEEEEEETTEE-EEEEEEEC--CCCEEEECCC------C--E---EEE-ECSSCCEEEEECCC
T ss_pred CcEEEEecCCc-ccCEEEEEEEEeCCCc-EEEEEEEEEecCCeEEEeCC------C--CEEEEEE-EEEcCCeEEEEECC
Confidence 56899999997 9999999999999874 44578888988887654431 2 3579999 69999999999876
Q ss_pred Eec
Q psy14532 244 LPI 246 (258)
Q Consensus 244 ~~l 246 (258)
...
T Consensus 446 ~~~ 448 (527)
T 3qs9_E 446 DKS 448 (527)
T ss_dssp ---
T ss_pred CCc
Confidence 554
No 35
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.97 E-value=3.5e-29 Score=204.50 Aligned_cols=210 Identities=15% Similarity=0.273 Sum_probs=167.0
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|++++|.|.+.+ .+.|+|++..+. .....++|.|.+
T Consensus 35 ~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~------------------------~~~~~~~L~I~~ 86 (524)
T 2ec8_A 35 SPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDET------------------------NENKQNEWITEK 86 (524)
T ss_dssp CCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCC------------------------EEECSSEEEESS
T ss_pred CCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc------------------------ccCccceEEEcc
Confidence 3778877778889999999999999875 899999886541 012357899999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCee-ccCCCcceecCCcEEEEeeeCcccCceEEEEe-CCcccCCCcc
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFV-RPMGNVSAIAGEPLYLGCPVAGYPIESITWQK-GVQQLPLNRR 158 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~-~~~~~~~~~~ 158 (258)
+ +.+|+|.|+|.+.+ +. +..+.|.|..++.. .......+.+|+.+.|.|.+.+.+.+.+.|++ ++..+....+
T Consensus 87 ~-~~~D~G~Y~C~a~n--g~--~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~ 161 (524)
T 2ec8_A 87 A-EATNTGKYTCTNKH--GL--SNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLR 161 (524)
T ss_dssp C-CSTTCEEEEEEETT--SC--EEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCE
T ss_pred c-chhhCEEEEEeecC--Cc--ceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCc
Confidence 9 99999999999998 32 36777888765433 33556778899999999999986668999998 7888877777
Q ss_pred eEEecCCeEEEEecccCCCCc-EEEEEEEeCCCCCccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCC
Q psy14532 159 QKVFPNGTLLIENVQKDHDRG-VYWCTATNKQGRSSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 159 ~~~~~~~~l~i~~~~~~~~~g-~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p 233 (258)
+....++.|.|.++.. +|+| .|+|.+.+..+...+..+.|.|. .+|.+...+....+.+|+.+.|.|.+. +.|
T Consensus 162 ~~~~~~~~L~i~~~~~-~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~-g~p 239 (524)
T 2ec8_A 162 FIPDPKAGIMIKSVKR-AYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIK-DVS 239 (524)
T ss_dssp EEEETTTEEEEESCCG-GGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEE-ESS
T ss_pred eeECCCccEEEeccch-hhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEe-cCC
Confidence 7777788999999997 9999 99999999876555667888886 566666666666789999999999995 777
Q ss_pred Cce-eEEEECCEe
Q psy14532 234 PLT-ISWLKNGLP 245 (258)
Q Consensus 234 ~~~-~~W~~~g~~ 245 (258)
.+. +.|+++|..
T Consensus 240 ~p~~i~W~~~~~~ 252 (524)
T 2ec8_A 240 SSVYSTWKRENSQ 252 (524)
T ss_dssp TTCEEEEEETTCS
T ss_pred CcEEEEEEeCCCC
Confidence 665 999999988
No 36
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=1.5e-29 Score=198.91 Aligned_cols=226 Identities=24% Similarity=0.350 Sum_probs=166.0
Q ss_pred CCcceeeceeeee---cCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQQTL---QPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~---~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+|.|...|.+..+ .+|++++|.|.+.+.|.+.+.|+|+|..+..... .++ ...+++|.|
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~-~~~-----------------~~~~~~L~i 65 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPD-SRY-----------------RLVAGDLVI 65 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTT-SSE-----------------EEETTEEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCC-ccE-----------------EeeCCeEEE
Confidence 6888888888876 7999999999999988899999999988764311 111 123678999
Q ss_pred eecccC-CCceEEEEEEEeCCcceeeceEEEEEecCCeec--cCCCcceecCCcEEEEeee-CcccCceEEEEeCCcccC
Q psy14532 79 ENVQKD-HDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR--PMGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQLP 154 (258)
Q Consensus 79 ~~~~~~-~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~~ 154 (258)
.++ .. .|+|.|+|.+.+..+...+..+.|.|...+... ......+.+|+.+.|.|.+ .+.|.+.+.|++++..+.
T Consensus 66 ~~~-~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~ 144 (382)
T 1cs6_A 66 SNP-VKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNF 144 (382)
T ss_dssp ESC-CHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCB
T ss_pred ecc-cccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccc
Confidence 999 75 999999999999887665456667765443322 2455678899999999996 456888999999987643
Q ss_pred --CCcceEE-ecCCeEEEEecccCCCCcEEEEEEEeCCCCC----ccceEEEEeec------CCcccc-CCCCCccCCCC
Q psy14532 155 --LNRRQKV-FPNGTLLIENVQKDHDRGVYWCTATNKQGRS----SSQNVHISVTV------PPKIAP-FEFQPDLHSGD 220 (258)
Q Consensus 155 --~~~~~~~-~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~----~~~~~~l~v~~------~p~~~~-~~~~~~~~~g~ 220 (258)
...+... ...+.|.|.++.. +|.|.|+|.+.+..+.. .+..+.|.+.. +|.+.. .+....+..|+
T Consensus 145 ~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~ 223 (382)
T 1cs6_A 145 IPADGRRFVSQTTGNLYIAKTEA-SDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQ 223 (382)
T ss_dssp CCCCSSEEECTTTCCEEESSCCG-GGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTC
T ss_pred cccCceEEEecCceEEEEEeeCc-ccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCC
Confidence 2222222 2346899999997 99999999999876321 13344555432 232222 23355678899
Q ss_pred eeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 221 RAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 221 ~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 224 ~v~l~C~~-~g~p~~~i~W~~~~~~~~~ 250 (382)
T 1cs6_A 224 MVTLECFA-FGNPVPQIKWRKLDGSQTS 250 (382)
T ss_dssp CEEEECEE-EEESCCEEEEEECCSCCSC
T ss_pred eEEEEEEE-ccCCCCEEEEEECCccccc
Confidence 99999999 5888899999998877653
No 37
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=1.9e-29 Score=198.26 Aligned_cols=220 Identities=24% Similarity=0.378 Sum_probs=165.1
Q ss_pred ceeeeecCCCceEEEEEE-eecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCc
Q psy14532 9 FIQQTLQPGPPVSLKCIA-TGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDR 87 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 87 (258)
+....+.+|++++|.|.+ .+.|.+.+.|++++..+..... .+.. ....+++|.|.++ +..|+
T Consensus 108 ~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~-~~~~---------------~~~~~~~L~i~~~-~~~d~ 170 (382)
T 1cs6_A 108 RDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPAD-GRRF---------------VSQTTGNLYIAKT-EASDL 170 (382)
T ss_dssp CCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCC-SSEE---------------ECTTTCCEEESSC-CGGGC
T ss_pred CCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccC-ceEE---------------EecCceEEEEEee-CcccC
Confidence 445678899999999985 4567889999998765432111 1110 1112468999999 99999
Q ss_pred eEEEEEEEeCCccee----eceEEEEEec------CCeec--cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC
Q psy14532 88 GVYWCTATNKQGRSS----SQNVHISVTG------APFVR--PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL 155 (258)
Q Consensus 88 G~Y~C~~~~~~~~~~----~~~~~l~v~~------~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~ 155 (258)
|.|+|.+.+..+... +..+.|.+.. +|.+. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 171 G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~ 250 (382)
T 1cs6_A 171 GNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS 250 (382)
T ss_dssp EEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSC
T ss_pred eeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccccc
Confidence 999999998764321 2344555432 12221 23456788999999999999999999999998876543
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCc
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL 235 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 235 (258)
. .......|.|.++.. +|.|.|+|.+.|..+. ....+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+
T Consensus 251 ~---~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p 324 (382)
T 1cs6_A 251 K---WLSSEPLLHIQNVDF-EDEGTYECEAENIKGR-DTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVA-SGKPRP 324 (382)
T ss_dssp C---CSBSSSEEEECSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEE-EEESCC
T ss_pred E---EecCCcEEEEccCCh-hhCEEEEEEEEcCCCe-EEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEe-eeecCC
Confidence 1 123456899999997 9999999999998874 556778888888877666666778899999999999 688999
Q ss_pred eeEEEECCEecccccc
Q psy14532 236 TISWLKNGLPILSAMG 251 (258)
Q Consensus 236 ~~~W~~~g~~l~~~~~ 251 (258)
.+.|+++|..+..+..
T Consensus 325 ~v~W~~~g~~~~~~~~ 340 (382)
T 1cs6_A 325 AVRWLRDGQPLASQNR 340 (382)
T ss_dssp EEEEEETTEECCCCSS
T ss_pred EEEEEECCEECCCCce
Confidence 9999999999987653
No 38
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.97 E-value=1.4e-28 Score=188.64 Aligned_cols=219 Identities=17% Similarity=0.156 Sum_probs=157.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+. ..+.+|++++|.|.+.+. .+.+.|+|++..+.... . .....++|.|.++
T Consensus 24 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~---~-----------------~~~~~~~L~I~~v 81 (316)
T 3vh8_G 24 KPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIF---H-----------------GRIFQESFNMSPV 81 (316)
T ss_dssp CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHH---H-----------------HCCBSSCEEECSC
T ss_pred CCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceee---c-----------------CCcceEEEEECCC
Confidence 678887777 678899999999999877 67899999987643210 0 0113568999999
Q ss_pred ccCCCceEEEEEEEeCCc----ceeeceEEEEEecC---CeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC
Q psy14532 82 QKDHDRGVYWCTATNKQG----RSSSQNVHISVTGA---PFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP 154 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~ 154 (258)
+.+|+|.|+|.+.+... ...+..+.|.|... |.+.......+.+|+.++|.|.+.+ +.+.+.|++++..+.
T Consensus 82 -~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~ 159 (316)
T 3vh8_G 82 -TTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDI-MFEHFFLHKEGISKD 159 (316)
T ss_dssp -CGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESS-CCSEEEEEETTCCSC
T ss_pred -CcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCC-CCcEEEEEECCCccc
Confidence 99999999999986422 12236677777543 3333333344789999999999954 556899999988764
Q ss_pred CCcceEE----ecCCeEEEEecccCCCCcEEEEEEEeCCCCC----ccceEEEEeec---CCccccCCCCCccCCCCeee
Q psy14532 155 LNRRQKV----FPNGTLLIENVQKDHDRGVYWCTATNKQGRS----SSQNVHISVTV---PPKIAPFEFQPDLHSGDRAG 223 (258)
Q Consensus 155 ~~~~~~~----~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~----~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~ 223 (258)
....... ...+.|.|.++.. +|+|.|+|.+.|..+.. .+..+.|.|.. +|.+...+ ...+.+|+.++
T Consensus 160 ~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~ 237 (316)
T 3vh8_G 160 PSRLVGQIHDGVSKANFSIGPMML-ALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQP-GPKVQAGESVT 237 (316)
T ss_dssp CEEEECEEETTEEEEEEEECSCCG-GGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEES-CSCCCTTSCCE
T ss_pred cceeeeeecCCCceEEEEECCCCh-hhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCC-CCeecCCCcEE
Confidence 3221111 1345799999997 99999999999987632 25667777764 33333333 23678899999
Q ss_pred EEEEeccCCCCceeEEEECCEeccc
Q psy14532 224 VQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 224 l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
|.|.+. .|.+.|.|+++|..+..
T Consensus 238 L~C~~~--~~~~~~~W~k~g~~~~~ 260 (316)
T 3vh8_G 238 LSCSSR--SSYDMYHLSREGGAHER 260 (316)
T ss_dssp EEEEES--SCCSEEEEEETTSSCCE
T ss_pred EEEECC--CCCcEEEEEECCCcCCC
Confidence 999994 46789999999988764
No 39
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=3e-29 Score=197.90 Aligned_cols=226 Identities=23% Similarity=0.375 Sum_probs=165.5
Q ss_pred eceeeeecCCCceEEEEEE-eecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCC
Q psy14532 8 KFIQQTLQPGPPVSLKCIA-TGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHD 86 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 86 (258)
.+.+..+.+|+++.|.|.+ .+.|.+.+.|++++........ ...+..+.....+++|.|.++ +..|
T Consensus 106 ~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~------------~~~~~~~~~~~~~~~L~i~~v-~~~d 172 (395)
T 1bih_A 106 KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNAD------------VTDFDRRITAGPDGNLYFTIV-TKED 172 (395)
T ss_dssp EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGC------------CCCCCTTEEECTTSCEEEEEE-CGGG
T ss_pred CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccc------------cccccccEEEcCCCcEEEEEE-eecc
Confidence 3456778899999999996 6788899999997521110000 000111223335678999999 9999
Q ss_pred ce---EEEEEEEeCCcceeeceE--EEEEecC----------CeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCc
Q psy14532 87 RG---VYWCTATNKQGRSSSQNV--HISVTGA----------PFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ 151 (258)
Q Consensus 87 ~G---~Y~C~~~~~~~~~~~~~~--~l~v~~~----------~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~ 151 (258)
+| .|+|.+.+..+....... .+.+... |.+ .+....+.+|+.+.|.|.+.+.|.+.+.|++++.
T Consensus 173 ~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~ 251 (395)
T 1bih_A 173 VSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY-VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGK 251 (395)
T ss_dssp CCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE-ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTE
T ss_pred CCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee-cCCceEEECCCcEEEEEEeccCCCCeEEEEECCE
Confidence 99 999999998776431111 1111111 111 2345678899999999999999999999999998
Q ss_pred ccCCCcceEEe-----cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCC-CccCCCCeeeEE
Q psy14532 152 QLPLNRRQKVF-----PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQ-PDLHSGDRAGVQ 225 (258)
Q Consensus 152 ~~~~~~~~~~~-----~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l~ 225 (258)
.+.......+. ....|.|.++.. +|+|.|+|.+.|..+...+..+.|.|..+|.+...+.. ..+..|+.+.|.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~ 330 (395)
T 1bih_A 252 DVNGNPEDRITRHNRTSGKRLLFKTTLP-EDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIP 330 (395)
T ss_dssp ECCCCTTSSEESCSSSTTSEEEESSCCG-GGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEE
T ss_pred EcCCCCceeEEEEecCCCceEEEccCCh-hhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEE
Confidence 77543322221 122699999997 99999999999998865555888999988887766655 678999999999
Q ss_pred EEeccCCCCceeEEEECCEecccc
Q psy14532 226 CLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 226 C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
|.+ .+.|.+.+.|+++|..+..+
T Consensus 331 C~~-~g~p~p~v~W~~~g~~~~~~ 353 (395)
T 1bih_A 331 CKV-TGLPAPNVVWSHNAKPLSGG 353 (395)
T ss_dssp CEE-EEESCCCCEEEETTEECCSS
T ss_pred EEE-CcccCCeeEEEECCEECCCC
Confidence 999 58899999999999999765
No 40
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=1.3e-30 Score=201.37 Aligned_cols=216 Identities=26% Similarity=0.399 Sum_probs=97.2
Q ss_pred eceeeeecCCCceEEEEEEeec-CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCC
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGN-PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHD 86 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 86 (258)
.+.+..+.+|++++|.|.+.+. |.+.+.|+|++..+... .++.+ .+++|.|.++ +.+|
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~---~~~~~-----------------~~~~L~i~~v-~~~D 72 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPS---ERVLV-----------------GPQRLQVLNA-SHED 72 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCc---ccEEe-----------------ccceEEEeec-cccc
Confidence 4788899999999999999876 57799999998776433 11111 2568999999 9999
Q ss_pred ceEEEEEEEeCCcceeeceEEEEEecCC----------------------eeccC-----CCcceecCCcEEEEeeeCcc
Q psy14532 87 RGVYWCTATNKQGRSSSQNVHISVTGAP----------------------FVRPM-----GNVSAIAGEPLYLGCPVAGY 139 (258)
Q Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~l~v~~~~----------------------~~~~~-----~~~~~~~g~~~~l~C~~~~~ 139 (258)
+|.|+|.+.+. +... ..+.|.|...+ .+..+ ....+..|+.+.|.|.+.+.
T Consensus 73 ~G~Y~C~a~n~-~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~ 150 (334)
T 1ry7_B 73 SGAYSCRQRLT-QRVL-CHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGN 150 (334)
T ss_dssp ------------------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCS
T ss_pred CEEEEEEEEeC-CeEE-EEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCC
Confidence 99999999988 5443 66667765432 21111 12457789999999999999
Q ss_pred cCceEEEEeCCcccCCCcce----EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC----cccc-C
Q psy14532 140 PIESITWQKGVQQLPLNRRQ----KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP----KIAP-F 210 (258)
Q Consensus 140 ~~~~i~W~~~~~~~~~~~~~----~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p----~~~~-~ 210 (258)
|.+.+.|++++..+....+. .......|.|.++.. +|+|.|+|.+.|..+. .+..+.|.|...+ .+.. .
T Consensus 151 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~p~~~~~~ 228 (334)
T 1ry7_B 151 PTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVP-SDRGNYTCVVENKFGS-IRQTYTLDVLERSPHRPILQAGL 228 (334)
T ss_dssp SCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCG-GGCCCEEEEEEETTEE-EEEEEEEEEECCCCSSCBCCTTC
T ss_pred CCCeEEEEECCEECcccccccceecccceEEEEECCCCc-ccCEEEEEEEEeCCCC-EEEEEEEEEecCCCCCCceEecC
Confidence 99999999998877644322 112345799999997 9999999999998763 4566777776532 2221 2
Q ss_pred CCCCccCCCCeeeEEEEeccCCCCceeEEEE----CCEecccc
Q psy14532 211 EFQPDLHSGDRAGVQCLVTKGDPPLTISWLK----NGLPILSA 249 (258)
Q Consensus 211 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~----~g~~l~~~ 249 (258)
+....+..|+.+.|.|.+ .+.|.+.+.|++ +|..+..+
T Consensus 229 ~~~~~~~~G~~v~l~C~~-~g~p~p~v~W~~~~~~~g~~~~~~ 270 (334)
T 1ry7_B 229 PANQTAVLGSDVEFHCKV-YSDAQPHIQWLKHVEVNGSKVGPD 270 (334)
T ss_dssp SCCEEEESSCCEEECCCC-BCSSCEEEEEEECCCGGGCSBCTT
T ss_pred CCceEEeCCCCEEEEEEE-ecCCCCeEEEEECCcCCCccccCC
Confidence 345568889999999999 689999999999 67766543
No 41
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.96 E-value=1.2e-28 Score=211.14 Aligned_cols=218 Identities=27% Similarity=0.482 Sum_probs=172.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.+...+....+.+|++++|.|.+.+.|.+.+.|++++..+... +++|.|.++
T Consensus 343 ~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~--------------------------~~~L~i~~v 396 (816)
T 3dmk_A 343 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS--------------------------ESVLRIESV 396 (816)
T ss_dssp EEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCC--------------------------SSEEEESSC
T ss_pred CCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCC--------------------------CCEEEEcCC
Confidence 345556677788999999999999999999999999999877543 457999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEe---cCCeec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVT---GAPFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+.+|+|.|+|.+.+..+... ..+.|.|. .+|.+. ......+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 397 -~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~ 474 (816)
T 3dmk_A 397 -KKEDKGMYQCFVRNDRESAE-ASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANND 474 (816)
T ss_dssp -CGGGCEEEEEEEECSSCEEE-ECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCT
T ss_pred -CHHHCEEEEEEEECCCCcEE-EEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCC
Confidence 99999999999999887655 55566663 334333 2445678899999999999999999999999998876655
Q ss_pred ceEE----ecCC----eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEec
Q psy14532 158 RQKV----FPNG----TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVT 229 (258)
Q Consensus 158 ~~~~----~~~~----~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 229 (258)
+... ..++ .|.|.++.. +|+|.|+|.+.|..+. ....+.|.|..+|.+.... ...+..|+.+.|.|.+
T Consensus 475 ~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~~~~~-~~~v~~G~~v~l~C~~- 550 (816)
T 3dmk_A 475 RYQVGQYVTVNGDVVSYLNITSVHA-NDGGLYKCIAKSKVGV-AEHSAKLNVYGLPYIRQME-KKAIVAGETLIVTCPV- 550 (816)
T ss_dssp TEEEEEEECTTSCEEEEEEESSCCT-TTCEEEEEEEEETTEE-EEEEEEEEECSSCEECCCC-CEEEETTCCEEEECCE-
T ss_pred CcccccEEecCCCcEEEEEEeeccc-cCCEEEEEEEEECCCe-EEEEEEEEEecCCeeEccC-CeEEecCCeEEEEEEe-
Confidence 4432 1222 588999987 9999999999998873 5567788888887654333 4567889999999999
Q ss_pred cCCCCceeEEEECCEecccccc
Q psy14532 230 KGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 230 ~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
.+.|.+.+.|+++|..+..+..
T Consensus 551 ~g~p~~~i~W~k~~~~l~~~~~ 572 (816)
T 3dmk_A 551 AGYPIDSIVWERDNRALPINRK 572 (816)
T ss_dssp ECSSEEEEEEEETTEESCCSTT
T ss_pred cCCCCCEEEEEECCeEcccCCc
Confidence 6888899999999999876543
No 42
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.96 E-value=2e-28 Score=177.13 Aligned_cols=187 Identities=27% Similarity=0.401 Sum_probs=141.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.+..+.+|+++.|.|.+.+.|.+.+.|++++..+...... ..... ......|.|.++
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~-~~~~~--------------~~~~~~L~i~~v 70 (212)
T 2yd6_A 6 PPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFE-VIEFD--------------DGSGSVLRIQPL 70 (212)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEE-EEEEG--------------GGTEEEEEECSC
T ss_pred CCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCcee-EEEEc--------------CCCceEEEEecc
Confidence 788999999999999999999999999889999999999887643110 00000 001246899999
Q ss_pred cc-CCCceEEEEEEEeCCcceeeceEEEEEecC-------Ceec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcc
Q psy14532 82 QK-DHDRGVYWCTATNKQGRSSSQNVHISVTGA-------PFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQ 152 (258)
Q Consensus 82 ~~-~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~ 152 (258)
. ..|+|.|+|.+.+..+... ..+.|.|... |.+. .+....+..|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 71 -~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~ 148 (212)
T 2yd6_A 71 -RTPRDEAIYECVASNNVGEIS-VSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLP 148 (212)
T ss_dssp -CTTTTCEEEEEEEEETTEEEE-EEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEE
T ss_pred -CCCCCCeEEEEEEEcCCCcEE-EEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCcc
Confidence 6 8999999999999887755 7778888754 2222 23445678899999999999999999999999987
Q ss_pred cCCC---cceEEec---CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 153 LPLN---RRQKVFP---NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 153 ~~~~---~~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
+... .+..... .+.|.|.++.. +|.|.|+|.|.|..|...+..+.|.+..++.
T Consensus 149 l~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~ 207 (212)
T 2yd6_A 149 VDTSNNNGRIKQLRSESIGALQIEQSEE-SDQGKYECVATNSAGTRYSAPANLYVRGTKH 207 (212)
T ss_dssp C------CCEEEEEETTEEEEEECSCCG-GGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred ccCcCCCceEEEEecCCeEEEEEcCCCc-ccCEEEEEEEECCCCccccccccEEEEeccc
Confidence 7643 2222222 36799999997 9999999999999998778888898887764
No 43
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.96 E-value=5.7e-28 Score=174.17 Aligned_cols=198 Identities=18% Similarity=0.291 Sum_probs=144.7
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceec-ccceeeccccccceeeeeCCcEEEeeccc
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRI-GEARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
+...+.+..+.+|++++|.|...+.+.+.+.|++++........ ..+.. .........+..+..+..+++|.|.++ +
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v-~ 79 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEI-ARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMI-T 79 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEE-EEEEGGGTEEEECTTCCSSEEECTTSCEEECSC-C
T ss_pred ccccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceE-EEEecCCCccccCccccceeEEecCCeEEEccc-c
Confidence 45566678899999999999977777889999987543222100 01110 111122233445556667789999999 9
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEecC---CeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceE
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTGA---PFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQK 160 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~ 160 (258)
..|+|.|+|.+.+..+......+.|.|..+ +.+...... +..|+.+.|.|.+.+.| +.+.|++++..+....+..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~-~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~ 157 (208)
T 3r4d_A 80 MKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT-VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMT 157 (208)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS-CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEE
T ss_pred ccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce-EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeE
Confidence 999999999999986544447778888755 333333333 88999999999998865 7999999999887776666
Q ss_pred EecC-CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcc
Q psy14532 161 VFPN-GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKI 207 (258)
Q Consensus 161 ~~~~-~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 207 (258)
+... +.|.|.++.. +|.|.|+|.|.|..+...+..+.|.|..+|..
T Consensus 158 ~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 158 LSQNNSILRIDPIKR-EDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp EETTTTEEEESSCCG-GGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred EcCCCCEEEEeccCH-HhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 6544 7899999997 99999999999999988899999999887754
No 44
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-28 Score=200.43 Aligned_cols=211 Identities=16% Similarity=0.219 Sum_probs=152.9
Q ss_pred eecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEEEE
Q psy14532 13 TLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWC 92 (258)
Q Consensus 13 ~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C 92 (258)
....|+.+.|.|.+.|.|.|.+.|++++..+.... .... .........+ ...|+|.|+|
T Consensus 150 ~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~---~~~~-----------------~~~~~~~~~~-~~~d~G~Y~C 208 (527)
T 3qs9_E 150 FRKMENQDALVCISESVPEPIVEWVLCDSQGESCK---EESP-----------------AVVKKEEKVL-HELFGTDIRC 208 (527)
T ss_dssp EEECSSSSCEEEEEEESSCCEEEEEEC---------------------------------CEEECCSEE-CCCCSSCEEE
T ss_pred EEecCCceEEEEEEceecCCeEEEEECCCCCcccc---ccCC-----------------cEEEEeeeec-cccCCEEEEE
Confidence 34568888999999999999999999876543210 0000 0001112334 6789999999
Q ss_pred EEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeC-cccCceEEEEeCCcccCCCcceE---------Ee
Q psy14532 93 TATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVA-GYPIESITWQKGVQQLPLNRRQK---------VF 162 (258)
Q Consensus 93 ~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~i~W~~~~~~~~~~~~~~---------~~ 162 (258)
.+.|..|......+.|.|...+.. .+....+.+|+.+.|.|.+. +.|.+.+.|++++..+....... ..
T Consensus 209 ~A~N~~G~~~~~~~~l~V~~~p~~-~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~ 287 (527)
T 3qs9_E 209 CARNELGRECTRLFTIDLNQTPQT-TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMI 287 (527)
T ss_dssp EEECSSCEEEEECEEEESSSCCCC-SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEE
T ss_pred EEEeCCCcccceEEEEEEeccCcc-CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCccee
Confidence 999998877655577888766654 44567788999999999996 88999999999998776543221 12
Q ss_pred cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCC--CCCccCCCCeeeEEEEeccCCCCceeEEE
Q psy14532 163 PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFE--FQPDLHSGDRAGVQCLVTKGDPPLTISWL 240 (258)
Q Consensus 163 ~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 240 (258)
..++|.|.++.. +|+|.|+|.|.|. .+..+.|.|..+|.+...+ ....+.+|+.+.|.|.+ .+.|.+.|.|+
T Consensus 288 ~~~~L~I~~v~~-~DsG~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~ 361 (527)
T 3qs9_E 288 RILFAFVSSVAR-NDTGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRF-KAYPQIRCTWT 361 (527)
T ss_dssp EEEEEEESSCCG-GGCEEEEEEETTE----EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEE-EEESCCEEEEE
T ss_pred eEEEEEEccCCc-ccCeEEEEEEEeC----CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEE-EecCCCEEEEE
Confidence 234699999997 9999999999987 4567788888877655433 23567889999999999 68999999999
Q ss_pred ECCEecccccc
Q psy14532 241 KNGLPILSAMG 251 (258)
Q Consensus 241 ~~g~~l~~~~~ 251 (258)
++|+.|..+..
T Consensus 362 k~g~~l~~~~~ 372 (527)
T 3qs9_E 362 FSRKSFPCEQK 372 (527)
T ss_dssp ETTEEEECBCC
T ss_pred ECCEECcCCcc
Confidence 99999976553
No 45
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.96 E-value=8.8e-29 Score=193.22 Aligned_cols=193 Identities=17% Similarity=0.155 Sum_probs=150.3
Q ss_pred eeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEEE
Q psy14532 12 QTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYW 91 (258)
Q Consensus 12 ~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~ 91 (258)
..+.+|++++|.|.+.+.|.+.+.|++++..+ ....++|.|.++ +.+|+|.|+
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~--------------------------~~~~~~L~i~~v-~~~d~G~Y~ 158 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN--------------------------IQGGKTLSVSQL-ELQDSGTWT 158 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCE--------------------------EEESSEEEECSB-CGGGCEECE
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc--------------------------cccceEEEEeeC-ChhcCCEEE
Confidence 46789999999999988888999999986432 123568999999 999999999
Q ss_pred EEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCc-----ccCceEEEEeCCcccCC--------Ccc
Q psy14532 92 CTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAG-----YPIESITWQKGVQQLPL--------NRR 158 (258)
Q Consensus 92 C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~-----~~~~~i~W~~~~~~~~~--------~~~ 158 (258)
|.+.+..+... ..+.|.|..++... ....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.. ...
T Consensus 159 C~a~~~~~~~~-~~~~l~v~~~p~~~--~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~ 235 (363)
T 1wio_A 159 CTVLQNQKKVE-FKIDIVVLAFQKAS--SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKE 235 (363)
T ss_dssp EEEEETTEEEE-ECCEECEECCSCSE--EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSC
T ss_pred EEEecCCCeEE-EEEEEEEecCCCCC--CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCe
Confidence 99998755444 55667776554322 4456788999999998876 77889999999987665 333
Q ss_pred eEEe-----------c--CCeEEEEecccCCCCcEEEEEEEeC--CCCCccceEEEEeecCCccccCCCCCccCCCCeee
Q psy14532 159 QKVF-----------P--NGTLLIENVQKDHDRGVYWCTATNK--QGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAG 223 (258)
Q Consensus 159 ~~~~-----------~--~~~l~i~~~~~~~~~g~y~C~~~~~--~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~ 223 (258)
..+. . ...|.|.++.. +|+|.|+|.|.|. .+ ..+..+.|.|.. ..|+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~g-~~~~~~~l~V~~-------------v~g~~~~ 300 (363)
T 1wio_A 236 VSVKRVTQDPKLQMGKKLPLHLTLPQALP-QYAGSGNLTLALEAKTG-KLHQEVNLVVMR-------------ATQLQKN 300 (363)
T ss_dssp EEEEEEECSSCCBCCSSSSCEEEESSBCG-GGCEEEEEEECBTTTTC-CEEEEEEEEEEE-------------ECCCSSS
T ss_pred eeccccccchhhhcccCCceEEEEccCCc-CcCcEEEEEEEEhhhcC-eEEEEEeEEEEE-------------ecCCCee
Confidence 3331 2 33899999997 9999999999999 77 456667777761 1188999
Q ss_pred EEEEeccCCCCce--eEEEECCEeccccc
Q psy14532 224 VQCLVTKGDPPLT--ISWLKNGLPILSAM 250 (258)
Q Consensus 224 l~C~~~~~~p~~~--~~W~~~g~~l~~~~ 250 (258)
|.|.+ .+.|.+. +.|+++|+.+..+.
T Consensus 301 l~C~~-~g~p~p~~~i~W~~~~~~~~~~~ 328 (363)
T 1wio_A 301 LTCEV-WGPTSPKLMLSLKLENKEAKVSK 328 (363)
T ss_dssp EEEEE-ESSCCTTCCEEEECSSSSCSEEE
T ss_pred EEEEE-ccccCCCccEEEEeCCCceeeee
Confidence 99999 5777777 99999999887544
No 46
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.96 E-value=1.6e-28 Score=177.55 Aligned_cols=194 Identities=27% Similarity=0.505 Sum_probs=143.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC-----cE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG-----TL 76 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l 76 (258)
||.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.......... .....++ .|
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l 74 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSH--------------RMLLPSGSLFFLRI 74 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCS--------------EEECTTSCEEESSC
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccc--------------eEEecCCcEEEEEE
Confidence 6888888999999999999999999988889999999998876442111100 0111122 34
Q ss_pred EEeecccCCCceEEEEEEEeCCcceeeceEEEEEecC--CeeccCCCcceecCCcEEEEeee-CcccCceEEEEeCCccc
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA--PFVRPMGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQL 153 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~--~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~ 153 (258)
.|.++ +..|+|.|+|.+.+..+...+..+.|.|... .....+....+..|+.+.|.|.+ .+.|.+.+.|++++..+
T Consensus 75 ~i~~~-~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l 153 (212)
T 2v9r_A 75 VHGRK-SRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPL 153 (212)
T ss_dssp CCCSS-CCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEE
T ss_pred EecCC-CcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccC
Confidence 55677 8899999999999987765445666776543 23333455678899999999998 88899999999999887
Q ss_pred CCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCC
Q psy14532 154 PLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFE 211 (258)
Q Consensus 154 ~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~ 211 (258)
..........++.|.|.++.. +|.|.|+|.+.|..+...+..+.|.|..+|.+...|
T Consensus 154 ~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 154 DDKDERITIRGGKLMITYTRK-SDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210 (212)
T ss_dssp CTTSTTEEEETTEEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEEC--------
T ss_pred CCCcceEEccCCeEEEeeCCH-hhCeeEEEEEecccCceecceEEEEEEeCchHhhhc
Confidence 755444445677899999997 999999999999988655667899999888766543
No 47
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.96 E-value=1.9e-27 Score=169.76 Aligned_cols=188 Identities=20% Similarity=0.319 Sum_probs=142.8
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEe-ecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIAT-GNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
.+|.|...+.+..+.+|++++|.|.+. +.|.+.+.|+|++..+..... .+..+. ...........+++|.|.
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~-~~~~~~------~~~~~~~~~~~~~~L~i~ 73 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADS-TQTQVP------LGEDEQDDWIVVSQLRIT 73 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEE-EEEEEE------CSSSTTSEEEEEEEEEES
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCC-CceEEE------EccccccceeeccEEEEE
Confidence 378999999999999999999999999 888899999999988765411 011100 000000011114579999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCc-eEEEEeCCcccCCCc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIE-SITWQKGVQQLPLNR 157 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~-~i~W~~~~~~~~~~~ 157 (258)
++ +..|+|.|+|.+.+..+...+..+.|.|..+|.+.. +....+.+|+.+.|.|.+.+.|.+ .+.|++++..+....
T Consensus 74 ~~-~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~ 152 (195)
T 2c5d_C 74 SL-QLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAP 152 (195)
T ss_dssp SC-CSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSST
T ss_pred ec-cccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCC
Confidence 99 999999999999998776655668899988775543 445678889999999999999989 999999998876554
Q ss_pred ceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 158 RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 158 ~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
.. ...+.|.|.++. |+|.|+|.|.|..|...+..+.|.|
T Consensus 153 ~~--~~~~~L~i~~~~---d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 153 GH--GPQRSLHVPGLN---KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp TS--SCCEEEEECCCS---SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred Cc--CCCCeEEEcccc---cCceEEEEEEcCCCceEEEEEEEEE
Confidence 33 355678888764 6899999999998855557777777
No 48
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=1.3e-28 Score=189.80 Aligned_cols=237 Identities=15% Similarity=0.241 Sum_probs=157.0
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec----CCCeEEEeeCC--EeCcCCccccceecccceeeccccccceee----ee
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN----PTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKV----FP 72 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~----~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 72 (258)
+.+...+.++.+.+|++++|.|.+.+. +.+.+.|++++ ...... .+...........+..+..+ ..
T Consensus 15 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~----~~~~~~~~~~~~~~~~r~~~~~~~~~ 90 (331)
T 3u83_A 15 SQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVA----IYNPSMGVSVLAPYRERVEFLRPSFT 90 (331)
T ss_dssp ------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEE----EEETTTEEEECTTCTTTEEESSCSSS
T ss_pred cceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEE----EEeccCCCCcCcccCCceEecccCCC
Confidence 344667788899999999999998765 44579999953 211000 00000000001111222221 23
Q ss_pred CCcEEEeecccCCCceEEEEEEEe-CCcceeeceEEEEEecCCeec---cCCCcceecC---CcEEEEee-eCcccCceE
Q psy14532 73 NGTLLIENVQKDHDRGVYWCTATN-KQGRSSSQNVHISVTGAPFVR---PMGNVSAIAG---EPLYLGCP-VAGYPIESI 144 (258)
Q Consensus 73 ~~~l~i~~~~~~~d~G~Y~C~~~~-~~~~~~~~~~~l~v~~~~~~~---~~~~~~~~~g---~~~~l~C~-~~~~~~~~i 144 (258)
+++|.|.++ +..|+|.|+|.+.+ ..+... ..+.|.|..+|... ......+.+| +.+.|.|. +.+.|.+.+
T Consensus 91 ~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i 168 (331)
T 3u83_A 91 DGTIRLSRL-ELEDEGVYICEFATFPTGNRE-SQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVV 168 (331)
T ss_dssp BCCEEECSC-CGGGCEEEEEEEEEETTEEEE-EEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEE
T ss_pred CceEEEccc-CcccCcEEEEEEEecCCCccE-EEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceE
Confidence 578999999 99999999998554 444444 78888998877542 2445567777 77999998 778899999
Q ss_pred EEEeCCcccCCCcceEEecC------CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCC-CCCccC
Q psy14532 145 TWQKGVQQLPLNRRQKVFPN------GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFE-FQPDLH 217 (258)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~ 217 (258)
.|++++....... .....+ ..|.|.++.. +|+|.|+|.+.|..+ ..+..+.|.|..+|.+...+ ....+.
T Consensus 169 ~W~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~-~~~~~~~l~V~~~P~~~~~~~~~~~~~ 245 (331)
T 3u83_A 169 SWETRLKGEAEYQ-EIRNPNGTVTVISRYRLVPSRE-AHQQSLACIVNYHMD-RFKESLTLNVQYEPEVTIEGFDGNWYL 245 (331)
T ss_dssp EEEESSCCEEEEE-EEECTTSCEEEEEEEEECCCGG-GTTCEEEEEEEETTE-EEEEEEECCEEEEEEEEEECCCSCCBT
T ss_pred EEEcCCCCccccc-eeECCCCcEEEEEEEEEEeccc-cCCCEEEEEEecCCC-cceeeEEEEEecCCeEEEecCCCceEe
Confidence 9999643322111 111122 3466666676 999999999999876 35577778888777765433 344588
Q ss_pred CCCeeeEEEEeccCCCCce-eEEEECCEecccc
Q psy14532 218 SGDRAGVQCLVTKGDPPLT-ISWLKNGLPILSA 249 (258)
Q Consensus 218 ~g~~~~l~C~~~~~~p~~~-~~W~~~g~~l~~~ 249 (258)
.|+.+.|.|.+ .+.|.+. +.|+++|..+...
T Consensus 246 ~g~~~~l~C~~-~g~p~p~~i~W~~~~~~~~~~ 277 (331)
T 3u83_A 246 QRMDVKLTCKA-DANPPATEYHWTTLNGSLPKG 277 (331)
T ss_dssp TCCCEEEEEEE-EEESCCCEEEEEETTBSCCTT
T ss_pred CCCeEEEEEeC-cCCCCCCEEEEEECCCccccc
Confidence 89999999999 6888887 9999999988654
No 49
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.96 E-value=4.6e-27 Score=179.19 Aligned_cols=189 Identities=29% Similarity=0.432 Sum_probs=146.4
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.... .++.+. .......+|.|.+
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~--~~~~~~------------~~~~~~~~L~i~~ 68 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG--LKYRIQ------------EFKGGYHQLIIAS 68 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCS--SSEEEE------------EETTTEEEEEESS
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCC--CeEEEE------------ECCCCEEEEEEcc
Confidence 37999999999999999999999999998889999999998776431 111110 0000123799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc------CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP------MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP 154 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~------~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~ 154 (258)
+ +.+|+|.|+|.+.+..+... ..+.|.|..++.+.. .....+..|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 69 v-~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~ 146 (305)
T 2nzi_A 69 V-TDDDATVYQVRATNQGGSVS-GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLID 146 (305)
T ss_dssp C-CGGGCSEEEEEEEETTEEEE-EEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCC
T ss_pred C-ChhhCeEEEEEEEcCCCCcc-ceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECC
Confidence 9 99999999999999887655 778888876554332 244567889999999999999999999999998887
Q ss_pred CCcceEEe---cCCeEEEEe-cccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcc
Q psy14532 155 LNRRQKVF---PNGTLLIEN-VQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKI 207 (258)
Q Consensus 155 ~~~~~~~~---~~~~l~i~~-~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 207 (258)
...++.+. ....|.|.+ +.. +|.|.|+|.+.|..+. ....+.|.|..+|..
T Consensus 147 ~~~~~~~~~~~~~~~l~i~~~~~~-~d~G~Y~C~a~N~~G~-~~~~~~l~v~~~P~~ 201 (305)
T 2nzi_A 147 NNGHYQVIVTRSFTSLVFPNGVER-KDAGFYVVCAKNRFGI-DQKTVELDVADVPDP 201 (305)
T ss_dssp SSSSCEEEECSSEEEEEETTCCCS-TTCEEEEEEEEETTEE-EEEEEEEEEEBCCCC
T ss_pred CCCcEEEEEcCCceEEEEecCCcc-CccEEEEEEEEeCCCc-eeeEEEEEEecCCCC
Confidence 66555543 234688888 887 9999999999999884 556777888776643
No 50
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.96 E-value=5e-28 Score=185.01 Aligned_cols=217 Identities=14% Similarity=0.196 Sum_probs=153.9
Q ss_pred ceeeeecCCCceEEEEEEe-ecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCc
Q psy14532 9 FIQQTLQPGPPVSLKCIAT-GNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDR 87 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 87 (258)
...+.+.+|+.+.|.|... +.|.+.+.|+|++..+... .++.+.. .....+|.|.++ +.+|+
T Consensus 8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~---~~~~~~~-------------~~~~~~L~I~~~-~~~D~ 70 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDS---PRLEVES-------------KGNKTKMTFKDL-GMDDL 70 (312)
T ss_dssp CCEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTC---TTEEEEE-------------ETTEEEEEESSC-CGGGC
T ss_pred ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCC---CCEEEEE-------------eCCEEEEEECcC-CccCC
Confidence 3456788999999999876 4688899999999987644 2222210 001247999999 99999
Q ss_pred eEEEEEEEeCCcceeeceEEEEEec------------CCeecc-C-CCcceecCCcEEEEeeeC-cccCceEEEEeCCcc
Q psy14532 88 GVYWCTATNKQGRSSSQNVHISVTG------------APFVRP-M-GNVSAIAGEPLYLGCPVA-GYPIESITWQKGVQQ 152 (258)
Q Consensus 88 G~Y~C~~~~~~~~~~~~~~~l~v~~------------~~~~~~-~-~~~~~~~g~~~~l~C~~~-~~~~~~i~W~~~~~~ 152 (258)
|.|+|.+.+..+... .+.+.|.. .|.+.. . ....+.+|+.+.|.|.+. +.|.+.+.|++++..
T Consensus 71 G~Y~C~~~n~~g~~~--s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~ 148 (312)
T 2y23_A 71 GIYSCDVTDTDGIAS--SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKE 148 (312)
T ss_dssp EEEEEEESSSCCCCE--EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEE
T ss_pred EEEEEEEEeCCCcEE--EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEE
Confidence 999999999877443 34455542 332221 2 256778899999999998 789999999999988
Q ss_pred cCCCcceEEecC---C--eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee---------------------cCCc
Q psy14532 153 LPLNRRQKVFPN---G--TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT---------------------VPPK 206 (258)
Q Consensus 153 ~~~~~~~~~~~~---~--~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~---------------------~~p~ 206 (258)
+....++.+..+ + .|.|.++.. +|+|.|+|.+.+... .....+.+. .+|.
T Consensus 149 i~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 224 (312)
T 2y23_A 149 IFEGPKYKMHIDRNTGIIEMFMEKLQD-EDEGTYTFQLQDGKA---TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPH 224 (312)
T ss_dssp ECSSSSCEEEEETTTTEEEEEESCCCG-GGCEEEEEEEESSSC---EEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSE
T ss_pred CeeCCcEEEEEccCCCEEEEEEccCCc-ccCEeEEEEEEeCCc---eEEEEEEEcchhhhhhcccccccccchhhccCCc
Confidence 877665554432 2 399999997 999999999986533 222233331 1122
Q ss_pred cccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEeccccc
Q psy14532 207 IAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSAM 250 (258)
Q Consensus 207 ~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~~ 250 (258)
+.... ...+..|+.+.|.|.+ .+.|.+ .+.|+++|+.+..+.
T Consensus 225 ~~~~~-~~~v~~G~~~~l~C~~-~~~p~~~~v~W~~~g~~~~~~~ 267 (312)
T 2y23_A 225 FVEYL-SWEVTGECNVLLKCKV-ANIKKETHIVWYKDEREISVDE 267 (312)
T ss_dssp EEEEE-EEEEETTTEEEEEEEE-ESCCSSCEEEEEETTEEEEEEC
T ss_pred eeecc-eEEEeCCCEEEEEEEE-cCCCCCCEEEEeeCCEECCCCC
Confidence 22111 2467899999999999 577776 999999999998544
No 51
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.96 E-value=8.4e-28 Score=171.82 Aligned_cols=182 Identities=30% Similarity=0.461 Sum_probs=141.6
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeC--CcEEE
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPN--GTLLI 78 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~i 78 (258)
.||.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.... .++.+. ...+ .+|.|
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~--------------~~~~~~~~L~i 66 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADG--LKYRIQ--------------EFKGGYHQLII 66 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCS--SSEEEE--------------EETTTEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCC--CcEEEE--------------EcCCCEEEEEE
Confidence 47899999999999999999999999998889999999998876431 111111 0112 27999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccC------CCcceecCCcEEEEeeeCcccCceEEEEeCCcc
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPM------GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQ 152 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~------~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~ 152 (258)
.++ +..|+|.|+|.+.+..+... ..+.|.|..++.+..+ ....+..|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 67 ~~~-~~~d~G~Y~C~~~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~ 144 (197)
T 2j8h_A 67 ASV-TDDDATVYQVRATNQGGSVS-GTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDL 144 (197)
T ss_dssp CSC-CGGGCSEEEEEEEETTEEEE-EEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCE
T ss_pred CcC-CHHhCEEEEEEEEECCCcee-EEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEE
Confidence 999 99999999999999877655 7778888766544322 234577899999999999999999999999988
Q ss_pred cCCCcceEEec---CCeEEEEe-cccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 153 LPLNRRQKVFP---NGTLLIEN-VQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 153 ~~~~~~~~~~~---~~~l~i~~-~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
+....++.+.. .+.|.|.+ +.. +|.|.|+|.|.|..+. .+..+.|.|.
T Consensus 145 ~~~~~~~~~~~~~~~~~L~i~~~~~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 196 (197)
T 2j8h_A 145 IDNNGHYQVIVTRSFTSLVFPNGVER-KDAGFYVVCAKNRFGI-DQKTVELDVA 196 (197)
T ss_dssp ECSSSSCEEEECSSEEEEECTTCCCG-GGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred eecCCCEEEEEcCCceEEEEeCCCCc-ccCEeEEEEEEeCCCc-EeEEEEEEEe
Confidence 87665555432 34788888 887 9999999999999874 4566666654
No 52
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.96 E-value=1.9e-27 Score=194.20 Aligned_cols=234 Identities=17% Similarity=0.294 Sum_probs=155.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCC--eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTP--HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.+...+....+.+|++++|.|.+.+.+.+ .+.|+|+|..+............ ..........|.|.
T Consensus 114 ~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~----------~~~~~~~~s~L~i~ 183 (523)
T 2rcj_C 114 NPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQ----------SNNKYAASSYLSLT 183 (523)
T ss_pred CCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEecccccc----------CCCCEEEEEEEEEe
Confidence 5666666666677889999999999987553 99999999877543110000000 00011112468999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEE----ecCCeec-cCCCcceecCCcEEEEeeeCcc-cCc-eEEEEeCCcc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISV----TGAPFVR-PMGNVSAIAGEPLYLGCPVAGY-PIE-SITWQKGVQQ 152 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v----~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W~~~~~~ 152 (258)
++ +.+|+|.|+|.+.+..+... ..+.+.+ ..+|.+. ......+.+|+.+.|.|.+.+. |.+ .+.|++++..
T Consensus 184 ~~-~~~d~G~Y~C~a~n~~~~~~-~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~ 261 (523)
T 2rcj_C 184 PE-QWKSHRSYSCQVTHEGSTVE-KTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALT 261 (523)
T ss_pred ch-hcCCCceEEEEEEecCcccc-cceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcc
Confidence 99 99999999999999876554 3343322 1233332 2233456789999999999886 767 8999999876
Q ss_pred cCCCcce-EEec------CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccC-CCCCc-cCCCCeee
Q psy14532 153 LPLNRRQ-KVFP------NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPF-EFQPD-LHSGDRAG 223 (258)
Q Consensus 153 ~~~~~~~-~~~~------~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~-~~~g~~~~ 223 (258)
+...... .... ...|.|.++.. +| |.|+|.|.|..+. ......|.+...|.+... +.... +.+|+.+.
T Consensus 262 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d-G~Y~C~a~n~~g~-~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~ 338 (523)
T 2rcj_C 262 SGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPSN-TKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPE 338 (523)
T ss_pred cceEeCCcEecCCCcEEEEEEEEechhhc-CC-ceEEEEEEeCCCC-cceEEecCCCcCceEEecCCCchhhcccCCceE
Confidence 5321111 1112 23789999987 88 9999999999874 334455555555544332 22233 78899999
Q ss_pred EEEEeccCCCC---ceeEEEECCEeccccc
Q psy14532 224 VQCLVTKGDPP---LTISWLKNGLPILSAM 250 (258)
Q Consensus 224 l~C~~~~~~p~---~~~~W~~~g~~l~~~~ 250 (258)
|.|.+.+..|. +.|.|+++|+.+....
T Consensus 339 l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~ 368 (523)
T 2rcj_C 339 VTCVVVDVSHEDPQVKFNWYVDGVQVHNAK 368 (523)
T ss_pred EEEEEecccCCCCceEEEEEECCeEccCCc
Confidence 99999533333 6999999999987554
No 53
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.96 E-value=1.2e-27 Score=170.57 Aligned_cols=182 Identities=21% Similarity=0.354 Sum_probs=139.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+..... .+..+. ......+|.|.++
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~-------------~~~~~~~L~i~~~ 70 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTL-PGVQIS-------------FSDGRAKLTIPAV 70 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTS-TTCEEE-------------EETTEEEEEESSC
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccC-CceEEE-------------eCCCEEEEEECCC
Confidence 68888888999999999999999999988889999999877654421 011110 0011347999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEec---CCee-ccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFV-RPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+..|+|.|+|.+.+..+... ..+.|.|.. +|.+ .......+..|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 71 -~~~d~G~Y~C~~~n~~~~~~-~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~ 148 (194)
T 2a38_A 71 -TKANSGRYSLKATNGSGQAT-STAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSL 148 (194)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSS
T ss_pred -CcccCEEEEEEEEcCCceEe-EEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCC
Confidence 99999999999999887665 666777763 3322 23445678899999999999999999999999998887666
Q ss_pred ceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 158 RQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 158 ~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
+..+..++ .|.|.++.. +|.|.|+|.|.|..+. ....+.|.|
T Consensus 149 ~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V 193 (194)
T 2a38_A 149 DFQISQEGDLYSLLIAEAYP-EDSGTYSVNATNSVGR-ATSTAELLV 193 (194)
T ss_dssp SEEEEEETTEEEEEEEEECG-GGCEEEEEEEEETTEE-EEEEEEEEE
T ss_pred cEEEEEcCCEEEEEECCCCh-hcCeEEEEEEEeCCCc-eEEEEEEEE
Confidence 65554443 699999997 9999999999999874 445555554
No 54
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.7e-27 Score=169.09 Aligned_cols=182 Identities=24% Similarity=0.416 Sum_probs=137.0
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
++|.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+..... . +.....+++|.|.+
T Consensus 1 s~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~-~----------------~~~~~~~~~L~i~~ 63 (189)
T 2v5t_A 1 SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISD-N----------------RFAMLANNNLQILN 63 (189)
T ss_dssp CCCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCC-T----------------TEEECTTSCEEETT
T ss_pred CCceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccC-C----------------eEEEecCCCEEEee
Confidence 589999999999999999999999999888889999999876643211 1 11223467899999
Q ss_pred cccCCCceEEEEEEEeCCcce-eeceEEEEEecCCeeccCC---CcceecCCcEEEEeeeCcccCceEEEEeCCcccCCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRS-SSQNVHISVTGAPFVRPMG---NVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLN 156 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~~~~~~~~---~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~ 156 (258)
+ +..|+|.|+|.+.+..+.. ....+.+.+..+|.+.... ...+..|+.+.|.|.+.+.|.+.+.|++++..+...
T Consensus 64 ~-~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~ 142 (189)
T 2v5t_A 64 I-NKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN 142 (189)
T ss_dssp C-CGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCS
T ss_pred C-CHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCC
Confidence 9 9999999999999876433 3355666666665443322 345668999999999999999999999999888766
Q ss_pred cceEEec-CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 157 RRQKVFP-NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 157 ~~~~~~~-~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
....... ++.|.|.++.. +|+|.|+|.|.|..+. ....+.|.|.
T Consensus 143 ~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 187 (189)
T 2v5t_A 143 EKYILKGSNTELTVRNIIN-SDGGPYVCRATNKAGE-DEKQAFLQVF 187 (189)
T ss_dssp SSEEEETTTTEEEECSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred CcEEEecCCCEEEEcCCCh-hhCeeEEEEEEeCCCc-eeEEEEEEEE
Confidence 6555443 56799999997 9999999999999874 4455666654
No 55
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=4.8e-28 Score=194.25 Aligned_cols=214 Identities=16% Similarity=0.174 Sum_probs=155.5
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeE-----EEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHI-----SWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v-----~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+|...|.+..+.+|++++|.|.+.+ |.+.+ .|+|++..+... ...+|.|
T Consensus 1 ~i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~-------------------------~~~~l~i 54 (450)
T 1z7z_I 1 QTSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGN-------------------------NRKVYEL 54 (450)
T ss_dssp CCEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTT-------------------------TEEEEEE
T ss_pred CcccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCC-------------------------CceEEEE
Confidence 3667888999999999999999998 78888 898876533211 0126889
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeec--cCCCcceecCCcEEEEeeeCcccCc---eEEEEeCCccc
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR--PMGNVSAIAGEPLYLGCPVAGYPIE---SITWQKGVQQL 153 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~---~i~W~~~~~~~ 153 (258)
.++ +. |+| |+|.+.+..+... ..+.|.|..+|... .+....+.+|+.+.|.|.+.+.+++ .+.|++++..+
T Consensus 55 ~~v-~~-d~g-Y~C~a~~~~~~~~-~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l 130 (450)
T 1z7z_I 55 SNV-QE-DSQ-PMCYSNCPDGQST-AKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKEL 130 (450)
T ss_dssp EEE-CS-CBC-CEEEEEETTEEEE-EECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEE
T ss_pred Eec-cc-CCe-eEEEEeCCCCcce-eEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEe
Confidence 999 77 999 9999976544444 67788887766443 2444678899999999999988877 89999999876
Q ss_pred CCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCc-------cceEEEEeecCCcccc-CCCCCccCCCCeeeEE
Q psy14532 154 PLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSS-------SQNVHISVTVPPKIAP-FEFQPDLHSGDRAGVQ 225 (258)
Q Consensus 154 ~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~-------~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~ 225 (258)
..........++.|.|.++.. +|+|.|+|.+.|..+... +....|.+...|...+ ......+.+|+.+.|.
T Consensus 131 ~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~ 209 (450)
T 1z7z_I 131 KREPAVGEPAEVTTTVLVRRD-HHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVV 209 (450)
T ss_dssp EEEECCTTTEEEEEEEECCSS-CSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEE
T ss_pred ecccccccccceEEEEEeecc-ccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEE
Confidence 543221112235799988886 999999999999865321 2344455544322111 1122568899999999
Q ss_pred EEeccCCC--CceeEEEECCEeccc
Q psy14532 226 CLVTKGDP--PLTISWLKNGLPILS 248 (258)
Q Consensus 226 C~~~~~~p--~~~~~W~~~g~~l~~ 248 (258)
|.+.+..| .+.+.|+++|+.+..
T Consensus 210 C~~~g~~P~~~~~~~W~~~~~~~~~ 234 (450)
T 1z7z_I 210 CSLDGLFPVSEAQVHLALGDQRLNP 234 (450)
T ss_dssp EEEESCTTGGGCEEEEEETTEECCC
T ss_pred EEeeCCCCCCceEEEEeCCCEeCCc
Confidence 99954437 789999999998875
No 56
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.96 E-value=2.3e-27 Score=169.45 Aligned_cols=182 Identities=24% Similarity=0.388 Sum_probs=140.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+... .+..+.. .....+|.|.++
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~---~~~~~~~-------------~~~~~~L~i~~~ 70 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQS---RKYKMSS-------------DGRTHTLTVMTE 70 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCC---SSEEEEE-------------SSSEEEEEEECC
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCC---ccEEEEe-------------CCCEEEEEEecC
Confidence 688888889999999999999999998888899999998877543 1111110 001227999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc----CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP----MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~----~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+.+|+|.|+|.+.+..+... ..+.|.|...|.... .....+..|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 71 -~~~d~G~Y~C~~~n~~~~~~-~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~ 148 (197)
T 3lcy_A 71 -EQEDEGVYTCIATNEVGEVE-TSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSE 148 (197)
T ss_dssp -SGGGCEEEEEEEECSSCEEE-EEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS
T ss_pred -CccCCEEEEEEEECCCCcee-EEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCC
Confidence 99999999999998877665 667777776554432 234467789999999999999999999999998887666
Q ss_pred ceEEecC---CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 158 RQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 158 ~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
+..+... ..|.|.++...+|.|.|+|.|.|..+. .+..+.|.|.
T Consensus 149 ~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 195 (197)
T 3lcy_A 149 NITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGT-VDAILDVEIQ 195 (197)
T ss_dssp SEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCE-EEEEEEEEEE
T ss_pred ceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCc-eEEEEEEEEe
Confidence 6655444 568888887327999999999999884 4566666664
No 57
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=3.2e-28 Score=185.89 Aligned_cols=235 Identities=15% Similarity=0.176 Sum_probs=156.1
Q ss_pred eeeeecCCCceEEEEEEeec-CCCeEEEeeCCEeCcCCccccceecccceeecccccccee----eeeCCcEEEeecccC
Q psy14532 10 IQQTLQPGPPVSLKCIATGN-PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQK----VFPNGTLLIENVQKD 84 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~i~~~~~~ 84 (258)
.++.+.+|++++|.|.+.+. +.+.+.|+|++....... ..+...........+..|.. ...+++|.|.++ +.
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v-~~ 83 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTV--AVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNI-GF 83 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEE--EEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSC-CG
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceE--EEecCCCCceecCcccceEEeeccCCCceEEEEccC-CH
Confidence 35778899999999998654 445799998643221100 00000000000111111111 123568999999 99
Q ss_pred CCceEEEEEEEeCCcceeeceEEEEEecCCee---ccCCCcceecCCcEEEEeee-CcccCceEEEEeCCcccCCCcceE
Q psy14532 85 HDRGVYWCTATNKQGRSSSQNVHISVTGAPFV---RPMGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQLPLNRRQK 160 (258)
Q Consensus 85 ~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~---~~~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~~~~~~~~ 160 (258)
+|+|.|+|.+.+.........+.+.+...+.. ..+.......|+.+.|.|.+ .+.|.+.+.|++++..+.......
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~ 163 (308)
T 4fom_A 84 SDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSF 163 (308)
T ss_dssp GGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEEC
T ss_pred HHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCccccccccee
Confidence 99999999999875544446677777665532 22344455678899999986 578999999999988775432211
Q ss_pred ----EecCCeEEEEecccCCCCcEEEEEEEeCCCCC-ccceEEEEeecCCccccCCC-CCccCCCCeeeEEEEeccCCCC
Q psy14532 161 ----VFPNGTLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHISVTVPPKIAPFEF-QPDLHSGDRAGVQCLVTKGDPP 234 (258)
Q Consensus 161 ----~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~ 234 (258)
....+.|.|..+.. +|+|.|+|.|.|..+.. .+..+.|.|..+|.+...+. ...+..|+.++|.|.+ .+.|.
T Consensus 164 ~~~~~~~~s~l~i~~~~~-~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~-~g~P~ 241 (308)
T 4fom_A 164 PNETATIISQYKLFPTRF-ARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNA-DANPP 241 (308)
T ss_dssp TTSCEEEEEEEEECCCGG-GTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCE-EEESC
T ss_pred eeecccccccceEEeeee-cCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEE-ecCCC
Confidence 11123588888886 99999999999987543 34556677777777655443 3456778999999999 57777
Q ss_pred c-eeEEEECCEecccc
Q psy14532 235 L-TISWLKNGLPILSA 249 (258)
Q Consensus 235 ~-~~~W~~~g~~l~~~ 249 (258)
+ .+.|+++|..+..+
T Consensus 242 p~~v~W~k~~~~~~~~ 257 (308)
T 4fom_A 242 PFKSVWSRLDGQWPDG 257 (308)
T ss_dssp EEEEECCBSSSCCCSS
T ss_pred CcEEEEEECCeECCCc
Confidence 7 79999998887654
No 58
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.95 E-value=2.3e-28 Score=190.92 Aligned_cols=211 Identities=18% Similarity=0.193 Sum_probs=151.2
Q ss_pred eeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeee------eCCcEEEeecccC
Q psy14532 11 QQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVF------PNGTLLIENVQKD 84 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~i~~~~~~ 84 (258)
.+.+.+|++++|.|.+.+.|.+.+.|+|++..+........... ....+..|..+. .+.+|.|.++ +.
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~~L~I~~v-~~ 76 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTK-----GPSKLNDRADSRRSLWDQGNFPLIIKNL-KI 76 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEE-----CSSTTGGGEECCHHHHHTTCCCEEECSC-CG
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEec-----CCcccccceeeeeccccCCeEEEEECCC-CH
Confidence 46788999999999998888899999998753211100000000 001111222211 2567999999 99
Q ss_pred CCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecC
Q psy14532 85 HDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPN 164 (258)
Q Consensus 85 ~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~ 164 (258)
+|+|.|+|.+.+.. ..+.|.|... ...+...+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....
T Consensus 77 ~D~G~Y~C~~~n~~-----~~~~l~V~~~---~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-------~~~~ 141 (363)
T 1wio_A 77 EDSDTYICEVEDQK-----EEVQLLVFGL---TANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGG 141 (363)
T ss_dssp GGCEEEEEEETTEE-----EEEEEEEEEE---EESSCSSEESBSCEEEEEECCTTCCCCEEEECSSSCE-------EEES
T ss_pred HHCEEEEEEEEECC-----CcEEEEEEeC---CCCCceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc-------cccc
Confidence 99999999998774 2455666542 2223346789999999999988899999999987653 2356
Q ss_pred CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccC-----CCCceeEE
Q psy14532 165 GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKG-----DPPLTISW 239 (258)
Q Consensus 165 ~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~-----~p~~~~~W 239 (258)
..|.|.++.. +|+|.|+|.+.+..+ .....+.|.|...|... ....+.+|+.+.|.|.+. + .|.+.+.|
T Consensus 142 ~~L~i~~v~~-~d~G~Y~C~a~~~~~-~~~~~~~l~v~~~p~~~---~~~~~~~G~~v~l~C~~~-~~~~~~~P~p~i~W 215 (363)
T 1wio_A 142 KTLSVSQLEL-QDSGTWTCTVLQNQK-KVEFKIDIVVLAFQKAS---SIVYKKEGEQVEFSFPLA-FTVEKLTGSGELWW 215 (363)
T ss_dssp SEEEECSBCG-GGCEECEEEEEETTE-EEEECCEECEECCSCSE---EEEEEETBCCEEEECCCC-CCCCSSCEEEEEEE
T ss_pred eEEEEeeCCh-hcCCEEEEEEecCCC-eEEEEEEEEEecCCCCC---CceEEecCCEEEEEEEEe-cccccCCCceeEEE
Confidence 7899999997 999999999998744 33455566666555432 345678899999999884 5 77899999
Q ss_pred EECCEeccc
Q psy14532 240 LKNGLPILS 248 (258)
Q Consensus 240 ~~~g~~l~~ 248 (258)
+++|..+..
T Consensus 216 ~~~g~~~~~ 224 (363)
T 1wio_A 216 QAERASSSK 224 (363)
T ss_dssp EESSCCCCC
T ss_pred ecCCCCccc
Confidence 999988876
No 59
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.95 E-value=3.9e-27 Score=167.56 Aligned_cols=174 Identities=22% Similarity=0.315 Sum_probs=136.3
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecC-CCeEEEee-CCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNP-TPHISWKL-DGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
.|+++...+.+..+.+|++++|.|.+.+.+ .+.+.|++ ++..+.... .++.+. ......++|.|
T Consensus 1 rp~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~--~~~~~~------------~~~~~~~~L~i 66 (191)
T 1epf_A 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQ--QRISVV------------WNDDDSSTLTI 66 (191)
T ss_dssp --CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBS--SSEEEE------------EEETTEEEEEE
T ss_pred CceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCC--CeEEEE------------ECCCCceEEEE
Confidence 378899999999999999999999998875 78999999 777665321 111110 00112457999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC--
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL-- 155 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~-- 155 (258)
.++ +..|+|.|+|.+.+..+......+.|.|..++.+.. +....+..|+.+.|.|.+.+.|.+.+.|++++..+..
T Consensus 67 ~~~-~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~ 145 (191)
T 1epf_A 67 YNA-NIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKK 145 (191)
T ss_dssp CSC-CGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGC
T ss_pred ccC-CcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccC
Confidence 999 999999999999998855555888888887775543 4456788999999999999999999999999987753
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
..++....++.|.|.++.. +|+|.|+|.|.|..+
T Consensus 146 ~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~ 179 (191)
T 1epf_A 146 DVRFIVLSNNYLQIRGIKK-TDEGTYRCEGRILAR 179 (191)
T ss_dssp CTTEEECTTSCEEETTCCG-GGCEEEEEEEEEGGG
T ss_pred CceEEEecCCeEEECCCCh-hhCEEEEEEEEEecc
Confidence 2355556677899999997 999999999999764
No 60
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.95 E-value=7e-27 Score=169.56 Aligned_cols=184 Identities=28% Similarity=0.543 Sum_probs=139.4
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCc----E
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGT----L 76 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l 76 (258)
.||.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+......... ....++. |
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~----------------~~~~~~~~~~~l 71 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHR----------------VQFKDGALFFYR 71 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSE----------------EECTTSCEEESS
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCcccee----------------EEecCCceEEEE
Confidence 3789999999999999999999999998888999999999887654111100 0111223 3
Q ss_pred EEeecccCCCceEEEEEEEeCCcceeeceEEEEEec--CCeeccCCCcceecCCcEEEEeee-CcccCceEEEEeCCccc
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG--APFVRPMGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQL 153 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~--~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~ 153 (258)
.|.++ +..|+|.|+|.+.+..+...+..+.|.|.. +.....+....+..|+.+.|.|.+ .+.|.+.+.|++++..+
T Consensus 72 ~i~~v-~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~ 150 (217)
T 2vr9_A 72 TMQGK-KEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPL 150 (217)
T ss_dssp CCBSS-SCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEE
T ss_pred EeccC-CcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCC
Confidence 57888 899999999999998876644555666653 333334556678899999999999 88999999999998877
Q ss_pred C--------CCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 154 P--------LNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 154 ~--------~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
. ...+.....++.|.|.++.. +|.|.|+|.|.|..|...+....|.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 151 DDLKAMSFGASSRVRIVDGGNLLISNVEP-IDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp CCCCCC---CCCSEEEETTTEEEESSCCS-TTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CcccccccccCCcEEecCCCcEEEeeCCH-HHCeEEEEEEEcccceeccccEEEEEE
Confidence 6 33445555677899999997 999999999999988655554544443
No 61
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.95 E-value=8.4e-27 Score=165.56 Aligned_cols=179 Identities=22% Similarity=0.389 Sum_probs=136.6
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeEEEee-CCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecc
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKL-DGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQ 82 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 82 (258)
+|...+.+..+.+|++++|.|.+.+.|. .+.|++ ++..+... .+..+.. .....+|.|.++
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~---~~~~~~~-------------~~~~~~L~i~~~- 65 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIST---QRVVVQK-------------EGVRSRLTIYNA- 65 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCC---SSEEEEE-------------ETTEEEEEECSC-
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCC---ceEEEEC-------------CCCeEEEEEccC-
Confidence 4677888899999999999999998876 999999 66655433 1111110 001237999999
Q ss_pred cCCCceEEEEEEEeCCcceeeceEEEEEecCCeec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC--CCcce
Q psy14532 83 KDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP--LNRRQ 159 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~--~~~~~ 159 (258)
+.+|+|.|+|.+.+..+...+..+.|.|..+|.+. ......+..|+.+.|.|.+.+.|.+.+.|++++..+. ...++
T Consensus 66 ~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~ 145 (189)
T 2v44_A 66 NIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRF 145 (189)
T ss_dssp CGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTE
T ss_pred CcccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCE
Confidence 99999999999999887765578888998777554 3455678899999999999999999999999988765 34556
Q ss_pred EEecCCeEEEEecccCCCCcEEEEEEEeCCCCC-ccceEEEEe
Q psy14532 160 KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHISV 201 (258)
Q Consensus 160 ~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v 201 (258)
....++.|.|.++.. +|+|.|+|.|.|..+.. ....+.|.|
T Consensus 146 ~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~~~~~~~~v~V 187 (189)
T 2v44_A 146 AMLANNNLQILNINK-SDEGIYRCEGRVEARGEIDFRDIIVIV 187 (189)
T ss_dssp EECTTSCEEETTCCG-GGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred EEecCCcEEEEEcCc-ccCeEEEEEEEccccCceeeeeEEEEE
Confidence 666778999999997 99999999999987532 234444444
No 62
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.95 E-value=5.9e-27 Score=170.10 Aligned_cols=172 Identities=23% Similarity=0.380 Sum_probs=139.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
.++|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+... ..++|.|.++
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-------------------------~~~~L~i~~v 72 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-------------------------NTSELIFNAV 72 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC-------------------------CSSEEEETTC
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-------------------------CCCEEEEccC
Confidence 467888999999999999999999998888899999998876543 2457999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCC---------------eec-cCCCcceecCCcEEEEeeeCcccCceEE
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP---------------FVR-PMGNVSAIAGEPLYLGCPVAGYPIESIT 145 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~---------------~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~ 145 (258)
+..|+|.|+|.+.+..+...+..+.|.|...+ .+. .+....+..|+.+.|.|.+.+.|.+.+.
T Consensus 73 -~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~ 151 (218)
T 3k0w_A 73 -HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQ 151 (218)
T ss_dssp -CGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEE
T ss_pred -ChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEE
Confidence 99999999999999877665577888887552 221 2344678889999999999999999999
Q ss_pred EEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 146 WQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 146 W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
|++++..+... ....|.|.++.. +|.|.|+|.+.|..+...+..+.|.|...+.
T Consensus 152 W~~~~~~~~~~------~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~ 205 (218)
T 3k0w_A 152 WFKNELPLTHE------TKKLYMVPYVDL-EHQGTYWCHVYNDRDSQDSKKVEIIIDELNN 205 (218)
T ss_dssp EEETTEECTTC------CSSEEEESSCCG-GGCEEEEEEEECSSCEEECCCEEEEECC---
T ss_pred EEECCEECCCC------CCCEEEEeecCh-hcCEEEEEEEEcCCCCceeeeEEEEEeCCcc
Confidence 99999877644 235799999997 9999999999998886677888888876443
No 63
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.95 E-value=4.9e-27 Score=164.74 Aligned_cols=166 Identities=17% Similarity=0.268 Sum_probs=132.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCe-EEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPH-ISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.+...+....+.+|++++|.|.+.+.+.+. +.|+|++..+... +++|.|.+
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~--------------------------~~~L~i~~ 60 (175)
T 1fnl_A 7 KAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ--------------------------ASSYFIDA 60 (175)
T ss_dssp CCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS--------------------------CSEEEESS
T ss_pred CCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC--------------------------ceEEEEeC
Confidence 57788888888899999999999998877665 8899998766432 56899999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccC-ceEEEEeCCcccCCCcce
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPI-ESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~i~W~~~~~~~~~~~~~ 159 (258)
+ +.+|+|.|+|.+.+..+ +..+.|.|..++.........+.+|+.+.|.|.+.+.++ +.+.|++++..+..
T Consensus 61 ~-~~~d~G~Y~C~~~n~~~---s~~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~---- 132 (175)
T 1fnl_A 61 A-TVNDSGEYRCQTNLSTL---SDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY---- 132 (175)
T ss_dssp C-CGGGCEEEEEECSSSCC---CCCEEEEEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE----
T ss_pred C-CcccCEEEEEEeeCCcc---cccEEEEEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC----
Confidence 9 99999999999987543 256777887665544445567889999999999987654 59999999887632
Q ss_pred EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 160 KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 160 ~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
......|.|.++.. +|+|.|+|.|.|..+...+..+.|.|..
T Consensus 133 -~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 133 -FHHNSDFHIPKATL-KDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp -EEECCCEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred -CCCCCEEEEcccCh-hhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 23467899999997 9999999999997665566777777764
No 64
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.95 E-value=1.7e-26 Score=164.15 Aligned_cols=174 Identities=25% Similarity=0.365 Sum_probs=133.2
Q ss_pred CCcceeeceeeeecC-CCceEEEEEEeecCC--CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQQTLQP-GPPVSLKCIATGNPT--PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~-g~~v~l~C~~~~~~~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
||.|...+ ...+.+ |++++|.|.+.+.+. +.+.|+|++..+...... ..+++|.|
T Consensus 3 ~P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~---------------------~~~~~L~i 60 (190)
T 2wv3_A 3 EPRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKN---------------------ASNMEYRI 60 (190)
T ss_dssp CCEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBC---------------------CSEEEEEE
T ss_pred CCcccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceE---------------------eccEEEEE
Confidence 67887644 455556 999999999998876 789999999877644110 12468999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCceEEEEe--CCcccC-
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIESITWQK--GVQQLP- 154 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~--~~~~~~- 154 (258)
.++ +.+|+|.|+|.+.+. +... ..+.|.|..+|.+.. .....+..|+.+.|.|.+.+.|.+.+.|++ ++..+.
T Consensus 61 ~~~-~~~d~G~Y~C~~~n~-~~~~-~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~ 137 (190)
T 2wv3_A 61 NKP-RAEDSGEYHCVYHFV-SAPK-ANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEI 137 (190)
T ss_dssp SSC-CGGGCEEEEEEEEET-TEEE-EEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEEC
T ss_pred ecC-CcccCEEEEEEEEeC-Cccc-ccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeee
Confidence 999 999999999999998 5554 788899988876553 445678899999999999999999999999 555443
Q ss_pred --CCcceEEecC---CeEEEEecc-cCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 155 --LNRRQKVFPN---GTLLIENVQ-KDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 155 --~~~~~~~~~~---~~l~i~~~~-~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
...++.+..+ +.|.|.++. . +|.|.|+|.|.|..+. ....+.|.|.
T Consensus 138 ~~~~~~~~~~~~~~~~~L~i~~~~~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 189 (190)
T 2wv3_A 138 SNSSGRFFIINKENYTELNIVNLQIT-EDPGEYECNATNSIGS-ASVSTVLRVR 189 (190)
T ss_dssp CCTTSCEEEEECSSEEEEEECSCCTT-TSCEEEEEEEECSSCE-EEEEEEEEEE
T ss_pred ecCCCeEEEecCCCeeEEEEEecccc-CCCEEEEEEEEecCCc-ceeEEEEEEE
Confidence 2334444333 269999998 6 9999999999999874 4455566554
No 65
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=1.9e-26 Score=181.57 Aligned_cols=224 Identities=25% Similarity=0.373 Sum_probs=160.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCcc--ccceecccceeeccccccceeeeeCCcEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRH--ENKNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
+|.|.. +.+..+.+|++++|.|.+.+.|.+.+.|+|+ +..+..... ..++.+. ....+++|.
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~-------------~~~~~~~L~ 66 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVK-------------GQHGSSSLH 66 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEE-------------ECSSEEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEe-------------ccCCcceEE
Confidence 577776 6677888999999999999999999999998 777654211 0111111 001246899
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCc-ceecCCcEEEEeeeCcccCceEEEEeCCcccCCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNV-SAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLN 156 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~-~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~ 156 (258)
|.++ +.+|+|.|+|.+.|..|... ..+.|.|..+|.+...... .+..|+.+.|.|.+.+.|.+.+.|++++..+...
T Consensus 67 i~~v-~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~ 144 (389)
T 2jll_A 67 IKDV-KLSDSGRYDCEAASRIGGHQ-KSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAK 144 (389)
T ss_dssp EESC-CGGGCEEEEEEEECSSCEEE-EEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCT
T ss_pred Eccc-ChhhCEEEEEEEEeCCCCcc-eEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcc
Confidence 9999 99999999999999988775 8889999877766554333 5788999999999999999999999999887654
Q ss_pred c--ceEEec---CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEec--
Q psy14532 157 R--RQKVFP---NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVT-- 229 (258)
Q Consensus 157 ~--~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~-- 229 (258)
. +..+.. ...|.|.++.. +|.|.|+|.|.|..|. ....+.+.+...|..+... ......+..+.|.|...
T Consensus 145 ~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~G~-~~~~~~l~v~~~P~~P~~~-~~~~~~~~~~~l~w~~p~~ 221 (389)
T 2jll_A 145 NTTNLKTYSTGRKMILEIAPTSD-NDFGRYNCTATNHIGT-RFQEYILALADVPSSPYGV-KIIELSQTTAKVSFNKPDS 221 (389)
T ss_dssp TCTTEEEEECSSCEEEEECCCST-TSSEEEEEEEEETTEE-EEEEEEEEECCCCCCCEEE-EEEEECSSCEEEEEECCSC
T ss_pred cCceEEEeccCCEEEEEECCCCh-hhCEEEEEEEEcCCCc-EEEEEEEEecCCCCCCcce-EEeeccCCEEEEEEeCCCC
Confidence 3 333332 34699999997 9999999999999874 4455666665555432111 11223467889999852
Q ss_pred -cCCCCc--eeEEEECCE
Q psy14532 230 -KGDPPL--TISWLKNGL 244 (258)
Q Consensus 230 -~~~p~~--~~~W~~~g~ 244 (258)
.+.|.. .+.|.+++.
T Consensus 222 ~~g~pi~~y~v~~~~~~~ 239 (389)
T 2jll_A 222 HGGVPIHHYQVDVKEVAS 239 (389)
T ss_dssp CTTSCEEEEEEEEEETTC
T ss_pred CCCcceEEEEEEEEECCC
Confidence 222332 567887664
No 66
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.95 E-value=2.9e-27 Score=189.07 Aligned_cols=234 Identities=18% Similarity=0.302 Sum_probs=152.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEee-cCCC-eEEEeeCCEeCcCCc-cccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATG-NPTP-HISWKLDGYPLAGDR-HENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~-~~~~-~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+|.+...+....+.+|+.+.|.|.+.+ .|.+ .+.|+|+|..+.... ....... .........+.|.|
T Consensus 116 ~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~L~i 185 (438)
T 1qgc_4 116 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQD----------SKDSTYSMSSTLTL 185 (438)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCC----------TTTCCEEEEEEEEE
T ss_pred CCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceecccccc----------CCCCcEEEEEEEEE
Confidence 455554333334456889999999987 5666 899999998775431 0000000 00011112357999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEec-CCeeccCCCcceecCCcEEEEeeeCccc--CceEEEEeC--Cccc
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG-APFVRPMGNVSAIAGEPLYLGCPVAGYP--IESITWQKG--VQQL 153 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~--~~~~ 153 (258)
.++ ..+|+|.|+|.+.+..+... ....+.+.. ...+..+....+.+|+.+.|.|.+.+.| .+.+.|+++ +..+
T Consensus 186 ~~~-~~~d~G~Y~C~a~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~ 263 (438)
T 1qgc_4 186 TKD-EYERHNSYTCEATHKTSTSP-IVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRL 263 (438)
T ss_dssp EHH-HHHTCCEEEEEEEETTCSSC-EEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEE
T ss_pred eCc-ccCCCCeEEEEEEecccCCc-eecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCc
Confidence 999 99999999999999876542 222222211 1223334556788999999999998877 679999996 4322
Q ss_pred C-----------------CCcceEEec-----CCeEEEEecccCCCCcEEEEEEEeCCCC----CccceEEEEeec----
Q psy14532 154 P-----------------LNRRQKVFP-----NGTLLIENVQKDHDRGVYWCTATNKQGR----SSSQNVHISVTV---- 203 (258)
Q Consensus 154 ~-----------------~~~~~~~~~-----~~~l~i~~~~~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~~---- 203 (258)
. ...++.+.. ...|.|.++.. +|+|.|+|.|.|..+. .......|.|..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~ 342 (438)
T 1qgc_4 264 EWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRS-ADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTT 342 (438)
T ss_dssp EEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCG-GGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCB
T ss_pred EEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCCh-hhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCC
Confidence 1 122333322 23799999997 9999999999984321 122345666653
Q ss_pred CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEeccc
Q psy14532 204 PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILS 248 (258)
Q Consensus 204 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~ 248 (258)
+|.+...+....+..|+.++|.|.+.+.+|.+ .|.|+++|..+..
T Consensus 343 ~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~ 388 (438)
T 1qgc_4 343 PPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGV 388 (438)
T ss_dssp CCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSE
T ss_pred CCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCce
Confidence 33333333344577899999999995334877 9999999988753
No 67
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=5.8e-27 Score=191.35 Aligned_cols=230 Identities=16% Similarity=0.233 Sum_probs=149.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeec-CCC-eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGN-PTP-HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.+........+.+|+.+.|.|.+.+. |.+ .|.|++++..+..... ...... ........+|.|.
T Consensus 219 ~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~-~~~~~~-----------~g~~~~~s~L~i~ 286 (523)
T 2rcj_C 219 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTF-PAVLQS-----------SGLYSLSSVVTVP 286 (523)
T ss_pred CCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeC-CcEecC-----------CCcEEEEEEEEec
Confidence 3444433334456899999999999886 767 8999999876432100 000000 0001123479999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeec--cCCCcc-eecCCcEEEEeeeCcccC----ceEEEEeCCcc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR--PMGNVS-AIAGEPLYLGCPVAGYPI----ESITWQKGVQQ 152 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~-~~~g~~~~l~C~~~~~~~----~~i~W~~~~~~ 152 (258)
++ ...| |.|+|.+.|..+... ....|.+...|.+. .+.... +.+|+.+.|.|.+.|.++ +.|.|++++..
T Consensus 287 ~~-~~~d-G~Y~C~a~n~~g~~~-~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~ 363 (523)
T 2rcj_C 287 SS-SLGT-QTYICNVNHKPSNTK-VDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQ 363 (523)
T ss_pred hh-hcCC-ceEEEEEEeCCCCcc-eEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeE
Confidence 99 8899 999999999988755 55555554444322 222233 678999999999988643 59999999987
Q ss_pred cCCCcceE--EecC------CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEE----eecCCccccCCCCCccCCCC
Q psy14532 153 LPLNRRQK--VFPN------GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHIS----VTVPPKIAPFEFQPDLHSGD 220 (258)
Q Consensus 153 ~~~~~~~~--~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~----v~~~p~~~~~~~~~~~~~g~ 220 (258)
+....... ...+ +.|.|.++.. +|+|.|+|.|.|..+.. .....+. +..+|.+...+.......|+
T Consensus 364 l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~~~-~~~~~~~~~~~~~~~P~v~~~~~~~~~~~~~ 441 (523)
T 2rcj_C 364 VHNAKTKPREQQYNSTYRVVSVLTVLHQNW-LDGKEYKCKVSNKALPA-PIEKTISKAKGQPREPQVYTLPPSREEMTKN 441 (523)
T ss_pred ccCCccCCceecCCCcEEEEEEEEECHHHh-cCCCeEEEEEeCCCCCC-ceeEEEEcccCCCCCCEEEEeCCChHHccCC
Confidence 75443211 1122 2477777776 89999999999876532 2223333 34556555443332223344
Q ss_pred eeeEEEEeccCCCC--ceeEEEECCEecccc
Q psy14532 221 RAGVQCLVTKGDPP--LTISWLKNGLPILSA 249 (258)
Q Consensus 221 ~~~l~C~~~~~~p~--~~~~W~~~g~~l~~~ 249 (258)
.+.|.|.+. +.|+ ..|.|++||+.+...
T Consensus 442 ~~~l~C~~~-g~~p~~~~v~W~k~g~~~~~~ 471 (523)
T 2rcj_C 442 QVSLTCLVK-GFYPSDIAVEWESNGQPENNY 471 (523)
T ss_pred ceEEEEEEE-eeECCCCEEEEEECCEECCCe
Confidence 599999995 5433 499999999999743
No 68
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=5.5e-27 Score=175.28 Aligned_cols=198 Identities=17% Similarity=0.255 Sum_probs=146.1
Q ss_pred eeeecCCCceEEEEEEee-cCCC--eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe---ecccC
Q psy14532 11 QQTLQPGPPVSLKCIATG-NPTP--HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE---NVQKD 84 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~~~~-~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~ 84 (258)
+..+.+|++++|.|.+.+ .|.+ .+.|+|++..+... . ......+.+. ++ +.
T Consensus 12 ~~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~-----~-----------------~~~~~~~~~~~~~~~-~~ 68 (265)
T 2oz4_A 12 PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT-----V-----------------TYGNDSFSAKASVSV-TA 68 (265)
T ss_dssp CSEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCE-----E-----------------EECSSEEEEEEEEEE-CG
T ss_pred CceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCce-----E-----------------eeCCCeEEEEeeccc-cc
Confidence 347889999999999998 6766 99999999877542 0 0112233332 34 55
Q ss_pred CCce--EEEEEEEeCCcceeeceEEEEEecC--CeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceE
Q psy14532 85 HDRG--VYWCTATNKQGRSSSQNVHISVTGA--PFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQK 160 (258)
Q Consensus 85 ~d~G--~Y~C~~~~~~~~~~~~~~~l~v~~~--~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~ 160 (258)
.|+| .|+|.+.+..+... ..+.|.|... +.+. .....+.+|+.+.|.|.+. |.+.+.| ++..+....
T Consensus 69 ~d~g~g~Y~C~a~n~~~~~~-~~~~l~V~~~p~p~~~-~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~--- 139 (265)
T 2oz4_A 69 EDEGTQRLTCAVILGNQSQE-TLQTVTIYSFPAPNVI-LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG--- 139 (265)
T ss_dssp GGCEEEEEEEEEEETTEEEE-EEEEEEEECCCCCEEE-ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS---
T ss_pred ccCCcceEEEEEecCCCCcE-EEEEEEEeCCCCceee-cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC---
Confidence 6777 59999999887765 7788888653 3333 3455678899999999998 8889999 777663221
Q ss_pred EecCCeEEEEecccCCCCcEEEEEEEeCC-CCCc--cceEEEEeecCCccccC--CCCCccCCCCeeeEEEEeccCCCCc
Q psy14532 161 VFPNGTLLIENVQKDHDRGVYWCTATNKQ-GRSS--SQNVHISVTVPPKIAPF--EFQPDLHSGDRAGVQCLVTKGDPPL 235 (258)
Q Consensus 161 ~~~~~~l~i~~~~~~~~~g~y~C~~~~~~-~~~~--~~~~~l~v~~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~ 235 (258)
..+.|.|..+.. +|+|.|+|.+.|.. +... +..+.|.|..+|.+... +....+.+|+.+.|.|.+ .+.|.+
T Consensus 140 --~~~~l~i~~~~~-~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~-~g~P~p 215 (265)
T 2oz4_A 140 --PRAQLLLKATPE-DNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQA-WGNPLP 215 (265)
T ss_dssp --SEECCEEECCGG-GTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCC-EEESCC
T ss_pred --CcEEEEEccccc-cCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeEC-ccCCCC
Confidence 224577777776 89999999998654 4322 26677888888876544 334568889999999999 699999
Q ss_pred eeEEEECCE
Q psy14532 236 TISWLKNGL 244 (258)
Q Consensus 236 ~~~W~~~g~ 244 (258)
.+.|+++|.
T Consensus 216 ~i~W~~~~~ 224 (265)
T 2oz4_A 216 ELKCLKDGT 224 (265)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCc
Confidence 999999987
No 69
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=3.8e-27 Score=178.30 Aligned_cols=213 Identities=14% Similarity=0.199 Sum_probs=142.6
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecc
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQ 82 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 82 (258)
|.|.....++.+.+|++++|.|.+.+. +.|++++..+... ...... ....++|.|.++
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~-----~~~~~~------------~~~~~~L~i~~~- 58 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQE-----MAKAQD------------GTFSSVLTLTNL- 58 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSEE-----EEECTT------------SCEEEEEEECSC-
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcccc-----eeccCC------------CceeEEEEEccC-
Confidence 566666777889999999999998864 9999998766311 110000 001357999999
Q ss_pred cCCCceEEEEEEEeCCcceee--ceEEEEEecCC--eeccCCC---cceecCCcEEEEeeeCcccCceEEEEeCCcccCC
Q psy14532 83 KDHDRGVYWCTATNKQGRSSS--QNVHISVTGAP--FVRPMGN---VSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL 155 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~--~~~~l~v~~~~--~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~ 155 (258)
+.+|+|.|+|.+.+..+.... ..+.|.|..+. ++..... ..+.+|+.+.|.|.+. .|.+.++|++++.....
T Consensus 59 ~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~ 137 (289)
T 3mjg_X 59 TGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVAL 137 (289)
T ss_dssp CGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCC
T ss_pred ChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCcc
Confidence 999999999999988765322 44445544332 2222112 4578899999999998 57788999886532222
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec--CCccccCCCCCccCCCCeeeEEEEeccCCC
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV--PPKIAPFEFQPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~--~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p 233 (258)
... ......+. .. .|+|.|+|.+.+..+...+..+.|.+.. +|.+...+....+.+|+.+.|.|.+ .+.|
T Consensus 138 ~~~--~~~~~~~~----~~-~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~-~g~p 209 (289)
T 3mjg_X 138 PVP--YDHQRGFS----GI-FEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIV-IGNE 209 (289)
T ss_dssp CCC--EETTTEEE----EC-CCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEE-ESCS
T ss_pred cee--ecCCcCee----ee-ccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEE-CCCC
Confidence 111 11111111 24 7999999999987665555666677765 5555555556678899999999999 5799
Q ss_pred CceeEEEECCEec
Q psy14532 234 PLTISWLKNGLPI 246 (258)
Q Consensus 234 ~~~~~W~~~g~~l 246 (258)
.+.+.|+++++..
T Consensus 210 ~p~v~W~~~~~~~ 222 (289)
T 3mjg_X 210 VVNFEWTYPRKES 222 (289)
T ss_dssp SBEEEEECTTSSS
T ss_pred CcceEEEcCCccC
Confidence 9999999877654
No 70
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.95 E-value=6.5e-27 Score=166.45 Aligned_cols=179 Identities=27% Similarity=0.490 Sum_probs=136.6
Q ss_pred CCCcceee--ceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 1 SHPQLIYK--FIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 1 ~~p~~~~~--~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+||.|... +.++.+.+|++++|.|.+.+.|.+.+.|++++..+... .++.+ ...+.+|.|
T Consensus 1 spP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~---~~~~~---------------~~~~~~L~i 62 (192)
T 2va4_A 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN---EKYIL---------------KGSNTELTV 62 (192)
T ss_dssp CCCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCS---SSEEE---------------ETTTTEEEE
T ss_pred CCCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCC---ccEEE---------------eCCeeEEEE
Confidence 58888654 34678999999999999998888899999999887654 11111 112457999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccCC-
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLPL- 155 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~~- 155 (258)
.++ +..|+|.|+|.+.+..+... ..+.|.|..+|.+.......+..|+.+.|.|.+.+.|.+.+.|++++ ..+..
T Consensus 63 ~~~-~~~d~G~Y~C~~~~~~~~~~-~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~ 140 (192)
T 2va4_A 63 RNI-INSDGGPYVCRATNKAGEDE-KQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEG 140 (192)
T ss_dssp CSC-CGGGCEEEEEEEEETTEEEE-EEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTT
T ss_pred ecC-ChhcCcEEEEEEEccccccc-eEEEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeecc
Confidence 999 99999999999999887666 77788887777665555566778999999999999999999999983 33322
Q ss_pred ----CcceEEe---cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 156 ----NRRQKVF---PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 156 ----~~~~~~~---~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
..+.... ....|.|.++.. +|.|.|+|.|.|..+. .+..+.|.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V 191 (192)
T 2va4_A 141 DKSLDGRIEVKGQHGSSSLHIKDVKL-SDSGRYDCEAASRIGG-HQKSMYLDI 191 (192)
T ss_dssp CBCTTSCEEEEEETTEEEEEEESCCG-GGCEEEEEEEECSSCE-EEEEEEEEE
T ss_pred ccccCCcEEEeeccCceEEEEecCCc-ccCEEEEEEEEecCCc-eEEEEEEEe
Confidence 1222221 125799999997 9999999999999884 455666655
No 71
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.95 E-value=3e-27 Score=169.66 Aligned_cols=170 Identities=17% Similarity=0.266 Sum_probs=134.1
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCe-EEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPH-ISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.|...+.+..+.+|++++|.|.+.+.+.+. +.|+|++..+... .++|.|.+
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~--------------------------~~~L~i~~ 60 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ--------------------------ASSYFIDA 60 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC--------------------------SSEEEESS
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC--------------------------ccEEEEec
Confidence 46777888878899999999999999877664 9999998876543 25899999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcc-cCceEEEEeCCcccCCCcce
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGY-PIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~i~W~~~~~~~~~~~~~ 159 (258)
+ +.+|+|.|+|.+.+.. . +..+.|.|...+.+.......+.+|+.+.|.|.+.+. |.+.+.|++++..+..
T Consensus 61 v-~~~D~G~Y~C~a~n~~--~-s~~~~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~---- 132 (204)
T 3sgj_C 61 A-TVDDSGEYRCQTQLST--L-SDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY---- 132 (204)
T ss_dssp C-CGGGCEEEEEEETTSB--C-CCCEEEEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE----
T ss_pred c-cccCCEEEEEEeCCCc--c-cccEEEEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec----
Confidence 9 9999999999998742 2 3567888887776555555778899999999999665 5689999999987532
Q ss_pred EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcc
Q psy14532 160 KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKI 207 (258)
Q Consensus 160 ~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 207 (258)
....+.|.|.++.. +|+|.|+|.+.|..+...+..+.|.|..+|..
T Consensus 133 -~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~ 178 (204)
T 3sgj_C 133 -FHHNSDFYIPKATL-KDSGSYFCRGLVGSKNVSSETVQITITQGLAV 178 (204)
T ss_dssp -EEECCCEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred -ccCCceEEECcCCc-ccCEEEEEEEEeCCCceecCcEEEEEeCcCCC
Confidence 22467899999998 99999999999965545677888888876543
No 72
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.95 E-value=1.2e-26 Score=163.71 Aligned_cols=178 Identities=25% Similarity=0.459 Sum_probs=135.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|+|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+... ....+.. . .....++|.|.++
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~---~~~~~~~--------~---~~~~~~~L~i~~~ 67 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL---DQLYIPV--------S---EQHWIGFLSLKSV 67 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSS---EEEEEEE--------E---TTEEEEEEEESSC
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCC---CceEEEe--------c---CCCceEEEEEeec
Confidence 678888999999999999999999998888899999999887654 1111110 0 0011357999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCc-eEEEEeCCcccCCCcce
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIE-SITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~-~i~W~~~~~~~~~~~~~ 159 (258)
+..|+|.|+|.+.+..+...+..+.|.|..+|.+.. +....+..|+.+.|.|.+.+.|.+ .+.|++++..+.....
T Consensus 68 -~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~- 145 (182)
T 1rhf_A 68 -ERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP- 145 (182)
T ss_dssp -CGGGCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-
T ss_pred -CcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-
Confidence 999999999999998766555788899988775543 455678899999999999999988 9999999987754322
Q ss_pred EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 160 KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 160 ~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
....|.|.++ +|+|.|+|.|.|..|...+..+.|.|
T Consensus 146 ---~~~~L~i~~~---~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 146 ---SPSVLNVTGV---TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ---SSEEEEECCC---SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ---CceEEEEecc---ccCeEEEEEEECCCCCcccceEEEEe
Confidence 5567888776 57899999999998865556676665
No 73
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.95 E-value=3.1e-27 Score=165.90 Aligned_cols=169 Identities=22% Similarity=0.340 Sum_probs=134.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCC-eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTP-HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.|...+....+.+|++++|.|.+.+.+.+ .+.|++++..+... +++|.|.+
T Consensus 4 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~--------------------------~~~L~i~~ 57 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET--------------------------NSSLNIVN 57 (176)
T ss_dssp CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC--------------------------SSEEEECS
T ss_pred CCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC--------------------------ceEEEEec
Confidence 6888888888899999999999999887664 69999998876532 56899999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeC-cccCceEEEEeCCcccCCCcce
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVA-GYPIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~i~W~~~~~~~~~~~~~ 159 (258)
+ +.+|+|.|+|.+.+..+. ..+.|.|..++.........+.+|+.+.|.|.+. +.|.+.+.|++++..+...
T Consensus 58 v-~~~d~G~Y~C~~~~~~~s---~~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~--- 130 (176)
T 1f2q_A 58 A-KFEDSGEYKCQHQQVNES---EPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW--- 130 (176)
T ss_dssp C-CGGGCEEEEEECTTSSCC---CCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC---
T ss_pred c-ceecCEEEEEEcCCcccc---ccEEEEEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee---
Confidence 9 999999999999875432 5567777755554444556788999999999995 5667799999999877432
Q ss_pred EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 160 KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 160 ~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
..++.|.|.++.. +|+|.|+|.+.|..+...+..+.|.|..+|.
T Consensus 131 --~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 131 --YENHNISITNATV-EDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp --CCSSEEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred --cCCCeEEECCCCc-ccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 2356899999997 9999999999997654567778899988775
No 74
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.95 E-value=1.1e-25 Score=186.26 Aligned_cols=228 Identities=18% Similarity=0.228 Sum_probs=160.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeec-CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC------
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGN-PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG------ 74 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 74 (258)
+|.+...+.+..+.+|++++|.|.+.+. +.+.+.|+|++....... ..........+..+..+..++
T Consensus 112 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~------~~~~~~~~~~~~~r~~~~~~~~~~~~~ 185 (585)
T 2ocw_A 112 GPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLV------IDSSGYVNPNYTGRIRLDIQGTGQLLF 185 (585)
T ss_pred CccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEE------ecCCcccCccccCcEEEEeccCCCcEE
Confidence 5777777888899999999999999864 456899999865321100 000000011112222222222
Q ss_pred cEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCccc-C-ceEEEE-eCCc
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYP-I-ESITWQ-KGVQ 151 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~-~~i~W~-~~~~ 151 (258)
+|.|.++ +.+|+|.|+|.+.+..+... ..+.|.|..++ +....+.+|+.+.|.|.+.+.+ . +.+.|+ +++.
T Consensus 186 ~L~I~~v-~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~----p~~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~ 259 (585)
T 2ocw_A 186 SVVINQL-RLSDAGQYLCQAGDDSNSNK-KNADLQVLKPE----PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGE 259 (585)
T ss_pred EEEEccC-ChhHCeEEEEEeccCCcccc-ceEEEEEccCC----CceeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCC
Confidence 6999999 99999999999998887765 77888887543 2334577899999999974322 2 688896 7763
Q ss_pred ccC------------CCcceEEec---CC--eEEEEecccCCCCcEEEEEEEeCCCCCc----cceEEEEeecCCccccC
Q psy14532 152 QLP------------LNRRQKVFP---NG--TLLIENVQKDHDRGVYWCTATNKQGRSS----SQNVHISVTVPPKIAPF 210 (258)
Q Consensus 152 ~~~------------~~~~~~~~~---~~--~l~i~~~~~~~~~g~y~C~~~~~~~~~~----~~~~~l~v~~~p~~~~~ 210 (258)
... ...+..+.. ++ .|.|.++.. +|+|.|+|.|.|. +... ...+.|.|..+|.+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~-~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~~ 337 (585)
T 2ocw_A 260 NCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRK-EDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPRS 337 (585)
T ss_pred CcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCCh-hhCEEEEEEEEcC-CCccccCceeeEEEEEecccccccC
Confidence 211 122333321 34 699999997 9999999999995 3222 26778889888888777
Q ss_pred CCCCccCCCCeeeEEEEeccCCCCcee----EEEE--CCE
Q psy14532 211 EFQPDLHSGDRAGVQCLVTKGDPPLTI----SWLK--NGL 244 (258)
Q Consensus 211 ~~~~~~~~g~~~~l~C~~~~~~p~~~~----~W~~--~g~ 244 (258)
+....+.+|+.+.|.|.+ .+.|.+.+ .|++ +|.
T Consensus 338 ~~~~~~~~G~~v~l~C~~-~~~p~p~i~~w~~W~~~~~g~ 376 (585)
T 2ocw_A 338 PTVVKGVAGSSVAVLCPY-NRKESKSIKYWCLWEGAQNGR 376 (585)
T ss_pred CcceEEEeCCcEEEEEec-CCCCCccEEEEEEEEccCCCC
Confidence 777788899999999999 68888766 7999 887
No 75
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.95 E-value=2.9e-26 Score=183.29 Aligned_cols=230 Identities=16% Similarity=0.202 Sum_probs=150.2
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCC----CeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCC
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPT----PHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNG 74 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~----~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 74 (258)
.|...|.++.+.+|++++|.|.+.+.+. +.+.|+|++ ..+........ .....+..+.... ...
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~-------~~~~~~~~r~~~~~~~~~~ 75 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRAS-------NLESGIPDRFSGSGSRTDF 75 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSS-------CBCSSCCTTEEEEEETTEE
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECc-------ccCCCccCcEEEEccCCcE
Confidence 4566788899999999999999987765 489999963 22110000000 0000111121111 134
Q ss_pred cEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCc-ccCc-eEEEEe
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAG-YPIE-SITWQK 148 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~~ 148 (258)
+|.|.++ +.+|+|.|+|.+.+..+........|.|.. +|.+.. ........|+.+.|.|.+.+ .|.+ .+.|++
T Consensus 76 ~L~I~~v-~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 154 (438)
T 1qgc_4 76 TLTIDPV-EADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 154 (438)
T ss_dssp EEEESSC-CGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE
T ss_pred EEEeCCC-cCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEE
Confidence 7999999 999999999999998764433556677753 333332 23333446889999999987 6666 899999
Q ss_pred CCcccCCCcce--E--------EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecC--CccccCCCCCcc
Q psy14532 149 GVQQLPLNRRQ--K--------VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVP--PKIAPFEFQPDL 216 (258)
Q Consensus 149 ~~~~~~~~~~~--~--------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~--p~~~~~~~~~~~ 216 (258)
++..+...... . ....+.|.|.++.. +|+|.|+|.|.|..+.. .+.+.+... +.....+....+
T Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~---~~~~~~~~~~~~~~~~~~~~~~v 230 (438)
T 1qgc_4 155 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEY-ERHNSYTCEATHKTSTS---PIVKSFNRNECEVMLVESGGGLV 230 (438)
T ss_dssp TTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHH-HTCCEEEEEEEETTCSS---CEEEEEETTC-CCEEEEECCEEE
T ss_pred CCEEcCCCceeccccccCCCCcEEEEEEEEEeCccc-CCCCeEEEEEEecccCC---ceecccccccceeEEecCCceEE
Confidence 99876544111 0 11123689999987 99999999999987642 333444321 111112345568
Q ss_pred CCCCeeeEEEEeccCCC--CceeEEEEC--CEec
Q psy14532 217 HSGDRAGVQCLVTKGDP--PLTISWLKN--GLPI 246 (258)
Q Consensus 217 ~~g~~~~l~C~~~~~~p--~~~~~W~~~--g~~l 246 (258)
.+|+.++|.|.+ .+.| .+.+.|+++ |+.+
T Consensus 231 ~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~g~~~ 263 (438)
T 1qgc_4 231 KPGGSLKLSCTA-SGFIFNRCAMSWVRQTPEKRL 263 (438)
T ss_dssp CTTCCEEEEEEE-ESSCGGGSCEEEEEEETTTEE
T ss_pred ecCCcEEEEEEE-cccccCCcEEEEEECCCCCCc
Confidence 899999999999 5766 679999986 5443
No 76
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.95 E-value=9.9e-27 Score=178.81 Aligned_cols=233 Identities=16% Similarity=0.256 Sum_probs=144.1
Q ss_pred CCcceeeceeeeecCC--CceEEEEEEeec-C-CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEE
Q psy14532 2 HPQLIYKFIQQTLQPG--PPVSLKCIATGN-P-TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g--~~v~l~C~~~~~-~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
||.+...+.......| +++.|.|.+.+. | .+.|.|+|+|..+............ .. .......|.
T Consensus 7 ~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~---------~g--~~~~~s~l~ 75 (323)
T 2wqr_A 7 PPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQE---------GE--LASTQSELT 75 (323)
T ss_dssp CCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEE---------TT--EEEEEEEEE
T ss_pred CCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCcc---------CC--cEEEEEEEE
Confidence 6777655544444445 699999999885 3 4699999999887643110000000 00 011123577
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEe---cCCe--eccCCCcceecCCcEEEEeeeCcc-cCc---eEEEEe
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT---GAPF--VRPMGNVSAIAGEPLYLGCPVAGY-PIE---SITWQK 148 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---~~~~--~~~~~~~~~~~g~~~~l~C~~~~~-~~~---~i~W~~ 148 (258)
|.+. ...|+|.|+|.+.+..+... ..+.+.+. ..+. +..+....+..|+.+.|.|.+.+. |.+ .|.|++
T Consensus 76 i~~~-~~~d~g~Y~C~a~n~~~~~~-~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k 153 (323)
T 2wqr_A 76 LSQK-HWLSDRTYTCQVTYQGHTFE-DSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSR 153 (323)
T ss_dssp EEHH-HHHTTCCEEEEEEETTEEEE-EEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEE
T ss_pred EcHH-HcCCCCcEEEEEEeCCCCcc-eeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEE
Confidence 8877 77899999999999765433 22221111 1121 122333457789999999999875 455 899999
Q ss_pred CC-cccCCCcceE-------EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe----ecCCccccCCCCCcc
Q psy14532 149 GV-QQLPLNRRQK-------VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV----TVPPKIAPFEFQPDL 216 (258)
Q Consensus 149 ~~-~~~~~~~~~~-------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~ 216 (258)
++ ..+....... ....+.|.|.++.. +|+|.|+|.+.|.... ....+.+.+ ..+|.+...+.....
T Consensus 154 ~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~-~D~G~Y~C~a~n~~~~-~~~~~~v~~~~~~~~~P~v~~~~~~~~~ 231 (323)
T 2wqr_A 154 ASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDW-IEGETYQCRVTHPHLP-RALMRSTTKTSGPRAAPEVYAFATPEWP 231 (323)
T ss_dssp TTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHH-HTTCCEEEEEECTTSS-SCEEEEECCCCSCCBCCEEEEEECCCCT
T ss_pred CCCcccccccCCCccCCCCCEEEEEEEEECHHHc-cCCCCEEEEEECCCCC-CCeeeEEEccCCCCCCCEEEEeCCChHH
Confidence 65 4433221111 11233689999987 9999999999997632 112222221 245554443333223
Q ss_pred CCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 217 HSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 217 ~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
..|+.++|.|.+.+.+|. +.|.|++||+.|..+
T Consensus 232 ~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 265 (323)
T 2wqr_A 232 GSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDA 265 (323)
T ss_dssp TCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGG
T ss_pred hcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCC
Confidence 349999999999544554 489999999998765
No 77
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=165.19 Aligned_cols=178 Identities=17% Similarity=0.237 Sum_probs=117.1
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+. ..+.+|++|+|.|.+.+.+. .+.|+|++..+....... .....+++|.|.++
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-----------------~~~~~~~~L~i~~v 65 (196)
T 2d3v_A 5 KATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNP-----------------LEPKNKARFSIPSM 65 (196)
T ss_dssp BCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECC-----------------CSSTTEEEEEESSC
T ss_pred CCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccc-----------------cCCccccEEEeccC
Confidence 688887776 47899999999999987655 999999987654321000 00112457999999
Q ss_pred ccCCCceEEEEEEEeCCcce-eeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGRS-SSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+.+|+|.|+|.+.+..+.. .+..+.|.|.. +|.+...+...+.+|+.++|.|.+.+.| +.+.|++++..+....
T Consensus 66 -~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~ 143 (196)
T 2d3v_A 66 -TEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWT 143 (196)
T ss_dssp -CGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSCC-SEEEEEEC---CCEEE
T ss_pred -ChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccc
Confidence 9999999999999876532 23667788876 3444443345688999999999999888 8999999998764322
Q ss_pred ce-EEec----CCeEEEEecccCCCCcEEEEEEEeCCC----CCccceEEEEe
Q psy14532 158 RQ-KVFP----NGTLLIENVQKDHDRGVYWCTATNKQG----RSSSQNVHISV 201 (258)
Q Consensus 158 ~~-~~~~----~~~l~i~~~~~~~~~g~y~C~~~~~~~----~~~~~~~~l~v 201 (258)
.. .... .+.|.|.+++. +|+|.|+|.+.|..+ +..+..+.|.|
T Consensus 144 ~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 195 (196)
T 2d3v_A 144 LDSQLTPSGQFQALFPVGPVTP-SHRWMLRCYGSRRHILQVWSEPSDLLEIPV 195 (196)
T ss_dssp EECEECTTSCEEEEEECCCCBT-TBCEEEEEEEEETTEEEEECCCCCCEEECC
T ss_pred cccccccCCCceeEEEeeecCc-ccCeeEEEEEEccCCCCccCCCCccEEEEe
Confidence 11 1111 25799999997 999999999998653 23344555443
No 78
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.94 E-value=6.3e-27 Score=167.42 Aligned_cols=176 Identities=16% Similarity=0.148 Sum_probs=120.2
Q ss_pred eeeecCCCceEEEEE---EeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceee---eeCCcEEEeecccC
Q psy14532 11 QQTLQPGPPVSLKCI---ATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKV---FPNGTLLIENVQKD 84 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~---~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~ 84 (258)
++.+..|++++|.|. +.+.|.+.|.|+|++........ .+ ...........+..+... ....+|.|.++ +.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v-~~ 78 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLI-GR-MHHDVIFIEWPFRGFFDIHRSANTFFLVVTAA-NI 78 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEE-EE-EETTEEEECGGGBTTEEEEEETTEEEEEESSC-CG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEE-Ee-cCCceEEeeccccceEEEEEcCCEEEEEEccC-CH
Confidence 467899999999996 45678899999997643321100 00 000000111111111111 12346999999 99
Q ss_pred CCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC----CCcce
Q psy14532 85 HDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP----LNRRQ 159 (258)
Q Consensus 85 ~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~----~~~~~ 159 (258)
+|+|.|+|.+.+..+... ..+.|.|..++.+.. +....+.+|+.+.|.|.+.|.|.|.+.|++++..+. ...+.
T Consensus 79 ~D~G~Y~C~a~n~~g~~~-~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~ 157 (203)
T 4fa8_A 79 SHDGNYLCRMKLGETEVT-KQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGV 157 (203)
T ss_dssp GGCEEEEEEEEETTEEEE-EEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CC
T ss_pred HHCeEEEEEEEcCCCcEE-EEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceE
Confidence 999999999999888776 778888887765543 445667889999999999999999999998765432 23455
Q ss_pred EEecCCeEEE---EecccCCCCcEEEEEEEeCCCC
Q psy14532 160 KVFPNGTLLI---ENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 160 ~~~~~~~l~i---~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
.+..+++|.| .++.. +|.|.|+|.|.|..|+
T Consensus 158 ~~~~~g~l~il~i~~v~~-~D~G~YtC~A~N~~G~ 191 (203)
T 4fa8_A 158 MKEKDGSLSVAVDLSLPK-PWHLPVTCVGKNDKEE 191 (203)
T ss_dssp EECTTSCEEEEEEEEECS-SCCCCEEEEEESSSCE
T ss_pred EEeCCCCEEEEEECCCCH-HHCEEEEEEEEcCCCE
Confidence 6667776655 57776 9999999999999885
No 79
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.94 E-value=3e-26 Score=163.66 Aligned_cols=179 Identities=18% Similarity=0.272 Sum_probs=130.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.. .+.+|++|+|.|.+.+ +.+.+.|+|++..+.... .... .....++|.|.++
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~---~~~~--------------~~~~~~~L~i~~v 65 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR---QNPL--------------EPKNKARFSIPSM 65 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE---ECCC--------------SSSSEEEEEESSC
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc---cccc--------------cCCceEEEEeccC
Confidence 6778878777 7899999999999887 678999999987664320 0000 0012457999999
Q ss_pred ccCCCceEEEEEEEeCCc-ceeeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQG-RSSSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+.+|+|.|+|.+.+..+ ...+..+.|.|.. ++.+.......+.+|+.++|.|.+.+ +.+.+.|++++..+....
T Consensus 66 -~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~ 143 (196)
T 3p2t_A 66 -TEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLC 143 (196)
T ss_dssp -CGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGS
T ss_pred -CcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecCC-CCCEEEEEeCCCccccee
Confidence 99999999999999877 2334677888864 33443333346789999999999977 446899999988664332
Q ss_pred ce----EEecCCeEEEEecccCCCCcEEEEEEEeCCC----CCccceEEEEee
Q psy14532 158 RQ----KVFPNGTLLIENVQKDHDRGVYWCTATNKQG----RSSSQNVHISVT 202 (258)
Q Consensus 158 ~~----~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~----~~~~~~~~l~v~ 202 (258)
.. .....+.|.|.++.. +|+|.|+|.+.|..+ ...+..+.|.|.
T Consensus 144 ~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 144 LRSEHGAQQHQAEFPMSPVTS-VHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp EEEEEEEEEEEEEEEECSCCG-GGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred ecccccccCcceEEEeCCCcc-cCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 21 122456799999997 999999999999865 344566666653
No 80
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.94 E-value=3.7e-26 Score=163.44 Aligned_cols=179 Identities=18% Similarity=0.222 Sum_probs=125.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+. ..+.+|++|+|.|.+.+.+. .+.|+|++..+....... .....+++|.|.++
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-----------------~~~~~~~~L~i~~v 65 (198)
T 1ugn_A 5 KPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-----------------QELVKKGQFPIPSI 65 (198)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-----------------HHHHTTTEEEESSC
T ss_pred CCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-----------------ccCCcccEEEECCC
Confidence 678877776 47899999999999987755 799999987653210000 00113568999999
Q ss_pred ccCCCceEEEEEEEeCC-cc-eeeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCC
Q psy14532 82 QKDHDRGVYWCTATNKQ-GR-SSSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLN 156 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~-~~-~~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~ 156 (258)
+..|+|.|+|.+.+.. +. ..+..+.|.|.. .+.+.......+.+|+.+.|.|.+.+. .+.+.|++++..+...
T Consensus 66 -~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~ 143 (198)
T 1ugn_A 66 -TWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQ 143 (198)
T ss_dssp -CGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSC-CSEEEEEEC------C
T ss_pred -CHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCc
Confidence 9999999999999876 42 223677888876 344444444678899999999999887 6799999998876432
Q ss_pred cce-EEec----CCeEEEEecccCCCCcEEEEEEEeCCCC----CccceEEEEee
Q psy14532 157 RRQ-KVFP----NGTLLIENVQKDHDRGVYWCTATNKQGR----SSSQNVHISVT 202 (258)
Q Consensus 157 ~~~-~~~~----~~~l~i~~~~~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~ 202 (258)
... .... .+.|.|.++.. +|+|.|+|.|.|..+. ..+..+.|.|.
T Consensus 144 ~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 144 CLNSQPHARGSSRAIFSVGPVSP-SRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEEC------CCEEEEEECCCCT-TSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred cccccccCCCcceeEEEecccCc-ccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 211 1111 36799999997 9999999999998642 23566666664
No 81
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.94 E-value=6.8e-26 Score=163.65 Aligned_cols=192 Identities=20% Similarity=0.357 Sum_probs=138.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
|+.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+.... ..... .......+... ..++|.|.++
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~------~~~~~-~~~~~~~r~~~-~~~~L~i~~v 72 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALV------CYNSQ-ITAPYADRVTF-SSSGITFSSV 72 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEE------EETTE-ECGGGTTTEEE-ETTEEEESCC
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEE------ecCCc-ccccccCcEEe-eceeEEEccc
Confidence 4567778888999999999999999988888999999764421110 00000 00111122222 3478999999
Q ss_pred ccCCCceEEEEEEEeCCcc-eeeceEEEEEecCCeecc-CCCcceecCCcEEEEee-eCcccCceEEEEeCCc-ccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGR-SSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCP-VAGYPIESITWQKGVQ-QLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~-~~~~~~~~i~W~~~~~-~~~~~~ 157 (258)
+..|+|.|+|.+.+..+. .....+.|.|..+|.... .....+..|+.+.|.|. +.+.|.+.+.|++++. .+....
T Consensus 73 -~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~ 151 (212)
T 1f97_A 73 -TRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADA 151 (212)
T ss_dssp -CGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC---
T ss_pred -CcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccc
Confidence 999999999999998652 223778888887764432 33456889999999999 6889999999999998 776433
Q ss_pred c---------eEE-ecCCeEEEEecccCCCCcEEEEEEEeCCCCC-ccceEEEEeec
Q psy14532 158 R---------QKV-FPNGTLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHISVTV 203 (258)
Q Consensus 158 ~---------~~~-~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~~ 203 (258)
. +.. ...+.|.|.++.. +|.|.|+|.|.|..+.. .+..+.|.|..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 152 KKTRAFMNSSFTIDPKSGDLIFDPVTA-FDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp --CBSCSSSCEEECTTTCCEEESSCCG-GGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred cccccccCceeEecCCCceEEEEecCh-hhCcEEEEEEccccCCccccceEEEEEEE
Confidence 2 122 2456899999997 99999999999998865 46777777764
No 82
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.94 E-value=1.9e-26 Score=178.73 Aligned_cols=237 Identities=18% Similarity=0.334 Sum_probs=144.2
Q ss_pred eeceeeeecCCCceEEEEEEeec--CCCeEEEeeC--CEeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++++|.|.+.+. +.+.+.|+|+ +..+.... ..............+..|..+.. +++|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIG--YFSPGNDDFKYNERFKGKATLTADTSASTAYVE 82 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEE--EEETTTTEEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEE--EEecCCCceEECcccCCcEEEEEecCCCEEEEE
Confidence 45567889999999999999876 3578999986 32211000 00000000000111222222222 35799
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cC-ceEEEEeCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PI-ESITWQKGV 150 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~i~W~~~~ 150 (258)
|.++ +.+|+|.|+|.+.+..+... ....|.|.. +|.+.. .....+..|+.+.|.|.+.|. |. +.+.|++++
T Consensus 83 I~~v-~~~D~G~Y~C~~~n~~~~~~-~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g 160 (344)
T 1za6_B 83 LSSL-RSEDTAVYFCTRSLNMAYWG-QGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGA 160 (344)
T ss_dssp ECSC-CGGGCEEEEEEETTTTCEEC-CCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTT
T ss_pred ECCC-CcccCEEEEEEEecCcceec-CcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCC
Confidence 9999 99999999999998543333 556777763 232222 223446789999999999886 54 699999988
Q ss_pred cccCCCcc-eEEec------CCeEEEEecccCCCCcEEEEEEEeCCCCCc-cceEEE----------------------E
Q psy14532 151 QQLPLNRR-QKVFP------NGTLLIENVQKDHDRGVYWCTATNKQGRSS-SQNVHI----------------------S 200 (258)
Q Consensus 151 ~~~~~~~~-~~~~~------~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~-~~~~~l----------------------~ 200 (258)
..+..... ..... .+.|.|.++.. +| |.|+|.|.|..+... ...+.+ .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 238 (344)
T 1za6_B 161 LTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGG 238 (344)
T ss_dssp BCTTEEECCCEECTTSCEEEEEEEEEETTHH-HH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------
T ss_pred ccCceeECCCeECCCCCEEEEEEEEEcHHHc-CC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCC
Confidence 76421100 00111 23688888876 67 999999999865311 111111 1
Q ss_pred eecCCccccCCCCCccCCCCeeeEEEEeccCCC-CceeEEEECCEecccc
Q psy14532 201 VTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP-PLTISWLKNGLPILSA 249 (258)
Q Consensus 201 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~l~~~ 249 (258)
+..+|.+...+.......|+.++|.|.+.+.+| .+.+.|++||+.+...
T Consensus 239 ~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~ 288 (344)
T 1za6_B 239 QPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNY 288 (344)
T ss_dssp CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSE
T ss_pred CCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCc
Confidence 123454443332222334667999999954355 4799999999988654
No 83
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.94 E-value=9.6e-26 Score=165.00 Aligned_cols=188 Identities=21% Similarity=0.349 Sum_probs=137.9
Q ss_pred CCcceeec----eeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEE
Q psy14532 2 HPQLIYKF----IQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 2 ~p~~~~~~----~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
+|.+...+ ....+.+|++++|.|.+.+.|.+.+.|++++..+......... .....+.+|.
T Consensus 15 ~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~---------------~~~~~~~~L~ 79 (231)
T 3ojm_B 15 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGY---------------KVRNQHWSLI 79 (231)
T ss_dssp EEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCC---------------EEEGGGTEEE
T ss_pred CCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccce---------------eeecCcceEE
Confidence 45554444 6778999999999999999888999999999887544211111 1122356799
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEecCC----eec--cCCCcceecCCcEEEEeeeCcccCceEEEEe---
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP----FVR--PMGNVSAIAGEPLYLGCPVAGYPIESITWQK--- 148 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~----~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~--- 148 (258)
|.++ +..|+|.|+|.+.+..+... ..+.|.|...+ ... .+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 80 i~~~-~~~d~G~Y~C~~~n~~~~~~-~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~ 157 (231)
T 3ojm_B 80 MESV-VPSDKGNYTCVVENEYGSIN-HTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVE 157 (231)
T ss_dssp ECSC-CGGGCEEEEEEEEETTEEEE-EEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECC
T ss_pred EecC-CcccCEEEEEEEecccCccc-ccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCC
Confidence 9999 99999999999999877665 77778886532 222 1345678899999999999999999999999
Q ss_pred -CCcccCCCcceE----------EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccc
Q psy14532 149 -GVQQLPLNRRQK----------VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIA 208 (258)
Q Consensus 149 -~~~~~~~~~~~~----------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~ 208 (258)
++..+....... ....+.|.|.++.. +|+|.|+|.+.|..+. .+..+.|.|..+|..+
T Consensus 158 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 158 KNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTE-ADAGEYICKVSNYIGQ-ANQSAWLTVLPKQQAP 226 (231)
T ss_dssp BTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEECCC---
T ss_pred CCCccccCCCcceEeEecccccccCCccEEEEecCCH-HHCeEEEEEEEeccce-EeeEEEEEEecCCCCC
Confidence 666554332111 11234699999997 9999999999999874 4677888888776543
No 84
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.94 E-value=3.5e-25 Score=183.18 Aligned_cols=225 Identities=16% Similarity=0.197 Sum_probs=155.4
Q ss_pred eeeceeeeecCCCceEEEEEEeecCCC---eEEEeeCCEeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNPTP---HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~~~---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
+..|.++.+.+|++++|.|.+.+.+.+ .+.|+|++..+.... .+.........+..|..+.. ..+|.
T Consensus 4 i~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~-----~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~ 78 (585)
T 2ocw_A 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCIT-----LISSEGYVSSKYAGRANLTNFPENGTFVVN 78 (585)
T ss_pred ccCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceE-----EEECCCcccceeeceEEEEecCCCCEEEEE
Confidence 346778899999999999999886543 899999875321000 00000000001111222211 23699
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeec-cCCCcceecCCcEEEEeeeCcc-cCceEEEEeCCcccC-
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGY-PIESITWQKGVQQLP- 154 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~~i~W~~~~~~~~- 154 (258)
|.++ +.+|+|.|+|.+.+..+... ..+.|.|..+|.+. .+....+.+|+.+.|.|.+.+. +.+.+.|++++....
T Consensus 79 I~~v-~~~D~G~Y~C~~~n~~~~~~-~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~ 156 (585)
T 2ocw_A 79 IAQL-SQDDSGRYKCGLGINSRGLS-FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPV 156 (585)
T ss_pred ECCC-CcccCEEEEEEcccCCCCce-EEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCce
Confidence 9999 99999999999998877655 77888998777544 3556678899999999999864 457899999875421
Q ss_pred ------------CCcceEEecCC------eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCcc
Q psy14532 155 ------------LNRRQKVFPNG------TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDL 216 (258)
Q Consensus 155 ------------~~~~~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~ 216 (258)
...+..+..++ .|.|.++.. +|+|.|+|.+.|..+. .+..+.|.|..++ +....+
T Consensus 157 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~-----p~~~~~ 229 (585)
T 2ocw_A 157 LVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRL-SDAGQYLCQAGDDSNS-NKKNADLQVLKPE-----PELVYE 229 (585)
T ss_pred EEecCCcccCccccCcEEEEeccCCCcEEEEEEccCCh-hHCeEEEEEeccCCcc-ccceEEEEEccCC-----CceeEE
Confidence 12333443333 699999997 9999999999988774 5567778877543 223456
Q ss_pred CCCCeeeEEEEeccCCCC-ceeEEE-ECCE
Q psy14532 217 HSGDRAGVQCLVTKGDPP-LTISWL-KNGL 244 (258)
Q Consensus 217 ~~g~~~~l~C~~~~~~p~-~~~~W~-~~g~ 244 (258)
.+|+.+.|.|.+....|. +.+.|+ ++|.
T Consensus 230 ~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~ 259 (585)
T 2ocw_A 230 DLRGSVTFHCALGPEVANVAKFLCRQSSGE 259 (585)
T ss_pred cCCCcEEEEEEcCCCCCCceEEEEEeCCCC
Confidence 789999999998322233 789997 8873
No 85
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.94 E-value=2.4e-25 Score=167.97 Aligned_cols=181 Identities=25% Similarity=0.428 Sum_probs=139.2
Q ss_pred CCcceeec-eeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKF-IQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~-~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ..... .......|.|.+
T Consensus 98 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~---~~~~~-------------~~~~~~~L~i~~ 161 (284)
T 2rik_A 98 PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESS---KFRMS-------------FVESVAVLEMYN 161 (284)
T ss_dssp CCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSS---SEEEE-------------EETTEEEEEECS
T ss_pred CCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCC---cEEEE-------------EcCCEEEEEECC
Confidence 45554333 34568899999999999998999999999998876541 11111 011235799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcce
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~ 159 (258)
+ +..|+|.|+|.+.+..+... ..+.|.|..+|.+.. +....+..|+.+.|.|.+.+.|.+.+.|++++..+....+.
T Consensus 162 ~-~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~ 239 (284)
T 2rik_A 162 L-SVEDSGDYTCEAHNAAGSAS-SSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKY 239 (284)
T ss_dssp C-CGGGCEEEEEEEECSSCEEE-EEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTE
T ss_pred C-CcccCEEEEEEEEcCCCcee-EEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCE
Confidence 9 99999999999999988766 788899988876543 44567889999999999999999999999999888766655
Q ss_pred EEecC---CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 160 KVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 160 ~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
.+... ..|.|.++.. +|.|.|+|.|.|..|. ....+.|.|.
T Consensus 240 ~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~-~~~~~~l~V~ 283 (284)
T 2rik_A 240 KIMSENFLTSIHILNVDS-ADIGEYQCKASNDVGS-YTCVGSITLK 283 (284)
T ss_dssp EEEEETTEEEEEECSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEC
T ss_pred EEEEcCCEEEEEEcCCCc-ccCEEEEEEEEeCCCc-eeEEEEEEEc
Confidence 54433 3688999997 9999999999999884 4455566553
No 86
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.94 E-value=8.4e-26 Score=157.65 Aligned_cols=164 Identities=21% Similarity=0.277 Sum_probs=129.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecC-CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNP-TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.+...+....+.+|+++.|.|.+.+.+ .+.+.|++++..+... ...+.|.+
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~--------------------------~~~~~~~~ 57 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH--------------------------TQPSYRFK 57 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC--------------------------CSSEEEEE
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC--------------------------ccceEEEe
Confidence 35566777777899999999999998875 5699999999877643 34677889
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeC-cccCceEEEEeCCcccCCCcce
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVA-GYPIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~i~W~~~~~~~~~~~~~ 159 (258)
+ +..|+|.|+|.+.+... +..+.|.|..++.........+.+|+.+.|.|.+. +.|.+.+.|++++..+..
T Consensus 58 ~-~~~d~G~Y~C~~~~~~~---s~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~---- 129 (170)
T 3ry4_A 58 A-NNNDSGEYTCQTGQTSL---SDPVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF---- 129 (170)
T ss_dssp C-CGGGCEEEEEEETTSBC---CCCEEEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE----
T ss_pred c-ccccCeEEEEEEeCCCc---eEeEEEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc----
Confidence 9 99999999999986432 25577888877655555566788999999999995 456689999999887542
Q ss_pred EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 160 KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 160 ~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
...++.|.|.++.. +|.|.|+|.+.|..+...+..+.|.|
T Consensus 130 -~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 130 -SHLDPTFSIPQANH-SHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp -ESSCCEEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -cCCCCeEEEEeccc-cCCEEEEEEEEeCcCccccccEEEEE
Confidence 22456799999997 99999999999988755666666665
No 87
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.94 E-value=8.4e-26 Score=177.62 Aligned_cols=169 Identities=30% Similarity=0.517 Sum_probs=134.9
Q ss_pred ceeeeecCCCceEEEEEEeecCCCeEEEeeC-CEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCc
Q psy14532 9 FIQQTLQPGPPVSLKCIATGNPTPHISWKLD-GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDR 87 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 87 (258)
+....+.+|+++.|.|.+.+.|.+.+.|+|+ +..+... ... ...+++|.|.++ +.+|+
T Consensus 212 ~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~---~~~-----------------~~~~~~L~I~~v-~~~D~ 270 (384)
T 3kld_A 212 PETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK---ARR-----------------HKSNGILEIPNF-QQEDA 270 (384)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT---CEE-----------------CTTSCEEEECSC-CGGGC
T ss_pred CCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc---cee-----------------cCCCcEEEECCC-ChhhC
Confidence 4566788999999999999999999999995 4344322 110 112568999999 99999
Q ss_pred eEEEEEEEeCCcceeeceEEEEEecCCee-ccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCe
Q psy14532 88 GVYWCTATNKQGRSSSQNVHISVTGAPFV-RPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGT 166 (258)
Q Consensus 88 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~ 166 (258)
|.|+|.+.|..|... ....|.|..+|.+ .......+..|+.+.|.|.+.|.|.+.+.|++++..+....+..+ .++.
T Consensus 271 G~Y~C~a~N~~G~~~-~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~-~~~~ 348 (384)
T 3kld_A 271 GSYECVAENSRGKNV-AKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGT 348 (384)
T ss_dssp EEEEEEEEETTEEEE-EEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEE-ETTE
T ss_pred EEEEEEEEcCCCeEE-EEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEE-eCCE
Confidence 999999999988776 6777888766643 345567788999999999999999999999999998876666554 5678
Q ss_pred EEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 167 LLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 167 l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
|.|.++.. +|+|.|+|.|.|..|. ......|.|.
T Consensus 349 L~i~~v~~-~D~G~Y~C~A~N~~G~-~~~~a~L~V~ 382 (384)
T 3kld_A 349 LNITIVNL-SDAGMYQCVAENKHGV-IFSSAELSVI 382 (384)
T ss_dssp EEESSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEC
T ss_pred EEEeecCh-hhCEEEEEEEEeCCce-EEeceEEEEe
Confidence 99999997 9999999999999884 4455666664
No 88
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.94 E-value=6.1e-26 Score=181.73 Aligned_cols=229 Identities=14% Similarity=0.214 Sum_probs=144.8
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec-CCC-eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN-PTP-HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
|.+........+.+|+.++|.|.+.+. |.+ .+.|++++..+..... ... .. . ......+.|.|.+
T Consensus 124 P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~-~~~-~~---------~--~~~~~~s~L~i~~ 190 (444)
T 1igt_B 124 PSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTF-PAV-LQ---------S--DLYTLSSSVTVTS 190 (444)
T ss_dssp CEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEC-CCE-EE---------T--TEEEEEEEEEECS
T ss_pred CceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEec-Ccc-cc---------C--CcEEEEEEEEEch
Confidence 444433333345799999999999885 766 9999998765321100 000 00 0 0111234688999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEE------------------ecCCee-ccCCCcc--eecCCcEEEEeeeCcc
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISV------------------TGAPFV-RPMGNVS--AIAGEPLYLGCPVAGY 139 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v------------------~~~~~~-~~~~~~~--~~~g~~~~l~C~~~~~ 139 (258)
+ ...| |.|+|.+.+..+... ....+.+ ..++.+ ..++... +..|+.+.|.|.+.+.
T Consensus 191 ~-~~~d-g~Y~C~a~n~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~ 267 (444)
T 1igt_B 191 S-TWPS-QSITCNVAHPASSTK-VDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDV 267 (444)
T ss_dssp T-TTTT-SCCEEEEEETTTTEE-EEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEE
T ss_pred h-hcCC-CeEEEEEEeCCCCcc-eEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeec
Confidence 8 8889 999999999887643 2223222 112222 1222222 4789999999999887
Q ss_pred c----CceEEEEeCCcccCCCcce--EE------ecCCeEEEEecccCCCCcEEEEEEEeCCCCCc-cceEEE--EeecC
Q psy14532 140 P----IESITWQKGVQQLPLNRRQ--KV------FPNGTLLIENVQKDHDRGVYWCTATNKQGRSS-SQNVHI--SVTVP 204 (258)
Q Consensus 140 ~----~~~i~W~~~~~~~~~~~~~--~~------~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~-~~~~~l--~v~~~ 204 (258)
+ .+.+.|++++..+...... .. ...+.|.|.++.. +|+|.|+|.|.|..+... ...+.+ .+..+
T Consensus 268 ~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~ 346 (444)
T 1igt_B 268 SEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDW-MSGKEFKCKVNNKDLPAPIERTISKPKGSVRA 346 (444)
T ss_dssp CTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHH-HTTCEEEEEEECTTCSSCEEEEEECCCCCCBC
T ss_pred ccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHh-ccCCcEEEEEEcCCCCCceEEEEeccCCCCCC
Confidence 3 3599999998776432211 11 1234689999987 999999999999876431 222222 34456
Q ss_pred CccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEeccc
Q psy14532 205 PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILS 248 (258)
Q Consensus 205 p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~ 248 (258)
|.+...+.......++.++|.|.+.+.+|.+ .|.|++||..+..
T Consensus 347 P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 391 (444)
T 1igt_B 347 PQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELN 391 (444)
T ss_dssp CEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSS
T ss_pred CEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEccc
Confidence 6655444332223344599999995446665 9999999998854
No 89
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=165.42 Aligned_cols=182 Identities=27% Similarity=0.415 Sum_probs=131.5
Q ss_pred ceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCce
Q psy14532 9 FIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRG 88 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G 88 (258)
+....+.+|+++.|.|.+.+.|.+.+.|++++..+......... .....+.+|.|.++ +..|+|
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~---------------~~~~~~~~L~i~~v-~~~d~G 85 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGI---------------KLRHQQWSLVMESV-VPSDRG 85 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCC---------------EEEGGGTEEEECSC-CGGGCE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccce---------------eeeccceEEEEEeC-CcccCE
Confidence 34678899999999999999888899999999887544211111 11223568999999 999999
Q ss_pred EEEEEEEeCCcceeeceEEEEEecC----Ceec--cCCCcceecCCcEEEEeeeCcccCceEEEEe----CCcccCCCcc
Q psy14532 89 VYWCTATNKQGRSSSQNVHISVTGA----PFVR--PMGNVSAIAGEPLYLGCPVAGYPIESITWQK----GVQQLPLNRR 158 (258)
Q Consensus 89 ~Y~C~~~~~~~~~~~~~~~l~v~~~----~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~----~~~~~~~~~~ 158 (258)
.|+|.+.+..+... ..+.|.|... +.+. ......+..|+.+.|.|.+.+.|.+.+.|++ ++..+.....
T Consensus 86 ~Y~C~~~~~~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~ 164 (241)
T 3grw_A 86 NYTCVVENKFGSIR-QTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGT 164 (241)
T ss_dssp EEEEEEEETTEEEE-EEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTC
T ss_pred EEEEEEeecCCceE-EEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCc
Confidence 99999999877665 6677777653 2221 2445667889999999999999999999999 7766654332
Q ss_pred eEE-----------ecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcccc
Q psy14532 159 QKV-----------FPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAP 209 (258)
Q Consensus 159 ~~~-----------~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~ 209 (258)
... .....|.|.++.. +|.|.|+|.|.|..+. .+..+.|.|..+|....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~~~p~~~~ 224 (241)
T 3grw_A 165 PYVTVLKSWISESVEADVRLRLANVSE-RDGGEYLCRATNFIGV-AEKAFWLSVHGPRAAEE 224 (241)
T ss_dssp CCEEEEEEEECSBSEEEEEEEECSCCG-GGCEEEEEEEECSSCE-EEEEEEEEC--------
T ss_pred eeeeeeeEeeeeecCCceEEEECcCCc-ccCcEEEEEEecCcce-EEEEEEEEecCCCCCCc
Confidence 111 1234699999987 9999999999999884 46778888887776543
No 90
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.94 E-value=2.5e-25 Score=178.51 Aligned_cols=215 Identities=15% Similarity=0.208 Sum_probs=141.0
Q ss_pred CCcce-eeceeeeecCCCceEEEEEEeecCCC---eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEE
Q psy14532 2 HPQLI-YKFIQQTLQPGPPVSLKCIATGNPTP---HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 2 ~p~~~-~~~~~~~~~~g~~v~l~C~~~~~~~~---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
+|.+. ..+.+..+.+|+++.|.|.+.+.+.+ .|.|+|++..+.... ... ...+++|.
T Consensus 85 ~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~---~~~----------------~~~~~~L~ 145 (450)
T 1z7z_I 85 TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP---AVG----------------EPAEVTTT 145 (450)
T ss_dssp CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE---CCT----------------TTEEEEEE
T ss_pred CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccc---ccc----------------cccceEEE
Confidence 45543 56666889999999999999988777 899999998775331 000 01235799
Q ss_pred EeecccCCCceEEEEEEEeCCccee-------eceEEEEEecCCeecc--CCCcceecCCcEEEEeeeCcc-c--CceEE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSS-------SQNVHISVTGAPFVRP--MGNVSAIAGEPLYLGCPVAGY-P--IESIT 145 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~-------~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~-~--~~~i~ 145 (258)
|.++ +.+|+|.|+|.+.|..+... +....|.|...+...+ .....+.+|+.+.|.|.+.+. | .+.+.
T Consensus 146 i~~~-~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~ 224 (450)
T 1z7z_I 146 VLVR-RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVH 224 (450)
T ss_dssp EECC-SSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEE
T ss_pred EEee-ccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEE
Confidence 9999 99999999999999865321 1344555553311111 112578899999999999887 6 78999
Q ss_pred EEeCCcccCCCcceEEecCCeEEEE---ecccCCCCc--EEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCC
Q psy14532 146 WQKGVQQLPLNRRQKVFPNGTLLIE---NVQKDHDRG--VYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGD 220 (258)
Q Consensus 146 W~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~~~~g--~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~ 220 (258)
|++++..+.. +.....+ .+.+. ++.. +|.| .|+|.+.|..+. ......|.|...|..........+.+|+
T Consensus 225 W~~~~~~~~~--~~~~~~~-~~~~~~~~~v~~-~d~G~~~Y~C~a~n~~g~-~~~~~~l~V~~~~~p~i~~~~~~v~~G~ 299 (450)
T 1z7z_I 225 LALGDQRLNP--TVTYGND-SFSAKASVSVTA-EDEGTQRLTCAVILGNQS-QETLQTVTIYSFPAPNVILTKPEVSEGT 299 (450)
T ss_dssp EEETTEECCC--EEEEETT-EEEEEEEEECCG-GGCEEEEEEEEEEETTEE-EEEEEEEEEECCCCCEEEESCSEEETTC
T ss_pred EeCCCEeCCc--eEEecCC-ceeEEEEEEeEh-hhCCcEEEEEEEccCCcc-EEEEEEEEEecCCCCeEecCCeeEeCCC
Confidence 9999987765 2222222 22222 5666 8999 999999998763 4456677777643322223345788999
Q ss_pred eeeEEEEeccCCCCceeEEEECCEec
Q psy14532 221 RAGVQCLVTKGDPPLTISWLKNGLPI 246 (258)
Q Consensus 221 ~~~l~C~~~~~~p~~~~~W~~~g~~l 246 (258)
.++|.|.+. |.+.+.| +|..+
T Consensus 300 ~v~l~C~~~---p~p~i~W--~g~~~ 320 (450)
T 1z7z_I 300 EVTVKCEAH---PRAKVTL--NGVPA 320 (450)
T ss_dssp EEEEEEEC------------------
T ss_pred cEEEEEecC---CCCEeEE--CCEEc
Confidence 999999994 8889999 88877
No 91
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=1.5e-25 Score=158.91 Aligned_cols=178 Identities=17% Similarity=0.195 Sum_probs=127.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.. .+.+|++|+|.|.+.+ +...+.|+|++..+..... .. .....+++|.|.++
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~--~~---------------~~~~~~~~L~I~~v 64 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP--KP---------------PERINKVKFYIPDM 64 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC--SS---------------CTTCCEEEEEESSC
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCccccccc--cc---------------CCCcceeEEEeCcC
Confidence 6788877776 7899999999999875 3468999999876542100 00 00113457999999
Q ss_pred ccCCCceEEEEEEEeCCcc-eeeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGR-SSSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+..|+|.|+|.+.+..+. ..+..+.|.|.. +|.+...+...+.+|+.++|.|.+.+ +.+.+.|++++..+...
T Consensus 65 -~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~- 141 (188)
T 1oll_A 65 -NSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQ- 141 (188)
T ss_dssp -CGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEE-
T ss_pred -CcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcCC-CCCEEEEEECCcccccc-
Confidence 999999999999886442 223667788764 34444333456889999999999876 45689999998776531
Q ss_pred ceEEecCCeEEEEecccCCCCcEEEEEEEeCC--CCCccceEEEEee
Q psy14532 158 RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQ--GRSSSQNVHISVT 202 (258)
Q Consensus 158 ~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~--~~~~~~~~~l~v~ 202 (258)
.......+.|.|.+++. +|+|.|+|.+.+.. ....+..+.|.|.
T Consensus 142 ~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 142 RGYGKVQAEFPLGPVTT-AHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EEECSSEEEEEEEECCG-GGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred ccCCCceeEEEECCCCc-CCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 11223446799999998 99999999999864 2345667777664
No 92
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=158.62 Aligned_cols=168 Identities=17% Similarity=0.218 Sum_probs=124.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.. .+.+|++++|.|.+.+ +.+.+.|+|++... ...+++|.|.++
T Consensus 8 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------------------------~~~~~~L~i~~v 59 (184)
T 2gi7_A 8 KPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------------------------YQDQAVLFIPAM 59 (184)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------------------------EESSSEEEESSC
T ss_pred CCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------------------------cCcccEEEECcC
Confidence 6777777764 7899999999999887 67899999987540 113568999999
Q ss_pred ccCCCceEEEEEEEeCCcc-eeeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGR-SSSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+.+|+|.|+|.+.+..+. ..+..+.|.|.. +|.+...+...+.+|+.+.|.|.+.+.+ +.+.|++++..+....
T Consensus 60 -~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~ 137 (184)
T 2gi7_A 60 -KRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKN 137 (184)
T ss_dssp -CGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCC
T ss_pred -ChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCC-cEEEEEECCCcCccee
Confidence 999999999999997653 233667778743 3444333355678999999999987644 6899999998765422
Q ss_pred ceEEecCCeEEEEecccCCCCcEEEEEEEeCCCC----CccceEEEEe
Q psy14532 158 RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGR----SSSQNVHISV 201 (258)
Q Consensus 158 ~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~----~~~~~~~l~v 201 (258)
. .....+.|.|.++.. +|+|.|+|.+.|.... ..+..+.|.|
T Consensus 138 ~-~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 183 (184)
T 2gi7_A 138 P-ERWYRASFPIITVTA-AHSGTYRCYSFSSRDPYLWSAPSDPLELVV 183 (184)
T ss_dssp C-CEEEEESSSEEEETT-CCSEEEEEEEECTTSTTBCCCCCCCEEEEC
T ss_pred c-CCCceEEEEEccCCc-cCCeEEEEEEEeCCCCcccCCCCCcEEEEe
Confidence 1 223456789999997 9999999999997532 2345555544
No 93
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.94 E-value=7.6e-26 Score=163.95 Aligned_cols=182 Identities=18% Similarity=0.241 Sum_probs=128.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC--cEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG--TLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~ 79 (258)
+|.|...+. ..+.+|++|+|.|.+.+ +.+.+.|+|+|..+.... ... ......+ +|.|.
T Consensus 9 ~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~--~~~---------------~~~~~~~~~~L~I~ 69 (218)
T 1uct_A 9 MPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREI--GRR---------------LKFWNETDPEFVID 69 (218)
T ss_dssp CCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEEC--SEE---------------CC----CCCEEEEC
T ss_pred CCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccc--ccc---------------CCCCcceeeEEEEc
Confidence 677877766 57899999999999876 577999999875443210 000 0001234 89999
Q ss_pred ecccCCCceEEEEEEEeCCcc-eeeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC
Q psy14532 80 NVQKDHDRGVYWCTATNKQGR-SSSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL 155 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~ 155 (258)
++ +.+|+|.|+|.+.+..+. ..+..+.|.|.. +|.+...+...+.+|+.++|.|...+.+.+.+.|+|++..+..
T Consensus 70 ~v-~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~ 148 (218)
T 1uct_A 70 HM-DANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLP 148 (218)
T ss_dssp SC-CGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCC
T ss_pred cc-ccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccc
Confidence 99 999999999999997642 233667788764 3444333355788999999999666667789999999987654
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCC----CCccceEEEEeecCC
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG----RSSSQNVHISVTVPP 205 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~----~~~~~~~~l~v~~~p 205 (258)
. .......+.|.|.+++. +|+|.|+|.+.+... ...+..+.|.|...+
T Consensus 149 ~-~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 149 Q-HQSGEHPANFSLGPVDL-NVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp S-EEECSSSEEEECCSCCG-GGCEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred c-ccCCCccCEEEEccCCc-ccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 2 12223456899999997 999999999998632 245677778777543
No 94
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.94 E-value=8.9e-26 Score=162.23 Aligned_cols=178 Identities=15% Similarity=0.255 Sum_probs=122.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEee-cCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATG-NPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.|... .+..+.+|+.+.|.|.+.+ .|.+.+.|+++|..+... .++.+... . .....+|.|.+
T Consensus 3 ~p~~~~~-~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~---~~~~~~~~--------~---~~g~~~L~I~~ 67 (207)
T 3rbs_A 3 DPFTKSE-LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG---PKYKMHID--------R---NTGIIEMFMEK 67 (207)
T ss_dssp ---CCEE-EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSS---SSCEEEEC--------T---TTCEEEEEESC
T ss_pred CCeeecC-CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccC---CCEEEEEe--------C---CCCEEEEEECC
Confidence 5677654 4688999999999999865 688999999999988654 12111100 0 00122699999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEe---------------------cCCeeccCCCcceecCCcEEEEeeeCcc
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVT---------------------GAPFVRPMGNVSAIAGEPLYLGCPVAGY 139 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---------------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 139 (258)
+ +.+|+|.|+|.+.|. ... ....+.+. .+|.+.......+.+|+.+.|.|.+.|.
T Consensus 68 v-~~~D~G~Y~C~a~Ng--~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~ 143 (207)
T 3rbs_A 68 L-QDEDEGTYTFQLQDG--KAT-NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANI 143 (207)
T ss_dssp C-CGGGCEEEEEEEEET--TEE-EEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESC
T ss_pred C-ChhhCEEEEEEEECC--CeE-EEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCC
Confidence 9 999999999999993 332 22232221 1232222123567889999999999998
Q ss_pred -cCceEEEEeCCcccCCCcceEEec-CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEE
Q psy14532 140 -PIESITWQKGVQQLPLNRRQKVFP-NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHIS 200 (258)
Q Consensus 140 -~~~~i~W~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~ 200 (258)
|.+.+.|++++..+....++.... ..+|.|.++.. +|+|.|+|.|.|..|. ....+.|.
T Consensus 144 ~P~p~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~-~~~~~~L~ 204 (207)
T 3rbs_A 144 KKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSK-KDAGIYEVILKDDRGK-DKSRLKLV 204 (207)
T ss_dssp CTTCEEEEEETTEEECCCCCCCCSSEEEEEEETTCCG-GGCEEEEEEEEETTEE-EEEEEEEC
T ss_pred CCCCEEEEEECCEECCCCCceEcCCCEEEEEECCCCc-ccCEEEEEEEEcCCCE-EEEEEEEe
Confidence 899999999998886654432211 23699999998 9999999999999874 33444443
No 95
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.94 E-value=2.7e-25 Score=168.21 Aligned_cols=184 Identities=23% Similarity=0.407 Sum_probs=136.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... .+ .....+++|.|.++
T Consensus 98 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~-~~----------------~~~~~~~~L~i~~v 160 (291)
T 2wim_A 98 KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISD-NR----------------FAMLANNNLQILNI 160 (291)
T ss_dssp CCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCC-SS----------------EEECTTSCEEETTC
T ss_pred CcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCC-ce----------------EEEccCCCEEEEec
Confidence 45555556677889999999999999988899999999876653211 11 12224668999999
Q ss_pred ccCCCceEEEEEEEeCCcc-eeeceEEEEEecCCeeccCC---CcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGR-SSSQNVHISVTGAPFVRPMG---NVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~~---~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
...|+|.|+|.+.+..+. .....+.+.+..+|.+.... ...+.+|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 161 -~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~ 239 (291)
T 2wim_A 161 -NKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE 239 (291)
T ss_dssp -CGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTT
T ss_pred -chhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCc
Confidence 999999999999987643 33356677777776554332 3457789999999999999999999999999887666
Q ss_pred ceEEec-CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 158 RQKVFP-NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 158 ~~~~~~-~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
+..+.. ...|.|.++.. +|+|.|+|.|.|..| .....+.|.|..++
T Consensus 240 ~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~G-~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 240 KYILKGSNTELTVRNIIN-SDGGPYVCRATNKAG-EDEKQAFLQVFVQH 286 (291)
T ss_dssp TEEECSTTCEEEEESCCS-TTCEEEEEEEEETTE-EEEEEEEEEC----
T ss_pred cEEEcCCccEEEEeeCCc-ccCEEEEEEEEECCC-ceeeeEEEEEEEec
Confidence 655433 46799999997 999999999999988 45567777777654
No 96
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.94 E-value=3.1e-25 Score=164.27 Aligned_cols=220 Identities=15% Similarity=0.179 Sum_probs=127.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+. ..+.+|++|+|.|.+.+ +.+.+.|+|++..+........ ......+++|.|.++
T Consensus 7 kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~---------------~~~~~~~~~L~I~~v 69 (257)
T 1b6u_A 7 KPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGE---------------HHDGVSKANFSIGPM 69 (257)
T ss_dssp CCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECB---------------CCTTCEEEEEEECSC
T ss_pred CCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeee---------------ccCCCceEEEEeecC
Confidence 577776665 67889999999999874 4678999998764421100000 000113467999999
Q ss_pred ccCCCceEEEEEEEeCCc----ceeeceEEEEEecC---CeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC
Q psy14532 82 QKDHDRGVYWCTATNKQG----RSSSQNVHISVTGA---PFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP 154 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~ 154 (258)
+.+|+|.|+|.+.+... ...+..+.|.|... |.+...+...+.+|++++|.|.+.+. .+.+.|+|++..+.
T Consensus 70 -~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~ 147 (257)
T 1b6u_A 70 -MQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSS-YDMYHLSREGEAHE 147 (257)
T ss_dssp -CTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSC-CSEEEEEETTSSCE
T ss_pred -CcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCC-CcEEEEEECCcccC
Confidence 99999999999986431 22346677888643 44443344568899999999999875 46899999998765
Q ss_pred CCcceEEe----cCCeEEEEecccCCCCcEEEEEEEeCC----CCCccceEEEEeecCCccccC-CCCCccCCCCeeeEE
Q psy14532 155 LNRRQKVF----PNGTLLIENVQKDHDRGVYWCTATNKQ----GRSSSQNVHISVTVPPKIAPF-EFQPDLHSGDRAGVQ 225 (258)
Q Consensus 155 ~~~~~~~~----~~~~l~i~~~~~~~~~g~y~C~~~~~~----~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~ 225 (258)
........ .++.|.|.+++ |+|.|+|.+.+.. ....+..+.|.|..+|..... +.......|..+.|.
T Consensus 148 ~~~~~~~~~~~~~~~~l~I~~v~---D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~ 224 (257)
T 1b6u_A 148 RRFSAGPKVNGTFQADFPLGPAT---HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLH 224 (257)
T ss_dssp ECCBCBCCSSSCCBEEEEEEECC---SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC---------------------
T ss_pred cccccccccCCceeEEEEecccc---cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEE
Confidence 33211111 24578998885 9999999999753 224567889999988765522 222345669999999
Q ss_pred EEeccCCCCceeEEEECCEe
Q psy14532 226 CLVTKGDPPLTISWLKNGLP 245 (258)
Q Consensus 226 C~~~~~~p~~~~~W~~~g~~ 245 (258)
|.+ +.+...+.|..-+-.
T Consensus 225 ~~~--~~~~~~~~~~~~~~~ 242 (257)
T 1b6u_A 225 AAA--EQKLISEEDLNLDLV 242 (257)
T ss_dssp --------------------
T ss_pred EEE--cchHHHHHHhhhhhc
Confidence 987 667778899864433
No 97
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.93 E-value=3.6e-25 Score=167.54 Aligned_cols=182 Identities=24% Similarity=0.408 Sum_probs=137.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+..... .+ .....++.|.|.++
T Consensus 100 ~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~-~~----------------~~~~~~~~L~i~~~ 162 (291)
T 1qz1_A 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKD-VR----------------FIVLSNNYLQIRGI 162 (291)
T ss_dssp CSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCC-TT----------------EEECTTSCEEETTC
T ss_pred cccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCC-ce----------------EEEccCCcEEEccC
Confidence 46666677778899999999999999988899999999876643311 11 11224568999999
Q ss_pred ccCCCceEEEEEEEeCCcc-eeeceEEEEEecCCeeccC---CCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGR-SSSQNVHISVTGAPFVRPM---GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~---~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+..|+|.|+|.+.+..+. .....+.|.|..+|.+... ....+..|+.+.|.|.+.+.|.+.+.|++++..+....
T Consensus 163 -~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~ 241 (291)
T 1qz1_A 163 -KKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEE 241 (291)
T ss_dssp -CGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC-
T ss_pred -ccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCC
Confidence 999999999999986533 3336667777666654432 23456789999999999999999999999998876553
Q ss_pred ----ceEEec-CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 158 ----RQKVFP-NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 158 ----~~~~~~-~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
+..... ...|.|.++.. +|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 242 ~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~-~~~~~~l~V~~ 290 (291)
T 1qz1_A 242 EDDEKHIFSDDSSELTIRNVDK-NDEAEYVCIAENKAGE-QDASIHLKVFA 290 (291)
T ss_dssp -CCSSEEECTTSCEEEECSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEEC
T ss_pred CCCcceEEcCCCcEEEEEecCh-hcCEEEEEEEEeCCCc-eEEEEEEEEEc
Confidence 333333 34799999997 9999999999999884 55667777653
No 98
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.93 E-value=5.3e-25 Score=167.77 Aligned_cols=183 Identities=26% Similarity=0.437 Sum_probs=131.1
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecc
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQ 82 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 82 (258)
|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..+.......+. ....+++|.|.++
T Consensus 109 p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~----------------~~~~~~~L~i~~~- 171 (304)
T 2yd9_A 109 PNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRI----------------KQLRSGALQIESS- 171 (304)
T ss_dssp CEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSE----------------EECTTSCEEECSC-
T ss_pred CeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceE----------------EeCCCeEEEEccC-
Confidence 66777777888999999999999999999999999999877543211111 1224568999999
Q ss_pred cCCCceEEEEEEEeCCcceeeceEEEEEec---CCeec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcc
Q psy14532 83 KDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRR 158 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~ 158 (258)
+..|+|.|+|.+.+..+...+....|.|.. +|.+. .+....+..|+.+.|.|.+.|.|.+.+.|++++..+.....
T Consensus 172 ~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~ 251 (304)
T 2yd9_A 172 EETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDD 251 (304)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSS
T ss_pred CcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccc
Confidence 999999999999998876653435555542 23322 34456688999999999999999999999999988765543
Q ss_pred eEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcc
Q psy14532 159 QKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKI 207 (258)
Q Consensus 159 ~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 207 (258)
. ..+.+.|.-... +|+|.|+|.|.|..|. ....+.|.|..++..
T Consensus 252 ~---~~~~~~L~i~~~-~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 252 M---PVGRNVLELTDV-KDSANYTCVAMSSLGV-IEAVAQITVKSLPKA 295 (304)
T ss_dssp C---CBSEEEEEECSC-CSCEEEEEEEEETTEE-EEEEEEEC-------
T ss_pred c---cCCcEEEEEccc-ccCEEEEEEEEeCCCc-EEEEEEEEEecCccc
Confidence 2 233433333344 6899999999999884 456777777766543
No 99
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.93 E-value=3.9e-25 Score=158.33 Aligned_cols=178 Identities=24% Similarity=0.387 Sum_probs=129.6
Q ss_pred ceeeceeeeecCCCceEEEEE-EeecCC-CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecc
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCI-ATGNPT-PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQ 82 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~-~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 82 (258)
....+.++.+.+|+++.|.|. +.+.|. +.+.|++++..+......... ....+++|.|.++
T Consensus 11 ~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~----------------~~~~~~~L~i~~v- 73 (201)
T 3s97_C 11 PPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----------------VSQTNGNLYIANV- 73 (201)
T ss_dssp CSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEE----------------ECTTTCCEEESSC-
T ss_pred CcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeE----------------EEcCCCeEEECcC-
Confidence 344557788999999999999 788888 899999988665422111111 1123578999999
Q ss_pred cCCCceEEEEEEEeCCcceee--ceEEEEEecC-------C-eeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcc
Q psy14532 83 KDHDRGVYWCTATNKQGRSSS--QNVHISVTGA-------P-FVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQ 152 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~--~~~~l~v~~~-------~-~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~ 152 (258)
+.+|+|.|+|.+.+..+.... ..+.+.+... | .........+..|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 74 ~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~ 153 (201)
T 3s97_C 74 EASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 153 (201)
T ss_dssp CGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBC
T ss_pred CcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCc
Confidence 999999999999986654431 3344444321 1 11223466788999999999999999999999999987
Q ss_pred cCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 153 LPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 153 ~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
+..... .....+.|.|.++.. +|.|.|+|.+.|..+. .+..+.|.|.
T Consensus 154 ~~~~~~-~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 200 (201)
T 3s97_C 154 MPSTAE-ISTSGAVLKIFNIQL-EDEGIYECEAENIRGK-DKHQARIYVQ 200 (201)
T ss_dssp CCTTCE-EETTTTEEEECSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEE
T ss_pred CCCcee-ecCCCCEEEEccCCh-hhCEEEEEEEEecCCc-eeeeEEEEEe
Confidence 764422 233567899999997 9999999999998873 4556666654
No 100
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.93 E-value=5.4e-25 Score=176.88 Aligned_cols=236 Identities=17% Similarity=0.290 Sum_probs=143.7
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeC--CEeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|. +....... .....+........+..|..+.. ..+|.
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (457)
T 1hzh_H 5 VQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMG--WINPYNGNKEFSAKFQDRVTFTADTSANTAYME 82 (457)
T ss_dssp EECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEE--EEETTTTEEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred ecCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEE--EEecCCCceecCccccCceEEEEeCCCCEEEEE
Confidence 445678899999999999998765 668999984 22110000 00000000001111223333322 24799
Q ss_pred EeecccCCCceEEEEEEEeCCc---------c--eeeceEEEEEec----CCeec-cCCCcceecCCcEEEEeeeCcc-c
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG---------R--SSSQNVHISVTG----APFVR-PMGNVSAIAGEPLYLGCPVAGY-P 140 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~---------~--~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~ 140 (258)
|.++ +.+|+|.|+|.+.+..+ . .......|.|.. +|.+. ......+.+|+.+.|.|.+.+. |
T Consensus 83 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 161 (457)
T 1hzh_H 83 LRSL-RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 161 (457)
T ss_dssp ECSC-CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBS
T ss_pred ECCC-CcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeC
Confidence 9999 99999999999998754 1 122455677764 33322 2233446789999999999886 6
Q ss_pred C-ceEEEEeCCcccCCCcceE-EecCC------eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee----------
Q psy14532 141 I-ESITWQKGVQQLPLNRRQK-VFPNG------TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT---------- 202 (258)
Q Consensus 141 ~-~~i~W~~~~~~~~~~~~~~-~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~---------- 202 (258)
. +.+.|++++..+....... ...++ .|.|.++.. +| |.|+|.|.|..+. ......+.+.
T Consensus 162 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d-G~Y~C~a~n~~~~-~~~~~~v~~~~~~~~~~~~~ 238 (457)
T 1hzh_H 162 EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPSN-TKVDKKAEPKSCDKTHTCPP 238 (457)
T ss_dssp CCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGG-GT-SCCEEEEEEGGGT-EEEEEECCCCCSCSSCSCCS
T ss_pred CCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEeccccc-CC-ceEEEEEEeCCCC-cceeEEecccCCCcccccCC
Confidence 4 7999999886543211111 11222 588888886 78 9999999997542 1122222221
Q ss_pred -------cCCcccc-CCCCC-ccCCCCeeeEEEEeccCC-CC---ceeEEEECCEecccc
Q psy14532 203 -------VPPKIAP-FEFQP-DLHSGDRAGVQCLVTKGD-PP---LTISWLKNGLPILSA 249 (258)
Q Consensus 203 -------~~p~~~~-~~~~~-~~~~g~~~~l~C~~~~~~-p~---~~~~W~~~g~~l~~~ 249 (258)
.+|.+.. .+... .+.+|+.+.|.|.+. +. |. +.|.|+++|+.+...
T Consensus 239 ~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~-g~~p~p~~~~i~W~k~~~~~~~~ 297 (457)
T 1hzh_H 239 CPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVV-DVSHEDPEVKFNWYVDGVEVHNA 297 (457)
T ss_dssp CCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEE-CCCTTCCCCEEEEEETTEEECCC
T ss_pred CCCccccCCceEEeECcCchhhcccCCceEEEEEEE-cccCCCCceEEEEEeCCcccccc
Confidence 1222211 11111 267899999999995 65 43 399999999887643
No 101
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.93 E-value=2.5e-25 Score=160.89 Aligned_cols=195 Identities=18% Similarity=0.234 Sum_probs=130.0
Q ss_pred ceeeceeeeecCCCceEEEEEEeecC----CCeEEEeeCCEeCcCCccccceec-ccceee--ccccccceeee------
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNP----TPHISWKLDGYPLAGDRHENKNRI-GEARVQ--QLPLNRRQKVF------ 71 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~------ 71 (258)
|...+..+.+.+|++++|.|.+.+.+ .+.+.|++.+........ ..... +..... ...+..+..+.
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 81 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQ-VIILYSGDKIYDNYYPDLKGRVHFTSNDVKS 81 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSE-EEEEEETTEEECCCCGGGTTTEEESCSCGGG
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCce-EEEEEeCCeEccccCCccccceEEeccCccC
Confidence 44556778899999999999998765 469999984321100000 00000 000000 11122222222
Q ss_pred eCCcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeee-CcccCceEEEEeC
Q psy14532 72 PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPV-AGYPIESITWQKG 149 (258)
Q Consensus 72 ~~~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~ 149 (258)
.+++|.|.++ +.+|+|.|+|.+.+..+... ..+.|.|..+|.... .....+..|+.+.|.|.+ .+.|.+.+.|+++
T Consensus 82 ~~~~L~i~~v-~~~D~G~Y~C~~~~~~~~~~-~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 159 (214)
T 3jz7_A 82 GDASINVTNL-QLSDIGTYQCKVKKAPGVAN-KKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKL 159 (214)
T ss_dssp TBCCEEECSC-CGGGCEEEEEEEEETTEEEE-EEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEEC
T ss_pred CcccEEEccC-ChhhCeEEEEEEEeCCCccc-cEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEEC
Confidence 3578999999 99999999999999877665 788899987765432 223347789999999999 7899999999996
Q ss_pred CcccCCCc-ceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecC
Q psy14532 150 VQQLPLNR-RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVP 204 (258)
Q Consensus 150 ~~~~~~~~-~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~ 204 (258)
+....... ......++.|.|.++.. +|+|.|+|.|.|..+. .+..+.|.|..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~~P 213 (214)
T 3jz7_A 160 SDSQTMPTPWLAEMTSPVISVKNASS-EYSGTYSCTVQNRVGS-DQCMLRLDVVPP 213 (214)
T ss_dssp STTCCCCGGGGGGTTSSEEEECSCCG-GGCEEEEEEEECSSCE-EEEEEEECCBCC
T ss_pred CCCCccCccceeccCCCEEEEecCCH-HHCEEEEEEEEcCCCc-EEEEEEEEEeCC
Confidence 54332221 12223456899999997 9999999999999884 456677777643
No 102
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.93 E-value=4.7e-25 Score=176.57 Aligned_cols=238 Identities=18% Similarity=0.261 Sum_probs=144.9
Q ss_pred eeeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcE
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTL 76 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l 76 (258)
...+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+.... .....+........+..|..+.. +++|
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 81 (444)
T 1igt_B 4 LQESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVA--YISNGGGSTYYPDTVKGRFTISRDNAKNTLYL 81 (444)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEE--EECTTSSCEECCGGGTTTEEEEEETTTTEEEE
T ss_pred EecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEE--EEecCCCceecCcccCCceEEEEeCCCCeEEE
Confidence 3456678899999999999998753 5689999852 2110000 00000000000111222333322 3579
Q ss_pred EEeecccCCCceEEEEEEEeCCcc--eeeceEEEEEec----CCeec-cCCCcceecCCcEEEEeeeCcc-cCc-eEEEE
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGR--SSSQNVHISVTG----APFVR-PMGNVSAIAGEPLYLGCPVAGY-PIE-SITWQ 147 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W~ 147 (258)
.|.++ +.+|+|.|+|.+.+..+. .....+.|.|.. +|.+. ......+.+|+.+.|.|.+.+. |.+ .+.|+
T Consensus 82 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 160 (444)
T 1igt_B 82 QMSRL-KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWN 160 (444)
T ss_dssp EECSC-CGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEG
T ss_pred EECCC-CHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEe
Confidence 99999 999999999999987543 222456777763 23222 2223345789999999999884 766 99999
Q ss_pred eCCcccCCC--cce----EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe------------------ec
Q psy14532 148 KGVQQLPLN--RRQ----KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV------------------TV 203 (258)
Q Consensus 148 ~~~~~~~~~--~~~----~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v------------------~~ 203 (258)
+++..+... ... .....+.|.|.++.. +| |.|+|.|.|..+.. .....+.+ ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d-g~Y~C~a~n~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (444)
T 1igt_B 161 SGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTW-PS-QSITCNVAHPASST-KVDKKIEPRGPTIKPCPPCKCPAPNLLG 237 (444)
T ss_dssp GGTBCTTEEECCCEEETTEEEEEEEEEECSTTT-TT-SCCEEEEEETTTTE-EEEEECCCCCCSCCCCCCCSCCCSCCCC
T ss_pred cCCCCCCeEecCccccCCcEEEEEEEEEchhhc-CC-CeEEEEEEeCCCCc-ceEEEeccCCCCcccCCccccCCcccCC
Confidence 987753211 000 111224577878876 78 99999999987642 11222211 11
Q ss_pred CCccccCCCCCc--cCCCCeeeEEEEeccCC--C-CceeEEEECCEecccc
Q psy14532 204 PPKIAPFEFQPD--LHSGDRAGVQCLVTKGD--P-PLTISWLKNGLPILSA 249 (258)
Q Consensus 204 ~p~~~~~~~~~~--~~~g~~~~l~C~~~~~~--p-~~~~~W~~~g~~l~~~ 249 (258)
+|.+...+.... +..|+.++|.|.+.+.. | .+.|.|+++|..+...
T Consensus 238 ~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~ 288 (444)
T 1igt_B 238 GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTA 288 (444)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSST
T ss_pred CceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCc
Confidence 333322222222 58899999999996332 3 4799999999988643
No 103
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.93 E-value=1.7e-25 Score=161.25 Aligned_cols=191 Identities=23% Similarity=0.341 Sum_probs=135.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
++.+...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+....... .. ....+..+... ..++|.|.++
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~------~~-~~~~~~~r~~~-~~~~L~i~~~ 75 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYN------NK-ITASYEDRVTF-LPTGITFKSV 75 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEET------TE-ECTTTTTTCEE-ETTEEECSCC
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEec------Cc-cCccccCceEe-eccEEEEeeC
Confidence 4556777888899999999999999988888999999764421110000 00 00111122222 2478999999
Q ss_pred ccCCCceEEEEEEEeCCcc-eeeceEEEEEecCCeecc-CCCcceecCCcEEEEeee-CcccCceEEEEeCCcccCCCcc
Q psy14532 82 QKDHDRGVYWCTATNKQGR-SSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQLPLNRR 158 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~~~~~~ 158 (258)
+..|+|.|+|.+.+..+. .....+.|.|..+|.... .....+..|+.+.|.|.+ .+.|.+.+.|++++..+.....
T Consensus 76 -~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~ 154 (209)
T 1nbq_A 76 -TREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPK 154 (209)
T ss_dssp -CTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSS
T ss_pred -CHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccc
Confidence 999999999999997652 233677888877765433 334568899999999997 8899999999999887764332
Q ss_pred ---------eEE-ecCCeEEEEecccCCCCcEEEEEEEeCCCCC-ccceEEEEee
Q psy14532 159 ---------QKV-FPNGTLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHISVT 202 (258)
Q Consensus 159 ---------~~~-~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~ 202 (258)
+.+ ...+.|.|.++.. +|.|.|+|.|.|..+.. .+..+.|.|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 155 STRAFSNSSYVLNPTTGELVFDPLSA-SDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp SSSSCTTCCCCCCTTTCCEEESSCCG-GGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred cceeeeccceEEcCCcceEEEEeccc-cCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 111 1456899999997 99999999999998865 3555555543
No 104
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.93 E-value=6.1e-25 Score=157.42 Aligned_cols=179 Identities=23% Similarity=0.285 Sum_probs=123.3
Q ss_pred ceeeceeeee-cCCCceEEEEEEeecCCCeEEEeeCC-EeCcCCccccceecccceeeccccccceeeeeCCcEEEeecc
Q psy14532 5 LIYKFIQQTL-QPGPPVSLKCIATGNPTPHISWKLDG-YPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQ 82 (258)
Q Consensus 5 ~~~~~~~~~~-~~g~~v~l~C~~~~~~~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 82 (258)
+...|.+..+ .+|++++|.|.+.|.|.+.+.|++.. ..+.. ... ....+++|.|.++
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~-----~~~---------------~~~~~~~L~I~~v- 61 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNG-----KVT---------------NEGTTSTLTMNPV- 61 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSS-----EEE---------------EETTEEEEEESSC-
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccc-----eEE---------------EcCCccEEEECcC-
Confidence 4455555444 59999999999999888999999842 21110 000 0012346999999
Q ss_pred cCCCceEEEEEEEeCCcceeeceEEEEEecCCeec-cCCCcceecCCcEEEEeeeCcc-cC--ceEEEEeCCcccCCCcc
Q psy14532 83 KDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGY-PI--ESITWQKGVQQLPLNRR 158 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~--~~i~W~~~~~~~~~~~~ 158 (258)
+.+|+|.|+|.+.+..+... ..+.|.|..+|... ......+.+|+.++|.|.+.+. |. +.+.|++++..+.....
T Consensus 62 ~~~D~G~Y~C~a~n~~~~~~-~~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~ 140 (202)
T 1vca_A 62 SFGNEHSYLCTATCESRKLE-KGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEF 140 (202)
T ss_dssp CGGGCSEEEEEEEETTEEEE-EEEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEEC
T ss_pred CHHHCEEEEEEEEECCceEe-eEEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECccccc
Confidence 99999999999999877655 78889998665321 1222568899999999999875 33 37999999876643211
Q ss_pred eE-------EecCCeEEEEecccCCCCcEEEEEEEeCCCCC------ccceEEEEeecCCc
Q psy14532 159 QK-------VFPNGTLLIENVQKDHDRGVYWCTATNKQGRS------SSQNVHISVTVPPK 206 (258)
Q Consensus 159 ~~-------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~------~~~~~~l~v~~~p~ 206 (258)
.. ......|.|..... +|+|.|+|.|.|..+.. .+..+.|.|.++|.
T Consensus 141 ~~~~~~~~~~~~~~~l~i~~~~~-d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 141 LEDADRKSLETKSLEVTFTPVIE-DIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CSCCSSCCCEEEEEEEEECCCGG-GTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred ccccCcCcceEEEEEEEEEeeec-cCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 00 11123356666664 88999999999987642 34577888888875
No 105
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.93 E-value=3.2e-26 Score=182.85 Aligned_cols=230 Identities=11% Similarity=0.175 Sum_probs=146.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeec-CCC-eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGN-PTP-HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.+........+.+|+.++|.|.+.+. |.+ .|.|++++..+.... .... .. . ......+.|.|.
T Consensus 119 ~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~-~~~~-~~---------~--~~~~~~s~L~i~ 185 (434)
T 1igy_B 119 PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT-FPAV-LQ---------S--DLYTLSSSVTVP 185 (434)
T ss_dssp CCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEE-CCCE-EC---------S--SCEEEEEEEEEE
T ss_pred CCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEe-cCce-ec---------C--CcEEEEEEEEEc
Confidence 3555433333446799999999999886 766 999999876432110 0000 00 0 011123468898
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEec-------------CCeeccCCCcc--eecCCcEEEEeeeCccc----
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG-------------APFVRPMGNVS--AIAGEPLYLGCPVAGYP---- 140 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-------------~~~~~~~~~~~--~~~g~~~~l~C~~~~~~---- 140 (258)
++ +.+| |.|+|.+.+..+... ....+.+.. +.....++... +.+|+.+.|.|.+.+.+
T Consensus 186 ~~-~~~d-g~Y~C~a~n~~~~~~-~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~ 262 (434)
T 1igy_B 186 SS-PRPS-ETVTCNVAHPASSTK-VDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDP 262 (434)
T ss_dssp TT-TTTS-SCCEEEEECTTTTCC-EEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCC
T ss_pred ch-hcCC-CcEEEEEEeCCCCcc-ceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCC
Confidence 88 8788 999999999877643 222332210 11111122222 78899999999998873
Q ss_pred CceEEEEeCCcccCCCcce--------EEecCCeEEEEecccCCCCcEEEEEEEeCCCCC-ccceEEE--EeecCCcccc
Q psy14532 141 IESITWQKGVQQLPLNRRQ--------KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHI--SVTVPPKIAP 209 (258)
Q Consensus 141 ~~~i~W~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l--~v~~~p~~~~ 209 (258)
.+.+.|++++..+...... .....+.|.|.++.. +|.|.|+|.|.|..+.. ....+.+ .+..+|.+..
T Consensus 263 ~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~ 341 (434)
T 1igy_B 263 EVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDW-LNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYT 341 (434)
T ss_dssp CCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHH-HHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEE
T ss_pred CeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHc-cCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEE
Confidence 3589999998766432110 011234689999987 89999999999987643 2223332 3455676655
Q ss_pred CCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEeccc
Q psy14532 210 FEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILS 248 (258)
Q Consensus 210 ~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~ 248 (258)
.+.......|+.++|.|.+.+.+|+ +.|.|++||+.+..
T Consensus 342 ~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 381 (434)
T 1igy_B 342 IPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPEN 381 (434)
T ss_dssp ECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSC
T ss_pred ECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCC
Confidence 5444334567889999999544554 58999999998854
No 106
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.93 E-value=5.6e-26 Score=193.52 Aligned_cols=219 Identities=25% Similarity=0.349 Sum_probs=61.3
Q ss_pred eeeecCCCceEEEEEEeec--CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCce
Q psy14532 11 QQTLQPGPPVSLKCIATGN--PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRG 88 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G 88 (258)
...+.+|++++|.|.+.+. +...+.|++++..+............ ..........++|.|.++ +.+|+|
T Consensus 233 ~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~L~i~~v-~~~d~G 303 (772)
T 3v2a_R 233 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKT--------QSGSEMKKFLSTLTIDGV-TRSDQG 303 (772)
T ss_dssp CEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-------------CCCEEEEEEEEESSC-CSTTCS
T ss_pred ceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccc--------cccccceEEEEEEEECcC-CcCCCe
Confidence 3678999999999999874 45689999988765432110000000 000011123457999999 999999
Q ss_pred EEEEEEEeCCcceeeceEEEEEecCCeecc----CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecC
Q psy14532 89 VYWCTATNKQGRSSSQNVHISVTGAPFVRP----MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPN 164 (258)
Q Consensus 89 ~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~----~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~ 164 (258)
.|+|.+.+..+... ..+.|.|..+|.+.. .....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .+...
T Consensus 304 ~Y~C~~~~~~~~~~-~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~--~~~~~ 380 (772)
T 3v2a_R 304 LYTCAASSGLMTKK-NSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNH--TIKAG 380 (772)
T ss_dssp EEEEEEECSSCEEE-EEEEEEEECCCC-----------------------------------------------------
T ss_pred EEEEEEEcCCccee-EEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCc--eEccc
Confidence 99999999877655 788889988775443 234567889999999999999999999999998776532 22345
Q ss_pred CeEEEEecccCCCCcEEEEEEEeCCCCC-ccceEEEEeecCCccccCCC---CCccCCCCeeeEEEEeccCCCCce-eEE
Q psy14532 165 GTLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHISVTVPPKIAPFEF---QPDLHSGDRAGVQCLVTKGDPPLT-ISW 239 (258)
Q Consensus 165 ~~l~i~~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~---~~~~~~g~~~~l~C~~~~~~p~~~-~~W 239 (258)
..|.|.++.. +|+|.|+|.+.|..+.. .+..+.|.|..+|.+..... ...+..|+.++|.|.+ .+.|.+. +.|
T Consensus 381 ~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W 458 (772)
T 3v2a_R 381 HVLTIMEVSE-RDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTV-YAIPPPHHIHW 458 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEEecCCh-hcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEe-ccCCCCcEEEE
Confidence 7899999997 99999999999987643 24567778888887643311 1237889999999999 6888886 999
Q ss_pred EECC
Q psy14532 240 LKNG 243 (258)
Q Consensus 240 ~~~g 243 (258)
++++
T Consensus 459 ~~~~ 462 (772)
T 3v2a_R 459 YWQL 462 (772)
T ss_dssp ----
T ss_pred EEcC
Confidence 9974
No 107
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.92 E-value=1.2e-25 Score=174.41 Aligned_cols=179 Identities=21% Similarity=0.259 Sum_probs=139.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.+...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+..... . .....+++|.|.++
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~--~----------------~~~~~~~~L~i~~v 219 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM--K----------------SGGLPSLGLTLANV 219 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC--C----------------CCCSSEEEEEEESC
T ss_pred CCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc--c----------------ceecccceEEEeeC
Confidence 68888888999999999999999999999999999998765432210 0 01123568999999
Q ss_pred ccCCCce-EEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceE
Q psy14532 82 QKDHDRG-VYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQK 160 (258)
Q Consensus 82 ~~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~ 160 (258)
+..|+| .|+|.+.+..+... ..+.|.|..+|.+ .......|+.+.|.|.+.|.|.|.+.|++++..+.......
T Consensus 220 -~~~D~G~~Y~C~a~n~~g~~~-~~~~l~V~~~P~i---~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~ 294 (347)
T 2ifg_A 220 -TSDLNRKNVTCWAENDVGRAE-VSVQVNVSFPASV---QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIF 294 (347)
T ss_dssp -CSTTTTCCEEECCEETTEECC-EEECCCCBEEEEE---EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEE
T ss_pred -ChHHCCCeEEEEEEcCCCCEE-EEEEEEEcCCCee---eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCccee
Confidence 999999 99999999887665 6777777666654 12235678999999999999999999999998877543322
Q ss_pred E----------ecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 161 V----------FPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 161 ~----------~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
. ...++|.|.++.. +|+|.|+|.|.|..| ..+..+.|.|..+|
T Consensus 295 ~~~~~~~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~N~~G-~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 295 TEFLEPAANETVRHGCLRLNQPTH-VNNGNYTLLAANPFG-QASASIMAAFMDNP 347 (347)
T ss_dssp EEECCCCTTCCCEEEEEEESSCCG-GGCEEEEEEEEETTE-EEEEEEEECSCCCC
T ss_pred eEEEeecCCCcccceEEEECCCCc-ccCceEEEEEecCCC-ceeeEEEEEecCCC
Confidence 2 1245699999997 999999999999988 45566777776654
No 108
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.92 E-value=4.4e-24 Score=158.05 Aligned_cols=191 Identities=21% Similarity=0.338 Sum_probs=126.7
Q ss_pred ceeeceeeeecCCCceEEEEEEee---cCCCeEEEeeCCEeCcCCcccc-cee----------cccceeeccccccceee
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATG---NPTPHISWKLDGYPLAGDRHEN-KNR----------IGEARVQQLPLNRRQKV 70 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~---~~~~~v~W~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~ 70 (258)
+...+.++.+.+|++++|.|.+.+ .+.+.+.|+|++.......... ... ..........+..|..+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 344556788999999999999987 6788999999864321000000 000 00000001112222222
Q ss_pred ee--CCcEEEeecccCCCceEEEEEEEeCCccee----eceEEEEEecC---Ceec--cCCCcceecCCcEEEEeeeCcc
Q psy14532 71 FP--NGTLLIENVQKDHDRGVYWCTATNKQGRSS----SQNVHISVTGA---PFVR--PMGNVSAIAGEPLYLGCPVAGY 139 (258)
Q Consensus 71 ~~--~~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~----~~~~~l~v~~~---~~~~--~~~~~~~~~g~~~~l~C~~~~~ 139 (258)
.. +.+|.|.++ +.+|+|.|+|.+.+..+... ...+.|.|..+ +.+. ......+.+|+.+.|.|.+.+.
T Consensus 85 ~~~~~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~ 163 (250)
T 2fbo_J 85 ANLAAPTLRLTHV-HPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDC 163 (250)
T ss_dssp SCTTSCCEEECSC-CGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESC
T ss_pred ccCCcceEEEeeC-ChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCC
Confidence 22 468999999 99999999999998765431 25778888764 2222 2334566779999999999998
Q ss_pred cCceEEEEeCCcccCCCc------------------------ceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccc
Q psy14532 140 PIESITWQKGVQQLPLNR------------------------RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQ 195 (258)
Q Consensus 140 ~~~~i~W~~~~~~~~~~~------------------------~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~ 195 (258)
|.|.+.|++++..+.... .........|.|.++.. +|+|.|+|.|.|..+...+.
T Consensus 164 p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~~g~~ 242 (250)
T 2fbo_J 164 ANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKI-TDAGRVWCELATGQGELDAD 242 (250)
T ss_dssp TTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCG-GGCEEEEEEEESSSSGGGEE
T ss_pred CCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCc-ccCEEEEEEecCCccccCcc
Confidence 888999999987664321 11122446899999997 99999999999977644433
Q ss_pred eE
Q psy14532 196 NV 197 (258)
Q Consensus 196 ~~ 197 (258)
..
T Consensus 243 ~~ 244 (250)
T 2fbo_J 243 RS 244 (250)
T ss_dssp EE
T ss_pred ce
Confidence 33
No 109
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.92 E-value=1.3e-24 Score=155.82 Aligned_cols=181 Identities=15% Similarity=0.181 Sum_probs=121.4
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCC-----CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPT-----PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~-----~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+...+..+.+.+|++++|.|.+.+.+. +.+.|+|.+....... .+..+... .....+.+|.|.
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~--~r~~~~~~----------~~~~~~~~L~I~ 72 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQS--ERATLLEE----------QLPLGKALFHIP 72 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBC--SSCEECGG----------GGGGTEEEEEEC
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccC--CceEEeec----------cccCCeeEEEEC
Confidence 344556788999999999999988765 7899999433322211 11111100 000123579999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcce
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~ 159 (258)
++ +.+|+|.|+|.+.+..+... ..+.|.|..++.........+..|+.+.|.|.+.|.|.+.+.|++++..+.. ..
T Consensus 73 ~v-~~~D~G~Y~C~~~~~~~~~~-~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~ 148 (202)
T 3bp6_B 73 SV-QVRDSGQYRCLVICGAAWDY-KYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SH 148 (202)
T ss_dssp SC-CGGGCEEEEEEEEETTEEEE-EEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EE
T ss_pred CC-CHHHCcEEEEEEEeCCCcce-EEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ce
Confidence 99 99999999999999887665 7888888865422111112345799999999999999999999998775532 22
Q ss_pred EEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 160 KVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 160 ~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
....++ .+.+.++.. +|.|.|+|.|.|..+. ....+.|.|..
T Consensus 149 ~~~~~~~~~~~~i~~v~~-~d~G~Y~C~a~N~~g~-~~~~~~l~v~~ 193 (202)
T 3bp6_B 149 IRTPEGLYQVTSVLRLKP-QPSRNFSCMFWNAHMK-ELTSAIIDPLS 193 (202)
T ss_dssp EECTTSCEEEEEEEEECC-CTTCCEEEEEEETTTT-EEEEEEECC--
T ss_pred eeCCCCCEEEEEEEEEEc-CCCCEEEEEEEcCCcc-cccEEEEEecC
Confidence 222333 345667776 8999999999999874 44555555543
No 110
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=155.82 Aligned_cols=168 Identities=20% Similarity=0.279 Sum_probs=122.1
Q ss_pred CCCceEEEEEEeec-CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEEEEEE
Q psy14532 16 PGPPVSLKCIATGN-PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTA 94 (258)
Q Consensus 16 ~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~~ 94 (258)
.++.+.|.|.+.+. |.+.+.|+|++..+... .++.+. ......+|.|.++ +.+|+|.|+|.+
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~---~~~~~~-------------~~~~~~~L~i~~v-~~~D~G~Y~C~~ 78 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS---DRVKTG-------------VTGEQIWLQINEP-TPNDKGKYVMEL 78 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCC---SSEEEE-------------EETTEEEEEEESC-CGGGCEEEEEEE
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCC---CeEEEE-------------EeCCEEEEEECCC-CcccCEEEEEEE
Confidence 56666777776664 57899999999887654 222111 0001235999999 999999999999
Q ss_pred EeCCcceeeceEEEEEec---------------------CCeec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcc
Q psy14532 95 TNKQGRSSSQNVHISVTG---------------------APFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQ 152 (258)
Q Consensus 95 ~~~~~~~~~~~~~l~v~~---------------------~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~ 152 (258)
.+..+... ..+.|.+.. ++... .+....+..|+.+.|.|.+.+.|.+.+.|++++..
T Consensus 79 ~n~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~ 157 (212)
T 2r15_A 79 FDGKTGHQ-KTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKA 157 (212)
T ss_dssp ECSSCEEE-EEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEE
T ss_pred ecCCcceE-EEEEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeE
Confidence 99776655 555565432 22222 23346788999999999999999999999999988
Q ss_pred cCCCcceEEecC----CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 153 LPLNRRQKVFPN----GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 153 ~~~~~~~~~~~~----~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
+....+..+... ..|.|.++.. +|.|.|+|.|.|..+. .+..+.|.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~~ 210 (212)
T 2r15_A 158 LAQTDHCNLKFEAGRTAYFTINGVST-ADSGKYGLVVKNKYGS-ETSDFTVSVFI 210 (212)
T ss_dssp ECCCSSEEEEEETTTEEEEEESSCCG-GGCEEEEEEEEETTEE-EEEEEEEEEEC
T ss_pred CccCCCEEEEEcCCCEEEEEEcCcch-HHCeEEEEEEEcCCCc-EEEEEEEEEEc
Confidence 876665554332 2799999997 9999999999999874 45666777664
No 111
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.92 E-value=5.1e-24 Score=156.55 Aligned_cols=181 Identities=17% Similarity=0.175 Sum_probs=128.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.. .+.+|++|+|.|.+.+ +...+.|+|++..+..... .. .....+++|.|.++
T Consensus 7 kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~--~~---------------~~~~~~~~L~I~~v 67 (242)
T 1p6f_A 7 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP--KP---------------PERINKVKFYIPDM 67 (242)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC--SS---------------CTTCCEEEEEECSC
T ss_pred CCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc--cc---------------cCCcceeEEEecCC
Confidence 6778777776 7899999999999864 3568999999876532100 00 00112457999999
Q ss_pred ccCCCceEEEEEEEeCCcc-eeeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc
Q psy14532 82 QKDHDRGVYWCTATNKQGR-SSSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~ 157 (258)
+.+|+|.|+|.+.+..+. ..+..+.|.|.. .|.+...+...+.+|+.++|.|.+.+. .+.+.|++++..+...
T Consensus 68 -~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~- 144 (242)
T 1p6f_A 68 -NSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ- 144 (242)
T ss_dssp -CGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE-
T ss_pred -CcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc-
Confidence 999999999999875432 223667788864 344443334568899999999998764 4589999998876531
Q ss_pred ceEEecCCeEEEEecccCCCCcEEEEEEEeCC--CCCccceEEEEeecCC
Q psy14532 158 RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQ--GRSSSQNVHISVTVPP 205 (258)
Q Consensus 158 ~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~--~~~~~~~~~l~v~~~p 205 (258)
.......+.|.|.+++. +|+|.|+|.+.+.. ....+..+.|.|...+
T Consensus 145 ~~~~~~~~~l~I~~v~~-~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 145 RGYGKVQAEFPLGPVTT-AHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp EEECSSEEEEEEEECCG-GGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred ccCCCceEEEEeCCCcc-ccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 11122446799999998 99999999999864 2345778888887644
No 112
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.92 E-value=5.5e-24 Score=153.85 Aligned_cols=177 Identities=17% Similarity=0.183 Sum_probs=121.7
Q ss_pred eceeeeecCC--CceEEEEEEeecCCCeEEEeeC---CEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecc
Q psy14532 8 KFIQQTLQPG--PPVSLKCIATGNPTPHISWKLD---GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQ 82 (258)
Q Consensus 8 ~~~~~~~~~g--~~v~l~C~~~~~~~~~v~W~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 82 (258)
.+..+.+.+| ++++|.|.+.+ |.+.+.|++. +..+... ... .....+.|.|.++
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~---~~~----------------~~~~~~~l~I~~v- 71 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG---NRI----------------SWDSKKGFTIPSY- 71 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCS---SSC----------------EEETTTEEEEEGG-
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCC---Ccc----------------cccCCccEEEccC-
Confidence 4578889999 99999999976 6689999884 5554432 111 1123457999999
Q ss_pred cCCCceEEEEEEEeCCcceeeceEEEEEecC--Cee--ccCCCcceecCCcEEEEeeeCccc--CceEEEEeCCcccCCC
Q psy14532 83 KDHDRGVYWCTATNKQGRSSSQNVHISVTGA--PFV--RPMGNVSAIAGEPLYLGCPVAGYP--IESITWQKGVQQLPLN 156 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~--~~~--~~~~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~~~~~~~ 156 (258)
+.+|+|.|+|.+.+..+...+..+.|.|... +.+ .+.....+.+|+.+.|.|.+.+.| .+.+.|++++..+...
T Consensus 72 ~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~ 151 (213)
T 2x1w_L 72 MISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHK 151 (213)
T ss_dssp GTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSE
T ss_pred ChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceE
Confidence 9999999999999855444434577777542 212 223334788999999999998754 4589999988765432
Q ss_pred cc-e-E---------EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcc
Q psy14532 157 RR-Q-K---------VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKI 207 (258)
Q Consensus 157 ~~-~-~---------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 207 (258)
.. . . ....++|.|.++.. +|+|.|+|.|.|..+. .+..+.|.|..+|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~g~-~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 152 KLVNRDLKTQSGSEMKKFLSTLTIDGVTR-SDQGLYTCAASSGLMT-KKNSTFVRVHEDPIE 211 (213)
T ss_dssp EEEEEEECCCSSCSCEEEEEEEEESSCCG-GGCEEEEEEEECSSCE-EEEEEEEEEEC----
T ss_pred EEeccccccccCccceeeeEEEEECCCCc-ccCEEEEEEEecCCCc-EEEEEEEEEeccccc
Confidence 11 0 0 11234699999998 9999999999999874 567888888887754
No 113
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.92 E-value=2.3e-24 Score=173.19 Aligned_cols=231 Identities=15% Similarity=0.202 Sum_probs=139.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeec-CC-CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGN-PT-PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.+...+....+.+|++++|.|.+.+. |. +.|.|++++..+.... ....... . ........|.|.
T Consensus 132 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~-~~~~~~~---------~--~~~~~~s~L~i~ 199 (457)
T 1hzh_H 132 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHT-FPAVLQS---------S--GLYSLSSVVTVP 199 (457)
T ss_dssp CCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEE-EEEEECT---------T--SCEEEEEEEEEC
T ss_pred CCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceE-cCceECC---------C--CCEEEEEEEEec
Confidence 3555444444557899999999999886 64 7999999986542110 0000000 0 001122468899
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEec-----------------CCee-ccCCC-c-ceecCCcEEEEeeeCcc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG-----------------APFV-RPMGN-V-SAIAGEPLYLGCPVAGY 139 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-----------------~~~~-~~~~~-~-~~~~g~~~~l~C~~~~~ 139 (258)
++ ..+| |.|+|.+.+..+... ....+.+.. .|.+ ...+. . .+..|+.+.|.|.+.+.
T Consensus 200 ~~-~~~d-G~Y~C~a~n~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~ 276 (457)
T 1hzh_H 200 SS-SLGT-QTYICNVNHKPSNTK-VDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDV 276 (457)
T ss_dssp SG-GGGT-SCCEEEEEEGGGTEE-EEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECC
T ss_pred cc-ccCC-ceEEEEEEeCCCCcc-eeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcc
Confidence 99 8888 999999999766543 223332211 2222 11112 1 25679999999999887
Q ss_pred cCc----eEEEEeCCcccCCCcc--eEEecCCeEEEEec---cc--CCCCcEEEEEEEeCCCCCccceEEEE----eecC
Q psy14532 140 PIE----SITWQKGVQQLPLNRR--QKVFPNGTLLIENV---QK--DHDRGVYWCTATNKQGRSSSQNVHIS----VTVP 204 (258)
Q Consensus 140 ~~~----~i~W~~~~~~~~~~~~--~~~~~~~~l~i~~~---~~--~~~~g~y~C~~~~~~~~~~~~~~~l~----v~~~ 204 (258)
+++ .++|++++..+..... .....++.+.+... .. .+|+|.|+|.|.|..+.. .....+. +..+
T Consensus 277 ~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~-~~~~~v~~~~~~~~~ 355 (457)
T 1hzh_H 277 SHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA-PIEKTISKAKGQPRE 355 (457)
T ss_dssp CTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSS-CEEEEECCCCCCCBC
T ss_pred cCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCC-cceEEEEcccCCCCC
Confidence 543 9999999987653321 12234556655532 23 134999999999865422 1222232 3456
Q ss_pred CccccCCCCC-ccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 205 PKIAPFEFQP-DLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 205 p~~~~~~~~~-~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
|.+...+... .+..|+ +.|.|.+.+.+|+ +.|.|++||..+...
T Consensus 356 P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 401 (457)
T 1hzh_H 356 PQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNY 401 (457)
T ss_dssp CEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCE
T ss_pred CeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcce
Confidence 6555443332 344455 9999999544444 599999999999654
No 114
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.92 E-value=1.6e-23 Score=150.01 Aligned_cols=178 Identities=16% Similarity=0.210 Sum_probs=120.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+. ..+.+|++|+|.|.+.+ +.+.+.|+|++..+......... .....++.|.|.++
T Consensus 8 ~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~---------------~~~~~~~~l~I~~v 70 (201)
T 1nkr_A 8 KPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEH---------------HDGVSKANFSISRM 70 (201)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEE---------------ETTEEEEEEEESSC
T ss_pred CCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeec---------------CCCCceEEEEeccC
Confidence 577777665 67889999999999874 67799999988654321000000 00123467999999
Q ss_pred ccCCCceEEEEEEEeCCc----ceeeceEEEEEecC---CeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC
Q psy14532 82 QKDHDRGVYWCTATNKQG----RSSSQNVHISVTGA---PFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP 154 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~ 154 (258)
+.+|+|.|+|.+.+... ...+..+.|.|... |.+...+...+.+|+.++|.|.+.+ +.+.+.|++++..+.
T Consensus 71 -~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~ 148 (201)
T 1nkr_A 71 -TQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRS-SYDMYHLSREGEAHE 148 (201)
T ss_dssp -CGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESS-CCSEEEEEETTCSSC
T ss_pred -CcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCC-CCceEEEEECCcccC
Confidence 99999999999986431 22235677777643 3443333346889999999999986 567899999998765
Q ss_pred CCcceEEe----cCCeEEEEecccCCCCcEEEEEEEeCC----CCCccceEEEEe
Q psy14532 155 LNRRQKVF----PNGTLLIENVQKDHDRGVYWCTATNKQ----GRSSSQNVHISV 201 (258)
Q Consensus 155 ~~~~~~~~----~~~~l~i~~~~~~~~~g~y~C~~~~~~----~~~~~~~~~l~v 201 (258)
........ ..+.|.|.+++ |+|.|+|.+.+.. ....+..+.|.|
T Consensus 149 ~~~~~~~~~~~~~~~~L~i~~v~---d~G~Y~C~a~~~~~~~~~s~~S~~~~l~V 200 (201)
T 1nkr_A 149 RRLPAGPKVNGTFQADFPLGPAT---HGGTYRCFGSFHDSPYEWSKSSDPLLVSV 200 (201)
T ss_dssp EEEECEEEETTEEEEEEEEEECC---SCEEEEEEEEETTEEEEECCCCCCEEEEE
T ss_pred cccccccccCCceEEEEEeCCcC---CCeeEEEEEEcCCCCCcCCCCCCCEEEEe
Confidence 43211111 14578998885 9999999998653 123345555554
No 115
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.92 E-value=1.7e-23 Score=161.21 Aligned_cols=178 Identities=19% Similarity=0.232 Sum_probs=129.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecC-CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNP-TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
||.+........+.+|+++.|.|.+.+.| .+.+.|+|++..+.... .++ ...+++|.|.+
T Consensus 128 ~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~--~~~-----------------~~~~~~L~I~~ 188 (329)
T 3oq3_B 128 PPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDG--TKY-----------------SQSGQNLIIHN 188 (329)
T ss_dssp CCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSS--SSE-----------------EEETTEEEECS
T ss_pred CCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCC--ceE-----------------ecCCCEEEEee
Confidence 45555555556678899999999999988 89999999998874321 111 11257899999
Q ss_pred cccCCCceEEEEEEEeC--Cccee---eceEEEEEecCC----eeccCCCcceecCCcEEEEeeeCccc---Cc-eEEEE
Q psy14532 81 VQKDHDRGVYWCTATNK--QGRSS---SQNVHISVTGAP----FVRPMGNVSAIAGEPLYLGCPVAGYP---IE-SITWQ 147 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~--~~~~~---~~~~~l~v~~~~----~~~~~~~~~~~~g~~~~l~C~~~~~~---~~-~i~W~ 147 (258)
+ +.+|+|.|+|.+.|. .+... +..+.|.|..++ .+..+....+..|+.+.|.|.+.+.| .+ .+.|+
T Consensus 189 v-~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~ 267 (329)
T 3oq3_B 189 P-ELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWE 267 (329)
T ss_dssp C-CGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEE
T ss_pred c-ChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEE
Confidence 9 999999999999986 43322 244778887665 22244556788999999999999887 67 89999
Q ss_pred eCCccc-CCCcceEEe-------cCCeEEEEecccCCCCc-EEEEEEEeCCCCCccceEEEEe
Q psy14532 148 KGVQQL-PLNRRQKVF-------PNGTLLIENVQKDHDRG-VYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 148 ~~~~~~-~~~~~~~~~-------~~~~l~i~~~~~~~~~g-~y~C~~~~~~~~~~~~~~~l~v 201 (258)
+++..+ ......... ..+.|.|.++.. +|.| .|+|.|.|..|. ....+.|.|
T Consensus 268 ~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~~Y~C~a~N~~G~-~~~~~~l~v 328 (329)
T 3oq3_B 268 NPSGWIIGLDFGVYSILTSSGGITEATLYFENVTE-EYIGNTYTCRGHNYYFD-KTLTTTVVL 328 (329)
T ss_dssp CTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCG-GGTTCEEEEEEECSSCE-EEEEEEEEE
T ss_pred ECCeeeeccCCceeeeecccCceeEeEEEEEeccH-HHCCCcEEEEEEecCCc-eEEEEEEEe
Confidence 998874 333222111 345799999997 9999 999999999874 334444443
No 116
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.92 E-value=5.1e-24 Score=181.49 Aligned_cols=219 Identities=19% Similarity=0.261 Sum_probs=120.2
Q ss_pred eceeeeecCC--CceEEEEEEeecCCCeEEEeeC--CEeCcCCccccceecccceeeccccccceeeeeCCcEEEeeccc
Q psy14532 8 KFIQQTLQPG--PPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 8 ~~~~~~~~~g--~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
.+..+.+.+| ++++|.|.+.+ |.+.+.|+++ +..+..... .. .......|.|.++ +
T Consensus 132 ~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~--~~----------------~~~~~~~l~i~~~-~ 191 (772)
T 3v2a_R 132 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGN--RI----------------SWDSKKGFTIPSY-M 191 (772)
T ss_dssp CEEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSS--SC----------------EEETTTEEEEEGG-G
T ss_pred cceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCc--ee----------------ecCCCCCeEecCC-C
Confidence 3456778889 89999999876 6789999997 554432210 00 1122456899999 9
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEecCCe----eccCCCcceecCCcEEEEeeeCc--ccCceEEEEeCCcccCCCc
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTGAPF----VRPMGNVSAIAGEPLYLGCPVAG--YPIESITWQKGVQQLPLNR 157 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~----~~~~~~~~~~~g~~~~l~C~~~~--~~~~~i~W~~~~~~~~~~~ 157 (258)
..|.|.|+|.+.+......+..+.+.+...+. +.+.....+.+|+.+.|.|.+.+ .+.+.+.|++++..+....
T Consensus 192 ~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~ 271 (772)
T 3v2a_R 192 ISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKK 271 (772)
T ss_dssp TTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------
T ss_pred hhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCce
Confidence 99999999999976544443445555543321 22233457889999999999986 4467899999887654322
Q ss_pred ceE-----------EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCC---CCCccCCCCeee
Q psy14532 158 RQK-----------VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFE---FQPDLHSGDRAG 223 (258)
Q Consensus 158 ~~~-----------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~---~~~~~~~g~~~~ 223 (258)
... ......|.|.++.. +|+|.|+|.+.+..+ ..+..+.|.|..+|.+...+ ....+.+|+.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~~~~~~-~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~ 349 (772)
T 3v2a_R 272 LVNRDLKTQSGSEMKKFLSTLTIDGVTR-SDQGLYTCAASSGLM-TKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVR 349 (772)
T ss_dssp CEEEEC-----CCCEEEEEEEEESSCCS-TTCSEEEEEEECSSC-EEEEEEEEEEECCCC--------------------
T ss_pred eeeccccccccccceEEEEEEEECcCCc-CCCeEEEEEEEcCCc-ceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEE
Confidence 111 11234699999997 999999999998876 35677888888888665432 345688999999
Q ss_pred EEEEeccCCCCceeEEEECCEecccc
Q psy14532 224 VQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 224 l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
|.|.+ .+.|.+.+.|+++|+.+...
T Consensus 350 l~C~~-~~~p~~~v~W~~~g~~l~~~ 374 (772)
T 3v2a_R 350 IPAKY-LGYPPPEIKWYKNGIPLESN 374 (772)
T ss_dssp --------------------------
T ss_pred EEEEE-eeeCCCeEEEEECCEeCCCC
Confidence 99999 58899999999999988764
No 117
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=5.5e-25 Score=175.71 Aligned_cols=234 Identities=17% Similarity=0.278 Sum_probs=142.0
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee-----eCCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF-----PNGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~ 77 (258)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+....... ..+........+..|..+. .+.+|.
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~--~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 81 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYIN--PSSVYTNYNQRFKDKATLTRDRSSNTANIH 81 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECC--SSSCCCCCCGGGTTTEECCBCGGGCBBCEE
T ss_pred ECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEc--cCCCceecCccccccEEEEEECCCCEEEEE
Confidence 445677899999999999998753 5689999863 2110000000 0000000001112222222 235799
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEec----CCeec-cCCCcceecCCcEEEEeeeCcc-cCc-eEEEEeCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG----APFVR-PMGNVSAIAGEPLYLGCPVAGY-PIE-SITWQKGV 150 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W~~~~ 150 (258)
|.++ +.+|+|.|+|.+.+..+... ....|.|.. +|.+. ......+.+|+.+.|.|.+.+. |.+ .+.|++++
T Consensus 82 I~~v-~~~D~G~Y~C~~~~~~~~~~-~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~ 159 (434)
T 1igy_B 82 LSSL-TSDDSAVYYCVREGEVPYWG-QGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 159 (434)
T ss_dssp ECSB-CGGGCSEECCCCSSSSCCCC-CCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTT
T ss_pred ECCC-ChHHCEEEEEEEEccccccC-CceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCC
Confidence 9999 99999999999988543333 455677753 23222 1223345789999999999885 666 99999988
Q ss_pred cccCCCcc------eEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec---------C---CccccCCC
Q psy14532 151 QQLPLNRR------QKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV---------P---PKIAPFEF 212 (258)
Q Consensus 151 ~~~~~~~~------~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~---------~---p~~~~~~~ 212 (258)
........ -.....+.|.|.++.. +| |.|+|.|.|..+... ....+.+.. . |.+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d-g~Y~C~a~n~~~~~~-~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p 236 (434)
T 1igy_B 160 LSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PS-ETVTCNVAHPASSTK-VDKKIVPRDCGCKPCICTVPEVSSVFIFPP 236 (434)
T ss_dssp BCSSEEECCCEECSSCEEEEEEEEEETTTT-TS-SCCEEEEECTTTTCC-EEEECCCCCCCCCCCCCCCSSSCCEEEECC
T ss_pred cCCCeEecCceecCCcEEEEEEEEEcchhc-CC-CcEEEEEEeCCCCcc-ceeeccCCCCCCccccCCCCcCcEEEEeCC
Confidence 75321100 0011124578888876 77 999999999876421 222222210 1 22222222
Q ss_pred CCc--cCCCCeeeEEEEeccCC-C---CceeEEEECCEeccc
Q psy14532 213 QPD--LHSGDRAGVQCLVTKGD-P---PLTISWLKNGLPILS 248 (258)
Q Consensus 213 ~~~--~~~g~~~~l~C~~~~~~-p---~~~~~W~~~g~~l~~ 248 (258)
... +.+|+.+.|.|.+. +. | .+.|.|+++|..+..
T Consensus 237 ~~~~~v~~G~~~~L~C~~~-g~~p~P~~~~i~W~k~~~~~~~ 277 (434)
T 1igy_B 237 KPKDTLLITVTPKVTCVVV-DISKDDPEVQFSWFVDNVEVHT 277 (434)
T ss_dssp CHHHHHSTTSCCEEEEEEC-CCCSSCCCCCBCBBSSSCCBCC
T ss_pred ChHHhcccCCCcEEEEEEe-ccccCCCCeEEEEEeCCcccCC
Confidence 222 78999999999996 55 3 468999999988754
No 118
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.92 E-value=1.6e-23 Score=169.03 Aligned_cols=219 Identities=16% Similarity=0.236 Sum_probs=136.9
Q ss_pred cCCCceEEEEEEeec-CC-C-eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEEE
Q psy14532 15 QPGPPVSLKCIATGN-PT-P-HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYW 91 (258)
Q Consensus 15 ~~g~~v~l~C~~~~~-~~-~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~ 91 (258)
.+|+.++|.|.+.+. |. + .|.|++++....... ....... ..........|.|.++ ...|+|.|+
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~-~~~~~~~----------~~g~~~~~s~L~i~~~-~~~d~g~Y~ 206 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARN-FPPSQDA----------SGDLYTTSSQLTLPAT-QCLAGKSVT 206 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEe-CCceecC----------CCCcEEEEEEEEechh-HcCCCceEE
Confidence 689999999999986 65 4 999999874321100 0000000 0001111235788888 888999999
Q ss_pred EEEEeCCcceeeceEEEEEe------------------cCCee--ccCCCcceecCCcEEEEeeeCcccC---ceEEEEe
Q psy14532 92 CTATNKQGRSSSQNVHISVT------------------GAPFV--RPMGNVSAIAGEPLYLGCPVAGYPI---ESITWQK 148 (258)
Q Consensus 92 C~~~~~~~~~~~~~~~l~v~------------------~~~~~--~~~~~~~~~~g~~~~l~C~~~~~~~---~~i~W~~ 148 (258)
|.+.+..+......+.|.|. ..+.+ ..+....+.+|+.+.|.|.+.+.++ +.++| +
T Consensus 207 C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~ 285 (475)
T 1iga_A 207 CHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T 285 (475)
T ss_pred EEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C
Confidence 99999876432233333231 12221 1122233578999999999988644 69999 4
Q ss_pred CCcccCCCc--ceE------EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEE---eecCCccccCCCC-Ccc
Q psy14532 149 GVQQLPLNR--RQK------VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHIS---VTVPPKIAPFEFQ-PDL 216 (258)
Q Consensus 149 ~~~~~~~~~--~~~------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~---v~~~p~~~~~~~~-~~~ 216 (258)
+..+.... ... ....+.|.|.++.. +|+|.|+|.|.|..+.. .....|. +..+|.+...+.. ..+
T Consensus 286 -~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~-~d~G~Y~C~a~n~~~~~-~~~~~v~~~~~~~~P~v~~~~~~~~~v 362 (475)
T 1iga_A 286 -PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPW-NHGKTFTCTAAYPESKT-PLTATLSKSGNTFRPEVHLLPPPSEEL 362 (475)
T ss_pred -CCCcCCccccCceECCCCCEEEEEEEEEchHHh-ccCCcEEEEEEcCCCCC-ceEEEeecCCCCCCCeEEEECCChHHh
Confidence 33332111 000 11234689999987 99999999999987643 2222332 2456665544332 236
Q ss_pred CCCCeeeEEEEeccCCC-CceeEEEECCEecccc
Q psy14532 217 HSGDRAGVQCLVTKGDP-PLTISWLKNGLPILSA 249 (258)
Q Consensus 217 ~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~l~~~ 249 (258)
..|+.+.|.|.+.+.+| .+.|.|++||+.|..+
T Consensus 363 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 396 (475)
T 1iga_A 363 ALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 396 (475)
T ss_pred ccCCceEEEEEEeeeECCCCEEEEEECCEECCCC
Confidence 78999999999954455 3699999999998765
No 119
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.92 E-value=8.5e-24 Score=163.13 Aligned_cols=176 Identities=27% Similarity=0.421 Sum_probs=131.2
Q ss_pred eeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEE
Q psy14532 11 QQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVY 90 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y 90 (258)
...+.+|+++.|.|.+.+.|.+.+.|++++..+.......... ......+|.|.++ +..|+|.|
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~---------------~~~~~~~L~i~~v-~~~d~G~Y 195 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIK---------------LRHQQWSLVMESV-VPSDRGNY 195 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCC---------------CCTTTTEEEECSC-CGGGCCCE
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccccccee---------------cccceEEEEECCC-CcccCEEE
Confidence 4568899999999999988889999999988765442111111 1113567999999 99999999
Q ss_pred EEEEEeCCcceeeceEEEEEecC----Ceec--cCCCcceecCCcEEEEeeeCcccCceEEEEe----CCcccCCCcce-
Q psy14532 91 WCTATNKQGRSSSQNVHISVTGA----PFVR--PMGNVSAIAGEPLYLGCPVAGYPIESITWQK----GVQQLPLNRRQ- 159 (258)
Q Consensus 91 ~C~~~~~~~~~~~~~~~l~v~~~----~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~----~~~~~~~~~~~- 159 (258)
+|.+.+..+... ..+.|.|... |.+. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+......
T Consensus 196 ~C~a~n~~g~~~-~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~ 274 (334)
T 1ry7_B 196 TCVVENKFGSIR-QTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPY 274 (334)
T ss_dssp EEEEEETTEEEE-EEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBC
T ss_pred EEEEEeCCCCEE-EEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCee
Confidence 999999887765 7778888753 2222 2345678899999999999999999999999 56555433221
Q ss_pred -EEec----------CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 160 -KVFP----------NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 160 -~~~~----------~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
.+.. ...|.|.++.. +|+|.|+|.|.|..|. ....+.|.|...|
T Consensus 275 ~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~~ 329 (334)
T 1ry7_B 275 VTVLKTAGANTTDKELEVLSLHNVTF-EDAGEYTCLAGNSIGF-SHHSAWLVVLPAE 329 (334)
T ss_dssp CCCCCCSSCSCSCTTCCCEEECSCCT-TSCSEEEEEEEESSCC-EEEEEEEEEECSC
T ss_pred EEEeecCccccccccccEEEEccCCH-HHCEEEEEEEeCCCCe-EEEEEEEEEEECC
Confidence 1111 13799999997 9999999999999884 5567778887654
No 120
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=152.49 Aligned_cols=192 Identities=16% Similarity=0.215 Sum_probs=124.6
Q ss_pred eeceeeeecCCCceEEEEEEeecCCC---eEEEeeCCEeCcCCcc-----ccceecccceeeccccccceeeeeCCcEEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNPTP---HISWKLDGYPLAGDRH-----ENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~~~---~v~W~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
..+..+.+.+|++++|.|.+.+.+.+ .|.|+|++..+..... ...............+........+++|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 35567889999999999999887655 4899997654432100 000001000000111111112223568999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCC--eeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCC
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP--FVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLN 156 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~--~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~ 156 (258)
.++ +.+|+|.|.|.+.+..+........+.+..++ .........+..|+.+.+.|.+.+.|.+.|+|++++..+...
T Consensus 84 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~ 162 (218)
T 4frw_A 84 RNA-VQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS 162 (218)
T ss_dssp SSC-CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE
T ss_pred eec-cHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccC
Confidence 999 99999999999988766554344445554433 222344456677899999999999999999999998876544
Q ss_pred cceEEe----cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 157 RRQKVF----PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 157 ~~~~~~----~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
...... ..+.|.|.++.. +|+|.|+|.|.|..+.. ...+.+.|
T Consensus 163 ~~~~~~~~~~~~s~L~i~~~~~-~d~g~YtC~a~N~~g~~-~~~~t~~v 209 (218)
T 4frw_A 163 RSFKHSRSAAVTSEFHLVPSRS-MNGQPLTCVVSHPGLLQ-DQRITHIL 209 (218)
T ss_dssp EEEECSSSEEEEEEEEECCCGG-GTTCEEEEEEECTTCSS-CEEEEEEC
T ss_pred ceEecCCcEEEEEEEEEeeCCH-HhCeEEEEEEEeCCCCe-EEEEEEEE
Confidence 332221 123688988887 99999999999998743 33344443
No 121
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.91 E-value=3e-23 Score=167.48 Aligned_cols=235 Identities=19% Similarity=0.286 Sum_probs=139.2
Q ss_pred ceeeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee-----eCCc
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF-----PNGT 75 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 75 (258)
.+..+..+.+.+|++++|.|.+.+.+ ...+.|||.. .....-. .....+........+..|..+. .+.+
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (475)
T 1iga_A 4 LLEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMG--WISAGTGNTKYSQKFRGRVTFTRDTSATTAY 81 (475)
T ss_pred eeccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEE--EEecCCCceecCcccCCceEEEEcCCCCeEE
Confidence 34567788999999999999998753 5689999853 2110000 0000000000011112222222 2357
Q ss_pred EEEeecccCCCceEEEEEEEeCCcc-----eeeceEEEEEec----CCeeccCCCcceecCCcEEEEeeeCcc-cC-c-e
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQGR-----SSSQNVHISVTG----APFVRPMGNVSAIAGEPLYLGCPVAGY-PI-E-S 143 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~~l~v~~----~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~-~ 143 (258)
|.|.++ +.+|+|.|.|.+.+..+. .....+.|.|.. +|.+.......+.+|+.+.|.|.+.+. |. + .
T Consensus 82 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~p~~ 160 (475)
T 1iga_A 82 MGLSSL-RPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLS 160 (475)
T ss_pred EEECCC-ChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeeecCCCceE
Confidence 999999 999999999999987642 122455677763 233322222233689999999999886 65 4 9
Q ss_pred EEEEeCCcccCCCcceEE--ecC------CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee-------------
Q psy14532 144 ITWQKGVQQLPLNRRQKV--FPN------GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT------------- 202 (258)
Q Consensus 144 i~W~~~~~~~~~~~~~~~--~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~------------- 202 (258)
|.|++++........... ..+ +.|.|..+.. +|+|.|+|.|.|..+......+.+.|.
T Consensus 161 v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~ 239 (475)
T 1iga_A 161 VTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQC-LAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPT 239 (475)
T ss_pred EEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHc-CCCceEEEEEEECCCCceeeeEecccccCccccccccccc
Confidence 999988753221110000 112 2467777765 899999999999876333333433331
Q ss_pred -----cCCccccC-CCCCccCCCCeeeEEEEeccCCCC---ceeEEEECCEec
Q psy14532 203 -----VPPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPP---LTISWLKNGLPI 246 (258)
Q Consensus 203 -----~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~---~~~~W~~~g~~l 246 (258)
.+|.+... +....+.+|+.+.|.|.+. +.++ +.|.| ++..+
T Consensus 240 ~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~-g~~p~~~~~i~W--~~~~~ 289 (475)
T 1iga_A 240 PSPSCCHPRLSLHRPALEDLLLGSEANLTCTLT-GLRDASGVTFTW--TPSSG 289 (475)
T ss_pred CCCCCCCcEEEEcCCChHHhccCCceEEEEEEE-cccCCCceEEEE--CCCCc
Confidence 12222111 2222358899999999995 5433 69999 44444
No 122
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.91 E-value=1.3e-23 Score=157.13 Aligned_cols=211 Identities=16% Similarity=0.270 Sum_probs=123.6
Q ss_pred CcceeeceeeeecCCCceEEEEEEe---ecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceee-----eeCC
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIAT---GNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKV-----FPNG 74 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~---~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 74 (258)
+.+...+..+.+.+|++++|.|.+. +.+.+.+.|++++......... .............+..+..+ ..++
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYV-LFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEE-EEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEE-EEEcCCCcccCccccCceEEeecCCCCEE
Confidence 5567778889999999999999987 5666789999965422211000 00000001111122222222 2347
Q ss_pred cEEEeecccCCCceEEEEEEEeCCcce-eeceEEEEEecCCeeccCCCcceecCCcEEEEeee---CcccCceEEEEeCC
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPV---AGYPIESITWQKGV 150 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~---~~~~~~~i~W~~~~ 150 (258)
+|.|.++ +.+|+|.|+|.+.+..+.. ....+.|.|... .+....+..|+.+.|.|.+ .+.|.+.+.|++++
T Consensus 85 ~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~----~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 85 SLLLQDV-QKADEGIYTCEIRLKNESMVMKKPVELWVLPE----EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSS 159 (268)
T ss_dssp CEEECSC-CGGGCEEEEEEEEETTCCCEEEEEEEEEEECC----CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEEC
T ss_pred EEEECCC-CHhHCEEEEEEEEecCCcceEEEEEEEEEecc----CCCccccccCCcEEEEEEecCCCCCCccceEEEecC
Confidence 8999999 9999999999999865443 335566666522 2345678899999999999 66788999999943
Q ss_pred ccc-CC---------------------CcceEE-----ecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe-e
Q psy14532 151 QQL-PL---------------------NRRQKV-----FPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV-T 202 (258)
Q Consensus 151 ~~~-~~---------------------~~~~~~-----~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v-~ 202 (258)
... .. ..+..+ ...+.|.|.++.. +|+|.|+|.|.|..+ ..+..+.|.| .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g-~~~~~~~l~V~~ 237 (268)
T 3mj6_A 160 GSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKE-SDQGIYTCSIYVGKL-ESRKTIVLHVVQ 237 (268)
T ss_dssp TTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCG-GGCEEEEEEEEETTE-EEEEEEEEEEEC
T ss_pred CCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCCh-hhCeEEEEEEEcCCc-eEEEEEEEEEEc
Confidence 321 10 011111 2356799999997 999999999999776 4556777777 4
Q ss_pred cCCccccCCCCCccCCCCe
Q psy14532 203 VPPKIAPFEFQPDLHSGDR 221 (258)
Q Consensus 203 ~~p~~~~~~~~~~~~~g~~ 221 (258)
.+|.+...+....+..|+.
T Consensus 238 ~~p~~~~~p~~~~~~~~q~ 256 (268)
T 3mj6_A 238 DEFQRTISPTPPTDKGQQG 256 (268)
T ss_dssp C------------------
T ss_pred CCCeeeeCCCCCCCCccee
Confidence 4555555555555555543
No 123
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.91 E-value=4.6e-24 Score=150.75 Aligned_cols=173 Identities=20% Similarity=0.239 Sum_probs=121.9
Q ss_pred eeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeee------eCCcEEEeecccC
Q psy14532 11 QQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVF------PNGTLLIENVQKD 84 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~i~~~~~~ 84 (258)
.+.+.+|++++|.|.+.+.+.+.+.|++++..+........... ....+..+.... .+.+|.|.++ +.
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~~L~i~~v-~~ 77 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTK-----GPSKLNDRADSRRSLWDQGNFPLIIKNL-KI 77 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEE-----CSCTTGGGEECCGGGGGGTBCCEEECSC-CG
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEec-----CChhhCCccccccccccCCeEEEEEecC-CH
Confidence 46788999999999998888889999998752111100000000 001111111111 1445999999 99
Q ss_pred CCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecC
Q psy14532 85 HDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPN 164 (258)
Q Consensus 85 ~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~ 164 (258)
+|+|.|+|.+.+..+ .+.|.|... ..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....
T Consensus 78 ~D~G~Y~C~~~~~~~-----~~~l~V~~~---~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~-------~~~~ 142 (184)
T 2ny1_B 78 EDSDTYICEVEDQKE-----EVQLLVFGL---TANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGG 142 (184)
T ss_dssp GGCEEEEEEETTEEE-----EEEEEEEEE---EESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE-------EEES
T ss_pred HHCEEEEEEEEcCCC-----cEEEEEEEe---cCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc-------ccCc
Confidence 999999999987643 345555532 2234457889999999999988899999999987654 2356
Q ss_pred CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 165 GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 165 ~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
+.|.|.++.. +|+|.|+|.|.|..+ ..+..+.|.|...|.
T Consensus 143 ~~L~i~~v~~-~d~G~Y~C~a~n~~~-~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 143 KTLSVSQLEL-QDSGTWTCTVLQNQK-KVEFKIDIVVLAFQK 182 (184)
T ss_dssp SEEEESSCCG-GGCEEEEEEEEETTE-EEEEEEEEEEECCCC
T ss_pred eEEEEecCCc-CCCeEEEEEEEECCc-eEEEEEEEEEEecCC
Confidence 7899999997 999999999998765 455677787776654
No 124
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.91 E-value=7.2e-24 Score=160.39 Aligned_cols=181 Identities=20% Similarity=0.263 Sum_probs=131.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCC-CeEEEe-eCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPT-PHISWK-LDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~-~~v~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.+...+.+..+.+|+++.|.|.+.+ |. +.+.|+ +++..+... .++ ....++.|.|.
T Consensus 91 ~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~---~~~----------------~~~~~~~L~i~ 150 (290)
T 2o26_X 91 PAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD---LTF----------------VPNPKAGITIK 150 (290)
T ss_dssp SSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT---CEE----------------EEETTTEEEEE
T ss_pred CCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC---Cce----------------eeCCCCCEEEe
Confidence 344445566778889999999999985 67 899995 577665432 111 12234689999
Q ss_pred ecccCCCce-EEEEEEEeCCcceeeceEEEEEe----cCCeec-cCCCcceecCCcEEEEeeeCcccCce-EEEEeCCcc
Q psy14532 80 NVQKDHDRG-VYWCTATNKQGRSSSQNVHISVT----GAPFVR-PMGNVSAIAGEPLYLGCPVAGYPIES-ITWQKGVQQ 152 (258)
Q Consensus 80 ~~~~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~----~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~-i~W~~~~~~ 152 (258)
++ +.+|+| .|+|.+.+..+...+..+.|.|. .+|.+. .+....+.+|+.+.|.|.+.+.|.+. +.|++++..
T Consensus 151 ~v-~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 151 NV-KRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp SC-CGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSS
T ss_pred cc-cHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCC
Confidence 99 999999 99999999865544456788876 445443 34455788999999999999988886 999999877
Q ss_pred c----CCCcce------EEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 153 L----PLNRRQ------KVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 153 ~----~~~~~~------~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
+ ...... .....+.|.|.++.. +|+|.|+|.|.|..+. .+..+.|.|..+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~~~P 290 (290)
T 2o26_X 230 PQHIAQVKHNSWHRGDFNYERQETLTISSARV-DDSGVFMCYANNTFGS-ANVTTTLKVVEKG 290 (290)
T ss_dssp EEECCCEECCEEEEETTEEEEEEEEEESSCCS-SSCEEEEEEEECSSCE-EEEEEEECC----
T ss_pred CccceeecccccccCceeeEEEEEEEEcCCCc-ccCeEEEEEEeCCCCc-EEEEEEEEEEeCC
Confidence 3 322221 223345799999997 9999999999999884 4566777776554
No 125
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.91 E-value=2e-23 Score=150.95 Aligned_cols=178 Identities=16% Similarity=0.230 Sum_probs=120.1
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCccccceecccceeecccccccee---eeeCCcEE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQK---VFPNGTLL 77 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 77 (258)
|.+...+ .+.+.+|++|+|.|.+.+.+.+.+.|+|. +...... +............+.. ...+.+|.
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~-------~~~~~~~~~~~~~r~~~~~~~~~~~L~ 73 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLV-------IYEDNRRPSGIPDHFSGSNSGNMATLT 73 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEE-------EBTTTBCCTTSCTTEEEEEETTEEEEE
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEE-------EEECCccCCCccCcEEEEecCCEEEEE
Confidence 5666777 88999999999999999888899999983 2111100 0000000000111111 22345799
Q ss_pred EeecccCCCceEEEEEEEeCCc--ceeeceEEEEEe----cCCeecc-CCCcceecCCcEEEEeeeCcc-cC-ceEEEEe
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG--RSSSQNVHISVT----GAPFVRP-MGNVSAIAGEPLYLGCPVAGY-PI-ESITWQK 148 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~--~~~~~~~~l~v~----~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~i~W~~ 148 (258)
|.++ +.+|+|.|+|.+.+..+ ......+.|.|. .+|.+.. .....+..|+.+.|.|.+.+. |+ +.+.|++
T Consensus 74 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k 152 (213)
T 3mj8_L 74 ISKA-QAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEA 152 (213)
T ss_dssp ESSC-CGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred ECCC-ChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEc
Confidence 9999 99999999999999877 233467788887 4444332 334445579999999999885 44 4999999
Q ss_pred CCcccCCCcc--------eEEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 149 GVQQLPLNRR--------QKVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 149 ~~~~~~~~~~--------~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
++..+..... ......+.|.|.++.. +|.|.|+|.|.|..+
T Consensus 153 ~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~ 201 (213)
T 3mj8_L 153 DGTPITQGVKTTQPSKSDSKYMATSYLTMTADAW-KSRNTFICKVTHGGN 201 (213)
T ss_dssp TTEEECTTEEECCCEEETTEEEEEEEEEEESHHH-HSCSCEEEEEEETTE
T ss_pred CCcccCCCcccCCcCccCCcEEEEEEEEEeHHHc-CCCCEEEEEEEECCc
Confidence 9987754211 1111224588888887 899999999999764
No 126
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.91 E-value=2.8e-23 Score=151.56 Aligned_cols=187 Identities=17% Similarity=0.183 Sum_probs=112.8
Q ss_pred eeeeecCCCceEEEEEEeecCCC---eEEEeeCCEeCcCCccccceecccceeeccccccceee------eeCCcEEEee
Q psy14532 10 IQQTLQPGPPVSLKCIATGNPTP---HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKV------FPNGTLLIEN 80 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~~~~~~---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~i~~ 80 (258)
.++.+.+|++|+|.|.+.+.+.+ .|.|+|++............... ......+..|... ..+.+|.|.+
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~--~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVE--DRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECG--GGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcc--cccCccccceEEEecccccCCeEEEEEee
Confidence 45778999999999998765443 79999976422110000000000 0001111111111 1245799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCc-ccCceEEEEeCCccc-CCCcc
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAG-YPIESITWQKGVQQL-PLNRR 158 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~i~W~~~~~~~-~~~~~ 158 (258)
+ +..|+|.|+|.+.+..+... ..+.+.+..... .......+..|+.+.|.|.+.+ .|.|.|+|++++..+ .....
T Consensus 90 v-~~~D~G~Y~C~a~n~~~~~~-~~v~~~~~~~~~-~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~ 166 (226)
T 4f80_A 90 V-TASDSGKYLCYFQDGDFYEK-ALVELKVAALGS-DLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEA 166 (226)
T ss_dssp C-CGGGCEEEEEEEEETTEEEE-EEEEEEEEBCCC-CCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEEC
T ss_pred C-chHHCeeEEEEEECCCcEEE-EEEEEeecccee-cccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCce
Confidence 9 99999999999999877655 555555543332 2233456778999999999987 589999999965443 32222
Q ss_pred -eEEecCCeE---EEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 159 -QKVFPNGTL---LIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 159 -~~~~~~~~l---~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
.....++.+ .+..+.. +|+|.|+|.|.|..+. ....+.|.|..
T Consensus 167 ~~~~~~~g~~~v~s~l~v~~-~d~G~YtC~a~N~~g~-~~~~~~v~v~e 213 (226)
T 4f80_A 167 PVVADGVGLYAVAASVIMRG-SSGEGVSCTIRSSLLG-LEKTASISIAD 213 (226)
T ss_dssp CCEECTTSCEEEEEEEEECC-----CEEEEEEETTTT-EEEEEEECCCT
T ss_pred EEEECCCCcEEEEEEEEech-hcCcEEEEEEEeCCCC-eEEEEEEEECC
Confidence 222334433 3445665 8999999999999873 44556666643
No 127
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.91 E-value=5.2e-24 Score=149.23 Aligned_cols=159 Identities=15% Similarity=0.162 Sum_probs=112.6
Q ss_pred eeeeecCCCceEEEEEEee--cCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCc
Q psy14532 10 IQQTLQPGPPVSLKCIATG--NPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDR 87 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~~--~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 87 (258)
..+.+.+|++|+|.|.... .+.+.|.|+|++..+..... ... ......+..+..+++|.|.++ +.+|+
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~-~~~--------~~~~~~r~~~~~~gsL~I~~v-~~~D~ 73 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKR-KMK--------PFLKSGAFEILANGDLKIKNL-TRDDS 73 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEET-TSC--------CEESSTTEEECTTSCEEESSC-CGGGC
T ss_pred eEEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcC-CCe--------ecCCCCeEEECCCCcEEEccc-ccccC
Confidence 3467889999999995332 45668999999875542211 000 001123444456788999999 99999
Q ss_pred eEEEEEEEeCCcce-eeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCe
Q psy14532 88 GVYWCTATNKQGRS-SSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGT 166 (258)
Q Consensus 88 G~Y~C~~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~ 166 (258)
|.|+|.+.+..+.. ....+.|.|..++. .......+..+.|.|.+.+.|.+.+.|++++..+.... .
T Consensus 74 G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~----~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~--------~ 141 (176)
T 1hng_A 74 GTYNVTVYSTNGTRILNKALDLRILEMVS----KPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR--------Q 141 (176)
T ss_dssp EEEEEEEEETTCCEEEEEEEEEEEECCCC----CCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEES--------S
T ss_pred EEEEEEEEeCCCCEEEEEEEEEEEeCCCC----CCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCC--------c
Confidence 99999999988875 33677888876421 11222334569999999999999999999988765332 2
Q ss_pred EEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 167 LLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 167 l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
+.|.++.. +|.|.|+|.|.|..+.
T Consensus 142 ~~i~~~~~-~d~G~Y~C~a~N~~g~ 165 (176)
T 1hng_A 142 KTMSYQWT-NLRAPFKCKAVNRVSQ 165 (176)
T ss_dssp SEEEEECS-CCSSCEEEEEEETTEE
T ss_pred EEEEEEEc-cCCeEEEEEEEecCCC
Confidence 44556766 9999999999999873
No 128
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.91 E-value=7.6e-23 Score=148.75 Aligned_cols=192 Identities=16% Similarity=0.291 Sum_probs=120.7
Q ss_pred eeeceeeeecCCCceEEEEEEeecC-----CCeEEEeeCCEeCcCCccccceecccceeeccccccceeee------eCC
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNP-----TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVF------PNG 74 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~-----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 74 (258)
...+..+.+.+|++++|.|.+.+.| ...+.|+|++..+..... ..... ......+..+..+. .+.
T Consensus 5 ~~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~-g~~~~---~~~~~~~~~r~~~~~~~~~~~~~ 80 (222)
T 3sbw_C 5 TVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVH-GEEDL---KVQHSSYRQRARLLKDQLSLGNA 80 (222)
T ss_dssp BCSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEET-TEECS---SSSCGGGSSSEEECHHHHTTTEE
T ss_pred ecCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeC-Ccccc---ccccccccCceEEccccccCCEE
Confidence 3455667889999999999987654 348999998744322110 00000 00011122222222 134
Q ss_pred cEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCC-CcceecCCcEEEEeeeCcccCceEEEEeC-Ccc
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMG-NVSAIAGEPLYLGCPVAGYPIESITWQKG-VQQ 152 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~i~W~~~-~~~ 152 (258)
+|.|.++ +.+|+|.|+|.+.+ .+... ..+.|.|..++...... ...+..|+.+.|.|.+.|.|.+.+.|+++ +..
T Consensus 81 ~L~I~~v-~~~D~G~Y~C~~~~-~~~~~-~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~ 157 (222)
T 3sbw_C 81 ALQITDV-KLQDAGVYRCMISY-GGADY-KRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQV 157 (222)
T ss_dssp EEEESSC-CGGGCEEEEEEEES-SSEEE-EEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCE
T ss_pred EEEEcCc-ccccCeEEEEEEEe-CCCce-eEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCce
Confidence 7999999 99999999999998 44444 67888888665332211 12456799999999999999999999998 554
Q ss_pred cCCCcceEE--ecCCeEEEE---ecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 153 LPLNRRQKV--FPNGTLLIE---NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 153 ~~~~~~~~~--~~~~~l~i~---~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
+........ ..++.+.+. .+.. .|.|.|+|.|.|..+ .....+.|.|..+|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~l~v~~-~d~g~Y~C~a~n~~g-~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 158 LSGKTTTTNSKREEKLFNVTSTLRINT-TTNEIFYCTFRRLDP-EENHTAELVIPELPL 214 (222)
T ss_dssp ECCEEEEEECC----CEEEEEEEEEEC-CTTCEEEEEEEETTT-TEEEEEEEECCCC--
T ss_pred ecCccceEEEcCCCCCEEEEEEEEEec-cCCcEEEEEEEeCcc-ceeeEEEEEecCCcc
Confidence 443322211 222333222 4554 899999999999988 455667777766554
No 129
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.91 E-value=8.8e-23 Score=147.52 Aligned_cols=178 Identities=19% Similarity=0.224 Sum_probs=119.0
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCcEEE
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLLI 78 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i 78 (258)
.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|++ ..+... .... ......+..+.... .+.+|.|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~------~~~~-~~~~~~~~~r~~~~~~~~~~~L~I 75 (213)
T 3d9a_L 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLL------IKYA-SQSISGIPSRFSGSGSGTDFTLSI 75 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEE------EETT-TEECTTSCTTEEEEEETTEEEEEE
T ss_pred eEEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEE------EEEc-ccccccccccEEEEcCCCEEEEEE
Confidence 3556688899999999999999998888899999853 111000 0000 00000111122221 2347999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCc-ccCc-eEEEEeCCcc
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAG-YPIE-SITWQKGVQQ 152 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~~~~~~ 152 (258)
.++ +.+|+|.|+|.+.+..+........|.|.. +|.+.. ........|+.+.|.|.+.+ .|.+ .+.|++++..
T Consensus 76 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~ 154 (213)
T 3d9a_L 76 NSV-ETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE 154 (213)
T ss_dssp SSC-CGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CCC-ChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCc
Confidence 999 999999999999988765443455677764 343332 33334457899999999987 5554 8999999987
Q ss_pred cCCCcceE--E--------ecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 153 LPLNRRQK--V--------FPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 153 ~~~~~~~~--~--------~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+....... . ...+.|.|.++.. +|+|.|+|.|.|...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~ 201 (213)
T 3d9a_L 155 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEY-ERHNSYTCEATHKTS 201 (213)
T ss_dssp ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHH-HHCCEEEEEEECTTC
T ss_pred CcceeeecCCCccCCCCCEEEEEEEEEecccc-CCCCEEEEEEEEccC
Confidence 76541110 0 1123789999987 899999999999764
No 130
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.91 E-value=5e-23 Score=157.53 Aligned_cols=170 Identities=21% Similarity=0.286 Sum_probs=125.4
Q ss_pred eeeecCCCceEEEEEE------eecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccC
Q psy14532 11 QQTLQPGPPVSLKCIA------TGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKD 84 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~~------~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 84 (258)
...+.+|+++.|.|.+ .+.|.+.+.|+|++..+.... .+ ....+++|.|.++ +.
T Consensus 112 ~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~--~~-----------------~~~~~~~L~i~~v-~~ 171 (315)
T 1itb_B 112 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN--IH-----------------FSGVKDRLIVMNV-AE 171 (315)
T ss_dssp EEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCS--SS-----------------EEEETTEEEESSC-CG
T ss_pred ceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCcc--ce-----------------EeecCceEEEEec-ee
Confidence 3568899999999998 778889999999998875431 11 1223568999999 99
Q ss_pred CCceEEEEEEE-eCCccee--eceEEEEEe-----cCCeeccCCC--cceecCCcEEEEeeeCcccCceEEEEeCCcccC
Q psy14532 85 HDRGVYWCTAT-NKQGRSS--SQNVHISVT-----GAPFVRPMGN--VSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP 154 (258)
Q Consensus 85 ~d~G~Y~C~~~-~~~~~~~--~~~~~l~v~-----~~~~~~~~~~--~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~ 154 (258)
.|+|.|+|.+. +..+... ...+.+.+. .+|.+..... ..+..|+.+.|.|.+.+.|.+.+.|++++..+.
T Consensus 172 ~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~ 251 (315)
T 1itb_B 172 KHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 251 (315)
T ss_dssp GGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECC
T ss_pred hhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECC
Confidence 99999999999 6666553 244444444 3444433332 467899999999999999999999999998876
Q ss_pred CCcceE------Ee---------cCCeEEEEecccCCC-CcEEEEEEEeCCCCCccceEEEEee
Q psy14532 155 LNRRQK------VF---------PNGTLLIENVQKDHD-RGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 155 ~~~~~~------~~---------~~~~l~i~~~~~~~~-~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
...... .. ..+.|.|.++.. +| +|.|+|.|.|..|. ....+.|.|.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~~G~Y~C~a~N~~G~-~~~~~~l~v~ 313 (315)
T 1itb_B 252 EDDPVLGEDYYSVENPANKRRSTLITVLNISEIES-RFYKHPFTCFAKNTHGI-DAAYIQLIYP 313 (315)
T ss_dssp TTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCG-GGGTSCEEEEEECTTCC-EEEEEEEECC
T ss_pred cccccccccceeeeccCCCceeEEEEEEEEeecCH-HHcCCceEEEEecCCCc-eeEEEEEEec
Confidence 543211 11 123799999997 89 99999999999884 4455666553
No 131
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.90 E-value=5.9e-24 Score=150.37 Aligned_cols=143 Identities=18% Similarity=0.325 Sum_probs=106.0
Q ss_pred eeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee-cccCCCceEE
Q psy14532 12 QTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN-VQKDHDRGVY 90 (258)
Q Consensus 12 ~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~d~G~Y 90 (258)
..+.+|++++|.|.+.+ + +.+.|+|+|..+... .+++|.|.+ + +.+|+|.|
T Consensus 9 ~v~~~G~~v~L~C~~~~-~-~~i~W~k~g~~l~~~-------------------------~~~~L~I~~~~-~~~D~G~Y 60 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-D-ENLKWEKNGQELPQK-------------------------HDKHLVLQDFS-EVEDSGYY 60 (186)
T ss_dssp EEEEETTEEEEECSSCC-C-TTCEEEETTEEECSC-------------------------CCSEEEEESCC-TTTSCEEE
T ss_pred EEEeCCcEEEEEEeCCC-C-CceEEEECCEECCCC-------------------------CCCEEEECCCC-ccccCEEE
Confidence 34568999999999887 3 359999999887643 145799999 9 99999999
Q ss_pred EEEEEeCCcceeeceEEEEEecC--Cee----------------cc---C--CC---cceecCCcEEEEeeeCcccCceE
Q psy14532 91 WCTATNKQGRSSSQNVHISVTGA--PFV----------------RP---M--GN---VSAIAGEPLYLGCPVAGYPIESI 144 (258)
Q Consensus 91 ~C~~~~~~~~~~~~~~~l~v~~~--~~~----------------~~---~--~~---~~~~~g~~~~l~C~~~~~~~~~i 144 (258)
+|.+.+..+... ..+.+.|... +.. .. . .. ..+..|+.+.|.|.+ |.+.+
T Consensus 61 ~C~a~n~~g~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i 136 (186)
T 1jbj_A 61 VCYTPASNKNTY-LYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTI 136 (186)
T ss_dssp EEECSSCCCCCC-EEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCE
T ss_pred EEEEEeCCCcEE-EEEEEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeE
Confidence 999999877633 4444433321 110 00 0 00 123489999999998 77899
Q ss_pred EEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 145 TWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
.|++++..+..... ..+.|.|.++.. +|+|.|+|.|.|..++
T Consensus 137 ~W~k~g~~i~~~~~----~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~ 178 (186)
T 1jbj_A 137 KWLKDGSIISPLNA----TKNTWNLGNNAK-DPRGTYQCQGAKETSN 178 (186)
T ss_dssp EEEETTEECCCSSC----CSSCCEEEETTS-CCEEEEEEEESSCEEE
T ss_pred EEEECCEECcccCC----CcceEEECCCCc-CcCEEEEEEEEcCcCC
Confidence 99999988764322 556899999997 9999999999998763
No 132
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.90 E-value=1.3e-22 Score=146.59 Aligned_cols=175 Identities=19% Similarity=0.225 Sum_probs=118.4
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCcEE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLL 77 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 77 (258)
|.+...+.++.+.+|++|+|.|.+.+.+.+.+.|+|+. ...... ..........+..+.... .+.+|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~-------~~~~~~~~~~~~~r~~~~~~~~~~~L~ 74 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLL-------IYETSTLASGVPSRFKGSGSGTDFTLT 74 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEE-------EETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEE-------EEeCCccCCCCCccEEEecCCCEEEEE
Confidence 66777888999999999999999998888899999842 111000 000000001111122211 234799
Q ss_pred EeecccCCCceEEEEEEEeCCcc--eeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCc-ccCceEEEEeCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGR--SSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAG-YPIESITWQKGV 150 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~~i~W~~~~ 150 (258)
|.++ +.+|+|.|+|.+.+..+. .......|.|.. +|.+.. .....+..|+.+.|.|.+.+ .|.+.+.|++++
T Consensus 75 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g 153 (213)
T 3nl4_L 75 ISDL-ECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDG 153 (213)
T ss_dssp ECSC-CGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETT
T ss_pred ECCC-ChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCC
Confidence 9999 999999999999987663 333555667643 233322 33344567999999999988 888999999999
Q ss_pred cccCCCc----------ceEEecCCeEEEEecccCCCCcEEEEEEE
Q psy14532 151 QQLPLNR----------RQKVFPNGTLLIENVQKDHDRGVYWCTAT 186 (258)
Q Consensus 151 ~~~~~~~----------~~~~~~~~~l~i~~~~~~~~~g~y~C~~~ 186 (258)
..+.... .......+.|.|.++.. +|+|.|+|.|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~Y~C~a~ 198 (213)
T 3nl4_L 154 TTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEY-NSHKEYTCKVT 198 (213)
T ss_dssp EECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHH-HTCCEEEEEEE
T ss_pred ccCCCCeecccCcccCCCCeEEEEEEEEecHHHc-CCCCeEEEEEE
Confidence 8775422 01111224588888887 99999999999
No 133
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.90 E-value=2.3e-23 Score=152.39 Aligned_cols=175 Identities=20% Similarity=0.325 Sum_probs=117.6
Q ss_pred eeeceeeeecCCCceEEEEEEeecCC-CeEEEeeCCEeCcCCccccceecccceeecccccccee----------eeeCC
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNPT-PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQK----------VFPNG 74 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 74 (258)
+..+.++.+.+|+++.|.|.+.+.+. +.+.|++++...... . +.........+..+.. +..++
T Consensus 4 v~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~----~--~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 77 (231)
T 2pet_A 4 LSVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARP----R--LASAEMQGSELQVTMHDTRGRSPPYQLDSQG 77 (231)
T ss_dssp CCCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCC----E--EEEEEEETTEEEEEECCCSCCSSCCEECTTC
T ss_pred ccCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeE----E--EEeccccCCccccccccccccccccccCCCc
Confidence 34667888999999999999988874 799999865321100 0 0000000000111111 34456
Q ss_pred cEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCee---cc-CCCcceecCCcE-EEEeee-CcccCceEEEEe
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFV---RP-MGNVSAIAGEPL-YLGCPV-AGYPIESITWQK 148 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~---~~-~~~~~~~~g~~~-~l~C~~-~~~~~~~i~W~~ 148 (258)
+|.|.++ +.+|+|.|+|.+.+.........+.|.|..+|.. .. .....+..|+.+ .|.|.+ .+.|.+.+.|++
T Consensus 78 ~L~i~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~ 156 (231)
T 2pet_A 78 RLVLAEA-QVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYR 156 (231)
T ss_dssp CEEESSC-CGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE
T ss_pred eEEEccc-CcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEE
Confidence 7999999 9999999999999987333347888888866432 21 333456688887 999999 889999999999
Q ss_pred CCcccCCCc----ceEEec------C------CeEEEEecccCCCCcEEEEEEEeC
Q psy14532 149 GVQQLPLNR----RQKVFP------N------GTLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 149 ~~~~~~~~~----~~~~~~------~------~~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
++..+.... +..+.. + +.|.|.... .+|.|.|+|.|.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~-~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 157 NGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRK-DDRDASFHCAAHYS 211 (231)
T ss_dssp TTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCG-GGGGCEEEEEEEEE
T ss_pred CCccCccccccccceeecceeEecCCCeEEEEEEEEEecch-hhCCceEEEEEEcC
Confidence 998776544 222211 1 346666444 36799999999995
No 134
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.90 E-value=2.4e-23 Score=149.34 Aligned_cols=155 Identities=17% Similarity=0.305 Sum_probs=110.0
Q ss_pred ecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEEEEE
Q psy14532 14 LQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCT 93 (258)
Q Consensus 14 ~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~ 93 (258)
+.+|++|+|.|.+ +.+.+.|+|+|..+.... ..+++|.|.++ +.+|+|.|+|.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~~-----------------------~~~~~L~i~~v-~~~DsG~Y~C~ 67 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFLT-----------------------EDKKKWNLGSN-AKDPRGMYQCK 67 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEEE-----------------------SSCCCEEEEEG-GGCCEEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCCC-----------------------CCCCeEEeCCC-CcCCCEEEEEE
Confidence 4689999999988 678999999998764210 02468999999 99999999999
Q ss_pred EEeCCcceeeceEEEEEe---------------------------c----CCeeccCCCcceecCCcEEEEeeeCcccCc
Q psy14532 94 ATNKQGRSSSQNVHISVT---------------------------G----APFVRPMGNVSAIAGEPLYLGCPVAGYPIE 142 (258)
Q Consensus 94 ~~~~~~~~~~~~~~l~v~---------------------------~----~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 142 (258)
+.+... ..+.|.+. . .+.+...+.....+|+.+.|.|. +.|.+
T Consensus 68 ~~~~~s----~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~--g~p~p 141 (204)
T 1sy6_A 68 GSQNKS----KPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP--QYPGS 141 (204)
T ss_dssp SSSSCC----CCEEEEEEC------------------------------------CCCCEEEEETTEEEEECS--CCCSS
T ss_pred ecCCCC----eeEEEEEEEeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC--CCCCC
Confidence 644221 23444444 0 11111112222338999999999 67888
Q ss_pred eEEEEeCCcccCCC--cceEEecCCeEEEEec-ccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 143 SITWQKGVQQLPLN--RRQKVFPNGTLLIENV-QKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 143 ~i~W~~~~~~~~~~--~~~~~~~~~~l~i~~~-~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
.+.|++++..+... .......++.|.|.++ .. +|+|.|+|.|.|..+...+..+.|.+.
T Consensus 142 ~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~-~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 142 EILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSEL-EQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp CEEEEETTEEESCCTTCTTEEEETTEEEETTCCHH-HHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred ceEEEECCEECCCccCCceEecCCCEEEEeeCCcc-ccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 99999999876543 1222235789999999 87 999999999999988555666666653
No 135
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.90 E-value=8.2e-24 Score=161.98 Aligned_cols=174 Identities=20% Similarity=0.299 Sum_probs=129.3
Q ss_pred eeeeecCCCceEEEEEEee----------cCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 10 IQQTLQPGPPVSLKCIATG----------NPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~~----------~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
....+.+|+.+.|.|.+.+ .|.+.+.|++++..+... .++... .......|.|.
T Consensus 106 ~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~---~~~~~~-------------~~~~~~~L~i~ 169 (317)
T 2y25_A 106 CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS---DRVKTG-------------VTGEQIWLQIN 169 (317)
T ss_dssp HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCC---SSEEEE-------------ECSSEEEEEEE
T ss_pred CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCC---CCeEEe-------------ccCCEEEEEEC
Confidence 4455678999999998876 678899999998877543 111111 00012359999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEec--------------------CC-eecc-CCCcceecCCcEEEEeeeC
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG--------------------AP-FVRP-MGNVSAIAGEPLYLGCPVA 137 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~--------------------~~-~~~~-~~~~~~~~g~~~~l~C~~~ 137 (258)
++ +..|+|.|+|.+.+..+... ..+.|.+.. .+ .... +....+..|+.+.|.|.+.
T Consensus 170 ~~-~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~ 247 (317)
T 2y25_A 170 EP-TPNDKGKYVMELFDGKTGHQ-KTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVW 247 (317)
T ss_dssp SC-CGGGCEEEEEEEECSSCEEE-EEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEE
T ss_pred cC-CcccCeeEEEEEEeCCceEE-EEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEe
Confidence 99 99999999999999877665 555555431 11 1111 3345788999999999999
Q ss_pred cccCceEEEEeCCcccCCCcceEEecC-C---eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 138 GYPIESITWQKGVQQLPLNRRQKVFPN-G---TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 138 ~~~~~~i~W~~~~~~~~~~~~~~~~~~-~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
+.|.+.+.|++++..+....+..+... + .|.|.++.. +|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 248 g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~~ 315 (317)
T 2y25_A 248 GDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVST-ADSGKYGLVVKNKYGS-ETSDFTVSVFI 315 (317)
T ss_dssp CSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCS-TTCEEEEEEEEETTEE-EEEEEEEEEEC
T ss_pred cCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCH-HHCEEEEEEEEeCCCe-EEEEEEEEEEc
Confidence 999999999999998877666665443 3 799999997 9999999999999884 45667777764
No 136
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.90 E-value=3.3e-23 Score=158.24 Aligned_cols=180 Identities=16% Similarity=0.254 Sum_probs=124.1
Q ss_pred CCcceeec-eeeeecCCCceEEEEEEe-ecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKF-IQQTLQPGPPVSLKCIAT-GNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~-~~~~~~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.+...+ ....+.+|+++.|.|.+. +.|.+.+.|++++..+... .++.+.... .....+|.|.
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~---~~~~~~~~~-----------~~~~~~L~i~ 171 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG---PKYKMHIDR-----------NTGIIEMFME 171 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSS---SSCEEEEET-----------TTTEEEEEES
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeC---CcEEEEEcc-----------CCCEEEEEEc
Confidence 45554444 378899999999999998 7888999999999887654 111111000 0011349999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEe---------------------cCCeeccCCCcceecCCcEEEEeeeCc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVT---------------------GAPFVRPMGNVSAIAGEPLYLGCPVAG 138 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~---------------------~~~~~~~~~~~~~~~g~~~~l~C~~~~ 138 (258)
++ +..|+|.|+|.+.+...... ..+.+. .+|.+.......+..|+.+.|.|.+.+
T Consensus 172 ~~-~~~d~G~Y~C~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~ 247 (312)
T 2y23_A 172 KL-QDEDEGTYTFQLQDGKATNH---STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVAN 247 (312)
T ss_dssp CC-CGGGCEEEEEEEESSSCEEE---EEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEES
T ss_pred cC-CcccCEeEEEEEEeCCceEE---EEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcC
Confidence 99 99999999999976543322 233331 112211112256889999999999999
Q ss_pred ccCc-eEEEEeCCcccCCCcceEEecC-CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 139 YPIE-SITWQKGVQQLPLNRRQKVFPN-GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 139 ~~~~-~i~W~~~~~~~~~~~~~~~~~~-~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
.|.+ .+.|++++..+....++.+... ..|.|.++.. +|+|.|+|.|.|..|. ....+.|.+
T Consensus 248 ~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~N~~G~-~~~~~~l~i 310 (312)
T 2y23_A 248 IKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSK-KDAGIYEVILKDDRGK-DKSRLKLVD 310 (312)
T ss_dssp CCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSG-GGCEEEEEEEESTTCC-EEEEEEECS
T ss_pred CCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCH-HHCEEEEEEEEcCCCc-eeeeeEEEe
Confidence 8887 9999999988765444444333 5799999997 9999999999999884 444555543
No 137
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.90 E-value=1.2e-23 Score=152.96 Aligned_cols=187 Identities=21% Similarity=0.310 Sum_probs=119.6
Q ss_pred eeeeecCCCceEEEEEEeecCC-----CeEEEeeCCEeCcCCccccceecccceeeccccccceeeee------CCcEEE
Q psy14532 10 IQQTLQPGPPVSLKCIATGNPT-----PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP------NGTLLI 78 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~~~~~-----~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~i 78 (258)
..+.+.+|++++|.|.+.+.+. +.+.|++++...... ...........+..+..+.. +++|.|
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~------~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 76 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVH------SFTEGRDQGSAYSNRTALFPDLLVQGNASLRL 76 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEE------EEETTEEEEESSCSCEECCTTTGGGTBCCEEE
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEE------EEcCCcccccceeCcEEEecccccCCeEEEEE
Confidence 4567899999999999887643 689999976432110 00000000112222333222 678999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecC---CeeccCCCcceecCCcEEEEeee-CcccCceEEEEe-CCccc
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA---PFVRPMGNVSAIAGEPLYLGCPV-AGYPIESITWQK-GVQQL 153 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~-~~~~~ 153 (258)
.++ +.+|+|.|+|.+.+... .. ..+.|.|..+ +.+.......+..|+.+.|.|.+ .+.|.+.+.|++ ++..+
T Consensus 77 ~~v-~~~D~G~Y~C~~~~~~~-~~-~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~ 153 (222)
T 4i0k_A 77 QRV-RVTDEGSYTCFVSIQDF-DS-AAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPL 153 (222)
T ss_dssp CSC-CGGGCSCEEEEEEECCC-CC-CCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBC
T ss_pred CCc-ccccCEEEEEEEEeCCC-ce-EEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccC
Confidence 999 99999999999998532 22 4556666544 34444444567789999999999 778999999999 44444
Q ss_pred CCCcceEE--ecCCe---EEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcc
Q psy14532 154 PLNRRQKV--FPNGT---LLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKI 207 (258)
Q Consensus 154 ~~~~~~~~--~~~~~---l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 207 (258)
........ ..++. |.|.++.. +|.|.|+|.+.|..+ .....+.|.|..+|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~l~i~~v~~-~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~~ 210 (222)
T 4i0k_A 154 TGNVTTSQMANERGLFDVHSVLRVVL-GANGTYSCLVRNPVL-QQDAHGSVTITGQPLT 210 (222)
T ss_dssp CSEEEEEEEECTTSCEEEEEEEEEEC-CTTCEEEEEEEETTT-TEEEEEEEECCC----
T ss_pred CCCcceeEEcCCCCeEEEEEEEEEEe-CCCCEEEEEEECCCC-CCceEEEEEEeCCccc
Confidence 43222222 22333 78888887 999999999999988 4567777888777643
No 138
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.90 E-value=5.6e-23 Score=157.20 Aligned_cols=185 Identities=20% Similarity=0.254 Sum_probs=132.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEe-ecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIAT-GNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.+...+....+..|+.+.|.|.+. +.|.+.+.|++++..+.... ..... ..........|.|..
T Consensus 117 ~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~---~~~~~----------~~~~~~~~s~l~i~~ 183 (313)
T 4fqp_A 117 KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTS---QVPGF----------LSGTVTVTSLWILVP 183 (313)
T ss_dssp CCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEE---EEECS----------STTCEEEEEEEEECC
T ss_pred CCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccc---eeeee----------cccccccceeeeecc
Confidence 46666666677788899999999875 57889999999876554321 10000 000111123577888
Q ss_pred cccCCCceEEEEEEEeCCcce-eeceEEEEEecCCeec--cCCCcceecCCcEEEEeeeCcccCc-eEEEEeCCcccCCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRS-SSQNVHISVTGAPFVR--PMGNVSAIAGEPLYLGCPVAGYPIE-SITWQKGVQQLPLN 156 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~-~i~W~~~~~~~~~~ 156 (258)
. ...|.|.|+|.+.+..+.. ....+.|.|..+|.+. ......+..|+.+.|.|.+.|.|.| .|.|++++..+...
T Consensus 184 ~-~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~ 262 (313)
T 4fqp_A 184 S-SQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPF 262 (313)
T ss_dssp C-GGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT
T ss_pred c-ccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCc
Confidence 8 8899999999999976543 2355566666555432 2344456678999999999999988 69999999887543
Q ss_pred cceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 157 RRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 157 ~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
. ...+++|.|.++.. +|+|.|+|.|.|..|. .+..+.|.|..+|
T Consensus 263 ~---~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~P 306 (313)
T 4fqp_A 263 A---VAQGAQLLIRPVDK-PINTTLICNVTNALGA-RQAELTVQVKEGP 306 (313)
T ss_dssp E---EEETTEEEECCCSS-CCEEEEEEEEECSSCE-EEEEEEEEEECCC
T ss_pred e---EEeCCEEEECcCCh-hhCEEEEEEEEeCCCc-EEEEEEEEEEeCC
Confidence 2 33567899999997 9999999999999984 5677888887654
No 139
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.90 E-value=1.5e-22 Score=150.14 Aligned_cols=199 Identities=16% Similarity=0.251 Sum_probs=126.0
Q ss_pred cceeeceeeeecCCCceEEEEEEeecC--CCeEEEeeC--CEeCcCCcccccee-cccceeeccccccceeeeeC-----
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLD--GYPLAGDRHENKNR-IGEARVQQLPLNRRQKVFPN----- 73 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----- 73 (258)
.+...+.++.+.+|++|+|.|.+.+.+ .+.+.|+|. +..+... .... ..........+..+..+..+
T Consensus 3 ~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 79 (253)
T 3uzq_A 3 KLLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWI---GRIDPANGDTKYDPKFQGKATITADTSSNT 79 (253)
T ss_dssp CCEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEE---EEEETTTTEEEECGGGTTTEEEEEETTTTE
T ss_pred eeEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEE---EEEccCCCcceeCCcCCCcEEEEeecCCCe
Confidence 356677889999999999999998743 679999983 2111000 0000 00001111112223333322
Q ss_pred CcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecC---------------Cee-ccCCCcceecCCcEEEEeeeC
Q psy14532 74 GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA---------------PFV-RPMGNVSAIAGEPLYLGCPVA 137 (258)
Q Consensus 74 ~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~---------------~~~-~~~~~~~~~~g~~~~l~C~~~ 137 (258)
.+|.|.++ +.+|+|.|+|.+.+..+........|.|... +.+ ..+....+.+|+++.|.|.+.
T Consensus 80 ~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 158 (253)
T 3uzq_A 80 AYLHLSSL-TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRAS 158 (253)
T ss_dssp EEEEECSC-CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEES
T ss_pred EEEEeCCC-CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEec
Confidence 24999999 9999999999999866554335667777742 222 224456788999999999998
Q ss_pred cccCc----eEEEEeCC--cccC------------CCcceEEec---CCeEEEEecccCCCCcEEEEEEEeCCCCCccce
Q psy14532 138 GYPIE----SITWQKGV--QQLP------------LNRRQKVFP---NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQN 196 (258)
Q Consensus 138 ~~~~~----~i~W~~~~--~~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~ 196 (258)
+.+.+ .+.|+++. .... ...++.... ..+|.|.++.. +|+|.|+|.+.+........-
T Consensus 159 ~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~n~~~~~fg~g 237 (253)
T 3uzq_A 159 ENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEA-DDVATYFCQRSNEVPWTFGGG 237 (253)
T ss_dssp SCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEECSSSSCCBCCC
T ss_pred CccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCH-HHCEEEEEEEccCCCcEECCC
Confidence 87765 89999852 2211 112222211 23599999997 999999999998765444556
Q ss_pred EEEEeecCCcc
Q psy14532 197 VHISVTVPPKI 207 (258)
Q Consensus 197 ~~l~v~~~p~~ 207 (258)
..|.|...+..
T Consensus 238 t~l~v~~~~~~ 248 (253)
T 3uzq_A 238 TKLEIKRPLEH 248 (253)
T ss_dssp EEEEECCC---
T ss_pred EEEEEcCCCCC
Confidence 67777665443
No 140
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.90 E-value=2.6e-22 Score=151.63 Aligned_cols=179 Identities=18% Similarity=0.262 Sum_probs=129.8
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCe-EEEee-CCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecc
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPH-ISWKL-DGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQ 82 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 82 (258)
+...+....+.+|+++.|.|.+.+.+.+. +.|++ ++..+... .++ ....+++|.|.++
T Consensus 92 ~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~---~~~----------------~~~~~~~L~i~~v- 151 (289)
T 3ejj_X 92 WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRK---TVY----------------FFSPWRGFIIRKA- 151 (289)
T ss_dssp EEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTT---CCE----------------EEETTTEEEESSC-
T ss_pred eecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCC---ccE----------------EECCCCCEEEeec-
Confidence 45556778899999999999998866554 99986 56555432 111 2234567999999
Q ss_pred cCCCceEEEEEEEeCCcceeeceEEEEEe----cCCeecc-CCCcceecCCcEEEEeeeCc-ccCceEEEEeCCcccCCC
Q psy14532 83 KDHDRGVYWCTATNKQGRSSSQNVHISVT----GAPFVRP-MGNVSAIAGEPLYLGCPVAG-YPIESITWQKGVQQLPLN 156 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~----~~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~~i~W~~~~~~~~~~ 156 (258)
+..|+|.|+|.+.+......+..+.|.|. .+|.+.. +....+..|+.+.|.|.+.+ .|.+.+.|++++..+...
T Consensus 152 ~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~ 231 (289)
T 3ejj_X 152 KVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIP 231 (289)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCC
T ss_pred ccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeecc
Confidence 99999999999995444444477888887 3444333 44455678999999999988 788999999999877654
Q ss_pred cceE-----EecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 157 RRQK-----VFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 157 ~~~~-----~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
.... ....+.|.|.++.. +|+|.|+|.|.|..|. .+..+.|.+..++
T Consensus 232 ~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~-~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 232 LNSDFQDNYYKKVRALSLNAVDF-QDAGIYSCVASNDVGT-RTATMNFQVVESH 283 (289)
T ss_dssp EEEEECSSSEEEEEEEEESSCCS-SSCEEEEEEEECSSCE-EEEEEEEECC---
T ss_pred CCcccccceEEeeEEEEEEeecc-cCCEEEEEEEEcCCCC-ccccEEEEEEecc
Confidence 3222 12245799999997 9999999999999884 5566666665443
No 141
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.90 E-value=1.3e-23 Score=155.37 Aligned_cols=194 Identities=15% Similarity=0.214 Sum_probs=116.9
Q ss_pred Ccce-eeceeeeecCCCceEEEEEEeecCCCe-----EEEeeCCEeCcCCccccceecccceee----ccccccceeeee
Q psy14532 3 PQLI-YKFIQQTLQPGPPVSLKCIATGNPTPH-----ISWKLDGYPLAGDRHENKNRIGEARVQ----QLPLNRRQKVFP 72 (258)
Q Consensus 3 p~~~-~~~~~~~~~~g~~v~l~C~~~~~~~~~-----v~W~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 72 (258)
|.+. ..+..+.+.+|++++|.|.+.+.|.+. +.|+|++....... ..+........ ...+........
T Consensus 3 ~~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (248)
T 3pv7_A 3 LKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEV--KVFEFFGDHQEAFRPGAIVSPWRLKSG 80 (248)
T ss_dssp EEEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEE--EEEEEESSCEEESSTTCBCCHHHHTTT
T ss_pred eEEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcce--EEEEecCCcccccCCceEEEeccCCCC
Confidence 4443 456677899999999999998876654 99999643211100 00000000000 000000111123
Q ss_pred CCcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCc-ccCc-eEEEEeCC
Q psy14532 73 NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAG-YPIE-SITWQKGV 150 (258)
Q Consensus 73 ~~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~~~~ 150 (258)
+.+|.|.++ +.+|+|.|+|.+.+..+... ..+.|.|..+|.+.......+..|+.+.|.|.+.+ .|.+ .+.|++++
T Consensus 81 ~~sL~I~~v-~~~D~G~Y~C~~~~~~~~~~-~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g 158 (248)
T 3pv7_A 81 DASLRLPGI-QLEEAGEYRCEVVVTPLKAQ-GTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQT 158 (248)
T ss_dssp BCCEEESSC-CGGGCEEEEEEEEETTEEEE-EEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEEEEC
T ss_pred cEEEEeCCC-CHHHCeEEEEEEEeCCccce-eEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECC
Confidence 567999999 99999999999999876655 78889998887665544445567788889999988 7888 99999998
Q ss_pred cccCCCc---------ceEEecCC------eEEEEecccCCCCcEEEEEEEeCCCC-CccceEEEEe
Q psy14532 151 QQLPLNR---------RQKVFPNG------TLLIENVQKDHDRGVYWCTATNKQGR-SSSQNVHISV 201 (258)
Q Consensus 151 ~~~~~~~---------~~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~~-~~~~~~~l~v 201 (258)
..+.... ......++ .|.|..... +|.|.|+|.|.|..+. ..+..+.|.|
T Consensus 159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 159 QKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQE-DPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp SSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CC-CTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ccCCCccccccceeecccEECCCCCEEEEEEEEEcCccc-cCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 7553221 11112222 355666654 8899999999998764 2344555555
No 142
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.90 E-value=3.6e-22 Score=143.97 Aligned_cols=176 Identities=17% Similarity=0.238 Sum_probs=116.0
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCcEEEe
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLLIE 79 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~ 79 (258)
+.. |.++.+.+|++++|.|.+.+.+.+.+.|+|++ ..+... .... ......+..+.... .+.+|.|.
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~------~~~~-~~~~~~~~~r~~~~~~~~~~~L~I~ 75 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLL------IYKA-SNLASGVPARFSGSGSGTDFTLTID 75 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEE------EETT-TEECTTCCTTEEEEEETTEEEEEES
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEE------EEcc-ccccCCccccEEEEecCCEEEEEEC
Confidence 445 88899999999999999998888899999842 211000 0000 00000111121111 23479999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCc-ccCc-eEEEEeCCccc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAG-YPIE-SITWQKGVQQL 153 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~~~~~~~ 153 (258)
++ +.+|+|.|+|.+.+..+........|.|.. +|.+.. .....+..|+.+.|.|.+.+ .|.+ .+.|++++..+
T Consensus 76 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~ 154 (210)
T 1lk3_L 76 PV-EADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTER 154 (210)
T ss_dssp SC-CGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred CC-CHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccC
Confidence 99 999999999999987765443455677764 343332 23333447899999999987 4543 89999999877
Q ss_pred CCC-cc---eEEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 154 PLN-RR---QKVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 154 ~~~-~~---~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
... .. .....+ ..|.|.++.. +|+|.|+|.|.|...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 155 RDGVLDSVTDQDSKDSTYSMSSTLSLTKADY-ESHNLYTCEVVHKTS 200 (210)
T ss_dssp CTTEEEEECCCCTTTCCEEEEEEEEEEHHHH-HTCCEEEEEEECTTC
T ss_pred CCCceEccCCccCCCCCEEEEEEEEEChHHh-ccCCcEEEEEEecCC
Confidence 644 11 111122 2588999887 899999999999754
No 143
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.90 E-value=7.9e-22 Score=142.55 Aligned_cols=176 Identities=16% Similarity=0.213 Sum_probs=114.6
Q ss_pred eeeceeeeecCCCceEEEEEEeec-------CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeee-----eC
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGN-------PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVF-----PN 73 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~-------~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 73 (258)
...+..+.+.+|++|+|.|.+.+. +.+.+.|+|++........ .............+..|..+. .+
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 81 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEV--VATNNPDRRVKPETQGRFRLLGDVQKKN 81 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCB--SEESCTTSCBCTTTTTTEEECSCGGGTB
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccce--EecCCcccccCccccCceEEeccCCCCe
Confidence 345778889999999999998753 4678999997642110000 000000000011112222222 24
Q ss_pred CcEEEeecccCCCceEEEEEEEeCCccee---eceEEEEEecC---CeeccCCCcceecCCcEEEEeeeCcc----cCce
Q psy14532 74 GTLLIENVQKDHDRGVYWCTATNKQGRSS---SQNVHISVTGA---PFVRPMGNVSAIAGEPLYLGCPVAGY----PIES 143 (258)
Q Consensus 74 ~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~---~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~~ 143 (258)
.+|.|.++ +.+|+|.|.|.+.+..+... ...+.|.|... |.+..+. .+.+|+.+.|.|.+.+. |.+.
T Consensus 82 ~sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~--~~~~G~~v~L~C~~~~~~~~~p~p~ 158 (214)
T 2zg1_A 82 CSLSIGDA-RMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLE--PLESGRPTRLSCSLPGSCEAGPPLT 158 (214)
T ss_dssp CCEEECSC-CGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--C--CCCTTCCEEEEEECTTCCSCSSCCE
T ss_pred EEEEEccC-CHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCc--cccCCCeEEEEEEeccCCCCCCCce
Confidence 57999999 99999999999998753221 25677888764 3333222 36789999999999763 7889
Q ss_pred EEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 144 ITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 144 i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+.|++++....... ....+.|.|..+.. +|+|.|+|.|.|..+
T Consensus 159 v~W~~~~~~~~~~~---~~~~~~L~i~~~~~-~~~g~Y~C~a~n~~~ 201 (214)
T 2zg1_A 159 FSWTGNALSPLDPE---TTRSSELTLTPRPE-DHGTNLTCQMKRQGA 201 (214)
T ss_dssp EEEESSTTSSSCSS---CCCSSEEEECCCTT-CCSCEEEEEEECC--
T ss_pred EEEeCCCCccCCCC---ceeEEEEEEecccH-HcCcEEEEEEEeCCC
Confidence 99999886543221 13556789988875 899999999999753
No 144
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.90 E-value=4.6e-22 Score=140.43 Aligned_cols=161 Identities=23% Similarity=0.383 Sum_probs=115.5
Q ss_pred eeecCCCceEEEEEEeecCCC--eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceE
Q psy14532 12 QTLQPGPPVSLKCIATGNPTP--HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGV 89 (258)
Q Consensus 12 ~~~~~g~~v~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~ 89 (258)
..+.+|++++|.|.+.+.+.+ .+.|+|++..+....... ....|.|. +..|+|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~---------------------~~~~l~i~---~~~d~G~ 63 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG---------------------QKTEFKVD---SDDQWGE 63 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC---------------------SEEEEEEC---GGGCCEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC---------------------CcEEEEEe---chhhCeE
Confidence 457899999999999886666 899999998775441000 01234343 4779999
Q ss_pred EEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeeeCccc-CceEEEEe---CCcc-cCC--CcceEE
Q psy14532 90 YWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGYP-IESITWQK---GVQQ-LPL--NRRQKV 161 (258)
Q Consensus 90 Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~-~~~i~W~~---~~~~-~~~--~~~~~~ 161 (258)
|+|.+.+.. . ..+.|.|..+|.+.. .....+.+|+.+.|.|.+.+.| .+.+.|++ ++.. +.. ..++.+
T Consensus 64 Y~C~~~n~~---~-~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~ 139 (184)
T 3b5h_A 64 YSCVFLPEP---M-GTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFV 139 (184)
T ss_dssp EEEEEESTT---S-CEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEE
T ss_pred EEEEEECCc---C-cEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEE
Confidence 999999722 2 566788887765443 3445688899999999999988 79999999 4433 321 133444
Q ss_pred ecCC---eEEEEecc-cCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 162 FPNG---TLLIENVQ-KDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 162 ~~~~---~l~i~~~~-~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
..++ .|.|.++. . +|.|.|+|.|.|..+. ....+.|.|.
T Consensus 140 ~~~~~~~~L~i~~v~~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~ 182 (184)
T 3b5h_A 140 SSSQGRSELHIENLNME-ADPGQYRCNGTSSKGS-DQAIITLRVR 182 (184)
T ss_dssp EEETTEEEEEECSCCTT-TSSEEEEEEEEETTEE-EEEEEEEEEC
T ss_pred EecCCeeEEEEeecccc-ccCceEEEEEEeCCCc-ceEEEEEEEe
Confidence 3333 79999998 7 9999999999999874 4445666664
No 145
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.90 E-value=5.9e-22 Score=143.15 Aligned_cols=181 Identities=15% Similarity=0.178 Sum_probs=118.4
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeee---eCCcEEEe
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLLIE 79 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~ 79 (258)
|.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|.+..... ................+.... .+.+|.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~-----~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 76 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAP-----KLLIYYTNKLADGVPSRFSGSGSGRDSSFTIS 76 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCC-----EEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCc-----EEEEEEcCcCCCCCCCcEEEeccCCEEEEEEC
Confidence 6677778899999999999999999888889999984210000 000000000001111121111 34479999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEE---ecCCeecc-CCCcceecCCcEEEEeeeCcccC--ceEEEEeCCccc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISV---TGAPFVRP-MGNVSAIAGEPLYLGCPVAGYPI--ESITWQKGVQQL 153 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v---~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~--~~i~W~~~~~~~ 153 (258)
++ +.+|+|.|+|.+.+..+........|.| ..+|.+.. .....+..|+.+.|.|.+.+.++ +.+.|++++..+
T Consensus 77 ~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l 155 (213)
T 3r06_A 77 SL-ESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEK 155 (213)
T ss_dssp SC-CGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CC-CcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCccc
Confidence 99 9999999999999876544445667777 33343332 33444556888999999987554 489999999877
Q ss_pred CCCc--ce--EEecCC------eEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 154 PLNR--RQ--KVFPNG------TLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 154 ~~~~--~~--~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.... .. ....++ .|.|..... +|+|.|+|.|.|...
T Consensus 156 ~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~-~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 156 RDGVLQSVTDQDSKDSTYSLSSTLSLTKADY-ERHNLYTCEVTHKTS 201 (213)
T ss_dssp CTTEEEEECCCCTTTCCEEEEEEEEEEHHHH-HTCCEEEEEEEETTC
T ss_pred CCceEeccCceeCCCCcEEEEEEEEeCHHHh-ccCCeEEEEEEeccc
Confidence 6431 11 111222 466777766 789999999999753
No 146
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.89 E-value=4.1e-22 Score=148.45 Aligned_cols=165 Identities=20% Similarity=0.367 Sum_probs=125.7
Q ss_pred ceeeceeeeecCCCceEEEEEE-eecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeeccc
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIA-TGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
+...+....+.+|+.+.|.|.+ .+.+.+.+.|++++..+... ..++.|.|.++ +
T Consensus 85 ~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~------------------------~~~~~l~i~~~-~ 139 (262)
T 3rjd_A 85 LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF------------------------HWNSNLTILKT-N 139 (262)
T ss_dssp EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE------------------------EECCCEEESSC-C
T ss_pred eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc------------------------CCCCeEEEEEC-C
Confidence 3445556778899999999999 56677899999998775322 12568999999 9
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccC-c----eEEEEeCCcccCC
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPI-E----SITWQKGVQQLPL 155 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~----~i~W~~~~~~~~~ 155 (258)
..|+|.|+|.+.+..+... ..+.|.|.. ++.+.......+..|+.+.|.|.+.+.|. + .+.|++++..+..
T Consensus 140 ~~d~G~Y~C~~~n~~~~~~-~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~ 218 (262)
T 3rjd_A 140 ISHNGTYHCSGMGKHRYTS-AGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG 218 (262)
T ss_dssp GGGCEEEEEEEESSSEEEE-ECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE
T ss_pred hhhCEEEEEEEeCCCCccc-cceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc
Confidence 9999999999999886554 777888874 34444445667889999999999998764 4 4789998886642
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCc--cceEEEEe
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSS--SQNVHISV 201 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~--~~~~~l~v 201 (258)
......|.|.++.. +|+|.|+|.|.|..|... +..+.|.|
T Consensus 219 -----~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~G~~~~~s~~~~l~V 260 (262)
T 3rjd_A 219 -----RNTSSEYQILTARR-EDSGLYWCEAATEDGNVLKRSPELELQV 260 (262)
T ss_dssp -----EESCCEEEESSCCG-GGCEEEEEEEEETTSSCEEECCCEEECE
T ss_pred -----cCCCceEEEEEech-hhCeEEEEEEEcccCceEEecCCeEEEE
Confidence 13556899999997 999999999999988533 34444444
No 147
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.89 E-value=2.1e-22 Score=143.26 Aligned_cols=172 Identities=17% Similarity=0.150 Sum_probs=114.1
Q ss_pred eceeeeecCCCceEEEEEEee-cCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCC
Q psy14532 8 KFIQQTLQPGPPVSLKCIATG-NPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHD 86 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 86 (258)
.|..+.+.+|++|+|.|.+.+ .+.+.+.|++++..+......... ..........+..|..+..+++|.|.++ +..|
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~R~~~~~~~sL~I~~v-~~~D 81 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETK-SPEIHVTNPKQGKRLNFTQSYSLQLSNL-KMED 81 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSS-CCEEEECCHHHHTTEEECTTCCEEECSC-CGGG
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCC-CCceeecCccccccEEECCCeEEEECCC-Cccc
Confidence 466788999999999999875 455699999987654311000000 0000001112223444446789999999 9999
Q ss_pred ceEEEEEEEeCCcceeeceEEEEEecCCe---eccCCCcceecCC-cEEEEeeeCcc-cCceEEEEeCCcccCCCcceEE
Q psy14532 87 RGVYWCTATNKQGRSSSQNVHISVTGAPF---VRPMGNVSAIAGE-PLYLGCPVAGY-PIESITWQKGVQQLPLNRRQKV 161 (258)
Q Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~---~~~~~~~~~~~g~-~~~l~C~~~~~-~~~~i~W~~~~~~~~~~~~~~~ 161 (258)
+|.|+|.+.+..+... ..+.|.|..++. +.... .....|. .+.|.|.+.+. |.+.+.|++++..+.
T Consensus 82 ~G~Y~C~~~~~~~~~~-~~~~L~V~~~~~~p~i~~~~-~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~------- 152 (193)
T 2if7_A 82 TGSYRAQISTKTSAKL-SSYTLRILRQLRNIQVTNHS-QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLS------- 152 (193)
T ss_dssp CEEEEEEEECSSCEEE-EEEEEEEECCCEEEEEEECC-C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEE-------
T ss_pred CceEEEEEEecCCCeE-EEEEEEEEccCCCCeEecCc-eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcC-------
Confidence 9999999999877655 577888876542 11111 1223454 79999999884 578999999887542
Q ss_pred ecCCeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 162 FPNGTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 162 ~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
....|.|.....+.|.|.|+|.|.|..+.
T Consensus 153 -~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~ 181 (193)
T 2if7_A 153 -SQPNLTVSWDPRISSEQDYTCIAENAVSN 181 (193)
T ss_dssp -SSSEEEEEECTTTCSCCEEEEEEEETTEE
T ss_pred -CCCeEEEEeccCcCCCCcEEEEEECCCCc
Confidence 33456675444423899999999998874
No 148
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.89 E-value=6.4e-22 Score=148.62 Aligned_cols=194 Identities=16% Similarity=0.230 Sum_probs=121.9
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeee---CCcEEEe
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP---NGTLLIE 79 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~ 79 (258)
+.+...+.++.+.+|++|+|.|.+.+.+.+.+.|+|++..... ........ ........+..... +.+|.|.
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~----~~~~~~~~-~~~~~~~~r~~~~~~~~~~~L~I~ 87 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAP----KLLIYSAS-FLYSGVPSRFSGSGSGTDFTLTIS 87 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCC----EEEEETTT-EECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCC----EEEEEEcC-ccCCCCCCCEEEeccCCeEEEEEc
Confidence 4567778889999999999999999888889999985321000 00000000 00001111222221 2379999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEecCC---------------eeccCCCcceecCCcEEEEeeeCccc--Cc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP---------------FVRPMGNVSAIAGEPLYLGCPVAGYP--IE 142 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~---------------~~~~~~~~~~~~g~~~~l~C~~~~~~--~~ 142 (258)
++ +.+|+|.|+|.+.+..+........|.|...+ .+..+....+.+|+.+.|.|.+.+.+ .+
T Consensus 88 ~v-~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~ 166 (276)
T 3auv_A 88 SL-QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDY 166 (276)
T ss_dssp SC-CGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGS
T ss_pred cC-ChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCC
Confidence 99 99999999999998755433244566665432 12224456788999999999998765 58
Q ss_pred eEEEEeCC--ccc-----------------CCCcceEEecC-----CeEEEEecccCCCCcEEEEEEEeCC----CCCcc
Q psy14532 143 SITWQKGV--QQL-----------------PLNRRQKVFPN-----GTLLIENVQKDHDRGVYWCTATNKQ----GRSSS 194 (258)
Q Consensus 143 ~i~W~~~~--~~~-----------------~~~~~~~~~~~-----~~l~i~~~~~~~~~g~y~C~~~~~~----~~~~~ 194 (258)
.+.|++++ ... ....++.+..+ .+|.|.++.. +|+|.|+|.+.|.. .....
T Consensus 167 ~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~n~~~~~~~~~fg 245 (276)
T 3auv_A 167 WIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRA-EDTAVYYCARFVFFLPYAMDYWG 245 (276)
T ss_dssp EEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG-GGCEEEEEEEECSSTTCSCCCBC
T ss_pred EEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCCh-hHCEEEEEEEEcCcCCcCceEEC
Confidence 99999963 211 01223333322 2799999997 99999999999972 21223
Q ss_pred ceEEEEeec
Q psy14532 195 QNVHISVTV 203 (258)
Q Consensus 195 ~~~~l~v~~ 203 (258)
....|.|..
T Consensus 246 ~gt~l~V~~ 254 (276)
T 3auv_A 246 QGTLVTVSS 254 (276)
T ss_dssp CCEEEEEC-
T ss_pred CCEEEEEcc
Confidence 345566654
No 149
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.89 E-value=4.9e-22 Score=147.66 Aligned_cols=194 Identities=13% Similarity=0.219 Sum_probs=120.0
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCcccccee-cccceeeccccccceeeee-----CCcE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNR-IGEARVQQLPLNRRQKVFP-----NGTL 76 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~l 76 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. ..+... .... ..........+..|..+.. ..+|
T Consensus 7 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 83 (256)
T 3umt_A 7 QQSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWI---GGINPNNGGTSYNQKFKGKAILTVDKSSSTAYL 83 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEE---EEECTTTCCEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred EccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEE---EEEeccCCcccccccccceEEEEEecCCCEEEE
Confidence 345567799999999999998755 5789999842 111000 0000 0000111111223333332 2349
Q ss_pred EEeecccCCCceEEEEEEEeCC---cceeeceEEEEEec----------------CCeec-cCCCcceecCCcEEEEeee
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQ---GRSSSQNVHISVTG----------------APFVR-PMGNVSAIAGEPLYLGCPV 136 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~---~~~~~~~~~l~v~~----------------~~~~~-~~~~~~~~~g~~~~l~C~~ 136 (258)
.|.++ +.+|+|.|.|.+.+.. .........|.|.. ++.+. .+....+.+|+.++|.|.+
T Consensus 84 ~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~ 162 (256)
T 3umt_A 84 ELRSL-TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRA 162 (256)
T ss_dssp EECSC-CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEE
T ss_pred EECCC-CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEE
Confidence 99999 9999999999998872 12222556777774 22222 2444678899999999999
Q ss_pred CcccCceEEEEeCC--cccC------------CCcceEEec---CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEE
Q psy14532 137 AGYPIESITWQKGV--QQLP------------LNRRQKVFP---NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHI 199 (258)
Q Consensus 137 ~~~~~~~i~W~~~~--~~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 199 (258)
.+.+.+.+.|+++. .... ...++.... ..+|.|.++.. +|+|.|+|.+.+...........|
T Consensus 163 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~~~~~~~~fg~gt~L 241 (256)
T 3umt_A 163 SQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLES-EDFVDYYCLQYASSPPTFGGGTKL 241 (256)
T ss_dssp SSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCG-GGCSEEEEEECSSSSCEECCCEEE
T ss_pred ecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCCh-hHCEEEEEEEeeCCCcEECCCEEE
Confidence 98887899999842 2111 112222221 22599999997 999999999998654334455667
Q ss_pred EeecCC
Q psy14532 200 SVTVPP 205 (258)
Q Consensus 200 ~v~~~p 205 (258)
.|..++
T Consensus 242 ~V~~~~ 247 (256)
T 3umt_A 242 EIKRAA 247 (256)
T ss_dssp EEC---
T ss_pred EEECCC
Confidence 776544
No 150
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=1.3e-21 Score=144.51 Aligned_cols=191 Identities=18% Similarity=0.245 Sum_probs=118.6
Q ss_pred eceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcEEE
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLLI 78 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i 78 (258)
.+.++.+.+|++|+|.|.+.+.+ .+.+.|+|+. ....... ..............+..+..+.. ..+|.|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (247)
T 2ghw_B 8 QSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVA--VISYDGSNKYYADSVKGRFTISRDNSKNTLYLQM 85 (247)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEE--EECTTSSCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred ecCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEE--EEecCCCceeeCccccCcEEEEEeCCCCEEEEEE
Confidence 44668899999999999998876 5789999842 1110000 00000000000111122222222 246999
Q ss_pred eecccCCCceEEEEEEEeCCcc-eeeceEEEEEecCC---------------eec-cCCCcceecCCcEEEEeeeCcccC
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGR-SSSQNVHISVTGAP---------------FVR-PMGNVSAIAGEPLYLGCPVAGYPI 141 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~---------------~~~-~~~~~~~~~g~~~~l~C~~~~~~~ 141 (258)
.++ +.+|+|.|+|.+.+..+. .......|.|...+ .+. .+....+.+|+.+.|.|.+.+.+.
T Consensus 86 ~~v-~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~ 164 (247)
T 2ghw_B 86 NSL-RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVR 164 (247)
T ss_dssp CSC-CGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCT
T ss_pred CcC-CHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCcc
Confidence 999 999999999999987322 12245577776542 121 234456889999999999999888
Q ss_pred ceEEEEe--CCcccC------------CCcceEEec---CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 142 ESITWQK--GVQQLP------------LNRRQKVFP---NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 142 ~~i~W~~--~~~~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
+.+.|++ ++..+. ...++.+.. ..+|.|.++.. +|+|.|+|.+.+...........|.|.
T Consensus 165 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 165 SNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEP-EDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCG-GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCH-HHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 8999999 444331 112332221 23599999997 999999999998543233344455554
No 151
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.89 E-value=1.1e-21 Score=145.79 Aligned_cols=193 Identities=17% Similarity=0.232 Sum_probs=119.9
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeC--CEeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|+ +..+..- ..............+..|..+.. +.+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~---~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 81 (257)
T 1f3r_B 5 LESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWM---GRMWYDGYTAYNSALKSRLSISRDTSKNQVFLK 81 (257)
T ss_dssp EEECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEE---EEECSSSCEEECSSSSTTEEEEEETTTTEEEEE
T ss_pred ECCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEE---EEEecCCceeeCcccCCcEEEEEECCCCEEEEE
Confidence 345567899999999999998874 679999985 2211000 00000000000111122222222 34799
Q ss_pred EeecccCCCceEEEEEEEeCCc-------c-eeeceEEEEEecCC---------------eec-cCCCcceecCCcEEEE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG-------R-SSSQNVHISVTGAP---------------FVR-PMGNVSAIAGEPLYLG 133 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~-------~-~~~~~~~l~v~~~~---------------~~~-~~~~~~~~~g~~~~l~ 133 (258)
|.++ +.+|+|.|+|.+.+..+ . .......|.|...+ .+. .+....+.+|+.++|.
T Consensus 82 I~~v-~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~ 160 (257)
T 1f3r_B 82 MNSL-QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLS 160 (257)
T ss_dssp EESC-CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEE
T ss_pred ECCC-CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEE
Confidence 9999 99999999999998743 1 12245577777543 111 2334567899999999
Q ss_pred eeeCcccCceEEEEe--CCcccC------------CCcceEEe---cCCeEEEEecccCCCCcEEEEEEEeCCCCCccce
Q psy14532 134 CPVAGYPIESITWQK--GVQQLP------------LNRRQKVF---PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQN 196 (258)
Q Consensus 134 C~~~~~~~~~i~W~~--~~~~~~------------~~~~~~~~---~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~ 196 (258)
|.+.+.+.+.+.|++ ++..+. ...++.+. ...+|.|.++.. +|+|.|+|.+.|.. ......
T Consensus 161 C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~-~~~g~g 238 (257)
T 1f3r_B 161 CKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQP-EDVATYFCYQYNNG-YTFGAG 238 (257)
T ss_dssp EECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCG-GGCSEEEEEEESSS-EEECCC
T ss_pred EEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCCh-hhCEEEEEEEeCCC-CeECCC
Confidence 999988878999999 454331 01223221 223699999997 99999999999864 122233
Q ss_pred EEEEeecCC
Q psy14532 197 VHISVTVPP 205 (258)
Q Consensus 197 ~~l~v~~~p 205 (258)
..|.|...+
T Consensus 239 t~l~V~~~~ 247 (257)
T 1f3r_B 239 TKLELKAAE 247 (257)
T ss_dssp CEECCSSSC
T ss_pred EEEEEeCCC
Confidence 445554433
No 152
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.89 E-value=3.5e-22 Score=144.83 Aligned_cols=182 Identities=14% Similarity=0.203 Sum_probs=114.6
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec-CCCeEEEeeCC--EeCcCCccccceecccceeeccccccceee---eeCCcE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN-PTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKV---FPNGTL 76 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l 76 (258)
|.+...+ .+.+.+|++|+|.|.+.+. +.+.+.|+|.. ...... ..............+..+... ..+.+|
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L 77 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYV---MELKKDGSHSTGDGIPDRFSGSSSGADRYL 77 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEE---EEECTTSCEEECSSCCTTEEEEEETTEEEE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEE---EEEcccCccccCCCcccceEEecCCceEEE
Confidence 5666677 8899999999999999988 88999999832 111000 000000000011111112221 124569
Q ss_pred EEeecccCCCceEEEEEEEeCCc----ceeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCc-ccCc-eEE
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQG----RSSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAG-YPIE-SIT 145 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~-~i~ 145 (258)
.|.++ +.+|+|.|+|.+.+..+ ......+.|.|.. +|.+.. ........|+.+.|.|.+.+ .|.+ .+.
T Consensus 78 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~ 156 (218)
T 3s96_B 78 SISNI-QPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVA 156 (218)
T ss_dssp EESSC-CGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEccC-CcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEE
Confidence 99999 99999999999998765 2223566788874 333322 33444556789999999988 5666 899
Q ss_pred EEeCCcccCCCcce--EEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 146 WQKGVQQLPLNRRQ--KVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 146 W~~~~~~~~~~~~~--~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
|++++..+...... ....+ ..|.|..... +|.|.|+|.|.|..+
T Consensus 157 W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~-~d~g~Y~C~a~n~~~ 208 (218)
T 3s96_B 157 WKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQW-RSHNSFTCQVTHEGD 208 (218)
T ss_dssp EEETTEEC--------------CEEEEEEEEEEHHHH-HTCSCEEEEEEETTE
T ss_pred EEECCEECcCceecCcccccCCcEEEEEEEEEeHHHc-cCCCeEEEEEEeCCC
Confidence 99999877542111 00112 2366777766 789999999999764
No 153
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.89 E-value=1.2e-21 Score=144.97 Aligned_cols=178 Identities=17% Similarity=0.259 Sum_probs=116.2
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeee---eCCcEEEe
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLLIE 79 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~ 79 (258)
+.+...+..+.+.+|++|+|.|.+.+.+.+.+.|+|...... ....+............+.... .+.+|.|.
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~-----~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 79 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGT-----VKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTIS 79 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSC-----EEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCC-----CEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEc
Confidence 456667788889999999999999998888999998531000 0000000000001111111111 23379999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEecC--------------------CeeccCCCcceecCCcEEEEeeeCcc
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA--------------------PFVRPMGNVSAIAGEPLYLGCPVAGY 139 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~--------------------~~~~~~~~~~~~~g~~~~l~C~~~~~ 139 (258)
++ +.+|+|.|.|.+.+..+........|.|..+ +.+..+....+.+|+.+.|.|.+.+.
T Consensus 80 ~v-~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 158 (250)
T 3esu_F 80 NL-EQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGY 158 (250)
T ss_dssp SC-CGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCST
T ss_pred cC-ChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCC
Confidence 99 9999999999999876554435556777643 12233455678899999999999876
Q ss_pred c--CceEEEEeC--CcccCC-----------------CcceEEecC-----CeEEEEecccCCCCcEEEEEEEe
Q psy14532 140 P--IESITWQKG--VQQLPL-----------------NRRQKVFPN-----GTLLIENVQKDHDRGVYWCTATN 187 (258)
Q Consensus 140 ~--~~~i~W~~~--~~~~~~-----------------~~~~~~~~~-----~~l~i~~~~~~~~~g~y~C~~~~ 187 (258)
+ .+.+.|+++ +..+.. ..++.+..+ .+|.|.++.. +|+|.|+|.+.+
T Consensus 159 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~~ 231 (250)
T 3esu_F 159 AFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTS-VDSAVYFCARSG 231 (250)
T ss_dssp TGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCG-GGCEEEEEEEEC
T ss_pred cccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCc-ccCEEEEEEEec
Confidence 5 789999997 433211 123333222 2699999998 999999999997
No 154
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.89 E-value=5.4e-22 Score=144.23 Aligned_cols=195 Identities=14% Similarity=0.158 Sum_probs=121.2
Q ss_pred eeceeeeecCCCceEEEEEEeecCCC---eEEEeeCCEeCcCC-ccccceecc-----cceeecc-ccccceeeeeCCcE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNPTP---HISWKLDGYPLAGD-RHENKNRIG-----EARVQQL-PLNRRQKVFPNGTL 76 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~~~---~v~W~~~~~~~~~~-~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~l 76 (258)
..|.++.+.+|++|+|.|.+.+.+.+ .|.|+|++..+... ......... ..+.... ..........+++|
T Consensus 6 ~vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL 85 (225)
T 4fmk_A 6 RVLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATL 85 (225)
T ss_dssp ECCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCE
T ss_pred EeCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEE
Confidence 34566788999999999999876555 48999975432110 000000000 0000000 00011122346789
Q ss_pred EEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc-CCCcceecCCcEEEEeee-CcccCceEEEEeCCcccC
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP-MGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQLP 154 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~~ 154 (258)
.|.++ +.+|+|.|+|.+.+..+........+.+..++.... ........++.+.+.|.+ .+.|++.+.|++++....
T Consensus 86 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~ 164 (225)
T 4fmk_A 86 AFRGL-RVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEA 164 (225)
T ss_dssp EECSC-CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEE
T ss_pred EEccC-CHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCcccc
Confidence 99999 999999999999987766554555666665553332 334445566777777766 457888999999876554
Q ss_pred CCcceEEecC------CeEEEEecccCCCCcEEEEEEEeCCCCC-ccceEEEEeec
Q psy14532 155 LNRRQKVFPN------GTLLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHISVTV 203 (258)
Q Consensus 155 ~~~~~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~~ 203 (258)
.........+ +.|.|.++.. +|+|.|+|.|.|..+.. .+..+.|.|.+
T Consensus 165 ~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 165 KDTQEPGIQAGTVTIISRYSLVPVGR-ADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp EEEEEECSSTTCEEEEEEEEECCCGG-GTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred CCcceEEecCCCEEEEEEEEEeeCCH-HHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 3322222222 2588888887 99999999999987643 34455565554
No 155
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.89 E-value=1.3e-21 Score=145.26 Aligned_cols=180 Identities=16% Similarity=0.203 Sum_probs=117.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecC-----CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNP-----TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF--- 71 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~-----~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 71 (258)
+|.+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+... ... .......+..+....
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~------~~~-~~~~~~~~~~r~~~~~~~ 110 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRL------IYL-VSKLDSGDPDRFTGSGSG 110 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEE------EET-TTEECTTCCTTEEEEEET
T ss_pred ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEE------EEe-ccccCCCccceEEEecCC
Confidence 45677778889999999999999998876 4899999842 221100 000 000000111122222
Q ss_pred eCCcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCcc-cC-ceEE
Q psy14532 72 PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAGY-PI-ESIT 145 (258)
Q Consensus 72 ~~~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~i~ 145 (258)
.+.+|.|.++ +.+|+|.|+|.+.+..+........|.|.. +|.+.. ........|+.+.|.|.+.+. |+ +.+.
T Consensus 111 ~~~~L~I~~v-~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 189 (254)
T 2c1o_A 111 TDFTLKISRV-EAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVK 189 (254)
T ss_dssp TEEEEEESSC-CGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred CEEEEEECcC-CcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEE
Confidence 2237999999 999999999999987654433445666653 333332 233334468899999999884 44 4699
Q ss_pred EEeCCcccCCC--cceE--------EecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 146 WQKGVQQLPLN--RRQK--------VFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 146 W~~~~~~~~~~--~~~~--------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
|++++..+... .... ....+.|.|.++.. +|+|.|+|.|.|...
T Consensus 190 W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~ 243 (254)
T 2c1o_A 190 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEY-ERHNSYTCEATHKTS 243 (254)
T ss_dssp EEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHH-HTCCEEEEEEECTTC
T ss_pred EEECCCcccCcceeccccccCCCCcEEEEEEEEeccccc-cCCCeEEEEEEcCCC
Confidence 99999877654 1111 11124688999987 999999999999764
No 156
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.89 E-value=1.5e-21 Score=143.29 Aligned_cols=179 Identities=17% Similarity=0.209 Sum_probs=116.9
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceee---eeCCcEE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKV---FPNGTLL 77 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~ 77 (258)
+.+...+.++.+.+|++++|.|.+.+.+.+.+.|+|.+ ..... ..............+... ..+.+|.
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~-------~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 97 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKL-------LIYSASFLYSGVPSRFSGSGSGTDFTLT 97 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEE-------EEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEE-------EEEeccccCCCCCCcEEEEcCCCEEEEE
Confidence 45566678889999999999999998888899999842 11100 000000000011111111 1345799
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCc-cc-CceEEEEeCCc
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAG-YP-IESITWQKGVQ 151 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~-~~~i~W~~~~~ 151 (258)
|.++ +.+|+|.|+|.+.+..+........|.|.. +|.+.. .....+..|+.+.|.|.+.+ .| .+.+.|++++.
T Consensus 98 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~ 176 (237)
T 3sob_L 98 ISSL-QPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNA 176 (237)
T ss_dssp ESSC-CGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECCC-ChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCC
Confidence 9999 999999999999887654433555677643 333322 33334456888999999987 44 57999999998
Q ss_pred ccCCCc----ceEEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 152 QLPLNR----RQKVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 152 ~~~~~~----~~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.+.... ......+ ..|.|..... +|+|.|+|.|.|...
T Consensus 177 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~ 224 (237)
T 3sob_L 177 LQSGNSQESVTEQDSKDSTYSLSSTLTLSKADY-EKHKVYACEVTHQGL 224 (237)
T ss_dssp ECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHH-TTCCEEEEEEECTTC
T ss_pred CCCCceeecccccccCCCcEEEEEEEEEcHHHc-cCCCcEEEEEeeCCC
Confidence 776431 1111122 3477777776 899999999999864
No 157
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.89 E-value=1.6e-21 Score=144.90 Aligned_cols=195 Identities=15% Similarity=0.248 Sum_probs=122.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCcccccee-cccceeeccccccceeeee----
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNR-IGEARVQQLPLNRRQKVFP---- 72 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---- 72 (258)
+|.+...+.++.+.+|++|+|.|.+.+. +.+.+.|+|.. .....- .... ..........+..|..+..
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 82 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWM---GWINPYNGNKEFSAKFQDRVTFTADTSA 82 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEE---EEEETTTTEEEECTTTTTTEEEEEETTT
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEE---EEEEcCCCcEeecccCcceEEEEEecCC
Confidence 4667888899999999999999999873 56789999842 111000 0000 0000011112223333332
Q ss_pred -CCcEEEeecccCCCceEEEEEEEeC-----------CcceeeceEEEEEecCC----------------eeccCCCcce
Q psy14532 73 -NGTLLIENVQKDHDRGVYWCTATNK-----------QGRSSSQNVHISVTGAP----------------FVRPMGNVSA 124 (258)
Q Consensus 73 -~~~l~i~~~~~~~d~G~Y~C~~~~~-----------~~~~~~~~~~l~v~~~~----------------~~~~~~~~~~ 124 (258)
..+|.|.++ +.+|+|.|.|.+.+. ..........|.|...+ ....+....+
T Consensus 83 ~~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (256)
T 3juy_B 83 NTAYMELRSL-RSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSL 161 (256)
T ss_dssp TEEEEEECSC-CGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEE
T ss_pred CEEEEEECCC-CcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEE
Confidence 235999999 999999999999986 12222355677887632 2223555678
Q ss_pred ecCCcEEEEeeeCcccC-ceEEEEeC--CcccC------------CCcceEEec---CCeEEEEecccCCCCcEEEEEEE
Q psy14532 125 IAGEPLYLGCPVAGYPI-ESITWQKG--VQQLP------------LNRRQKVFP---NGTLLIENVQKDHDRGVYWCTAT 186 (258)
Q Consensus 125 ~~g~~~~l~C~~~~~~~-~~i~W~~~--~~~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~ 186 (258)
.+|++++|.|.+.+.+. +.+.|++. +.... ...++.+.. ..+|.|.++.. +|+|.|+|.+.
T Consensus 162 ~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~ 240 (256)
T 3juy_B 162 SPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEP-EDFALYYCQVY 240 (256)
T ss_dssp CTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCSEEEEEEC
T ss_pred eCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCH-hHCEEEEEEEe
Confidence 89999999999988765 89999983 22221 112222222 22599999997 99999999998
Q ss_pred eCCCCCccceEEEEe
Q psy14532 187 NKQGRSSSQNVHISV 201 (258)
Q Consensus 187 ~~~~~~~~~~~~l~v 201 (258)
+...........|.|
T Consensus 241 ~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 241 GASSYTFGQGTKLER 255 (256)
T ss_dssp CSSCCEECCCEEEEE
T ss_pred eCCCceEcCCEEEEE
Confidence 854322333344443
No 158
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.88 E-value=4.7e-23 Score=157.24 Aligned_cols=180 Identities=18% Similarity=0.199 Sum_probs=127.0
Q ss_pred eeceeeeecCCCceEEEEEE-eecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCC
Q psy14532 7 YKFIQQTLQPGPPVSLKCIA-TGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDH 85 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 85 (258)
..+.......|+.+.|.|.+ .+.|.+.+.|++++..+..... .... ........|.|.++ ...
T Consensus 119 ~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~---~~~~------------~~~~~~s~l~i~~~-~~~ 182 (308)
T 4fom_A 119 KGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTT---SFPN------------ETATIISQYKLFPT-RFA 182 (308)
T ss_dssp ECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEE---ECTT------------SCEEEEEEEEECCC-GGG
T ss_pred cccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccc---eeee------------ecccccccceEEee-eec
Confidence 34455666789999999975 5688999999999876643310 0000 01112346889999 999
Q ss_pred CceEEEEEEEeCCccee-eceEEEEEecCCeecc--CCCcceecCCcEEEEeeeCcccCc-eEEEEeCCcccCCCcceEE
Q psy14532 86 DRGVYWCTATNKQGRSS-SQNVHISVTGAPFVRP--MGNVSAIAGEPLYLGCPVAGYPIE-SITWQKGVQQLPLNRRQKV 161 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~~~-~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~-~i~W~~~~~~~~~~~~~~~ 161 (258)
|.|.|+|.+.+..+... ...+.|.|..+|.+.. .....+..|+.+.|.|.+.|.|.+ .+.|++++..+.... ..
T Consensus 183 d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~--~~ 260 (308)
T 4fom_A 183 RGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGL--LA 260 (308)
T ss_dssp TTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSC--BC
T ss_pred CCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcE--EE
Confidence 99999999999765433 2455666665554332 334456678999999999999887 799999988775432 12
Q ss_pred ecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 162 FPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 162 ~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
..+..|.|.++.. +|+|.|+|.|.|..|. .+..+.|.|..+|.
T Consensus 261 ~~~~~l~i~~v~~-~d~G~Y~C~A~N~~G~-~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 261 SDNTLHFVHPLTF-NYSGVYICKVTNSLGQ-RSDQKVIYISDPPH 303 (308)
T ss_dssp STTEEECCSCCCS-CCCSEEEEEEEETTEE-EEEEEECCEECCC-
T ss_pred cCCeEEEECCCCh-hhCEEEEEEEEeCCCc-EEEEEEEEEEcCCC
Confidence 2233455667886 9999999999999884 56778888888875
No 159
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.88 E-value=1.5e-21 Score=144.90 Aligned_cols=194 Identities=16% Similarity=0.251 Sum_probs=123.2
Q ss_pred eeeceeeeecCCCceEEEEEEeecC--CCeEEEeeC--CEeCcCCccccceecccceeeccccccceeeee-----CCcE
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTL 76 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l 76 (258)
...+.++.+.+|++|+|.|.+.+.+ .+.+.|+|+ +..+..-.... ..+........+..|..+.. +.+|
T Consensus 4 l~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~--~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 81 (256)
T 1nqb_A 4 LQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRID--PNSGGTKYNEKFKSKATLTVDKPSSTAYM 81 (256)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEEC--TTTCCEEECGGGTTTEEEEEETTTTEEEE
T ss_pred EECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEe--cCCCceeeCcccCCeEEEEEecCCCEEEE
Confidence 4566778899999999999998764 569999984 22110000000 00000000111122222222 3479
Q ss_pred EEeecccCCCceEEEEEEEeCCcc----eeeceEEEEEecCCeec-cCCCcceecCCcEEEEeeeCcccCc-----eEEE
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGR----SSSQNVHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGYPIE-----SITW 146 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~-----~i~W 146 (258)
.|.++ +.+|+|.|+|.+.+..+. .....+.|.|...+.+. .+....+.+|+.++|.|.+.+.+.+ .+.|
T Consensus 82 ~I~~v-~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W 160 (256)
T 1nqb_A 82 QLSSL-TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEW 160 (256)
T ss_dssp EECSC-CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEE
T ss_pred EECcC-ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEE
Confidence 99999 999999999999987542 22245678887665443 3445678899999999999887754 9999
Q ss_pred Ee--CCcccC------------CCcceEEe---cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 147 QK--GVQQLP------------LNRRQKVF---PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 147 ~~--~~~~~~------------~~~~~~~~---~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
++ ++..+. ...++... ...+|.|.++.. +|+|.|+|.+.+...........|.|..
T Consensus 161 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 161 YLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA-EDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCCh-HHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 99 454331 01222221 223699999997 9999999999885432334455666654
No 160
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.88 E-value=4.8e-22 Score=142.33 Aligned_cols=172 Identities=13% Similarity=0.170 Sum_probs=112.4
Q ss_pred eeeecCCCceEEEEEEee----cCCCeEEEeeCCEeCcCCccccceecccceeecccccccee--eeeCCcEEEeecccC
Q psy14532 11 QQTLQPGPPVSLKCIATG----NPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQK--VFPNGTLLIENVQKD 84 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~~~~----~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~ 84 (258)
.+.+.+|++|+|.|.+.+ .+.+.+.|++++..+....... ......+..|.. ...+++|.|.++ +.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~-------~~~~~~~~~r~~~~~~~~~~L~I~~v-~~ 74 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGD-------MNIWPEYKNRTIFDITNNLSIVILAL-RP 74 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTE-------EEECHHHHTTEEEESTTTTEEEECSC-CG
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCc-------eeecCcccceeEEccCCCcEEEEecc-cc
Confidence 467889999999999853 3567899999987653221100 001111112221 123568999999 99
Q ss_pred CCceEEEEEEEeCCccee----eceEEEEEecCCeeccCCCcceecCCcEEEEeeeC-cccCceEEEEeCCcccCCCcce
Q psy14532 85 HDRGVYWCTATNKQGRSS----SQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVA-GYPIESITWQKGVQQLPLNRRQ 159 (258)
Q Consensus 85 ~d~G~Y~C~~~~~~~~~~----~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~i~W~~~~~~~~~~~~~ 159 (258)
+|+|.|+|.+.+..+... ...+.|.|..++............|+.+.|.|.+. +.|.|.+.|++++..+......
T Consensus 75 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~ 154 (201)
T 1dr9_A 75 SDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTT 154 (201)
T ss_dssp GGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEE
T ss_pred hhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccce
Confidence 999999999999765432 35677777765321111111123578899999994 8899999999999877644322
Q ss_pred E-EecC-CeEE---EEecccCCCCcEEEEEEEeCCCC
Q psy14532 160 K-VFPN-GTLL---IENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 160 ~-~~~~-~~l~---i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
. .... +.+. +..+.. .|.|.|+|.|.|..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~v~~-~d~g~Y~C~a~n~~~~ 190 (201)
T 1dr9_A 155 VSQDPETELYAVSSKLDFNM-TTNHSFMCLIKYGHLR 190 (201)
T ss_dssp EEECTTTCCEEEEEEEEEET-TSCEEEEEEEEETTCC
T ss_pred EEecCCCcEEEEEEEEEEEe-cCCCEEEEEEecCcce
Confidence 2 2223 3322 234555 8999999999998773
No 161
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=5.2e-21 Score=155.56 Aligned_cols=235 Identities=22% Similarity=0.320 Sum_probs=136.9
Q ss_pred eeceeeeecCCCceEEEEEEeecCC----CeEEEeeC--CEeCcCCccccceecccceeeccccccceeee-----eCCc
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNPT----PHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVF-----PNGT 75 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~~----~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 75 (258)
..+..+.+.+|++++|.|.+.+.+. ..+.|||. +.....- ..............+..|..+. .+.+
T Consensus 5 ~qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l---~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 81 (512)
T 1zvo_C 5 QESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWI---GGVYYTGSIYYNPSLRGRVTISVDTSRNQFS 81 (512)
T ss_pred ECCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEE---EEEecCCCEEECCccCCceEEEecCCCCEEE
Confidence 3467788999999999999986432 67999985 2211100 0000000000111122232222 1357
Q ss_pred EEEeecccCCCceEEEEEEEeCCc-----------c-eeeceEEEEEec----CCeeccCCC--cceecCCcEEEEeeeC
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQG-----------R-SSSQNVHISVTG----APFVRPMGN--VSAIAGEPLYLGCPVA 137 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~-----------~-~~~~~~~l~v~~----~~~~~~~~~--~~~~~g~~~~l~C~~~ 137 (258)
|.|.++ +.+|+|.|.|.+.+..+ . .......|.|.. +|.+..... .....++.+.|.|.+.
T Consensus 82 L~I~~v-~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~ 160 (512)
T 1zvo_C 82 LNLRSM-SAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLIT 160 (512)
T ss_pred EEECcC-CHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEE
Confidence 999999 99999999999987642 1 112445677763 232221111 1022468999999998
Q ss_pred cc-cCc-eEEEEeCCcccCCC-cceEEecC------CeEEEEecccCCCCcEEEEEEEeCCCCCccc----------eEE
Q psy14532 138 GY-PIE-SITWQKGVQQLPLN-RRQKVFPN------GTLLIENVQKDHDRGVYWCTATNKQGRSSSQ----------NVH 198 (258)
Q Consensus 138 ~~-~~~-~i~W~~~~~~~~~~-~~~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~----------~~~ 198 (258)
+. |.+ .++|++++...... .......+ ..|.|..... + .|.|+|.|.|..+..... .+.
T Consensus 161 g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~ 238 (512)
T 1zvo_C 161 GYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQW-R-QGEYKCVVQHTASKSKKEIFRWPESPKAQAS 238 (512)
T ss_pred eeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHc-C-CceEEEEEEeCCCCceEEEecCCCCCCcCCE
Confidence 85 655 89999965432110 00011112 2477776665 5 899999999987642211 112
Q ss_pred EEeecCC----------------------------------------------------ccccC-CCCCccCCCCeeeEE
Q psy14532 199 ISVTVPP----------------------------------------------------KIAPF-EFQPDLHSGDRAGVQ 225 (258)
Q Consensus 199 l~v~~~p----------------------------------------------------~~~~~-~~~~~~~~g~~~~l~ 225 (258)
+.+..+| .+... +....+..|+.++|.
T Consensus 239 v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~ 318 (512)
T 1zvo_C 239 SVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFT 318 (512)
T ss_pred EEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEE
Confidence 3333232 21111 222345679999999
Q ss_pred EEeccCCCC-ceeEEEECCEecc
Q psy14532 226 CLVTKGDPP-LTISWLKNGLPIL 247 (258)
Q Consensus 226 C~~~~~~p~-~~~~W~~~g~~l~ 247 (258)
|.+.+.+|+ ..|.|+++|+.+.
T Consensus 319 C~v~g~~P~~~~i~W~k~g~~~~ 341 (512)
T 1zvo_C 319 CFVVGSDLKDAHLTWEVAGKVPT 341 (512)
T ss_pred EEEeceECCCeEEEEEECCEecc
Confidence 999644553 5999999999876
No 162
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.88 E-value=9.4e-23 Score=158.25 Aligned_cols=172 Identities=19% Similarity=0.304 Sum_probs=99.6
Q ss_pred ceeeeecCCCceEEEEEE-----eecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeeccc
Q psy14532 9 FIQQTLQPGPPVSLKCIA-----TGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~-----~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
+....+.+|+.+.|.|.+ .+.|.+.+.|+|++..+... .. .......|.|.++ +
T Consensus 127 ~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~---~~-----------------~~~~~~~L~i~~v-~ 185 (349)
T 4dep_C 127 PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF---NN-----------------VIPEGMNLSFLIA-L 185 (349)
T ss_dssp CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC---SS-----------------EEEETTEEEEESC-C
T ss_pred CcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc---cc-----------------eeecCCEEEEeee-e
Confidence 446678899999999974 66788999999999877432 11 1112356999999 9
Q ss_pred CCCceEEEEEEEeCC-cce--eeceEEEEEec------CCeeccCCC-c--ceecCCcEEEEeeeC----cccCceEEEE
Q psy14532 84 DHDRGVYWCTATNKQ-GRS--SSQNVHISVTG------APFVRPMGN-V--SAIAGEPLYLGCPVA----GYPIESITWQ 147 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~-~~~--~~~~~~l~v~~------~~~~~~~~~-~--~~~~g~~~~l~C~~~----~~~~~~i~W~ 147 (258)
.+|+|.|+|.+.+.. +.. .+..+.|.|.. +|.+..+.. . .+..|+.+.|.|.+. +.|.+.+.|+
T Consensus 186 ~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~ 265 (349)
T 4dep_C 186 ISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWT 265 (349)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEE
T ss_pred ecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEE
Confidence 999999999999976 443 24777787765 344333221 1 678899999999998 5688999999
Q ss_pred eCCcccCC-CcceEE------------ecCCeEEEEecccCCCC-cEEEEEEEeCCCCCccceEEEEeec
Q psy14532 148 KGVQQLPL-NRRQKV------------FPNGTLLIENVQKDHDR-GVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 148 ~~~~~~~~-~~~~~~------------~~~~~l~i~~~~~~~~~-g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
+++..+.. ..+... .....|.|.++.. +|. |.|+|.|.|..|. ....+.|.|..
T Consensus 266 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~~G~Y~C~a~N~~G~-~~~~~~l~v~~ 333 (349)
T 4dep_C 266 IDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTS-EDLKRSYVCHARSAKGE-VAKAAKVKQKV 333 (349)
T ss_dssp SSCC--------CCCCEEEECCTTCCEEEEECC--------------CEEEEECSSCE-EEEECC-----
T ss_pred ECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccH-HHcCCcEEEEEEcCCCc-EEEEEEEeeec
Confidence 99887654 221111 0123489999997 999 9999999999884 44455566644
No 163
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.88 E-value=6.3e-22 Score=149.78 Aligned_cols=178 Identities=19% Similarity=0.234 Sum_probs=127.5
Q ss_pred eeeceeeeecCCCceEEEEEEeecCC-CeEEEeeC-CEeCcCCccccceecccceeeccccccceeeeeCCcEEEeeccc
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNPT-PHISWKLD-GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~~-~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
...+.+..+.+|++++|.|.+.+... +.+.|+++ +..+... .+. ....++.|.|.++ +
T Consensus 93 ~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~---~~~----------------~~~~~~~L~i~~~-~ 152 (292)
T 4dkd_C 93 NVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRH---TNY----------------SFSPWHGFTIHRA-K 152 (292)
T ss_dssp EESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSS---CCE----------------ECCSSSCCEETTC-C
T ss_pred cccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccC---Ccc----------------cccCCceEEECCC-C
Confidence 45566788999999999999987322 68999987 4444322 111 1123456999999 9
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcccC-ceEEEEeCCcccCCCc
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGYPI-ESITWQKGVQQLPLNR 157 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~-~~i~W~~~~~~~~~~~ 157 (258)
..|+|.|+|.+.+..+...+..+.|.|.. +|.+.. +....+..|+.+.|.|.+.+.|. ..+.|++++..+....
T Consensus 153 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~ 232 (292)
T 4dkd_C 153 FIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQ 232 (292)
T ss_dssp GGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCB
T ss_pred HHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCc
Confidence 99999999999988776655688888886 554433 44455679999999999987654 5788888887665443
Q ss_pred ceEEe-----cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 158 RQKVF-----PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 158 ~~~~~-----~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
..... ..+.|.|.++.. +|+|.|+|.|.|..+. .+..+.|.|....
T Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~g~-~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 233 QSDFHNNRYQKVLTLNLDQVDF-QHAGNYSCVASNVQGK-HSTSMFFRVVESA 283 (292)
T ss_dssp EEEEETTEEEEEEEEEESSCCT-TSCEEEEEEEECSSCE-EEEEEEECC----
T ss_pred cceeccceeeeEEEEEECccCh-hcCeEEEEEEecCCCC-ceeEEEEEEeeCC
Confidence 32222 224799999997 9999999999999884 5566777766543
No 164
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.88 E-value=2.8e-21 Score=142.40 Aligned_cols=177 Identities=19% Similarity=0.250 Sum_probs=115.6
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCcEE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLL 77 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 77 (258)
+.+...+.++.+.+|++|+|.|.+.+.+.+.+.|+|+. ...... .... .. ....+..|.... .+.+|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~-----~~~~-~~-~~~~~~~r~~~~~~~~~~~L~ 74 (242)
T 2znx_A 2 IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLL-----IKYA-SQ-SISGIPSRFSGSGSGTDFTLS 74 (242)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEE-----EETT-TE-ECTTSCTTEEEEEETTEEEEE
T ss_pred CcEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEE-----EEec-cc-cCCCCCCCEEEecCCCEEEEE
Confidence 45777888899999999999999998888899999853 111000 0000 00 000111122211 234799
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEecCC--------------eeccCCCcceecCCcEEEEeeeCccc--C
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP--------------FVRPMGNVSAIAGEPLYLGCPVAGYP--I 141 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~--------------~~~~~~~~~~~~g~~~~l~C~~~~~~--~ 141 (258)
|.++ +.+|+|.|.|.+.+..+........|.|..++ .+..+....+.+|++++|.|.+.+.+ .
T Consensus 75 I~~v-~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~ 153 (242)
T 2znx_A 75 INSV-ETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITS 153 (242)
T ss_dssp ESSC-CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGG
T ss_pred ECCC-ChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCC
Confidence 9999 99999999999998754333345567776543 12223345688999999999998764 5
Q ss_pred ceEEEEeCC--cccC----------------CCcceEEec-----CCeEEEEecccCCCCcEEEEEEEeC
Q psy14532 142 ESITWQKGV--QQLP----------------LNRRQKVFP-----NGTLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 142 ~~i~W~~~~--~~~~----------------~~~~~~~~~-----~~~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
+.+.|+++. ..+. ...++.+.. ..+|.|.++.. +|+|.|+|.+.+.
T Consensus 154 ~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 154 DYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT-EDTATYYCANXDG 222 (242)
T ss_dssp SCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCG-GGCEEEEEEETTS
T ss_pred cceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCc-CcCEEEEEeccCC
Confidence 789999853 2221 122333321 13799999998 9999999999874
No 165
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.88 E-value=6.6e-22 Score=152.33 Aligned_cols=177 Identities=19% Similarity=0.247 Sum_probs=128.3
Q ss_pred eceeeeecCC---CceEEEEE-EeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeeccc
Q psy14532 8 KFIQQTLQPG---PPVSLKCI-ATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 8 ~~~~~~~~~g---~~v~l~C~-~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
.+....+.+| +.++|.|. ..+.|.+.+.|++++...... ...... .........|.|.++ .
T Consensus 138 ~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~---~~~~~~-----------~~~~~~~~~L~i~~~-~ 202 (331)
T 3u83_A 138 TQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEY---QEIRNP-----------NGTVTVISRYRLVPS-R 202 (331)
T ss_dssp CSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEE---EEEECT-----------TSCEEEEEEEEECCC-G
T ss_pred CCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcccc---ceeECC-----------CCcEEEEEEEEEEec-c
Confidence 4455667888 77999997 778899999999953211100 000000 011112346888888 8
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEecCCeec--cCCCcceecCCcEEEEeeeCcccCce-EEEEeCCcccCCCcceE
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR--PMGNVSAIAGEPLYLGCPVAGYPIES-ITWQKGVQQLPLNRRQK 160 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~-i~W~~~~~~~~~~~~~~ 160 (258)
..|+|.|+|.+.+..+... ..+.|.|..+|.+. ......+..|+.+.|.|.+.+.|.+. +.|++++..+....
T Consensus 203 ~~d~G~Y~C~a~n~~~~~~-~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--- 278 (331)
T 3u83_A 203 EAHQQSLACIVNYHMDRFK-ESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV--- 278 (331)
T ss_dssp GGTTCEEEEEEEETTEEEE-EEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---
T ss_pred ccCCCEEEEEEecCCCcce-eeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc---
Confidence 9999999999999887655 77788887666443 23445578899999999999999887 99999998876542
Q ss_pred EecCCeEEEE-ecccCCCCcEEEEEEEeCCCCCccceEEEEeecCC
Q psy14532 161 VFPNGTLLIE-NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPP 205 (258)
Q Consensus 161 ~~~~~~l~i~-~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p 205 (258)
...+++|.|. ++.. +|.|.|+|.|.|..|. .+..+.|.|...+
T Consensus 279 ~~~~~~L~i~~~v~~-~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~~ 322 (331)
T 3u83_A 279 EAQNRTLFFKGPINY-SLAGTYICEATNPIGT-RSGQVEVNITEAA 322 (331)
T ss_dssp EEETTEEEECSCCCG-GGCEEEEEEEEETTEE-EEEEEEECCBC--
T ss_pred eecCcEEEEeCCCcc-ccCeEEEEEEEecccc-ceEEEEEEEeccc
Confidence 2356789999 8987 9999999999999884 4677777777654
No 166
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.88 E-value=1.4e-21 Score=149.62 Aligned_cols=182 Identities=18% Similarity=0.219 Sum_probs=116.1
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.+...+... +.+|++++|.|.+. .+.+.+.|+|++..+.......... .....+.|.|.++
T Consensus 119 ~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~---------------~~~~~~~L~i~~v 181 (316)
T 3vh8_G 119 KPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIH---------------DGVSKANFSIGPM 181 (316)
T ss_dssp CCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEE---------------TTEEEEEEEECSC
T ss_pred CCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeec---------------CCCceEEEEECCC
Confidence 34555554443 78999999999985 4566899999987654321000000 0113457999999
Q ss_pred ccCCCceEEEEEEEeCCcce----eeceEEEEEec---CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC
Q psy14532 82 QKDHDRGVYWCTATNKQGRS----SSQNVHISVTG---APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP 154 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~ 154 (258)
+.+|+|.|+|.+.+..+.. .+..+.|.|.. +|.+.......+.+|+.++|.|.+.. +.+.+.|++++..+.
T Consensus 182 -~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~ 259 (316)
T 3vh8_G 182 -MLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRS-SYDMYHLSREGGAHE 259 (316)
T ss_dssp -CGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESS-CCSEEEEEETTSSCC
T ss_pred -ChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCC-CCcEEEEEECCCcCC
Confidence 9999999999999976631 13566777753 33333333346789999999999974 678999999998765
Q ss_pred CCcceEEecC----CeEEEEecccCCCCcEEEEEEEeCCCC----CccceEEEEeecCC
Q psy14532 155 LNRRQKVFPN----GTLLIENVQKDHDRGVYWCTATNKQGR----SSSQNVHISVTVPP 205 (258)
Q Consensus 155 ~~~~~~~~~~----~~l~i~~~~~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~~~p 205 (258)
.......... ..|.|.+++ |+|.|+|.+.|..+. ..+..+.|.|..+|
T Consensus 260 ~~~~~~~~~~~~~~~~L~i~~v~---D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 260 RRLPAVRKVNRTFQADFPLGPAT---HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp EEEECEECTTSCEEEEEECC--------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred CceeceeccCCceeEEEEcCCcC---CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 4322211111 468887775 999999999997542 45677777776655
No 167
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.88 E-value=3.9e-21 Score=141.39 Aligned_cols=177 Identities=18% Similarity=0.291 Sum_probs=117.2
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecC----CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eC
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNP----TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PN 73 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~----~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 73 (258)
..+...+.++.+.+|++|+|.|.+.+.+ .+.+.|+|+. ..+........ ........+..+. .+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~-------~~~~~~~~r~~~~~~~~~ 74 (240)
T 1moe_A 2 IVLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRAS-------NLESGIPVRFSGTGSRTD 74 (240)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTT-------EECTTCCTTEEEEEETTE
T ss_pred CceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEec-------ccCcCCCccEEEEecCCe
Confidence 3567788889999999999999998877 6789999852 21110000000 0000011121111 12
Q ss_pred CcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCC-------eeccCCCcceecCCcEEEEeeeCccc--CceE
Q psy14532 74 GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP-------FVRPMGNVSAIAGEPLYLGCPVAGYP--IESI 144 (258)
Q Consensus 74 ~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~-------~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~i 144 (258)
.+|.|.++ +.+|+|.|+|.+.+..+........|.|...+ .+..+....+.+|+.+.|.|.+.+.| .+.+
T Consensus 75 ~~L~I~~v-~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v 153 (240)
T 1moe_A 75 FTLIIDPV-EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYM 153 (240)
T ss_dssp EEEEESSC-CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCE
T ss_pred EEEEEcCC-ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEE
Confidence 37999999 99999999999998765433355677776542 22234556788999999999998866 4699
Q ss_pred EEEeCC--cccC-----------------CCcceEEecC-----CeEEEEecccCCCCcEEEEEEEeC
Q psy14532 145 TWQKGV--QQLP-----------------LNRRQKVFPN-----GTLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 145 ~W~~~~--~~~~-----------------~~~~~~~~~~-----~~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
.|+++. .... ...++.+..+ .+|.|.++.. +|+|.|+|.|.+.
T Consensus 154 ~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 154 HWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTS-EDTAVYYCAPFGY 220 (240)
T ss_dssp EEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG-GGCEEEEEEECST
T ss_pred EEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCH-HHCEEEEEEEEec
Confidence 999952 2221 1123333221 3699999998 9999999999853
No 168
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.88 E-value=2.4e-21 Score=143.63 Aligned_cols=179 Identities=16% Similarity=0.206 Sum_probs=116.0
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecC-----CCeEEEeeCCE--eCcCCccccceecccceeeccccccceeee---e
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNP-----TPHISWKLDGY--PLAGDRHENKNRIGEARVQQLPLNRRQKVF---P 72 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~-----~~~v~W~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 72 (258)
+.+...+..+.+.+|++|+|.|.+.+.+ .+.+.|+|++. .... ..... ......+..|.... .
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~------~~~~~-~~~~~~~~~r~~~~~~~~ 107 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKL------LIYQV-STRFSGVPDRFSGSGSGT 107 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEE------EEETT-TEECTTCCTTEEEEEETT
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEE------EEEcC-CcccCCcCCceEEEccCC
Confidence 4456668888999999999999998876 57999998641 1100 00000 00001111222222 2
Q ss_pred CCcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eEEE
Q psy14532 73 NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SITW 146 (258)
Q Consensus 73 ~~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W 146 (258)
+.+|.|.++ +.+|+|.|+|.+.+..+........|.|.. +|.+.. .....+..|+.++|.|.+.+. |.+ .+.|
T Consensus 108 ~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 186 (252)
T 3bkj_L 108 DFTLRISRV-EAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKW 186 (252)
T ss_dssp EEEEEESSC-CGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEEECCC-CcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEE
Confidence 237999999 999999999999887654333445677754 233332 233334478999999999884 443 7999
Q ss_pred EeCCcccCCC-cc---eEEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 147 QKGVQQLPLN-RR---QKVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 147 ~~~~~~~~~~-~~---~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
++++..+... .. .....+ ..|.|.++.. +|+|.|+|.|.|...
T Consensus 187 ~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~ 239 (252)
T 3bkj_L 187 KIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEY-ERHNSYTCEATHKTS 239 (252)
T ss_dssp EETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHH-HHCCEEEEEEECTTC
T ss_pred EECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhc-cCCCeEEEEEEeCCC
Confidence 9999876544 11 111122 2488888887 899999999999754
No 169
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.88 E-value=1.4e-21 Score=141.01 Aligned_cols=177 Identities=15% Similarity=0.218 Sum_probs=114.2
Q ss_pred cceeeceeeeecCCCceEEEEEEeecC---CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCc
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNP---TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGT 75 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~---~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 75 (258)
.+.. +.++.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+..- ..... .....+..+.... .+.+
T Consensus 3 ~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~------~~~~~-~~~~~~~~r~~~~~~~~~~~ 74 (212)
T 1q0x_L 3 VVTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGL------IGGTN-NRAPGVPARFSGSLIGDKAA 74 (212)
T ss_dssp CEEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEE------EETTT-EECTTCCTTEEEEEETTEEE
T ss_pred eEEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEE------EEcCc-ccCCcccccEEEEeeCCEEE
Confidence 3455 8888999999999999998876 3789999852 221000 00000 0000111121111 2347
Q ss_pred EEEeecccCCCceEEEEEEEeCCcceeeceEEEEEe----cCCeecc-CCCcceecCCcEEEEeeeCccc-Cc-eEEEEe
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT----GAPFVRP-MGNVSAIAGEPLYLGCPVAGYP-IE-SITWQK 148 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~----~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~-~~-~i~W~~ 148 (258)
|.|.++ +.+|+|.|+|.+.+..+........|.|. .+|.+.. .....+..|+.+.|.|.+.+.+ ++ .+.|++
T Consensus 75 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 153 (212)
T 1q0x_L 75 LTITGA-QTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKV 153 (212)
T ss_dssp EEESSC-CGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEECCC-CccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEE
Confidence 999999 99999999999998765433355567774 2333332 2333345688999999998854 33 899999
Q ss_pred CCcccCCCcce---EEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 149 GVQQLPLNRRQ---KVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 149 ~~~~~~~~~~~---~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
++..+...... ....+ ..|.|.++.. +|.|.|+|.|.|...
T Consensus 154 ~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 154 DGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAW-ERHSSYSCQVTHEGH 203 (212)
T ss_dssp TTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHH-TTCCEEEEEEEETTE
T ss_pred CCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHc-cCCCcEEEEEEeCCc
Confidence 99877543211 11122 2578888877 899999999999753
No 170
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.88 E-value=5.6e-21 Score=142.01 Aligned_cols=194 Identities=17% Similarity=0.239 Sum_probs=119.2
Q ss_pred eeeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcE
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTL 76 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l 76 (258)
+..+.++.+.+|++|+|.|.+.+. +.+.+.|+|.. ...... ..............+..+..+.. ..+|
T Consensus 12 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 88 (257)
T 3gkz_A 12 LQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYM---GYISYRGSTYYNPSLKSRISITRDTSKNQVYL 88 (257)
T ss_dssp EEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEE---EEEETTCCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred EECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEE---EEEecCCcEEecccccccEEEEEecCCceEEE
Confidence 456677889999999999999884 46799999842 110000 00000001111112223333332 2369
Q ss_pred EEeecccCCCceEEEEEEEeCCc---ceeeceEEEEEecC--------------Ceec-cCCCcceecCCcEEEEeeeCc
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQG---RSSSQNVHISVTGA--------------PFVR-PMGNVSAIAGEPLYLGCPVAG 138 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~---~~~~~~~~l~v~~~--------------~~~~-~~~~~~~~~g~~~~l~C~~~~ 138 (258)
.|.++ +.+|+|.|+|.+.+..+ ........|.|..+ +.+. .+....+.+|++++|.|.+.+
T Consensus 89 ~I~~v-~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 167 (257)
T 3gkz_A 89 QLKSV-SSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASS 167 (257)
T ss_dssp EECSC-CGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESS
T ss_pred EECCC-ChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEcc
Confidence 99999 99999999999998621 11224566777654 2222 234467889999999999988
Q ss_pred ccCc-eEEEEeC--CcccCC------------CcceEEe---cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEE
Q psy14532 139 YPIE-SITWQKG--VQQLPL------------NRRQKVF---PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHIS 200 (258)
Q Consensus 139 ~~~~-~i~W~~~--~~~~~~------------~~~~~~~---~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~ 200 (258)
.+.+ .+.|+++ +..... ..++... ...+|.|.++.. +|+|.|+|.+.+........-..|.
T Consensus 168 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~~~~~~~~fg~gt~l~ 246 (257)
T 3gkz_A 168 SVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEA-EDAASYFCHQWSSFPFTFGSGTKLE 246 (257)
T ss_dssp CCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEECSSSSCEECCCEEEE
T ss_pred CccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCCh-HHCEEEEEEEccCCceEEcCCEEEE
Confidence 7766 8999984 222210 1222221 123599999997 9999999999875432233444566
Q ss_pred eecC
Q psy14532 201 VTVP 204 (258)
Q Consensus 201 v~~~ 204 (258)
|...
T Consensus 247 v~~~ 250 (257)
T 3gkz_A 247 IKRA 250 (257)
T ss_dssp ECCC
T ss_pred EEeC
Confidence 5543
No 171
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=1.7e-20 Score=152.61 Aligned_cols=215 Identities=15% Similarity=0.190 Sum_probs=129.6
Q ss_pred CCCceEEEEEEeec-CCC-eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEEEEE
Q psy14532 16 PGPPVSLKCIATGN-PTP-HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCT 93 (258)
Q Consensus 16 ~g~~v~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~ 93 (258)
.|+.+.|.|.+.+. |.+ .|.|++++...... ........ .. .......|.|... ... .|.|+|.
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~-~~~~~~~~---------~g--~~~~~s~L~i~~~-~~~-~g~ytC~ 214 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQSQPQR-TFPEIQRR---------DS--YYMTSSQLSTPLQ-QWR-QGEYKCV 214 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCcccCceE-ecCceecC---------CC--CEEEEEEEEEcHH-HcC-CceEEEE
Confidence 46899999999886 665 89999964321100 00000000 00 0111235778777 666 8999999
Q ss_pred EEeCCcceeeceE-----------EEEEecC-------------------------------------------------
Q psy14532 94 ATNKQGRSSSQNV-----------HISVTGA------------------------------------------------- 113 (258)
Q Consensus 94 ~~~~~~~~~~~~~-----------~l~v~~~------------------------------------------------- 113 (258)
+.+..+... ... .+.+..+
T Consensus 215 v~n~~~~~~-~~~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 293 (512)
T 1zvo_C 215 VQHTASKSK-KEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSH 293 (512)
T ss_pred EEeCCCCce-EEEecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCC
Confidence 999876543 211 2333211
Q ss_pred ---Cee--ccCCCcceecCCcEEEEeeeCcc-c-CceEEEEeCCcccCCCc---ceEEecC------CeEEEEecccCCC
Q psy14532 114 ---PFV--RPMGNVSAIAGEPLYLGCPVAGY-P-IESITWQKGVQQLPLNR---RQKVFPN------GTLLIENVQKDHD 177 (258)
Q Consensus 114 ---~~~--~~~~~~~~~~g~~~~l~C~~~~~-~-~~~i~W~~~~~~~~~~~---~~~~~~~------~~l~i~~~~~~~~ 177 (258)
|.+ ..+....+..|+.+.|.|.+.+. | ...|+|++++..+.... ......+ +.|.|..... +|
T Consensus 294 ~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~-~d 372 (512)
T 1zvo_C 294 TQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLW-NA 372 (512)
T ss_pred CCCCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHh-cC
Confidence 111 11222335579999999999885 4 24999999987754111 1111123 2478877776 89
Q ss_pred CcEEEEEEEeCCCCCccceEEEEe----ecCCccccCCCCCccCCCCeee-EEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 178 RGVYWCTATNKQGRSSSQNVHISV----TVPPKIAPFEFQPDLHSGDRAG-VQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 178 ~g~y~C~~~~~~~~~~~~~~~l~v----~~~p~~~~~~~~~~~~~g~~~~-l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
.|.|+|.|.|..+......+.... ..+|.+...+... .|+.+. |.|.+.+.+|+ ..+.|++||+.+..+
T Consensus 373 ~g~y~C~a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~ 447 (512)
T 1zvo_C 373 GTSVTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTS 447 (512)
T ss_pred CCeEEEEEEeCCCCCCceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCc
Confidence 999999999987533222222111 2345444332221 789999 99999644555 579999999999765
No 172
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.87 E-value=3.3e-22 Score=144.29 Aligned_cols=176 Identities=16% Similarity=0.248 Sum_probs=115.0
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCccccceecccceeecccccccee---eeeCCcEE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQK---VFPNGTLL 77 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 77 (258)
|.+...+ .+.+.+|++|+|.|.+. +.+.+.|+|+ +...... .............+.. ...+.+|.
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~-------~~~~~~~~~~~~~r~~~~~~~~~~~L~ 71 (211)
T 3tv3_L 2 SALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLV-------IYDVNKRPSGVPDRFSGSKSGNTASLT 71 (211)
T ss_dssp -CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEE-------EBTTTBCCTTSCTTEEEEEETTEEEEE
T ss_pred ceEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEE-------EEEecccCCCCcCcEEEEccCCEEEEE
Confidence 4555666 88899999999999988 7889999984 2211100 0000000000111111 12345799
Q ss_pred EeecccCCCceEEEEEEEeCCc-ceeeceEEEEEe----cCCeecc-CCCcceecCCcEEEEeeeCccc--CceEEEEeC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG-RSSSQNVHISVT----GAPFVRP-MGNVSAIAGEPLYLGCPVAGYP--IESITWQKG 149 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~----~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~ 149 (258)
|.++ +.+|+|.|+|.+.+..+ ......+.|.|. .+|.+.. +....+..|+.+.|.|.+.+.+ .+.+.|+++
T Consensus 72 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~ 150 (211)
T 3tv3_L 72 VSGL-QTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKAD 150 (211)
T ss_dssp EESC-CGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEET
T ss_pred ECCC-ChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEEC
Confidence 9999 99999999999999876 333366778887 3443332 3334444799999999998853 579999999
Q ss_pred CcccCCCcc---eEEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 150 VQQLPLNRR---QKVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 150 ~~~~~~~~~---~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+..+..... .....+ ..|.|.++.. +|.|.|+|.|.|..+
T Consensus 151 g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~Y~C~v~~~~~ 199 (211)
T 3tv3_L 151 SSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQW-KSHRSYSCQVTHEGS 199 (211)
T ss_dssp TEEECTTEEECCCEECTTSSEEEEEEEEECHHHH-HHSSCEEEEEEETTE
T ss_pred CeecCCCcccCCceECCCCCEEEEEEEEEcHHHh-CCCCeEEEEEEECCC
Confidence 987754211 111122 3477777776 789999999999764
No 173
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.87 E-value=4.2e-21 Score=141.03 Aligned_cols=179 Identities=19% Similarity=0.295 Sum_probs=114.5
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCccccceecccceeeccccccceeee----eCCcEE
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVF----PNGTLL 77 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~ 77 (258)
.+.+.+.++.+.+|++|+|.|. .+.+.+.+.|+|+ +.....- . ............+..+..+. ...+|.
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~---~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 76 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLI---H-YSYGAGSTEKGDIPDGYKASRPSQENFSLI 76 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEE---E-EESSTTCCEECSSCTTCEEECCSSSBCEEE
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEE---E-EEecCcceeCCCccceEEEEccCCceEEEE
Confidence 4667788899999999999999 6778889999995 2111000 0 00000000000111122111 245799
Q ss_pred EeecccCCCceEEEEEEEeCCcc----eeeceEEEEEecCCe------------e-ccCCCcceecCCcEEEEeeeCccc
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGR----SSSQNVHISVTGAPF------------V-RPMGNVSAIAGEPLYLGCPVAGYP 140 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~~~~------------~-~~~~~~~~~~g~~~~l~C~~~~~~ 140 (258)
|.++ +.+|+|.|+|.+.+..+. .......|.|...+. + ..+....+.+|+.+.|.|.+.+.|
T Consensus 77 I~~v-~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p 155 (238)
T 2p1y_A 77 LELA-TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSA 155 (238)
T ss_dssp ESSC-CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTT
T ss_pred EecC-CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCC
Confidence 9999 999999999999987542 112445677765431 2 224456788999999999999988
Q ss_pred CceEEEEeCCc--ccC------------CCcceEEec-----CCeEEEEecccCCCCcEEEEEEEeCC
Q psy14532 141 IESITWQKGVQ--QLP------------LNRRQKVFP-----NGTLLIENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 141 ~~~i~W~~~~~--~~~------------~~~~~~~~~-----~~~l~i~~~~~~~~~g~y~C~~~~~~ 189 (258)
.+.+.|++++. ... ...++.+.. ..+|.|.++.. +|+|.|+|.+.|..
T Consensus 156 ~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 156 FDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP-GDSATYFCAAIDTN 222 (238)
T ss_dssp CCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCG-GGCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCH-HHCEEEEEEEeeCC
Confidence 89999999642 110 112233221 24799999997 99999999999873
No 174
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.87 E-value=1.1e-21 Score=146.77 Aligned_cols=215 Identities=15% Similarity=0.144 Sum_probs=106.3
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCC-eEEEeeC--CEeC-cCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTP-HISWKLD--GYPL-AGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~v~W~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+...|.+..+.+|+++.|+|.+.. +.+ .+.|... ...+ ..+ ..-..+.|.+
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~g------------------------~~~~~~~l~~ 56 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPG------------------------NNRKVYELSN 56 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCSC------------------------SSEEEEEEES
T ss_pred eEEeCCccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccccCC------------------------CceEEEEEEe
Confidence 456778889999999999999864 444 4888642 1111 000 0011367777
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc--CCCcceecCCcEEEEeeeCc-ccCc--eEEEEeCCcccCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP--MGNVSAIAGEPLYLGCPVAG-YPIE--SITWQKGVQQLPL 155 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~-~~~~--~i~W~~~~~~~~~ 155 (258)
+ +. .|.|+|.+.... ......+.|.|+.+|.... .....+.+|+.++|.|.+.+ .|.. .|+|++++..+..
T Consensus 57 v-~~--~~~y~C~~~~~~-~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~ 132 (291)
T 1mq8_A 57 V-QE--DSQPMCYSNCPD-GQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKR 132 (291)
T ss_dssp C-CS--CCCCEEEEECSS-CEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEE
T ss_pred c-cc--CCeEEEEEEcCC-ccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeec
Confidence 7 53 357999997543 3444777889987764322 22244788999999999977 4544 6899999977653
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCC-------CccceEEEEeecCCcccc-CCCCCccCCCCeeeEEEE
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGR-------SSSQNVHISVTVPPKIAP-FEFQPDLHSGDRAGVQCL 227 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~-------~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~ 227 (258)
..........++.+... ++++++.|+|+|.+..+. ..+....|.|.++|.... ......+.+|+.++|.|.
T Consensus 133 ~~~~~~~~~~~l~~~~~-~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~ 211 (291)
T 1mq8_A 133 EPAVGEPAEVTTTVLVR-RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCS 211 (291)
T ss_dssp EECCBTTEEEEEECCCS-SSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC---------------------------
T ss_pred ccCCCCCceEEEEeeee-eccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEE
Confidence 32110011123444444 336667999999987542 235677888888764322 121235788999999999
Q ss_pred eccCCCCc--eeEEEECCEecccc
Q psy14532 228 VTKGDPPL--TISWLKNGLPILSA 249 (258)
Q Consensus 228 ~~~~~p~~--~~~W~~~g~~l~~~ 249 (258)
+.+.+|++ .+.|+++|+.+...
T Consensus 212 ~~g~~P~~~~~v~w~~~g~~l~~~ 235 (291)
T 1mq8_A 212 LDGLFPVSEAQVHLALGDQRLNPT 235 (291)
T ss_dssp ------------------------
T ss_pred cCCCCCCcccEEEEEECCEecCce
Confidence 95334543 69999999998753
No 175
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.87 E-value=2.9e-21 Score=142.61 Aligned_cols=183 Identities=13% Similarity=0.135 Sum_probs=115.7
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeee----eCCc
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVF----PNGT 75 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~ 75 (258)
+.+...+..+.+.+|++|+|.|.+.+.+.+.+.|+|.. ...... ..... .........+..|..+. .+.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 78 (246)
T 4dzb_B 2 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLM---ATSNEGSKATYEQGVEKDKFLINHASLTLST 78 (246)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEE---EEECTTSCCEECTTCCGGGEEEEEEETTEEE
T ss_pred CccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEE---EEEccCCCceecCcccCCcEEEEecCCCEEE
Confidence 45677888899999999999999998888899999831 110000 00000 00000111111222222 2347
Q ss_pred EEEeecccCCCceEEEEEEEeCCc---ceeeceEEEEEec------CCeec--cCCCcceecCCcEEEEeeeCcccCc--
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQG---RSSSQNVHISVTG------APFVR--PMGNVSAIAGEPLYLGCPVAGYPIE-- 142 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~---~~~~~~~~l~v~~------~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~-- 142 (258)
|.|.++ +.+|+|.|+|.+.+..+ ........|.|.. +|.+. .+....+..|+.+.|.|.+.+.+++
T Consensus 79 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~ 157 (246)
T 4dzb_B 79 LTVTSA-HPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 157 (246)
T ss_dssp EEECSC-CGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEECCC-CHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCce
Confidence 999999 99999999999987543 1222455677764 23222 1233345669999999999886654
Q ss_pred eEEEEeCCcccCCCcceEEe--------cCC------eEEEEecccCCC-CcEEEEEEEeCCC
Q psy14532 143 SITWQKGVQQLPLNRRQKVF--------PNG------TLLIENVQKDHD-RGVYWCTATNKQG 190 (258)
Q Consensus 143 ~i~W~~~~~~~~~~~~~~~~--------~~~------~l~i~~~~~~~~-~g~y~C~~~~~~~ 190 (258)
.+.|++++..+......... .++ .|.|..... +| +|.|+|.|.|...
T Consensus 158 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~-~d~~g~YtC~v~~~~~ 219 (246)
T 4dzb_B 158 ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFW-QNPRNHFRCQVQFYGL 219 (246)
T ss_dssp EEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHH-TCTTCEEEEEEEECCB
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHh-ccCCCeEEEEEEecCC
Confidence 89999998877643221110 123 367777766 66 9999999999764
No 176
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.87 E-value=5.8e-21 Score=143.85 Aligned_cols=193 Identities=15% Similarity=0.241 Sum_probs=119.9
Q ss_pred eeeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcE
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTL 76 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l 76 (258)
...|..+.+.+|++|+|.|.+.+.+ .+.+.|+|++ ..+..-. .....+........+..|..+.. +.+|
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 107 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIG--WIDPENGDTEYAPKFQGKATFTTDTSSNTAYL 107 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEE--EEETTTTEEEECGGGBTTEEEEEETTTTEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEE--EEecCCCccccCchhcCcEEEEEecCCCeEEE
Confidence 4567788899999999999998764 5789999963 1110000 00000000000111122222222 3579
Q ss_pred EEeecccCCCceEEEEEEEeCCc---c-eeeceEEEEEecCC---------------eec-cCCCcceecCCcEEEEeee
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQG---R-SSSQNVHISVTGAP---------------FVR-PMGNVSAIAGEPLYLGCPV 136 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~---~-~~~~~~~l~v~~~~---------------~~~-~~~~~~~~~g~~~~l~C~~ 136 (258)
.|.++ +.+|+|.|+|.+.+..+ . .....+.|.|...+ .+. .+....+.+|++++|.|.+
T Consensus 108 ~I~~v-~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~ 186 (282)
T 1qok_A 108 QLSSL-TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSA 186 (282)
T ss_dssp EECSC-CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEE
T ss_pred EECcC-ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEe
Confidence 99999 99999999999998764 1 12244567776543 111 2344568899999999999
Q ss_pred CcccCceEEEEe--CCcccC------------CCcceEEe---cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEE
Q psy14532 137 AGYPIESITWQK--GVQQLP------------LNRRQKVF---PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHI 199 (258)
Q Consensus 137 ~~~~~~~i~W~~--~~~~~~------------~~~~~~~~---~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 199 (258)
.+.+ +.+.|++ ++..+. ...++... ...+|.|.++.. +|+|.|+|.+.+...........|
T Consensus 187 ~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~~~~~~~fg~gt~l 264 (282)
T 1qok_A 187 SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEA-EDAATYYCQQRSSYPLTFGAGTKL 264 (282)
T ss_dssp SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEECSSSSCEECCCEEE
T ss_pred cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCCh-hHCEEEEEEEeeCCCceEeCCEEE
Confidence 9888 8999999 454431 11233222 223699999997 999999999987533223344556
Q ss_pred Eeec
Q psy14532 200 SVTV 203 (258)
Q Consensus 200 ~v~~ 203 (258)
.|..
T Consensus 265 ~V~~ 268 (282)
T 1qok_A 265 ELKR 268 (282)
T ss_dssp EEC-
T ss_pred EEec
Confidence 6643
No 177
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.87 E-value=3.4e-22 Score=146.45 Aligned_cols=182 Identities=14% Similarity=0.226 Sum_probs=95.8
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+.+...+..+.+.+|++|+|.|.+.+.+.+.+.|+|++ ........... ..... ...++... ....+.+|.|.+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~-~~~~~--~~~r~~~~-~~~~~~~L~I~~ 99 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGN-TLRPG--VPSRFSSS-GYGTDFVFTIEN 99 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTS-CBCTT--SCTTCCCC-EEEEEEEEC---
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCC-ccCCC--CCccEEee-ccCCEEEEEECC
Confidence 44566688888999999999999988777789999853 11100000000 00000 00011111 112344799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eEEEEeCCcccC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SITWQKGVQQLP 154 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W~~~~~~~~ 154 (258)
+ +.+|+|.|+|.+.+..+........|.|.. +|.+.. ........|+.+.|.|.+.+. |.+ .+.|++++..+.
T Consensus 100 v-~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 178 (233)
T 3bqu_C 100 M-LSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 178 (233)
T ss_dssp ---CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----
T ss_pred C-CHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCC
Confidence 9 999999999999887653322333455553 343332 233334479999999999885 443 799999998765
Q ss_pred CC-cc-eEE--ecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 155 LN-RR-QKV--FPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 155 ~~-~~-~~~--~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.. .. ... ..+ ..|.|.++.. +|+|.|+|.|.|...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 179 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEY-ERHNSYTCEATHKTS 223 (233)
T ss_dssp CCEEEEECCCCTTTCCEEEEEEEEEEHHHH-HTCCCEEEEEEEC--
T ss_pred CCceEecCCccCCCCCEEEEEEEEECHHHh-CCCCCEEEEEEeCCC
Confidence 44 11 001 111 2577888876 899999999999753
No 178
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.87 E-value=3.8e-22 Score=145.00 Aligned_cols=187 Identities=17% Similarity=0.241 Sum_probs=119.9
Q ss_pred eceeeeecCCCceEEEEEEee-cCCC----eEEEeeCCEeCcCCccccceecccceeeccccccceeee--------eCC
Q psy14532 8 KFIQQTLQPGPPVSLKCIATG-NPTP----HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVF--------PNG 74 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~-~~~~----~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 74 (258)
.+.++.+.+|++++|.|.+.+ .+.+ .+.|+|++....... +..... .......|..+. .++
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~----~~~~~~--~~~~~~~r~~~~~~~~~~~~~~~ 78 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAV----FHQTQG--PSYSESKRLEFVAARLGAELRDA 78 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCC----EEESSS--EEECSCSSCEEESSCSSCCCCCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEE----EECCCC--CCcCCCCcEEEecccCCCCCCCc
Confidence 456678899999999999854 3333 499999864321110 000000 000001122222 367
Q ss_pred cEEEeecccCCCceEEEEEEEeCC-cceeeceEEEEEecCCeeccCCCcceecCCcE-EEEeeeC-cccCceEEEEeCCc
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQ-GRSSSQNVHISVTGAPFVRPMGNVSAIAGEPL-YLGCPVA-GYPIESITWQKGVQ 151 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~-~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~-~l~C~~~-~~~~~~i~W~~~~~ 151 (258)
+|.|.++ +.+|+|.|+|.+.+.. +... ..+.|.|..+|.+..........|+.+ .|.|.+. +.|.+.++|++++.
T Consensus 79 sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~-~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~ 156 (221)
T 3eow_R 79 SLRMFGL-RVEDEGSYTCLFVTFPQGSRS-VDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLG 156 (221)
T ss_dssp EEECCCS-SCCCCSCBEEEEEESSSCSCE-EECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSS
T ss_pred eEEEccC-ChHHCeEEEEEEEeCCCCceE-EEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCC
Confidence 8999999 9999999999999876 4443 677788877765543211112577888 5999986 78999999998755
Q ss_pred ccCCCcceEE------ecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 152 QLPLNRRQKV------FPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 152 ~~~~~~~~~~------~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
.......... ...+.|.|.++.. +|.|.|+|.|.|.... ..+.+.|...|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~ytC~a~n~~~~---~~~~~~v~~~~~ 213 (221)
T 3eow_R 157 GMPQTSQVPGFLSGTVTVTSLWILVPSSQ-VDGKQVTCKVEHESFE---KPQLLTVSLTVY 213 (221)
T ss_dssp CCCCCEEECCCCBTTBCCEEEEECCCCSC-CCCCCEEEEECCSCSS---SCEEEEECCCCC
T ss_pred CCCccceeecCCCCcEEEEEEEEEeCCHH-HCCCeEEEEEECCCCC---CCeEEEEEEEEE
Confidence 4332211111 1123588888876 9999999999998653 556677766553
No 179
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.87 E-value=1.7e-20 Score=135.84 Aligned_cols=176 Identities=18% Similarity=0.216 Sum_probs=111.1
Q ss_pred ceeeceeeeecCCCceEEEEEEee-cC-CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCcEE
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATG-NP-TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLL 77 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~-~~-~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 77 (258)
+.. |.++.+.+|++++|.|.+.+ .+ .+.+.|+|++ ..+........ .....+..+.... .+.+|.
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~-------~~~~~~~~r~~~~~~~~~~~L~ 75 (216)
T 2xzc_L 4 LTQ-PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNN-------KRPSGIPDRFSGSKSGTSATLG 75 (216)
T ss_dssp BBC-CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTT-------BCCTTCCTTEEEEEETTEEEEE
T ss_pred EEC-CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecC-------ccCCCCCCceEEeccCCEEEEE
Confidence 444 67788999999999999543 32 5789999853 11110000000 0000111122221 234799
Q ss_pred EeecccCCCceEEEEEEEeCCc-ceeeceEEEEEec---CCeecc-CCCcceecCCcEEEEeeeCc-ccCc-eEEEEeCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG-RSSSQNVHISVTG---APFVRP-MGNVSAIAGEPLYLGCPVAG-YPIE-SITWQKGV 150 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~---~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~~~~ 150 (258)
|.++ +.+|+|.|+|.+.+..+ ........|.|.. +|.+.. ........|+.+.|.|.+.+ .|.+ .+.|++++
T Consensus 76 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g 154 (216)
T 2xzc_L 76 ITGL-QTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDN 154 (216)
T ss_dssp ECSC-CGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred ECCC-CcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECC
Confidence 9999 99999999999999765 2222445677753 333332 22223346889999999988 4554 89999999
Q ss_pred cccCCC-cc-eEE--ecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 151 QQLPLN-RR-QKV--FPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 151 ~~~~~~-~~-~~~--~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
..+... .. ... ..+ +.|.|.++.. +|+|.|+|.|.|...
T Consensus 155 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~ 203 (216)
T 2xzc_L 155 ALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADY-EKHKVYACEVTHQGL 203 (216)
T ss_dssp EECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHH-TTCCEEEEEEECTTC
T ss_pred eecCCCeeEecCcccCCCCCEEEEEEEEECHHHh-CCCCcEEEEEEcCCC
Confidence 877654 11 111 112 2588888887 999999999999764
No 180
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.87 E-value=3.8e-21 Score=139.54 Aligned_cols=179 Identities=20% Similarity=0.304 Sum_probs=110.7
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeC--CEeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +..+..... ....+........+..|..+.. +++|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~--~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGW--INPYTGESTFADDFKGRFAFFLETSATTAYLQ 82 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEE--ECSSSCCEEECGGGCSSEEEEEEGGGTEEEEE
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEE--EecCCCceEeCcccCCcEEEEEecCCCEEEEE
Confidence 456678899999999999998764 678999986 322110000 0000000000111222222222 35899
Q ss_pred EeecccCCCceEEEEEEEeCCcc---eeeceEEEEEecC----Ceec-cCCCcceecCCcEEEEeeeCc-ccCc-eEEEE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGR---SSSQNVHISVTGA----PFVR-PMGNVSAIAGEPLYLGCPVAG-YPIE-SITWQ 147 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~~----~~~~-~~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~ 147 (258)
|.++ +.+|+|.|+|.+.+..+. .....+.|.|... |.+. ..+...+..|+.+.|.|.+.+ .|.+ .+.|+
T Consensus 83 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 161 (219)
T 1c1e_H 83 INNL-KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 161 (219)
T ss_dssp ECSC-CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred ECCC-CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEE
Confidence 9999 999999999999987631 2224567777653 3222 122334668999999999988 7888 99999
Q ss_pred eCCcccCCCcceE-E-----ecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 148 KGVQQLPLNRRQK-V-----FPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 148 ~~~~~~~~~~~~~-~-----~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+++..+....... . ...+.|.|. ... .|.|.|+|.|.|..+
T Consensus 162 ~~g~~~~~~~~~~~~~~~~~~~~s~L~i~-~~~-~d~g~Y~C~a~n~~~ 208 (219)
T 1c1e_H 162 SGSLSSGVHTFPAVLQSDLYTLSSSVTVP-SSP-RPSETVTCNVAHPAS 208 (219)
T ss_dssp GGTBCTTEEECCCEESSSCEEEEEEEEEE-SSS-TTTSCCEEEEEEGGG
T ss_pred eCCcccceEecCCcccCCeEEEEEEEEEe-ccc-CCCCEEEEEEEeCCC
Confidence 9887643111100 0 112357774 333 466999999999765
No 181
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.87 E-value=3.3e-21 Score=135.17 Aligned_cols=160 Identities=18% Similarity=0.220 Sum_probs=110.2
Q ss_pred eeeeecCCCceEEEEEEe--ecCCCeEEEee--CCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCC
Q psy14532 10 IQQTLQPGPPVSLKCIAT--GNPTPHISWKL--DGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDH 85 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~--~~~~~~v~W~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 85 (258)
..+.+.+|++|+|.|... +.+.+.|.|++ ++..+....... . ......|..+..+++|.|.++ +..
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~------~---~~~~~~R~~~~~ngsL~I~~v-~~~ 76 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEK------E---TFKEKDTYKLFKNGTLKIKHL-KTD 76 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGG------C---EEESCTTEEECTTSCEEECSC-CGG
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCcc------C---CCCCCCeEEECCCCCEEECCC-Chh
Confidence 457788999999999542 24467999999 776553210000 0 001234555667899999999 999
Q ss_pred CceEEEEEEEeCCccee-eceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecC
Q psy14532 86 DRGVYWCTATNKQGRSS-SQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPN 164 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~ 164 (258)
|+|.|+|.+.+..+... ...+.|.|..+.. .+.....+..+.|.|.+.+.|.+.+.|++++..+ .. ..
T Consensus 77 DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~~----~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~------~~ 145 (182)
T 1hnf_A 77 DQDIYKVSIYDTKGKNVLEKIFDLKIQERVS----KPKISWTCINTTLTCEVMNGTDPELNLYQDGKHL-KL------SQ 145 (182)
T ss_dssp GCEEEEEEEEETTSCEEEEEEEEEEEECCCC----CCEEEEETTTTEEEEECSSCSSCEEEEEESSCEE-EE------ES
T ss_pred hCEEEEEEEEeCCCceeEEEEEEEEEcCcCC----CCEEEEccCcEEEEeEccCCCCCEEEEEECCEEC-CC------CC
Confidence 99999999999877643 2567788875421 1111123447999999998888999999998876 11 22
Q ss_pred CeEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 165 GTLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 165 ~~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
..+.+.. .. +|.|.|+|.|.|..+..
T Consensus 146 ~~i~~~~-~~-~d~G~Y~C~a~N~~~~~ 171 (182)
T 1hnf_A 146 RVITHKW-TT-SLSAKFKCTAGNKVSKE 171 (182)
T ss_dssp SCEEEEC-CS-CEEEEEEEEEECSSCEE
T ss_pred cEEEEec-cc-CCCcEEEEEEEeCCCCc
Confidence 3344433 34 89999999999998743
No 182
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.86 E-value=2.2e-21 Score=141.51 Aligned_cols=178 Identities=18% Similarity=0.283 Sum_probs=106.1
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeee-----eCCcE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVF-----PNGTL 76 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~l 76 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.+ ..+..- ..... +........+..|..+. .+.+|
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (227)
T 1mju_H 5 QQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWI---GNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYM 81 (227)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEE---EEEETTTTEEEECGGGTTTEEEEEETTTTEEEE
T ss_pred cCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEE---EEEeccCCceeeCCccCCcEEEEEeCCCCeEEE
Confidence 446678899999999999998765 5789999853 211000 00000 00000011122233332 24579
Q ss_pred EEeecccCCCceEEEEEEEeCCcceeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eEEEEeC
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SITWQKG 149 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W~~~ 149 (258)
.|.++ +.+|+|.|.|.+.+...........|.|.. +|.+.. .....+..|+.+.|.|.+.+. |.+ .+.|+++
T Consensus 82 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 160 (227)
T 1mju_H 82 QLSSL-TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSG 160 (227)
T ss_dssp EECSC-CGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EECCC-CcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecC
Confidence 99999 999999999999986432222445777764 232221 222345679999999999885 766 9999998
Q ss_pred CcccCCC--cce----EEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 150 VQQLPLN--RRQ----KVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 150 ~~~~~~~--~~~----~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+..+... ... .....+.|.|..+.. +| |.|+|.|.|...
T Consensus 161 g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-g~Y~C~a~n~~~ 205 (227)
T 1mju_H 161 SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTW-PS-QSITCNVAHPAS 205 (227)
T ss_dssp TBCTTEEECCCEEETTEEEEEEEEEECTTTT-TT-SCCEEEEEEGGG
T ss_pred CCcCCcEECCceecCCeEEEEEEEEEchhhc-CC-CeEEEEEEECCC
Confidence 8764211 111 111234577777765 67 999999999654
No 183
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.86 E-value=1.6e-20 Score=138.73 Aligned_cols=176 Identities=18% Similarity=0.272 Sum_probs=114.0
Q ss_pred cceeeceeeeecCCCceEEEEEEeecC-----CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eC
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNP-----TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PN 73 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~-----~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 73 (258)
.+...|.++.+.+|++|+|.|.+.+.+ .+.+.|+|.. ..+... ..... .....+..|.... ..
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~------~~~~~-~~~~~~~~r~~~~~~~~~ 75 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLL------IYKVS-NRFSGVPDRFSGSGSGTD 75 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEE------EETTT-EECTTCCTTEEEEEETTE
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEE------EEEec-ccCCCCCCcEEeccCCCE
Confidence 466778889999999999999998876 6799999842 111000 00000 0000011121111 23
Q ss_pred CcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCC--------------eeccCCCcceecCCcEEEEeeeCcc
Q psy14532 74 GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP--------------FVRPMGNVSAIAGEPLYLGCPVAGY 139 (258)
Q Consensus 74 ~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~--------------~~~~~~~~~~~~g~~~~l~C~~~~~ 139 (258)
.+|.|.++ +.+|+|.|.|.+.+..+........|.|..++ .+.......+.+|+.++|.|.+.+.
T Consensus 76 ~~L~I~~v-~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 154 (247)
T 1svz_A 76 FTLKISRV-EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNY 154 (247)
T ss_dssp EEEEESSC-CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESS
T ss_pred EEEEECCC-CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCc
Confidence 47999999 99999999999998755433244567776532 2223344568899999999999876
Q ss_pred c--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEecccCCCCcEEEEEEEeC
Q psy14532 140 P--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 140 ~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
+ .+.+.|+++. .... ...++.+.. ..+|.|.+++. +|+|.|+|.+.|.
T Consensus 155 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 155 AFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKN-EDTATYFCVRDRH 228 (247)
T ss_dssp CGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCG-GGCEEEEEEEEEG
T ss_pred ccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCCh-hHCEEEEEEEecc
Confidence 4 5699999963 2110 122333321 23799999997 9999999999985
No 184
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.86 E-value=3.7e-21 Score=143.65 Aligned_cols=154 Identities=23% Similarity=0.386 Sum_probs=114.1
Q ss_pred ceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCce
Q psy14532 9 FIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRG 88 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G 88 (258)
+.+..+.+|+.+.|.|.+. |.+.+.| +|..+.... ..+.|.|..+ ..+|.|
T Consensus 105 ~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~------------------------~~~~l~i~~~-~~~~~g 155 (265)
T 2oz4_A 105 LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG------------------------PRAQLLLKAT-PEDNGR 155 (265)
T ss_dssp ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS------------------------SEECCEEECC-GGGTTE
T ss_pred cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC------------------------CcEEEEEccc-cccCCc
Confidence 4566788999999999988 7889999 666552210 1246778888 899999
Q ss_pred EEEEEEEeCC-ccee--eceEEEEEecCCeecc---CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEe
Q psy14532 89 VYWCTATNKQ-GRSS--SQNVHISVTGAPFVRP---MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVF 162 (258)
Q Consensus 89 ~Y~C~~~~~~-~~~~--~~~~~l~v~~~~~~~~---~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~ 162 (258)
.|+|.+.+.. |... +..+.|.|..+|.+.. +....+.+|+.+.|.|.+.|.|.+.+.|++++..+ .
T Consensus 156 ~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~--------~ 227 (265)
T 2oz4_A 156 SFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP--------L 227 (265)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEE--------C
T ss_pred eEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCccc--------C
Confidence 9999998644 4432 2667788876664432 23457889999999999999999999999998721 2
Q ss_pred cCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 163 PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 163 ~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
..+.+. .+.. +|+|.|+|.|.|..| ..+..+.|.|.+
T Consensus 228 ~~g~~~--~v~~-~d~G~Y~C~a~N~~G-~~~~~~~l~V~~ 264 (265)
T 2oz4_A 228 PIGESV--TVTR-DLEGTYLCRARSTQG-EVTREVTVNVLS 264 (265)
T ss_dssp CTTSCE--ECCG-GGCEEEEEEEEETTE-EEEEEEEEEEEC
T ss_pred CCCcEE--Eeeh-hhCeEEEEEEECCCC-cEEEEEEEEEec
Confidence 233332 3666 899999999999887 455677777764
No 185
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.86 E-value=1.3e-20 Score=136.77 Aligned_cols=181 Identities=19% Similarity=0.318 Sum_probs=112.3
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. .....-. .....+........+..|..+.. +.+|.
T Consensus 5 ~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (220)
T 2fbj_H 5 LESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIG--EIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQ 82 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEE--EECTTSSCEEECTTTTTTEEEEECSSSCEEEEE
T ss_pred ecCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEE--EEccCCCceecCCccCCcEEEEeeCCCCEEEEE
Confidence 345668899999999999998754 5689999853 1110000 00000000001111223333332 34799
Q ss_pred EeecccCCCceEEEEEEEeCCcc--eeeceEEEEEecC----CeeccCCCcceecCCcEEEEeeeCcc-cC--ceEEEEe
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGR--SSSQNVHISVTGA----PFVRPMGNVSAIAGEPLYLGCPVAGY-PI--ESITWQK 148 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~----~~~~~~~~~~~~~g~~~~l~C~~~~~-~~--~~i~W~~ 148 (258)
|.++ +.+|+|.|.|.+.+..+. .......|.|... |.+.......+..|+.+.|.|.+.+. |. +.+.|++
T Consensus 83 I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~ 161 (220)
T 2fbj_H 83 MSKV-RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGK 161 (220)
T ss_dssp ECSC-CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEESC
T ss_pred ECCC-ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEec
Confidence 9999 999999999999987543 1224457777642 33322223345689999999999885 65 6999999
Q ss_pred CCcccCCC-cceEEecCC------eEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 149 GVQQLPLN-RRQKVFPNG------TLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 149 ~~~~~~~~-~~~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
++..+... .......++ .|.|.+... +|.|.|+|.|.|..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~ytC~v~n~~~~ 210 (220)
T 2fbj_H 162 SGKDITTVNFPPALASGGRYTMSNQLTLPAVEC-PEGESVKCSVQHDSNP 210 (220)
T ss_dssp CCSSCEEEECCCEECSSSCEEEEEEEEECGGGS-CTTCEEEEEEEETTSC
T ss_pred CCEecceEecCceECCCCCEEEEEEEEECHHHc-CCCCeEEEEEEcCCCc
Confidence 88765210 111111222 367766665 7899999999998764
No 186
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.86 E-value=8.8e-21 Score=141.13 Aligned_cols=183 Identities=19% Similarity=0.228 Sum_probs=106.3
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCcccccee-cccceeeccccccce-----eeee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNR-IGEARVQQLPLNRRQ-----KVFP 72 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~ 72 (258)
++|.+...+.++.+.+|++|+|.|.+.+.+.+.+.|+|. +...... .... ..........+..+. ....
T Consensus 1 ~s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 77 (259)
T 3omz_A 1 MSSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRL---LYYDSYTSSVVLESGISPGKYDTYGSTRK 77 (259)
T ss_dssp ----------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEE---EEEETTTCCEEECTTCCBTTEEEECC--C
T ss_pred CccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEE---EEEecCcCccccCCCCCcceeEeecCCCC
Confidence 367888888999999999999999998888889999983 1111000 0000 000000111111111 1123
Q ss_pred CCcEEEeecccCCCceEEEEEEEeCCcc--eeeceEEEEEecC-----------------Ce-eccCCCcceecCCcEEE
Q psy14532 73 NGTLLIENVQKDHDRGVYWCTATNKQGR--SSSQNVHISVTGA-----------------PF-VRPMGNVSAIAGEPLYL 132 (258)
Q Consensus 73 ~~~l~i~~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~-----------------~~-~~~~~~~~~~~g~~~~l 132 (258)
+.+|.|.++ +.+|+|.|.|.+.+..+. .......|.|... +. ...+....+.+|++++|
T Consensus 78 ~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L 156 (259)
T 3omz_A 78 NLRMILRNL-IENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTL 156 (259)
T ss_dssp CCEEEESSC-CGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEE
T ss_pred eEEEEECCC-CcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEE
Confidence 457999999 999999999999987542 2235566777653 12 22345577889999999
Q ss_pred EeeeCcc-cCceEEEEeCCc--ccC------------CCcceEEe-----cCCeEEEEecccCCCCcEEEEEEEeC
Q psy14532 133 GCPVAGY-PIESITWQKGVQ--QLP------------LNRRQKVF-----PNGTLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 133 ~C~~~~~-~~~~i~W~~~~~--~~~------------~~~~~~~~-----~~~~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
.|.+.+. +.+.+.|+++.. ... ...++.+. ....|.|.+++. +|+|.|.|.+...
T Consensus 157 ~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 157 NCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQL-EDSAKYFCALGES 231 (259)
T ss_dssp CCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCG-GGCSEEEEEEESC
T ss_pred EEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCCh-hHCEEEEEEEeCc
Confidence 9988764 778999998532 110 01223222 123599999998 9999999999853
No 187
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.86 E-value=8.7e-22 Score=152.21 Aligned_cols=161 Identities=23% Similarity=0.367 Sum_probs=119.7
Q ss_pred eeecCCCceEEEEE-----EeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCC
Q psy14532 12 QTLQPGPPVSLKCI-----ATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHD 86 (258)
Q Consensus 12 ~~~~~g~~v~l~C~-----~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 86 (258)
..+.+|+++.|.|. +.+.|.+.+.|+|++..+.... .++... ...++|.|.++ +..|
T Consensus 130 ~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~--~~~~~~---------------~~~~~L~i~~v-~~~d 191 (339)
T 3o4o_C 130 QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDN--EKFLSV---------------RGTTHLLVHDV-ALED 191 (339)
T ss_dssp EEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTC--SSEEEC---------------TTSSEEEESSC-CGGG
T ss_pred eEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCC--ceeEEc---------------CCcceEEEccc-CHhh
Confidence 46789999999999 6778888999999988775431 111111 12357999999 9999
Q ss_pred ceEEEEEEEeCCcc---eeeceEEEEEecC-----Cee-ccCCCcceecCCcEEEEeee---Cccc-CceEEEEeCCccc
Q psy14532 87 RGVYWCTATNKQGR---SSSQNVHISVTGA-----PFV-RPMGNVSAIAGEPLYLGCPV---AGYP-IESITWQKGVQQL 153 (258)
Q Consensus 87 ~G~Y~C~~~~~~~~---~~~~~~~l~v~~~-----~~~-~~~~~~~~~~g~~~~l~C~~---~~~~-~~~i~W~~~~~~~ 153 (258)
+|.|+|.+.+..+. ..+..+.|.|... |.+ ..+....+..|+.+.|.|.+ .+.| .+.+.|++++..+
T Consensus 192 ~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~ 271 (339)
T 3o4o_C 192 AGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHI 271 (339)
T ss_dssp CEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCS
T ss_pred CeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeec
Confidence 99999999997764 2336777888643 232 23445578889999999999 8888 8899999988765
Q ss_pred CC---------CcceEEecCC------eEEEEecccCCCC-cEEEEEEEeCCCC
Q psy14532 154 PL---------NRRQKVFPNG------TLLIENVQKDHDR-GVYWCTATNKQGR 191 (258)
Q Consensus 154 ~~---------~~~~~~~~~~------~l~i~~~~~~~~~-g~y~C~~~~~~~~ 191 (258)
.. ..+.....++ .|.|.++.. +|. |.|+|.|.|..|.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~-~d~~G~Y~C~a~N~~G~ 324 (339)
T 3o4o_C 272 ESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTR-EDLHMDFKCVVHNTLSF 324 (339)
T ss_dssp SSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCC-CSCCCCCEEEEEETTEE
T ss_pred ccccccccceecceEEecccCceEEEEEEEEEEech-hhcCccEEEEEEeccCc
Confidence 32 1222233344 699999997 886 9999999999874
No 188
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.86 E-value=1.3e-20 Score=140.05 Aligned_cols=173 Identities=17% Similarity=0.304 Sum_probs=109.9
Q ss_pred eeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCcEEEe
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLLIE 79 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~ 79 (258)
..+..+.+.+|++|+|.|.+.+. +.+.+.|+|.. ..... . +............+.... .+.+|.|.
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~------~-~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 79 (256)
T 3ux9_B 7 TQPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKL------L-IYDNNQRPSGVPDRFSGSKSGTSASLAIT 79 (256)
T ss_dssp BCCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEE------E-EBTTTBCCTTCCTTEEEEEETTEEEEEEC
T ss_pred ecCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEE------E-EEecCCCCCCcCCcEEEEccCCEEEEEEC
Confidence 34556889999999999999876 67899999852 11100 0 000000000111121111 13369999
Q ss_pred ecccCCCceEEEEEEEeCCcc--eeeceEEEEEecCC---------------------eeccCCCcceecCCcEEEEeee
Q psy14532 80 NVQKDHDRGVYWCTATNKQGR--SSSQNVHISVTGAP---------------------FVRPMGNVSAIAGEPLYLGCPV 136 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~---------------------~~~~~~~~~~~~g~~~~l~C~~ 136 (258)
++ +.+|+|.|+|.+.+..+. .......|.|...+ .+.......+.+|+.++|.|.+
T Consensus 80 ~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~ 158 (256)
T 3ux9_B 80 GL-QSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAA 158 (256)
T ss_dssp SC-CGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEE
T ss_pred CC-ChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEE
Confidence 99 999999999999986432 22245667776543 2223344568899999999999
Q ss_pred Cccc--CceEEEEeCC--cccC-----------------CCcceEEecC-----CeEEEEecccCCCCcEEEEEEEeC
Q psy14532 137 AGYP--IESITWQKGV--QQLP-----------------LNRRQKVFPN-----GTLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 137 ~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~-----~~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
.+.+ .+.+.|+++. ..+. ...++.+..+ .+|.|.+++. +|+|.|+|.+.+.
T Consensus 159 ~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 159 SGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRA-EDTAVYYCARYID 235 (256)
T ss_dssp ESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCG-GGCEEEEEEEEET
T ss_pred eCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCCh-hhCEEEEEEEEcC
Confidence 8755 6799999863 2210 1113333221 2499999998 9999999999986
No 189
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.86 E-value=8.4e-21 Score=137.98 Aligned_cols=179 Identities=17% Similarity=0.248 Sum_probs=111.0
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceeccc--ceeeccccccceeeee-----CCc
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGE--ARVQQLPLNRRQKVFP-----NGT 75 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~ 75 (258)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. .....-. .....+. .......+..|..+.. +.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 82 (222)
T 1q9r_B 5 VESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLG--FIRNKANGYTTEYSPSVKGRFTISRDNSQSILY 82 (222)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEE--EECCGGGTTCEEECTTTBTTEEEEEETTTTEEE
T ss_pred ecCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEE--EEccCCcccccccCcccCCceEEEEECCCCeEE
Confidence 345677899999999999998754 6789999853 2110000 0000000 0001111222333322 347
Q ss_pred EEEeecccCCCceEEEEEEEeCCcc----eeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eE
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQGR----SSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SI 144 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i 144 (258)
|.|.++ +.+|+|.|.|.+.+..+. .......|.|.. +|.+.. .....+..|+.+.|.|.+.+. |.+ .+
T Consensus 83 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 161 (222)
T 1q9r_B 83 LQMNTL-RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTV 161 (222)
T ss_dssp EEECSC-CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEE
T ss_pred EEECcC-CcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEE
Confidence 999999 999999999999986531 111345677764 232221 222335679999999999885 877 99
Q ss_pred EEEeCCcccCCCcceEE------ecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 145 TWQKGVQQLPLNRRQKV------FPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 145 ~W~~~~~~~~~~~~~~~------~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.|++++..+........ ...+.|.|.++.. +| |.|+|.|.|..+
T Consensus 162 ~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d-g~y~C~a~n~~~ 211 (222)
T 1q9r_B 162 TWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTW-PS-ETVTCNVAHPAS 211 (222)
T ss_dssp EEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTT-TT-SCCEEEEEEGGG
T ss_pred EEecCCeEcceEeccccccCCcEEEEEEEEECchhc-CC-CeEEEEEEccCC
Confidence 99998876542211111 1123578877776 78 999999999876
No 190
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.86 E-value=9e-21 Score=133.09 Aligned_cols=161 Identities=18% Similarity=0.233 Sum_probs=108.6
Q ss_pred ceeeeecCCCceEEEEEEee-cCCCeEEEeeC-CEeCcCCccccceecccceeeccccccceee-eeCCcEEEeecccCC
Q psy14532 9 FIQQTLQPGPPVSLKCIATG-NPTPHISWKLD-GYPLAGDRHENKNRIGEARVQQLPLNRRQKV-FPNGTLLIENVQKDH 85 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~~-~~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~ 85 (258)
...+.+.+|++|+|.|.+.. .+.+.+.|+|+ +..+......... ......+..|..+ ..+++|.|.++ +..
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~-----~~~~~~~~~R~~l~~~~~sL~I~~v-~~~ 79 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKK-----TVFESVFKDRVDLDKTNGALRIYNV-SKE 79 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCE-----EECSSTTTTTEEECTTTCCEEECSC-CGG
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCe-----eEcchhcCCeEEEeCCCccEEEcCC-CHH
Confidence 34678899999999998754 34679999995 3322211000000 0111233345444 46789999999 999
Q ss_pred CceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeee-CcccCceEEEEeCCcccCCCcceEEecC
Q psy14532 86 DRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQLPLNRRQKVFPN 164 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~~~~~~~~~~~~ 164 (258)
|+|.|+|.+.+.. .....+.|.|..++. .+.....++.+.|.|.+ .+ |.+.+.|++++..+. ...+
T Consensus 80 D~G~Y~C~v~~~~--~~~~~~~L~V~~~~~----~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~------~~~~ 146 (180)
T 2dru_A 80 DRGDYYMRMLHET--EDQWKITMEVYEMVS----KPMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLR------SLRQ 146 (180)
T ss_dssp GCEEEEEEEESSS--EEEEEEEEEEECCCC----CCEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEE------EESS
T ss_pred HCeEEEEEEEcCC--eEEEEEEEEEECCCC----CCEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECc------CCCC
Confidence 9999999998766 333777888876421 11122345679999999 66 889999999998764 1234
Q ss_pred CeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 165 GTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 165 ~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
.++.+.. . +|+|.|+|.|.|..+.
T Consensus 147 ~~l~~~~--~-~d~g~Y~C~a~N~~~~ 170 (180)
T 2dru_A 147 KTMSYQW--T-NLRAPFKCKAVNRVSQ 170 (180)
T ss_dssp SEEEEEC--S-CCSSCEEEEEEETTEE
T ss_pred CEEEEEE--h-hcCccEEEEEecCcCc
Confidence 4555532 4 8999999999998763
No 191
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.86 E-value=2e-21 Score=140.27 Aligned_cols=176 Identities=15% Similarity=0.211 Sum_probs=113.2
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCcEEEe
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLLIE 79 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~ 79 (258)
+.. +..+.+.+|++++|.|.+.+.+.+.+.|+|++ ..+........ .....+..+..+. .+.+|.|.
T Consensus 3 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~-------~~~~~~~~r~~~~~~~~~~~L~I~ 74 (212)
T 1nfd_E 3 LIQ-PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDN-------KRPSGIPERFSGSTSGTTATLTIS 74 (212)
T ss_dssp EEC-CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTT-------BCCTTSCTTEEEEEETTEEEEEET
T ss_pred eEC-CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEecc-------ccCCCccccEEEEeeCCEEEEEEC
Confidence 444 77889999999999999887777789999852 22110000000 0000111121111 23479999
Q ss_pred ecccCCCceEEEEEEEeCCc--ceeeceEEEEEe----cCCeecc-CCCcceecCCcEEEEeeeCcc-cC-ceEEEEeCC
Q psy14532 80 NVQKDHDRGVYWCTATNKQG--RSSSQNVHISVT----GAPFVRP-MGNVSAIAGEPLYLGCPVAGY-PI-ESITWQKGV 150 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~--~~~~~~~~l~v~----~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~i~W~~~~ 150 (258)
++ +.+|+|.|+|.+.+... ........|.|. .+|.+.. .....+..|+.+.|.|.+.+. |. +.+.|++++
T Consensus 75 ~v-~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g 153 (212)
T 1nfd_E 75 GA-QPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANG 153 (212)
T ss_dssp TC-CGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETT
T ss_pred cC-CcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECC
Confidence 99 99999999999996322 122244566664 2333332 333445679999999999886 54 799999998
Q ss_pred cccCCCcceE--------EecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 151 QQLPLNRRQK--------VFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 151 ~~~~~~~~~~--------~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
..+....... ....+.|.|.++.. +|+|.|+|.|.|...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~ 200 (212)
T 1nfd_E 154 ATINDGVKTTKPSKQGQNYMTSSYLSLTADQW-KSHNRVSCQVTHEGE 200 (212)
T ss_dssp EEECSSCBCCCCBCSSSCEEEEEBCCEEHHHH-HTCSCEEEEEECTTT
T ss_pred eEcCCCeecCCceecCCCceEEEEEEEchhhc-CCCCeEEEEEEeCCc
Confidence 7765432110 11124588889887 899999999999865
No 192
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.86 E-value=1.9e-20 Score=140.87 Aligned_cols=196 Identities=16% Similarity=0.212 Sum_probs=119.1
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCcccccee-cccceeeccccccceeeeeC----
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNR-IGEARVQQLPLNRRQKVFPN---- 73 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---- 73 (258)
+.+.. +..+.+.+|++|+|.|.+.+. +.+.+.|+|.. ...... .... ..........+..|..+..+
T Consensus 2 ~~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 77 (280)
T 3fku_X 2 VQLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWL---GGISPMFGTPNYAQKFQGRVTITADQSTR 77 (280)
T ss_dssp CCEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCC---EEECTTTCCEEECGGGTTTCEEEEETTTT
T ss_pred CeEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEE---EEEeccCCccccCcccCCcEEEEEeCCCC
Confidence 34555 788999999999999999874 55789999842 111100 0000 00000111122233333322
Q ss_pred -CcEEEeecccCCCceEEEEEEEeC--------CcceeeceEEEEEec---------------CCeeccCCCcceecCCc
Q psy14532 74 -GTLLIENVQKDHDRGVYWCTATNK--------QGRSSSQNVHISVTG---------------APFVRPMGNVSAIAGEP 129 (258)
Q Consensus 74 -~~l~i~~~~~~~d~G~Y~C~~~~~--------~~~~~~~~~~l~v~~---------------~~~~~~~~~~~~~~g~~ 129 (258)
.+|.|.++ +.+|+|.|.|.+.+. ..........|.|.. ++.+...+...+.+|++
T Consensus 78 ~~sL~I~~v-~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~ 156 (280)
T 3fku_X 78 TAYMDLRSL-RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQT 156 (280)
T ss_dssp EEEEEECSC-CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCC
T ss_pred EEEEEECCC-ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCC
Confidence 37999999 999999999999886 122222455677765 33333333477889999
Q ss_pred EEEEeeeCc-cc-CceEEEEeC--CcccC------------CCcceEEecC---CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 130 LYLGCPVAG-YP-IESITWQKG--VQQLP------------LNRRQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 130 ~~l~C~~~~-~~-~~~i~W~~~--~~~~~------------~~~~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
++|.|.+.+ .+ .+.+.|++. +.... ...++....+ ..|.|.+++. +|+|.|.|.+.+..+
T Consensus 157 v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~~~~~ 235 (280)
T 3fku_X 157 ATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQP-EDEADYYCSTWDSSL 235 (280)
T ss_dssp EEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCG-GGCSEEEEEEEETTT
T ss_pred EEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCH-HHCEEEEEEEecCCC
Confidence 999999987 33 478999983 22211 1122222221 2499999997 999999999998652
Q ss_pred --CCccceEEEEeecC
Q psy14532 191 --RSSSQNVHISVTVP 204 (258)
Q Consensus 191 --~~~~~~~~l~v~~~ 204 (258)
........|.|...
T Consensus 236 ~~~~~g~~t~l~V~~~ 251 (280)
T 3fku_X 236 SAVVFGGGTKLTVLGQ 251 (280)
T ss_dssp TEEEEBCCCEEEEC--
T ss_pred CceEECCCEEEEECCC
Confidence 11233445555443
No 193
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.85 E-value=9.1e-20 Score=135.94 Aligned_cols=178 Identities=15% Similarity=0.241 Sum_probs=116.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecC------CCeEEEeeC--CEeCcCCccccceecccceeeccccccceeee--
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNP------TPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVF-- 71 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~------~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 71 (258)
.+.+...|..+.+.+|++|+|.|.+.+.+ .+.+.|+|. +..+..- ...... ....+..|....
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l------~~~~~~-~~~~~~~R~~~~~~ 77 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLL------ISWAFT-RKSGVPDRFTGSGS 77 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEE------EETTTE-ECTTSCTTEEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEE------EEeccc-CCCCCCccEEEecC
Confidence 45677888899999999999999998776 578999985 2211100 000000 000011122111
Q ss_pred -eCCcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCC--------------------eeccCCCcceecCCcE
Q psy14532 72 -PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP--------------------FVRPMGNVSAIAGEPL 130 (258)
Q Consensus 72 -~~~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~--------------------~~~~~~~~~~~~g~~~ 130 (258)
...+|.|.++ +.+|+|.|.|.+.+..+........|.|..++ .+.......+.+|+++
T Consensus 78 ~~~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v 156 (264)
T 2gjj_A 78 GTDFTLTIGSV-KAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASV 156 (264)
T ss_dssp TTEEEEEESSC-CGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCE
T ss_pred CCEEEEEECCC-CHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcE
Confidence 2347999999 99999999999998754333244577776542 1222334568899999
Q ss_pred EEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEe-----cCCeEEEEecccCCCCcEEEEE
Q psy14532 131 YLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVF-----PNGTLLIENVQKDHDRGVYWCT 184 (258)
Q Consensus 131 ~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~-----~~~~l~i~~~~~~~~~g~y~C~ 184 (258)
+|.|.+.+.+ .+.+.|+++. .... ...+..+. ....|.|.++.. +|+|.|+|.
T Consensus 157 ~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~ 235 (264)
T 2gjj_A 157 KISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTS-EDSADYYCV 235 (264)
T ss_dssp EEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG-GGCEEEEEE
T ss_pred EEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCc-ccCEEEEEE
Confidence 9999998765 3799999963 2211 01222222 123799999997 999999999
Q ss_pred EEeC
Q psy14532 185 ATNK 188 (258)
Q Consensus 185 ~~~~ 188 (258)
+.|.
T Consensus 236 a~n~ 239 (264)
T 2gjj_A 236 RSGN 239 (264)
T ss_dssp EECS
T ss_pred EecC
Confidence 9985
No 194
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.85 E-value=6.7e-21 Score=141.50 Aligned_cols=179 Identities=17% Similarity=0.247 Sum_probs=115.1
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceee-----eeCCc
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKV-----FPNGT 75 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 75 (258)
+++...+.++.+.+|++|+|.|.+.+.+.+.+.|+|.. ...... ....... .......+... ..+.+
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~---~~~~~~~r~~~~~~~~~~~~s 77 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQML---LKYYSGD---PVVQGVNGFEAEFSKSDSSFH 77 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEE---EEECSSC---SEEECSTTCEEEEETTTTEEE
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEE---EEEccCC---cccccCCCeEEEEcCCCCEEE
Confidence 45677788899999999999999998888999999842 111000 0000000 00001111111 12346
Q ss_pred EEEeecccCCCceEEEEEEEeCCcc---eeeceEEEEEec--------------------CCee-ccCCCcceecCCcEE
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQGR---SSSQNVHISVTG--------------------APFV-RPMGNVSAIAGEPLY 131 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~--------------------~~~~-~~~~~~~~~~g~~~~ 131 (258)
|.|.++ +.+|+|.|+|.+.+..+. .......|.|.. ++.+ ..+....+.+|+.++
T Consensus 78 L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~ 156 (256)
T 3tf7_C 78 LRKASV-HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVT 156 (256)
T ss_dssp EEESSC-CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEE
T ss_pred EEECCC-CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEE
Confidence 999999 999999999999986532 122445677765 2222 224455677999999
Q ss_pred EEeeeCcccCceEEEEeCCcccC-----------------CCcceEEe----cCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 132 LGCPVAGYPIESITWQKGVQQLP-----------------LNRRQKVF----PNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 132 l~C~~~~~~~~~i~W~~~~~~~~-----------------~~~~~~~~----~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
|.|.+.+. .+.+.|++...... ...++... ...+|.|.++.. +|+|.|+|.+.|..+
T Consensus 157 L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 157 LSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASP-SQTSLYFCASSDAPG 234 (256)
T ss_dssp ECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCG-GGCEEEEEEEEEETT
T ss_pred EEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCH-HHCEEEEEEecCCCC
Confidence 99999876 67899998432110 01112211 223699999998 999999999998754
No 195
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.85 E-value=1.2e-20 Score=131.27 Aligned_cols=157 Identities=17% Similarity=0.134 Sum_probs=106.0
Q ss_pred eeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceee-eeCCcEEEeecccCCCce
Q psy14532 10 IQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKV-FPNGTLLIENVQKDHDRG 88 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~d~G 88 (258)
..+.+.+|++|+|.|.+.+ +.+.+.|++++..+..... .... ....+..|..+ ..+++|.|.++ +..|+|
T Consensus 3 ~~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~-~~~~------~~~~~~~R~~~~~~~~sL~I~~v-~~~DsG 73 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELEN-SEFR------AFSSFKNRVYLDTVSGSLTIYNL-TSSDED 73 (171)
T ss_dssp EEEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEET-TEEE------ECGGGTTSEEECTTTCCEEECSC-CGGGCE
T ss_pred cEEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcC-CCcc------cccccCCcEEEeCCCCeEEECCC-ChhhCc
Confidence 4567899999999998854 7889999998764332210 0000 01123333333 25789999999 999999
Q ss_pred EEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEE
Q psy14532 89 VYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLL 168 (258)
Q Consensus 89 ~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~ 168 (258)
.|.|.+.+..+ ...+.|.|..++.. +.... ......|.|.+.+.|.+.+.|++++..+.... ...+.
T Consensus 74 ~Y~C~~~n~~~---~~~~~L~V~~~~~~---p~i~~-~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~------~~~l~ 140 (171)
T 1ccz_A 74 EYEMESPNITD---TMKFFLYVLEMVSK---PMIYW-ECSNATLTCEVLEGTDVELKLYQGKEHLRSLR------QKTMS 140 (171)
T ss_dssp EEEEECTTCCS---CEEEEEEEECCCCC---CEEEE-ETTTTEEEEECSSCSSCEEEEEETTEEEEEES------SSEEE
T ss_pred eEEEEEeCCCC---cEEEEEEEECcCCC---CEEEE-ecCCcEEEEEeCCCCCcEEEEEECCEECcCCc------ceEEE
Confidence 99999988766 36778888765321 11111 11123799999988899999999988765321 22333
Q ss_pred EEecccCCCCcEEEEEEEeCCCC
Q psy14532 169 IENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 169 i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
+. .. .|.|.|+|.|.|..+.
T Consensus 141 ~~--~~-~~~g~Y~C~a~N~~~~ 160 (171)
T 1ccz_A 141 YQ--WT-NLRAPFKCKAVNRVSQ 160 (171)
T ss_dssp EE--CS-CCSSCEEEEEEETTEE
T ss_pred Ee--cc-CCCceEEEEEEcccCc
Confidence 33 23 8899999999998763
No 196
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.85 E-value=2.9e-21 Score=140.01 Aligned_cols=176 Identities=15% Similarity=0.205 Sum_probs=110.1
Q ss_pred CCcceeeceeee--ecCCCceEEEEEEeec---C-CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCc
Q psy14532 2 HPQLIYKFIQQT--LQPGPPVSLKCIATGN---P-TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGT 75 (258)
Q Consensus 2 ~p~~~~~~~~~~--~~~g~~v~l~C~~~~~---~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (258)
+|.+...+.... +.+|++++|.|.+.+. + .+.|.|+|++..+...... . ...+.. ......++
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~--~--------~~~~~~-~~~~~~~~ 77 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQ--T--------HREDYN-STIRVVST 77 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEE--E--------EEETTT-TEEEEEEE
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccc--c--------ccccCC-CeEEEEEE
Confidence 566655555544 8899999999999886 3 3689999998766433100 0 000000 01112457
Q ss_pred EEEeecccCCCceEEEEEEEeCCcce-eeceEEE--EEecCCeecc-CCCcceecCCcEEEEeeeCc-ccCc-eEEEEeC
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHI--SVTGAPFVRP-MGNVSAIAGEPLYLGCPVAG-YPIE-SITWQKG 149 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l--~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~~~ 149 (258)
|.|.++ +.+|+|.|+|.+.+..+.. ....+.+ .+..+|.+.. ........|+.+.|.|.+.| +|.+ .|+|+++
T Consensus 78 L~I~~~-~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~ 156 (218)
T 2rgs_A 78 LPIQHQ-DWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSN 156 (218)
T ss_dssp EECCHH-HHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EEEcHH-HcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEEC
Confidence 999999 9999999999999976543 1122211 2333443322 22222235899999999998 5655 9999999
Q ss_pred CcccCCCcc--eEEecCCeEEE------EecccCCCCcEEEEEEEeCCC
Q psy14532 150 VQQLPLNRR--QKVFPNGTLLI------ENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 150 ~~~~~~~~~--~~~~~~~~l~i------~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+..+..... .....++++.+ ..... +|.|.|+|.|.|...
T Consensus 157 g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~-~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 157 GHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKW-EKTDSFSCNVRHEGL 204 (218)
T ss_dssp TEEECCEEECCCEECTTSCEEEEEEEEEEHHHH-HHCSCEEEEEECTTS
T ss_pred CEeccCceecccEECCCCCEEEEEEEEECHHHc-CCCCeEEEEEEcCCC
Confidence 987643221 11234454433 33333 468999999999764
No 197
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.85 E-value=4.4e-20 Score=139.57 Aligned_cols=196 Identities=16% Similarity=0.269 Sum_probs=117.3
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee-----eCCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF-----PNGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~ 77 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. .....-. ..............+..|..+. .+.+|.
T Consensus 27 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 104 (291)
T 2gki_A 27 QQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIG--YINPYNDGTKYNEKFKGKATLTSDKSSSTAYME 104 (291)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEE--EEETTTTEEEECGGGBTTBCEEEEGGGTEEEEE
T ss_pred EcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEE--EEecCCCccccCcccCCCEEEEEeCCCCEEEEE
Confidence 345678899999999999998765 5789999853 1110000 0000000000011111222221 135799
Q ss_pred EeecccCCCceEEEEEEEeCC-c---ceeeceEEEEEec----------------CCeec-cCCCcceecCCcEEEEeee
Q psy14532 78 IENVQKDHDRGVYWCTATNKQ-G---RSSSQNVHISVTG----------------APFVR-PMGNVSAIAGEPLYLGCPV 136 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~-~---~~~~~~~~l~v~~----------------~~~~~-~~~~~~~~~g~~~~l~C~~ 136 (258)
|.++ +.+|+|.|.|.+.+.. + ........|.|.. .+.+. .+....+.+|+.++|.|.+
T Consensus 105 I~~v-~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 183 (291)
T 2gki_A 105 LSSL-TSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKS 183 (291)
T ss_dssp ECSC-CGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEE
T ss_pred ECcC-CHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEc
Confidence 9999 9999999999999874 1 1112345677765 12222 2334568899999999999
Q ss_pred CcccCc------eEEEEeCC--cccC------------CCcceEEec---CCeEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 137 AGYPIE------SITWQKGV--QQLP------------LNRRQKVFP---NGTLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 137 ~~~~~~------~i~W~~~~--~~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
.+.+.+ .+.|+++. .... ...++.... ..+|.|.++.. +|+|.|+|.+.+......
T Consensus 184 ~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~~~~~~~f 262 (291)
T 2gki_A 184 SQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQA-EDLAVYYCKQSYYHMYTF 262 (291)
T ss_dssp SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEEEEEEEETTEEEE
T ss_pred CCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCH-HHCEEEEEEEccCCceEE
Confidence 887654 89999963 2211 012232211 23699999997 999999999998532122
Q ss_pred cceEEEEeecCCc
Q psy14532 194 SQNVHISVTVPPK 206 (258)
Q Consensus 194 ~~~~~l~v~~~p~ 206 (258)
..-..|.|...+.
T Consensus 263 g~gt~l~v~~~~~ 275 (291)
T 2gki_A 263 GSGTKLEIKHHHH 275 (291)
T ss_dssp CCCEEEEEECC--
T ss_pred cCCEEEEEEeeEc
Confidence 2334555555443
No 198
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.85 E-value=2.5e-20 Score=139.39 Aligned_cols=181 Identities=14% Similarity=0.171 Sum_probs=112.5
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCccccceecccceeeccccc-cceeee----eCCc
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLN-RRQKVF----PNGT 75 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~ 75 (258)
+.+...+..+.+.+|++|+|.|.+. .+.+.+.|+|. +...... ... ..........+. .|..+. .+++
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~---~~~-~~~~~~~~~~~~~~R~~~~~~~~~~~s 101 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFL---IYF-QGTGAADDSGLPNDRFFAVRPEGSVST 101 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEE---EEE-ETTEEEECTTCCSTTEEEECTTSSSEE
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEE---EEE-CCCCccccCCCccCcEEEEecCCCEEE
Confidence 4556677788899999999999976 56779999983 2211100 000 000000111111 222222 2567
Q ss_pred EEEeecccCCCceEEEEEEEeC-CcceeeceEEEEEec------CCeec--cCCCcceecCCcEEEEeeeCcccCc--eE
Q psy14532 76 LLIENVQKDHDRGVYWCTATNK-QGRSSSQNVHISVTG------APFVR--PMGNVSAIAGEPLYLGCPVAGYPIE--SI 144 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~-~~~~~~~~~~l~v~~------~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~--~i 144 (258)
|.|.++ +.+|+|.|+|.+.+. ..........|.|.. +|.+. .+....+..|+.++|.|.+.+.+++ .+
T Consensus 102 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v 180 (268)
T 3pl6_D 102 LKIQRT-ERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 180 (268)
T ss_dssp EEECSC-CGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred EEECCC-CcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEE
Confidence 999999 999999999999974 222222555677765 33222 2233345568999999999885544 89
Q ss_pred EEEeCCcccCCCcceEE--------ecC------CeEEEEecccCCC-CcEEEEEEEeCCC
Q psy14532 145 TWQKGVQQLPLNRRQKV--------FPN------GTLLIENVQKDHD-RGVYWCTATNKQG 190 (258)
Q Consensus 145 ~W~~~~~~~~~~~~~~~--------~~~------~~l~i~~~~~~~~-~g~y~C~~~~~~~ 190 (258)
.|++++..+........ ..+ ..|.|..... +| +|.|+|.|.|...
T Consensus 181 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~-~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 181 SWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFW-QNPRNHFRCQVQFYGL 240 (268)
T ss_dssp EEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHH-SCTTCEEEEEEEECCB
T ss_pred EEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHh-ccCCCEEEEEEEcCCC
Confidence 99999887754321110 012 2356666655 55 9999999999754
No 199
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.85 E-value=5.9e-20 Score=137.35 Aligned_cols=178 Identities=17% Similarity=0.295 Sum_probs=111.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecC-----CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee---
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNP-----TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF--- 71 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~-----~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 71 (258)
.+.+...+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. ..... ....... ....+..|....
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~------l~~~~~~-~~~~~~~r~~~~~~~ 87 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKV------LIYKVSN-RVSGVPDRFSGSGSG 87 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEE------EEETTTE-ECTTSCTTEEEEEET
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEE------EEEecCC-CCCCCcccEEEEcCC
Confidence 35567778889999999999999998765 4789999853 11100 0000000 000011122211
Q ss_pred eCCcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCe------------------------eccCCCcceecC
Q psy14532 72 PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF------------------------VRPMGNVSAIAG 127 (258)
Q Consensus 72 ~~~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~------------------------~~~~~~~~~~~g 127 (258)
.+.+|.|.++ +.+|+|.|+|.+.+..+........|.|...+. +..+....+.+|
T Consensus 88 ~~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G 166 (268)
T 1x9q_A 88 TDFTLKINRV-EAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPG 166 (268)
T ss_dssp TEEEEEESSC-CGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTT
T ss_pred CEEEEEECCC-ChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCC
Confidence 2347999999 999999999999987543222345566654321 112334578889
Q ss_pred CcEEEEeeeCccc--CceEEEEeCC--ccc-------------------CCCcceEEec-----CCeEEEEecccCCCCc
Q psy14532 128 EPLYLGCPVAGYP--IESITWQKGV--QQL-------------------PLNRRQKVFP-----NGTLLIENVQKDHDRG 179 (258)
Q Consensus 128 ~~~~l~C~~~~~~--~~~i~W~~~~--~~~-------------------~~~~~~~~~~-----~~~l~i~~~~~~~~~g 179 (258)
+.++|.|.+.+.+ .+.+.|+++. ..+ ....++.+.. ..+|.|.+++. +|+|
T Consensus 167 ~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~-~DsG 245 (268)
T 1x9q_A 167 GAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRV-EDTG 245 (268)
T ss_dssp CCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG-GGCE
T ss_pred CcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCH-HHCE
Confidence 9999999998765 3789999853 211 0122333322 24699999997 9999
Q ss_pred EEEEEEEeC
Q psy14532 180 VYWCTATNK 188 (258)
Q Consensus 180 ~y~C~~~~~ 188 (258)
.|+|.+.+.
T Consensus 246 ~Y~C~a~~~ 254 (268)
T 1x9q_A 246 IYYCTGASY 254 (268)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEccC
Confidence 999999874
No 200
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.85 E-value=1.1e-20 Score=145.37 Aligned_cols=176 Identities=13% Similarity=0.172 Sum_probs=108.5
Q ss_pred eeeecCCCceEEEEEEeecCCC--eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCce
Q psy14532 11 QQTLQPGPPVSLKCIATGNPTP--HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRG 88 (258)
Q Consensus 11 ~~~~~~g~~v~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G 88 (258)
...+.+|+.+.|.|.+.+.+.+ .+.|++++..+..... ..... ...........|.|... ..+|.|
T Consensus 126 ~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~--~~~~~---------~~~~~~~~~s~L~i~~~-~~d~~g 193 (327)
T 2wng_A 126 AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQT--NVDPV---------GESVSYSIHSTAKVVLT-REDVHS 193 (327)
T ss_dssp SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEE--EEECS---------SCCSCEEEEEEEEEECC-TTGGGC
T ss_pred ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccccc--ccccc---------cCCCceEEEEEEEEech-hcCcCc
Confidence 3668899999999999987655 8999999988765421 00000 00001111235667766 677789
Q ss_pred EEEEEEEeCCcce--eeceEEE--EEecCCeeccCCCcceecCCcEEEEeeeCccc-Cc-eEEEEeCCcccCCCc--ceE
Q psy14532 89 VYWCTATNKQGRS--SSQNVHI--SVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYP-IE-SITWQKGVQQLPLNR--RQK 160 (258)
Q Consensus 89 ~Y~C~~~~~~~~~--~~~~~~l--~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~-~i~W~~~~~~~~~~~--~~~ 160 (258)
.|+|.+.+..+.. ......+ .+..+|.+...... +.+|+.+.|.|.+.+.+ ++ .+.|++++..+.... ...
T Consensus 194 ~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~-~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 272 (327)
T 2wng_A 194 QVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP-VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVT 272 (327)
T ss_dssp EEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC-CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCE
T ss_pred eEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC-cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceE
Confidence 9999999977653 1123333 23444443332222 67899999999999854 44 899999998765321 122
Q ss_pred EecCC------eEEEEecccCCCCcEEEEEEEeCCCCCccceEEEE
Q psy14532 161 VFPNG------TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHIS 200 (258)
Q Consensus 161 ~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~ 200 (258)
...++ .|.|..+.. +|.|.|+|.|.|..+...++.+.+.
T Consensus 273 ~~~~g~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~~~~~s~~~~~~ 317 (327)
T 2wng_A 273 ENKDGTYNWMSWLLVNVSAH-RDDVKLTCQVEHDGQPAVSKSHDLK 317 (327)
T ss_dssp ECTTSCEEEEEEEEC--------CCEEEEEEEETTCCCEEEEEECC
T ss_pred ECCCCcEEEEEEEEEccccc-cCCCEEEEEEEeCCCCCchhheEEE
Confidence 22333 366777776 8999999999999876555555443
No 201
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.85 E-value=1.6e-19 Score=131.17 Aligned_cols=178 Identities=18% Similarity=0.272 Sum_probs=109.7
Q ss_pred eeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceec---ccceeeccccccceeeeeC-----C
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRI---GEARVQQLPLNRRQKVFPN-----G 74 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~ 74 (258)
..+..+.+.+|++|+|.|.+.+. +...+.|+|.. ...... ..... +........+..|..+..+ .
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 81 (221)
T 3m8o_H 5 VESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWV---GRIKRNAESDATAYAASMRGRLTISRDDSKNTA 81 (221)
T ss_dssp EEESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEE---EEECCGGGTTCEEECGGGTTSEEEEEEGGGTEE
T ss_pred EccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEE---EEEcccccCcccccCccccccEEEEecCCCCEE
Confidence 45566889999999999999864 35689999842 111000 00000 0001111122233333322 3
Q ss_pred cEEEeecccCCCceEEEEEEEeCCc-ceeeceEEEEEec----CCeec-cCCCcceecCCcEEEEeeeCc-ccC--ceEE
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQG-RSSSQNVHISVTG----APFVR-PMGNVSAIAGEPLYLGCPVAG-YPI--ESIT 145 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~~~l~C~~~~-~~~--~~i~ 145 (258)
+|.|.++ +.+|+|.|.|.+.+... ........|.|.. +|.+. ...... ..|+.+.|.|.+.+ .|. +.+.
T Consensus 82 sL~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~ 159 (221)
T 3m8o_H 82 FLQMNSL-KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVT 159 (221)
T ss_dssp EEEECSC-CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEE
T ss_pred EEEECCC-CHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEE
Confidence 6999999 99999999999988641 2222445677752 22222 112222 68899999999988 665 4899
Q ss_pred EEeCCcccCCCcce--------EEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 146 WQKGVQQLPLNRRQ--------KVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 146 W~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
|++++..+...... .....+.|.|.+... +|+|.|+|.|.+..+
T Consensus 160 W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~ytC~v~~~~~ 211 (221)
T 3m8o_H 160 WSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQC-LAGKSVTCHVKHYTN 211 (221)
T ss_dssp ESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGS-CTTCEEEEEEEETTS
T ss_pred EEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHc-CCCCeEEEEEEECCC
Confidence 99988776321110 011123578888776 899999999999864
No 202
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.85 E-value=4.4e-20 Score=135.80 Aligned_cols=181 Identities=14% Similarity=0.185 Sum_probs=113.7
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee----eCCcE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF----PNGTL 76 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l 76 (258)
+.+...+..+.+.+|++|+|.|.+.+ +.+.+.|+|.. ...... .............+..|..+. .+.+|
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~----~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL 77 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFL----IQHYEKVERDKGFLPSRFSVQQFDDYHSEM 77 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEE----EEEETTEEEEECSCCTTEEEEECTTSCEEE
T ss_pred cccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEE----EEEcCCccccCcccCCeEEEEeCCCCEEEE
Confidence 46677888899999999999999875 67799999832 111000 000000001111112222222 24579
Q ss_pred EEeecccCCCceEEEEEEEeC--CcceeeceEEEEEec------CCeecc--CCCcceecCCcEEEEeeeCc-ccCc-eE
Q psy14532 77 LIENVQKDHDRGVYWCTATNK--QGRSSSQNVHISVTG------APFVRP--MGNVSAIAGEPLYLGCPVAG-YPIE-SI 144 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~--~~~~~~~~~~l~v~~------~~~~~~--~~~~~~~~g~~~~l~C~~~~-~~~~-~i 144 (258)
.|.++ +.+|+|.|+|.+.+. ..........|.|.. +|.+.. +....+..|+.+.|.|.+.+ .|.+ .+
T Consensus 78 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 156 (240)
T 3q5y_A 78 NMSAL-ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVEL 156 (240)
T ss_dssp EECSC-CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred EECcC-ChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEE
Confidence 99999 999999999999832 222222455677763 232221 23334556899999999988 5655 79
Q ss_pred EEEeCCcccCCCcce----EEecCC------eEEEEecccCCC-CcEEEEEEEeCCC
Q psy14532 145 TWQKGVQQLPLNRRQ----KVFPNG------TLLIENVQKDHD-RGVYWCTATNKQG 190 (258)
Q Consensus 145 ~W~~~~~~~~~~~~~----~~~~~~------~l~i~~~~~~~~-~g~y~C~~~~~~~ 190 (258)
.|++++..+...... ....++ .|.|..... +| +|.|+|.|.|...
T Consensus 157 ~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 157 SWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFW-HNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHH-SCTTCEEEEEEEECCB
T ss_pred EEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHh-ccCCCEEEEEEEcCCC
Confidence 999999887543221 112233 377777776 66 7799999998754
No 203
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.85 E-value=4.2e-20 Score=136.34 Aligned_cols=180 Identities=14% Similarity=0.189 Sum_probs=113.0
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee----eCCcEE
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF----PNGTLL 77 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~ 77 (258)
.+...+..+.+.+|++|+|.|.+.+.+.+.+.|+|.. ...... .......... ..+..|..+. .+.+|.
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~----~~~~~~~~~~-~~~~~R~~~~~~~~~~~sL~ 77 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLL----FYSVGIGQIS-SEVPQNLSASRPQDRQFILS 77 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEE----EEESSTTCCB-CSSCCSSEEEEEETTEEEEE
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEE----EEECCCcccC-CccCCcEEEEecCCCEEEEE
Confidence 4667788899999999999999998888899999832 111000 0000000000 1112222222 234799
Q ss_pred EeecccCCCceEEEEEEEeCC-----cceeeceEEEEEec------CCeecc--CCCcceecCCcEEEEeeeCcc-cCc-
Q psy14532 78 IENVQKDHDRGVYWCTATNKQ-----GRSSSQNVHISVTG------APFVRP--MGNVSAIAGEPLYLGCPVAGY-PIE- 142 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~-----~~~~~~~~~l~v~~------~~~~~~--~~~~~~~~g~~~~l~C~~~~~-~~~- 142 (258)
|.++ +.+|+|.|+|.+.+.. .........|.|.. +|.+.. +....+..|+.+.|.|.+.+. |++
T Consensus 78 I~~v-~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~ 156 (245)
T 3nfj_J 78 SKKL-LLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHV 156 (245)
T ss_dssp ESSC-CGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred ECCC-ChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCE
Confidence 9999 9999999999999832 22222455677765 332221 222334558999999999884 444
Q ss_pred eEEEEeCCcccCCCcceEEe--------cC------CeEEEEecccCCC-CcEEEEEEEeCCC
Q psy14532 143 SITWQKGVQQLPLNRRQKVF--------PN------GTLLIENVQKDHD-RGVYWCTATNKQG 190 (258)
Q Consensus 143 ~i~W~~~~~~~~~~~~~~~~--------~~------~~l~i~~~~~~~~-~g~y~C~~~~~~~ 190 (258)
.+.|++++..+......... .+ ..|.|..... +| +|.|+|.|.|...
T Consensus 157 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~~YtC~v~~~~~ 218 (245)
T 3nfj_J 157 ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFW-QNPRNHFRCQVQFYGL 218 (245)
T ss_dssp EEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHH-TCTTCEEEEEEEECCB
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHh-ccCCCeEEEEEEECCC
Confidence 78999999877543221100 12 2466766665 56 7799999999754
No 204
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.85 E-value=4.2e-21 Score=142.44 Aligned_cols=162 Identities=17% Similarity=0.252 Sum_probs=92.3
Q ss_pred cCCCceEEEEEEEeCCcceeeceEEEEEecCCe-eccCCCcceecCCcEEEEeeeCccc-----CceEEEEeCC--ccc-
Q psy14532 83 KDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF-VRPMGNVSAIAGEPLYLGCPVAGYP-----IESITWQKGV--QQL- 153 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~-----~~~i~W~~~~--~~~- 153 (258)
+..|+|.|+|.+. +... ..+.+.+...+. ...+....+.+|+.++|.|.+.+.+ .+.+.|++++ ..+
T Consensus 12 ~~~dsg~Y~C~a~---g~~~-~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~ 87 (254)
T 2c1o_A 12 RPGTSVKLSCKAS---GYSF-TNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPK 87 (254)
T ss_dssp ------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCE
T ss_pred cCCccEEEEEcCc---hhhh-hhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCce
Confidence 7889999999998 3222 223333333333 3335667889999999999998877 3899999843 221
Q ss_pred -----------CCCcceEEecC---CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec---CCccccCCCCCcc
Q psy14532 154 -----------PLNRRQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV---PPKIAPFEFQPDL 216 (258)
Q Consensus 154 -----------~~~~~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~ 216 (258)
....++.+... ..|.|.++.. +|+|.|+|.+.+..+........|.|.. +|.+...+.....
T Consensus 88 ~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~ 166 (254)
T 2c1o_A 88 RLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEA-EDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQ 166 (254)
T ss_dssp EEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHH
T ss_pred EEEEeccccCCCccceEEEecCCCEEEEEECcCCc-ccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhh
Confidence 11133333322 2799999998 9999999999987543233344566653 4544443333334
Q ss_pred CCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 217 HSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 217 ~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
..|+.++|.|.+.+.+|+ +.|.|+++|+.+..+
T Consensus 167 ~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 200 (254)
T 2c1o_A 167 LTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 200 (254)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTT
T ss_pred ccCCcEEEEEEEecccCCCcEEEEEECCCcccCc
Confidence 468899999999544555 579999999988765
No 205
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.85 E-value=2e-20 Score=134.47 Aligned_cols=175 Identities=12% Similarity=0.179 Sum_probs=109.8
Q ss_pred Ccc-eeeceeee-ecCCCceEEEEEEeecC----CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcE
Q psy14532 3 PQL-IYKFIQQT-LQPGPPVSLKCIATGNP----TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTL 76 (258)
Q Consensus 3 p~~-~~~~~~~~-~~~g~~v~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 76 (258)
|.+ +..|.... +.+|++++|.|.+.+.+ ...|.|+|++..+...... .. ..+.. ......++|
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~----~~------~~~~~-~~~~~~~~L 70 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTK----PR------EEQFN-STFRSVSEL 70 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEE----CC------CEETT-TEEEEEEEE
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccC----CC------cCcCC-CcEEEEEEE
Confidence 444 44555444 89999999999998874 2489999998765432100 00 00000 011223579
Q ss_pred EEeecccCCCceEEEEEEEeCCccee-eceEEE--EEecCCeecc-CCCcceecCCcEEEEeeeCcc-cC-ceEEEEeCC
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGRSS-SQNVHI--SVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGY-PI-ESITWQKGV 150 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~~~-~~~~~l--~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~i~W~~~~ 150 (258)
.|.++ +.+|+|.|+|.+.+..+... ...+.+ .+..+|.+.. ........|+.+.|.|.+.|. |. +.+.|++++
T Consensus 71 ~I~~~-~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g 149 (207)
T 2vol_A 71 PIMHQ-DWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNG 149 (207)
T ss_dssp ECCHH-HHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred EEehh-HcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECC
Confidence 99999 99999999999999876432 123332 3334444332 222223358999999999884 54 489999999
Q ss_pred cccCCCcc--eEEecCCe------EEEEecccCCCCcEEEEEEEeCCC
Q psy14532 151 QQLPLNRR--QKVFPNGT------LLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 151 ~~~~~~~~--~~~~~~~~------l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
..+..... .....+++ |.|..... +|.|.|+|.|.|...
T Consensus 150 ~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~-~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 150 QPAENYKNTQPIMDTDGSYFVYSKLNVQKSNW-EAGNTFTCSVLHEGL 196 (207)
T ss_dssp EECSCEEECCCEECTTSCEEEEEEEEEEHHHH-SSCCEEEEEEECTTS
T ss_pred EeccCcccCCceECCCCCEEEEEEEEECHHHc-CCCCEEEEEEECCCC
Confidence 87653321 12234444 34444443 689999999999754
No 206
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.84 E-value=1e-20 Score=138.66 Aligned_cols=177 Identities=15% Similarity=0.210 Sum_probs=110.3
Q ss_pred cceeeceeeeecCCCceEEEEEEeecC-CC-eEEEeeCC--EeCcCCccccceecccceeeccccccceeee---eCCcE
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNP-TP-HISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTL 76 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~-~~-~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l 76 (258)
.+.. +..+.+.+|++++|.|.+.+.+ .+ .+.|+|++ ...... .... ......+..+.... .+.+|
T Consensus 22 ~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~------~~~~-~~~~~~~~~r~~~~~~~~~~~L 93 (234)
T 2j6e_L 22 VLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLL------IYRN-NQRPSGVPDRFSGSKSGTSASL 93 (234)
T ss_dssp CCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEE------EBTT-TBCCSSSCTTEEEEEETTEEEE
T ss_pred EEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEE------EECc-cccCCCccccEEEEecCCeEEE
Confidence 3444 7778899999999999998753 34 79999863 211000 0000 00000111111111 23479
Q ss_pred EEeecccCCCceEEEEEEEeCCcc--eeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cC-ceEEEE
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGR--SSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PI-ESITWQ 147 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~i~W~ 147 (258)
.|.++ +.+|+|.|+|.+.+..+. .......|.|.. +|.+.. ........|+.+.|.|.+.+. |+ +.+.|+
T Consensus 94 ~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 172 (234)
T 2j6e_L 94 AISGL-RSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWK 172 (234)
T ss_dssp EEESC-CSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEE
T ss_pred EECCC-CHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEE
Confidence 99999 999999999999988762 222344556632 232222 222233468899999999885 43 489999
Q ss_pred eCCcccCCCcce---EE------ecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 148 KGVQQLPLNRRQ---KV------FPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 148 ~~~~~~~~~~~~---~~------~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+++..+...... .. ...+.|.|.++.. +|.|.|+|.|.|...
T Consensus 173 k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~ 223 (234)
T 2j6e_L 173 ADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQW-KSHRSYSCQVTHEGS 223 (234)
T ss_dssp ETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGT-TTSCCEEEEEEBTTB
T ss_pred ECCEECCCCccccCceECCCCCEEEEEEEEECHHHc-CCCCeEEEEEEeCCC
Confidence 999877543211 00 1123577888876 899999999999764
No 207
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.84 E-value=2.6e-20 Score=134.23 Aligned_cols=177 Identities=19% Similarity=0.292 Sum_probs=109.7
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeC--CEeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +.....-. .... .........+..|..+.. +.+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~--~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 81 (210)
T 3d9a_H 5 QESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMG--YVSY-SGSTYYNPSLKSRISITRDTSKNQYYLD 81 (210)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEE--EECT-TSCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred ecCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEE--EEcC-CCCeEECcccCceEEEEecCCCCEEEEE
Confidence 346778899999999999998764 478999985 22111000 0000 000000111222322221 23799
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eEEEEeCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SITWQKGV 150 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W~~~~ 150 (258)
|.++ +.+|+|.|+|.+.+.. .......|.|.. +|.+.. .....+..|+.+.|.|.+.+. |.+ .+.|++++
T Consensus 82 I~~v-~~~D~G~Y~C~~~~~~--~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 158 (210)
T 3d9a_H 82 LNSV-TTEDTATYYCANWDGD--YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 158 (210)
T ss_dssp ECSC-CGGGCEEEEEEETTSS--CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred ECCC-CcccCEEEEEEEecCc--ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCC
Confidence 9999 9999999999998863 111345667753 232221 223446789999999999886 877 99999988
Q ss_pred cccCCCcc--e----EEecCCeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 151 QQLPLNRR--Q----KVFPNGTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 151 ~~~~~~~~--~----~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
..+..... . .....+.|.|.++.. ++ |.|+|.|.|..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~~-g~Y~C~a~n~~~~ 203 (210)
T 3d9a_H 159 LSSGVHTFPAVLQSDLYTLSSSVTVPSSTW-PS-ETVTCNVAHPASS 203 (210)
T ss_dssp BCTTEEECCCEEETTEEEEEEEEEEEGGGT-TT-SCCEEEEEEGGGT
T ss_pred cccceEEcCCccCCCcEEEEEEEEEcHHHc-CC-CcEEEEEEeCCCC
Confidence 75421111 1 111223578887775 66 9999999998653
No 208
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.84 E-value=9.9e-20 Score=129.25 Aligned_cols=153 Identities=16% Similarity=0.209 Sum_probs=107.2
Q ss_pred eeecCCCceEEEEEEeecCCC--eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceE
Q psy14532 12 QTLQPGPPVSLKCIATGNPTP--HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGV 89 (258)
Q Consensus 12 ~~~~~g~~v~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~ 89 (258)
+.+.+|++++|.|.+ +.|.+ .|.|++.+..+. ... .......|.|.++ +.+|+|.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~------~~~---------------~~~~~~~L~I~~v-~~~d~G~ 73 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSLG------AVQ---------------SDTGRSVLTVRNA-SLSAAGT 73 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTC------CEE---------------EESSEEEEEECSC-CGGGCEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeecccccC------cEE---------------ecCCccEEEECcc-CcccCce
Confidence 589999999999999 77777 999998543220 000 0112457999999 9999999
Q ss_pred EEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcc-cC----ceEEEEeCCcccCCCcceE--E-
Q psy14532 90 YWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGY-PI----ESITWQKGVQQLPLNRRQK--V- 161 (258)
Q Consensus 90 Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~----~~i~W~~~~~~~~~~~~~~--~- 161 (258)
|.|.+.+..+... ..+.|.|+.+|............|+.+ |.|.+.+. |. ++|.|++++..+....... .
T Consensus 74 Y~C~a~n~~~~~~-~~~~ltV~~~P~~~~i~~~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~ 151 (210)
T 1gsm_A 74 RVCVGSCGGRTFQ-HTVQLLVYAFPNQLTVSPAALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQ 151 (210)
T ss_dssp EEEEEEETTEEEE-EEEEEEEEBCCSEEEEESSSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEE
T ss_pred EEEEEEeCCCceE-EEEEEEEEecCCCcEEccceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEccccccccccee
Confidence 9999999877655 889999998875433212356678888 99999874 63 4899999998885432101 1
Q ss_pred --------ecCCeEEE------EecccCCCCcEEEEEEEeCCC
Q psy14532 162 --------FPNGTLLI------ENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 162 --------~~~~~l~i------~~~~~~~~~g~y~C~~~~~~~ 190 (258)
....++.+ ... .+++.+.|+|+|.+...
T Consensus 152 ~~~~~~~~~~~~~~~vts~~~~~~~-~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 152 EEEEEPQGDEDVLFRVTERWRLPPL-GTPVPPALYCQATMRLP 193 (210)
T ss_dssp ECTTCCSSCCCCCEEEEEEEECCCC-CSSCCSEEEEEEEEEET
T ss_pred cccccccCCcceEEEEEEEEeecCC-cccCCceEEEEEEeeCC
Confidence 01222222 233 34777899999998763
No 209
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.84 E-value=8e-20 Score=134.80 Aligned_cols=182 Identities=16% Similarity=0.181 Sum_probs=113.1
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCccccceecccceeeccccc-cceeee----eCC
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLN-RRQKVF----PNG 74 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~ 74 (258)
.+.+...+..+.+.+|++|+|.| ..+.+.+.+.|+|. +...... .... .........+. .|..+. .+.
T Consensus 2 ~~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~---~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~ 76 (245)
T 4ei6_B 2 GPKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFL---VNFY-NGKVMEKSKLFKDQFSVERPDGSYF 76 (245)
T ss_dssp CCCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEE---EEEE-TTEEEEECTTCCTTEEEECCTTSCE
T ss_pred CcceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEE---EEEC-CCceeccCCCccCCEEEEeccCceE
Confidence 35677888889999999999999 66667889999982 1111000 0000 00000001111 122221 234
Q ss_pred cEEEeecccCCCceEEEEEEEeCC---cceeeceEEEEEec------CCeec--cCCCcceecCCcEEEEeeeCc-ccCc
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQ---GRSSSQNVHISVTG------APFVR--PMGNVSAIAGEPLYLGCPVAG-YPIE 142 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~---~~~~~~~~~l~v~~------~~~~~--~~~~~~~~~g~~~~l~C~~~~-~~~~ 142 (258)
+|.|.++ +.+|+|.|+|.+.+.. .........|.|.. +|.+. .+....+..|+.+.|.|.+.+ .|.+
T Consensus 77 sL~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~ 155 (245)
T 4ei6_B 77 TLKIQPT-ALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 155 (245)
T ss_dssp EEEECSC-CGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEECCC-CHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCC
Confidence 7999999 9999999999998632 22222455677763 33222 123334556999999999988 4444
Q ss_pred -eEEEEeCCcccCCCcceEEe--------cCC------eEEEEecccCCC-CcEEEEEEEeCCC
Q psy14532 143 -SITWQKGVQQLPLNRRQKVF--------PNG------TLLIENVQKDHD-RGVYWCTATNKQG 190 (258)
Q Consensus 143 -~i~W~~~~~~~~~~~~~~~~--------~~~------~l~i~~~~~~~~-~g~y~C~~~~~~~ 190 (258)
.+.|++++..+......... .++ .|.|..... +| +|.|+|.|.|...
T Consensus 156 ~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 156 VELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFW-QNPRNHFRCQVQFYGL 218 (245)
T ss_dssp EEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHH-SCTTCEEEEEEEECCB
T ss_pred eEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHh-ccCCCeEEEEEEECCC
Confidence 89999999877643221110 122 367777766 66 8999999999753
No 210
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.84 E-value=5.2e-20 Score=134.06 Aligned_cols=179 Identities=16% Similarity=0.254 Sum_probs=109.7
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. ..+..-. .....+........+..|..+.. +.+|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (225)
T 1op3_H 5 VESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVA--SISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQ 82 (225)
T ss_dssp EEECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEE--EECGGGCCEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred EcCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEE--EEccCCCccccCcccCCceEEEecCCCCEEEEE
Confidence 345667899999999999998765 6789999853 2110000 00000000000111222322222 35799
Q ss_pred EeecccCCCceEEEEEEEeCCc-----c--eeeceEEEEEecC----Ceecc-CCCcceecCCcEEEEeeeCcc-cCc-e
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG-----R--SSSQNVHISVTGA----PFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-S 143 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~-----~--~~~~~~~l~v~~~----~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~ 143 (258)
|.++ +.+|+|.|.|.+.+..+ . .....+.|.|... |.+.. .+...+..|+.+.|.|.+.+. |.+ .
T Consensus 83 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 161 (225)
T 1op3_H 83 MHKM-RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 161 (225)
T ss_dssp ECSC-CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCE
T ss_pred ECCC-ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeE
Confidence 9999 99999999999998754 1 1224567777652 32221 222235679999999999875 766 9
Q ss_pred EEEEeCCcccCCCc-ceEEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 144 ITWQKGVQQLPLNR-RQKVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 144 i~W~~~~~~~~~~~-~~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+.|++++..+.... ......+ +.|.|.++.. +| |.|+|.|.|...
T Consensus 162 v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 162 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 213 (225)
T ss_dssp EECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGT-TC-CCCCEEEEEGGG
T ss_pred EEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhc-CC-CcEEEEEEcCCC
Confidence 99999886532111 0011122 2478887775 67 999999999643
No 211
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.83 E-value=5.9e-20 Score=138.77 Aligned_cols=167 Identities=16% Similarity=0.150 Sum_probs=114.6
Q ss_pred eeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCceEEE
Q psy14532 12 QTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYW 91 (258)
Q Consensus 12 ~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~ 91 (258)
+.+.+|+++.|.|.+. .|.+.+.|++.+...... ... ..... + + ...|+|.|+
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~---~~~-------------------~~~~~-~--~-~~~d~G~Y~ 157 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP---VPY-------------------DHQRG-F--S-GIFEDRSYI 157 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC---CCE-------------------ETTTE-E--E-ECCCSSEEE
T ss_pred EEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc---eee-------------------cCCcC-e--e-eeccCcEEE
Confidence 5688999999999998 677889999864211111 000 00011 1 1 356999999
Q ss_pred EEEEeCCcceeeceEEEEEec--CCeec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc--ceEE-----
Q psy14532 92 CTATNKQGRSSSQNVHISVTG--APFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR--RQKV----- 161 (258)
Q Consensus 92 C~~~~~~~~~~~~~~~l~v~~--~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~--~~~~----- 161 (258)
|.+.+..+...+..+.|.|.. ++.+. .+....+.+|+.+.|.|.+.+.|.+.+.|++++....... ....
T Consensus 158 C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
T 3mjg_X 158 CKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMP 237 (289)
T ss_dssp EEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTT
T ss_pred EEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcc
Confidence 999987766555666777765 33222 2344668899999999999999999999998765433211 1111
Q ss_pred -ecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcc
Q psy14532 162 -FPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKI 207 (258)
Q Consensus 162 -~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~ 207 (258)
...+.|.|.++.. +|+|.|+|.|.|..| .......|.|...+..
T Consensus 238 ~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G-~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 238 YHIRSILHIPSAEL-EDSGTYTCNVTESVN-DHQDEKAINITVVESG 282 (289)
T ss_dssp TEEEEEEEESSCCS-SCCEEEEEEEEETTT-TEEEEEEEEEEEEC--
T ss_pred eEEEEEEEEcccCh-hhCcEEEEEeecCCC-CceeEEEEEEEEEecC
Confidence 1235799999997 999999999999998 4567777888766543
No 212
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.83 E-value=6.8e-20 Score=133.00 Aligned_cols=177 Identities=21% Similarity=0.362 Sum_probs=110.2
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--Ee---CcCCccccceeccc-ceeeccccccceeeee-----C
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YP---LAGDRHENKNRIGE-ARVQQLPLNRRQKVFP-----N 73 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~ 73 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|++ .. +....... +. .......+..|..+.. +
T Consensus 5 ~~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~R~~~~~~~~~~~ 80 (220)
T 1pz5_B 5 EESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKS----NNYATHYAESVKGRFTISRDDSKSS 80 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGG----GTTCEEECGGGTTTEEEEEEGGGTE
T ss_pred eccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCC----CccccccCcccCCcEEEEEeCCCCe
Confidence 446778899999999999998765 6789999853 11 10000000 00 0000111222322221 2
Q ss_pred CcEEEeecccCCCceEEEEEEEeCCcc--eeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eE
Q psy14532 74 GTLLIENVQKDHDRGVYWCTATNKQGR--SSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SI 144 (258)
Q Consensus 74 ~~l~i~~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i 144 (258)
.+|.|.++ +.+|+|.|.|.+.+..+. .......|.|.. +|.+.. .....+.+|+.+.|.|.+.+. |.+ .+
T Consensus 81 ~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 159 (220)
T 1pz5_B 81 VYLQMNNL-RAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTV 159 (220)
T ss_dssp EEEEECSC-CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEE
T ss_pred EEEEEccC-CHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEE
Confidence 37999999 999999999999987532 111445677763 232222 223345689999999999886 888 99
Q ss_pred EEEeCCcccC---CCcc---eEEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 145 TWQKGVQQLP---LNRR---QKVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 145 ~W~~~~~~~~---~~~~---~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.|++++.... .... ......+.|.|.++.. ++ |.|+|.|.|..+
T Consensus 160 ~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~~-g~Y~C~a~n~~~ 209 (220)
T 1pz5_B 160 KWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTW-PS-QTVICNVAHPAS 209 (220)
T ss_dssp EEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGT-TT-SCCEEEEEEGGG
T ss_pred EEecCCcccceEEcCCcccCCeEEEEEEEEEcchhc-CC-ceEEEEEEECCc
Confidence 9999876411 0000 1112234577877765 56 999999999876
No 213
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.83 E-value=6.7e-20 Score=129.00 Aligned_cols=129 Identities=22% Similarity=0.354 Sum_probs=108.1
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEec-----CCeEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFP-----NGTLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.......... .+.|.|.++.. +|+|.|+|.+.+..+...
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~~~~~~~~ 87 (182)
T 1rhf_A 9 PVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVER-SDAGRYWCQVEDGGETEI 87 (182)
T ss_dssp CEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCG-GGCEEEEEEESSCTTCEE
T ss_pred CcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCc-ccCeEEEEEEEcCCCcEE
Confidence 445678899999999999988889999999998887665444322 25799999997 999999999999866556
Q ss_pred cceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEecccc
Q psy14532 194 SQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSA 249 (258)
Q Consensus 194 ~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~ 249 (258)
+..+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+ .+.|+++|..+...
T Consensus 88 ~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~ 143 (182)
T 1rhf_A 88 SQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEA-VGPPEPVTIVWWRGTTKIGGP 143 (182)
T ss_dssp CCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEE-ECSSSCCEEEEEETTEECSCS
T ss_pred EEEEEEEEecCCeEEecCcceEecCCCEEEEEeEe-cCCCCCCEEEEEcCCeECCCC
Confidence 67889999999988777767788999999999999 588888 99999999998654
No 214
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.83 E-value=2.4e-19 Score=134.77 Aligned_cols=184 Identities=14% Similarity=0.158 Sum_probs=112.2
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeee----eCCc
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVF----PNGT 75 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~ 75 (258)
+.+...+..+.+.+|++|+|.|.+.+.+.+.+.|+|.+ .....- ..... +........+..|..+. .+.+
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~s 101 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLM---ATSNEGSKATYEQGVEKDKFLINHASLTLST 101 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEE---EEEESSSCCCCCSSSCSSSEEEEECSSSEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEE---EEEecCCcceecCCccCCcEEEEeCCCCEEE
Confidence 55677788899999999999999987777899999863 111000 00000 00000000112222222 2347
Q ss_pred EEEeecccCCCceEEEEEEEeCCc-----ceeeceEEEEEec------CCeecc--CCCcceecCCcEEEEeeeCcc-cC
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQG-----RSSSQNVHISVTG------APFVRP--MGNVSAIAGEPLYLGCPVAGY-PI 141 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~~l~v~~------~~~~~~--~~~~~~~~g~~~~l~C~~~~~-~~ 141 (258)
|.|.++ +.+|+|.|+|.+.+..+ ........|.|.. +|.+.. +....+..|+.+.|.|.+.+. |.
T Consensus 102 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~ 180 (279)
T 2wbj_D 102 LTVTSA-HPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 180 (279)
T ss_dssp EEESSC-CGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSS
T ss_pred EEEccC-CccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCC
Confidence 999999 99999999999998421 1112345677764 232221 222334478999999999886 53
Q ss_pred -ceEEEEeCCcccCCCcceE------E--ecCCe------EEEEecccCCCCcEEEEEEEeCCC
Q psy14532 142 -ESITWQKGVQQLPLNRRQK------V--FPNGT------LLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 142 -~~i~W~~~~~~~~~~~~~~------~--~~~~~------l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+.+.|++++..+....... . ..+++ |.|.+....++.|.|+|.|.|...
T Consensus 181 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~ 244 (279)
T 2wbj_D 181 HVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 244 (279)
T ss_dssp CEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCB
T ss_pred CcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCC
Confidence 6999999998775432211 0 12333 555555442357789999999754
No 215
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.83 E-value=4.4e-19 Score=128.98 Aligned_cols=182 Identities=16% Similarity=0.266 Sum_probs=109.6
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. .....-. .....+........+..|..+.. +.+|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (223)
T 1dee_B 5 VESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVA--LISYDESNKYYADSVKGRFTISRDNSKNTLYLQ 82 (223)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEE--EECTTSCCEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEE--EEecCCCccccCcccCCeEEEEecCCCCEEEEE
Confidence 344678899999999999998754 4689999853 1110000 00000000001111223333322 34799
Q ss_pred EeecccCCCceEEEEEEEeCCc----c-eeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eEE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG----R-SSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SIT 145 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~----~-~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i~ 145 (258)
|.++ +.+|+|.|.|.+.+..+ . .....+.|.|.. +|.+.. .+...+..|+.+.|.|.+.+. |.+ .+.
T Consensus 83 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 161 (223)
T 1dee_B 83 MNSL-RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFS 161 (223)
T ss_dssp ECSC-CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEE
T ss_pred ECCC-CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEE
Confidence 9999 99999999999998652 1 122445788863 233221 222335688999999999885 766 999
Q ss_pred EEe-CCcccCCCc---c----eEEecCCeEEEEeccc-CCCCcEEEEEEEeCCCC
Q psy14532 146 WQK-GVQQLPLNR---R----QKVFPNGTLLIENVQK-DHDRGVYWCTATNKQGR 191 (258)
Q Consensus 146 W~~-~~~~~~~~~---~----~~~~~~~~l~i~~~~~-~~~~g~y~C~~~~~~~~ 191 (258)
|++ ++..+.... . -.....+.|.|..... ++|.|.|+|.|.|..+.
T Consensus 162 W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~ 216 (223)
T 1dee_B 162 WKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGN 216 (223)
T ss_dssp EEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCC
T ss_pred eEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCC
Confidence 999 887764310 0 0111123466654431 15789999999998763
No 216
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.83 E-value=1.1e-19 Score=129.45 Aligned_cols=133 Identities=21% Similarity=0.300 Sum_probs=109.0
Q ss_pred eccCCCcceecCCcEEEEeeeC-cccCceEEEEeCCcccCCCc--ceEEe--c--------CCeEEEEecccCCCCcEEE
Q psy14532 116 VRPMGNVSAIAGEPLYLGCPVA-GYPIESITWQKGVQQLPLNR--RQKVF--P--------NGTLLIENVQKDHDRGVYW 182 (258)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~-~~~~~~i~W~~~~~~~~~~~--~~~~~--~--------~~~l~i~~~~~~~~~g~y~ 182 (258)
...+....+.+|+.+.|.|.+. +.|.+.+.|++++..+.... +..+. . .+.|.|.++.. +|+|.|+
T Consensus 6 ~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~ 84 (195)
T 2c5d_C 6 VGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQL-SDTGQYQ 84 (195)
T ss_dssp EECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCS-TTCEEEE
T ss_pred ccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccc-cCCcEEE
Confidence 3445667889999999999998 88889999999998877653 22221 2 35799999997 9999999
Q ss_pred EEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEeccccc
Q psy14532 183 CTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSAM 250 (258)
Q Consensus 183 C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~~ 250 (258)
|.+.+..+...+..+.|.|..+|.+...+....+.+|+.+.|.|.+ .+.|.+ .|.|+++|..+....
T Consensus 85 C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~ 152 (195)
T 2c5d_C 85 CLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQA-QGPPEPVDLLWLQDAVPLATAP 152 (195)
T ss_dssp EEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEE-ECSSCCCEEEEEESSCBSSSST
T ss_pred EEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeEC-CCCCCCCEEEEEECCEeccCCC
Confidence 9999987655566688999998887776667788999999999999 688888 999999999987654
No 217
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.83 E-value=4.3e-19 Score=128.31 Aligned_cols=173 Identities=20% Similarity=0.249 Sum_probs=119.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.| ..+.++.+.+|+++.|.|.+.+.|.+.+.|+|++..+..... .++.+. .....++|.|.++
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~-~~~~~~-------------~~~~~~~L~i~~~ 83 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNY-SNIKIY-------------NTPSASYLEVTPD 83 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSS-CSEEEE-------------EETTEEEEEECCC
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCC-ccEEEe-------------cCCCeeEEEEecC
Confidence 4666 466778899999999999999999999999999988765421 111111 0012457999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeC----cccCc--eEEEEeCCcccCC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVA----GYPIE--SITWQKGVQQLPL 155 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~----~~~~~--~i~W~~~~~~~~~ 155 (258)
...|+|.|+|.+.|..|... ..+.|.|..+|........ ...+..+.|.|... +.|.. .+.|.+++.....
T Consensus 84 -~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~P~~p~~~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~ 160 (215)
T 3mtr_A 84 -SENDFGNYNCTAVNRIGQES-LEFILVQADTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWH 160 (215)
T ss_dssp -SGGGCEEEEEEEECSSCEEE-EEEEEEECCCCCCCEEEEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCE
T ss_pred -ChhhCeEEEEEEEECCCceE-EEEEEEECCCCCCCcceEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccc
Confidence 99999999999999998776 7788888766543221111 23467788888642 22322 4778877654221
Q ss_pred CcceEE---ecCCeEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 156 NRRQKV---FPNGTLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 156 ~~~~~~---~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
...... .....+.|.++.. .+.|.|+|.|.|..|...
T Consensus 161 ~~~~~~~~~~~~~~l~i~~L~~-~~~y~~~~~A~N~~G~s~ 200 (215)
T 3mtr_A 161 SKWYDAKEASMEGIVTIVGLKP-ETTYAVRLAALNGKGLGE 200 (215)
T ss_dssp EEEEEHHHHHHHTEEEEECCCT-TCEEEEEEEEEESSCBCC
T ss_pred ccccccccccccccEEECCCCC-CCEEEEEEEEEeCCcccC
Confidence 111111 1126799999997 999999999999988543
No 218
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.83 E-value=1.8e-19 Score=130.33 Aligned_cols=179 Identities=17% Similarity=0.199 Sum_probs=105.7
Q ss_pred eeeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee---CCcEEE
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP---NGTLLI 78 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~i 78 (258)
+..+.++.+.+|++|+|.|.+.+. +.+.+.|+|.. .....- ..+...........+..|..+.. +.+|.|
T Consensus 3 l~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 79 (215)
T 3nl4_H 3 VEESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWI---GIISNFGVIYYATWAKGRFTISKTSTTVDLKI 79 (215)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEE---EEECTTCCEEECGGGTTTEEEEECSSEEEEEE
T ss_pred eEcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEE---EEEecCCccccCCcccCCEEEEeeCCEEEEEE
Confidence 345677889999999999999763 35689999842 110000 00000000011111222322222 235999
Q ss_pred eecccCCCceEEEEEEEeCCcc---eeeceEEEEEe----cCCeec-cCCCcceecCCcEEEEeeeCcccC--ceEEEEe
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGR---SSSQNVHISVT----GAPFVR-PMGNVSAIAGEPLYLGCPVAGYPI--ESITWQK 148 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~----~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~--~~i~W~~ 148 (258)
.++ +.+|+|.|.|.+.+..+. .......|.|. .+|.+. ......+..|+.+.|.|.+.+.++ ..+.|++
T Consensus 80 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~ 158 (215)
T 3nl4_H 80 TSP-TTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNS 158 (215)
T ss_dssp SSC-CGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGG
T ss_pred CCC-CcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEee
Confidence 999 999999999999987542 12245567776 233333 233345667999999999988543 3678999
Q ss_pred CCcccCCCcce-EEecCCeEEE---EecccCCCCcEEEEEEEeCCC
Q psy14532 149 GVQQLPLNRRQ-KVFPNGTLLI---ENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 149 ~~~~~~~~~~~-~~~~~~~l~i---~~~~~~~~~g~y~C~~~~~~~ 190 (258)
++..+...... ....++.+.+ ..+.. .| |.|+|.|.|..+
T Consensus 159 ~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~-~d-g~ytC~v~~~~~ 202 (215)
T 3nl4_H 159 GTLTNGVRTFPSVRQSSGLYSLSSVVSVTS-SS-QPVTCNVAHPAT 202 (215)
T ss_dssp GTBCTTEEECCCEECTTSCEEEEEEEEECC-----CCEEEEEEGGG
T ss_pred CCEECCeEecCceECCCCCEEEEEEEEEec-cC-CEEEEEEEeCCC
Confidence 88755322211 2234555555 44655 67 999999999865
No 219
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.83 E-value=8.1e-20 Score=135.41 Aligned_cols=179 Identities=19% Similarity=0.263 Sum_probs=105.9
Q ss_pred eeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++|+|.|.+.+. +...+.|+|.. ....... .....+........+..|..+.. +.+|.
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (253)
T 3liz_H 5 VESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVA--TINSNGASTYYPDTVKGRFTISRDNAKNTLFLQ 82 (253)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEE--EECTTSSCEECCTTTTTTCEEEEEGGGTEEEEE
T ss_pred EcCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEE--EEecCCCccccCcccCCcEEEEEeCCCCEEEEE
Confidence 45667889999999999999763 35689999842 1100000 00000000011112223333322 23599
Q ss_pred EeecccCCCceEEEEEEEeCC---cceeeceEEEEEe----cCCeec-cCCCcceecCCcEEEEeeeCc-ccCc-eEEEE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQ---GRSSSQNVHISVT----GAPFVR-PMGNVSAIAGEPLYLGCPVAG-YPIE-SITWQ 147 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~---~~~~~~~~~l~v~----~~~~~~-~~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~ 147 (258)
|.++ +.+|+|.|.|.+.+.. .........|.|. .+|.+. ......+..|+.+.|.|.+.+ .|.+ .+.|+
T Consensus 83 I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 161 (253)
T 3liz_H 83 MSSL-KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 161 (253)
T ss_dssp ECSC-CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEG
T ss_pred ECCC-ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEE
Confidence 9999 9999999999998753 1122244567776 233333 223334567999999999988 6666 89999
Q ss_pred eCCcccCCCcc------eEEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 148 KGVQQLPLNRR------QKVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 148 ~~~~~~~~~~~------~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+++........ -.....+.|.|.+... +| |.|+|.|.|..+
T Consensus 162 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d-g~ytC~v~~~~~ 208 (253)
T 3liz_H 162 SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTW-PS-ETVTCNVAHPAS 208 (253)
T ss_dssp GGTBCTTEEECCCEEETTEEEEEEEEEEETTST-TT-SCCEEEEEEGGG
T ss_pred eCCeecceEeCCccccCCeEEEEEEEEEcHHHC-CC-ceEEEEEEECCC
Confidence 98864321100 1111224678888775 78 999999999865
No 220
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.82 E-value=1.8e-19 Score=131.43 Aligned_cols=178 Identities=21% Similarity=0.313 Sum_probs=108.1
Q ss_pred eeceeeeecCCCceEEEEEEeecCC----CeEEEeeC--CEeCcCCccccceecccceeeccccccceeeee-----CCc
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNPT----PHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGT 75 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~~----~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 75 (258)
..+..+.+.+|++|+|.|.+.+.+. +.+.|+|. +..+..- ..............+..|..+.. +.+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l---~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (228)
T 3bae_H 5 KESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWL---AHIYWDDDKRYNPSLESRLTISKDTSRDMVF 81 (228)
T ss_dssp EEECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEE---EEECTTSCEEECTTTGGGEEEEEETTTTEEE
T ss_pred eCCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEE---EEEecCCceeeCcccCCcEEEEEcCCCCeEE
Confidence 3467788999999999999987654 78999985 2211100 00000000001111222333221 357
Q ss_pred EEEeecccCCCceEEEEEEEeCCc------c--eeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cC
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQG------R--SSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PI 141 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~------~--~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~ 141 (258)
|.|.++ +.+|+|.|.|.+.+..+ . .....+.|.|.. +|.+.. .+...+..|+.+.|.|.+.+. |.
T Consensus 82 L~I~~v-~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~ 160 (228)
T 3bae_H 82 MKITSV-DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPE 160 (228)
T ss_dssp EEECSC-CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSS
T ss_pred EEEcCC-CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCC
Confidence 999999 99999999999998654 1 111346777763 233222 222345689999999999885 77
Q ss_pred c-eEEEEeCCcccCCCcceEE------ecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 142 E-SITWQKGVQQLPLNRRQKV------FPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 142 ~-~i~W~~~~~~~~~~~~~~~------~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+ .+.|++++..+........ ...+.|.|.++.. ++ |.|+|.|.|..+
T Consensus 161 p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~-g~YtC~~~n~~~ 214 (228)
T 3bae_H 161 PVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTW-PS-ESITCNVAHPAS 214 (228)
T ss_dssp CCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTT-TT-SCCEEEEEEGGG
T ss_pred CEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhc-CC-CcEEEEEEECCC
Confidence 7 9999998765421111111 1223577777764 55 999999999865
No 221
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.82 E-value=1e-18 Score=128.61 Aligned_cols=182 Identities=15% Similarity=0.183 Sum_probs=110.2
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceecccceeeccc-cccceeee-----e
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLP-LNRRQKVF-----P 72 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~ 72 (258)
+.+...+..+.+.+|++|+|.|.+.+. +...+.|+|.. ..+..- .....+........ +..|..+. .
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 78 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFL---VSISYDGTVRKESGIPSGKFEVDRIPETS 78 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEE---EEECSSSCEEECTTCCTTSEEEEEETTTT
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEE---EEEecCCceecCCcccCCeEEEEecCCCc
Confidence 456667888999999999999999875 56789999852 211100 00000000000000 12222222 2
Q ss_pred CCcEEEeecccCCCceEEEEEEEeCCc------ceeeceEEEEEecC-------Ce--eccCCCcceecCCcEEEEeeeC
Q psy14532 73 NGTLLIENVQKDHDRGVYWCTATNKQG------RSSSQNVHISVTGA-------PF--VRPMGNVSAIAGEPLYLGCPVA 137 (258)
Q Consensus 73 ~~~l~i~~~~~~~d~G~Y~C~~~~~~~------~~~~~~~~l~v~~~-------~~--~~~~~~~~~~~g~~~~l~C~~~ 137 (258)
+.+|.|.++ +.+|+|.|.|.+.+... ........|.|... |. +..+....+..|+.+.|.|.+.
T Consensus 79 ~~~L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~ 157 (242)
T 1hxm_B 79 TSTLTIHNV-EKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLE 157 (242)
T ss_dssp EEEEEECSC-CGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEE
T ss_pred EEEEEECCC-CcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEe
Confidence 457999999 99999999999987631 11224567777652 21 1112223455799999999998
Q ss_pred cc-cC-ceEEEEeCCc-ccCCCc-ceEEecC------CeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 138 GY-PI-ESITWQKGVQ-QLPLNR-RQKVFPN------GTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 138 ~~-~~-~~i~W~~~~~-~~~~~~-~~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
+. |. +.+.|++++. .+.... ......+ ..|.|.+... + |.|+|.|.|..+.
T Consensus 158 g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~--~-g~y~C~v~n~~~~ 218 (242)
T 1hxm_B 158 KFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL--D-KEHRCIVRHENNK 218 (242)
T ss_dssp EESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG--G-SCEEEEEEETTSG
T ss_pred eEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC--C-CEEEEEEEeCCCC
Confidence 85 64 7999999887 453221 0011122 2466655442 4 9999999998763
No 222
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.82 E-value=3.7e-19 Score=133.16 Aligned_cols=181 Identities=14% Similarity=0.200 Sum_probs=111.4
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeecccccc-ceee----eeCCc
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNR-RQKV----FPNGT 75 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~ 75 (258)
+.+...+..+.+.+|++|+|.|.+.+ +.+.+.|+|.. ...... ... ..........+.. |..+ ..+.+
T Consensus 28 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~---~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~s 102 (270)
T 3qib_D 28 MKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFL---INF-QNQEVLQQIDMTEKRFSAECPSNSPCS 102 (270)
T ss_dssp CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEE---EEE-ETTEEEEECHHHHHHEEEECCTTSCEE
T ss_pred eeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEE---EEE-CCCCceecCCccCCcEEEEeCCCcEEE
Confidence 45667788899999999999999865 66799999832 111000 000 0000000000111 1111 12567
Q ss_pred EEEeecccCCCceEEEEEEEeCCc---ceeeceEEEEEec------CCeecc--CCCcceecCCcEEEEeeeCc-ccCc-
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQG---RSSSQNVHISVTG------APFVRP--MGNVSAIAGEPLYLGCPVAG-YPIE- 142 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~---~~~~~~~~l~v~~------~~~~~~--~~~~~~~~g~~~~l~C~~~~-~~~~- 142 (258)
|.|.++ +.+|+|.|+|.+.+... ........|.|.. +|.+.. +....+..|+.+.|.|.+.+ .|.+
T Consensus 103 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 181 (270)
T 3qib_D 103 LEIQSS-EAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 181 (270)
T ss_dssp EEESSC-CGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEECCC-CHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCe
Confidence 999999 99999999999986431 1222445677765 232221 22334456899999999988 5656
Q ss_pred eEEEEeCCcccCCCcceE--------EecC------CeEEEEecccCCC-CcEEEEEEEeCCC
Q psy14532 143 SITWQKGVQQLPLNRRQK--------VFPN------GTLLIENVQKDHD-RGVYWCTATNKQG 190 (258)
Q Consensus 143 ~i~W~~~~~~~~~~~~~~--------~~~~------~~l~i~~~~~~~~-~g~y~C~~~~~~~ 190 (258)
.+.|++++..+....... ...+ ..|.|..... +| .|.|+|.+.|...
T Consensus 182 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~~g~YtC~v~~~~l 243 (270)
T 3qib_D 182 ELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFW-QNPRNHFRCQVQFYGL 243 (270)
T ss_dssp EEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHH-HSTTCEEEEEEEECCB
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHh-ccCCCeEEEEEEecCC
Confidence 899999998775432211 0012 2356666655 55 9999999999754
No 223
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.81 E-value=4.4e-19 Score=146.60 Aligned_cols=172 Identities=23% Similarity=0.435 Sum_probs=118.0
Q ss_pred eeeeecCCCceEEEEEE-eecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCce
Q psy14532 10 IQQTLQPGPPVSLKCIA-TGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRG 88 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G 88 (258)
....+.+|++++|.|.+ .+.+.+.+.|+|++..+.... . .. ......+..+.....+++|.|.++ +.+|+|
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~----~-~~--~~~~~~~~~r~~~~~~~~L~i~~v-~~~D~G 445 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWK----V-LS--PQGGGPWDSVARVLPNGSLFLPAV-GIQDEG 445 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCE----E-CC--SCCSSGGGGTSEECTTSCEEESSC-CGGGCE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEE----e-cc--cCCCCCcCCcEEEcCCceEEEecc-ccccCe
Confidence 45678899999999998 677888999999865322110 0 00 000112334455566789999999 999999
Q ss_pred EEEEEEEeCCcceeeceEEEEEecCC---eeccCCCcceecCCc-EEEEeeeCc-ccCceEEEEeCCcccCCCcc-eEE-
Q psy14532 89 VYWCTATNKQGRSSSQNVHISVTGAP---FVRPMGNVSAIAGEP-LYLGCPVAG-YPIESITWQKGVQQLPLNRR-QKV- 161 (258)
Q Consensus 89 ~Y~C~~~~~~~~~~~~~~~l~v~~~~---~~~~~~~~~~~~g~~-~~l~C~~~~-~~~~~i~W~~~~~~~~~~~~-~~~- 161 (258)
.|+|.+.+..+......+.|.|..++ .+...... +..++. +.|.|.+.+ .|.+.++|++++..+..... ..+
T Consensus 446 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~-~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~ 524 (581)
T 3o3u_N 446 IFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASE-LTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVK 524 (581)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCSE-ECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEE
T ss_pred EEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcc-cccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEE
Confidence 99999999888774477888887643 22222223 444544 567999987 58999999999987764322 111
Q ss_pred ---e---cC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 162 ---F---PN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 162 ---~---~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
. .. .+|.|.++..+++.|.|+|.+.|...
T Consensus 525 ~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 525 EQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp EEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred eeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 1 11 24788777754668999999999864
No 224
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.81 E-value=2.1e-19 Score=127.29 Aligned_cols=127 Identities=25% Similarity=0.474 Sum_probs=104.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEe-CCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQK-GVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~-~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
+....+.+|+.+.|.|.+.+.|. .+.|++ ++..+....+..+...+ .|.|.++.. +|+|.|+|.+.+..+...+
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~~~~g~~~~ 86 (189)
T 2v44_A 9 LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANI-EDAGIYRCQATDAKGQTQE 86 (189)
T ss_dssp CSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEECTTSCEEE
T ss_pred CCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCc-ccCeEEEEEEEeCCCCcEE
Confidence 34567889999999999988776 899999 77777666666555544 799999997 9999999999998775556
Q ss_pred ceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 195 QNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 195 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
..+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+..
T Consensus 87 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~ 139 (189)
T 2v44_A 87 ATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTT 139 (189)
T ss_dssp EEEEEEEECCCEEESCCCSEEEETTSCEEECCEE-ECSSCCEEEEEEEC--CEE
T ss_pred EEEEEEEecCCceeecCCcEEEeCCCCEEEEEEE-CcCCCCcEEEEECCcEEec
Confidence 7888889888877666666778899999999999 5889999999999998863
No 225
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.81 E-value=2.3e-19 Score=131.65 Aligned_cols=176 Identities=11% Similarity=0.190 Sum_probs=106.5
Q ss_pred CCcceeeceeee--ecCCCceEEEEEEeec---CCC-eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCc
Q psy14532 2 HPQLIYKFIQQT--LQPGPPVSLKCIATGN---PTP-HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGT 75 (258)
Q Consensus 2 ~p~~~~~~~~~~--~~~g~~v~l~C~~~~~---~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (258)
+|.+...+.... +.+|++++|.|.+.+. |.+ .|.|+|++..+......... .+. ........+
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~----------~~~-~~~~~~~s~ 83 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPE----------KQS-NSTLRSVSE 83 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCE----------ECT-TSCEEEEEE
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccce----------EcC-CCcEEEEEE
Confidence 355544444444 7899999999999886 665 89999987554322100000 000 011123457
Q ss_pred EEEeecccCCCceEEEEEEEeCCccee-eceEEE--EEecCCeecc-CCCcceecCCcEEEEeeeCc-ccC-ceEEEEeC
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQGRSS-SQNVHI--SVTGAPFVRP-MGNVSAIAGEPLYLGCPVAG-YPI-ESITWQKG 149 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~~~~-~~~~~l--~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~-~~i~W~~~ 149 (258)
|.|.++ +.+|+|.|+|.+.+..+... ...+.+ .+..+|.+.. ........|+.+.|.|.+.| +|. ..|.|+++
T Consensus 84 L~I~~~-~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~ 162 (239)
T 1i1c_A 84 LPIVER-DWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMN 162 (239)
T ss_dssp EECCHH-HHHTTCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EEEEhh-HccCCCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEEC
Confidence 999999 99999999999999876432 122222 2223343322 22222335788999999988 454 48999999
Q ss_pred CcccCCCcc--eEEecCCeEEE------EecccCCCCcEEEEEEEeCCC
Q psy14532 150 VQQLPLNRR--QKVFPNGTLLI------ENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 150 ~~~~~~~~~--~~~~~~~~l~i------~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+..+..... .....++++.+ ..... ++.|.|+|.|.|...
T Consensus 163 g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~-~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 163 GQPQENYKNTPPTMDTDGSYFLYSKLNVKKETW-QQGNTFTCSVLHEGL 210 (239)
T ss_dssp TEECSSEEECCCEECTTSCEEEEEEEEEEHHHH-HTTCCEEEEEECTTS
T ss_pred CEECCCceecCceECCCCCEEEEEEEEEChhhc-CCCCEEEEEEECCCC
Confidence 987753221 12234454333 33332 478999999999753
No 226
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.81 E-value=1.1e-19 Score=128.89 Aligned_cols=131 Identities=27% Similarity=0.477 Sum_probs=107.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC-CcceEEecC-CeEEEEecccCCCCcEEEEEEEeCCCCCccce
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL-NRRQKVFPN-GTLLIENVQKDHDRGVYWCTATNKQGRSSSQN 196 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~-~~~~~~~~~-~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~ 196 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+..+..+ ..|.|.++.. +|+|.|+|.+.+..+...+..
T Consensus 14 ~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~ 92 (192)
T 2iep_A 14 LETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVED-SDDGIYCCTANNGVGGAVESC 92 (192)
T ss_dssp CCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCG-GGCEEEEEEEECSSSCCEEEE
T ss_pred ccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCc-ccCeEEEEEEEcCCCceeEeE
Confidence 4456788999999999999988899999999887654 334444433 4699999997 999999999999877555667
Q ss_pred EEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccccc
Q psy14532 197 VHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 197 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
..|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+..+..
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~ 146 (192)
T 2iep_A 93 GALQVKMKPKITRPPINVKIIEGLKAVLPCTT-MGNPKPSVSWIKGDSALRENSR 146 (192)
T ss_dssp EEEEEEEEEEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEETTEECCCCSS
T ss_pred EEEEEEeCCccccCCcceEEeCCCcEEEEEEE-eccCCceEEEEeCCEEccCCCc
Confidence 78888888877766666778899999999999 6888899999999999877654
No 227
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.81 E-value=4.7e-19 Score=127.31 Aligned_cols=169 Identities=14% Similarity=0.254 Sum_probs=99.6
Q ss_pred Ccceeeceeeee--cCCCceEEEEEEeecC----CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcE
Q psy14532 3 PQLIYKFIQQTL--QPGPPVSLKCIATGNP----TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTL 76 (258)
Q Consensus 3 p~~~~~~~~~~~--~~g~~v~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 76 (258)
|.+...+....+ .+|++++|.|.+.+.+ ...|.|+|++..+....... .....++.+
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~-----------------~~~~~~g~~ 64 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKP-----------------REEQYNSTY 64 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECC-----------------CEECTTSCE
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCC-----------------ceeccCCcE
Confidence 555444444434 7999999999998864 34999999997765331000 001112333
Q ss_pred E------EeecccCCCceEEEEEEEeCCccee-eceEEE--EEecCCeecc-CCCcceecCCcEEEEeeeCcc-cC-ceE
Q psy14532 77 L------IENVQKDHDRGVYWCTATNKQGRSS-SQNVHI--SVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGY-PI-ESI 144 (258)
Q Consensus 77 ~------i~~~~~~~d~G~Y~C~~~~~~~~~~-~~~~~l--~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~-~~i 144 (258)
. |... ...|+|.|+|.+.+..+... ...+.+ .+..+|.+.. ........|+.+.|.|.+.|. |. +.+
T Consensus 65 ~~~~~l~i~~~-d~~d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v 143 (207)
T 1l6x_A 65 RVVSVLTVLHQ-DWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAV 143 (207)
T ss_dssp EEEEEEECCHH-HHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEE
T ss_pred EEEEEEEEEHH-HccCCceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEE
Confidence 3 3333 34459999999999866432 122221 2233343322 222222346669999999884 54 499
Q ss_pred EEEeCCcccCCCcc--eEEecCCeEE------EEecccCCCCcEEEEEEEeCCC
Q psy14532 145 TWQKGVQQLPLNRR--QKVFPNGTLL------IENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 145 ~W~~~~~~~~~~~~--~~~~~~~~l~------i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.|++++..+..... .....++++. |..... +|.|.|+|.|.|...
T Consensus 144 ~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~-~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 144 EWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRW-QQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHH-HTTCCEEEEEECTTS
T ss_pred EEEECCeeccCccccCceECCCCCEEEEEEEEECHHHc-CCCCEEEEEEEcCCc
Confidence 99999987653221 1223455433 333333 578999999999754
No 228
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.81 E-value=1.4e-19 Score=132.25 Aligned_cols=172 Identities=15% Similarity=0.205 Sum_probs=108.7
Q ss_pred CCcce-eeceeeeecCCCceEEEEEEeec-CC-C-eEEEeeCCEeC-cCCccccceecccceeeccccccceeeeeCCcE
Q psy14532 2 HPQLI-YKFIQQTLQPGPPVSLKCIATGN-PT-P-HISWKLDGYPL-AGDRHENKNRIGEARVQQLPLNRRQKVFPNGTL 76 (258)
Q Consensus 2 ~p~~~-~~~~~~~~~~g~~v~l~C~~~~~-~~-~-~v~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 76 (258)
+|.+. ..+....+.+|++++|.|.+.+. |. + .+.|+++|..+ .... ..... .... ......+|
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~--~~~~~--------~~~g--~~~~~s~L 79 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDP--MVLQE--------HFNG--TYSASSAV 79 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCC--CEEEE--------CTTS--CEEEEEEE
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeecccccc--ccceE--------CCCC--cEEEEEEE
Confidence 45653 56666778899999999999885 63 4 99999988766 2210 00000 0000 01123469
Q ss_pred EEeecccCCCceEEEEEEEeCCcceeeceEEEEEe------cCCeecc-CCCcceecCCcEEEEeeeCcc-c-CceEEEE
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT------GAPFVRP-MGNVSAIAGEPLYLGCPVAGY-P-IESITWQ 147 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~------~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~-~~~i~W~ 147 (258)
.|.++ +.+|+|.|+|.+.+..+.. .+.+.|. .+|.+.. ........++.+.|.|.+.+. | .+.|.|+
T Consensus 80 ~I~~~-~~~D~g~Y~C~~~~~~~~~---~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 155 (231)
T 2w59_A 80 PVSTQ-DWLSGERFTCTVQHEELPL---PLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWL 155 (231)
T ss_dssp ECCHH-HHHTTCCEEEEEECTTCSS---CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred Eecch-hccCCCEEEEEEEcCCCCC---ceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEE
Confidence 99999 8899999999999876532 2333342 2333221 111111235679999999885 4 3699999
Q ss_pred eCCcccCCCcce----EEe--------cC-C------eEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 148 KGVQQLPLNRRQ----KVF--------PN-G------TLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 148 ~~~~~~~~~~~~----~~~--------~~-~------~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+++..+...... ... .+ + .|.|..... +|.|.|+|.|.|...
T Consensus 156 k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~-~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 156 RDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKW-NGGTVFACMAVHEAL 216 (231)
T ss_dssp ETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHH-HTTCCEEEEEECTTS
T ss_pred ECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHc-CCCCcEEEEEEcCCC
Confidence 999887544311 111 23 3 366666665 789999999999764
No 229
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.81 E-value=2.7e-19 Score=126.83 Aligned_cols=129 Identities=22% Similarity=0.304 Sum_probs=104.2
Q ss_pred CCeeccCCCcceec-CCcEEEEeeeCcccC--ceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCC
Q psy14532 113 APFVRPMGNVSAIA-GEPLYLGCPVAGYPI--ESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 113 ~~~~~~~~~~~~~~-g~~~~l~C~~~~~~~--~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~ 189 (258)
+|.+.......+.+ |+.+.|.|.+.+.+. +.+.|++++..+....... .++.|.|.++.. +|+|.|+|.+.+.
T Consensus 3 ~P~i~~~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~--~~~~L~i~~~~~-~d~G~Y~C~~~n~- 78 (190)
T 2wv3_A 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA--SNMEYRINKPRA-EDSGEYHCVYHFV- 78 (190)
T ss_dssp CCEEEECCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC--SEEEEEESSCCG-GGCEEEEEEEEET-
T ss_pred CCcccccceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe--ccEEEEEecCCc-ccCEEEEEEEEeC-
Confidence 34444444555556 999999999988776 7999999998876543322 456799999997 9999999999998
Q ss_pred CCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEE--CCEecc
Q psy14532 190 GRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLK--NGLPIL 247 (258)
Q Consensus 190 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~--~g~~l~ 247 (258)
+ ..+..+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++ +|..+.
T Consensus 79 ~-~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~g~~~~ 136 (190)
T 2wv3_A 79 S-APKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKS-VGYPHPEWMWRKKENGVFEE 136 (190)
T ss_dssp T-EEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEE-ECSSCCEEEEEEEETTEEEE
T ss_pred C-cccccEEEEEecCCcccccCCcceeeCCCcEEEEEEe-CccCCCceEEEEcCCCceee
Confidence 4 5667888999999987766666678999999999999 689999999999 888774
No 230
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.80 E-value=1.8e-18 Score=125.06 Aligned_cols=177 Identities=21% Similarity=0.345 Sum_probs=105.4
Q ss_pred eceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcEEE
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLLI 78 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i 78 (258)
.+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. .....- ..............+..|..+.. +.+|.|
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l---~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (215)
T 1c5d_H 6 ESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWI---AAISSGGSPYYNSALKSRLSINRDTSKSQVFLKM 82 (215)
T ss_dssp EECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEE---EEECTTCCEECCTTTGGGEEEEEETTTTEEEEEE
T ss_pred cCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEE---EEEcCCCCcEECCcccCcEEEEeeCCCceEEEEE
Confidence 46778899999999999998754 4689999853 211000 00000000000111222333221 247999
Q ss_pred eecccCCCceEEEEEEEeCCcc--eeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eEEEEeC
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGR--SSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SITWQKG 149 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W~~~ 149 (258)
.++ +.+|+|.|.|.+.+..+. .....+.|.|.. +|.+.. .+...+..|+.+.|.|.+.+. |.+ .+.|+++
T Consensus 83 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 161 (215)
T 1c5d_H 83 NSL-QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSG 161 (215)
T ss_dssp SSC-CGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CCC-CcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccC
Confidence 999 999999999999986421 122346777763 232221 222345689999999999885 777 9999998
Q ss_pred CcccCCCcceEEecCCeEE----EEecccCCCCcEEEEEEEeCCC
Q psy14532 150 VQQLPLNRRQKVFPNGTLL----IENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~----i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+..+...........+.+. +..... ++ |.|+|.|.|..+
T Consensus 162 g~~~~~~~~~~~~~~g~~~~~s~L~~~~~-~~-g~ytC~v~n~~~ 204 (215)
T 1c5d_H 162 ALSSDVHTFPAVLQSGLYTLTSSVTSSTW-PS-QTVTCNVAHPAS 204 (215)
T ss_dssp TTCCSCCBCCCEEETTEEEEEEEEEESST-TT-SCCEEEEEEGGG
T ss_pred CccCceEecCcccCCCCEEEEEEEecccC-CC-CeEEEEEEeCCC
Confidence 7654321111111123322 222322 45 999999999865
No 231
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.80 E-value=5.9e-19 Score=131.14 Aligned_cols=178 Identities=17% Similarity=0.284 Sum_probs=108.7
Q ss_pred eeeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeeee-----CCc
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVFP-----NGT 75 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~ 75 (258)
...+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. ..+..- ..+.. +........+..|..+.. +.+
T Consensus 10 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 86 (261)
T 2xqy_G 10 LQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWI---GRIDPSDNETHYNQDFKDKVTLTVDKSSSTVY 86 (261)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEE---EEECTTTCCEEECGGGTTTEEEEEEGGGTEEE
T ss_pred EECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEE---EEEecCCCceeeCCccCCcEEEEecCCCCEEE
Confidence 3446778899999999999998765 5789999863 211000 00000 000001111222333222 357
Q ss_pred EEEeecccCCCceEEEEEEEeCCc-c-eeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eEEE
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQG-R-SSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SITW 146 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~-~-~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W 146 (258)
|.|.++ +.+|+|.|.|.+.+..+ . .....+.|.|.. +|.+.. .+...+..|+.+.|.|.+.+. |.+ .+.|
T Consensus 87 L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W 165 (261)
T 2xqy_G 87 IQLSSL-TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 165 (261)
T ss_dssp EEECSC-CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEcCC-CcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEE
Confidence 999999 99999999999998642 1 112445777764 232221 222345679999999999874 766 9999
Q ss_pred EeCCcccCCCc--ce----EEecCCeEEEEecccCCCCcEEEEEEEeCC
Q psy14532 147 QKGVQQLPLNR--RQ----KVFPNGTLLIENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 147 ~~~~~~~~~~~--~~----~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~ 189 (258)
++++..+.... .. .....+.|.|.+... +| |.|+|.|.|..
T Consensus 166 ~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-g~YtC~v~n~~ 212 (261)
T 2xqy_G 166 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTW-PS-QSITCNVAHPA 212 (261)
T ss_dssp GGGTCCTTEEECCCEEETTEEEEEEEEEEETTTT-TT-SCCEEEEEEGG
T ss_pred ecCCCcCceEecCceecCCcEEEEEEEEEecccc-CC-CEEEEEEEECC
Confidence 99887643111 00 111234577877765 67 99999999964
No 232
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.80 E-value=2.7e-18 Score=127.23 Aligned_cols=179 Identities=15% Similarity=0.169 Sum_probs=108.4
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCccccceecccceeecccccc-ceeeeeCCc--EEEe
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNR-RQKVFPNGT--LLIE 79 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--l~i~ 79 (258)
+...+..+.+.+|++|+|.|.+.+.+.+.+.|+|. +...... .............+.. |.....+.. |.|.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~ 79 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWL----FTLRSPGDKEVKSLPGADYLATRVTDTELRLQ 79 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEE----EEECSTTCEEEEEETTEEEEEECCSSSCCEEE
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEE----EEECCCcceecCCccCCcEEEEeCCCCeEEEc
Confidence 45667788999999999999988777889999983 1111000 0000000000111111 222222222 9999
Q ss_pred ecccCCCceEEEEEEEeCCc-----ceeeceEEEEEec------CCeecc--CCCcceecCCcEEEEeeeCc-ccCc-eE
Q psy14532 80 NVQKDHDRGVYWCTATNKQG-----RSSSQNVHISVTG------APFVRP--MGNVSAIAGEPLYLGCPVAG-YPIE-SI 144 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~~l~v~~------~~~~~~--~~~~~~~~g~~~~l~C~~~~-~~~~-~i 144 (258)
++ +.+|+|.|+|.+.+..+ ........|.|.. +|.+.. +....+..|+.+.|.|.+.+ .|.+ .+
T Consensus 80 ~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v 158 (253)
T 3to4_D 80 VA-NMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 158 (253)
T ss_dssp EE-SCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred cC-ChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEE
Confidence 99 99999999999986543 1222444666653 222221 12223335689999999988 5666 89
Q ss_pred EEEeCCcccCCCcceEEe--------cCC------eEEEEecccCCC-CcEEEEEEEeCC
Q psy14532 145 TWQKGVQQLPLNRRQKVF--------PNG------TLLIENVQKDHD-RGVYWCTATNKQ 189 (258)
Q Consensus 145 ~W~~~~~~~~~~~~~~~~--------~~~------~l~i~~~~~~~~-~g~y~C~~~~~~ 189 (258)
+|++++..+......... .++ .|.|..... +| +|.|+|.|.|..
T Consensus 159 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~-~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 159 SWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFW-QNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHH-TCTTCEEEEEEEECC
T ss_pred EEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHh-ccCCCEEEEEEEeCC
Confidence 999998877543221100 223 466666655 55 779999999975
No 233
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.80 E-value=7.1e-19 Score=124.69 Aligned_cols=129 Identities=25% Similarity=0.404 Sum_probs=105.2
Q ss_pred CCCcceecCCcEEEEeeeCccc-CceEEEEe-CCcccCC-CcceEEe----cCCeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP-IESITWQK-GVQQLPL-NRRQKVF----PNGTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~-~~~i~W~~-~~~~~~~-~~~~~~~----~~~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
+....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+.. ..+..+. ..+.|.|.++.. +|+|.|+|.+.+..+.
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~~~~~~ 87 (191)
T 1epf_A 9 PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANI-DDAGIYKCVVTAEDGT 87 (191)
T ss_dssp SSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCG-GGCEEEEEEEEETTTE
T ss_pred CCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCc-ccCEEEEEEEEcCCCc
Confidence 4566788999999999998876 78999999 7776652 3333332 335799999997 9999999999998754
Q ss_pred CccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 192 SSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 192 ~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
..+..+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+...
T Consensus 88 ~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~ 144 (191)
T 1epf_A 88 QSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILK 144 (191)
T ss_dssp EEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEE-ECSSCCEEEEEETTEEGGGG
T ss_pred ceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEE-CCCCCCEEEEEECCEEeecc
Confidence 5667788888888887777767778999999999999 58999999999999998653
No 234
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.80 E-value=4.8e-19 Score=126.11 Aligned_cols=131 Identities=24% Similarity=0.444 Sum_probs=105.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCccc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSSQ 195 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~ 195 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..+..++ .|.|.++.. +|+|.|+|.+.+..+. ...
T Consensus 14 ~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~n~~~~-~~~ 91 (197)
T 3lcy_A 14 MKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQ-EDEGVYTCIATNEVGE-VET 91 (197)
T ss_dssp CCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSG-GGCEEEEEEEECSSCE-EEE
T ss_pred CCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCc-cCCEEEEEEEECCCCc-eeE
Confidence 45677889999999999988888999999999888766666665555 799999997 9999999999988763 445
Q ss_pred eEEEEeecCCccccC---CCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccccc
Q psy14532 196 NVHISVTVPPKIAPF---EFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMGV 252 (258)
Q Consensus 196 ~~~l~v~~~p~~~~~---~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~~ 252 (258)
.+.|.|..+|.+... +....+..|+.+.|.|.+ .+.|.+.+.|+++|..+..+...
T Consensus 92 ~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~ 150 (197)
T 3lcy_A 92 SSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMY-IGRPVPAMTWFHGQKLLQNSENI 150 (197)
T ss_dssp EEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSE
T ss_pred EEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEE-eeeeCCeeEEeECCEECCCCCce
Confidence 667777766654432 223456789999999999 58899999999999999776543
No 235
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.80 E-value=3.5e-19 Score=113.72 Aligned_cols=96 Identities=26% Similarity=0.442 Sum_probs=77.5
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|+++.|.|.+.|.|.+.|.|+|++..+... .++.+.. .....+|.|.+
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~---~~~~~~~-------------~~~~~~L~I~~ 75 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS---ERLSFPA-------------DGAEHGLLLTA 75 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC---SSEECCE-------------ETTEEEEEESS
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccce---eeEEEee-------------cCceEEEEEec
Confidence 3789999999999999999999999999999999999999988654 2222210 01124699999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
+ +.+|+|.|+|.+.|..|... ..+.|.|..+|
T Consensus 76 v-~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~pP 107 (107)
T 3knb_B 76 A-LPTDAGVYVCRARNAAGEAY-AAAAVTVLEPP 107 (107)
T ss_dssp C-CGGGCEEEEEEEEETTEEEE-EEEEEEEEC--
T ss_pred C-ChhhCEEEEEEEEECCCEEE-EEEEEEEEcCC
Confidence 9 99999999999999998777 77888887654
No 236
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.80 E-value=3.3e-18 Score=125.07 Aligned_cols=180 Identities=17% Similarity=0.294 Sum_probs=103.3
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcEE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
..+..+.+.+|++|+|.|.+.+.+ ...+.|||.. .....- ..............+..|..+.. +.+|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l---~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 81 (232)
T 1dn0_B 5 QQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWI---GEINHSGSTNYNPSLKSRVTISVDTSKNQFSLK 81 (232)
T ss_dssp EEECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEE---EEECTTCCEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred ECCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEE---EEEecCCceeeCCccCCeEEEEEeCCCCEEEEE
Confidence 345668899999999999998754 5689999852 211000 00000000001111223333322 23799
Q ss_pred EeecccCCCceEEEEEEEeCC--cc---eeeceEEEEEecC----Ceecc-CCCcceecC-CcEEEEeeeCcc-cCc-eE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQ--GR---SSSQNVHISVTGA----PFVRP-MGNVSAIAG-EPLYLGCPVAGY-PIE-SI 144 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~--~~---~~~~~~~l~v~~~----~~~~~-~~~~~~~~g-~~~~l~C~~~~~-~~~-~i 144 (258)
|.++ +.+|+|.|.|.+.... +. .......|.|... |.+.. .+...+..| +.+.|.|.+.+. |.+ .+
T Consensus 82 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v 160 (232)
T 1dn0_B 82 LSSV-TAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITF 160 (232)
T ss_dssp ECSC-CGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEE
T ss_pred ECCC-CcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEE
Confidence 9999 9999999999998421 11 1224457888652 22221 112234467 899999999875 766 99
Q ss_pred EEEe-CCcccCCCc---ce----EEecCCeEEEEecccC--CCCcEEEEEEEeCCCC
Q psy14532 145 TWQK-GVQQLPLNR---RQ----KVFPNGTLLIENVQKD--HDRGVYWCTATNKQGR 191 (258)
Q Consensus 145 ~W~~-~~~~~~~~~---~~----~~~~~~~l~i~~~~~~--~~~g~y~C~~~~~~~~ 191 (258)
+|++ ++..+.... .. .....+.|.|.+.. . +|.|.|+|.|.|..+.
T Consensus 161 ~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~-~~~~d~g~ytC~v~n~~~~ 216 (232)
T 1dn0_B 161 SWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKD-VMAGTDEHVVCKVQHPNGN 216 (232)
T ss_dssp EEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTC-C---CCCEEEEEEECTTCC
T ss_pred EEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHH-hcccCCCeEEEEEEeCCCC
Confidence 9999 887654300 00 11112345665443 2 4689999999998763
No 237
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.80 E-value=8.1e-19 Score=126.56 Aligned_cols=128 Identities=23% Similarity=0.394 Sum_probs=98.1
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEe----cCCeEEEEecc-cCCCCcEEEEEEEeCCCCCc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVF----PNGTLLIENVQ-KDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~----~~~~l~i~~~~-~~~~~g~y~C~~~~~~~~~~ 193 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......... ....|.|.++. . +|+|.|+|.+.|..+. .
T Consensus 13 p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~-~d~G~Y~C~a~n~~g~-~ 90 (212)
T 2yd6_A 13 PVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTP-RDEAIYECVASNNVGE-I 90 (212)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTT-TTCEEEEEEEEETTEE-E
T ss_pred cceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCC-CCCeEEEEEEEcCCCc-E
Confidence 45567889999999999999999999999999887654333221 22358999984 6 9999999999998774 4
Q ss_pred cceEEEEeecC-------CccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 194 SQNVHISVTVP-------PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 194 ~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
+..+.|.|... |.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+...
T Consensus 91 ~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~p~v~W~~~g~~l~~~ 152 (212)
T 2yd6_A 91 SVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAA-SGNPDPEITWFKDFLPVDTS 152 (212)
T ss_dssp EEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEEC---
T ss_pred EEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEe-cCCCCCeEEEEECCccccCc
Confidence 56677777654 333333445567889999999999 68899999999999999765
No 238
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.80 E-value=3.8e-19 Score=125.83 Aligned_cols=133 Identities=23% Similarity=0.427 Sum_probs=101.0
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC--CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCC-Ccc
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL--NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGR-SSS 194 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~-~~~ 194 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..+.....++.|.|.++.. +|+|.|+|.+.+..+. ...
T Consensus 8 ~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~~~~~~~~~~ 86 (189)
T 2v5t_A 8 VVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINK-SDEGIYRCEGRVEARGEIDF 86 (189)
T ss_dssp CCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCG-GGCEEEEEEEEETTTTEEEE
T ss_pred cCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCH-hHCcEEEEEEEEcCCCceEE
Confidence 35567789999999999998888899999999877653 3455566778899999997 9999999999988642 233
Q ss_pred ceEEEEeecCCccccCCC--CCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccccc
Q psy14532 195 QNVHISVTVPPKIAPFEF--QPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMGV 252 (258)
Q Consensus 195 ~~~~l~v~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~~ 252 (258)
..+.+.+..+|.+..... ...+..|+.+.|.|.+ .+.|.+.+.|+++|..+......
T Consensus 87 ~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~~~ 145 (189)
T 2v5t_A 87 RDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRNGKLIEENEKY 145 (189)
T ss_dssp EEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEE-EEESCCEEEEEETTEECCCSSSE
T ss_pred EEEEEEecCCCCcccccccccccccCCCcEEEEEEE-ccCCCCeEEEEECCEECcCCCcE
Confidence 556677777776554332 3467889999999999 57888999999999999866543
No 239
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.80 E-value=1.2e-18 Score=125.59 Aligned_cols=131 Identities=25% Similarity=0.387 Sum_probs=102.6
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC-CCcceEEe--cC--CeEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP-LNRRQKVF--PN--GTLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~-~~~~~~~~--~~--~~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+. .+ ..|.|.++...+|+|.|+|.+.|..+..
T Consensus 12 ~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~ 91 (212)
T 2yd1_A 12 KPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDA 91 (212)
T ss_dssp CCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCE
T ss_pred CCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCe
Confidence 3556778999999999999998989999999998875 33333332 23 3688888873279999999999988754
Q ss_pred ccceEEEEeecC-------CccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 193 SSQNVHISVTVP-------PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 193 ~~~~~~l~v~~~-------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
.+..+.|.|... |.+...+....+..|+.+.|.|.+ .+.|.+.|.|+++|..+...
T Consensus 92 ~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~ 154 (212)
T 2yd1_A 92 VSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKA-IGNPTPNIYWIKNQTKVDMS 154 (212)
T ss_dssp EEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEE-ECSSCCEEEEEETTEECCTT
T ss_pred EEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEe-ccCCCCeEEEEECCeEcccC
Confidence 667788888765 344444445567889999999999 68899999999999998764
No 240
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.79 E-value=2.5e-18 Score=126.22 Aligned_cols=179 Identities=15% Similarity=0.210 Sum_probs=108.7
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee----eCCcEEE
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF----PNGTLLI 78 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i 78 (258)
+...+..+.+.+|++|+|.|.+. .+.+.+.|+|.+ .....- .... .........+..|..+. .+.+|.|
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l---~~~~-~~~~~~~~~~~~R~~~~~~~~~~~~L~I 76 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLI---HYSY-GAGSTEKGDIPDGYKASRPSQEQFSLIL 76 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEE---EEEE-ETTEEEECSCCTTCEEECCSSSEEEEEE
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEE---EEEe-CCCcccCCCccceEEEEecCCCEEEEEE
Confidence 45678889999999999999985 457799999853 111000 0000 00000011112222222 2357999
Q ss_pred eecccCCCceEEEEEEEeCCc----ceeeceEEEEEec------CCeecc--CCCcceecCCcEEEEeeeCcc-cCc-eE
Q psy14532 79 ENVQKDHDRGVYWCTATNKQG----RSSSQNVHISVTG------APFVRP--MGNVSAIAGEPLYLGCPVAGY-PIE-SI 144 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~------~~~~~~--~~~~~~~~g~~~~l~C~~~~~-~~~-~i 144 (258)
.++ +.+|+|.|.|.+.+..+ ........|.|.. +|.+.. +....+..|+.+.|.|.+.+. |.+ .+
T Consensus 77 ~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v 155 (238)
T 1bec_A 77 ELA-TPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVEL 155 (238)
T ss_dssp SSC-CGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEE
T ss_pred ecC-CcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEE
Confidence 999 99999999999998632 1112345677764 233222 233345679999999999885 644 99
Q ss_pred EEEeCCcccCCCcce----EEecCCeEEE------EecccCCCCcEEEEEEEeCC
Q psy14532 145 TWQKGVQQLPLNRRQ----KVFPNGTLLI------ENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 145 ~W~~~~~~~~~~~~~----~~~~~~~l~i------~~~~~~~~~g~y~C~~~~~~ 189 (258)
.|++++..+...... ....++++.+ ......++.|.|+|.|.|..
T Consensus 156 ~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 156 SWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp EEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred EEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 999999876543221 1123454433 22222124678999999975
No 241
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.79 E-value=8.9e-19 Score=129.75 Aligned_cols=177 Identities=19% Similarity=0.323 Sum_probs=95.4
Q ss_pred eeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeeee-----CCcE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVFP-----NGTL 76 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~l 76 (258)
..+..+.+.+|++|+|.|.+.+.+ .+.+.|+|.. .....- ..... +........+..|..+.. +.+|
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (257)
T 3bn9_D 5 VQSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWV---SAISGSGGSTYYADSVKGRFTISRDNSKNTLYL 81 (257)
T ss_dssp EEECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEE---EEECSSSCCEEECGGGTTTEEEEEETTTTEEEE
T ss_pred EccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEE---EEEecCCCceecCcccCCceEEEecCCCCEEEE
Confidence 345567899999999999998764 5689999853 111000 00000 000001111223333322 3479
Q ss_pred EEeecccCCCceEEEEEEEeCCc----------c--eeeceEEEEEec----CCeecc-CCCcceecCCcEEEEeeeCcc
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQG----------R--SSSQNVHISVTG----APFVRP-MGNVSAIAGEPLYLGCPVAGY 139 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~~----------~--~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~C~~~~~ 139 (258)
.|.++ +.+|+|.|.|.+.+..+ . .......|.|.. +|.+.. .+...+..|+.++|.|.+.+.
T Consensus 82 ~I~~v-~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~ 160 (257)
T 3bn9_D 82 QMSSL-RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY 160 (257)
T ss_dssp EEESC-CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEE
T ss_pred EECCC-ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeE
Confidence 99999 99999999999998654 1 122445778864 233322 222235678999999999885
Q ss_pred -cCc-eEEEEeCCcccCCCcc-eEEecCC------eEEEEecccCCCCcEEEEEEEeCC
Q psy14532 140 -PIE-SITWQKGVQQLPLNRR-QKVFPNG------TLLIENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 140 -~~~-~i~W~~~~~~~~~~~~-~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~ 189 (258)
|.+ .++|++++..+..... .....++ .|.|.++.. +| |.|+|.|.|..
T Consensus 161 ~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~-~~-g~YtC~v~n~~ 217 (257)
T 3bn9_D 161 FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKP 217 (257)
T ss_dssp BSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC---------CEEEEEEEGG
T ss_pred ECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEccccc-CC-CeEEEEEEecC
Confidence 766 9999998876432111 1112233 355555554 56 99999999964
No 242
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.79 E-value=9e-19 Score=124.43 Aligned_cols=131 Identities=22% Similarity=0.452 Sum_probs=101.7
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc--ceEE-ec--CCeEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR--RQKV-FP--NGTLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~--~~~~-~~--~~~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+ .. ...|.|.++.. +|+|.|+|.+.+..+.
T Consensus 11 ~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~n~~~~- 88 (194)
T 2a38_A 11 PLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTK-ANSGRYSLKATNGSGQ- 88 (194)
T ss_dssp CCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCG-GGCEEEEEEEEETTEE-
T ss_pred cCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCc-ccCEEEEEEEEcCCce-
Confidence 3456778899999999999998989999999998776542 2222 12 23799999997 9999999999998763
Q ss_pred ccceEEEEee---cCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccccc
Q psy14532 193 SSQNVHISVT---VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 193 ~~~~~~l~v~---~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
....+.|.|. .+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+..+..
T Consensus 89 ~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~ 149 (194)
T 2a38_A 89 ATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRV-TGIPTPVVKFYRDGAEIQSSLD 149 (194)
T ss_dssp EEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEE-EEESCCEEEEEETTEECCCSSS
T ss_pred EeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEE-EEecCCeEEEEECCEECCCCCc
Confidence 4455667776 34444444556678899999999999 6888899999999999976654
No 243
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.79 E-value=2.1e-18 Score=124.91 Aligned_cols=127 Identities=25% Similarity=0.407 Sum_probs=103.5
Q ss_pred ccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccce
Q psy14532 117 RPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQN 196 (258)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~ 196 (258)
..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.++.. +|+|.|+|.+.+..+...+..
T Consensus 23 ~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~------~~~~L~i~~v~~-~d~G~Y~C~~~n~~~~~~s~~ 95 (218)
T 3k0w_A 23 VNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG------NTSELIFNAVHV-KDAGFYVCRVNNNFTFEFSQW 95 (218)
T ss_dssp ECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC------CSSEEEETTCCG-GGCEEEEEEEECTTCCEECCC
T ss_pred ECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC------CCCEEEEccCCh-hhCeEeEEEEEcCCCCceeeE
Confidence 3456678899999999999999899999999998877543 346799999997 999999999999877555677
Q ss_pred EEEEeecCC---------------ccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccccc
Q psy14532 197 VHISVTVPP---------------KIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 197 ~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
+.|.|...+ .+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+..+..
T Consensus 96 ~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~~~~~~~~~~ 164 (218)
T 3k0w_A 96 SQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHETK 164 (218)
T ss_dssp EEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEE-EBSSCCEEEEEETTEECTTCCS
T ss_pred EEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEe-cccCCCeEEEEECCEECCCCCC
Confidence 788887653 33334445678899999999999 6889999999999999876543
No 244
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.79 E-value=2.4e-19 Score=137.67 Aligned_cols=169 Identities=15% Similarity=0.236 Sum_probs=106.2
Q ss_pred eeceeeeecCCCceEEEEEEeec-CCC---eEEEeeCC-EeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN-PTP---HISWKLDG-YPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~-~~~---~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
..+....+.+|++++|.|.+.+. |.+ .|.|+|++ ..+... ..... ..... .....++|.|.++
T Consensus 118 ~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~---~~~~~-------~~~~g--~~~~~~~L~I~~~ 185 (323)
T 2wqr_A 118 SRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHS---TRKEE-------KQRNG--TLTVTSTLPVGTR 185 (323)
T ss_dssp CCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCC---CCEEE-------ECTTS--CEEEEEEEECCHH
T ss_pred cCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccc---cCCCc-------cCCCC--CEEEEEEEEECHH
Confidence 34445567899999999999885 455 89999964 443221 00000 00000 1113457999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEE----ecCCeecc-CCCcceecCCcEEEEeeeCcc-cCc-eEEEEeCCcccC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISV----TGAPFVRP-MGNVSAIAGEPLYLGCPVAGY-PIE-SITWQKGVQQLP 154 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v----~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~~~-~i~W~~~~~~~~ 154 (258)
+.+|+|.|+|.+.+...... ....+.+ ..+|.+.. ........|+.+.|.|.+.+. |.+ .+.|++++..+.
T Consensus 186 -~~~D~G~Y~C~a~n~~~~~~-~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~ 263 (323)
T 2wqr_A 186 -DWIEGETYQCRVTHPHLPRA-LMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLP 263 (323)
T ss_dssp -HHHTTCCEEEEEECTTSSSC-EEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred -HccCCCCEEEEEECCCCCCC-eeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECC
Confidence 99999999999998763322 2222221 12333221 111112239999999999884 433 899999998775
Q ss_pred CCcce----EEec------CCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 155 LNRRQ----KVFP------NGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 155 ~~~~~----~~~~------~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
..... .... .+.|.|..+.. +|+|.|+|.|.|...
T Consensus 264 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~a~n~~~ 308 (323)
T 2wqr_A 264 DARHSTTQPRKTKGSGFFVFSRLEVTRAEW-EQKDEFICRAVHEAA 308 (323)
T ss_dssp GGGEEECCCEECSSSSEEEEEEEEEEHHHH-HHCCCEEEEEECTTS
T ss_pred CCceeecCcccCCCCcEEEEEEEEEChHHc-cCCCEEEEEEEeCCC
Confidence 43211 0111 23588888887 899999999999865
No 245
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.79 E-value=5.5e-18 Score=125.46 Aligned_cols=181 Identities=13% Similarity=0.143 Sum_probs=109.1
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee----eCCcEE
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF----PNGTLL 77 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~ 77 (258)
.+...+..+.+.+|++|+|.|.+. .+.+.+.|+|.. .....- .+...........+..|..+. .+.+|.
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l----~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~ 79 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLI----YYSQIVNDFQKGDIAEGYSVSREKKESFPLT 79 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEE----EEESSTTCCEECSSCTTEEECCSSTTBCCEE
T ss_pred cceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEE----EEEccCccccCCccCCcEEEEecCCCEEEEE
Confidence 456677888999999999999985 457799999852 110000 000000000000111222221 246899
Q ss_pred EeecccCCCceEEEEEEEeCC--cceeeceEEEEEec------CCeecc--CCCcceecCCcEEEEeeeCcc-cC-ceEE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQ--GRSSSQNVHISVTG------APFVRP--MGNVSAIAGEPLYLGCPVAGY-PI-ESIT 145 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~--~~~~~~~~~l~v~~------~~~~~~--~~~~~~~~g~~~~l~C~~~~~-~~-~~i~ 145 (258)
|.++ +.+|+|.|.|.+.+.. .........|.|.. +|.+.. +....+..|+.+.|.|.+.+. |. +.+.
T Consensus 80 I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~ 158 (252)
T 1oga_E 80 VTSA-QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS 158 (252)
T ss_dssp ECSC-CSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred ECcC-ChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEE
Confidence 9999 9999999999999862 11111334566653 233222 222234478999999999885 64 4999
Q ss_pred EEeCCcccCCCcceE------E--ecCCe------EEEEecccCCCCcEEEEEEEeCCC
Q psy14532 146 WQKGVQQLPLNRRQK------V--FPNGT------LLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 146 W~~~~~~~~~~~~~~------~--~~~~~------l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
|++++..+....... . ..+++ |.|.+....++.+.|+|.+.|...
T Consensus 159 W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 217 (252)
T 1oga_E 159 WWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 217 (252)
T ss_dssp EEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 999988765432211 0 12333 566555442367899999999764
No 246
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.79 E-value=1.2e-18 Score=124.55 Aligned_cols=126 Identities=21% Similarity=0.306 Sum_probs=92.9
Q ss_pred cceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 122 VSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
..+.+|+.+.|.|.+.|.|.+.+.|+++...............+.|.|.++.. +|+|.|+|.+.|..+ ..+..+.|.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~~-~~~~~~~l~V 88 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSF-GNEHSYLCTATCESR-KLEKGIQVEI 88 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCG-GGCSEEEEEEEETTE-EEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCH-HHCEEEEEEEEECCc-eEeeEEEEEE
Confidence 34558999999999999999999999843221111111112334699999997 999999999999876 3566788899
Q ss_pred ecCCccccCCCCCccCCCCeeeEEEEeccCCCC--ceeEEEECCEecccc
Q psy14532 202 TVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP--LTISWLKNGLPILSA 249 (258)
Q Consensus 202 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~~~W~~~g~~l~~~ 249 (258)
..+|..........+.+|+.++|.|.+.++.|. +.|.|+++|..|...
T Consensus 89 ~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~ 138 (202)
T 1vca_A 89 YSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQ 138 (202)
T ss_dssp EBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEE
T ss_pred EeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECccc
Confidence 887764433323668899999999999655554 479999999988654
No 247
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.78 E-value=2.6e-18 Score=123.74 Aligned_cols=130 Identities=23% Similarity=0.523 Sum_probs=102.6
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCccc------------CCCcceEEecCCeEEEEecccCCCCcEEEEEEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQL------------PLNRRQKVFPNGTLLIENVQKDHDRGVYWCTAT 186 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~------------~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~ 186 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....+... ....|.|.++.. +|+|.|+|.+.
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~~L~i~~v~~-~D~G~Y~C~~~ 85 (212)
T 1f97_A 8 QSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTF-SSSGITFSSVTR-KDNGEYTCMVS 85 (212)
T ss_dssp CSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEE-ETTEEEESCCCG-GGCEEEEEEEE
T ss_pred CCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEe-eceeEEEcccCc-ccCeEEEEEEE
Confidence 45567889999999999998888999999987652 12233333 347899999997 99999999999
Q ss_pred eCCCC-CccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCE-eccccc
Q psy14532 187 NKQGR-SSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGL-PILSAM 250 (258)
Q Consensus 187 ~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~-~l~~~~ 250 (258)
+..+. ..+..+.|.|..+|.+...+....+..|+.+.|.|.+..+.|.+.+.|+++|. .+....
T Consensus 86 ~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~ 151 (212)
T 1f97_A 86 EEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADA 151 (212)
T ss_dssp ETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC---
T ss_pred ccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccc
Confidence 98652 23567788888888877666667788999999999944789999999999999 876543
No 248
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.78 E-value=4.4e-18 Score=124.25 Aligned_cols=179 Identities=11% Similarity=0.109 Sum_probs=105.6
Q ss_pred ceeeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCc
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGT 75 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 75 (258)
+.+.+..+.+.+|++|+|.|.+.+. +...+.|+|.. .....- ..............+..|..+.. +.+
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l---~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 80 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFL---LYVLATPTHIFLDKEYKKMEASKNPSASTSI 80 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEE---EEECSSCCCEEEESSSSEEEEEECCTTTEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEE---EEEecCCeeecCcccCCeEEEEEcCCCCEEE
Confidence 4556778889999999999998764 45689999852 111000 00000000000000222222221 237
Q ss_pred EEEeecccCCCceEEEEEEEeC---CcceeeceEEEEEec---------CC--eeccCCCcceecCCcEEEEeeeCcc-c
Q psy14532 76 LLIENVQKDHDRGVYWCTATNK---QGRSSSQNVHISVTG---------AP--FVRPMGNVSAIAGEPLYLGCPVAGY-P 140 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~---~~~~~~~~~~l~v~~---------~~--~~~~~~~~~~~~g~~~~l~C~~~~~-~ 140 (258)
|.|.++ +.+|+|.|.|.+.+. ..........|.|.. ++ .+..+....+..|+.+.|.|.+.+. |
T Consensus 81 L~I~~v-~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P 159 (230)
T 1ypz_F 81 LTIYSL-EEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFP 159 (230)
T ss_dssp EEECSC-CGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESS
T ss_pred EEECcC-ChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecC
Confidence 999999 999999999999874 111222445777762 12 1111222334568899999999875 7
Q ss_pred C-ceEEEEe-CCcccCCCcc-eEEecCC------eEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 141 I-ESITWQK-GVQQLPLNRR-QKVFPNG------TLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 141 ~-~~i~W~~-~~~~~~~~~~-~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
. +.++|++ ++..+..... .....++ .|.|.+.. . .|.|+|.+.|...
T Consensus 160 ~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~--~-~~~ytC~v~~~~~ 215 (230)
T 1ypz_F 160 DVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERA--M-GKEHRCIVKHENN 215 (230)
T ss_dssp CCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGG--T-TSCEEEEEECSSC
T ss_pred CCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhh--C-CCEEEEEEEECCC
Confidence 5 5999999 7766542211 0111222 45665543 2 4999999999865
No 249
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.78 E-value=3.2e-19 Score=127.44 Aligned_cols=123 Identities=19% Similarity=0.192 Sum_probs=92.6
Q ss_pred CcceecCCcEEEEee---eCcccCceEEEEeCCcccCCC-----------------cceEE---ecCCeEEEEecccCCC
Q psy14532 121 NVSAIAGEPLYLGCP---VAGYPIESITWQKGVQQLPLN-----------------RRQKV---FPNGTLLIENVQKDHD 177 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~---~~~~~~~~i~W~~~~~~~~~~-----------------~~~~~---~~~~~l~i~~~~~~~~ 177 (258)
.+.+..|+.++|.|. +.+.|.+.|.|+|++...... ....+ .....|.|.++.. +|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D 80 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANI-SH 80 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCG-GG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCH-HH
Confidence 356789999999995 456788999999987543210 01111 1123699999997 99
Q ss_pred CcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEec
Q psy14532 178 RGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPI 246 (258)
Q Consensus 178 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l 246 (258)
+|.|+|.+.|..+ .....+.|.|..+|.+...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+
T Consensus 81 ~G~Y~C~a~n~~g-~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~-~G~P~P~v~W~~~~~~~ 147 (203)
T 4fa8_A 81 DGNYLCRMKLGET-EVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTV-NAFPHPHVQWLMPEGVE 147 (203)
T ss_dssp CEEEEEEEEETTE-EEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEE-EEESCCEEEECCC----
T ss_pred CeEEEEEEEcCCC-cEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEc-CCCCCCEEEEEECCeee
Confidence 9999999999877 3456678888888877766667788999999999999 68999999999866544
No 250
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.78 E-value=1.4e-18 Score=125.70 Aligned_cols=130 Identities=27% Similarity=0.544 Sum_probs=100.1
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc---ceEEecCCeE----EEEecccCCCCcEEEEEEEeCCC
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR---RQKVFPNGTL----LIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~---~~~~~~~~~l----~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ......++.+ .|.++.. +|+|.|+|.+.+..+
T Consensus 15 ~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~-~d~G~Y~C~~~n~~g 93 (217)
T 2vr9_A 15 HPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKE-QDGGEYWCVAKNRVG 93 (217)
T ss_dssp CCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSC-BCCEEEEEEEEETTE
T ss_pred CCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCc-ccCceEEEEEecCCC
Confidence 3556778899999999999988889999999988776431 1222233443 5667776 999999999999877
Q ss_pred CCccceEEEEeec-CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 191 RSSSQNVHISVTV-PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 191 ~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
...+..+.|.|.. +|.+...+....+..|+.+.|.|.+..+.|.+.+.|+++|..+..
T Consensus 94 ~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~ 152 (217)
T 2vr9_A 94 QAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDD 152 (217)
T ss_dssp EEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECC
T ss_pred ccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCc
Confidence 5445566677665 455555555667889999999999866889999999999999884
No 251
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.78 E-value=1.2e-18 Score=124.14 Aligned_cols=132 Identities=24% Similarity=0.356 Sum_probs=102.6
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCC-cceEE--ecCC--eEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLN-RRQKV--FPNG--TLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~-~~~~~--~~~~--~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.+ ..++ .|.|.++.. +|+|.|+|.+.+..+.
T Consensus 10 ~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~n~~g~- 87 (197)
T 2j8h_A 10 ELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTD-DDATVYQVRATNQGGS- 87 (197)
T ss_dssp CCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCG-GGCSEEEEEEEETTEE-
T ss_pred cCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCH-HhCEEEEEEEEECCCc-
Confidence 355678899999999999999889999999999877643 23332 2233 799999997 9999999999998763
Q ss_pred ccceEEEEeecCCccccCC-----CCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccccc
Q psy14532 193 SSQNVHISVTVPPKIAPFE-----FQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMGV 252 (258)
Q Consensus 193 ~~~~~~l~v~~~p~~~~~~-----~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~~ 252 (258)
.+..+.|.|..+|.+.... ....+..|+.+.|.|.+ .+.|.+.+.|+++|..+..+..+
T Consensus 88 ~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~ 151 (197)
T 2j8h_A 88 VSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLIDNNGHY 151 (197)
T ss_dssp EEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEE-EEESCCEEEEEESSCEECSSSSC
T ss_pred eeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEE-EecCCCcEEEEECCEEeecCCCE
Confidence 4667778887766543322 23457789999999999 58899999999999998765543
No 252
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.77 E-value=2.5e-18 Score=123.34 Aligned_cols=125 Identities=11% Similarity=0.162 Sum_probs=93.2
Q ss_pred CCcceecCCcEEEEeeeCc-ccCceEEEEeCCcccCCCcceEEecCC-----eEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 120 GNVSAIAGEPLYLGCPVAG-YPIESITWQKGVQQLPLNRRQKVFPNG-----TLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~-~~~~~i~W~~~~~~~~~~~~~~~~~~~-----~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
....+.+|+.+.|.|.+.+ .|.+.+.|++++..+..+.++.+..+. .|.|.++.. +|+|.|+|.+.|...
T Consensus 10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~-~D~G~Y~C~a~Ng~a--- 85 (207)
T 3rbs_A 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQD-EDEGTYTFQLQDGKA--- 85 (207)
T ss_dssp EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCG-GGCEEEEEEEEETTE---
T ss_pred CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCCh-hhCEEEEEEEECCCe---
Confidence 3467889999999999964 789999999999998776666554332 589999997 999999999999322
Q ss_pred cceEEEEee---------------------cCCccccCCCCCccCCCCeeeEEEEeccCC-CCceeEEEECCEeccccc
Q psy14532 194 SQNVHISVT---------------------VPPKIAPFEFQPDLHSGDRAGVQCLVTKGD-PPLTISWLKNGLPILSAM 250 (258)
Q Consensus 194 ~~~~~l~v~---------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~g~~l~~~~ 250 (258)
.....+.+. .+|.+.... ...+.+|+.+.|.|.+ .+. |.+.|.|++||+.|..+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v-~g~~P~p~i~W~k~g~~l~~~~ 162 (207)
T 3rbs_A 86 TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKV-ANIKKETHIVWYKDEREISVDE 162 (207)
T ss_dssp EEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEE-ESCCTTCEEEEEETTEEECCCC
T ss_pred EEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEE-eCCCCCCEEEEEECCEECCCCC
Confidence 222232211 134332222 3567889999999999 566 899999999999997654
No 253
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.77 E-value=1.8e-18 Score=124.23 Aligned_cols=130 Identities=22% Similarity=0.481 Sum_probs=104.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCccc------------CCCcceEEecCCeEEEEecccCCCCcEEEEEEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQL------------PLNRRQKVFPNGTLLIENVQKDHDRGVYWCTAT 186 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~------------~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~ 186 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....+.... ...|.|.++.. +|+|.|+|.+.
T Consensus 11 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~~~~-~d~G~Y~C~~~ 88 (209)
T 1nbq_A 11 EPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-PTGITFKSVTR-EDTGTYTCMVS 88 (209)
T ss_dssp CSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-TTEEECSCCCT-TSCSEEEEEEE
T ss_pred CCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-ccEEEEeeCCH-HHCcEEEEEEe
Confidence 45567889999999999998888999999987652 122333332 37899999997 99999999999
Q ss_pred eCCCC-CccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 187 NKQGR-SSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 187 ~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
+..+. ..+..+.|.|..+|.+........+..|+.+.|.|.+..+.|.+.+.|+++|..+....
T Consensus 89 ~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~ 153 (209)
T 1nbq_A 89 EEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNP 153 (209)
T ss_dssp ETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCS
T ss_pred cCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCcc
Confidence 97642 23567788888888877666666788999999999975789999999999999887654
No 254
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.77 E-value=1.9e-18 Score=135.95 Aligned_cols=133 Identities=23% Similarity=0.429 Sum_probs=106.8
Q ss_pred eeccCCCcceecCCcEEEEeeeCcccCceEEEEeC--CcccCC-----CcceEEe---cCCeEEEEecccCCCCcEEEEE
Q psy14532 115 FVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKG--VQQLPL-----NRRQKVF---PNGTLLIENVQKDHDRGVYWCT 184 (258)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~--~~~~~~-----~~~~~~~---~~~~l~i~~~~~~~~~g~y~C~ 184 (258)
.+..+....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.. ..++.+. ..+.|.|.++.. +|+|.|+|.
T Consensus 3 ~i~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~ 81 (389)
T 2jll_A 3 HIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKL-SDSGRYDCE 81 (389)
T ss_dssp EEEECCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCG-GGCEEEEEE
T ss_pred eEEecCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccCh-hhCEEEEEE
Confidence 33345566788899999999999999999999998 666543 2344443 235799999997 999999999
Q ss_pred EEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 185 ATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 185 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
|.|..+. .+..+.|.|..+|.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+....
T Consensus 82 a~n~~g~-~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~ 145 (389)
T 2jll_A 82 AASRIGG-HQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDV-KSNPPASIHWRRDKLVLPAKN 145 (389)
T ss_dssp EECSSCE-EEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECE-EEESCCEEEEEETTEESSCTT
T ss_pred EEeCCCC-cceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEE-EecCCCeEEEEECCccCCccc
Confidence 9998884 567888999888877655544467889999999999 588899999999999987654
No 255
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.76 E-value=3e-18 Score=122.04 Aligned_cols=121 Identities=17% Similarity=0.228 Sum_probs=81.4
Q ss_pred cceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcce--EEecCCeEEEEecccCCCCcEEEEEEEeCCCC-CccceEE
Q psy14532 122 VSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQ--KVFPNGTLLIENVQKDHDRGVYWCTATNKQGR-SSSQNVH 198 (258)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~-~~~~~~~ 198 (258)
..+.+|++++|.|.+.+.+. .+.|++++..+...... .....+.|.|.++.. +|+|.|+|.+.|..+. ..+..+.
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~~~~s~~~~ 91 (196)
T 2d3v_A 14 SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTE-HHAGRYRCYYYSPAGWSEPSDPLE 91 (196)
T ss_dssp SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCG-GGCEEEEEEEEETTEECBCCCCEE
T ss_pred CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCCh-hHCeEEEEEEeCCCCcCCcCccEE
Confidence 47889999999999987665 99999999876532211 112345799999997 9999999999987653 2356677
Q ss_pred EEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecc
Q psy14532 199 ISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPIL 247 (258)
Q Consensus 199 l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~ 247 (258)
|.|.. +|.+...+ ...+.+|+.++|.|.+ .+.| +.|.|+++|..+.
T Consensus 92 l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~-~~~p-~~~~W~k~g~~~~ 140 (196)
T 2d3v_A 92 LVVTGFYNKPTLSALP-SPVVTSGENVTLQCGS-RLRF-DRFILTEEGDHKL 140 (196)
T ss_dssp EEEECSSCCCEEEC------------CEEEEEE-SSCC-SEEEEEEC---CC
T ss_pred EEecCCCCCCeEEccC-CccccCCCcEEEEEEc-CCCC-CEEEEEccCCccc
Confidence 88776 34443333 2468899999999999 5777 8999999998875
No 256
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.76 E-value=9.6e-18 Score=122.63 Aligned_cols=180 Identities=17% Similarity=0.241 Sum_probs=100.1
Q ss_pred eeceeeeecCCCceEEEEEEeec--CCCeE--EEeeCCEeCcCCcccccee-ccc--ceeeccccccceeeee-----CC
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN--PTPHI--SWKLDGYPLAGDRHENKNR-IGE--ARVQQLPLNRRQKVFP-----NG 74 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~--~~~~v--~W~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~-----~~ 74 (258)
..+..+.+.+|++|+|.|.+.+. ....+ .|||........ ....+. .+. .......+..|..+.. +.
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 83 (232)
T 3qhz_H 5 RESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALE-WLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQV 83 (232)
T ss_dssp EEECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCE-EEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEE
T ss_pred EcCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcE-EEEEEECCCCccccccCccccCceEEEeccCCCEE
Confidence 34556789999999999998753 22344 999842100000 000000 000 0011112223333332 23
Q ss_pred cEEEeecccCCCceEEEEEEEeCCc-------ceeeceEEEEEec----CCeec-cCCCcceecCCcEEEEeeeCcccC-
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQG-------RSSSQNVHISVTG----APFVR-PMGNVSAIAGEPLYLGCPVAGYPI- 141 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~~-------~~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~- 141 (258)
+|.|.++ +.+|+|.|.|.+.+..+ ........|.|.. .|.+. ......+..|+.+.|.|.+.+.++
T Consensus 84 sL~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~ 162 (232)
T 3qhz_H 84 VLTMTNM-DPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (232)
T ss_dssp EEEECSC-CGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSS
T ss_pred EEEECcC-ChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCC
Confidence 6999999 99999999999986521 1122445667752 23333 233344567999999999987443
Q ss_pred -ceEEEEeCCcccCCCcce-EEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 142 -ESITWQKGVQQLPLNRRQ-KVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 142 -~~i~W~~~~~~~~~~~~~-~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
..+.|++++..+...... ....+ +.|.|.+... .| |.|+|.|.|..+
T Consensus 163 ~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-g~ytC~v~~~~~ 217 (232)
T 3qhz_H 163 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 217 (232)
T ss_dssp CCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGG-GT-CCCEEEEEEGGG
T ss_pred CeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhc-CC-CEEEEEEEeCCC
Confidence 368899987643211111 11112 3577777765 77 999999999754
No 257
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.76 E-value=8.5e-18 Score=120.39 Aligned_cols=117 Identities=16% Similarity=0.239 Sum_probs=94.5
Q ss_pred CCcceecCCcEEEEeeeCcccCce-EEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEE
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPIES-ITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVH 198 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~-i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 198 (258)
....+.+|+.+.|.|.+.+.|.+. +.|++++..+... .+.|.|.++.. +|+|.|+|.+.+. ..+..+.
T Consensus 15 ~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~-------~~~L~i~~v~~-~D~G~Y~C~a~n~---~~s~~~~ 83 (204)
T 3sgj_C 15 QWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ-------ASSYFIDAATV-DDSGEYRCQTQLS---TLSDPVQ 83 (204)
T ss_dssp CCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC-------SSEEEESSCCG-GGCEEEEEEETTS---BCCCCEE
T ss_pred CCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC-------ccEEEEecccc-cCCEEEEEEeCCC---cccccEE
Confidence 336788999999999999887664 9999998876543 27899999997 9999999999874 3456778
Q ss_pred EEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 199 ISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 199 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
|.|..+|.+...+ ...+.+|+.++|.|.+..+.|.+.|.|+++|..+..
T Consensus 84 l~V~~~p~~~~~~-~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~ 132 (204)
T 3sgj_C 84 LEVHIGWLLLQAP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY 132 (204)
T ss_dssp EEEECSSEEEECS-CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE
T ss_pred EEEecCceEecCC-ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec
Confidence 8888777554444 356778999999999966667789999999998753
No 258
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.76 E-value=1.6e-17 Score=117.12 Aligned_cols=124 Identities=18% Similarity=0.256 Sum_probs=93.3
Q ss_pred CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCC-
Q psy14532 113 APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGR- 191 (258)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~- 191 (258)
+|.+...+...+.+|++++|.|.+.+ +.+.+.|++++.. .....+.|.|.++.. +|+|.|+|.+.|..+.
T Consensus 8 ~P~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~-------~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~~ 78 (184)
T 2gi7_A 8 KPSLQALPSSLVPLEKPVTLRCQGPP-GVDLYRLEKLSSS-------RYQDQAVLFIPAMKR-SLAGRYRCSYQNGSLWS 78 (184)
T ss_dssp CCEEEEESCSEEETTCCEEEEEECST-TCSEEEEEETTTC-------CEESSSEEEESSCCG-GGCEEEEEEEEETTEEB
T ss_pred CCeEEeCCCccccCCCcEEEEEeCCC-CCCEEEEEECCcc-------ccCcccEEEECcCCh-hhCceEEEEEEcCCCcc
Confidence 34433333347889999999999987 7789999998876 123567899999997 9999999999997652
Q ss_pred CccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 192 SSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 192 ~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
..+..+.|.|.. +|.+...+ ...+.+|+.++|.|.+ .+.| +.+.|+++|..+..
T Consensus 79 ~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~-~~~~-~~~~w~k~g~~~~~ 135 (184)
T 2gi7_A 79 LPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQT-RYGF-DQFALYKEGDPAPY 135 (184)
T ss_dssp CCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEEC-SSCC-CEEEEEECCCCTTS
T ss_pred CCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEc-CCCC-cEEEEEECCCcCcc
Confidence 345667777744 34444334 4567899999999998 4544 69999999988764
No 259
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.76 E-value=2.1e-17 Score=121.32 Aligned_cols=178 Identities=15% Similarity=0.243 Sum_probs=104.2
Q ss_pred eeceeeeecCCCceEEEEEEeecC----CCeEEEeeCC--EeCcCCcccccee------cccceeeccccccceeeee--
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGNP----TPHISWKLDG--YPLAGDRHENKNR------IGEARVQQLPLNRRQKVFP-- 72 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~~----~~~v~W~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-- 72 (258)
..+..+.+.+|++|+|.|.+.+.+ ...+.|||.. .....- .... .+........+..|..+..
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~ 81 (239)
T 3tv3_H 5 QESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWV---GSLSHCASYWNRGWTYHNPSLKSRLTLALDT 81 (239)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEE---EEEECCCCTTSSCEEEECTTTGGGEEEEEEG
T ss_pred ecCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEE---EEEecccccccCCceecCccccCCEEEEEEC
Confidence 345678899999999999998754 3489999842 111000 0000 0000111112223333322
Q ss_pred ---CCcEEEeecccCCCceEEEEEEEeCCc------------ceeeceEEEEEec----CCeec-cCCCcceecCCcEEE
Q psy14532 73 ---NGTLLIENVQKDHDRGVYWCTATNKQG------------RSSSQNVHISVTG----APFVR-PMGNVSAIAGEPLYL 132 (258)
Q Consensus 73 ---~~~l~i~~~~~~~d~G~Y~C~~~~~~~------------~~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~~~l 132 (258)
+.+|.|.++ +.+|+|.|.|.+.+..+ ........|.|.. .|.+. ......+..|+.+.|
T Consensus 82 ~~~~~~L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l 160 (239)
T 3tv3_H 82 PKNLVFLKLNSV-TAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAAL 160 (239)
T ss_dssp GGTEEEEEECSC-CGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEE
T ss_pred CCCEEEEEECCC-ChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEE
Confidence 235999999 99999999999986531 1112344566642 23332 233344567999999
Q ss_pred EeeeCc-ccCc-eEEEEeCCcccCCCcce-EEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 133 GCPVAG-YPIE-SITWQKGVQQLPLNRRQ-KVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 133 ~C~~~~-~~~~-~i~W~~~~~~~~~~~~~-~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.|.+.+ .|.+ .+.|++++..+...... ....+ +.|.|..... +| |.|+|.|.|..+
T Consensus 161 ~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-~~ytC~v~h~~~ 225 (239)
T 3tv3_H 161 GCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 225 (239)
T ss_dssp EEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGT-TT-CCCEEEEEEGGG
T ss_pred EEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhc-CC-CEEEEEEEECCC
Confidence 999987 4534 58999987643221111 11122 2467777665 77 999999999754
No 260
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.75 E-value=8.3e-18 Score=106.00 Aligned_cols=95 Identities=24% Similarity=0.446 Sum_probs=75.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||+|...+.++.+.+|+++.|.|.+.|.|.+.+.|+|++..+..... .++.+. ......+|.|.++
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~-~~~~~~-------------~~~~~~~L~I~~~ 70 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQ-GRFHIE-------------NTDDLTTLIIMDV 70 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGG-GTEEEE-------------ECSSEEEEEESSC
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeecc-ceeeee-------------cccceEEEEEcCC
Confidence 78898889999999999999999999999999999999998865421 122111 0011246999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEec
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
+.+|+|.|+|.+.|..|... ..+.|.|..
T Consensus 71 -~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~ 99 (100)
T 3knb_A 71 -QKQDGGLYTLSLGNEFGSDS-ATVNIHIRS 99 (100)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEEC
T ss_pred -CccCCEEEEEEEEECCCEEE-EEEEEEEEE
Confidence 99999999999999998776 777887753
No 261
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.75 E-value=3.2e-17 Score=119.69 Aligned_cols=176 Identities=17% Similarity=0.291 Sum_probs=103.7
Q ss_pred eeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeeeeC-----CcE
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVFPN-----GTL 76 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~l 76 (258)
..+..+.+.+|++|+|.|.+.+. ....+.|||.. ...... ..... .........+..|..+..+ .+|
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (230)
T 3n9g_H 5 VQSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWM---GIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYM 81 (230)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEE---EEECTTTCCEEECGGGTTTEEEEEETTTTEEEE
T ss_pred EecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEE---EEEecCCCceecCcccCCcEEEEecCCCCEEEE
Confidence 34456889999999999998752 34589999842 110000 00000 0000111122233333322 249
Q ss_pred EEeecccCCCceEEEEEEEeCC-------cceeeceEEEEEec----CCeec-cCCCcceecCCcEEEEeeeCcc-c-Cc
Q psy14532 77 LIENVQKDHDRGVYWCTATNKQ-------GRSSSQNVHISVTG----APFVR-PMGNVSAIAGEPLYLGCPVAGY-P-IE 142 (258)
Q Consensus 77 ~i~~~~~~~d~G~Y~C~~~~~~-------~~~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~-~~ 142 (258)
.|.++ +.+|+|.|.|.+.+.. .........|.|.. +|.+. ......+..|+.+.|.|.+.+. | ..
T Consensus 82 ~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~ 160 (230)
T 3n9g_H 82 ELSSL-RSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 160 (230)
T ss_dssp EECSC-CGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCC
T ss_pred EECCC-ChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCE
Confidence 99999 9999999999998753 11122445677752 23222 2333345689999999999874 4 35
Q ss_pred eEEEEeCCcccCCCcc---eEEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 143 SITWQKGVQQLPLNRR---QKVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 143 ~i~W~~~~~~~~~~~~---~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.+.| ++..+..... .....+ +.|.|..... +| |.|+|.|.|...
T Consensus 161 ~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-~~ytC~v~h~~~ 213 (230)
T 3n9g_H 161 TVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 213 (230)
T ss_dssp EEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTB-TT-BCCEEEEEEGGG
T ss_pred EEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHc-CC-CeEEEEEEECCC
Confidence 7999 5554432110 111222 2577777775 78 999999999754
No 262
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.75 E-value=3.8e-17 Score=117.21 Aligned_cols=174 Identities=17% Similarity=0.209 Sum_probs=107.5
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee------CCc
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP------NGT 75 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 75 (258)
.+...+..+.+.+|++|+|.|.+.+.. +.+.|+|.. .....- .. ... ......|..+.. +.+
T Consensus 3 ~v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~---~~--~~~----~~~~~~R~~~~~~~~~~~~~~ 72 (207)
T 1ypz_E 3 QVEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISL---FY--LAS----GTKENGRLKSAFDSKERRYST 72 (207)
T ss_dssp SEEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEE---EE--ESS----EEEEETTEEEEECTTTCSEEE
T ss_pred ccEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEE---EE--Ecc----CCccCCCEEEEeccCCCCEEE
Confidence 355667888999999999999987653 489999853 111000 00 000 001112222222 357
Q ss_pred EEEeecccCCCceEEEEEEEeCCc---------c-eeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcc-cC-ce
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQG---------R-SSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGY-PI-ES 143 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~---------~-~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~ 143 (258)
|.|.++ +.+|+|.|.|.+.+..+ . .......|.|.........+.+.+..+ .+.|.|.+.+. |. +.
T Consensus 73 L~I~~v-~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~~~~-~~~l~C~~~g~~P~~~~ 150 (207)
T 1ypz_E 73 LHIRDA-QLEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFIMKN-GTNVACLVKDFYPKEVT 150 (207)
T ss_dssp EEECSC-CGGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEEEEE-TTEEEEEEEEESSSCCE
T ss_pred EEECCC-CHHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEEeCC-CCeEEEEEeeEeCCCeE
Confidence 999999 99999999999987632 1 122345777775322112222333332 47999999874 54 69
Q ss_pred EEEEeCCcccCCC-cceEEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 144 ITWQKGVQQLPLN-RRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 144 i~W~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+.|+++ ..+... .......++++.+......++.|.|+|.+.|..+
T Consensus 151 v~W~~~-~~l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 151 ISLRSS-KKIVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp EEEECS-SEEEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTE
T ss_pred EEEecC-CcccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCc
Confidence 999998 655432 2222345677777655433678999999999754
No 263
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.75 E-value=8.2e-18 Score=130.21 Aligned_cols=174 Identities=14% Similarity=0.242 Sum_probs=104.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeec-CC-CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGN-PT-PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~-~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.+...+....+.+|++++|.|.+.+. |. +.+.|++++..+..... ...... . ........|.|.
T Consensus 120 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~-~~~~~~---------~--~~~~~~s~L~i~ 187 (344)
T 1za6_B 120 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF-PAVLQS---------S--GLYSLSSVVTVP 187 (344)
T ss_dssp CCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEEC-CCEECT---------T--SCEEEEEEEEEE
T ss_pred CCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeEC-CCeECC---------C--CCEEEEEEEEEc
Confidence 3455444444557899999999999986 64 69999999865421100 000000 0 011123468898
Q ss_pred ecccCCCceEEEEEEEeCCccee-eceEEEE----------------------EecCCeecc-CCCcceecCCcEEEEee
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSS-SQNVHIS----------------------VTGAPFVRP-MGNVSAIAGEPLYLGCP 135 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~-~~~~~l~----------------------v~~~~~~~~-~~~~~~~~g~~~~l~C~ 135 (258)
++ ..+| |.|+|.+.+..+... ...+.+. +..+|.+.. ........|+.+.|.|.
T Consensus 188 ~~-~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~ 265 (344)
T 1za6_B 188 SS-SLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCL 265 (344)
T ss_dssp TT-HHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCEEEEECCCGGGGGSSSEEEEEE
T ss_pred HH-HcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEE
Confidence 88 7777 999999999876532 1212111 112333222 12222335667999999
Q ss_pred eCcc-c-CceEEEEeCCcccCCCcce--EEecCCe------EEEEecccCCCCcEEEEEEEeCCC
Q psy14532 136 VAGY-P-IESITWQKGVQQLPLNRRQ--KVFPNGT------LLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 136 ~~~~-~-~~~i~W~~~~~~~~~~~~~--~~~~~~~------l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+.|. | .+.++|++++..+...... ....+++ |.|..... +|+|.|+|.|.|...
T Consensus 266 ~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~-~~~g~YtC~a~~~~l 329 (344)
T 1za6_B 266 VKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRW-QQGNVFSCSVMHEAL 329 (344)
T ss_dssp EEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHH-HTTCEEEEEEECTTS
T ss_pred EeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHc-cCCCeEEEEEEcCCC
Confidence 9885 4 3589999999877543221 1234443 34444443 679999999999754
No 264
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.75 E-value=2e-17 Score=121.96 Aligned_cols=179 Identities=17% Similarity=0.296 Sum_probs=102.4
Q ss_pred eeeceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCcccccee-cccceeeccccccceeeee-----CCc
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNR-IGEARVQQLPLNRRQKVFP-----NGT 75 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~ 75 (258)
+..+..+.+.+|++|+|.|.+.+. ....+.|||.. .....- .... .+........+..|..... +.+
T Consensus 3 l~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 79 (248)
T 3u2s_H 3 LVESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWV---AFIKYDGSEKYHADSVWGRLSISRDNSKDTLY 79 (248)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEE---EEECTTSSCEEECTTTTTTEEEEEEGGGTEEE
T ss_pred eecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEE---EEEecCCCceecCcccCCcEEEEecCCCCEEE
Confidence 456677889999999999999752 34589999842 110000 0000 0000011112223333322 235
Q ss_pred EEEeecccCCCceEEEEEEEeCC---------------------cceeeceEEEEEec----CCeec-cCCCcceecCCc
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQ---------------------GRSSSQNVHISVTG----APFVR-PMGNVSAIAGEP 129 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~---------------------~~~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~ 129 (258)
|.|.++ +.+|+|.|.|.+.+.. .........|.|.. .|.+. ..+...+..|+.
T Consensus 80 L~I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~ 158 (248)
T 3u2s_H 80 LQMNSL-RVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGT 158 (248)
T ss_dssp EEECSC-CGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CE
T ss_pred EEECCC-CHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCc
Confidence 999999 9999999999998642 11122445677752 22222 123334556899
Q ss_pred EEEEeeeCc-cc-CceEEEEeCCcccCCCcc-eEEecCC------eEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 130 LYLGCPVAG-YP-IESITWQKGVQQLPLNRR-QKVFPNG------TLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 130 ~~l~C~~~~-~~-~~~i~W~~~~~~~~~~~~-~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+.|.|.+.+ .| ...+.|++++........ .....++ .|.|..... ++ |.|+|.|.|...
T Consensus 159 ~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-~~ytC~v~h~~~ 226 (248)
T 3u2s_H 159 AALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 226 (248)
T ss_dssp EEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGB-TT-BCCEEEEEEGGG
T ss_pred EEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhc-CC-CeEEEEEEECCC
Confidence 999999987 45 457999998764321111 1112222 466766665 67 999999999754
No 265
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.75 E-value=7e-18 Score=121.49 Aligned_cols=132 Identities=27% Similarity=0.536 Sum_probs=99.3
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc-----ceEEecCCeEEE-----EecccCCCCcEEEEEEEe
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR-----RQKVFPNGTLLI-----ENVQKDHDRGVYWCTATN 187 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~-----~~~~~~~~~l~i-----~~~~~~~~~g~y~C~~~~ 187 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ......++.+.+ .++.. +|+|.|+|.+.+
T Consensus 15 ~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~n 93 (212)
T 2v9r_A 15 HPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSR-PDEGVYVCVARN 93 (212)
T ss_dssp CCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCC-CSCEEEEEEEEE
T ss_pred CCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCc-ccCeEEEEEEEC
Confidence 3456778899999999999988889999999987765332 122334444444 34565 899999999999
Q ss_pred CCCCCccceEEEEeec-CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 188 KQGRSSSQNVHISVTV-PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 188 ~~~~~~~~~~~l~v~~-~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
..+...+..+.|.|.. ++.+...+....+..|+.+.|.|.+..+.|.+.+.|+++|..+....
T Consensus 94 ~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~ 157 (212)
T 2v9r_A 94 YLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKD 157 (212)
T ss_dssp TTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTS
T ss_pred CCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCc
Confidence 8765445667777765 33444445556788999999999985688899999999999998654
No 266
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.75 E-value=4.6e-17 Score=121.06 Aligned_cols=175 Identities=17% Similarity=0.271 Sum_probs=98.5
Q ss_pred eceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeee-----CCcEEE
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFP-----NGTLLI 78 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~i 78 (258)
.+..+.+.+|++|+|.|.+.+.. ...+.|||.. .....- ..............+..|..+.. +.+|.|
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l---~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 82 (263)
T 3iu4_H 6 ESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWL---GMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKM 82 (263)
T ss_dssp EECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEE---EEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEE
T ss_pred CCCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEE---EEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEE
Confidence 34468899999999999987532 4589999842 111000 00000000011112223333322 234999
Q ss_pred eecccCCCceEEEEEEEeCCc-------ceeeceEEEEEec----CCeec-cCCCcceecCCcEEEEeeeCcc-c-CceE
Q psy14532 79 ENVQKDHDRGVYWCTATNKQG-------RSSSQNVHISVTG----APFVR-PMGNVSAIAGEPLYLGCPVAGY-P-IESI 144 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~-------~~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~~~~l~C~~~~~-~-~~~i 144 (258)
.++ +.+|+|.|.|.+.+... ........|.|.. +|.+. ......+..|+.+.|.|.+.+. | .+.+
T Consensus 83 ~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v 161 (263)
T 3iu4_H 83 NSL-QTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTV 161 (263)
T ss_dssp CSC-CGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEE
T ss_pred CCC-CHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEE
Confidence 999 99999999999987531 1112444677742 23332 2233335578999999999874 4 3689
Q ss_pred EEEeCCcccCCCc---ceEEecCC------eEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 145 TWQKGVQQLPLNR---RQKVFPNG------TLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 145 ~W~~~~~~~~~~~---~~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+| ++..+.... ......++ .|.|..... +| |.|+|.|.|...
T Consensus 162 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-~~ytC~v~h~~~ 212 (263)
T 3iu4_H 162 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 212 (263)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHH-HH-CCCEEEEEEGGG
T ss_pred EE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHc-CC-CEEEEEEEECCC
Confidence 99 444332111 01112222 577777765 67 999999999754
No 267
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.75 E-value=1.2e-17 Score=121.99 Aligned_cols=132 Identities=17% Similarity=0.282 Sum_probs=101.5
Q ss_pred cCCCcceecCCcEEEEeeeCcccC-ceEEEEeCCcccC-------------CCcceE----------EecCCeEEEEecc
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPI-ESITWQKGVQQLP-------------LNRRQK----------VFPNGTLLIENVQ 173 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~-~~i~W~~~~~~~~-------------~~~~~~----------~~~~~~l~i~~~~ 173 (258)
.+....+.+|+.+.|.|.+.+.+. +.+.|++++.... ...+.. +..++.|.|.++.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 345677899999999999998874 8999998655422 122333 4555779999999
Q ss_pred cCCCCcEEEEEEEeCCCCCccceEEEEeecCCcccc---CCCCCccCCCCee-eEEEEeccCCCCceeEEEECCEecccc
Q psy14532 174 KDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAP---FEFQPDLHSGDRA-GVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~---~~~~~~~~~g~~~-~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
. +|+|.|+|.+.+......+..+.|.|..+|..+. .+....+..|+.+ .|.|.+..+.|.+.+.|+++|..+...
T Consensus 86 ~-~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~ 164 (231)
T 2pet_A 86 V-GDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVP 164 (231)
T ss_dssp G-GGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCC
T ss_pred c-ccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccc
Confidence 8 9999999999998632456778888887765433 3344557789988 999999668899999999999999776
Q ss_pred c
Q psy14532 250 M 250 (258)
Q Consensus 250 ~ 250 (258)
.
T Consensus 165 ~ 165 (231)
T 2pet_A 165 V 165 (231)
T ss_dssp S
T ss_pred c
Confidence 5
No 268
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.74 E-value=1.9e-17 Score=119.77 Aligned_cols=131 Identities=15% Similarity=0.151 Sum_probs=93.7
Q ss_pred CeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceE--EecCC--eEEEEecccCCCCcEEEEEEEeCC
Q psy14532 114 PFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQK--VFPNG--TLLIENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 114 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~--~~~~~--~l~i~~~~~~~~~g~y~C~~~~~~ 189 (258)
|.+...+...+.+|+.++|.|.+.+ +.+.+.|+|++..+....... ....+ .|.|.+++. +|+|.|+|.+.+..
T Consensus 10 P~i~~~p~~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~ 87 (218)
T 1uct_A 10 PFISAKSSPVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDA-NKAGRYQCQYRIGH 87 (218)
T ss_dssp CCEEESSCSEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCG-GGCEEEEEEEEETT
T ss_pred CEEEecCCCccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEccccc-ccCEEEEEEEEcCC
Confidence 3333333356889999999999987 678999999987654222111 12334 899999997 99999999999975
Q ss_pred C-CCccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 190 G-RSSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 190 ~-~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
+ ...+..+.|.|.. +|.+...+ ...+.+|+.++|.|.+ .+.|.+.|.|+|+|..+..
T Consensus 88 ~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~-~~~~~~~~~W~k~g~~~~~ 148 (218)
T 1uct_A 88 YRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSS-AHIPFDRFSLAKEGELSLP 148 (218)
T ss_dssp TEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEEC-SSSCCSEEEEEETTCSSCC
T ss_pred CceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeC-CCCCCCEEEEEECCCcccc
Confidence 4 2335667777765 34443333 4568899999999976 4667789999999987753
No 269
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.74 E-value=1.7e-17 Score=116.03 Aligned_cols=123 Identities=17% Similarity=0.266 Sum_probs=91.4
Q ss_pred cceecCCcEEEEeeeCc--ccCceEEEEeCCccc----------CCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCC
Q psy14532 122 VSAIAGEPLYLGCPVAG--YPIESITWQKGVQQL----------PLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 122 ~~~~~g~~~~l~C~~~~--~~~~~i~W~~~~~~~----------~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~ 189 (258)
+.+.+|+.+.|.|.... .+.+.|.|++++..+ ....++.+..++.|.|.++.. +|+|.|+|.+.|..
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~-~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTR-DDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCG-GGCEEEEEEEEETT
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEccccc-ccCEEEEEEEEeCC
Confidence 45678999999995433 456789999988533 234556666788899999998 99999999999988
Q ss_pred CCC-ccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccccc
Q psy14532 190 GRS-SSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 190 ~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
+.. .+..+.|.|..++..+.. ...+..+.|.|.+ .+.|.+.|.|+++|+.+..+..
T Consensus 85 g~~~~~~~~~l~V~~~~~~p~i-----~~~~~~v~L~C~~-~g~p~p~i~W~~~g~~l~~~~~ 141 (176)
T 1hng_A 85 GTRILNKALDLRILEMVSKPMI-----YWECSNATLTCEV-LEGTDVELKLYQGKEHLRSLRQ 141 (176)
T ss_dssp CCEEEEEEEEEEEECCCCCCEE-----EEETTTTEEEEEC-SSCSSCEEEEEETTEEEEEESS
T ss_pred CCEEEEEEEEEEEeCCCCCCEE-----EecCCcEEEEEEe-cCCCCcEEEEEECCEECCCCCc
Confidence 754 356677777764332111 1224569999999 5778899999999999876543
No 270
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.74 E-value=1.6e-17 Score=117.65 Aligned_cols=124 Identities=26% Similarity=0.501 Sum_probs=99.6
Q ss_pred CcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEec-CCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEE
Q psy14532 121 NVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFP-NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHI 199 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 199 (258)
...+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..+.. ...|.|.++.. +|+|.|+|.+.+..+. ....+.|
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~~~~~~-~~~~~~l 90 (192)
T 2va4_A 13 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIIN-SDGGPYVCRATNKAGE-DEKQAFL 90 (192)
T ss_dssp EEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCG-GGCEEEEEEEEETTEE-EEEEEEE
T ss_pred EEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCCh-hcCcEEEEEEEccccc-cceEEEE
Confidence 3567789999999999988889999999998887766655543 45799999997 9999999999998763 3466778
Q ss_pred EeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEEC--CEeccc
Q psy14532 200 SVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKN--GLPILS 248 (258)
Q Consensus 200 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~--g~~l~~ 248 (258)
.|..+|.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|+++ +..+..
T Consensus 91 ~V~~~p~~~~~~-~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~ 139 (192)
T 2va4_A 91 QVFVQPHIIQLK-NETTYENGQVTLVCDA-EGEPIPEITWKRAVDGFTFTE 139 (192)
T ss_dssp EEEEEEEEEEEC-CEEECTTSEEEEEEEE-EEESCCEEEEEETTTTEEECT
T ss_pred EEEccCcccccC-cceEEeCCeEEEEEEe-cCCCCCcEEEEeCCCCceeec
Confidence 887777655433 3456779999999999 6789999999998 666654
No 271
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.74 E-value=1.5e-17 Score=119.94 Aligned_cols=130 Identities=21% Similarity=0.328 Sum_probs=93.1
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccC------------CCcceEEec---CCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLP------------LNRRQKVFP---NGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g~y 181 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|+++. .... ...++.+.. ..+|.|.+++. +|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 86 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC-ADAATY 86 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG-GGCEEE
T ss_pred CCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh-HHCEEE
Confidence 44567889999999999998888999999843 2111 022333322 23699999997 999999
Q ss_pred EEEEEeCCCC--CccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 182 WCTATNKQGR--SSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 182 ~C~~~~~~~~--~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
+|.+.+..+. .......|.|.. +|.+...+....+..|+.++|.|.+.++.|.+.|.|+++|..+..+
T Consensus 87 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~ 159 (213)
T 3nl4_L 87 YCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTG 159 (213)
T ss_dssp EEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSS
T ss_pred EEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCC
Confidence 9999987653 233445566633 4444433334456679999999999654889999999999998753
No 272
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.74 E-value=1.9e-17 Score=119.37 Aligned_cols=128 Identities=18% Similarity=0.299 Sum_probs=94.3
Q ss_pred CcceecCCcEEEEeeeCcccCceEEEEeC--CcccC------------CCcceEE---ecCCeEEEEecccCCCCcEEEE
Q psy14532 121 NVSAIAGEPLYLGCPVAGYPIESITWQKG--VQQLP------------LNRRQKV---FPNGTLLIENVQKDHDRGVYWC 183 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~i~W~~~--~~~~~------------~~~~~~~---~~~~~l~i~~~~~~~~~g~y~C 183 (258)
...+.+|+.+.|.|.+.+.+.+.+.|++. +.... ...++.+ ..+..|.|.+++. +|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C 87 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQA-GDEADYYC 87 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCG-GGCEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCCh-hhCEEEEE
Confidence 67788999999999999888999999983 22111 1123322 2234699999997 99999999
Q ss_pred EEEeCCC--CCccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 184 TATNKQG--RSSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 184 ~~~~~~~--~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
.+.+..+ ......+.|.|. .+|.+...+....+..|+.++|.|.+.+..|+ +.|.|+++|..+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 160 (213)
T 3mj8_L 88 QSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQG 160 (213)
T ss_dssp EEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred EeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCC
Confidence 9999876 234566778887 45555554544455589999999999644454 599999999999753
No 273
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.73 E-value=2e-17 Score=119.05 Aligned_cols=130 Identities=18% Similarity=0.318 Sum_probs=92.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--ccc------------CCCcceEEec---CCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQL------------PLNRRQKVFP---NGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~------------~~~~~~~~~~---~~~l~i~~~~~~~~~g~y 181 (258)
+....+.+|+.+.|.|.+.+.+.+.+.|+++. ..+ ....++.+.. ...|.|.++.. +|+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 85 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEA-DDTAIY 85 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCH-HHCeEE
Confidence 44567889999999999998888899999843 221 1122333322 23799999998 999999
Q ss_pred EEEEEeCCCCCccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 182 WCTATNKQGRSSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
+|.+.+..+........|.|.. +|.+...+....+..|+.++|.|.+.+..|. +.|.|+++|+.+..+
T Consensus 86 ~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 157 (210)
T 1lk3_L 86 FCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDG 157 (210)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTT
T ss_pred EEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCC
Confidence 9999987653333445666654 4544443333334579999999999644665 489999999998765
No 274
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.73 E-value=1.5e-17 Score=120.01 Aligned_cols=130 Identities=18% Similarity=0.307 Sum_probs=93.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCc--cc------------CCCcceEEec---CCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ--QL------------PLNRRQKVFP---NGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~--~~------------~~~~~~~~~~---~~~l~i~~~~~~~~~g~y 181 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++. .. ....++.+.. ...|.|.++.. +|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 86 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET-EDFGMY 86 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG-GGCEEE
T ss_pred CccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCCh-hhCEEE
Confidence 445678899999999999998888999998532 11 1112333332 23799999997 999999
Q ss_pred EEEEEeCCCCCccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEecccc
Q psy14532 182 WCTATNKQGRSSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSA 249 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~ 249 (258)
+|.+.+..+........|.|.. +|.+...+.......|+.++|.|.+.+..|.+ .+.|+++|+.+..+
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 158 (213)
T 3d9a_L 87 FCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 158 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred EEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcce
Confidence 9999987654334445666655 45544433333345799999999996446665 89999999998766
No 275
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.73 E-value=2.2e-17 Score=115.51 Aligned_cols=118 Identities=18% Similarity=0.159 Sum_probs=91.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCc-eEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIE-SITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNV 197 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~-~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 197 (258)
+....+.+|+.+.|.|.+.+.+.+ .+.|++++..+.. ..+.|.|.+++. +|+|.|+|.+.+..+ +..+
T Consensus 11 p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~-------~~~~L~i~~v~~-~d~G~Y~C~~~~~~~---s~~~ 79 (176)
T 1f2q_A 11 PPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE-------TNSSLNIVNAKF-EDSGEYKCQHQQVNE---SEPV 79 (176)
T ss_dssp SSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC-------CSSEEEECSCCG-GGCEEEEEECTTSSC---CCCE
T ss_pred CCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC-------CceEEEEeccce-ecCEEEEEEcCCccc---cccE
Confidence 444678999999999999887764 7999999887653 357899999997 999999999987543 4567
Q ss_pred EEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 198 HISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 198 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
.|.|..++.... .....+.+|+.+.|.|.+..+.|.+.+.|+++|..+..
T Consensus 80 ~l~V~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 129 (176)
T 1f2q_A 80 YLEVFSDWLLLQ-ASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKY 129 (176)
T ss_dssp EEEEECSSEEEE-ESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCS
T ss_pred EEEEeCcceeec-CCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEee
Confidence 777774443322 23456789999999999966778889999999998853
No 276
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.73 E-value=1.7e-16 Score=113.93 Aligned_cols=128 Identities=20% Similarity=0.289 Sum_probs=95.3
Q ss_pred CcceecCCcEEEEeeeCcccCceEEEEeCCcccC-------------------CCcceEEecCCeEEEEecccCCCCcEE
Q psy14532 121 NVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP-------------------LNRRQKVFPNGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~-------------------~~~~~~~~~~~~l~i~~~~~~~~~g~y 181 (258)
...+.+|+.+.|.|...+.+.+.+.|++++.... ...+..+..++.|.|.+++. +|+|.|
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~-~D~G~Y 86 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITM-KDMGVY 86 (208)
T ss_dssp SSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCG-GGCEEE
T ss_pred cceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccc-cCCeEE
Confidence 3567899999999998788888999998754221 12244455567899999997 999999
Q ss_pred EEEEEeCCCCCccceEEEEeecCCccccC-CCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccccc
Q psy14532 182 WCTATNKQGRSSSQNVHISVTVPPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
+|.+.+..+...+..+.|.|..++..+.. .....+..|+.+.|.|.+ .+.| +.+.|+++|..+..+..
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~-~~~p-p~i~W~~~g~~l~~~~~ 155 (208)
T 3r4d_A 87 TLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLS-NDIG-ANIQWLFNSQSLQLTER 155 (208)
T ss_dssp EEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEEC-SCTT-CEEEEEETTEECCCCSS
T ss_pred EEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEEC-CCCC-CceEEEECCEeCCCCCC
Confidence 99999986445566777888765432221 112228889999999999 5666 79999999999986543
No 277
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.73 E-value=2.4e-17 Score=117.52 Aligned_cols=122 Identities=20% Similarity=0.271 Sum_probs=88.1
Q ss_pred CcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcc--eEEecCCeEEEEecccCCCCcEEEEEEEeCC-C-CCccce
Q psy14532 121 NVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRR--QKVFPNGTLLIENVQKDHDRGVYWCTATNKQ-G-RSSSQN 196 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~--~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~-~-~~~~~~ 196 (258)
...+.+|+.++|.|.+.+.+. .+.|++++..+..... ......+.|.|.++.. +|+|.|+|.+.|.. + ...+..
T Consensus 13 ~~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~~g~~~~s~~ 90 (198)
T 1ugn_A 13 GSVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITW-EHTGRYRCYYGSDTAGRSESSDP 90 (198)
T ss_dssp CSEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCG-GGCEEEEEEEEETTTEECCCCCC
T ss_pred CCcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCH-HHCeEEEEEEECCCCCcccCCcc
Confidence 357889999999999988765 6999999887642111 1123567899999997 99999999999976 3 234567
Q ss_pred EEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecc
Q psy14532 197 VHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPIL 247 (258)
Q Consensus 197 ~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~ 247 (258)
+.|.|.. +|.+...+ ...+.+|+.++|.|.+. +. .+.|.|+++|..+.
T Consensus 91 ~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~-~~-~~~v~W~k~g~~~~ 141 (198)
T 1ugn_A 91 LELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQ-VA-FDGFILCKEGEDEH 141 (198)
T ss_dssp EEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECS-SC-CSEEEEEEC-----
T ss_pred EEEEEcccccCCccccCC-ccccCCCCcEEEEEecC-CC-CcEEEEEECCCccC
Confidence 7888876 33333333 35688999999999994 55 67999999999874
No 278
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.73 E-value=2.3e-17 Score=118.84 Aligned_cols=125 Identities=21% Similarity=0.270 Sum_probs=93.4
Q ss_pred eecCCcEEEEeeeCcc-cCceEEEEeCCcccCCCcceEEecC---CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEE
Q psy14532 124 AIAGEPLYLGCPVAGY-PIESITWQKGVQQLPLNRRQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHI 199 (258)
Q Consensus 124 ~~~g~~~~l~C~~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 199 (258)
...++.+.|.|.+.+. |.+.+.|++++..+....+..+... ..|.|.++.. +|+|.|+|.+.+..+. ....+.|
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~~~n~~~~-~~~~~~l 91 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTP-NDKGKYVMELFDGKTG-HQKTVDL 91 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCG-GGCEEEEEEEECSSCE-EEEEEEE
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCc-ccCEEEEEEEecCCcc-eEEEEEE
Confidence 3456778888888774 5789999999998877666554333 2499999997 9999999999997663 3344555
Q ss_pred Eeec--------------------CC-ccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccccc
Q psy14532 200 SVTV--------------------PP-KIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAMG 251 (258)
Q Consensus 200 ~v~~--------------------~p-~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~~ 251 (258)
.+.. .| .+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+..+..
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~ 163 (212)
T 2r15_A 92 SGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV-WGDPPPEVSWLKNEKALAQTDH 163 (212)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEE-ECSSCCEEEEEETTEEECCCSS
T ss_pred EEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEE-cCCCCceEEEEECCeECccCCC
Confidence 4431 22 22223444578899999999999 5899999999999999987654
No 279
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.73 E-value=2.5e-17 Score=117.22 Aligned_cols=122 Identities=16% Similarity=0.215 Sum_probs=91.7
Q ss_pred cceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEE--ecCCeEEEEecccCCCCcEEEEEEEeCCC-CCccceEE
Q psy14532 122 VSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKV--FPNGTLLIENVQKDHDRGVYWCTATNKQG-RSSSQNVH 198 (258)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~~~~g~y~C~~~~~~~-~~~~~~~~ 198 (258)
..+.+|+.++|.|.+.+ +.+.+.|++++..+........ ...+.|.|.++.. +|+|.|+|.+.|..+ ...+..+.
T Consensus 14 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~~~~s~~~~ 91 (196)
T 3p2t_A 14 SVISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTE-DYAGRYRCYYRSPVGWSQPSDPLE 91 (196)
T ss_dssp SEEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCG-GGCEEEEEEEEETTEEBCCCCCEE
T ss_pred CcCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCc-ccCceEEEEEeCCCcccCCCccEE
Confidence 37889999999999988 6789999999987754322211 2345799999997 999999999999876 34566777
Q ss_pred EEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 199 ISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 199 l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
|.|.. +|.+...+. ..+.+|+.++|.|.+. + +.+.+.|+++|..+..
T Consensus 92 l~V~~~~~~p~~~~~~~-~~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~ 141 (196)
T 3p2t_A 92 LVMTGAYSKPTLSALPS-PLVTSGKSVTLLCQSR-S-PMDTFLLCKERAAHPL 141 (196)
T ss_dssp EEEECSSCCCEEEEESC-SEECTTCCEEEEEEEE-E-EEEEEEEEETTCCCGG
T ss_pred EEecCCCCCCEEEeCCc-ceecCCCeEEEEEecC-C-CCCEEEEEeCCCcccc
Confidence 88764 333333332 3678999999999994 4 3468999999987754
No 280
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.73 E-value=2e-17 Score=118.27 Aligned_cols=125 Identities=16% Similarity=0.234 Sum_probs=92.5
Q ss_pred CCcceecCCcEEEEeeeCcccC-----ceEEEEe-CCcccCCCcceEEecC------CeEEEEecccCCCCcEEEEEEEe
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPI-----ESITWQK-GVQQLPLNRRQKVFPN------GTLLIENVQKDHDRGVYWCTATN 187 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~-----~~i~W~~-~~~~~~~~~~~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~ 187 (258)
....+.+|+.+.|.|.+.+.|. +.+.|++ ++.......+..+..+ ..|.|.++.. +|+|.|+|.+.+
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~~~ 88 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQV-RDSGQYRCLVIC 88 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCG-GGCEEEEEEEEE
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCH-HHCcEEEEEEEe
Confidence 3567889999999999988775 7999999 5544444444444332 5799999997 999999999999
Q ss_pred CCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 188 KQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 188 ~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
..+. .+..+.|.|..++..+... ...+..|+.+.|.|.+ .+.|.+.+.|++++..+..
T Consensus 89 ~~~~-~~~~~~l~V~~~~~~p~~~-~~~~~~g~~v~l~C~~-~g~P~p~v~W~~~~~~~~~ 146 (202)
T 3bp6_B 89 GAAW-DYKYLTVKVKASYMRIDTR-ILEVPGTGEVQLTCQA-RGYPLAEVSWQNVSVPANT 146 (202)
T ss_dssp TTEE-EEEEEEEEEEBCCCCEEEE-EEECTTTCCEEEEEEE-EEBSCCEEEETTCCSCCEE
T ss_pred CCCc-ceEEEEEEecCCCCcccEE-EEecCCCCeEEEEEEc-cccCCceEEEEeCCCCccC
Confidence 8763 3667778887665322221 1245679999999999 6899999999998876643
No 281
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.72 E-value=5.5e-17 Score=113.34 Aligned_cols=118 Identities=17% Similarity=0.222 Sum_probs=91.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCce-EEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIES-ITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNV 197 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~-i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 197 (258)
+....+.+|+.+.|.|.+.+.|.+. +.|++++..+.. ..+.|.|.++.. +|+|.|+|.+.+... +..+
T Consensus 14 p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-------~~~~L~i~~~~~-~d~G~Y~C~~~n~~~---s~~~ 82 (175)
T 1fnl_A 14 PQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-------QASSYFIDAATV-NDSGEYRCQTNLSTL---SDPV 82 (175)
T ss_dssp SCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES-------SCSEEEESSCCG-GGCEEEEEECSSSCC---CCCE
T ss_pred CCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-------CceEEEEeCCCc-ccCEEEEEEeeCCcc---cccE
Confidence 3445788999999999999887665 899999876542 456899999997 999999999998543 4667
Q ss_pred EEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 198 HISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 198 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
.|.|..++..... ....+.+|+.+.|.|.+..+.|.+.+.|+++|..+..
T Consensus 83 ~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~ 132 (175)
T 1fnl_A 83 QLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY 132 (175)
T ss_dssp EEEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE
T ss_pred EEEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC
Confidence 7788755443322 3356788999999999954455569999999998853
No 282
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.72 E-value=5.8e-17 Score=115.06 Aligned_cols=121 Identities=22% Similarity=0.284 Sum_probs=93.4
Q ss_pred cceecCCcEEEEeeeCcccCc--eEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEE
Q psy14532 122 VSAIAGEPLYLGCPVAGYPIE--SITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHI 199 (258)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~--~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 199 (258)
+.+..|++++|.|.+ +.|.+ .|.|.+.+..+ ...........|.|.+++. +|+|.|.|.+.+..+ .....+.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--~~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~n~~~-~~~~~~~l 91 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL--GAVQSDTGRSVLTVRNASL-SAAGTRVCVGSCGGR-TFQHTVQL 91 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT--CCEEEESSEEEEEECSCCG-GGCEEEEEEEEETTE-EEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc--CcEEecCCccEEEECccCc-ccCceEEEEEEeCCC-ceEEEEEE
Confidence 578899999999999 87777 99999865444 2222223345799999998 999999999999865 35577899
Q ss_pred EeecCCccccCCCCCccCCCCeeeEEEEeccCCCC----ceeEEEECCEecccc
Q psy14532 200 SVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP----LTISWLKNGLPILSA 249 (258)
Q Consensus 200 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~----~~~~W~~~g~~l~~~ 249 (258)
.|..+|....... ..+..|+.+ |.|.+.+.+|. +.|.|++||+.|...
T Consensus 92 tV~~~P~~~~i~~-~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~ 143 (210)
T 1gsm_A 92 LVYAFPNQLTVSP-AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGA 143 (210)
T ss_dssp EEEBCCSEEEEES-SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTC
T ss_pred EEEecCCCcEEcc-ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccc
Confidence 9999887544322 256778888 99999655674 589999999999654
No 283
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.72 E-value=3.1e-17 Score=117.07 Aligned_cols=129 Identities=25% Similarity=0.331 Sum_probs=95.9
Q ss_pred CCCcceecCCcEEEEee-eCcccC-ceEEEEeCCcccCC---CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 119 MGNVSAIAGEPLYLGCP-VAGYPI-ESITWQKGVQQLPL---NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~-~~~~~~-~~i~W~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
.....+.+|+.+.|.|. +.+.|. +.+.|++++..+.. ........++.|.|.++.. +|+|.|+|.+.+..+...
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEA-SDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCG-GGCEEEEEEEEEGGGTEE
T ss_pred CceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCc-ccCeEEEEEEEecCCCcc
Confidence 45677899999999999 788888 99999999877642 2223334567899999997 999999999998654222
Q ss_pred --cceEEEEeec-------CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 194 --SQNVHISVTV-------PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 194 --~~~~~l~v~~-------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
...+.+.+.. +|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~ 157 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFA-LGNPVPDIRWRKVLEPMPST 157 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEE-EEESCCEEEEEETTBCCCTT
T ss_pred hhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEc-cCCCCCceEEEeCCCcCCCc
Confidence 2334443332 2323333335567889999999999 68899999999999988754
No 284
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.72 E-value=1.3e-16 Score=124.87 Aligned_cols=170 Identities=12% Similarity=0.161 Sum_probs=104.7
Q ss_pred eceeee-ecCCCceEEEEEEeec---CC-CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecc
Q psy14532 8 KFIQQT-LQPGPPVSLKCIATGN---PT-PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQ 82 (258)
Q Consensus 8 ~~~~~~-~~~g~~v~l~C~~~~~---~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 82 (258)
.+.... +.+|++++|.|.+.+. |. ..|.|+|++..+.......... +. ........+|.|..+
T Consensus 173 ~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~----------~~-~~~~~~~s~L~I~~~- 240 (376)
T 2aty_A 173 PPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREE----------QF-NSTFRSVSELPIMHQ- 240 (376)
T ss_pred CcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCc----------cc-CCcEEEEEEEEechH-
Confidence 333334 7899999999999886 32 3799999876543221000000 00 011122446899999
Q ss_pred cCCCceEEEEEEEeCCccee-eceEEE--EEecCCeecc-CCCcceecCCcEEEEeeeCcc-c-CceEEEEeCCcccCCC
Q psy14532 83 KDHDRGVYWCTATNKQGRSS-SQNVHI--SVTGAPFVRP-MGNVSAIAGEPLYLGCPVAGY-P-IESITWQKGVQQLPLN 156 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~-~~~~~l--~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~-~-~~~i~W~~~~~~~~~~ 156 (258)
+.+|+|.|+|.+.+..+... ...+.+ .+..+|.+.. ........|+.++|.|.+.+. | ...|+|++++..+...
T Consensus 241 ~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~ 320 (376)
T 2aty_A 241 DWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENY 320 (376)
T ss_pred hccCCCEEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCe
Confidence 99999999999998765332 122222 2333443332 233334458899999999885 4 4589999999876432
Q ss_pred cce--EEecCCe------EEEEecccCCCCcEEEEEEEeCCC
Q psy14532 157 RRQ--KVFPNGT------LLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 157 ~~~--~~~~~~~------l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
... ....+++ |.|..... +|.|.|+|.|.|...
T Consensus 321 ~~~~~~~~~dgty~~~s~L~i~~~~~-~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 321 KNTQPIMNTNESYFVYSKLNVQKSNW-EAGNTFTCSVLHEGL 361 (376)
T ss_pred EeCCceECCCCCEEEEEEEEEcHHHh-CCCCcEEEEEEeCCC
Confidence 211 1123333 55555544 678999999999754
No 285
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.72 E-value=1.7e-18 Score=125.00 Aligned_cols=174 Identities=18% Similarity=0.219 Sum_probs=106.7
Q ss_pred CCcce-eeceeeeecCCCceEEEEEEeecCC---CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEE
Q psy14532 2 HPQLI-YKFIQQTLQPGPPVSLKCIATGNPT---PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 2 ~p~~~-~~~~~~~~~~g~~v~l~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
+|.+. ..|....+.+|++++|.|.+.+.+. +.|.| ++ ..+.... .. .. ...+..+ .....+|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~~-~~~~~~~--~~--~~-----~~~~~g~--~~~~~~L~ 69 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAV--QG--PP-----ERDLCGC--YSVSSVLP 69 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-SS-CSSCCCE--EC--CC-----CCCSTTC--CCEEEECT
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-cC-CCCCCcc--cC--Cc-----eECCCCc--EEEEEEEE
Confidence 56664 4577888899999999999988643 68999 43 3332110 00 00 0000111 01234688
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEE---EecCCeecc--CCCcceecCCcEEEEeeeCcc-cC-ceEEEEeCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHIS---VTGAPFVRP--MGNVSAIAGEPLYLGCPVAGY-PI-ESITWQKGV 150 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~---v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~-~~-~~i~W~~~~ 150 (258)
|.++ +..|+|.|+|.+.+..+... ....+. +..+|.+.. .....+..|+.+.|.|.+.|. |. +.|.|++++
T Consensus 70 I~~~-~~~D~g~Y~C~~~~~~~~~~-~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g 147 (214)
T 1ow0_A 70 GCAE-PWNHGKTFTCTAAYPESKTP-LTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGS 147 (214)
T ss_dssp TTHH-HHHHTCEEEEEECCSSCSSC-EEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETT
T ss_pred EeHH-HcCCCCeEEEEEecCCCCCc-eeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECC
Confidence 8888 88999999999998765432 222332 233443322 222335678899999999884 53 499999999
Q ss_pred cccCCCc----ceEEe---cCCeEEEEe---ccc--CCCCcEEEEEEEeCCC
Q psy14532 151 QQLPLNR----RQKVF---PNGTLLIEN---VQK--DHDRGVYWCTATNKQG 190 (258)
Q Consensus 151 ~~~~~~~----~~~~~---~~~~l~i~~---~~~--~~~~g~y~C~~~~~~~ 190 (258)
..+.... ..... .++++.+.. +.. .++.|.|+|.|.|...
T Consensus 148 ~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 148 QELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp EECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred EECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 8775442 11233 455544432 222 1458999999999754
No 286
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.72 E-value=5e-17 Score=117.19 Aligned_cols=130 Identities=14% Similarity=0.294 Sum_probs=93.1
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCc--cc------------CCCcceEEe---cCCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ--QL------------PLNRRQKVF---PNGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~--~~------------~~~~~~~~~---~~~~l~i~~~~~~~~~g~y 181 (258)
+....+.+|+.+.|.|.+.+.+.+.+.|++... .. ....++.+. ...+|.|.+++. +|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 86 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLES-EDIGSY 86 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCSEE
T ss_pred CCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCc-ccCEEE
Confidence 445678899999999999988888999998431 11 012233322 223799999997 999999
Q ss_pred EEEEEeCCCCCccceEEEEe---ecCCccccCCCCCccCCCCeeeEEEEeccCCC-CceeEEEECCEecccc
Q psy14532 182 WCTATNKQGRSSSQNVHISV---TVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP-PLTISWLKNGLPILSA 249 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v---~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~l~~~ 249 (258)
+|.+.+..+........|.| ..+|.+...+....+..|+.++|.|.+.+++| .+.+.|+++|+.+..+
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 158 (213)
T 3r06_A 87 YCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDG 158 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCc
Confidence 99999875433445566777 44555555444445567889999999964454 4689999999999764
No 287
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.71 E-value=3e-16 Score=116.39 Aligned_cols=175 Identities=19% Similarity=0.298 Sum_probs=99.6
Q ss_pred eceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeeeeC-----CcEE
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVFPN-----GTLL 77 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~l~ 77 (258)
.+..+.+.+|++|+|.|.+.+. ....+.|+|.. ...... ..... +........+..|..+..+ .+|.
T Consensus 29 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 105 (256)
T 3sob_H 29 ESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWV---GWITPYGGYTNYADSVKGRFTISADTSKNTAYLQ 105 (256)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEE---EEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred ecCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEE---EEEecCCCceecCCCCCCcEEEEEeCCCCEEEEE
Confidence 3345778999999999998753 34589999842 111000 00000 0011111222333333322 3499
Q ss_pred EeecccCCCceEEEEEEEeCCc----------ceeeceEEEEEecC----Ceec-cCCCcceecCCcEEEEeeeCc-cc-
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG----------RSSSQNVHISVTGA----PFVR-PMGNVSAIAGEPLYLGCPVAG-YP- 140 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~----------~~~~~~~~l~v~~~----~~~~-~~~~~~~~~g~~~~l~C~~~~-~~- 140 (258)
|.++ +.+|+|.|.|.+.+..+ ........|.|... |.+. ..+...+..|+.+.|.|.+.+ .|
T Consensus 106 I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~ 184 (256)
T 3sob_H 106 MNSL-RAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 184 (256)
T ss_dssp ECSC-CGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSS
T ss_pred ECCC-CcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECC
Confidence 9999 99999999999986431 11224456777532 2222 123334568999999999987 45
Q ss_pred CceEEEEeCCcccCCCcc---eEEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 141 IESITWQKGVQQLPLNRR---QKVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 141 ~~~i~W~~~~~~~~~~~~---~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
...+.| ++..+..... .....+ ..|.|..... +| |.|+|.+.|...
T Consensus 185 ~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d-~~ytC~v~~~~~ 239 (256)
T 3sob_H 185 PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 239 (256)
T ss_dssp CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGT-TT-CCCEEEEEEGGG
T ss_pred CeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHc-CC-ceEEEEEEeCCC
Confidence 457999 5544432110 111122 2577777765 78 999999999754
No 288
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.71 E-value=7.1e-16 Score=110.89 Aligned_cols=203 Identities=16% Similarity=0.263 Sum_probs=132.1
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec-C---CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN-P---TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~-~---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+.+...|....+..|+.++|+|.+.+. | ...++|+|++..+... .+.|.|
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa--------------------------T~tLti 56 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN--------------------------TATLTV 56 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC--------------------------SSEEEE
T ss_pred cEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC--------------------------cceEEe
Confidence 345667888889999999999998763 5 3489999999876543 447888
Q ss_pred eecccCCCceEEEEEEEeCCcceee-ceEEEEEecCCee--ccCCCcceecCCcEEEEeee--Cc-cc-----CceEEEE
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSS-QNVHISVTGAPFV--RPMGNVSAIAGEPLYLGCPV--AG-YP-----IESITWQ 147 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~-~~~~l~v~~~~~~--~~~~~~~~~~g~~~~l~C~~--~~-~~-----~~~i~W~ 147 (258)
..+ ...|+|.|+|.+.+..+.... ..+.+.....+.+ ..+....+..+..+.|.+.+ .| .+ ...+.|+
T Consensus 57 ~s~-t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWy 135 (304)
T 3shs_A 57 ADA-TSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWS 135 (304)
T ss_dssp SSC-CGGGCEEEEEEEEETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEE
T ss_pred eec-cccCCeEEEEEEEECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEe
Confidence 888 899999999999998775431 2222222221111 11233344556788888876 43 33 4599999
Q ss_pred eCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCC-CCccceEEEEeecCCccccCCCCCccCCCCeeeEEE
Q psy14532 148 KGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG-RSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQC 226 (258)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C 226 (258)
+++..+... ..+.+..... .++|.|+|++.+..+ ...+..+.+.+...+.-........+..|+.+.|.-
T Consensus 136 Kngt~IsgA--------q~lT~sS~Ta-teaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~ 206 (304)
T 3shs_A 136 KGEDVIDTT--------QDITIQEFTA-DKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNY 206 (304)
T ss_dssp ETTEEEESS--------SEEEECSCCG-GGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECC
T ss_pred eCCeEccCc--------cccceeeEEe-cCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEE
Confidence 998765422 2445555555 889999999998864 455666666554333222223344567788888775
Q ss_pred Eec-------cCCCC--ceeEEEE
Q psy14532 227 LVT-------KGDPP--LTISWLK 241 (258)
Q Consensus 227 ~~~-------~~~p~--~~~~W~~ 241 (258)
.+. .|.|. ..+.|+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
T 3shs_A 207 VVSEDIVGDSSGMPNLTIKYNWYL 230 (304)
T ss_dssp EEEEECCSCCTTCCEEEEEEEEEE
T ss_pred EEeeccccCCCCCCceEEEEEEEE
Confidence 542 23343 3577873
No 289
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.71 E-value=9.5e-17 Score=103.94 Aligned_cols=97 Identities=21% Similarity=0.243 Sum_probs=77.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+... .++.+. ......+|.|.++
T Consensus 7 pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~---~~~~~~-------------~~~~~~~L~I~~v 70 (114)
T 2cqv_A 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQES---EHMKVE-------------NSENGSKLTILAA 70 (114)
T ss_dssp CCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCS---SSEEEE-------------ECSSEEEEEETTC
T ss_pred CCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCC---CCEEEE-------------EcCCEEEEEECCC
Confidence 788888889999999999999999999999999999998777543 122111 0011457999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCee
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFV 116 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~ 116 (258)
+..|+|.|+|.+.|..+... ..+.|.|...|..
T Consensus 71 -~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~~p~~ 103 (114)
T 2cqv_A 71 -RQEHCGCYTLLVENKLGSRQ-AQVNLTVVDKPDP 103 (114)
T ss_dssp -CTTTCEEEEEEEECSSCEEE-CCEEEEEECSCSC
T ss_pred -ChhcCEEEEEEEEECCCcEE-EEEEEEEECCCCC
Confidence 99999999999999998776 7888999876543
No 290
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.71 E-value=3.5e-16 Score=113.82 Aligned_cols=175 Identities=18% Similarity=0.250 Sum_probs=100.7
Q ss_pred eceeeeecCCCceEEEEEEeec--CCCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeeee-----CCcEE
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
.+..+.+.+|++|+|.|.+.+. ....+.|||.. ...... ..... +........+..|..+.. +.+|.
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (226)
T 3mlr_H 6 ESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWI---GIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQ 82 (226)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEE---EEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEE
T ss_pred cCCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEE---EEEecCCCccccCcccCCcEEEEecCCCCEEEEE
Confidence 3456889999999999998753 34589999842 111000 00000 000011112223333222 23599
Q ss_pred EeecccCCCceEEEEEEEeCCc--------ceeeceEEEEEecC----Ceec-cCCCcceecCCcEEEEeeeCc-cc-Cc
Q psy14532 78 IENVQKDHDRGVYWCTATNKQG--------RSSSQNVHISVTGA----PFVR-PMGNVSAIAGEPLYLGCPVAG-YP-IE 142 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~--------~~~~~~~~l~v~~~----~~~~-~~~~~~~~~g~~~~l~C~~~~-~~-~~ 142 (258)
|.++ +.+|+|.|.|.+.+..+ ........|.|... |.+. ......+..|+.+.|.|.+.+ .| .+
T Consensus 83 I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 161 (226)
T 3mlr_H 83 WTTL-QASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 161 (226)
T ss_dssp ESSC-CGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCC
T ss_pred ECCC-CcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCe
Confidence 9999 99999999999976431 11113345666432 2222 122223457899999999987 44 45
Q ss_pred eEEEEeCCcccCCCc---ceEEecCC------eEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 143 SITWQKGVQQLPLNR---RQKVFPNG------TLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 143 ~i~W~~~~~~~~~~~---~~~~~~~~------~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.+.| ++..+.... ......++ .|.|.+... +| |.|+|.|.|...
T Consensus 162 ~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-~~ytC~v~h~~~ 214 (226)
T 3mlr_H 162 TVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 214 (226)
T ss_dssp EEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGT-TT-CCCEEEEEEGGG
T ss_pred EEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHc-CC-CeEEEEEEECCC
Confidence 8999 444332111 01112222 577777765 77 999999999754
No 291
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.70 E-value=7.6e-17 Score=117.98 Aligned_cols=176 Identities=14% Similarity=0.266 Sum_probs=102.4
Q ss_pred CCcc-eeeceeee-ecCCCceEEEEEEeecC----CCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCc
Q psy14532 2 HPQL-IYKFIQQT-LQPGPPVSLKCIATGNP----TPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGT 75 (258)
Q Consensus 2 ~p~~-~~~~~~~~-~~~g~~v~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (258)
+|.+ +..+.... +..|++++|.|.+.++. ...|.|+|+|..+..... ...... ..........
T Consensus 22 ~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~-~~~~~~----------~~g~~~~~s~ 90 (240)
T 4acp_A 22 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT-KPREEQ----------YNSTYRVVSV 90 (240)
T ss_dssp -CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEE-CCCEEC-------------CEEEEEE
T ss_pred CCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCcee-ccceEC----------CCCeEEEEEE
Confidence 3444 44555555 66799999999999863 337999999988754310 000000 0001111235
Q ss_pred EEEeecccCCCceEEEEEEEeCCcce-eeceEEE--EEecCCeecc-CCCcceecCCcEEEEeeeCc-ccCc-eEEEEeC
Q psy14532 76 LLIENVQKDHDRGVYWCTATNKQGRS-SSQNVHI--SVTGAPFVRP-MGNVSAIAGEPLYLGCPVAG-YPIE-SITWQKG 149 (258)
Q Consensus 76 l~i~~~~~~~d~G~Y~C~~~~~~~~~-~~~~~~l--~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~~~-~i~W~~~ 149 (258)
|.|... ..+|.|.|+|.+.+..+.. ....+.+ .+..+|.+.. ........|+.+.|.|.+.+ +|.+ .+.|+++
T Consensus 91 L~i~~~-~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~ 169 (240)
T 4acp_A 91 LTVLHQ-DWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESN 169 (240)
T ss_dssp EECCHH-HHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EEEech-hccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEEC
Confidence 777767 7778999999999977532 2122222 1223343332 22222334889999999988 5553 8999999
Q ss_pred CcccCCCcc--eEEecCCe------EEEEecccCCCCcEEEEEEEeCCC
Q psy14532 150 VQQLPLNRR--QKVFPNGT------LLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 150 ~~~~~~~~~--~~~~~~~~------l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
+..+..... .....+++ |.+..... .+.+.|+|.|.+..-
T Consensus 170 g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~-~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 170 GQPENNYKATPPVLDSDGSFFLYSKLTVDKSRW-QQGNVFSCSVMHEAL 217 (240)
T ss_dssp TEECSSEEECCCEECTTSCEEEEEEEEEEHHHH-HTTCCEEEEEECTTS
T ss_pred CEECCCcCccCceECCCCCEEEEEEEEEChHHh-CCCCEEEEEEEECCC
Confidence 987643211 11123443 44444433 578999999999753
No 292
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.70 E-value=1.3e-16 Score=114.03 Aligned_cols=131 Identities=13% Similarity=0.122 Sum_probs=92.7
Q ss_pred CCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcce---E-EecCCeEEEEecccCCCCcEEEEEEEeC
Q psy14532 113 APFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQ---K-VFPNGTLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 113 ~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~---~-~~~~~~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
+|.+...+...+.+|++++|.|.+.+ +.+.+.|+|++..+...... . ....+.|.|.+++. +|+|.|+|.+.+.
T Consensus 8 ~P~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~-~D~G~Y~C~a~~~ 85 (201)
T 1nkr_A 8 KPSLLAHPGPLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQ-DLAGTYRCYGSVT 85 (201)
T ss_dssp CCEEEEESCSEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCG-GGCEEEEEEEEBT
T ss_pred CCeEEEEcCCccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCc-ccCeEEEEeEecC
Confidence 44444333466889999999999974 67799999998765422111 0 12345799999997 9999999999865
Q ss_pred C----CCCccceEEEEeecC---CccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 189 Q----GRSSSQNVHISVTVP---PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 189 ~----~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
. ....+..+.|.|... |.+...+. ..+.+|+.++|.|.+. + +.+.|.|+|+|..+..
T Consensus 86 ~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~-~-~~~~~~w~k~g~~~~~ 149 (201)
T 1nkr_A 86 HSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSR-S-SYDMYHLSREGEAHER 149 (201)
T ss_dssp TBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEES-S-CCSEEEEEETTCSSCE
T ss_pred CCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCC-C-CCceEEEEECCcccCc
Confidence 2 123456677777653 44433333 4688999999999994 4 4678999999988764
No 293
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.70 E-value=6.4e-17 Score=116.55 Aligned_cols=130 Identities=18% Similarity=0.335 Sum_probs=90.2
Q ss_pred CCCcceecCCcEEEEeeeCccc---CceEEEEeCC--ccc------------CCCcceEEec---CCeEEEEecccCCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP---IESITWQKGV--QQL------------PLNRRQKVFP---NGTLLIENVQKDHDR 178 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~---~~~i~W~~~~--~~~------------~~~~~~~~~~---~~~l~i~~~~~~~~~ 178 (258)
+....+.+|+.+.|.|.+.+.+ .+.+.|++++ ..+ ....++.... ...|.|.++.. +|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~ 85 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT-EDE 85 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGC
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc-cCC
Confidence 4456788999999999998866 4789999863 221 1122333322 23799999997 999
Q ss_pred cEEEEEEEeCCCCCccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEecccc
Q psy14532 179 GVYWCTATNKQGRSSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSA 249 (258)
Q Consensus 179 g~y~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~ 249 (258)
|.|.|.+.+..+........|.|. .+|.+...+....+..|+.++|.|.+.+.+|++ .|.|+++|+.+..+
T Consensus 86 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 161 (212)
T 1q0x_L 86 AIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAG 161 (212)
T ss_dssp EEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred EEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCC
Confidence 999999998765323344556664 345444433333445799999999996445553 89999999998765
No 294
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.70 E-value=1.8e-16 Score=116.43 Aligned_cols=128 Identities=27% Similarity=0.399 Sum_probs=97.9
Q ss_pred CCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcc----eEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRR----QKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQ 195 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~----~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~ 195 (258)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ........|.|.++.. +|+|.|+|.+.+..+. .+.
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~~~~~~~~-~~~ 100 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVP-SDRGNYTCVVENKFGS-IRQ 100 (241)
T ss_dssp CEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCG-GGCEEEEEEEEETTEE-EEE
T ss_pred cceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCc-ccCEEEEEEEeecCCc-eEE
Confidence 456788999999999999988899999999987754332 2223456799999997 9999999999998763 445
Q ss_pred eEEEEeecCCcc----c-cCCCCCccCCCCeeeEEEEeccCCCCceeEEEE----CCEeccccc
Q psy14532 196 NVHISVTVPPKI----A-PFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLK----NGLPILSAM 250 (258)
Q Consensus 196 ~~~l~v~~~p~~----~-~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~----~g~~l~~~~ 250 (258)
.+.|.|...+.. . ..+....+..|+.+.|.|.+ .+.|.+.+.|++ +|..+....
T Consensus 101 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~-~~~p~p~v~W~~~~~~~g~~~~~~~ 163 (241)
T 3grw_A 101 TYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKV-YSDAQPHIQWLKHVEVNGSKVGPDG 163 (241)
T ss_dssp EEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEE-ECSSCCEEEEEEECCSSSCSSCTTT
T ss_pred EEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEE-ecCCCCEEEEEEcccCCCcccCCCC
Confidence 667777653221 1 12345568889999999999 688889999999 888776543
No 295
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.70 E-value=5.2e-17 Score=117.17 Aligned_cols=125 Identities=12% Similarity=0.106 Sum_probs=89.2
Q ss_pred CCcceecC--CcEEEEeeeCcccCceEEEEeC---CcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 120 GNVSAIAG--EPLYLGCPVAGYPIESITWQKG---VQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 120 ~~~~~~~g--~~~~l~C~~~~~~~~~i~W~~~---~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
..+.+.+| +.+.|.|.+.+ |.+.++|+++ +..+.............|.|.++.. +|+|.|+|.+.+..+...+
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~-~D~G~Y~C~a~n~~~~~~s 92 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMI-SYAGMVFCEAKINDESYQS 92 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGT-TTCSEEEEEEC----CEEC
T ss_pred eEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCCh-hcCceEEEEEEECCeeEEE
Confidence 45678889 99999999986 7789999884 5555555455555677899999997 9999999999985443344
Q ss_pred ceEEEEeec--CCccccCCCCC-ccCCCCeeeEEEEeccCCC--CceeEEEECCEecc
Q psy14532 195 QNVHISVTV--PPKIAPFEFQP-DLHSGDRAGVQCLVTKGDP--PLTISWLKNGLPIL 247 (258)
Q Consensus 195 ~~~~l~v~~--~p~~~~~~~~~-~~~~g~~~~l~C~~~~~~p--~~~~~W~~~g~~l~ 247 (258)
..+.|.|.. +|.+...+... .+.+|+.++|.|.+. +.| .+.+.|+++|+.+.
T Consensus 93 ~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~~~i~W~~~g~~~~ 149 (213)
T 2x1w_L 93 IMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTAR-TELNVGIDFNWEYPSSKHQ 149 (213)
T ss_dssp CCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEE-ECTTBCCEEEEECSCSSCC
T ss_pred EEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEE-CCCCCceEEEEEecCCccc
Confidence 446777644 22233333333 788999999999994 533 46899999988753
No 296
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=1.5e-16 Score=100.42 Aligned_cols=93 Identities=34% Similarity=0.580 Sum_probs=76.1
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+.... .++ ....+++|.|.+
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~--~~~----------------~~~~~~~L~i~~ 68 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRD--PRA----------------TIQEQGTLQIKN 68 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSC--SSC----------------EECTTCCEEEES
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCC--CCE----------------EEcCCCEEEEcc
Confidence 37888888999999999999999999999999999999987765321 111 122456899999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA 113 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~ 113 (258)
+ +..|+|.|+|.+.|..|... ..+.|.|..+
T Consensus 69 v-~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~ 99 (100)
T 2edj_A 69 L-RISDTGTYTCVATSSSGETS-WSAVLDVTES 99 (100)
T ss_dssp C-CTTTCCEEEEEEECSSCCCB-CCEEEEEESC
T ss_pred C-CcccCEEEEEEEEcCCCCEE-EEEEEEEecC
Confidence 9 99999999999999988776 7888888765
No 297
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.70 E-value=1.4e-16 Score=114.78 Aligned_cols=126 Identities=21% Similarity=0.392 Sum_probs=95.9
Q ss_pred CCcceecCCcEEEEeeeCccc----CceEEEEeCC----------------cccC-----CCcceEEec------CCeEE
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP----IESITWQKGV----------------QQLP-----LNRRQKVFP------NGTLL 168 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~----~~~i~W~~~~----------------~~~~-----~~~~~~~~~------~~~l~ 168 (258)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++++ .... ...+..+.. +.+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 346788999999999998766 4699999843 2221 122333322 45799
Q ss_pred EEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEE--CCEec
Q psy14532 169 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLK--NGLPI 246 (258)
Q Consensus 169 i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~--~g~~l 246 (258)
|.+++. +|+|.|+|.+.+..+ ..+..+.|.|..+|.+...+....+..|+.+.|.|.+..+.|.+.+.|++ ++..+
T Consensus 88 i~~v~~-~D~G~Y~C~~~~~~~-~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~ 165 (214)
T 3jz7_A 88 VTNLQL-SDIGTYQCKVKKAPG-VANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTM 165 (214)
T ss_dssp ECSCCG-GGCEEEEEEEEETTE-EEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCC
T ss_pred EccCCh-hhCeEEEEEEEeCCC-ccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCcc
Confidence 999997 999999999999876 34677889999888876655555688999999999996689999999999 44444
Q ss_pred c
Q psy14532 247 L 247 (258)
Q Consensus 247 ~ 247 (258)
.
T Consensus 166 ~ 166 (214)
T 3jz7_A 166 P 166 (214)
T ss_dssp C
T ss_pred C
Confidence 4
No 298
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.70 E-value=3.1e-16 Score=108.94 Aligned_cols=117 Identities=19% Similarity=0.338 Sum_probs=92.3
Q ss_pred CCcceecCCcEEEEeeeCccc-CceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEE
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP-IESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVH 198 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~-~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 198 (258)
....+.+|+.+.|.|.+.+.| .+.+.|++++..+... ...+.+.++.. +|+|.|+|.+.+.. .+..+.
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~-------~~~~~~~~~~~-~d~G~Y~C~~~~~~---~s~~~~ 80 (170)
T 3ry4_A 12 PWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH-------TQPSYRFKANN-NDSGEYTCQTGQTS---LSDPVH 80 (170)
T ss_dssp CCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC-------CSSEEEEECCG-GGCEEEEEEETTSB---CCCCEE
T ss_pred CCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC-------ccceEEEeccc-ccCeEEEEEEeCCC---ceEeEE
Confidence 345688999999999998876 6799999999877543 34567778887 99999999999753 345677
Q ss_pred EEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 199 ISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 199 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
|.|..++.+...+ ...+.+|+.+.|.|.+..+.|.+.+.|+++|..+..
T Consensus 81 l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 129 (170)
T 3ry4_A 81 LTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF 129 (170)
T ss_dssp EEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE
T ss_pred EEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEccc
Confidence 8887766443333 456788999999999966778899999999998764
No 299
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=1.6e-15 Score=110.24 Aligned_cols=177 Identities=15% Similarity=0.235 Sum_probs=106.5
Q ss_pred cceeeceeeeecCCCceEEEEEEeecC--CCeEEEeeCC--EeCcCCccccceecccceeeccccccceeee-----eCC
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNP--TPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVF-----PNG 74 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~--~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 74 (258)
.+.+.+..+.+.+|++++|.|.+.+.+ ...+.|+|.. ..+.. ...........+..|..+. .+.
T Consensus 3 ~v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~-------l~~~~~~~~~~~~~R~~~~~~~~~~~~ 75 (229)
T 1hxm_A 3 ELVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTF-------IYREKDIYGPGFKDNFQGDIDIAKNLA 75 (229)
T ss_dssp CEEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEE-------EEETTTEECTTTTTTEEEEEEGGGTEE
T ss_pred ccEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEE-------EEEcCCccCCCcCCeEEEEEcCCCCEE
Confidence 355667888999999999999988543 4579999852 21110 0000000111122233222 124
Q ss_pred cEEEeecccCCCceEEEEEEEeCC------cc-eeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCc-ccCc-eEE
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQ------GR-SSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAG-YPIE-SIT 145 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~------~~-~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-~i~ 145 (258)
+|.|.++ +.+|+|.|.|.+.+.. .. .......|.|.........+.+.+.. ..+.|.|.+.+ +|.+ .+.
T Consensus 76 sL~I~~v-~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~~-~~~~L~C~~~g~~P~~i~v~ 153 (229)
T 1hxm_A 76 VLKILAP-SERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMK-NGTNVACLVKEFYPKDIRIN 153 (229)
T ss_dssp EEEESSC-CGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEEE-ETTEEEEEEESCBSSCCEEE
T ss_pred EEEECcC-CHhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEcC-CCCeEEEEEEEEeCCCEEEE
Confidence 7999999 9999999999998753 11 12234577776532111122222222 23589999987 4554 899
Q ss_pred EEeCCcccCCCc-ceEEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 146 WQKGVQQLPLNR-RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 146 W~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
|.++ ..+.... ......++++.+......++.+.|+|.|.+...
T Consensus 154 W~~~-~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~~ 198 (229)
T 1hxm_A 154 LVSS-KKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDNK 198 (229)
T ss_dssp EECS-SEEEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETTE
T ss_pred EecC-CEEecCccceEECCCCcEEEEECcccCCCCcEEEEEEeCCC
Confidence 9998 6554322 222345677777654432688999999999753
No 300
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.70 E-value=1e-16 Score=114.48 Aligned_cols=127 Identities=20% Similarity=0.319 Sum_probs=91.3
Q ss_pred CcceecCCcEEEEeeeC----cccCceEEEEeCCcccCC------------CcceE--EecCCeEEEEecccCCCCcEEE
Q psy14532 121 NVSAIAGEPLYLGCPVA----GYPIESITWQKGVQQLPL------------NRRQK--VFPNGTLLIENVQKDHDRGVYW 182 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~----~~~~~~i~W~~~~~~~~~------------~~~~~--~~~~~~l~i~~~~~~~~~g~y~ 182 (258)
.+.+..|+.+.|.|.+. +.+.+.+.|++++..+.. ..+.. ...+.+|.|.+++. +|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~-~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRP-SDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCG-GGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccc-hhCeEEE
Confidence 35678999999999985 346779999998876520 11222 12356899999997 9999999
Q ss_pred EEEEeCCCCCc----cceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 183 CTATNKQGRSS----SQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 183 C~~~~~~~~~~----~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
|.+.+..+... ...+.|.|..++..+... ......|+.+.|.|.+..+.|.+.|.|+++|+.+...
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~-~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~ 151 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSIS-DFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAI 151 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEE-EEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCS
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceE-eccCCCCCeEEEEEecCCccCCCEEEEEECCEECccc
Confidence 99999765433 346677776653221111 1112458899999999668999999999999998754
No 301
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.69 E-value=1.9e-16 Score=112.39 Aligned_cols=129 Identities=17% Similarity=0.225 Sum_probs=90.6
Q ss_pred CCcceecCCcEEEEeeeCc-ccCceEEEEeCCcccC---C---------------CcceEEecCCeEEEEecccCCCCcE
Q psy14532 120 GNVSAIAGEPLYLGCPVAG-YPIESITWQKGVQQLP---L---------------NRRQKVFPNGTLLIENVQKDHDRGV 180 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~-~~~~~i~W~~~~~~~~---~---------------~~~~~~~~~~~l~i~~~~~~~~~g~ 180 (258)
..+.+.+|++++|.|.+.+ .+.+.+.|++++..+. . ..+..+..+++|.|.+++. +|+|.
T Consensus 6 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~-~D~G~ 84 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKM-EDTGS 84 (193)
T ss_dssp EEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCG-GGCEE
T ss_pred eEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCc-ccCce
Confidence 3466789999999999875 4456999999865331 0 0133444577899999998 99999
Q ss_pred EEEEEEeCCCCCccceEEEEeecCCccccCCCC-CccCCCC-eeeEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 181 YWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQ-PDLHSGD-RAGVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 181 y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~-~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
|+|.+.+..+. ....+.|.|..++..+..... .....|. .++|.|.+.++.|.+.|.|+++|+.+..+.
T Consensus 85 Y~C~~~~~~~~-~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~ 155 (193)
T 2if7_A 85 YRAQISTKTSA-KLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQP 155 (193)
T ss_dssp EEEEEECSSCE-EEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSS
T ss_pred EEEEEEecCCC-eEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCC
Confidence 99999988763 335677888765533222111 1223455 899999996446789999999998876543
No 302
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.69 E-value=1.8e-16 Score=115.52 Aligned_cols=127 Identities=22% Similarity=0.401 Sum_probs=97.5
Q ss_pred CCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcc----eEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRR----QKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQ 195 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~----~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~ 195 (258)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ........|.|.++.. +|+|.|+|.+.+..+. ...
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~n~~~~-~~~ 104 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVP-SDKGNYTCVVENEYGS-INH 104 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCG-GGCEEEEEEEEETTEE-EEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCc-ccCEEEEEEEecccCc-ccc
Confidence 456788999999999999989899999999987754432 2223445799999997 9999999999998763 456
Q ss_pred eEEEEeecCCccc-----cCCCCCccCCCCeeeEEEEeccCCCCceeEEEE----CCEecccc
Q psy14532 196 NVHISVTVPPKIA-----PFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLK----NGLPILSA 249 (258)
Q Consensus 196 ~~~l~v~~~p~~~-----~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~----~g~~l~~~ 249 (258)
.+.|.|...+... ..+....+..|+.+.|.|.+ .+.|.+.+.|++ +|..+..+
T Consensus 105 ~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~g~~~~~~ 166 (231)
T 3ojm_B 105 TYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKV-YSDAQPHIQWIKHVEKNGSKYGPD 166 (231)
T ss_dssp EEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCE-ECSSCCEEEEEEECCBTTBSBCTT
T ss_pred cEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEE-ecCCCCEEEEEECCCCCCccccCC
Confidence 6677776543321 12344567889999999999 588889999999 77776543
No 303
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.69 E-value=6.5e-16 Score=117.41 Aligned_cols=154 Identities=21% Similarity=0.238 Sum_probs=104.4
Q ss_pred eeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee-cccCCCce
Q psy14532 10 IQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN-VQKDHDRG 88 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~d~G 88 (258)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.+. ......+|.|.+ + ...|.|
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---~~~~~~-------------~~~~~~~l~i~~~~-~~~d~G 174 (305)
T 2nzi_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN---GHYQVI-------------VTRSFTSLVFPNGV-ERKDAG 174 (305)
T ss_dssp CCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSS---SSCEEE-------------ECSSEEEEEETTCC-CSTTCE
T ss_pred ccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCC---CcEEEE-------------EcCCceEEEEecCC-ccCccE
Confidence 4566889999999999999999999999998776543 111111 001235788999 9 999999
Q ss_pred EEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeee--------------CcccCceEEEEeCCcccC
Q psy14532 89 VYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPV--------------AGYPIESITWQKGVQQLP 154 (258)
Q Consensus 89 ~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~--------------~~~~~~~i~W~~~~~~~~ 154 (258)
.|+|.+.|..|... ..+.|.|...|............+..+.|.|.. ...+.+...|.+.+.
T Consensus 175 ~Y~C~a~N~~G~~~-~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~--- 250 (305)
T 2nzi_A 175 FYVVCAKNRFGIDQ-KTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQ--- 250 (305)
T ss_dssp EEEEEEEETTEEEE-EEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEE---
T ss_pred EEEEEEEeCCCcee-eEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECcc---
Confidence 99999999998876 778888876653221111112244566666654 222222233332211
Q ss_pred CCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 155 LNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 155 ~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
.....+.|.++.. .+.|.|+|.|.|..|..
T Consensus 251 -------~~~~~~~i~~l~~-~~~y~~~~~A~N~~G~~ 280 (305)
T 2nzi_A 251 -------ARETRYTVINLFG-KTSYQFRVIAENKFGLS 280 (305)
T ss_dssp -------ESSSEEEECSCCS-SCEEEEEEEEEETTEEC
T ss_pred -------ccCceEEecCCCC-CCeEEEEEEEEeCCccc
Confidence 1256788999987 89999999999998643
No 304
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.69 E-value=2.2e-16 Score=99.69 Aligned_cols=93 Identities=26% Similarity=0.472 Sum_probs=74.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeC--CcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPN--GTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~ 79 (258)
||.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+........ ....+ .+|.|.
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~-----------------~~~~~~~~~L~i~ 67 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKM-----------------IVSEKGLHSLIFE 67 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCE-----------------EEETTTEEEEEES
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEE-----------------EEcCCCeEEEEEC
Confidence 68888888899999999999999999999999999999987765421110 01112 379999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEecC
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA 113 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~ 113 (258)
++ +..|+|.|+|.+.|..|... ..+.|.|...
T Consensus 68 ~v-~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~ 99 (100)
T 2kdg_A 68 VV-RASDAGAYACVAKNRAGEAT-FTVQLDVLAK 99 (100)
T ss_dssp SC-CGGGCEEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred CC-CcccCEEEEEEEEcCCCeEE-EEEEEEEEec
Confidence 99 99999999999999998766 7888888754
No 305
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.69 E-value=1.3e-16 Score=114.85 Aligned_cols=125 Identities=17% Similarity=0.357 Sum_probs=90.5
Q ss_pred CcceecCCcEEEEeeeCcccCceEEEEeC--CcccC------------CCcceEE---ecCCeEEEEecccCCCCcEEEE
Q psy14532 121 NVSAIAGEPLYLGCPVAGYPIESITWQKG--VQQLP------------LNRRQKV---FPNGTLLIENVQKDHDRGVYWC 183 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~i~W~~~--~~~~~------------~~~~~~~---~~~~~l~i~~~~~~~~~g~y~C 183 (258)
...+.+|+.+.|.|.+. +.+.+.|+++ +.... ...++.+ ..+.+|.|.+++. +|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C 85 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQT-DDEAVYYC 85 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCG-GGCEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCCh-hHCEEEEE
Confidence 56788999999999998 8889999994 22211 1123322 1234699999997 99999999
Q ss_pred EEEeCCC-CCccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCC-CceeEEEECCEeccc
Q psy14532 184 TATNKQG-RSSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP-PLTISWLKNGLPILS 248 (258)
Q Consensus 184 ~~~~~~~-~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~l~~ 248 (258)
.+.+..+ ........|.|. .+|.+...+....+..|+.++|.|.+.+..| .+.+.|+++|+.+..
T Consensus 86 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 156 (211)
T 3tv3_L 86 GSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA 156 (211)
T ss_dssp EEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCC
Confidence 9999766 234456677777 4555554444444457999999999964443 689999999999865
No 306
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.69 E-value=2.2e-16 Score=99.54 Aligned_cols=94 Identities=19% Similarity=0.297 Sum_probs=74.3
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.... +..+. .......+|.|.++
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~---~~~~~------------~~~~~~~~L~i~~v 69 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSD---RIYWY------------WPEDNVCELVIRDV 69 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS---SEEEE------------EEETTEEEEEECSC
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCC---CEEEE------------EcCCCEEEEEECCC
Confidence 6888888999999999999999999999999999999998876541 11110 00011336999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEec
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
+.+|+|.|+|.+.|..|... ..+.|.|..
T Consensus 70 -~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~ 98 (99)
T 1g1c_A 70 -TGEDSASIMVKAINIAGETS-SHAFLLVQA 98 (99)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEEC
T ss_pred -CcCCCEEEEEEEEECCCcEE-EEEEEEEec
Confidence 99999999999999988776 677777764
No 307
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.69 E-value=1.9e-16 Score=111.64 Aligned_cols=113 Identities=22% Similarity=0.387 Sum_probs=80.9
Q ss_pred ceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEe-cccCCCCcEEEEEEEeCCCCCccceEEEEe
Q psy14532 123 SAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIEN-VQKDHDRGVYWCTATNKQGRSSSQNVHISV 201 (258)
Q Consensus 123 ~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v 201 (258)
....|+.+.|.|.+.+ +. .+.|++++..+... .+++|.|.+ +.. +|+|.|+|.|.|..+. .+..+.+.|
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~------~~~~L~I~~~~~~-~D~G~Y~C~a~n~~g~-~~~~~~~~v 79 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK------HDKHLVLQDFSEV-EDSGYYVCYTPASNKN-TYLYLKARV 79 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC------CCSEEEEESCCTT-TSCEEEEEECSSCCCC-CCEEECCCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC------CCCEEEECCCCcc-ccCEEEEEEEEeCCCc-EEEEEEEEE
Confidence 4568999999999987 43 49999999887643 346799999 887 9999999999998774 333333333
Q ss_pred ec--CCc----------------cccCCC----C---CccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 202 TV--PPK----------------IAPFEF----Q---PDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 202 ~~--~p~----------------~~~~~~----~---~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
.. ++. +..... . ..+..|+.+.|.|.+ |.+.|.|++||+.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~----p~p~i~W~k~g~~i~~~ 148 (186)
T 1jbj_A 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL----TDKTIKWLKDGSIISPL 148 (186)
T ss_dssp CSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS----SCSCEEEEETTEECCCS
T ss_pred ecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC----CCCeEEEEECCEECccc
Confidence 22 111 000000 0 134489999999998 67899999999998743
No 308
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.68 E-value=5.5e-17 Score=121.33 Aligned_cols=160 Identities=19% Similarity=0.265 Sum_probs=88.1
Q ss_pred cCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccC------
Q psy14532 83 KDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLP------ 154 (258)
Q Consensus 83 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~------ 154 (258)
++.|.+.|.|.+.+..+... ....+.|. ..+..+.+.+|+.++|.|.+.+ +.+.+.|++.. ....
T Consensus 4 ~~~~~~~y~~~~~~~~g~~~-~~~~~~v~-----~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~ 76 (270)
T 3qib_D 4 ERADLIAYLKQATKGGGGSG-GGGGMKVI-----QTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQ 76 (270)
T ss_dssp -------------------------CCCE-----EECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEE
T ss_pred hhhhHHHHHHHHhccCCccc-cccceeEE-----eCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEEC
Confidence 56799999999988765443 22222222 2234567889999999999865 66799999832 1110
Q ss_pred C------C---c-ceEEec----CCeEEEEecccCCCCcEEEEEEEeCCC---CCccceEEEEeec------CCccccC-
Q psy14532 155 L------N---R-RQKVFP----NGTLLIENVQKDHDRGVYWCTATNKQG---RSSSQNVHISVTV------PPKIAPF- 210 (258)
Q Consensus 155 ~------~---~-~~~~~~----~~~l~i~~~~~~~~~g~y~C~~~~~~~---~~~~~~~~l~v~~------~p~~~~~- 210 (258)
. . . ++.+.. +.+|.|.+++. +|+|.|.|.+.+... ........|.|.. +|.+...
T Consensus 77 ~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~ 155 (270)
T 3qib_D 77 NQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEA-GDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFE 155 (270)
T ss_dssp TTEEEEECHHHHHHEEEECCTTSCEEEEESSCCG-GGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEE
T ss_pred CCCceecCCccCCcEEEEeCCCcEEEEEECCCCH-hHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEEC
Confidence 0 0 0 333322 34799999998 999999999986431 1123445666665 3333322
Q ss_pred CCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEeccccc
Q psy14532 211 EFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSAM 250 (258)
Q Consensus 211 ~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~~ 250 (258)
+....+..|+.++|.|.+.+..|.+ .+.|+++|+.+..+.
T Consensus 156 ~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~ 196 (270)
T 3qib_D 156 PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV 196 (270)
T ss_dssp CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred CCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCc
Confidence 2222345599999999996547766 899999999997643
No 309
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.68 E-value=2.1e-18 Score=133.66 Aligned_cols=154 Identities=20% Similarity=0.287 Sum_probs=110.9
Q ss_pred CceEEEEEEEeCCcceeeceEEEEEecCCee-ccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc-ceEEec
Q psy14532 86 DRGVYWCTATNKQGRSSSQNVHISVTGAPFV-RPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR-RQKVFP 163 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~-~~~~~~ 163 (258)
+.|.|+|.+.+... .+.+.+..+|.+ ..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ......
T Consensus 136 ~~~~~~C~~~~~l~-----~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 210 (347)
T 2ifg_A 136 PEQKLQCHGQGPLA-----HMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLP 210 (347)
T ss_dssp GGGCCCCSSSSCSS-----CCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSS
T ss_pred cccCCCCCCChHHh-----cCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecc
Confidence 56889998765221 111122223332 23456678899999999999999999999999887643221 112234
Q ss_pred CCeEEEEecccCCCCc-EEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEEC
Q psy14532 164 NGTLLIENVQKDHDRG-VYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKN 242 (258)
Q Consensus 164 ~~~l~i~~~~~~~~~g-~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 242 (258)
.+.|.|.++.. +|+| .|+|.+.+..+. .+..+.|.|..+|.+ .......|+.+.|.|.+ .|.|.+.|.|+++
T Consensus 211 ~~~L~i~~v~~-~D~G~~Y~C~a~n~~g~-~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~-~g~P~p~i~W~~~ 283 (347)
T 2ifg_A 211 SLGLTLANVTS-DLNRKNVTCWAENDVGR-AEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSV-DGQPAPSLRWLFN 283 (347)
T ss_dssp EEEEEEESCCS-TTTTCCEEECCEETTEE-CCEEECCCCBEEEEE----EECCCEESSSEEEEEEE-EEESCCEEEEEET
T ss_pred cceEEEeeCCh-HHCCCeEEEEEEcCCCC-EEEEEEEEEcCCCee----eeccCccCceEEEEEEe-eecCCCcEEEEeC
Confidence 56799999997 9999 999999998774 356667777777764 12234578999999999 5889999999999
Q ss_pred CEecccccc
Q psy14532 243 GLPILSAMG 251 (258)
Q Consensus 243 g~~l~~~~~ 251 (258)
|+.+..+..
T Consensus 284 g~~l~~~~~ 292 (347)
T 2ifg_A 284 GSVLNETSF 292 (347)
T ss_dssp TEECCCCSS
T ss_pred CEECCCCcc
Confidence 999986543
No 310
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.68 E-value=5.9e-16 Score=100.38 Aligned_cols=98 Identities=28% Similarity=0.441 Sum_probs=76.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.... .++.+... .....+|.|.++
T Consensus 15 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~--~~~~~~~~------------~~~~~~L~I~~v 80 (116)
T 2kkq_A 15 APMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNT--DRISLYQD------------NTGRVTLLIKDV 80 (116)
T ss_dssp CCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCB--TTEEEEEC------------TTCEEEEEEEEE
T ss_pred CCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCC--CeEEEEeC------------CCCeEEEEECCC
Confidence 6889999999999999999999999999999999999998776431 11111100 000127999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
+..|+|.|+|.+.|..|... ..+.|.|..+|.
T Consensus 81 -~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~~p~ 112 (116)
T 2kkq_A 81 -NKKDAGWYTVSAVNEAGVTT-CNTRLDVTARPN 112 (116)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEECCSC
T ss_pred -CcccCEEEEEEEEcCCCeEE-EEEEEEEeCCCC
Confidence 99999999999999988776 788888887654
No 311
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.68 E-value=8.5e-16 Score=130.24 Aligned_cols=186 Identities=18% Similarity=0.236 Sum_probs=123.6
Q ss_pred cCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCC-ceEEEEE
Q psy14532 15 QPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHD-RGVYWCT 93 (258)
Q Consensus 15 ~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d-~G~Y~C~ 93 (258)
..+.++.|.|.+.|.|.+.+.|.++|..+... ..+.+.|..+ ...+ ++.|.|.
T Consensus 89 ~~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~-------------------------~~~~~~i~~~-~~~~~~l~~~~v 142 (731)
T 2v5y_A 89 SPPGLLNVYVKVNNGPLGNPIWNISGDPTRTW-------------------------NRAELAISTF-WPNFYQVIFEVI 142 (731)
T ss_dssp SCSEEEEEEEEETTCCCCSEEEEECCCCCSSC-------------------------EEEEEEECCC-TTSCEEEEEEEE
T ss_pred CCcceEEEEEecCCCCccceeEEEeCCcCCce-------------------------eEEEEEEeec-CCCceEEEEEEE
Confidence 44568999999999999999999998765332 0112333332 2222 3666776
Q ss_pred EEeCCcceeeceEEEEEe---cCCeeccCCCcceecCCcEEEEeeeCcccCceEE-EE--eCCcccCCCcceEEec---C
Q psy14532 94 ATNKQGRSSSQNVHISVT---GAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESIT-WQ--KGVQQLPLNRRQKVFP---N 164 (258)
Q Consensus 94 ~~~~~~~~~~~~~~l~v~---~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~-W~--~~~~~~~~~~~~~~~~---~ 164 (258)
+.+..|......+.+.+. .+|.+..+....+..|+.+.|.|.+.|.|.+.+. |+ +++..+.......+.. .
T Consensus 143 a~~~~G~~~~~~v~~~~~~~~~~p~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~ 222 (731)
T 2v5y_A 143 TSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFI 222 (731)
T ss_dssp ECSSCCEEEECCBEEESSCCSSSCEECCCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEE
T ss_pred ecCCceEEEEeeEEeeecccccccccccccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccce
Confidence 555555433233333322 3444445566788999999999999999988887 87 5676654332222211 2
Q ss_pred CeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEe
Q psy14532 165 GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLV 228 (258)
Q Consensus 165 ~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~ 228 (258)
+.|.|.++.. .|.|.|+|.|.|..|...+....|.|..+|.....+.... .....+.|.|..
T Consensus 223 ~~l~I~~~~~-~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~-~~~~~v~l~w~~ 284 (731)
T 2v5y_A 223 ASFNVVNTTK-RDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLAS-VGATYLWIQLNA 284 (731)
T ss_dssp EEEEECSCCT-TTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEE-ECSSCEEEECCC
T ss_pred EEEEEccccc-ccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcceec-cCCceEEEEeCC
Confidence 5799999997 9999999999999885466677888888877554443222 235678888876
No 312
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=2.3e-16 Score=102.73 Aligned_cols=94 Identities=30% Similarity=0.477 Sum_probs=76.7
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+.... .+ .....+++|.|.+
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~--~~----------------~~~~~~~~L~i~~ 68 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQD--SR----------------IKQLENGVLQIRY 68 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTS--TT----------------EEEEETTEEEEES
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCC--Ce----------------EEEccCCEEEEcc
Confidence 37888888999999999999999999999999999999987765321 11 1223467899999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
+ +.+|+|.|+|.+.|..|... ..+.|.|...+
T Consensus 69 v-~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~ 100 (118)
T 2eo9_A 69 A-KLGDTGRYTCIASTPSGEAT-WSAYIEVQEFG 100 (118)
T ss_dssp C-CGGGCCCEEEEEECSSCEEE-EECCEEEECCS
T ss_pred C-CcCCCEEEEEEEEcCCCcEE-EEEEEEEEeCC
Confidence 9 99999999999999988765 67778887664
No 313
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=5.6e-16 Score=109.03 Aligned_cols=110 Identities=18% Similarity=0.362 Sum_probs=85.5
Q ss_pred cceecCCcEEEEeeeCcccCc--eEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEE
Q psy14532 122 VSAIAGEPLYLGCPVAGYPIE--SITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHI 199 (258)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~--~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 199 (258)
..+.+|+.+.|.|.+.+.+.+ .+.|++++..+....... ....|.|. .. +|+|.|+|.+.+. ....+.|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~--~~~~l~i~--~~-~d~G~Y~C~~~n~----~~~~~~l 78 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG--QKTEFKVD--SD-DQWGEYSCVFLPE----PMGTANI 78 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC--SEEEEEEC--GG-GCCEEEEEEEEST----TSCEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC--CcEEEEEe--ch-hhCeEEEEEEECC----cCcEEEE
Confidence 456789999999999877666 999999988765443211 12234444 44 8999999999982 3367788
Q ss_pred EeecCCccccCCCCCccCCCCeeeEEEEeccCCC-CceeEEEE
Q psy14532 200 SVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP-PLTISWLK 241 (258)
Q Consensus 200 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~ 241 (258)
.|..+|.+...+....+..|+.+.|.|.+ .+.| .+.+.|++
T Consensus 79 ~V~~~P~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~i~W~~ 120 (184)
T 3b5h_A 79 QLHGPPRVKAVKSSEHINEGETAMLVCKS-ESVPPVTDWAWYK 120 (184)
T ss_dssp EECCSCCCEESCSEEEECTTSCEEEEEEC-CCSSCCCEEEEEE
T ss_pred EEecCCceeecCCCcEEcCCCcEEEEEEE-CCCCCCCeEEEEE
Confidence 89898988777666678899999999999 5777 79999999
No 314
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.68 E-value=1.5e-16 Score=116.53 Aligned_cols=130 Identities=17% Similarity=0.275 Sum_probs=91.6
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCc--cc------------CCCcceEEe---cCCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ--QL------------PLNRRQKVF---PNGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~--~~------------~~~~~~~~~---~~~~l~i~~~~~~~~~g~y 181 (258)
+....+.+|+.+.|.|.+.+.+.+.+.|+++.. .. ....++... .+.+|.|.+++. +|+|.|
T Consensus 31 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 109 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP-EDFATY 109 (237)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh-hhCeEE
Confidence 445678899999999999888888999998431 11 112233332 234699999997 999999
Q ss_pred EEEEEeCCCCCccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCC-CceeEEEECCEecccc
Q psy14532 182 WCTATNKQGRSSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDP-PLTISWLKNGLPILSA 249 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~l~~~ 249 (258)
+|.+.+..+........|.|.. +|.+...+....+..|+.++|.|.+.++.| .+.+.|+++|..+..+
T Consensus 110 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~ 181 (237)
T 3sob_L 110 YCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 181 (237)
T ss_dssp EEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred EEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCc
Confidence 9999886643334445566643 444433333334456889999999965566 6899999999998753
No 315
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.68 E-value=5.4e-16 Score=96.09 Aligned_cols=86 Identities=29% Similarity=0.612 Sum_probs=73.0
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
++++|...|....+.+|+++.|.|.+.+.|.+.+.|+|++..+... ..++|.|.+
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-------------------------~~~~L~i~~ 56 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-------------------------TKKLYMVPY 56 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC-------------------------CSSEEEESS
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC-------------------------CCCeEEECC
Confidence 3678888898999999999999999999999999999998876544 134799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEec
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
+ +..|+|.|+|.+.|..+...+..+.|.|..
T Consensus 57 v-~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 57 V-DLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp C-CGGGCEEEEEEEECSSCEEECCCEEEEEC-
T ss_pred C-CHHhCEEEEEEEEcCCCCEEeeeEEEEEeh
Confidence 9 999999999999999887665777787754
No 316
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.68 E-value=8.4e-16 Score=118.51 Aligned_cols=189 Identities=18% Similarity=0.275 Sum_probs=108.9
Q ss_pred eceeeeecCCCceEEEEEEeecC--------------CCeEEEeeC--CE--eCcCCccccceecccceeecccccc---
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGNP--------------TPHISWKLD--GY--PLAGDRHENKNRIGEARVQQLPLNR--- 66 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~~--------------~~~v~W~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~--- 66 (258)
.+..+.+.+|++++|.|.....+ ...+.||+. ++ .+..+...........+.....+..
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 44567789999999999986432 347999973 32 1211110000000000000000000
Q ss_pred c---eeeeeCCcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCC-Ccc-eecCC-cEEEEeeeCc-c
Q psy14532 67 R---QKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMG-NVS-AIAGE-PLYLGCPVAG-Y 139 (258)
Q Consensus 67 ~---~~~~~~~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~-~~~-~~~g~-~~~l~C~~~~-~ 139 (258)
. .....+++|.|.++ +..|+|.|+|.+.+..+... ..+.|.|..+|.+.... ... +..|+ .++|.|.+.+ +
T Consensus 244 ~~~~g~~~g~~sL~I~~v-~~~D~G~Y~C~v~~~~~~~~-~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~Gfy 321 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRV-QPFQEGTYLATIHLPYLQGQ-VTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFY 321 (401)
T ss_dssp CCSSCCEEEEEEEEETTC-CGGGCEEEEEEEEETTEEEE-EEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEB
T ss_pred cccccccCCcEEEEECcC-CHhhCceEEEEEEeccccee-EEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCc
Confidence 0 02335678999999 99999999999998766555 67788888877654422 222 34676 7999999988 4
Q ss_pred cC--ceEEEE-eCCc---ccCCC-----cceEEecCCeEEEEe------cccCCCCcEEEEEEEeCCCCCccceEE
Q psy14532 140 PI--ESITWQ-KGVQ---QLPLN-----RRQKVFPNGTLLIEN------VQKDHDRGVYWCTATNKQGRSSSQNVH 198 (258)
Q Consensus 140 ~~--~~i~W~-~~~~---~~~~~-----~~~~~~~~~~l~i~~------~~~~~~~g~y~C~~~~~~~~~~~~~~~ 198 (258)
|. +.+.|. +++. ..... .......++++.+.. ...+++.+.|+|.+.|..-....+...
T Consensus 322 P~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL~~g~rs~s 397 (401)
T 3f8u_B 322 PSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRSAE 397 (401)
T ss_dssp SSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTSCTTCEEEE
T ss_pred CCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCCCCCcceEE
Confidence 65 799995 7652 11111 112223455544432 211124569999999986433333333
No 317
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.67 E-value=5.4e-16 Score=99.16 Aligned_cols=92 Identities=27% Similarity=0.516 Sum_probs=74.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC---cEEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG---TLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~i 78 (258)
||.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.+. .++ +|.|
T Consensus 13 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~---~~~~~~----------------~~~~~~~L~i 73 (107)
T 3irg_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAAS---ERLSFP----------------ADGAEHGLLL 73 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCC---SSEECC----------------EETTEEEEEE
T ss_pred CCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCC---CcEEEE----------------eCCCEEEEEE
Confidence 688888888999999999999999999999999999999877543 222211 122 7999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
.++ +.+|+|.|+|.+.|..+... ..+.|.|..+|
T Consensus 74 ~~~-~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~P 107 (107)
T 3irg_B 74 TAA-LPTDAGVYVCRARNAAGEAY-AAAAVTVLEPP 107 (107)
T ss_dssp SSC-CGGGCEEEEEEEEETTEEEE-EEEEEEEEC--
T ss_pred ccC-CHHhCEEEEEEEEcCCCcEE-EEEEEEEEcCC
Confidence 999 99999999999999988766 77888887654
No 318
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.67 E-value=8e-17 Score=115.65 Aligned_cols=125 Identities=13% Similarity=0.206 Sum_probs=86.9
Q ss_pred eecCCcEEEEeeeCccc----CceEEEEeCCcccCCCcc--------eEEecCCeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 124 AIAGEPLYLGCPVAGYP----IESITWQKGVQQLPLNRR--------QKVFPNGTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 124 ~~~g~~~~l~C~~~~~~----~~~i~W~~~~~~~~~~~~--------~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
+..|+.+.|.|.+.+.+ ...+.|++++..+..... ........|.|.++.. +|+|.|+|.+.+..+.
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDW-LNGKEFKCRVNSAAFP 93 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHH-HTTCCEEEEEECTTCS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHc-CCCCEEEEEEEccCCC
Confidence 78999999999998874 248999998866542210 0111224688888887 9999999999998763
Q ss_pred Cc-cceEEE--EeecCCccccCCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 192 SS-SQNVHI--SVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 192 ~~-~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
.. ...+.+ .+..+|.+...+.......|+.+.|.|.+.+.+|+ +.+.|++||+.+...
T Consensus 94 ~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 155 (207)
T 2vol_A 94 APIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENY 155 (207)
T ss_dssp SCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCE
T ss_pred CceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCc
Confidence 21 122322 34556666554433333469999999999654666 599999999988654
No 319
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.67 E-value=2.3e-16 Score=114.07 Aligned_cols=127 Identities=21% Similarity=0.362 Sum_probs=88.8
Q ss_pred CcceecCCcEEEEeeeCcc-cCceEEEEeCC--cccC----------------CCcceEEe---cCCeEEEEecccCCCC
Q psy14532 121 NVSAIAGEPLYLGCPVAGY-PIESITWQKGV--QQLP----------------LNRRQKVF---PNGTLLIENVQKDHDR 178 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~-~~~~i~W~~~~--~~~~----------------~~~~~~~~---~~~~l~i~~~~~~~~~ 178 (258)
...+.+|+.+.|.|.+.+. +.+.+.|++.. .... ...++.+. .+.+|.|.+++. +|+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~ 87 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQP-EDE 87 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCG-GGC
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCc-ccC
Confidence 5678899999999999988 88899999832 1110 01122221 223599999997 999
Q ss_pred cEEEEEEEeCCC----CCccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEeccc
Q psy14532 179 GVYWCTATNKQG----RSSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILS 248 (258)
Q Consensus 179 g~y~C~~~~~~~----~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~ 248 (258)
|.|.|.+.+..+ ......+.|.|.. +|.+...+....+..|+.++|.|.+.++.|.+ .|.|+++|..+..
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 166 (218)
T 3s96_B 88 AIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQ 166 (218)
T ss_dssp EEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--
T ss_pred EEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcC
Confidence 999999998764 1234456777774 44444333344455679999999996546766 9999999999976
No 320
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.67 E-value=8.4e-16 Score=106.78 Aligned_cols=156 Identities=17% Similarity=0.181 Sum_probs=102.1
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCC-eEEEeeC-CE-eC-cCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTP-HISWKLD-GY-PL-AGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~v~W~~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+...|.+..|.+|+++.|+|.+.. +.+ .+.|... ++ .+ ... .....|.|.+
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~------------------------~~~~~l~l~~ 56 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPG------------------------NNRKVYELSN 56 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSS------------------------SSEEEEEEEE
T ss_pred eEEECCCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEeccC------------------------CceeEEEEEe
Confidence 456778888999999999999864 444 4777631 11 11 000 0113578999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc--CCCcceecCCcEEEEeeeCc-ccCc--eEEEEeCCcccCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP--MGNVSAIAGEPLYLGCPVAG-YPIE--SITWQKGVQQLPL 155 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~-~~~~--~i~W~~~~~~~~~ 155 (258)
+ +. | |.|.|.+..... .....+.|.|+.+|.... +....+.+|+.++|.|.+.+ .|.. .|+|++++..+..
T Consensus 57 v-s~-~-g~y~C~~~c~~~-~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~ 132 (185)
T 1iam_A 57 V-QE-D-SQPMCYSNCPDG-QSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKR 132 (185)
T ss_dssp E-CS-C-BCCEEEEECSSC-EEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEE
T ss_pred c-Cc-C-CEEEEEEECCCC-ceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccc
Confidence 9 63 4 999999865544 444888999987764332 23345889999999999977 5654 5899999887643
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
........+.++.+... +++|+..|+|+|.+..+
T Consensus 133 ~~~~~~~~~~tl~~~~~-reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 133 EPAVGEPAEVTTTVLVR-RDHHGAQFSCRTELDLR 166 (185)
T ss_dssp EECCTTTEEEEEEEECC-SSCSSCEEEEEEEEECG
T ss_pred ccCCCccccEEEEEece-eccCCCeEEEEEEecCc
Confidence 22100011124555544 43555599999998875
No 321
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.67 E-value=5.2e-16 Score=98.52 Aligned_cols=94 Identities=22% Similarity=0.342 Sum_probs=75.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|++..+.... ++.+. ......+|.|.++
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~~~~-------------~~~~~~~L~i~~~ 71 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESS---KIHYT-------------NTSGVLTLEILDC 71 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCS---SEEEE-------------EETTEEEEEECSC
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCC---CEEEE-------------ECCCEEEEEEcCC
Confidence 6788888899999999999999999999999999999998876541 22111 0001236999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGA 113 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~ 113 (258)
..+|+|.|+|.+.|..|... ..+.|.|...
T Consensus 72 -~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~~ 101 (103)
T 3qp3_A 72 -HTDDSGTYRAVCTNYKGEAS-DYATLDVTGG 101 (103)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred -CcccCEEEEEEEEeCCCcEE-EEEEEEEECC
Confidence 99999999999999988776 7778887654
No 322
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.67 E-value=2.7e-16 Score=116.06 Aligned_cols=127 Identities=20% Similarity=0.314 Sum_probs=92.7
Q ss_pred CCcceecCCcEEEEeeeCc---ccCceEEEEeCCcccC------------------------------CCcceEEec--C
Q psy14532 120 GNVSAIAGEPLYLGCPVAG---YPIESITWQKGVQQLP------------------------------LNRRQKVFP--N 164 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~---~~~~~i~W~~~~~~~~------------------------------~~~~~~~~~--~ 164 (258)
..+.+.+|+.+.|.|.+.+ .+.+.+.|++++.... ...+..+.. +
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 89 (250)
T 2fbo_J 10 TEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAA 89 (250)
T ss_dssp SEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTS
T ss_pred CceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCc
Confidence 4567889999999999876 6788999999775421 111222222 3
Q ss_pred CeEEEEecccCCCCcEEEEEEEeCCCCCc----cceEEEEeecCC---ccccC-CCCCccCCCCeeeEEEEeccCCCCce
Q psy14532 165 GTLLIENVQKDHDRGVYWCTATNKQGRSS----SQNVHISVTVPP---KIAPF-EFQPDLHSGDRAGVQCLVTKGDPPLT 236 (258)
Q Consensus 165 ~~l~i~~~~~~~~~g~y~C~~~~~~~~~~----~~~~~l~v~~~p---~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~ 236 (258)
..|.|.+++. +|+|.|+|.+.+..+... +..+.|.|..++ .+... +....+.+|+.+.|.|.+ .+.|.+.
T Consensus 90 ~~L~I~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~g~p~p~ 167 (250)
T 2fbo_J 90 PTLRLTHVHP-QDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPC-TDCANAN 167 (250)
T ss_dssp CCEEECSCCG-GGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCE-ESCTTCE
T ss_pred ceEEEeeCCh-hhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEe-cCCCCCe
Confidence 5799999998 999999999998765332 346778877652 22221 223456779999999999 5878889
Q ss_pred eEEEECCEeccc
Q psy14532 237 ISWLKNGLPILS 248 (258)
Q Consensus 237 ~~W~~~g~~l~~ 248 (258)
|.|++++..+..
T Consensus 168 v~W~k~~~~~~~ 179 (250)
T 2fbo_J 168 VTWYTGPTFFEN 179 (250)
T ss_dssp EEEEEEEECSSC
T ss_pred eEEEeCCCcccc
Confidence 999999988865
No 323
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.67 E-value=1.5e-16 Score=115.13 Aligned_cols=124 Identities=17% Similarity=0.228 Sum_probs=86.0
Q ss_pred eecCCcEEEEeeeCcc---cC-ceEEEEeCCcccCCCcce--------EEecCCeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 124 AIAGEPLYLGCPVAGY---PI-ESITWQKGVQQLPLNRRQ--------KVFPNGTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 124 ~~~g~~~~l~C~~~~~---~~-~~i~W~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
+.+|+.++|.|.+.+. |. +.|.|++++..+...... .....+.|.|.++.. +|+|.|+|.+.+..+.
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~g~Y~C~~~~~~~~ 101 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW-MSGKEFKCKVNNKDLP 101 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHH-HTTCCEEEEEEETTCS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHc-CCCCeEEEEEECCcCC
Confidence 7789999999999876 33 799999998765432110 111234688888887 9999999999998653
Q ss_pred C-ccceEEE--EeecCCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEeccc
Q psy14532 192 S-SSQNVHI--SVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILS 248 (258)
Q Consensus 192 ~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~ 248 (258)
. ....+.+ .+..+|.+...+.......|+.++|.|.+.+.+|.+ .|.|+++|..+..
T Consensus 102 ~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 162 (218)
T 2rgs_A 102 SPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEEN 162 (218)
T ss_dssp SCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECC
T ss_pred CcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccC
Confidence 2 1222211 344566655444333334699999999996446765 9999999998854
No 324
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.67 E-value=2.6e-16 Score=111.25 Aligned_cols=120 Identities=14% Similarity=0.188 Sum_probs=87.3
Q ss_pred ceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc--ceEEecCCeEEEEecccCCCCcEEEEEEEeCCC-CCccceEEE
Q psy14532 123 SAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR--RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG-RSSSQNVHI 199 (258)
Q Consensus 123 ~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~-~~~~~~~~l 199 (258)
.+.+|++++|.|.+.+ +.+.+.|++++..+.... ......++.|.|.+++. +|+|.|+|.+.+..+ ...+..+.|
T Consensus 14 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~~~~~~~~~~s~~~~l 91 (188)
T 1oll_A 14 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNS-RMAGQYSCIYRVGELWSEPSNLLDL 91 (188)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCG-GGCEEEEEEEEETTEECCCCCCEEE
T ss_pred cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCc-ccCeEEEEEecCCCCCCCCCCceEE
Confidence 6889999999999875 346899999987653210 01112345799999997 999999999988643 233566777
Q ss_pred Eeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecc
Q psy14532 200 SVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPIL 247 (258)
Q Consensus 200 ~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~ 247 (258)
.|.. +|.+...+ ...+.+|+.++|.|.+ .+ +.+.|.|+++|..+.
T Consensus 92 ~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~ 139 (188)
T 1oll_A 92 VVTEMYDTPTLSVHP-GPEVISGEKVTFYCRL-DT-ATSMFLLLKEGRSSH 139 (188)
T ss_dssp EEESCSCCCEEEEES-CSEEETTCEEEEEEEC-SS-SCSEEEEEEESSSCE
T ss_pred EecccCCCCeEEECC-CCccccCCEEEEEEEc-CC-CCCEEEEEECCcccc
Confidence 7764 44444333 3567899999999998 34 456899999998765
No 325
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.67 E-value=4e-16 Score=109.30 Aligned_cols=119 Identities=17% Similarity=0.326 Sum_probs=88.4
Q ss_pred CcceecCCcEEEEeeeC--cccCceEEEEe--CCccc----------CCCcceEEecCCeEEEEecccCCCCcEEEEEEE
Q psy14532 121 NVSAIAGEPLYLGCPVA--GYPIESITWQK--GVQQL----------PLNRRQKVFPNGTLLIENVQKDHDRGVYWCTAT 186 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~--~~~~~~i~W~~--~~~~~----------~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~ 186 (258)
.+....|++++|.|... +.+.+.|.|++ ++..+ ....+..+..+++|.|.+++. +|+|.|+|.+.
T Consensus 8 ~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~-~DsG~Y~c~~~ 86 (182)
T 1hnf_A 8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKT-DDQDIYKVSIY 86 (182)
T ss_dssp EEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCG-GGCEEEEEEEE
T ss_pred EEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCCh-hhCEEEEEEEE
Confidence 35677899999999543 34567999999 77655 245667777889999999998 99999999999
Q ss_pred eCCCCCc-cceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEec
Q psy14532 187 NKQGRSS-SQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPI 246 (258)
Q Consensus 187 ~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l 246 (258)
+..+... ...+.|.|..+...+.. ...+..+.|.|.+ .+.|.+.|.|+++|+.+
T Consensus 87 n~~g~~~~~~~~~L~V~~~~~~P~i-----~~~~~~v~L~C~~-~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERVSKPKI-----SWTCINTTLTCEV-MNGTDPELNLYQDGKHL 141 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCCCCCEE-----EEETTTTEEEEEC-SSCSSCEEEEEESSCEE
T ss_pred eCCCceeEEEEEEEEEcCcCCCCEE-----EEccCcEEEEeEc-cCCCCCEEEEEECCEEC
Confidence 9876432 35567777754221111 0123479999999 57778999999999988
No 326
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.67 E-value=7.7e-16 Score=96.98 Aligned_cols=94 Identities=23% Similarity=0.386 Sum_probs=73.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.+..+.+|++++|.|.+.+.|.+.+.|+|++..+..... ++.... .....+|.|.++
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~--~~~~~~-------------~~~~~~L~i~~~ 69 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQR--RFAEEA-------------EGGLCRLRILAA 69 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTT--EEEEEC-------------GGGEEEEEESSC
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCC--EEEEEC-------------CCCEEEEEEccC
Confidence 68888888899999999999999999999999999999987764411 111100 001126999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEec
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
+..|+|.|+|.+.|..|... ..+.|.|..
T Consensus 70 -~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~ 98 (99)
T 1u2h_A 70 -ERGDAGFYTCKAVNEYGARQ-CEARLEVRG 98 (99)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEEC
T ss_pred -CcCCCEEEEEEEEECCCcee-EEEEEEEEC
Confidence 99999999999999988776 677777753
No 327
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.66 E-value=3.6e-16 Score=112.96 Aligned_cols=130 Identities=17% Similarity=0.253 Sum_probs=87.7
Q ss_pred CCCcceecCCcEEEEeee-Cccc-CceEEEEeCCc--ccC------------CCcceEEec---CCeEEEEecccCCCCc
Q psy14532 119 MGNVSAIAGEPLYLGCPV-AGYP-IESITWQKGVQ--QLP------------LNRRQKVFP---NGTLLIENVQKDHDRG 179 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~-~~~~-~~~i~W~~~~~--~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g 179 (258)
+....+.+|+.+.|.|.+ .+.+ .+.+.|++++. .+. ...++.+.. ...|.|.+++. +|+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G 85 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQT-GDEA 85 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCG-GGCE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCc-ccCE
Confidence 345678899999999995 4443 57999999542 210 122333322 23799999998 9999
Q ss_pred EEEEEEEeCCC-CCccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEecccc
Q psy14532 180 VYWCTATNKQG-RSSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSA 249 (258)
Q Consensus 180 ~y~C~~~~~~~-~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~ 249 (258)
.|.|.+.+..+ ........|.|.. +|.+...+.......|+.++|.|.+.++.|.+ .|.|+++|+.+..+
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~ 160 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 160 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCC
Confidence 99999998764 1223344566653 44444333222334688999999996546664 99999999998765
No 328
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=9.7e-17 Score=115.60 Aligned_cols=130 Identities=22% Similarity=0.393 Sum_probs=89.4
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccC------------CCcceEEec---CCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLP------------LNRRQKVFP---NGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g~y 181 (258)
+....+.+|+.++|.|.+.+.+.+.+.|+++. ..+. ...++.+.. ...|.|.++.. +|+|.|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 84 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQP-EDEAAY 84 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCG-GGCSEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCc-ccCEEE
Confidence 34567889999999999988877789999853 2221 123333322 23799999997 999999
Q ss_pred EEEEEeCCCC--CccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 182 WCTATNKQGR--SSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 182 ~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
+|.+.+.... .......|.|. .+|.+...+....+..|+.++|.|.+.+..|+ +.|.|+++|+.+..+
T Consensus 85 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 159 (212)
T 1nfd_E 85 YCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDG 159 (212)
T ss_dssp EEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred EEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCC
Confidence 9999973221 11233456663 34444443333345579999999999644465 899999999998765
No 329
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.66 E-value=2.6e-16 Score=97.96 Aligned_cols=89 Identities=18% Similarity=0.298 Sum_probs=71.3
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
||.|...+.++.+.+|+.+.|.|.+.|.|.+.+.|+|++ ..+.... .... .....+|.|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~---~~~~---------------~~~~~~L~i~ 63 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL---LVDA---------------KSSTTSIFFP 63 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS---EEEE---------------ETTEEEEECT
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE---EEEe---------------cCCEEEEEEC
Confidence 788888888999999999999999999999999999998 7664331 1100 0123569999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEE
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISV 110 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v 110 (258)
++ ...|+|.|+|.+.|..|... ..+.|.|
T Consensus 64 ~~-~~~D~G~Y~C~a~N~~G~~~-~~~~l~V 92 (93)
T 1wit_A 64 SA-KRADSGNYKLKVKNELGEDE-AIFEVIV 92 (93)
T ss_dssp TB-CGGGCEEEEEEEEETTEEEE-EEEEEEE
T ss_pred CC-ChhcCEEEEEEEEcCCCeEE-EEEEEEE
Confidence 99 99999999999999998766 7777765
No 330
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.66 E-value=2.7e-15 Score=105.05 Aligned_cols=159 Identities=16% Similarity=0.084 Sum_probs=103.0
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCC-eEEEeeCC--EeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTP-HISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~-~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
-++...|.+..+.+|+++.|+|.+.. +.+ .+.|...- ..+.. + .....+.|.
T Consensus 3 f~v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~---------g---------------~~~~~~~ls 57 (196)
T 3bn3_B 3 FWADLQPRVAFVERGGSLWLNCSTNC-PRPERGGLETSLRRNGTQR---------G---------------LRWLARQLV 57 (196)
T ss_dssp SCEEEESSEEEEETTEEEEEEEEECC-SSCSEEEEECSSEEEEEEE---------E---------------TTEEEEEEE
T ss_pred cEEEEcCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEccCCeeEcc---------c---------------cCceEEEEE
Confidence 35667888889999999999999864 444 67776421 11100 0 001137889
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeecc--CCCcceecCCcEEEEeeeCc-ccCce--EEEEeCCcccC
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRP--MGNVSAIAGEPLYLGCPVAG-YPIES--ITWQKGVQQLP 154 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~-~~~~~--i~W~~~~~~~~ 154 (258)
++ + +|.+.|.|.+....... ...+.|.|+..|.... .....+.+|+.++|.|.+.+ +|... |+|++++..+.
T Consensus 58 ~v-s-~d~~~~~C~~~c~~~~~-~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~ 134 (196)
T 3bn3_B 58 DI-R-EPETQPVCFFRCARRTL-QARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELI 134 (196)
T ss_dssp EE-C-SSEECCEEEEEETTEEE-EEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEE
T ss_pred EE-c-cCCCceEEEEECCCCce-EEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEee
Confidence 99 7 78888999976654333 4888999988764332 22234889999999999977 56544 89999987764
Q ss_pred CCcceEEecC-----CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 155 LNRRQKVFPN-----GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 155 ~~~~~~~~~~-----~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.......... ..+.+... +++++..|+|+|.+..+
T Consensus 135 ~~~~~~~~~~~~~~t~~~~~~~~-r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 135 RRSFAGEPPRARGAVLTATVLAR-REDHGANFSCRAELDLR 174 (196)
T ss_dssp EEECTTSCTTCCCEEEEEEEECC-GGGTTCEEEEEEEEECG
T ss_pred ccccccccccccceeEEEEEeee-eccCCCeEEEEEEccCC
Confidence 2210000011 23444443 43555599999998765
No 331
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.66 E-value=3.2e-16 Score=115.96 Aligned_cols=130 Identities=17% Similarity=0.254 Sum_probs=90.0
Q ss_pred CCCcceecCCcEEEEeeeCccc-----CceEEEEeCCc--cc------------CCCcceEEecC---CeEEEEecccCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP-----IESITWQKGVQ--QL------------PLNRRQKVFPN---GTLLIENVQKDH 176 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~-----~~~i~W~~~~~--~~------------~~~~~~~~~~~---~~l~i~~~~~~~ 176 (258)
+....+.+|+.++|.|.+.+.+ .+.+.|++++. .. ....++.+... .+|.|.+++. +
T Consensus 41 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~ 119 (252)
T 3bkj_L 41 PLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEA-E 119 (252)
T ss_dssp CSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-G
T ss_pred CceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCc-c
Confidence 4456788999999999998876 58999999542 11 01223333322 2799999997 9
Q ss_pred CCcEEEEEEEeCCCCCccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 177 DRGVYWCTATNKQGRSSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 177 ~~g~y~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
|+|.|.|.+.+..+........|.|.. +|.+...+....+..|+.++|.|.+.+.+|. +.|.|+++|+.+..+
T Consensus 120 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 196 (252)
T 3bkj_L 120 DLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 196 (252)
T ss_dssp GCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred cCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCC
Confidence 999999999887543223345566654 3444433333334468999999999654665 489999999988765
No 332
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.66 E-value=5.3e-16 Score=112.32 Aligned_cols=127 Identities=23% Similarity=0.416 Sum_probs=88.9
Q ss_pred CCCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~ 172 (258)
+....+.+|+.++|.|.+.+.+ .+.+.|+++. ..+. ...++.+.. ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 3456788999999999998754 6799999963 3221 112333322 247999999
Q ss_pred ccCCCCcEEEEEEEeCCCC---CccceEEEEeecC----CccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCE
Q psy14532 173 QKDHDRGVYWCTATNKQGR---SSSQNVHISVTVP----PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGL 244 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~---~~~~~~~l~v~~~----p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~ 244 (258)
+. +|+|.|.|.+.+..+. .....+.|.|... |.+...+....+..|+.+.|.|.+.++.|.+ .|.|+++|.
T Consensus 87 ~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 165 (219)
T 1c1e_H 87 KN-EDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (219)
T ss_dssp CG-GGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred Cc-ccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCc
Confidence 98 9999999999987531 1223456677653 3333223234567899999999995448888 999999998
Q ss_pred ec
Q psy14532 245 PI 246 (258)
Q Consensus 245 ~l 246 (258)
.+
T Consensus 166 ~~ 167 (219)
T 1c1e_H 166 SS 167 (219)
T ss_dssp CT
T ss_pred cc
Confidence 75
No 333
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=2.6e-16 Score=100.32 Aligned_cols=87 Identities=33% Similarity=0.538 Sum_probs=71.2
Q ss_pred ccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 117 RPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
..+....+.+|+.+.|.|.+.|.|.+.|.|++++..+....++.+..++ +|.|.++.. +|+|.|+|.|.|..|. .
T Consensus 18 ~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~-~ 95 (107)
T 3knb_B 18 RFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALP-TDAGVYVCRARNAAGE-A 95 (107)
T ss_dssp ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCG-GGCEEEEEEEEETTEE-E
T ss_pred eCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCCh-hhCEEEEEEEEECCCE-E
Confidence 3456678899999999999999999999999999998877766654433 699999997 9999999999999884 4
Q ss_pred cceEEEEeecCC
Q psy14532 194 SQNVHISVTVPP 205 (258)
Q Consensus 194 ~~~~~l~v~~~p 205 (258)
+..+.|.|..+|
T Consensus 96 ~~~~~l~V~~pP 107 (107)
T 3knb_B 96 YAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEEEC--
T ss_pred EEEEEEEEEcCC
Confidence 567788887665
No 334
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.65 E-value=5.8e-17 Score=118.52 Aligned_cols=130 Identities=15% Similarity=0.271 Sum_probs=71.3
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCc--cc------------CCCcceEEe---cCCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ--QL------------PLNRRQKVF---PNGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~--~~------------~~~~~~~~~---~~~~l~i~~~~~~~~~g~y 181 (258)
+....+.+|+++.|.|.+.+.+.+.+.|++++. .. ....++... .+.+|.|.+++. +|+|.|
T Consensus 30 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 108 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS-EDVADY 108 (233)
T ss_dssp CSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C-CCCSEE
T ss_pred CCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH-HHCEEE
Confidence 455678899999999999887778899998532 11 001122211 122699999997 999999
Q ss_pred EEEEEeCCCCCccceEEEEeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEecccc
Q psy14532 182 WCTATNKQGRSSSQNVHISVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPILSA 249 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~~~ 249 (258)
.|.+.+..+........|.|.. +|.+...+....+..|+.++|.|.+.+.+|++ .+.|+++|+.+..+
T Consensus 109 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 180 (233)
T 3bqu_C 109 YCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 180 (233)
T ss_dssp EEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CC
T ss_pred EEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCC
Confidence 9999887543323333445543 44444433333344699999999996445654 89999999988765
No 335
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=109.98 Aligned_cols=131 Identities=20% Similarity=0.291 Sum_probs=93.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCc---eEEEEeCCcccCCCc------------------ceEE------ecCCeEEEEe
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIE---SITWQKGVQQLPLNR------------------RQKV------FPNGTLLIEN 171 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~---~i~W~~~~~~~~~~~------------------~~~~------~~~~~l~i~~ 171 (258)
+..+.+..|+.+.|.|.+.+.+.+ .|.|++++....... +... ..+.+|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 455778899999999999887654 589999775543211 1111 1234699999
Q ss_pred cccCCCCcEEEEEEEeCCCCCccceEEEEeecCCcccc-CCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 172 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAP-FEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 172 ~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
++. +|+|.|.|.+.+..+........+.+..++.... ......+..|+.+.+.|.+ .+.|++.|.|++++..+....
T Consensus 86 v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~-~g~p~p~i~W~~~~~~~~~~~ 163 (218)
T 4frw_A 86 AVQ-ADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTA-EGSPAPSVTWDTEVKGTTSSR 163 (218)
T ss_dssp CCG-GGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEE-EEBSCCEEEEEESSCCEEEEE
T ss_pred ccH-HHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeec-cCCcCceEEEEECCcccccCc
Confidence 997 9999999999887654444444455554443332 2334567789999999999 688999999999998887654
Q ss_pred c
Q psy14532 251 G 251 (258)
Q Consensus 251 ~ 251 (258)
.
T Consensus 164 ~ 164 (218)
T 4frw_A 164 S 164 (218)
T ss_dssp E
T ss_pred e
Confidence 3
No 336
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.65 E-value=7.1e-16 Score=96.33 Aligned_cols=86 Identities=21% Similarity=0.416 Sum_probs=70.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.+..+.+|+++.|.|.+.+.| +.+.|+|++..+... .++.+ .+++|.|.++
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~---~~~~~-----------------~~~~L~i~~~ 67 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVES---NRTRI-----------------TGEEVEVRDS 67 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCC---SSEEE-----------------CSSEEEESSC
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCC---CCEEE-----------------eCCEEEECCC
Confidence 67888888899999999999999999887 799999998776543 11111 2568999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEE
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISV 110 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v 110 (258)
+..|+|.|+|.+.|..|... ..+.|.|
T Consensus 68 -~~~D~G~Y~C~a~n~~g~~~-~~~~l~V 94 (95)
T 2ckn_A 68 -IPADSGLYACVTSSPSGSDT-TYFSVNV 94 (95)
T ss_dssp -CGGGSEEEEEEEEETTEEEE-EEEEEEE
T ss_pred -ChHHCEEEEEEeccCCCcEE-EEEEEEE
Confidence 99999999999999888765 6666665
No 337
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=4.8e-16 Score=97.87 Aligned_cols=92 Identities=18% Similarity=0.304 Sum_probs=71.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.++.+.+|+++.|.|.+ .|.+.+.|+|+|..+... .++.+.. .....+|.|.++
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~---~r~~i~~-------------~~~~~~L~I~~v 68 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQES---DRLKVVQ-------------KGRIHKLVIANA 68 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCC---SSEEEEE-------------CSSEEEEEESSC
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC---CcEEEEE-------------eCCEEEEEECCC
Confidence 6888899999999999999999999 678899999999988654 2222210 001236999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
..+|+|.|+|.+.|. ... ..+.|.|..+|.
T Consensus 69 -~~~D~G~Y~C~a~N~--~~~-~~a~L~V~~~P~ 98 (100)
T 2yuz_A 69 -LTEDEGDYVFAPDAY--NVT-LPAKVHVISGPS 98 (100)
T ss_dssp -CGGGCSEEEEEESSS--CCC-EEEEEEEECCSC
T ss_pred -ChhhCEEEEEEEcCC--Cee-EEEEEEEeCCCC
Confidence 999999999999987 223 677888887653
No 338
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.65 E-value=1.3e-15 Score=110.47 Aligned_cols=127 Identities=16% Similarity=0.293 Sum_probs=90.5
Q ss_pred CCCcceecCCcEEEEeeeCccc-----CceEEEEeCCccc---------------CCCcceEEec------CCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP-----IESITWQKGVQQL---------------PLNRRQKVFP------NGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~-----~~~i~W~~~~~~~---------------~~~~~~~~~~------~~~l~i~~~ 172 (258)
...+.+..|+.+.|.|.+.+.| ...+.|++++..+ ....+..+.. +.+|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 3445788999999999987655 3489999964211 0112222222 237999999
Q ss_pred ccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEEC-CEecccc
Q psy14532 173 QKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKN-GLPILSA 249 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~-g~~l~~~ 249 (258)
+. +|+|.|+|.+.+ .+ .....+.|.|..++..........+..|+.+.|.|.+ .+.|.+.+.|+++ |..+...
T Consensus 88 ~~-~D~G~Y~C~~~~-~~-~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~-~g~P~p~i~W~~~~g~~~~~~ 161 (222)
T 3sbw_C 88 KL-QDAGVYRCMISY-GG-ADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQA-EGYPKAEVIWTSSDHQVLSGK 161 (222)
T ss_dssp CG-GGCEEEEEEEES-SS-EEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEE-EEBSCCEEEEEETTCCEECCE
T ss_pred cc-ccCeEEEEEEEe-CC-CceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEe-cCCCCCeEEEEECCCceecCc
Confidence 97 999999999998 33 3456677888876654433322356789999999999 5799999999998 6666543
No 339
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.65 E-value=4.8e-15 Score=110.52 Aligned_cols=175 Identities=15% Similarity=0.282 Sum_probs=100.3
Q ss_pred eceeeeecCCCceEEEEEEee--cCCCeEEEeeCC--EeCcCCccccceec-ccceeeccccccceeeee-----CCcEE
Q psy14532 8 KFIQQTLQPGPPVSLKCIATG--NPTPHISWKLDG--YPLAGDRHENKNRI-GEARVQQLPLNRRQKVFP-----NGTLL 77 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~--~~~~~v~W~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~l~ 77 (258)
.+..+.+.+|++|+|.|.+.+ .....+.|||.. .....- ..... +........+..|..... +.+|.
T Consensus 29 q~~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l---~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 105 (267)
T 3u1s_H 29 QSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWM---GWMSHEGDKTGLAQKFQGRVTITRDSGASTVYME 105 (267)
T ss_dssp ECCCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEE---EEECTTSSCEEECGGGTTTEEEEECGGGCCEEEE
T ss_pred eeCCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEE---EEEeCCCCceecCcccCCcEEEEEcCCCCEEEEE
Confidence 334577899999999999865 235689999842 111000 00000 000111122223333332 23599
Q ss_pred EeecccCCCceEEEEEEEe-------CC------------c-c----eeeceEEEEEec----CCeec-cCCCcceecCC
Q psy14532 78 IENVQKDHDRGVYWCTATN-------KQ------------G-R----SSSQNVHISVTG----APFVR-PMGNVSAIAGE 128 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~-------~~------------~-~----~~~~~~~l~v~~----~~~~~-~~~~~~~~~g~ 128 (258)
|.++ +.+|+|.|.|.+.+ .. . . .......|.|.. +|.+. ..+......|+
T Consensus 106 I~~v-~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~ 184 (267)
T 3u1s_H 106 LRGL-TADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGG 184 (267)
T ss_dssp ECSC-CGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETT
T ss_pred ECCC-ChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCC
Confidence 9999 99999999999962 10 0 0 111344666652 23222 12333346789
Q ss_pred cEEEEeeeCc-cc-CceEEEEeCCcccCCCcc---eEEecC------CeEEEEecccCCCCcEEEEEEEeCCC
Q psy14532 129 PLYLGCPVAG-YP-IESITWQKGVQQLPLNRR---QKVFPN------GTLLIENVQKDHDRGVYWCTATNKQG 190 (258)
Q Consensus 129 ~~~l~C~~~~-~~-~~~i~W~~~~~~~~~~~~---~~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~ 190 (258)
.+.|.|.+.+ .| .+.+.| ++..+..... .....+ ..|.|..... +| +.|+|.+.+...
T Consensus 185 ~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~-~~-~~ytC~v~h~~~ 253 (267)
T 3u1s_H 185 TAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTYICNVNHKPS 253 (267)
T ss_dssp EEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGG-GT-CCCEEEEEEGGG
T ss_pred cEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhc-CC-CEEEEEEEECCC
Confidence 9999999977 45 468999 5554432110 111122 2477777665 67 999999999753
No 340
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.65 E-value=2e-15 Score=111.67 Aligned_cols=132 Identities=12% Similarity=0.119 Sum_probs=93.2
Q ss_pred cCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcce----EEecCCeEEEEecccCCCCcEEEEEEEe
Q psy14532 112 GAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQ----KVFPNGTLLIENVQKDHDRGVYWCTATN 187 (258)
Q Consensus 112 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~----~~~~~~~l~i~~~~~~~~~g~y~C~~~~ 187 (258)
.+|.+...+...+.+|++++|.|.+.+ +.+.+.|+|++..+...... ....++.|.|.+++. +|+|.|+|.+.+
T Consensus 6 ~kP~i~~~P~~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPGPLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQ-DLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSCSEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCT-TTCEEEEEEEEC
T ss_pred CCCEEEEcCCCEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCc-ccCEEEEEeEec
Confidence 345555444467889999999999874 46789999998765321110 011345799999997 999999999986
Q ss_pred CC----CCCccceEEEEeecC---CccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccc
Q psy14532 188 KQ----GRSSSQNVHISVTVP---PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILS 248 (258)
Q Consensus 188 ~~----~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~ 248 (258)
.. ....+..+.|.|... |.+...+. ..+.+|+.++|.|.+ .+.+ +.|.|+|+|+.+..
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~-~~~~-~~~~w~k~g~~~~~ 148 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSS-RSSY-DMYHLSREGEAHER 148 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEEC-SSCC-SEEEEEETTSSCEE
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeC-CCCC-cEEEEEECCcccCc
Confidence 43 123466777887653 44433332 468899999999999 4544 68999999988764
No 341
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=7.5e-16 Score=99.02 Aligned_cols=96 Identities=27% Similarity=0.380 Sum_probs=75.5
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeC--CcEEE
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPN--GTLLI 78 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~i 78 (258)
.+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+.... .++.+. ...+ .+|.|
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~--~~~~~~--------------~~~~~~~~L~i 70 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKS--DHYTIQ--------------RDLDGTCSLHT 70 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTC--SSEEEE--------------ECTTCEEEEEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCC--CeEEEE--------------ECCCcEEEEEE
Confidence 37888888899999999999999999999999999999988775431 111111 0012 26999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
.++ +..|+|.|+|.+.|..|... ..+.|.|..++
T Consensus 71 ~~v-~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~~~ 104 (110)
T 2dm2_A 71 TAS-TLDDDGNYTIMAANPQGRIS-CTGRLMVQAVN 104 (110)
T ss_dssp SSC-CTTTCSCCEEEEECTTCCEE-ECCCEEEECCS
T ss_pred CCC-ChhhCEEEEEEEEECCCeEE-EEEEEEEECCC
Confidence 999 99999999999999988776 77778887654
No 342
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=5.1e-16 Score=97.80 Aligned_cols=88 Identities=27% Similarity=0.484 Sum_probs=70.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+.... .. ......+|.|.++
T Consensus 11 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~---~~----------------~~~~~~~L~i~~v 71 (99)
T 2yr3_A 11 APSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYAR---ST----------------CEAGVAELHIQDA 71 (99)
T ss_dssp EEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCC---CE----------------EETTEEEEEECSC
T ss_pred CCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccc---eE----------------eeCCeEEEEECCC
Confidence 6788888889999999999999999999999999999987765331 00 0112357999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEE
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISV 110 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v 110 (258)
...|+|.|+|.+.|..|... ..+.|.|
T Consensus 72 -~~~D~G~Y~C~a~N~~g~~~-~~~~l~V 98 (99)
T 2yr3_A 72 -LPEDHGTYTCLAENALGQVS-CSAWVTV 98 (99)
T ss_dssp -CTTCCBCEEEEEECSSCEEE-EECCEEE
T ss_pred -ChhhCEEEEEEEEECCCeEE-EEEEEEE
Confidence 99999999999999988765 5666655
No 343
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.64 E-value=1.8e-15 Score=95.24 Aligned_cols=92 Identities=24% Similarity=0.429 Sum_probs=72.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.+.. .....+|.|.++
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~---~~~~~~~-------------~~~~~~L~i~~~ 69 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQG---GKYKLSE-------------DKGGFFLEIHKT 69 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSS---SSEEEEE-------------ETTEEEEEECSC
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCC---CCEEEEE-------------eCCEEEEEECCC
Confidence 688888889999999999999999999999999999999887544 2221110 001236999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVT 111 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 111 (258)
...|+|.|+|.+.|..+... ..+.|.|.
T Consensus 70 -~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 97 (99)
T 3puc_A 70 -DTSDSGLYTCTVKNSAGSVS-SSCKLTIK 97 (99)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred -CcccCEEEEEEEEeCCCcEe-EEEEEEEE
Confidence 99999999999999988765 77777765
No 344
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=1.1e-15 Score=111.84 Aligned_cols=130 Identities=16% Similarity=0.337 Sum_probs=87.8
Q ss_pred CCCcceecCCcEEEEeeeCccc-Cc-eEEEEeCC--ccc------------CCCcceEEe---cCCeEEEEecccCCCCc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP-IE-SITWQKGV--QQL------------PLNRRQKVF---PNGTLLIENVQKDHDRG 179 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~-~~-~i~W~~~~--~~~------------~~~~~~~~~---~~~~l~i~~~~~~~~~g 179 (258)
+....+.+|+.++|.|.+.+.+ .+ .+.|+++. ... ....++... ....|.|.+++. +|+|
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G 104 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRS-EDEA 104 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCS-TTCS
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCH-HHCE
Confidence 4556788999999999998754 34 79999863 221 011233332 223799999997 9999
Q ss_pred EEEEEEEeCCCC--CccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 180 VYWCTATNKQGR--SSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 180 ~y~C~~~~~~~~--~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
.|+|.+.+..+. .......|.|. .+|.+...+.......|+.++|.|.+.+.+|+ +.|.|++||+.+..+
T Consensus 105 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 181 (234)
T 2j6e_L 105 DYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAG 181 (234)
T ss_dssp EEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSS
T ss_pred EEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCC
Confidence 999999987651 12223445553 34444433333334468899999999654565 599999999998654
No 345
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.63 E-value=4.7e-15 Score=106.84 Aligned_cols=127 Identities=21% Similarity=0.360 Sum_probs=87.8
Q ss_pred CCCcceecCCcEEEEeeeCcc-------cCceEEEEeCCccc-----------------CCCcceEEec-----CCeEEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGY-------PIESITWQKGVQQL-----------------PLNRRQKVFP-----NGTLLI 169 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~-------~~~~i~W~~~~~~~-----------------~~~~~~~~~~-----~~~l~i 169 (258)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++++... ....+..+.. +.+|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 445678899999999998653 46789999976421 0112333322 237999
Q ss_pred EecccCCCCcEEEEEEEeCCCCC---ccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccC---CCCceeEEEECC
Q psy14532 170 ENVQKDHDRGVYWCTATNKQGRS---SSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKG---DPPLTISWLKNG 243 (258)
Q Consensus 170 ~~~~~~~~~g~y~C~~~~~~~~~---~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~---~p~~~~~W~~~g 243 (258)
.+++. +|+|.|.|.+.+..+.. .+..+.|.|..++..+.......+.+|+.++|.|.+... .|.+.+.|++++
T Consensus 87 ~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~ 165 (214)
T 2zg1_A 87 GDARM-EDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNA 165 (214)
T ss_dssp CSCCG-GGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEESST
T ss_pred ccCCH-hhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeCCC
Confidence 99997 99999999999875211 135677888775432222112236789999999999533 478999999998
Q ss_pred Eec
Q psy14532 244 LPI 246 (258)
Q Consensus 244 ~~l 246 (258)
..+
T Consensus 166 ~~~ 168 (214)
T 2zg1_A 166 LSP 168 (214)
T ss_dssp TSS
T ss_pred Ccc
Confidence 654
No 346
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.63 E-value=5.9e-16 Score=112.21 Aligned_cols=124 Identities=19% Similarity=0.340 Sum_probs=89.4
Q ss_pred CCCcceecCCcEEEEeeeCc-ccCc----eEEEEeCCcccCC-------------CcceEEe--------cCCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAG-YPIE----SITWQKGVQQLPL-------------NRRQKVF--------PNGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~-~~~~----~i~W~~~~~~~~~-------------~~~~~~~--------~~~~l~i~~~ 172 (258)
+..+.+.+|+.+.|.|.+.+ .+.+ .+.|++++..... ..+..+. .+.+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 44567789999999999854 4433 4999998643211 2233332 2568999999
Q ss_pred ccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeee-EEEEeccCCCCceeEEEECCE
Q psy14532 173 QKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAG-VQCLVTKGDPPLTISWLKNGL 244 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~-l~C~~~~~~p~~~~~W~~~g~ 244 (258)
+. +|+|.|+|.+.+......+..+.|.|..+|.+...+.... ..|+.+. |.|.+..+.|.+.+.|++++.
T Consensus 86 ~~-~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~ 156 (221)
T 3eow_R 86 RV-EDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLG 156 (221)
T ss_dssp SC-CCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSS
T ss_pred Ch-HHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCC
Confidence 97 9999999999987622455667778888887665443333 6788885 999996789999999998743
No 347
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.63 E-value=2e-15 Score=104.85 Aligned_cols=118 Identities=14% Similarity=0.215 Sum_probs=85.3
Q ss_pred cceecCCcEEEEeeeCcccCceEEEEeCCcccC------------CCcceEE-ecCCeEEEEecccCCCCcEEEEEEEeC
Q psy14532 122 VSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP------------LNRRQKV-FPNGTLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~------------~~~~~~~-~~~~~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
+.+..|++++|.|.+.+ |.+.|.|++++..+. ...+..+ ..+++|.|.+++. +|+|.|.|.+.+.
T Consensus 5 v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~-~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTS-SDEDEYEMESPNI 82 (171)
T ss_dssp EEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCG-GGCEEEEEECTTC
T ss_pred EEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCCh-hhCceEEEEEeCC
Confidence 46788999999999854 788999999775321 1123333 2567899999998 9999999999887
Q ss_pred CCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 189 QGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 189 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
.+ ...+.|.|..++..+..... +....|.|.+ .+.|.+.+.|+++|+.+....
T Consensus 83 ~~---~~~~~L~V~~~~~~p~i~~~-----~~~~~L~C~~-~~~p~p~i~W~~~~~~l~~~~ 135 (171)
T 1ccz_A 83 TD---TMKFFLYVLEMVSKPMIYWE-----CSNATLTCEV-LEGTDVELKLYQGKEHLRSLR 135 (171)
T ss_dssp CS---CEEEEEEEECCCCCCEEEEE-----TTTTEEEEEC-SSCSSCEEEEEETTEEEEEES
T ss_pred CC---cEEEEEEEECcCCCCEEEEe-----cCCcEEEEEe-CCCCCcEEEEEECCEECcCCc
Confidence 65 56777888765432222111 1113899999 567889999999999987543
No 348
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=4.4e-16 Score=100.11 Aligned_cols=97 Identities=31% Similarity=0.521 Sum_probs=76.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+............ ....+|.|.++
T Consensus 9 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~---------------~~~~~L~i~~v 73 (110)
T 2dm3_A 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRE---------------NGVHSLIIEPV 73 (110)
T ss_dssp CCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECT---------------TSCEEEEESSC
T ss_pred CCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEec---------------CCeEEEEEeeC
Confidence 788988999999999999999999999999999999998776543110000000 01237999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
+..|+|.|+|.+.|..+... ..+.|.|..++.
T Consensus 74 -~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~ 105 (110)
T 2dm3_A 74 -TSRDAGIYTCIATNRAGQNS-FSLELVVAAKES 105 (110)
T ss_dssp -CGGGCSBBCEEEECSSCEEE-ECCEEEEECCCC
T ss_pred -CcccCEEEEEEEECCCCEEE-EEEEEEEeCCCC
Confidence 99999999999999988765 788888876653
No 349
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.63 E-value=1.1e-15 Score=112.83 Aligned_cols=126 Identities=15% Similarity=0.150 Sum_probs=86.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCce-----EEEEeCCcccCCC---------------cceEE------ecCCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIES-----ITWQKGVQQLPLN---------------RRQKV------FPNGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~-----i~W~~~~~~~~~~---------------~~~~~------~~~~~l~i~~~ 172 (258)
+....+..|+.+.|.|.+.+.|.+. +.|++++...... .+..+ ..+.+|.|.++
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 3445788999999999998776654 9999964332100 00000 12235999999
Q ss_pred ccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEecc
Q psy14532 173 QKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPIL 247 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~ 247 (258)
+. +|+|.|+|.+.+..+ .....+.|.|..+|.+...+. ..+..|+.+.|.|.+.++.|.+ .|.|+++|+.+.
T Consensus 90 ~~-~D~G~Y~C~~~~~~~-~~~~~~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~ 162 (248)
T 3pv7_A 90 QL-EEAGEYRCEVVVTPL-KAQGTVQLEVVASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFP 162 (248)
T ss_dssp CG-GGCEEEEEEEEETTE-EEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSC
T ss_pred CH-HHCeEEEEEEEeCCc-cceeEEEEEEecCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCC
Confidence 97 999999999998765 345677888888887766553 3355688889999996448888 999999996543
No 350
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=3.2e-15 Score=97.28 Aligned_cols=87 Identities=16% Similarity=0.289 Sum_probs=68.3
Q ss_pred ceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCce
Q psy14532 9 FIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDRG 88 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G 88 (258)
+..+.+.+|+++.|.|.+.+.|.+.+.|+|++..+... +..+. ......+|.|.++ ...|+|
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~----~~~~~-------------~~~~~~~L~i~~~-~~~D~G 92 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTS----RVHVR-------------TSDFDTVFFVRQA-ARSDSG 92 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCS----SCEEE-------------ECSSEEEEEESSC-CTTTCE
T ss_pred CCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCC----cEEEE-------------ECCCeEEEEECCC-ChhcCE
Confidence 45678899999999999999999999999999887522 11111 0011245999999 999999
Q ss_pred EEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 89 VYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 89 ~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
.|+|.+.|..|... ..+.|.|...|
T Consensus 93 ~Y~C~a~N~~G~~~-~~~~l~V~~~P 117 (118)
T 2e7c_A 93 EYELSVQIENMKDT-ATIRIRVVEKA 117 (118)
T ss_dssp EEEEEEECSSCEEC-CEEEEEEECCC
T ss_pred EEEEEEEeCCCeEE-EEEEEEEEcCC
Confidence 99999999998766 88888887654
No 351
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.62 E-value=2.1e-15 Score=96.55 Aligned_cols=101 Identities=13% Similarity=0.213 Sum_probs=69.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCC---CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPT---PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
.|.|...|.++.+.+|++++|.|.+.+.|. +.|.|+|++..........++.+... ..+......++|.|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~L~I 76 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDS-------YDRASKVYLFELHI 76 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEE-------EETTTTEEEEEEEE
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeE-------EecccccceEEEEE
Confidence 477888889999999999999999999887 89999997621111000011111000 00000112457999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEe
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 111 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 111 (258)
.++ +..|+|.|+|.+.|..|... ..+.|.|.
T Consensus 77 ~~v-~~~D~G~Y~C~a~N~~G~~~-~~~~L~V~ 107 (108)
T 3cx2_A 77 TDA-QPAFTGSYRCEVSTKDKFDC-SNFNLTVH 107 (108)
T ss_dssp CSC-CGGGCEEEEEEEECSSCEEE-EEEEEEEE
T ss_pred ecC-CCccCEEEEEEEecCCCceE-EEEEEEEe
Confidence 999 99999999999999998776 77888775
No 352
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.62 E-value=1.4e-15 Score=107.01 Aligned_cols=118 Identities=17% Similarity=0.199 Sum_probs=86.2
Q ss_pred CcceecCCcEEEEeeeCcccCceEEEEeCCcccCC--------------CcceEEe----c--CCeEEEEecccCCCCcE
Q psy14532 121 NVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL--------------NRRQKVF----P--NGTLLIENVQKDHDRGV 180 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~--------------~~~~~~~----~--~~~l~i~~~~~~~~~g~ 180 (258)
.+.+.+|+.+.|.|.+.+.|.+.+.|++++..... ..+.... . ..+|.|.++.. +|+|.
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~-~D~G~ 82 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKI-EDSDT 82 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCG-GGCEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCH-HHCEE
Confidence 35678999999999999888899999998753111 1222222 1 33599999997 99999
Q ss_pred EEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 181 YWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 181 y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
|+|.+.+..+ .+.|.|...+ .+....+.+|+.++|.|.+ .+.|.+.+.|+++|..+...
T Consensus 83 Y~C~~~~~~~-----~~~l~V~~~~----~~~~~~v~~g~~~~l~C~~-~~~p~~~v~W~~~~~~~~~~ 141 (184)
T 2ny1_B 83 YICEVEDQKE-----EVQLLVFGLT----ANSDTHLLQGQSLTLTLES-PPGSSPSVQCRSPRGKNIQG 141 (184)
T ss_dssp EEEEETTEEE-----EEEEEEEEEE----ESSCSEEETTCCEEEEEEC-CTTCCCEEEEECTTSCEEEE
T ss_pred EEEEEEcCCC-----cEEEEEEEec----CCCCceeecCCCEEEEEEc-CCCCCCEEEEEeCCCccccC
Confidence 9999987643 4455555321 1224467899999999999 56799999999998766443
No 353
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.62 E-value=4.7e-15 Score=93.49 Aligned_cols=94 Identities=24% Similarity=0.450 Sum_probs=72.9
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+..... .++.+.. ....++|.|.++
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~-~~~~~~~-------------~~~~~~L~i~~v 70 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQ-GRFHIEN-------------TDDLTTLIIMDV 70 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGG-GTEEEEE-------------CSSEEEEEESSC
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCC-CEEEEEe-------------cCCEEEEEEeec
Confidence 67888888889999999999999999999999999999987753311 1211110 001257999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVT 111 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 111 (258)
...|+|.|+|.+.|..+... ..+.|.|.
T Consensus 71 -~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~ 98 (100)
T 3irg_A 71 -QKQDGGLYTLSLGNEFGSDS-ATVNIHIR 98 (100)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred -CcccCEEEEEEEEeCCCcEE-EEEEEEEE
Confidence 99999999999999988765 77777765
No 354
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.62 E-value=4.2e-15 Score=108.11 Aligned_cols=125 Identities=19% Similarity=0.269 Sum_probs=85.0
Q ss_pred CCcceecCCcEEEEeeeCcccCc---eEEEEeCCcccC-----------------CCcceEEe------cCCeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPIE---SITWQKGVQQLP-----------------LNRRQKVF------PNGTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~---~i~W~~~~~~~~-----------------~~~~~~~~------~~~~l~i~~~~ 173 (258)
.++.+.+|++++|.|.+.+.+.+ .|.|+|++.... ...+.... .+.+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 44678899999999998764433 799998764321 01111111 12369999999
Q ss_pred cCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECC-Eeccc
Q psy14532 174 KDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNG-LPILS 248 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g-~~l~~ 248 (258)
. +|+|.|+|.|.|..+. . ...+.+...+..........+..|+.+.|.|.+.++.|.+.|.|++++ ..+..
T Consensus 92 ~-~D~G~Y~C~a~n~~~~-~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~ 163 (226)
T 4f80_A 92 A-SDSGKYLCYFQDGDFY-E--KALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPT 163 (226)
T ss_dssp G-GGCEEEEEEEEETTEE-E--EEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCC
T ss_pred h-HHCeeEEEEEECCCcE-E--EEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCC
Confidence 7 9999999999997653 2 233444443333333334567789999999999655799999999854 44443
No 355
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.62 E-value=2.2e-15 Score=93.38 Aligned_cols=89 Identities=20% Similarity=0.219 Sum_probs=67.1
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|++++|.|.+.+ +.+.+.|+|+|..+... .++.+.. .....+|.|.+
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~---~~~~i~~-------------~g~~~~L~I~~ 66 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS---PDCEIIE-------------DGKKHILILHN 66 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCB---TTEEEEE-------------ETTEEEEEECS
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC---CCEEEEE-------------ECCEEEEEECC
Confidence 3688999999999999999999999976 45789999999988654 2222210 00123799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEec
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
+ +.+|+|.|+|.+.|.. .+..|.|..
T Consensus 67 v-~~~D~G~Y~C~a~n~~-----~sa~L~V~~ 92 (93)
T 1waa_A 67 C-QLGMTGEVSFQAANTK-----SAANLKVKE 92 (93)
T ss_dssp C-CGGGCEEEEEEETTEE-----EEEEEEEEC
T ss_pred C-ChhhCEEEEEEECCCc-----EEEEEEEEc
Confidence 9 9999999999997642 455666653
No 356
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.62 E-value=2.8e-16 Score=114.96 Aligned_cols=156 Identities=17% Similarity=0.236 Sum_probs=82.7
Q ss_pred eEEEEEEEeCCcceeeceEEEEEecCCee--ccCCCcc-eecCCcEEEEeeeCcc---c-CceEEEEeCCcccCCCcce-
Q psy14532 88 GVYWCTATNKQGRSSSQNVHISVTGAPFV--RPMGNVS-AIAGEPLYLGCPVAGY---P-IESITWQKGVQQLPLNRRQ- 159 (258)
Q Consensus 88 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~--~~~~~~~-~~~g~~~~l~C~~~~~---~-~~~i~W~~~~~~~~~~~~~- 159 (258)
|.|.|.+.+.-+... . .. +..+|.+ ..+.... +..|+.+.|.|.+.+. | ...|+|++++..+......
T Consensus 1 ~~~~~~~~~~~~~c~-~--~~-~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~ 76 (240)
T 4acp_A 1 GTKSCDKTHTCPPCP-A--PE-LLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKP 76 (240)
T ss_dssp --------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECC
T ss_pred CceeeeeeecCCCCC-c--cc-cCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceecc
Confidence 689999887644211 1 10 1112222 2233333 4569999999999885 3 3489999999876432111
Q ss_pred -EEecC------CeEEEEecccCCCCcEEEEEEEeCCCC-CccceEEE--EeecCCccccCCCCCccCCCCeeeEEEEec
Q psy14532 160 -KVFPN------GTLLIENVQKDHDRGVYWCTATNKQGR-SSSQNVHI--SVTVPPKIAPFEFQPDLHSGDRAGVQCLVT 229 (258)
Q Consensus 160 -~~~~~------~~l~i~~~~~~~~~g~y~C~~~~~~~~-~~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 229 (258)
....+ +.|.|..... +|.|.|+|.|.+..+. .....+.+ .+..+|.+.+.+.......|+.++|.|.+.
T Consensus 77 ~~~~~~g~~~~~s~L~i~~~~~-~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~ 155 (240)
T 4acp_A 77 REEQYNSTYRVVSVLTVLHQDW-LNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVK 155 (240)
T ss_dssp CEEC---CEEEEEEEECCHHHH-HHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEE
T ss_pred ceECCCCeEEEEEEEEEechhc-cCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEe
Confidence 01112 2466655555 6889999999997652 22222221 233466665554443334589999999996
Q ss_pred cCCCC-ceeEEEECCEeccc
Q psy14532 230 KGDPP-LTISWLKNGLPILS 248 (258)
Q Consensus 230 ~~~p~-~~~~W~~~g~~l~~ 248 (258)
+.+|. ..+.|++||+.+..
T Consensus 156 gf~P~~i~v~W~k~g~~~~~ 175 (240)
T 4acp_A 156 GFYPSDIAVEWESNGQPENN 175 (240)
T ss_dssp EEBSSCCEEEEEETTEECSS
T ss_pred EEeCCCcEEEEEECCEECCC
Confidence 55676 48999999998864
No 357
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.62 E-value=1.3e-15 Score=97.62 Aligned_cols=93 Identities=29% Similarity=0.485 Sum_probs=66.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.+...+.+..+.+|+++.|.|.+.+.|.+.+.|++++..+... ..... ...+++|.|.++
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~---~~~~~---------------~~~~~~L~i~~v 71 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVED---SGIVL---------------KDGNRNLTIRRV 71 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCB---TTEEE---------------ETTTTEEEECSC
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccC---CCeEE---------------eCCCcEEEEeec
Confidence 688888888999999999999999999888999999998766543 11111 113568999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
+.+|+|.|+|.+.|..|... ..+.|.|..++
T Consensus 72 -~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~ 102 (108)
T 3kvq_A 72 -RKEDEGLYTCQACSVLGCAK-VEAFFIIEGAQ 102 (108)
T ss_dssp -CGGGCEEEEEEEC----CEE-EEEEEEEEC--
T ss_pred -CcccCEEEEEEEEeCCCceE-EEEEEEEeCCC
Confidence 99999999999999988777 77888887665
No 358
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.61 E-value=7.6e-16 Score=112.86 Aligned_cols=125 Identities=14% Similarity=0.218 Sum_probs=85.3
Q ss_pred eecCCcEEEEeeeCcc---cCc-eEEEEeCCcccCCCcc---e-----EEecCCeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 124 AIAGEPLYLGCPVAGY---PIE-SITWQKGVQQLPLNRR---Q-----KVFPNGTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 124 ~~~g~~~~l~C~~~~~---~~~-~i~W~~~~~~~~~~~~---~-----~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
+.+|+.++|.|.+.+. |.+ .|.|++++..+..... . .......|.|.++.. +|+|.|+|.+.+..+.
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~-~D~g~Y~C~~~~~~~~ 107 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDW-LNGKTFKCKVNSGAFP 107 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHH-HTTCCEEEEEECSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHc-cCCCeEEEEEecccCC
Confidence 6789999999999876 665 8999998865432110 0 011223688888887 8999999999998763
Q ss_pred Cc-cceEEE--EeecCCccccCCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 192 SS-SQNVHI--SVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 192 ~~-~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
.. ...+.+ .+..+|.+.+.+.......|+.++|.|.+.+.+|. +.|.|++||+.+...
T Consensus 108 ~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 169 (239)
T 1i1c_A 108 APIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENY 169 (239)
T ss_dssp SCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSE
T ss_pred CCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCc
Confidence 21 112222 23445655544433333458899999999654665 589999999998653
No 359
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.61 E-value=1.7e-15 Score=108.89 Aligned_cols=124 Identities=22% Similarity=0.400 Sum_probs=86.0
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC----------------CCcceEEec-----CCeEEEEeccc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP----------------LNRRQKVFP-----NGTLLIENVQK 174 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~----------------~~~~~~~~~-----~~~l~i~~~~~ 174 (258)
....+.+|+++.|.|.+.+.+ .+.+.|+++. .... ...++.+.. ..+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 87 (210)
T 3d9a_H 8 GPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT 87 (210)
T ss_dssp SCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCc
Confidence 445788999999999998754 4799999853 2110 123344332 13799999998
Q ss_pred CCCCcEEEEEEEeCCCCCccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEec
Q psy14532 175 DHDRGVYWCTATNKQGRSSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPI 246 (258)
Q Consensus 175 ~~~~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l 246 (258)
+|+|.|.|.+.+.. .......|.|.. +|.+...+....+..|+.++|.|.+.+..|.+ .+.|+++|..+
T Consensus 88 -~D~G~Y~C~~~~~~--~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~ 161 (210)
T 3d9a_H 88 -EDTATYYCANWDGD--YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 161 (210)
T ss_dssp -GGCEEEEEEETTSS--CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred -ccCEEEEEEEecCc--ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCccc
Confidence 99999999999863 122335566653 33333333234567899999999996455877 99999998864
No 360
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.61 E-value=6.6e-16 Score=98.48 Aligned_cols=92 Identities=20% Similarity=0.418 Sum_probs=73.1
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.+. ....+++|.|.++
T Consensus 14 ~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~---~~~~~~-------------~~~~~~~L~I~~v 77 (106)
T 1nct_A 14 AARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTS---ARHQVT-------------TTKYKSTFEISSV 77 (106)
T ss_dssp CCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTC---SSEEEE-------------ECSSEEEEEECCC
T ss_pred CCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCC---CCEEEE-------------ECCCEEEEEECcC
Confidence 578888999999999999999999999999999999998776543 222111 0012457999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVT 111 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 111 (258)
+..|+|.|+|.+.|..|... ..+.|.|.
T Consensus 78 -~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~ 105 (106)
T 1nct_A 78 -QASDEGNYSVVVENSEGKQE-AEFTLTIQ 105 (106)
T ss_dssp -CSSCCSEEEECCBCSSCBCC-EEEEEEEC
T ss_pred -CchhCEEEEEEEEeCCCeEE-EEEEEEEE
Confidence 99999999999999988766 77777764
No 361
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.4e-15 Score=95.25 Aligned_cols=85 Identities=32% Similarity=0.591 Sum_probs=69.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.+..+.+|++++|.|.+.+.|.+.+.|+|++..+... .+.+|.|.++
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~-------------------------~~~~L~i~~v 64 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP-------------------------PSPVLILPEI 64 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC-------------------------CCSEEEEESC
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC-------------------------CCCEEEECCC
Confidence 577888888899999999999999999888899999998766543 2458999999
Q ss_pred ccCCCceEEEEEEEeCCc-ceeeceEEEEEec
Q psy14532 82 QKDHDRGVYWCTATNKQG-RSSSQNVHISVTG 112 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~ 112 (258)
+..|+|.|+|.+.+..+ ...+..+.|.|..
T Consensus 65 -~~~d~G~Y~C~a~n~~~~~~~s~~~~v~V~~ 95 (96)
T 2ens_A 65 -GPQDQGTYSCVATHSSHGPQESRAVSISIIE 95 (96)
T ss_dssp -CTTTCEEEECEECCSSCCCEECCCEEEEECC
T ss_pred -CcccCEEEEEEEEeCCCCcEEEEEEEEEEeC
Confidence 99999999999999644 3444677777653
No 362
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.61 E-value=3.7e-15 Score=110.47 Aligned_cols=126 Identities=17% Similarity=0.351 Sum_probs=90.6
Q ss_pred CCCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~ 172 (258)
+....+.+|+.++|.|.+.+.+ .+.+.|+++. ..+. ...++.+.. ..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 4456788999999999998764 6799999842 2110 123343332 237999999
Q ss_pred ccCCCCcEEEEEEEeCCCC----CccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCC-----ceeEEEE--
Q psy14532 173 QKDHDRGVYWCTATNKQGR----SSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-----LTISWLK-- 241 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-----~~~~W~~-- 241 (258)
+. +|+|.|.|.+.+..+. .....+.|.|..+|.+...+....+.+|++++|.|.+ .+.|. +.+.|++
T Consensus 87 ~~-~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~ 164 (256)
T 1nqb_A 87 TS-EDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRS-SQSIVHSNGNTYLEWYLQK 164 (256)
T ss_dssp CG-GGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEE-SSCCBCTTSCBCEEEEEEC
T ss_pred Ch-hhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEe-cCcccccccceEEEEEEEC
Confidence 98 9999999999987542 1234567777777665555555678999999999999 46554 3999999
Q ss_pred CCEec
Q psy14532 242 NGLPI 246 (258)
Q Consensus 242 ~g~~l 246 (258)
+|+.+
T Consensus 165 ~g~~~ 169 (256)
T 1nqb_A 165 PGQSP 169 (256)
T ss_dssp TTSCE
T ss_pred CCCCc
Confidence 66544
No 363
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.61 E-value=2.6e-15 Score=94.70 Aligned_cols=92 Identities=23% Similarity=0.429 Sum_probs=69.1
Q ss_pred CCcceeec----eeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEE
Q psy14532 2 HPQLIYKF----IQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLL 77 (258)
Q Consensus 2 ~p~~~~~~----~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (258)
||.+...+ ..+.+.+|+++.|.|.+.+.|.+.+.|++++..+.......... .....++|.
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~---------------~~~~~~~L~ 68 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYK---------------VRNQHWSLI 68 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCE---------------EEGGGTEEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEE---------------EecCeEEEE
Confidence 56665433 46778999999999999999999999999998776442111111 111245799
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEE
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISV 110 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v 110 (258)
|.++ +..|+|.|+|.+.|..|... ..+.|.|
T Consensus 69 i~~v-~~~D~G~Y~C~a~N~~g~~~-~~~~l~V 99 (100)
T 3caf_A 69 MESV-VPSDKGNYTCVVENEYGSIN-HTYHLDV 99 (100)
T ss_dssp ECSC-CGGGCEEEEEEEEETTEEEE-EEEEEEE
T ss_pred EccC-CcCCCEEEEEEEEeCCCEEE-EEEEEEE
Confidence 9999 99999999999999988766 6666665
No 364
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.61 E-value=7e-15 Score=102.98 Aligned_cols=119 Identities=22% Similarity=0.290 Sum_probs=86.0
Q ss_pred CCcceecCCcEEEEeeeCc-ccCceEEEEeC-Cccc--------------CCCcceEE-ecCCeEEEEecccCCCCcEEE
Q psy14532 120 GNVSAIAGEPLYLGCPVAG-YPIESITWQKG-VQQL--------------PLNRRQKV-FPNGTLLIENVQKDHDRGVYW 182 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~-~~~~~i~W~~~-~~~~--------------~~~~~~~~-~~~~~l~i~~~~~~~~~g~y~ 182 (258)
..+.+.+|++++|.|.+.+ .+.+.|.|+++ +..+ ....+..+ ..+++|.|.+++. +|+|.|+
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~-~D~G~Y~ 85 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSK-EDRGDYY 85 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCG-GGCEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCH-HHCeEEE
Confidence 4467889999999999854 34679999994 2211 11134555 4667899999998 9999999
Q ss_pred EEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecc
Q psy14532 183 CTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPIL 247 (258)
Q Consensus 183 C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~ 247 (258)
|.+.+.. .....+.|.|..++..+... ..+..++|.|.+..+ |.+.|.|+++|..+.
T Consensus 86 C~v~~~~--~~~~~~~L~V~~~~~~P~i~-----~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~ 142 (180)
T 2dru_A 86 MRMLHET--EDQWKITMEVYEMVSKPMIY-----WECSNATLTCEVLEG-TDVELKLYQGKEHLR 142 (180)
T ss_dssp EEEESSS--EEEEEEEEEEECCCCCCEEE-----EEGGGTEEEEECSSC-TTCEEEEEETTEEEE
T ss_pred EEEEcCC--eEEEEEEEEEECCCCCCEEE-----ecCCCEEEEEEeCCC-CCCEEEEEECCeECc
Confidence 9998764 34566778887653322111 134679999999556 889999999999886
No 365
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.61 E-value=3.7e-15 Score=108.00 Aligned_cols=124 Identities=25% Similarity=0.489 Sum_probs=86.2
Q ss_pred CcceecCCcEEEEeeeCcccC-----ceEEEEeCCccc-------------CCCcceEEec------CCeEEEEecccCC
Q psy14532 121 NVSAIAGEPLYLGCPVAGYPI-----ESITWQKGVQQL-------------PLNRRQKVFP------NGTLLIENVQKDH 176 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~~~~~~-----~~i~W~~~~~~~-------------~~~~~~~~~~------~~~l~i~~~~~~~ 176 (258)
.+.+.+|+.+.|.|.+.+.+. +.+.|++++... ....+..+.. +..|.|.+++. +
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~-~ 82 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRV-T 82 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCG-G
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccc-c
Confidence 456789999999999887653 689999976543 1122333322 56799999998 9
Q ss_pred CCcEEEEEEEeCCCCCccceEEEEeecC---CccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEE-CCEeccc
Q psy14532 177 DRGVYWCTATNKQGRSSSQNVHISVTVP---PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLK-NGLPILS 248 (258)
Q Consensus 177 ~~g~y~C~~~~~~~~~~~~~~~l~v~~~---p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~l~~ 248 (258)
|+|.|+|.+.+.. ..+..+.|.|..+ |.+...+ ...+..|+.+.|.|.+..+.|.+.+.|++ ++..+..
T Consensus 83 D~G~Y~C~~~~~~--~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~ 155 (222)
T 4i0k_A 83 DEGSYTCFVSIQD--FDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTG 155 (222)
T ss_dssp GCSCEEEEEEECC--CCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCS
T ss_pred cCEEEEEEEEeCC--CceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCC
Confidence 9999999999863 2344556666654 3333222 33577899999999996688999999999 5666554
No 366
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=2.8e-15 Score=97.27 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=70.5
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec---CCCeEEEeeCCEeCcCCc-cccceecccceeeccccccceeeeeCCcEEE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN---PTPHISWKLDGYPLAGDR-HENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~---~~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
|.|...|.++.+.+|++++|.|.+.+. |.|.|.|||+.. +.... ...++.+.. .+.. .....+.+|.|
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~-~~~~~~~~~~~~~~~------~~~~-~~~~~~~~L~I 79 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKW-MDLASKAGKHLQLKE------TFER-HSRVYTFEMQI 79 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSS-CCHHHHTTSSEEEEE------EEET-TTTEEEEEEEE
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcC-cccCCCCCceEEEcc------cccc-ccccceEEEEE
Confidence 457888999999999999999999864 789999999742 11000 001111110 0000 00112468999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEec
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
.++ +..|+|.|+|.+.+..+... ..+.|.|..
T Consensus 80 ~~v-~~~DaG~Y~Cevsn~~g~~~-~~~~L~V~~ 111 (126)
T 2dav_A 80 IKA-KDNFAGNYRCEVTYKDKFDS-CSFDLEVHE 111 (126)
T ss_dssp CSC-CTTSCEEEEEEEECSSCEEE-ECCEEEEEC
T ss_pred ccC-CcccCEEEEEEEEeCCCcEE-EEEEEEEEe
Confidence 999 99999999999999987766 888999987
No 367
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.60 E-value=4.7e-15 Score=107.55 Aligned_cols=127 Identities=20% Similarity=0.362 Sum_probs=86.8
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-------------------CCcceEEec-----CCeEEEEe
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-------------------LNRRQKVFP-----NGTLLIEN 171 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-------------------~~~~~~~~~-----~~~l~i~~ 171 (258)
....+.+|+.++|.|.+.+.+ .+.+.|+++. .... ...++.+.. +.+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 8 GGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 345688999999999998754 6789999853 2110 123343332 23799999
Q ss_pred cccCCCCcEEEEEEEeCCCC----CccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEEC
Q psy14532 172 VQKDHDRGVYWCTATNKQGR----SSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKN 242 (258)
Q Consensus 172 ~~~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~ 242 (258)
++. +|+|.|.|.+.+..+. .......|.|.. +|.+...+....+..|+.++|.|.+.+..|.+ .|.|+++
T Consensus 88 v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 166 (222)
T 1q9r_B 88 LRA-EDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 166 (222)
T ss_dssp CCG-GGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CCc-ccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecC
Confidence 998 9999999999986531 122345666654 23333222233456899999999996445877 9999999
Q ss_pred CEecc
Q psy14532 243 GLPIL 247 (258)
Q Consensus 243 g~~l~ 247 (258)
|+.+.
T Consensus 167 g~~~~ 171 (222)
T 1q9r_B 167 SLSSG 171 (222)
T ss_dssp TBCTT
T ss_pred CeEcc
Confidence 98764
No 368
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.60 E-value=6.8e-15 Score=121.62 Aligned_cols=129 Identities=26% Similarity=0.526 Sum_probs=97.3
Q ss_pred CcceecCCcEEEEeee-CcccCceEEEEeCCcccC------------CCcceEEecCCeEEEEecccCCCCcEEEEEEEe
Q psy14532 121 NVSAIAGEPLYLGCPV-AGYPIESITWQKGVQQLP------------LNRRQKVFPNGTLLIENVQKDHDRGVYWCTATN 187 (258)
Q Consensus 121 ~~~~~~g~~~~l~C~~-~~~~~~~i~W~~~~~~~~------------~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~ 187 (258)
...+..|++++|.|.+ .+.|.+.+.|++++..+. ...+..+..+++|.|.+++. +|+|.|+|.+.+
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~-~D~G~Y~C~~~n 453 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGI-QDEGIFRCQAMN 453 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCG-GGCEEEEEEEEC
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEecccc-ccCeEEEEEEEc
Confidence 3567889999999999 778889999999876321 13345566778899999998 999999999999
Q ss_pred CCCCCccceEEEEeecCCccccC-CCCCccCCCCee-eEEEEeccCCCCceeEEEECCEeccccc
Q psy14532 188 KQGRSSSQNVHISVTVPPKIAPF-EFQPDLHSGDRA-GVQCLVTKGDPPLTISWLKNGLPILSAM 250 (258)
Q Consensus 188 ~~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~g~~~-~l~C~~~~~~p~~~~~W~~~g~~l~~~~ 250 (258)
..+......+.|.|..+|..+.. .....+..|+.. .|.|.+..++|.+.|.|++||+.|....
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~ 518 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNE 518 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTS
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCC
Confidence 88754466788888876653322 223335555554 6699996557999999999999997543
No 369
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.60 E-value=4.5e-15 Score=107.45 Aligned_cols=129 Identities=19% Similarity=0.293 Sum_probs=93.0
Q ss_pred CCcceecCCcEEEEeeeCcccCc---eEEEEeCCcccCC----------------CcceEE----------ecCCeEEEE
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPIE---SITWQKGVQQLPL----------------NRRQKV----------FPNGTLLIE 170 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~---~i~W~~~~~~~~~----------------~~~~~~----------~~~~~l~i~ 170 (258)
+.+.+..|++++|.|.+.+.+.+ .|.|+|++..... ..+... ..+++|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 44667899999999999876654 4899997643210 001111 123569999
Q ss_pred ecccCCCCcEEEEEEEeCCCCCccceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 171 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 171 ~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
+++. +|+|.|+|.+.+..+........+.+..+|.....+.......++.+.+.|.+..+.|++.+.|++++..+...
T Consensus 89 ~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~ 166 (225)
T 4fmk_A 89 GLRV-EDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKD 166 (225)
T ss_dssp SCCG-GGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEE
T ss_pred cCCH-HHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCC
Confidence 9998 99999999999877655555556667667666555555566778888888888778899999999987665443
No 370
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.60 E-value=3.7e-15 Score=109.35 Aligned_cols=120 Identities=14% Similarity=0.185 Sum_probs=86.9
Q ss_pred ceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc--ceEEecCCeEEEEecccCCCCcEEEEEEEeCCC-CCccceEEE
Q psy14532 123 SAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR--RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQG-RSSSQNVHI 199 (258)
Q Consensus 123 ~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~-~~~~~~~~l 199 (258)
.+.+|++++|.|.+.+ +...+.|+|++..+.... ......++.|.|.+++. +|+|.|+|.+.+..+ ...+..+.|
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~~~~~~s~~S~~~~L 94 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNS-RMAGQYSCIYRVGELWSEPSNLLDL 94 (242)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCG-GGCEEEEEEEEETTEECCCCCCEEE
T ss_pred ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCc-ccCeEEEEEEecCCccccCCcceEE
Confidence 7889999999999875 456899999987653110 00112345799999997 999999999987643 234567778
Q ss_pred Eeec---CCccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEECCEecc
Q psy14532 200 SVTV---PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLKNGLPIL 247 (258)
Q Consensus 200 ~v~~---~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~ 247 (258)
.|.. +|.+...+ ...+.+|+.++|.|.+. +. .+.|.|+|+|..+.
T Consensus 95 ~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~-~~-~~~~~w~k~g~~~~ 142 (242)
T 1p6f_A 95 VVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLD-TA-TSMFLLLKEGRSSH 142 (242)
T ss_dssp EEECCSCCCEEEEES-CSEEETTCEEEEEEECT-TS-CSEEEEEECSSSCE
T ss_pred EeecccCCCceEccC-CCccCCCCcEEEEEecC-CC-CCEEEEEECCCccC
Confidence 7764 44444333 34678999999999994 43 46999999998765
No 371
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.60 E-value=4.3e-15 Score=109.40 Aligned_cols=131 Identities=23% Similarity=0.383 Sum_probs=88.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--ccc--------------CCCcceEEec----CCeEEEEecccCCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQL--------------PLNRRQKVFP----NGTLLIENVQKDHDR 178 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~--------------~~~~~~~~~~----~~~l~i~~~~~~~~~ 178 (258)
+..+.+.+|+.+.|.|.+.+.+.+.+.|++.. ... ....++.+.. +.+|.|.+++. +|+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~-~D~ 86 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL-SDS 86 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG-GGC
T ss_pred CceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh-hhC
Confidence 34567889999999999988888999999832 110 0112222221 23699999998 999
Q ss_pred cEEEEEEEeCC-----CCCccceEEEEeec------CCccccCC-CCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEe
Q psy14532 179 GVYWCTATNKQ-----GRSSSQNVHISVTV------PPKIAPFE-FQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLP 245 (258)
Q Consensus 179 g~y~C~~~~~~-----~~~~~~~~~l~v~~------~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~ 245 (258)
|.|.|.+.+.. .........|.|.. +|.+.... ....+..|+.++|.|.+.+.+|++ .+.|+++|+.
T Consensus 87 G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~ 166 (245)
T 3nfj_J 87 GFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKE 166 (245)
T ss_dssp EEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred EEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEE
Confidence 99999999832 21223445666665 34333222 122345599999999996445554 8999999999
Q ss_pred ccccc
Q psy14532 246 ILSAM 250 (258)
Q Consensus 246 l~~~~ 250 (258)
+..+.
T Consensus 167 l~~~~ 171 (245)
T 3nfj_J 167 VHSGV 171 (245)
T ss_dssp ECTTE
T ss_pred CCCCc
Confidence 97643
No 372
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.60 E-value=2.9e-15 Score=110.38 Aligned_cols=131 Identities=19% Similarity=0.359 Sum_probs=88.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeC----------------CcccCC---CcceEEec----CCeEEEEecccC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKG----------------VQQLPL---NRRQKVFP----NGTLLIENVQKD 175 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~----------------~~~~~~---~~~~~~~~----~~~l~i~~~~~~ 175 (258)
+..+.+.+|+.+.|.|.+.+.+.+.+.|++. +..... ..++.+.. ..+|.|.+++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~- 86 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHP- 86 (246)
T ss_dssp CSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCG-
T ss_pred CcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCH-
Confidence 3456788999999999998888889999982 111111 12333322 23699999998
Q ss_pred CCCcEEEEEEEeCCC---CCccceEEEEeec------CCccccC-CCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCE
Q psy14532 176 HDRGVYWCTATNKQG---RSSSQNVHISVTV------PPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGL 244 (258)
Q Consensus 176 ~~~g~y~C~~~~~~~---~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~ 244 (258)
+|+|.|.|.+.+..+ ........|.|.. +|.+... +....+..|+.++|.|.+.+.+|++ .+.|+++|+
T Consensus 87 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 166 (246)
T 4dzb_B 87 EDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 166 (246)
T ss_dssp GGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred HHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCE
Confidence 999999999987532 1122445566654 3333222 2223355699999999995445443 899999999
Q ss_pred eccccc
Q psy14532 245 PILSAM 250 (258)
Q Consensus 245 ~l~~~~ 250 (258)
.|..+.
T Consensus 167 ~l~~~~ 172 (246)
T 4dzb_B 167 EVHSGV 172 (246)
T ss_dssp EECTTE
T ss_pred ECCCCc
Confidence 997643
No 373
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.60 E-value=7.9e-15 Score=108.78 Aligned_cols=125 Identities=22% Similarity=0.324 Sum_probs=87.1
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC----------------CCcceEEec-----CCeEEEEeccc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP----------------LNRRQKVFP-----NGTLLIENVQK 174 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~----------------~~~~~~~~~-----~~~l~i~~~~~ 174 (258)
....+.+|+.++|.|.+.+.| .+.+.|+++. ..+. ...++.+.. ..+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 345688999999999998864 6799999852 2111 123444432 23799999997
Q ss_pred CCCCcEEEEEEEeCCC-------C-CccceEEEEeecCC---------------ccccCCCCCccCCCCeeeEEEEeccC
Q psy14532 175 DHDRGVYWCTATNKQG-------R-SSSQNVHISVTVPP---------------KIAPFEFQPDLHSGDRAGVQCLVTKG 231 (258)
Q Consensus 175 ~~~~g~y~C~~~~~~~-------~-~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~ 231 (258)
+|+|.|+|.+.+..+ . .......|.|..++ .+...+....+.+|++++|.|.+ .+
T Consensus 88 -~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~ 165 (257)
T 1f3r_B 88 -DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKG-SQ 165 (257)
T ss_dssp -TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEEC-SS
T ss_pred -ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEE-CC
Confidence 999999999998743 1 11234567776643 12222334568899999999999 57
Q ss_pred CCCceeEEEE--CCEec
Q psy14532 232 DPPLTISWLK--NGLPI 246 (258)
Q Consensus 232 ~p~~~~~W~~--~g~~l 246 (258)
.|.+.+.|++ +|..+
T Consensus 166 ~~~~~v~W~k~~~g~~~ 182 (257)
T 1f3r_B 166 NINNYLAWYQQKLGEAP 182 (257)
T ss_dssp CCBTCEEEEEECTTSCC
T ss_pred cCCCcEEEEEECCCCCc
Confidence 7778999999 66544
No 374
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.59 E-value=4.4e-15 Score=108.35 Aligned_cols=127 Identities=21% Similarity=0.285 Sum_probs=85.3
Q ss_pred CCcceecCCcEEEEeeeCcc-cC-c-eEEEEeCCccc-CCCcceE-EecCC------eEEEEecccCCCCcEEEEEEEeC
Q psy14532 120 GNVSAIAGEPLYLGCPVAGY-PI-E-SITWQKGVQQL-PLNRRQK-VFPNG------TLLIENVQKDHDRGVYWCTATNK 188 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~-~~-~-~i~W~~~~~~~-~~~~~~~-~~~~~------~l~i~~~~~~~~~g~y~C~~~~~ 188 (258)
....+..|+.++|.|.+.+. |. + .+.|++++..+ ....... ...++ .|.|.++.. +|.|.|+|.+.+.
T Consensus 21 ~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~-~D~g~Y~C~~~~~ 99 (231)
T 2w59_A 21 SPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDW-LSGERFTCTVQHE 99 (231)
T ss_dssp CHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHH-HTTCCEEEEEECT
T ss_pred ChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhc-cCCCEEEEEEEcC
Confidence 33456789999999999884 63 4 99999988776 3222111 11222 588888887 8999999999997
Q ss_pred CCCCccceEEEEee------cCCccccCCCCCccCCCCeeeEEEEeccCCC-CceeEEEECCEeccccc
Q psy14532 189 QGRSSSQNVHISVT------VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP-PLTISWLKNGLPILSAM 250 (258)
Q Consensus 189 ~~~~~~~~~~l~v~------~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~l~~~~ 250 (258)
.+. ..+.+.+. .+|.+.+.+.......|+.++|.|.+.+.+| .+.|.|++||+.+..+.
T Consensus 100 ~~~---~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~ 165 (231)
T 2w59_A 100 ELP---LPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATE 165 (231)
T ss_dssp TCS---SCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGG
T ss_pred CCC---CceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcc
Confidence 642 33344443 3444433322212223567999999965456 47999999999997654
No 375
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.59 E-value=1.1e-14 Score=99.42 Aligned_cols=99 Identities=21% Similarity=0.352 Sum_probs=75.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+... .++.+.. ......+|.|.++
T Consensus 41 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~---~~~~~~~------------~~~~~~~L~I~~v 105 (154)
T 1fhg_A 41 KPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES---RHFQIDY------------DEEGNCSLTISEV 105 (154)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCS---SSEEEEE------------CTTCEEEEEESSC
T ss_pred CCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCC---CcEEEEE------------CCCCeEEEEECCC
Confidence 577888888899999999999999999999999999999887644 1211110 0001247999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCeec
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVR 117 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~ 117 (258)
+..|+|.|+|.+.|..|... ..+.|.|..++...
T Consensus 106 -~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 106 -CGDDDAKYTCKAVNSLGEAT-CTAELLVETMGKEG 139 (154)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEEEEECC----
T ss_pred -ChhcCEEEEEEEEECCCeEE-EEEEEEEeCcCcCC
Confidence 99999999999999998866 78888888776443
No 376
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=2.6e-15 Score=96.31 Aligned_cols=101 Identities=20% Similarity=0.220 Sum_probs=70.9
Q ss_pred CcceeeceeeeecCCCceEEEEEEeec---CCCeEEEeeCCE-eCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGN---PTPHISWKLDGY-PLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~---~~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+.|...|.++.+.+|++++|.|.+.+. |.|.|.|||+.. .+... ...++.+.. .+. +.....+.+|.|
T Consensus 13 ~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~-~~~~~~~~~------~~~-~~~~~~~~~L~I 84 (118)
T 2edn_A 13 GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSK-SGARFSFKE------SHN-SASNVYTVELHI 84 (118)
T ss_dssp SSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCS-TTSSCEEEE------EEC-SSSCEEEEEEEE
T ss_pred ceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCC-CccEEEecc------ccc-cccccceEEEEE
Confidence 456778899999999999999999874 788999999742 11111 011111110 000 011123568999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecC
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA 113 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~ 113 (258)
.++ ...|+|.|+|.+.+..+... ..+.|.|..+
T Consensus 85 ~~v-~~~D~G~Y~Cevsn~~g~~s-~~~~L~V~~~ 117 (118)
T 2edn_A 85 GKV-VLGDRGYYRLEVKAKDTCDS-CGFNIDVEAP 117 (118)
T ss_dssp SSC-CTTTCSCEEEEEECSSCEEE-EEECCEEECC
T ss_pred eeC-ChhhCEEEEEEEEEcCCcEE-EEEEEEEEcC
Confidence 999 99999999999999998766 8888888754
No 377
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.59 E-value=3.6e-15 Score=108.52 Aligned_cols=126 Identities=22% Similarity=0.366 Sum_probs=81.6
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~~ 173 (258)
....+.+|++++|.|.+.+.+ .+.+.|+++. .... ...++.+.. +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (227)
T 1mju_H 8 GAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLT 87 (227)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCC
Confidence 446688999999999998765 6789999854 2211 122333322 2479999999
Q ss_pred cCCCCcEEEEEEEeCCCCCccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEec
Q psy14532 174 KDHDRGVYWCTATNKQGRSSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPI 246 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l 246 (258)
. +|+|.|.|.+.+...........|.|.. +|.+........+..|+.++|.|.+.+.+|.+ .|.|+++|..+
T Consensus 88 ~-~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 88 S-DDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp G-GGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred c-ccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 8 9999999999986321122345677764 23332222223456899999999996445766 99999998875
No 378
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.59 E-value=3.1e-14 Score=89.20 Aligned_cols=89 Identities=20% Similarity=0.427 Sum_probs=70.1
Q ss_pred cceeeceeeeecCCCceEEEEEEeec-CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC--cEEEee
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGN-PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG--TLLIEN 80 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~ 80 (258)
.+...+.++.+.+|++++|.|.+.+. |.+.+.|++++..+... .++.+. ..++ +|.|.+
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~---~~~~~~---------------~~~~~~~L~i~~ 64 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENS---EKYEIT---------------YEDGVAILYVKD 64 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSS---SSEEEE---------------EETTEEEEEECS
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCC---CCEEEE---------------EcCCeEEEEEec
Confidence 34556778899999999999999996 88999999999877543 222111 1233 799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEec
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
+ +..|+|.|+|.+.|..|... ..+.|.|..
T Consensus 65 v-~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~ 94 (97)
T 2bk8_A 65 I-TKLDDGTYRCKVVNDYGEDS-SYAELFVKG 94 (97)
T ss_dssp C-CGGGCEEEEEEEECSSCEEE-EEEEEEETT
T ss_pred C-ChhhCeEEEEEEECCCCeEe-EEEEEEEEe
Confidence 9 99999999999999988776 677777754
No 379
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.58 E-value=1.3e-14 Score=107.19 Aligned_cols=122 Identities=16% Similarity=0.248 Sum_probs=84.3
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCccc--------------CCCcceEEec---CCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQL--------------PLNRRQKVFP---NGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~--------------~~~~~~~~~~---~~~l~i~~~~~~~~~g~y 181 (258)
+..+.+.+|+.++|.|.+.+.+.+.+.|+++.... ....++.... ..+|.|.++.. +|+|.|
T Consensus 11 p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 89 (250)
T 3esu_F 11 TSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ-EDIGTY 89 (250)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEE
T ss_pred CCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh-hhCEEE
Confidence 44566889999999999999888899999853110 0112232222 12699999997 999999
Q ss_pred EEEEEeCCCCCccceEEEEeecCC-------------------ccccCCCCCccCCCCeeeEEEEeccCCC--CceeEEE
Q psy14532 182 WCTATNKQGRSSSQNVHISVTVPP-------------------KIAPFEFQPDLHSGDRAGVQCLVTKGDP--PLTISWL 240 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v~~~p-------------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~ 240 (258)
.|.+.+..+........|.|..++ .....+....+.+|+.++|.|.+ .+.| .+.+.|+
T Consensus 90 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~ 168 (250)
T 3esu_F 90 FCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKD-SGYAFSSSWMNWV 168 (250)
T ss_dssp EEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEEC-CSTTGGGSEEEEE
T ss_pred EEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEe-cCCcccCCEEEEE
Confidence 999998755333444566665531 12222344568899999999999 4655 6899999
Q ss_pred EC
Q psy14532 241 KN 242 (258)
Q Consensus 241 ~~ 242 (258)
++
T Consensus 169 k~ 170 (250)
T 3esu_F 169 KQ 170 (250)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 380
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.58 E-value=4.6e-15 Score=89.92 Aligned_cols=82 Identities=23% Similarity=0.407 Sum_probs=60.2
Q ss_pred eceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCc
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDR 87 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 87 (258)
++.++.+.+|+++.|.|.+.+ |.+.+.|+|+|..+... .++.+.. .....+|.|.++ +.+|+
T Consensus 2 ~lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~---~~~~~~~-------------~~~~~~L~I~~~-~~~D~ 63 (84)
T 2lu7_A 2 HMTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQ---GRVQLEQ-------------AGARQVLRVQGA-RSGDA 63 (84)
T ss_dssp -CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCC---SSEEEEE-------------CSSCEEEEESSC-SSTTC
T ss_pred CCeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEcccc---ccEEEee-------------cCCeEEEEecCC-CCccc
Confidence 356788999999999999866 78899999999988755 2222210 011346999999 99999
Q ss_pred eEEEEEEEeCCcceeeceEEEEEec
Q psy14532 88 GVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 88 G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
|.|+|.+.+. . ..+.|.|..
T Consensus 64 G~Y~C~a~n~----~-~~a~l~V~e 83 (84)
T 2lu7_A 64 GEYLCDAPQD----S-RIFLVSVEE 83 (84)
T ss_dssp EEEEEECTTT----C-EEEEEEECC
T ss_pred EEEEEEECCE----E-EEEEEEEEC
Confidence 9999988443 2 566777764
No 381
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.58 E-value=1.4e-14 Score=94.14 Aligned_cols=98 Identities=29% Similarity=0.596 Sum_probs=72.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE---
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI--- 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i--- 78 (258)
||.|...+.+..+.+|++++|.|.+.+.|.+.+.|+|++..+......... ......++.+.+
T Consensus 9 pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~i 74 (117)
T 2v9t_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRS--------------HRMLLPSGSLFFLRI 74 (117)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSC--------------SEEECTTSCEEESSC
T ss_pred CCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcc--------------eeEEecCCcEEEEEE
Confidence 688888888999999999999999999999999999999887644211110 001112344443
Q ss_pred --eecccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 79 --ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 79 --~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
.++ +..|+|.|+|.+.|..|...+..+.|.+..+.
T Consensus 75 ~~~~v-~~~D~G~Y~C~a~N~~G~~~s~~~~l~~~~~~ 111 (117)
T 2v9t_A 75 VHGRK-SRPDEGVYVCVARNYLGEAVSHDASLEVAAAA 111 (117)
T ss_dssp CCBTT-BCSSCEEEEEEEEETTEEEECCCEEEEEC---
T ss_pred EeCCC-CcCcCEEEEEEEEeCccceEeeeEEEEhhhhh
Confidence 356 78999999999999999888788888887653
No 382
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=3.2e-14 Score=91.94 Aligned_cols=91 Identities=25% Similarity=0.223 Sum_probs=74.2
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEec---CCeEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFP---NGTLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+.. ...|.|.++.. +|+|.|+|.+.|..+ ..+
T Consensus 13 ~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~g-~~~ 90 (114)
T 2cqv_A 13 FPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQ-EHCGCYTLLVENKLG-SRQ 90 (114)
T ss_dssp CCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCT-TTCEEEEEEEECSSC-EEE
T ss_pred CCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCCh-hcCEEEEEEEEECCC-cEE
Confidence 3556788999999999999999999999999998887666655543 34799999997 999999999999988 455
Q ss_pred ceEEEEeecCCccccC
Q psy14532 195 QNVHISVTVPPKIAPF 210 (258)
Q Consensus 195 ~~~~l~v~~~p~~~~~ 210 (258)
..+.|.|...|..+..
T Consensus 91 ~~~~l~V~~~p~~P~~ 106 (114)
T 2cqv_A 91 AQVNLTVVDKPDPPAG 106 (114)
T ss_dssp CCEEEEEECSCSCCCC
T ss_pred EEEEEEEECCCCCCCC
Confidence 6788888877764433
No 383
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.57 E-value=1.3e-14 Score=105.11 Aligned_cols=125 Identities=24% Similarity=0.453 Sum_probs=87.1
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEecC-----CeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFPN-----GTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~-----~~l~i~~~~ 173 (258)
....+.+|+.++|.|.+.+.+ .+.+.|++.. .... ...++.+..+ .+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 446788999999999997754 5789999853 2110 1234444322 379999999
Q ss_pred cCCCCcEEEEEEEeCCCC--CccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCC--ceeEEEECCEe
Q psy14532 174 KDHDRGVYWCTATNKQGR--SSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP--LTISWLKNGLP 245 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~~~W~~~g~~ 245 (258)
. +|+|.|.|.+.+..+. .......|.|.. +|.+...+ ...+..|+.++|.|.+.+.+|. +.|.|+++|..
T Consensus 88 ~-~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~ 165 (220)
T 2fbj_H 88 S-EDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKD 165 (220)
T ss_dssp G-GGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSS
T ss_pred h-hhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEe
Confidence 8 9999999999986432 122345677764 23333333 3446789999999999655576 79999999987
Q ss_pred c
Q psy14532 246 I 246 (258)
Q Consensus 246 l 246 (258)
+
T Consensus 166 ~ 166 (220)
T 2fbj_H 166 I 166 (220)
T ss_dssp C
T ss_pred c
Confidence 6
No 384
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.57 E-value=2.2e-14 Score=91.61 Aligned_cols=107 Identities=18% Similarity=0.164 Sum_probs=74.0
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceeccc-ceeeccccccceeeeeCCcEEEeeccc
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGE-ARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
+...+.+..+.+|++|.|.|.........+.|+|+....... ....+..+. .......+..|..+..+++|.|.++ +
T Consensus 3 l~i~~~p~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~-~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nv-t 80 (111)
T 2qsq_A 3 LTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNR-QIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNI-I 80 (111)
T ss_dssp CEEEEESSEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGG-EEEEEETTTTEEEECTTCCSCEEECTTSCEEECSC-C
T ss_pred cEEEeccceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCc-EEEEEECCCcceecCcccCCcEEEecCCcEEEccC-c
Confidence 455666678999999999998533334479999975322110 111222221 1233344678888889999999999 9
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEecC
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTGA 113 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~ 113 (258)
.+|+|.|+|.+.+..+......+.|.|..+
T Consensus 81 ~~D~G~Ytc~v~~~~~~~~~~~~~L~V~~~ 110 (111)
T 2qsq_A 81 QNDAGFYTLHVIKSDLVNEEATGQFRVYPE 110 (111)
T ss_dssp GGGCEEEEEEEEETTSCCEEEEEEEEEECC
T ss_pred ccCCeEEEEEEEeCCCcEEEEEEEEEEecC
Confidence 999999999999987654447788887643
No 385
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.57 E-value=1.1e-14 Score=105.92 Aligned_cols=126 Identities=24% Similarity=0.420 Sum_probs=86.3
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~~ 173 (258)
....+.+|++++|.|.+.+.+ .+.+.|+++. .... ...++.+.. ..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 346788999999999998765 6789999853 2110 123344332 2479999999
Q ss_pred cCCCCcEEEEEEEeCCC-----C--CccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEE
Q psy14532 174 KDHDRGVYWCTATNKQG-----R--SSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLK 241 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~-----~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~ 241 (258)
. +|+|.|.|.+.+..+ . .....+.|.|.. +|.+........+..|+.++|.|.+.+.+|.+ .|.|++
T Consensus 88 ~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 166 (225)
T 1op3_H 88 V-EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 166 (225)
T ss_dssp G-GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCT
T ss_pred h-hhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEec
Confidence 8 999999999998753 1 112345677765 23332222222456899999999996455776 999999
Q ss_pred CCEec
Q psy14532 242 NGLPI 246 (258)
Q Consensus 242 ~g~~l 246 (258)
+|..+
T Consensus 167 ~~~~~ 171 (225)
T 1op3_H 167 GALTS 171 (225)
T ss_dssp TSCCT
T ss_pred CCCcC
Confidence 98764
No 386
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=1.8e-14 Score=105.68 Aligned_cols=122 Identities=16% Similarity=0.269 Sum_probs=86.2
Q ss_pred CCCcceecCCcEEEEeeeCccc----CceEEEEeCC--cccC------------CCcceEEecC---CeEEEEecccCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP----IESITWQKGV--QQLP------------LNRRQKVFPN---GTLLIENVQKDHD 177 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~----~~~i~W~~~~--~~~~------------~~~~~~~~~~---~~l~i~~~~~~~~ 177 (258)
+....+.+|+.++|.|.+.+.+ .+.+.|+++. .... ...++.+... .+|.|.++.. +|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D 86 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEA-DD 86 (240)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GG
T ss_pred CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCCh-hh
Confidence 4456788999999999998877 7799999953 2111 1123333221 2699999997 99
Q ss_pred CcEEEEEEEeCCCCCccceEEEEeecCCc-----c-ccCCCCCccCCCCeeeEEEEeccCCC--CceeEEEEC
Q psy14532 178 RGVYWCTATNKQGRSSSQNVHISVTVPPK-----I-APFEFQPDLHSGDRAGVQCLVTKGDP--PLTISWLKN 242 (258)
Q Consensus 178 ~g~y~C~~~~~~~~~~~~~~~l~v~~~p~-----~-~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~ 242 (258)
+|.|+|.+.+..+........|.|..++. + ...+....+.+|+.++|.|.+. +.| .+.+.|+++
T Consensus 87 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 87 VATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTAS-GFNIKDTYMHWVKQ 158 (240)
T ss_dssp CEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEE-SSCGGGSCEEEEEE
T ss_pred CEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEc-CccCCCCEEEEEEE
Confidence 99999999987654344556777766432 1 1224455788999999999994 655 468999995
No 387
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.57 E-value=3.3e-15 Score=92.02 Aligned_cols=78 Identities=15% Similarity=0.247 Sum_probs=56.6
Q ss_pred CCcceeeceee--eecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQ--TLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~--~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
||.|..++.+. .+.+|++++|.|.+.+ |.+.+.|+|+|..+... .++.+.. .....+|.|.
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~---~~~~i~~-------------~~~~~~L~I~ 66 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEES---DFVVLEN-------------EGPHRRLVLP 66 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCC---SSCEEEE-------------ETTEEEEEES
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeee---eeeeEEe-------------cCCeEEEEeC
Confidence 66676665554 4568999999999865 77899999999888654 2222210 0012369999
Q ss_pred ecccCCCceEEEEEEEeC
Q psy14532 80 NVQKDHDRGVYWCTATNK 97 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~ 97 (258)
++ ..+|+|.|+|.+.|.
T Consensus 67 ~v-~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 67 AT-QPSDGGEFQCVAGDE 83 (91)
T ss_dssp SC-CGGGCSEEEEECSSC
T ss_pred CC-ChhhcEEEEEEEcce
Confidence 99 999999999998654
No 388
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.57 E-value=2.5e-14 Score=104.76 Aligned_cols=122 Identities=16% Similarity=0.260 Sum_probs=84.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--ccc---------------CCCcceEEec----CCeEEEEecccCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQL---------------PLNRRQKVFP----NGTLLIENVQKDHD 177 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~---------------~~~~~~~~~~----~~~l~i~~~~~~~~ 177 (258)
+..+.+.+|+.++|.|. .+.+.+.+.|+++. ... ....++.+.. ..+|.|.+++. +|
T Consensus 7 p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~-~D 84 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATP-SQ 84 (238)
T ss_dssp CSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCG-GG
T ss_pred ccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCc-cc
Confidence 44567889999999999 66788899999952 110 1122333322 34799999998 99
Q ss_pred CcEEEEEEEeCCCCC----ccceEEEEeecCC------------ccccCCCCCccCCCCeeeEEEEeccCCCCceeEEEE
Q psy14532 178 RGVYWCTATNKQGRS----SSQNVHISVTVPP------------KIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTISWLK 241 (258)
Q Consensus 178 ~g~y~C~~~~~~~~~----~~~~~~l~v~~~p------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 241 (258)
+|.|.|.+.+..+.. ......|.|...+ .+...+....+.+|+.++|.|.+ .+.|.+.+.|++
T Consensus 85 sG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~~p~~~i~W~k 163 (238)
T 2p1y_A 85 TSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSY-ENSAFDYFPWYQ 163 (238)
T ss_dssp CEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEEC-CCTTCCEEEEEE
T ss_pred CeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEE-ecCCCCcEEEEE
Confidence 999999999875421 1234566666544 23333445568899999999999 577889999999
Q ss_pred CC
Q psy14532 242 NG 243 (258)
Q Consensus 242 ~g 243 (258)
++
T Consensus 164 ~~ 165 (238)
T 2p1y_A 164 QF 165 (238)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 389
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.57 E-value=1.4e-14 Score=106.63 Aligned_cols=130 Identities=23% Similarity=0.300 Sum_probs=86.8
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeC--Cc------------ccC---CC-cceEEec----CCeEEEEecccCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKG--VQ------------QLP---LN-RRQKVFP----NGTLLIENVQKDH 176 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~--~~------------~~~---~~-~~~~~~~----~~~l~i~~~~~~~ 176 (258)
+..+.+.+|+.++|.| ..+.+.+.+.|++. +. ... .. .++.+.. +.+|.|.+++. +
T Consensus 9 p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~-~ 86 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTAL-E 86 (245)
T ss_dssp CSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCG-G
T ss_pred CceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCH-h
Confidence 4456788999999999 65677889999982 11 100 00 3333332 23799999997 9
Q ss_pred CCcEEEEEEEeCC---CCCccceEEEEeec------CCccccC-CCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEe
Q psy14532 177 DRGVYWCTATNKQ---GRSSSQNVHISVTV------PPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLP 245 (258)
Q Consensus 177 ~~g~y~C~~~~~~---~~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~ 245 (258)
|+|.|.|.+.+.. .........|.|.. +|.+... +....+..|+.++|.|.+.+.+|.+ .+.|+++|+.
T Consensus 87 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~ 166 (245)
T 4ei6_B 87 DSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 166 (245)
T ss_dssp GCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred HCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEE
Confidence 9999999999632 11223445566653 3433322 2223455699999999996546655 8999999999
Q ss_pred ccccc
Q psy14532 246 ILSAM 250 (258)
Q Consensus 246 l~~~~ 250 (258)
+..+.
T Consensus 167 l~~~~ 171 (245)
T 4ei6_B 167 VHSGV 171 (245)
T ss_dssp ECTTE
T ss_pred CCCCc
Confidence 97643
No 390
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=4.2e-14 Score=89.10 Aligned_cols=85 Identities=29% Similarity=0.478 Sum_probs=70.4
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccC-CCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLP-LNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNV 197 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~ 197 (258)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+. ...+.....++.|.|.++.. +|+|.|+|.+.|..+. .+..+
T Consensus 15 p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~-~~~~~ 92 (100)
T 2edj_A 15 PANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRI-SDTGTYTCVATSSSGE-TSWSA 92 (100)
T ss_dssp CCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCT-TTCCEEEEEEECSSCC-CBCCE
T ss_pred cCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCc-ccCEEEEEEEEcCCCC-EEEEE
Confidence 455678899999999999999999999999988776 34455566778999999997 9999999999999884 46777
Q ss_pred EEEeecCC
Q psy14532 198 HISVTVPP 205 (258)
Q Consensus 198 ~l~v~~~p 205 (258)
.|.|..+|
T Consensus 93 ~l~V~~~~ 100 (100)
T 2edj_A 93 VLDVTESG 100 (100)
T ss_dssp EEEEESCC
T ss_pred EEEEecCC
Confidence 88877653
No 391
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=1.2e-14 Score=107.15 Aligned_cols=125 Identities=18% Similarity=0.360 Sum_probs=86.6
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCCc--cc-----------------CCCcceEEec-----CCeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGVQ--QL-----------------PLNRRQKVFP-----NGTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~~--~~-----------------~~~~~~~~~~-----~~~l~i~~~~ 173 (258)
....+.+|+.++|.|.+.+.| .+.+.|+++.. .. ....++.+.. ..+|.|.++.
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 456788999999999998866 57899998431 11 1123343332 2369999999
Q ss_pred cCCCCcEEEEEEEeCCCC-CccceEEEEeecCC---------------ccccCCCCCccCCCCeeeEEEEeccCCCCcee
Q psy14532 174 KDHDRGVYWCTATNKQGR-SSSQNVHISVTVPP---------------KIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTI 237 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~~-~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 237 (258)
. +|+|.|+|.+.+..+. .......|.|..++ .+...+....+.+|++++|.|.+ .+.|.+.+
T Consensus 90 ~-~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~v 167 (247)
T 2ghw_B 90 A-EDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRA-SQSVRSNL 167 (247)
T ss_dssp G-GGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEE-SSCCTTCE
T ss_pred H-HHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEe-CCCccceE
Confidence 8 9999999999987221 12234567776542 12222334568899999999999 57777899
Q ss_pred EEEE--CCEec
Q psy14532 238 SWLK--NGLPI 246 (258)
Q Consensus 238 ~W~~--~g~~l 246 (258)
.|++ +|..+
T Consensus 168 ~W~k~~~g~~~ 178 (247)
T 2ghw_B 168 AWYQQKPGQAP 178 (247)
T ss_dssp EEEEECTTSCC
T ss_pred EEEEECCCCCc
Confidence 9999 66544
No 392
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.56 E-value=1e-14 Score=105.57 Aligned_cols=125 Identities=22% Similarity=0.409 Sum_probs=85.4
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cc---c-C---------------CCcceEEec-----CCeEEEEe
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQ---L-P---------------LNRRQKVFP-----NGTLLIEN 171 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~---~-~---------------~~~~~~~~~-----~~~l~i~~ 171 (258)
....+.+|+.++|.|.+.+.+ .+.+.|++++ .. + . ...++.+.. ..+|.|.+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 446788999999999998755 6799999853 11 0 0 012333322 12799999
Q ss_pred cccCCCCcEEEEEEEeCCCCC--ccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCE
Q psy14532 172 VQKDHDRGVYWCTATNKQGRS--SSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGL 244 (258)
Q Consensus 172 ~~~~~~~g~y~C~~~~~~~~~--~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~ 244 (258)
++. +|+|.|.|.+.+..+.. ......|.|.. +|.+...+....+.+|+.++|.|.+.+.+|.+ .|.|++++.
T Consensus 88 v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 88 LRA-EDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp CCG-GGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCH-HHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 998 99999999999864321 11345666653 33333333233467899999999996455887 999999886
Q ss_pred e
Q psy14532 245 P 245 (258)
Q Consensus 245 ~ 245 (258)
.
T Consensus 167 ~ 167 (220)
T 1pz5_B 167 S 167 (220)
T ss_dssp C
T ss_pred c
Confidence 3
No 393
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.56 E-value=1.6e-14 Score=104.16 Aligned_cols=126 Identities=21% Similarity=0.407 Sum_probs=86.2
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC----------------CCcceEEec-----CCeEEEEeccc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP----------------LNRRQKVFP-----NGTLLIENVQK 174 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~----------------~~~~~~~~~-----~~~l~i~~~~~ 174 (258)
....+.+|+.++|.|.+.+.+ .+.+.|+++. .... ...++.+.. +.+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQT 87 (215)
T ss_dssp CCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCG
T ss_pred CCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCc
Confidence 446788999999999998754 5789999853 2210 123444332 13799999997
Q ss_pred CCCCcEEEEEEEeCCCC--CccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEec
Q psy14532 175 DHDRGVYWCTATNKQGR--SSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPI 246 (258)
Q Consensus 175 ~~~~g~y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l 246 (258)
+|+|.|.|.+.+..+. .......|.|.. +|.+...+....+..|+.++|.|.+.+.+|.+ .|.|+++|..+
T Consensus 88 -~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 88 -EDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp -GGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred -ccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 9999999999986421 122345677763 33333222233457899999999996555877 99999998764
No 394
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.56 E-value=1.1e-14 Score=104.45 Aligned_cols=124 Identities=16% Similarity=0.241 Sum_probs=78.9
Q ss_pred ecCCcEEEEeeeCccc----CceEEEEeCCcccCCCc--ceEEecCCeEEEEe---ccc--CCCCcEEEEEEEeCCCCC-
Q psy14532 125 IAGEPLYLGCPVAGYP----IESITWQKGVQQLPLNR--RQKVFPNGTLLIEN---VQK--DHDRGVYWCTATNKQGRS- 192 (258)
Q Consensus 125 ~~g~~~~l~C~~~~~~----~~~i~W~~~~~~~~~~~--~~~~~~~~~l~i~~---~~~--~~~~g~y~C~~~~~~~~~- 192 (258)
..|+.+.|.|.+.+.+ ...|.|++++..+.... ......++.+.+.. +.. .+|+|.|+|.+.|..+..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 6899999999998865 24999999987654321 11223345555432 222 145999999999986532
Q ss_pred ccceEEE--EeecCCccccCCCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEeccc
Q psy14532 193 SSQNVHI--SVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILS 248 (258)
Q Consensus 193 ~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~ 248 (258)
....+.+ .+..+|.+...+.......|+.+.|.|.+.+.+|+ +.|.|++||..+..
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 154 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN 154 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECC
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccC
Confidence 1112211 23445555443333222346679999999654665 59999999998864
No 395
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.56 E-value=1.4e-14 Score=103.51 Aligned_cols=109 Identities=19% Similarity=0.286 Sum_probs=77.6
Q ss_pred eecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 124 AIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 124 ~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
+.+|+.++|.|.+ |.+.+.|++++..+... ...+++|.|.++.. +|+|.|+|.+.+. .+..+.|.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~----~~~~~~L~i~~v~~-~DsG~Y~C~~~~~----~s~~~~v~v~~ 82 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL----TEDKKKWNLGSNAK-DPRGMYQCKGSQN----KSKPLQVYYRM 82 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE----ESSCCCEEEEEGGG-CCEEEEEEESSSS----CCCCEEEEEEC
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC----CCCCCeEEeCCCCc-CCCEEEEEEecCC----CCeeEEEEEEE
Confidence 4579999999998 77899999999876432 12456899999997 9999999996542 22335555541
Q ss_pred -------------------------------CCccccCCCCCccC-CCCeeeEEEEeccCCCCceeEEEECCEecccc
Q psy14532 204 -------------------------------PPKIAPFEFQPDLH-SGDRAGVQCLVTKGDPPLTISWLKNGLPILSA 249 (258)
Q Consensus 204 -------------------------------~p~~~~~~~~~~~~-~g~~~~l~C~~~~~~p~~~~~W~~~g~~l~~~ 249 (258)
++.+.. ....+. +|+.++|.|. +.|.+.+.|+++|..+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~v~~~G~~v~L~C~---g~p~p~i~W~k~~~~l~~~ 155 (204)
T 1sy6_A 83 GSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQ--TPYKVSISGTTVILTCP---QYPGSEILWQHNDKNIGGD 155 (204)
T ss_dssp ------------------------------------C--CCCEEEEETTEEEEECS---CCCSSCEEEEETTEEESCC
T ss_pred eccccccccccccccccccccccccccccccccceec--CCceeeecCCcEEEEcC---CCCCCceEEEECCEECCCc
Confidence 111111 112344 8999999998 5788899999999988653
No 396
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.56 E-value=1.2e-14 Score=108.42 Aligned_cols=129 Identities=23% Similarity=0.351 Sum_probs=87.1
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeC--CcccC---------------CC-cceEEec----CCeEEEEecccCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKG--VQQLP---------------LN-RRQKVFP----NGTLLIENVQKDH 176 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~--~~~~~---------------~~-~~~~~~~----~~~l~i~~~~~~~ 176 (258)
+..+.+.+|+.++|.|.+. .+.+.+.|++. +.... .. .++.+.. +.+|.|.+++. +
T Consensus 33 p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~-~ 110 (268)
T 3pl6_D 33 PSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTER-G 110 (268)
T ss_dssp CSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCG-G
T ss_pred CCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCc-c
Confidence 4456788999999999986 46779999982 22110 00 3344433 45799999997 9
Q ss_pred CCcEEEEEEEeCC-CCCccceEEEEeec------CCccccC-CCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEecc
Q psy14532 177 DRGVYWCTATNKQ-GRSSSQNVHISVTV------PPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPIL 247 (258)
Q Consensus 177 ~~g~y~C~~~~~~-~~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~ 247 (258)
|+|.|.|.+.+.. .........|.|.. +|.+... +....+..|+.++|.|.+.+.+|++ .+.|+++|+.+.
T Consensus 111 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~ 190 (268)
T 3pl6_D 111 DSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 190 (268)
T ss_dssp GCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEEC
T ss_pred cCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECC
Confidence 9999999999742 11223445566664 3433322 2223355699999999996445555 899999999986
Q ss_pred cc
Q psy14532 248 SA 249 (258)
Q Consensus 248 ~~ 249 (258)
.+
T Consensus 191 ~~ 192 (268)
T 3pl6_D 191 SG 192 (268)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 397
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.56 E-value=2.6e-15 Score=112.45 Aligned_cols=171 Identities=12% Similarity=0.117 Sum_probs=53.2
Q ss_pred ceeeeecCCCceEEEEEEeec-CCC--eEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCC
Q psy14532 9 FIQQTLQPGPPVSLKCIATGN-PTP--HISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDH 85 (258)
Q Consensus 9 ~~~~~~~~g~~v~l~C~~~~~-~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 85 (258)
+....+.+|+.++|.|.+.+. |.. .|.|+|+++.+..... .. .....+|.+... +.+
T Consensus 93 ~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~-----~~--------------~~~~~~l~~~~~-~~D 152 (291)
T 1mq8_A 93 PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA-----VG--------------EPAEVTTTVLVR-RDH 152 (291)
T ss_dssp CCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC-----CB--------------TTEEEEEECCCS-SSC
T ss_pred cCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC-----CC--------------CCceEEEEeeee-ecc
Confidence 333458899999999999874 443 5899999877654310 00 001224555555 666
Q ss_pred CceEEEEEEEeCCcc-------eeeceEEEEEecCCeec--cCCCcceecCCcEEEEeeeCcccCc---eEEEEeCCccc
Q psy14532 86 DRGVYWCTATNKQGR-------SSSQNVHISVTGAPFVR--PMGNVSAIAGEPLYLGCPVAGYPIE---SITWQKGVQQL 153 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~-------~~~~~~~l~v~~~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~---~i~W~~~~~~~ 153 (258)
|.+.|+|.|.+..+. ..+....|.|..+|... ......+.+|+.+.|.|.+.|.+++ .+.|++++..+
T Consensus 153 ~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l 232 (291)
T 1mq8_A 153 HGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRL 232 (291)
T ss_dssp SSCEEEEEEEEECGGGTSCEEEECCCCEECBC------------------------------------------------
T ss_pred CCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEec
Confidence 777999999986441 12366678887664221 1112357789999999999986443 69999999887
Q ss_pred CCCcceEEecCCeEEEEec---ccC-CCCcEEEEEEEeCCCCCccceEEEEeec
Q psy14532 154 PLNRRQKVFPNGTLLIENV---QKD-HDRGVYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 154 ~~~~~~~~~~~~~l~i~~~---~~~-~~~g~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
...... ..+.+.+... ..+ ++.+.|+|.+.+... .......|.|+.
T Consensus 233 ~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~-~~~~~~~l~v~~ 282 (291)
T 1mq8_A 233 NPTVTY---GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQ-SQETLQTVTIYS 282 (291)
T ss_dssp ------------------------------------------------------
T ss_pred Cceeee---cCCeEEEEEecceeEcCCCCEEEEEEEEeCCc-ceEEEEEEEEEc
Confidence 642111 1223332222 231 345678898886432 233455566654
No 398
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.56 E-value=2.9e-14 Score=104.54 Aligned_cols=130 Identities=22% Similarity=0.405 Sum_probs=88.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCc--ccC---------------CCcceEEec----CCeEEEEecccCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ--QLP---------------LNRRQKVFP----NGTLLIENVQKDHD 177 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~--~~~---------------~~~~~~~~~----~~~l~i~~~~~~~~ 177 (258)
+..+.+.+|+.++|.|.+.. +.+.+.|+++.. ... ...++.+.. +.+|.|.+++. +|
T Consensus 6 p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~-~D 83 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQTN-NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP-SQ 83 (238)
T ss_dssp CSEEEEETTCCEEEEEEESS-CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG-GG
T ss_pred CCeeEEeCCCcEEEEEEeCC-CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc-cc
Confidence 34567889999999999853 577999998542 110 122333322 23799999997 99
Q ss_pred CcEEEEEEEeCCC----CCccceEEEEeec------CCccccC-CCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEe
Q psy14532 178 RGVYWCTATNKQG----RSSSQNVHISVTV------PPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLP 245 (258)
Q Consensus 178 ~g~y~C~~~~~~~----~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~ 245 (258)
+|.|.|.+.+..+ ........|.|.. +|.+... +....+..|+.++|.|.+.+.+|. +.+.|++||+.
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~ 163 (238)
T 1bec_A 84 TSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKE 163 (238)
T ss_dssp CEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEE
T ss_pred CEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEE
Confidence 9999999998632 0112334566654 3444332 233446689999999999644575 49999999999
Q ss_pred ccccc
Q psy14532 246 ILSAM 250 (258)
Q Consensus 246 l~~~~ 250 (258)
+..+.
T Consensus 164 ~~~~~ 168 (238)
T 1bec_A 164 VHSGV 168 (238)
T ss_dssp ECTTE
T ss_pred CCCce
Confidence 87543
No 399
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.56 E-value=2.4e-14 Score=105.17 Aligned_cols=122 Identities=17% Similarity=0.198 Sum_probs=83.3
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCc--ccC------------CCcceEEec---CCeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ--QLP------------LNRRQKVFP---NGTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~--~~~------------~~~~~~~~~---~~~l~i~~~~~~~~~g~y 181 (258)
+....+.+|++++|.|.+.+.+.+.+.|+++.. ... ...++.+.. ..+|.|.++.. +|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y 86 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET-EDFGMY 86 (242)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG-GGCEEE
T ss_pred CCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCCh-HHCEEE
Confidence 445678899999999999988888999998531 110 122333321 23699999997 999999
Q ss_pred EEEEEeCCCCCccceEEEEeecCCc-------------cccCCCCCccCCCCeeeEEEEeccCCC--CceeEEEEC
Q psy14532 182 WCTATNKQGRSSSQNVHISVTVPPK-------------IAPFEFQPDLHSGDRAGVQCLVTKGDP--PLTISWLKN 242 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v~~~p~-------------~~~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~ 242 (258)
.|.+.+..+........|.|..+|. ....+....+.+|++++|.|.+. +.| .+.+.|+++
T Consensus 87 ~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 87 FCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVT-GDSITSDYXSXIRK 161 (242)
T ss_dssp EEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEE-SSCGGGSCEEEEEE
T ss_pred EEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEE-ccccCCcceeeEee
Confidence 9999987542233456677766542 11112234688999999999994 554 578999984
No 400
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.56 E-value=2.5e-14 Score=103.76 Aligned_cols=128 Identities=22% Similarity=0.376 Sum_probs=87.3
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~~ 173 (258)
..+.+.+|+.++|.|.+.+.+ .+.+.|+|+. .... ...++.+.. +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 456788999999999997654 4789999853 2110 123444332 2379999999
Q ss_pred cCCCCcEEEEEEEeCCC----C-CccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEE-C
Q psy14532 174 KDHDRGVYWCTATNKQG----R-SSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLK-N 242 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~----~-~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~-~ 242 (258)
. +|+|.|.|.+.+..+ . .....+.|.|.. +|.+........+..|+.++|.|.+.+.+|.+ .+.|++ +
T Consensus 88 ~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (223)
T 1dee_B 88 A-EDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKN 166 (223)
T ss_dssp G-GGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred H-HHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccC
Confidence 8 999999999998642 0 112345677763 33333222223457899999999996555776 999999 9
Q ss_pred CEeccc
Q psy14532 243 GLPILS 248 (258)
Q Consensus 243 g~~l~~ 248 (258)
|+.+..
T Consensus 167 g~~l~~ 172 (223)
T 1dee_B 167 NSDISS 172 (223)
T ss_dssp SCBCSC
T ss_pred CCccce
Confidence 988754
No 401
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.56 E-value=5.2e-14 Score=90.47 Aligned_cols=100 Identities=23% Similarity=0.339 Sum_probs=72.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeec--CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEe
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIE 79 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 79 (258)
+|.|...+.+..+.+|++++|.|.+.+. +.+.+.|+|++..+........... ..........+++|.|.
T Consensus 10 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~L~I~ 81 (112)
T 3so5_A 10 XPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHL--------RAQGGELMEYTTILRLR 81 (112)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEET--------TGGGSSCEEEEEEEEEC
T ss_pred CCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeee--------eccCCCccccceEEEEe
Confidence 6888888888999999999999999865 4579999999988764311000011 00101111224689999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEE
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISV 110 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v 110 (258)
++ +..|+|.|+|.+.|..|...+..+.|.|
T Consensus 82 ~v-~~~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 82 NV-EFTSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp SC-CGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cc-ccccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 99 9999999999999998875446677765
No 402
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.55 E-value=1.9e-14 Score=105.61 Aligned_cols=130 Identities=19% Similarity=0.365 Sum_probs=86.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCc--cc---------------CCCcceEEec----CCeEEEEecccCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ--QL---------------PLNRRQKVFP----NGTLLIENVQKDHD 177 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~--~~---------------~~~~~~~~~~----~~~l~i~~~~~~~~ 177 (258)
+..+.+.+|+.+.|.|.+.+ +.+.+.|++... .. ....++.+.. +.+|.|.+++. +|
T Consensus 9 p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~-~D 86 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALEL-ED 86 (240)
T ss_dssp CSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCG-GG
T ss_pred cceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCCh-hH
Confidence 44567889999999999876 777999998321 00 0112333322 33699999998 99
Q ss_pred CcEEEEEEEeC--CCCCccceEEEEeec------CCccccC-CCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEecc
Q psy14532 178 RGVYWCTATNK--QGRSSSQNVHISVTV------PPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLPIL 247 (258)
Q Consensus 178 ~g~y~C~~~~~--~~~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~l~ 247 (258)
+|.|.|.+.+. ..........|.|.. +|.+... +....+..|+.++|.|.+.+.+|.+ .+.|+++|+.+.
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~ 166 (240)
T 3q5y_A 87 SAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVH 166 (240)
T ss_dssp CEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECc
Confidence 99999999832 111223445566653 3333322 2223455689999999996546765 899999999986
Q ss_pred ccc
Q psy14532 248 SAM 250 (258)
Q Consensus 248 ~~~ 250 (258)
.+.
T Consensus 167 ~~~ 169 (240)
T 3q5y_A 167 SGV 169 (240)
T ss_dssp TTE
T ss_pred CcE
Confidence 543
No 403
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=7.7e-14 Score=90.70 Aligned_cols=100 Identities=25% Similarity=0.371 Sum_probs=76.6
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC-CcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccce
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL-NRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQN 196 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~ 196 (258)
.+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..+.....+++|.|.++.. +|+|.|+|.+.|..+. ....
T Consensus 14 ~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~-~~~~ 91 (118)
T 2eo9_A 14 GPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKL-GDTGRYTCIASTPSGE-ATWS 91 (118)
T ss_dssp CCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCG-GGCCCEEEEEECSSCE-EEEE
T ss_pred CCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCc-CCCEEEEEEEEcCCCc-EEEE
Confidence 35567788999999999999999999999999988754 4555666788999999998 9999999999999874 4555
Q ss_pred EEEEeecCCcc--ccCCCCCccCCC
Q psy14532 197 VHISVTVPPKI--APFEFQPDLHSG 219 (258)
Q Consensus 197 ~~l~v~~~p~~--~~~~~~~~~~~g 219 (258)
+.|.|..++.. ...+....+..|
T Consensus 92 ~~l~V~~~~~p~~~~~~~~~~~~~G 116 (118)
T 2eo9_A 92 AYIEVQEFGVPVQPPRPTDPNLIPS 116 (118)
T ss_dssp CCEEEECCSCCCCCCCCCCCCCCCC
T ss_pred EEEEEEeCCCCccCCCCCCCccCCC
Confidence 66777766543 333334444444
No 404
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.55 E-value=3.1e-14 Score=106.73 Aligned_cols=122 Identities=16% Similarity=0.238 Sum_probs=84.3
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcc-----c---------CCCcceEEecC---CeEEEEecccCCCCcEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQ-----L---------PLNRRQKVFPN---GTLLIENVQKDHDRGVY 181 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~-----~---------~~~~~~~~~~~---~~l~i~~~~~~~~~g~y 181 (258)
+..+.+.+|+.++|.|.+.+.|.+.+.|++++.. + ....++.+..+ .+|.|.++.. +|+|.|
T Consensus 19 p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y 97 (276)
T 3auv_A 19 PSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP-EDFATY 97 (276)
T ss_dssp CSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-GGCEEE
T ss_pred CCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh-hhCEEE
Confidence 4556788999999999999888889999985421 1 01223333222 2799999997 999999
Q ss_pred EEEEEeCCCCCccceEEEEeecCCc-------------ccc-CCCCCccCCCCeeeEEEEeccCCC--CceeEEEEC
Q psy14532 182 WCTATNKQGRSSSQNVHISVTVPPK-------------IAP-FEFQPDLHSGDRAGVQCLVTKGDP--PLTISWLKN 242 (258)
Q Consensus 182 ~C~~~~~~~~~~~~~~~l~v~~~p~-------------~~~-~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~ 242 (258)
.|.+.+..+........|.|..+|. +.. .+....+.+|+.++|.|.+. +.| .+.+.|+++
T Consensus 98 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~-g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 98 YCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAAS-GFTISDYWIHWVRQ 173 (276)
T ss_dssp EEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEE-SSCGGGSEEEEEEE
T ss_pred EEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEec-CccCCCCEEEEEEc
Confidence 9999987543334446677765432 111 23456788999999999995 544 589999995
No 405
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.55 E-value=4.8e-14 Score=103.62 Aligned_cols=128 Identities=23% Similarity=0.326 Sum_probs=86.9
Q ss_pred CCCcceecCCcEEEEeeeCcc--cCceEEEEeCC--cccC-----------------CCcceEEe-----cCCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGY--PIESITWQKGV--QQLP-----------------LNRRQKVF-----PNGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--~~~~i~W~~~~--~~~~-----------------~~~~~~~~-----~~~~l~i~~~ 172 (258)
+..+.+.+|+.++|.|.+.+. +...+.|+++. .... ...++.+. .+.+|.|.++
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (242)
T 1hxm_B 8 QISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNV 87 (242)
T ss_dssp CSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSC
T ss_pred CceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCC
Confidence 445678899999999998764 56789999843 2110 12333332 1346999999
Q ss_pred ccCCCCcEEEEEEEeCCC-C-----CccceEEEEeecC-------CccccC-CCCCccCCCCeeeEEEEeccCCCC-cee
Q psy14532 173 QKDHDRGVYWCTATNKQG-R-----SSSQNVHISVTVP-------PKIAPF-EFQPDLHSGDRAGVQCLVTKGDPP-LTI 237 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~-~-----~~~~~~~l~v~~~-------p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~-~~~ 237 (258)
+. +|+|.|.|.+.+... . .......|.|... |.+.+. +....+..|+.++|.|.+.+.+|. +.+
T Consensus 88 ~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v 166 (242)
T 1hxm_B 88 EK-QDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKI 166 (242)
T ss_dssp CG-GGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEE
T ss_pred Cc-ccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEE
Confidence 97 999999999987631 1 1123456777653 333332 223345679999999999655575 799
Q ss_pred EEEECCE-ecc
Q psy14532 238 SWLKNGL-PIL 247 (258)
Q Consensus 238 ~W~~~g~-~l~ 247 (258)
.|+++|. .+.
T Consensus 167 ~W~~~~~~~l~ 177 (242)
T 1hxm_B 167 HWEEKKSNTIL 177 (242)
T ss_dssp EEEESSSCCCC
T ss_pred EEEcCCCEeec
Confidence 9999987 564
No 406
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.55 E-value=1.9e-14 Score=106.48 Aligned_cols=122 Identities=17% Similarity=0.335 Sum_probs=84.8
Q ss_pred CCCcceecCCcEEEEeeeCcc--cCceEEEEeCC--cccC-----------------CCcceEEecC-----CeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGY--PIESITWQKGV--QQLP-----------------LNRRQKVFPN-----GTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--~~~~i~W~~~~--~~~~-----------------~~~~~~~~~~-----~~l~i~~~ 172 (258)
+....+.+|++++|.|.+.+. +.+.+.|++.. ..+. ...++.+..+ .+|.|.++
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 87 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSL 87 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCC
Confidence 445678899999999999874 36799999832 1110 1123333221 23999999
Q ss_pred ccCCCCcEEEEEEEeCCCCCccceEEEEeec---------------CCccccCCCCCccCCCCeeeEEEEeccCCCCc--
Q psy14532 173 QKDHDRGVYWCTATNKQGRSSSQNVHISVTV---------------PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-- 235 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-- 235 (258)
+. +|+|.|.|.+.+..+........|.|.. ++.+...+....+.+|++++|.|.+ .+.|.+
T Consensus 88 ~~-~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~~~~~~~ 165 (253)
T 3uzq_A 88 TS-GDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRA-SENVDRYG 165 (253)
T ss_dssp CG-GGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEE-SSCCEETT
T ss_pred Cc-ccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEe-cCccccCC
Confidence 97 9999999999986543334556677764 2334444555678899999999999 466665
Q ss_pred --eeEEEEC
Q psy14532 236 --TISWLKN 242 (258)
Q Consensus 236 --~~~W~~~ 242 (258)
.+.|+++
T Consensus 166 ~~~v~W~r~ 174 (253)
T 3uzq_A 166 NSFMHWYQQ 174 (253)
T ss_dssp EECEEEEEE
T ss_pred CcEEEEEEE
Confidence 8999984
No 407
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.55 E-value=6.9e-14 Score=90.56 Aligned_cols=92 Identities=25% Similarity=0.526 Sum_probs=73.3
Q ss_pred eeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC-CcceEEecCC----eEEEEecccCCCCcEEEEEEEeCC
Q psy14532 115 FVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL-NRRQKVFPNG----TLLIENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~-~~~~~~~~~~----~l~i~~~~~~~~~g~y~C~~~~~~ 189 (258)
++..+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+..++ +|.|.++.. +|+|.|+|.+.|..
T Consensus 18 f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~ 96 (116)
T 2kkq_A 18 FIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNK-KDAGWYTVSAVNEA 96 (116)
T ss_dssp BSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECG-GGCEEEEEEEEETT
T ss_pred EEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCc-ccCEEEEEEEEcCC
Confidence 44456677899999999999999999999999999987764 3444443332 799999998 99999999999998
Q ss_pred CCCccceEEEEeecCCccc
Q psy14532 190 GRSSSQNVHISVTVPPKIA 208 (258)
Q Consensus 190 ~~~~~~~~~l~v~~~p~~~ 208 (258)
+. .+..+.|.|..+|...
T Consensus 97 G~-~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 97 GV-TTCNTRLDVTARPNQT 114 (116)
T ss_dssp EE-EEEEEEEEEECCSCCC
T ss_pred Ce-EEEEEEEEEeCCCCCC
Confidence 74 5567888888777543
No 408
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.55 E-value=2e-14 Score=90.43 Aligned_cols=83 Identities=29% Similarity=0.474 Sum_probs=66.2
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc--ceEEecC---CeEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR--RQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~--~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
.+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.+... .+|.|.++.. +|+|.|+|.|.|..|.
T Consensus 11 ~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~N~~G~- 88 (100)
T 3knb_A 11 LPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQK-QDGGLYTLSLGNEFGS- 88 (100)
T ss_dssp CCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCG-GGCEEEEEEEEETTEE-
T ss_pred CCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCc-cCCEEEEEEEEECCCE-
Confidence 3456778999999999999999999999999998876543 3333332 3699999997 9999999999999884
Q ss_pred ccceEEEEee
Q psy14532 193 SSQNVHISVT 202 (258)
Q Consensus 193 ~~~~~~l~v~ 202 (258)
.+..+.|.|.
T Consensus 89 ~~~~~~l~V~ 98 (100)
T 3knb_A 89 DSATVNIHIR 98 (100)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 4566667664
No 409
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.55 E-value=1.9e-14 Score=108.08 Aligned_cols=130 Identities=22% Similarity=0.391 Sum_probs=88.3
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccC-----------------CCcceEEec----CCeEEEEecccC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLP-----------------LNRRQKVFP----NGTLLIENVQKD 175 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~-----------------~~~~~~~~~----~~~l~i~~~~~~ 175 (258)
+..+.+.+|+.++|.|.+.+.+.+.+.|+++. .... ...++.+.. +.+|.|.+++.
T Consensus 31 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~- 109 (279)
T 2wbj_D 31 PSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHP- 109 (279)
T ss_dssp CSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCG-
T ss_pred CCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCc-
Confidence 34567889999999999987788899999853 1110 123333332 23799999997
Q ss_pred CCCcEEEEEEEeCCC----C-CccceEEEEeec------CCccccC-CCCCccCCCCeeeEEEEeccCCCC-ceeEEEEC
Q psy14532 176 HDRGVYWCTATNKQG----R-SSSQNVHISVTV------PPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKN 242 (258)
Q Consensus 176 ~~~g~y~C~~~~~~~----~-~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~ 242 (258)
+|+|.|.|.+.+..+ . .......|.|.. +|.+... +....+..|+.++|.|.+.+.+|+ +.|.|++|
T Consensus 110 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~ 189 (279)
T 2wbj_D 110 EDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 189 (279)
T ss_dssp GGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEET
T ss_pred cCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEEC
Confidence 999999999998421 0 112334566654 3433322 112234468999999999645565 79999999
Q ss_pred CEecccc
Q psy14532 243 GLPILSA 249 (258)
Q Consensus 243 g~~l~~~ 249 (258)
|+.+..+
T Consensus 190 g~~l~~~ 196 (279)
T 2wbj_D 190 GKEVHSG 196 (279)
T ss_dssp TEECCTT
T ss_pred CEECCCC
Confidence 9998754
No 410
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.54 E-value=5.7e-14 Score=88.47 Aligned_cols=90 Identities=18% Similarity=0.249 Sum_probs=67.4
Q ss_pred CCcceeecee-eeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQ-QTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~-~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.|...+.+ ..+.+|++++|.|.+. .|.+.+.|+|++..+... .++.+.. .....+|.|.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~---~~~~~~~-------------~~~~~~L~I~~ 69 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPS---TKYIFEH-------------KGCQRILFINN 69 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCB---TTEEEEE-------------ETTEEEEEEEE
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCC---CCEEEEe-------------cCCEEEEEEcC
Confidence 6888888877 5788999999999998 688899999998877543 1222110 00123699999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
+ ..+|+|.|+|.+ +... ..+.|.|..+|
T Consensus 70 ~-~~~D~G~Y~C~a----g~~~-~~~~l~V~~~P 97 (100)
T 2yuv_A 70 C-QMTDDSEYYVTA----GDEK-CSTELFVRSGP 97 (100)
T ss_dssp E-CTTTCCEEEEEE----TTEE-EEEEEEECCSC
T ss_pred C-CcCcCEEEEEEE----CCce-EEEEEEEecCC
Confidence 9 999999999999 3344 66788887765
No 411
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.54 E-value=5.2e-14 Score=104.29 Aligned_cols=121 Identities=17% Similarity=0.383 Sum_probs=84.4
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEecC-----CeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFPN-----GTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~-----~~l~i~~~~ 173 (258)
....+.+|++++|.|.+.+.+ .+.+.|++.. .... ...++.+..+ .+|.|.++.
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 445688999999999988754 6799999842 1110 1123333221 249999999
Q ss_pred cCCCCcEEEEEEEeCCC---CCccceEEEEeec----------------CCccccCCCCCccCCCCeeeEEEEeccCCCC
Q psy14532 174 KDHDRGVYWCTATNKQG---RSSSQNVHISVTV----------------PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP 234 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~---~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~ 234 (258)
. +|+|.|.|.+.+... ........|.|.. +|.+...+....+.+|++++|.|.+ .+.|.
T Consensus 90 ~-~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~ 167 (256)
T 3umt_A 90 S-EDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRA-SQDIG 167 (256)
T ss_dssp G-GGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEE-SSCCT
T ss_pred c-ccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEE-ecCCC
Confidence 7 999999999998721 1223456677764 3444444555678899999999999 57777
Q ss_pred ceeEEEEC
Q psy14532 235 LTISWLKN 242 (258)
Q Consensus 235 ~~~~W~~~ 242 (258)
+.+.|++.
T Consensus 168 ~~v~W~k~ 175 (256)
T 3umt_A 168 SNLNWLQQ 175 (256)
T ss_dssp TCEEEEEE
T ss_pred cEEEEEEE
Confidence 89999983
No 412
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.54 E-value=5.5e-14 Score=88.19 Aligned_cols=82 Identities=26% Similarity=0.385 Sum_probs=63.4
Q ss_pred eeceeeeecCCCceEEEEEEe-ecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCC
Q psy14532 7 YKFIQQTLQPGPPVSLKCIAT-GNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDH 85 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 85 (258)
..+..+.+.+|++++|.|.+. +.|.+.+.|+|++...... .....+++|.|.++ +.+
T Consensus 15 ~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~---------------------~~~~~~~~L~i~~v-~~~ 72 (98)
T 1gl4_B 15 EEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS---------------------RAMDFNGILTIRNV-QPS 72 (98)
T ss_dssp CSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCT---------------------TEEEETTEEEECSC-CGG
T ss_pred eCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCc---------------------eeecCCCEEEEeCC-Chh
Confidence 345677899999999999998 5788899999974332211 01123668999999 999
Q ss_pred CceEEEEEEEeCCcceeeceEEEEEe
Q psy14532 86 DRGVYWCTATNKQGRSSSQNVHISVT 111 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~~~~~~~~l~v~ 111 (258)
|+|.|+|.+.|..|... ..+.|.|.
T Consensus 73 D~G~Y~C~a~n~~g~~~-~~~~l~V~ 97 (98)
T 1gl4_B 73 DAGTYVCTGSNMFAMDQ-GTATLHVQ 97 (98)
T ss_dssp GCEEEEEEEECSSCEEE-EEEEEEEC
T ss_pred hCEEEEEEecCCCCccc-cEEEEEEe
Confidence 99999999999988766 66777664
No 413
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.54 E-value=4.6e-14 Score=90.22 Aligned_cols=99 Identities=23% Similarity=0.375 Sum_probs=63.9
Q ss_pred EEEEEecCCeec-cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEe-cCCeEEEEecccCCCCcEEEE
Q psy14532 106 VHISVTGAPFVR-PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVF-PNGTLLIENVQKDHDRGVYWC 183 (258)
Q Consensus 106 ~~l~v~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~~~~g~y~C 183 (258)
+.|.+..+|.+. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+......... .++.|.|.++.. +|+|.|+|
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C 81 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRK-EDEGLYTC 81 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCG-GGCEEEEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCc-ccCEEEEE
Confidence 345555455433 456678889999999999999999999999999887665554443 456899999997 99999999
Q ss_pred EEEeCCCCCccceEEEEeecCCc
Q psy14532 184 TATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 184 ~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
.+.|..+. ....+.|.|..+|.
T Consensus 82 ~a~n~~g~-~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 82 QACSVLGC-AKVEAFFIIEGAQE 103 (108)
T ss_dssp EEC----C-EEEEEEEEEEC---
T ss_pred EEEeCCCc-eEEEEEEEEeCCCc
Confidence 99998874 55667888877664
No 414
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.54 E-value=1.6e-14 Score=105.15 Aligned_cols=126 Identities=22% Similarity=0.395 Sum_probs=83.8
Q ss_pred CCcceecCCcEEEEeeeCcccC----ceEEEEeCC--cccC----------------CCcceEEec-----CCeEEEEec
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPI----ESITWQKGV--QQLP----------------LNRRQKVFP-----NGTLLIENV 172 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~----~~i~W~~~~--~~~~----------------~~~~~~~~~-----~~~l~i~~~ 172 (258)
....+.+|+.++|.|.+.+.+. +.+.|+++. .... ...++.+.. +.+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 4467889999999999987653 789999853 2210 123344332 257999999
Q ss_pred ccCCCCcEEEEEEEeCCC------C--CccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEE
Q psy14532 173 QKDHDRGVYWCTATNKQG------R--SSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISW 239 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~------~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W 239 (258)
+. +|+|.|.|.+.+..+ . .......|.|.. +|.+...+....+..|+.++|.|.+.+.+|.+ .|.|
T Consensus 88 ~~-~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 88 DT-ADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CG-GGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred Cc-ccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 98 999999999998643 1 112335677763 33333222223457899999999996555776 9999
Q ss_pred EECCEec
Q psy14532 240 LKNGLPI 246 (258)
Q Consensus 240 ~~~g~~l 246 (258)
+++|..+
T Consensus 167 ~~~~~~~ 173 (228)
T 3bae_H 167 NSGSLSS 173 (228)
T ss_dssp GGGTCCT
T ss_pred eeCCccc
Confidence 9998764
No 415
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=3e-14 Score=89.59 Aligned_cols=86 Identities=23% Similarity=0.448 Sum_probs=67.0
Q ss_pred eeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCC
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDH 85 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 85 (258)
...+..+.+.+|++++|.|.+.+.| +.+.|+|++..+... .+..+ ..++|.|.++ +..
T Consensus 7 ~~~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~---~~~~~-----------------~~~~L~i~~v-~~~ 64 (99)
T 2cr3_A 7 GVEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAES---NRTRI-----------------TGEEVEVQDS-VPA 64 (99)
T ss_dssp SCCEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCC---SSEEE-----------------CSSEEEETTC-CTT
T ss_pred CCCCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCC---CcEEE-----------------ECCEEEEccC-CHH
Confidence 3456778899999999999998876 799999998766443 11111 2468999999 999
Q ss_pred CceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 86 DRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
|+|.|+|.+.|..+... ..+.|.|...+
T Consensus 65 D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~ 92 (99)
T 2cr3_A 65 DSGLYACVTSSPSGSDT-TYFSVNVSDAL 92 (99)
T ss_dssp TCEEEEEEEEETTEEEE-EEEEECBCSCC
T ss_pred HCEEEEEEEEeCCceEE-EEEEEEEecCC
Confidence 99999999999988765 67777776543
No 416
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=4.6e-14 Score=88.75 Aligned_cols=84 Identities=21% Similarity=0.343 Sum_probs=70.1
Q ss_pred ccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 117 RPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
..+....+.+|+.+.|.|.+ .|.+.+.|++++..+....++.+..++ .|.|.++.. +|+|.|+|.+.|. ..
T Consensus 12 ~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~---~~ 85 (100)
T 2yuz_A 12 TPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALT-EDEGDYVFAPDAY---NV 85 (100)
T ss_dssp BCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCG-GGCSEEEEEESSS---CC
T ss_pred ccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCCh-hhCEEEEEEEcCC---Ce
Confidence 34567789999999999999 688899999999998877777766554 699999998 9999999999997 34
Q ss_pred cceEEEEeecCCc
Q psy14532 194 SQNVHISVTVPPK 206 (258)
Q Consensus 194 ~~~~~l~v~~~p~ 206 (258)
+....|.|..+|.
T Consensus 86 ~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 86 TLPAKVHVISGPS 98 (100)
T ss_dssp CEEEEEEEECCSC
T ss_pred eEEEEEEEeCCCC
Confidence 5677888887764
No 417
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.53 E-value=1.1e-13 Score=87.62 Aligned_cols=98 Identities=19% Similarity=0.317 Sum_probs=70.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||+|..-. ....|+.+.|.|.+.|.|.|.+.|+|+|..+...... ...+.. .......++|.|.++
T Consensus 4 pP~i~~~~---~~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~-~~~~~~----------~~~~~~~~~L~I~~v 69 (103)
T 1wwb_X 4 APTITFLE---SPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYI-CTKIHV----------TNHTEYHGCLQLDNP 69 (103)
T ss_dssp CCCCCCCC---CCCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSE-EEEEEE----------ECSSEEEEEEEEESC
T ss_pred CCEEEecc---CceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcE-eEEEEe----------cCCcEEEEEEEECCC
Confidence 67763221 1356889999999999999999999999887654110 010000 000112346999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
...|+|.|+|.+.|..|... ..+.|.|...|.
T Consensus 70 -~~~D~G~Y~C~A~N~~G~~~-~~~~l~V~~~P~ 101 (103)
T 1wwb_X 70 -THMNNGDYTLIAKNEYGKDE-KQISAHFMGWPG 101 (103)
T ss_dssp -CGGGCEEEEEEEECSSCEEE-EEEEECCSCCCC
T ss_pred -CcccCEEEEEEEEeCCCcEe-EEEEEEECCCCC
Confidence 99999999999999999877 888888877654
No 418
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=3.7e-14 Score=89.87 Aligned_cols=92 Identities=18% Similarity=0.235 Sum_probs=68.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
|+.|...+.++.+.+|++++|.|.+.+ +.+.+.|+|++..+...... ++.+. ......+|.|.++
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~-~~~~~-------------~~~~~~~L~I~~~ 71 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKS-RYRIR-------------VEGKKHILIIEGA 71 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTC-SEEEE-------------EETTEEEEEEEEE
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCce-EEEEE-------------EcCCEEEEEECCC
Confidence 344778888999999999999999977 66899999999887654211 11111 0001247999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
+.+|+|.|+|.+.| . ...+.|.|..++
T Consensus 72 -~~~D~G~Y~C~a~n----~-~~~~~l~V~~~p 98 (103)
T 1x44_A 72 -TKADAAEYSVMTTG----G-QSSAKLSVDLKS 98 (103)
T ss_dssp -CTTTCSEEEEEETT----E-EEEEEEEEECCC
T ss_pred -CcccCEEEEEEECC----C-cEEEEEEEeCCC
Confidence 99999999999976 2 366777887654
No 419
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.53 E-value=3e-14 Score=102.76 Aligned_cols=128 Identities=22% Similarity=0.378 Sum_probs=83.0
Q ss_pred CCCcceecCCcEEEEeeeCcc--cCceEEEEeCC--cccC----------------CCcceEEecCC---eEEEEecccC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGY--PIESITWQKGV--QQLP----------------LNRRQKVFPNG---TLLIENVQKD 175 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--~~~~i~W~~~~--~~~~----------------~~~~~~~~~~~---~l~i~~~~~~ 175 (258)
+....+.+|+.++|.|.+.+. +.+.+.|++.. .... ...++.+...+ .|.|.+++.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~- 84 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT- 84 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG-
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc-
Confidence 345678899999999999653 36789999742 1110 11223332222 499999997
Q ss_pred CCCcEEEEEEEeCCCC---CccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCC-CceeEEEECCEecc
Q psy14532 176 HDRGVYWCTATNKQGR---SSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP-PLTISWLKNGLPIL 247 (258)
Q Consensus 176 ~~~g~y~C~~~~~~~~---~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~l~ 247 (258)
+|+|.|.|.+.+..+. .......|.|. .+|.+...+....+..|+.++|.|.+.+++| .+.+.|+++|..+.
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~ 164 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNG 164 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECC
Confidence 9999999999987431 12344556665 3444432333345678999999999965455 45788999997553
No 420
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=3.4e-14 Score=94.61 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=64.6
Q ss_pred eceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcC------------CccccceecccceeeccccccceeeeeC--
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAG------------DRHENKNRIGEARVQQLPLNRRQKVFPN-- 73 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 73 (258)
.+.++.+.+|+++.|.|.+.|.|.|.+.|+|++..... .........+.... .....+..+..+
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~r~~i~~~~~ 101 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLL--CETEGRVRVETTKD 101 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCC--CSCSSSCEEEEETT
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceee--cCCCCeEEEEeCCC
Confidence 36788999999999999999999999999998721000 00000000000000 000011111122
Q ss_pred -CcEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEe
Q psy14532 74 -GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 111 (258)
Q Consensus 74 -~~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 111 (258)
.+|.|.++ ...|+|.|+|.+.|..|... ..+.|.|.
T Consensus 102 ~s~L~I~~v-~~~DsG~Y~C~A~N~~G~~~-~~~~L~V~ 138 (139)
T 1gxe_A 102 RSIFTVEGA-EKEDEGVYTVTVKNPVGEDQ-VNLTVKVI 138 (139)
T ss_dssp EEEEECSCC-CTTTCEEEEEEEECSSCEEE-EEEEEEEC
T ss_pred EEEEEECCC-CcccCEEEEEEEEeCCceEE-EEEEEEEE
Confidence 35999999 99999999999999999776 77777775
No 421
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.53 E-value=6.3e-14 Score=104.02 Aligned_cols=123 Identities=17% Similarity=0.233 Sum_probs=80.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccCC----C-------------cceEE-----ecCCeEEEEeccc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLPL----N-------------RRQKV-----FPNGTLLIENVQK 174 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~~----~-------------~~~~~-----~~~~~l~i~~~~~ 174 (258)
+..+.+.+|++++|.|.+.+.+.+.+.|++.. ..... . .+... ....+|.|.+++.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 88 (259)
T 3omz_A 9 TKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIE 88 (259)
T ss_dssp --CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCG
T ss_pred CceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCc
Confidence 45577899999999999998888899999832 11100 0 01111 1234699999998
Q ss_pred CCCCcEEEEEEEeCCCC--CccceEEEEeecC-----------------CccccCCCCCccCCCCeeeEEEEeccCCCCc
Q psy14532 175 DHDRGVYWCTATNKQGR--SSSQNVHISVTVP-----------------PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL 235 (258)
Q Consensus 175 ~~~~g~y~C~~~~~~~~--~~~~~~~l~v~~~-----------------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 235 (258)
+|+|.|.|.+.+..+. .......|.|..+ |.+...+....+.+|++++|.|.+....|.+
T Consensus 89 -~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 167 (259)
T 3omz_A 89 -NDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSY 167 (259)
T ss_dssp -GGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSC
T ss_pred -ccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCc
Confidence 9999999999986542 2234456666653 2334445556788999999999985445789
Q ss_pred eeEEEEC
Q psy14532 236 TISWLKN 242 (258)
Q Consensus 236 ~~~W~~~ 242 (258)
.+.|++.
T Consensus 168 ~v~W~k~ 174 (259)
T 3omz_A 168 YIFWYKR 174 (259)
T ss_dssp EEEEEEE
T ss_pred eEEEeee
Confidence 9999984
No 422
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=1.7e-14 Score=91.45 Aligned_cols=91 Identities=19% Similarity=0.274 Sum_probs=69.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|...+.++.+.+|++++|.|.+.+ +.+.+.|+|++..+... .++.+.. .....+|.|.++
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~---~~~~~~~-------------~~~~~~L~I~~v 70 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKS---QKYDVVC-------------EGTMAMLVIRGA 70 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCS---SSEEEEE-------------ETTEEEEEESSC
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCC---CCEEEEE-------------CCCEEEEEECCC
Confidence 678888889999999999999999987 77799999998877543 1221110 001226999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
..+|+|.|+|.+.|. ...+.|.|..+|.
T Consensus 71 -~~~D~G~Y~C~a~n~-----~~~~~l~V~~~p~ 98 (103)
T 2edf_A 71 -SLKDAGEYTCEVEAS-----KSTASLHVEEKAS 98 (103)
T ss_dssp -CTTTCSEEEEECSSC-----EEEEEEEECCCSS
T ss_pred -CcccCEEEEEEEccC-----CcEEEEEEeCCCC
Confidence 999999999999882 3677888876653
No 423
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=1.7e-14 Score=91.50 Aligned_cols=92 Identities=11% Similarity=0.207 Sum_probs=68.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCC-CeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPT-PHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
||.|...+.++.+.+|++++|.|.+.+.+. +.+.|+|+|..+... .++.+. ......+|.|.+
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~---~r~~~~-------------~~~~~~~L~I~~ 71 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSS---SRFQAT-------------RQGRKYILVVRE 71 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBC---SSCEEE-------------EETTEEEEEECS
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCC---CCEEEE-------------EcCCEEEEEECC
Confidence 567888889999999999999999988764 479999999877544 222111 000123799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
+ +.+|+|.|+|.+.+. . ..+.|.|..+|.
T Consensus 72 v-~~~D~G~Y~C~a~~~----~-~~a~L~V~~~p~ 100 (104)
T 2eny_A 72 A-APSDAGEVVFSVRGL----T-SKASLIVRERSG 100 (104)
T ss_dssp C-CTTTCSCEEEEETTE----E-EEECEEEECCCS
T ss_pred C-CHHHCEEEEEEECCe----e-EEEEEEEeCCCc
Confidence 9 999999999987442 2 667788887654
No 424
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.53 E-value=5.4e-14 Score=89.87 Aligned_cols=102 Identities=17% Similarity=0.251 Sum_probs=69.1
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCE-eCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGY-PLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.+...+.++.+.+|++++|.|.+.+.+.+.+.|++++. .+.... ....... ++........+.+|.|.+
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~---~~~~~~~-----r~~~~~~~~~~~~L~I~~ 77 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDD---KKALRDN-----RIELVRASWHELSISVSD 77 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETT---EECSCCT-----TEEEEEESSSEEEEEECS
T ss_pred CCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcC---CcccccC-----cEEEeecCCCcEEEEECC
Confidence 4677888899999999999999999998888999999764 221110 0000000 000000001356799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
+ +.+|+|.|+|.+.+ .+... ..+.|.|..+|
T Consensus 78 v-~~~D~G~Y~C~~~n-~~~~~-~~~~L~V~~~P 108 (108)
T 3m45_A 78 V-SLSDEGQYTCSLFT-MPVKT-SKAYLTVLGVP 108 (108)
T ss_dssp C-CGGGCEEEEEEECS-SSCEE-EEEEEEEECCC
T ss_pred C-ChhHCeEEEEEEEc-CCCcE-EEEEEEEEcCC
Confidence 9 99999999999999 55554 77888887654
No 425
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.52 E-value=2.7e-14 Score=91.01 Aligned_cols=91 Identities=15% Similarity=0.256 Sum_probs=67.5
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|+++.|.|.+.+.+.+ +.|+|++..+... .++.+. ......+|.|.+
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~---~~~~~~-------------~~~~~~~L~I~~ 69 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPS---KRITIS-------------HVGRFHKLVIDD 69 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCC---SSCEEE-------------EETTEEEEEESS
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCC---CCEEEE-------------EeCCEEEEEECC
Confidence 37888899999999999999999999987776 9999998877543 121111 000123799999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEec
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTG 112 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~ 112 (258)
+ +.+|+|.|+|.+.|.. .. ..+.|.|..
T Consensus 70 v-~~~D~G~Y~C~a~n~~--~~-~~~~l~V~~ 97 (106)
T 2dlt_A 70 V-RPEDEGDYTFVPDGYA--LS-LSAKLNFLE 97 (106)
T ss_dssp C-CTTTCSCEEEEEETSC--CC-CCBCEEEEC
T ss_pred C-CcCCCEEEEEEEccCC--ce-EEEEEEEEE
Confidence 9 9999999999999872 22 445556553
No 426
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.52 E-value=3.9e-14 Score=105.15 Aligned_cols=128 Identities=19% Similarity=0.323 Sum_probs=85.5
Q ss_pred CCCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~ 172 (258)
+....+.+|+.++|.|.+.+.+ .+.+.|+|+. ..+. ...++.+.. ...|.|.++
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 3456788999999999998765 6789999863 2211 112333322 247999999
Q ss_pred ccCCCCcEEEEEEEeCCCC--CccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEe
Q psy14532 173 QKDHDRGVYWCTATNKQGR--SSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLP 245 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~--~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~ 245 (258)
+. +|+|.|.|.+.+..+. .......|.|.. +|.+........+..|+.++|.|.+.+.+|.+ .|.|++++..
T Consensus 93 ~~-~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~ 171 (261)
T 2xqy_G 93 TS-EDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 171 (261)
T ss_dssp CG-GGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred Cc-ccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCc
Confidence 98 9999999999985321 112345677764 23333222223467799999999996445765 9999999887
Q ss_pred cc
Q psy14532 246 IL 247 (258)
Q Consensus 246 l~ 247 (258)
+.
T Consensus 172 ~~ 173 (261)
T 2xqy_G 172 SG 173 (261)
T ss_dssp TT
T ss_pred Cc
Confidence 53
No 427
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.52 E-value=6.2e-14 Score=104.50 Aligned_cols=118 Identities=21% Similarity=0.447 Sum_probs=84.4
Q ss_pred CCCcceecCCcEEEEeeeC---cccCceEEEEeCCcccCCC------------------cceEEe-----cCCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVA---GYPIESITWQKGVQQLPLN------------------RRQKVF-----PNGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~---~~~~~~i~W~~~~~~~~~~------------------~~~~~~-----~~~~l~i~~~ 172 (258)
+....+.+|+.+.|.|.+. +.+.+.+.|++++...... .+..+. .+.+|.|.++
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 91 (268)
T 3mj6_A 12 SPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDV 91 (268)
T ss_dssp CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSC
T ss_pred CCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCC
Confidence 4456788999999999987 6677789999965432211 222221 2267999999
Q ss_pred ccCCCCcEEEEEEEeCCCCC-ccceEEEEeecCCccccCCCCCccCCCCeeeEEEEec--cCCCCceeEEEEC
Q psy14532 173 QKDHDRGVYWCTATNKQGRS-SSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVT--KGDPPLTISWLKN 242 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~--~~~p~~~~~W~~~ 242 (258)
+. +|+|.|+|.+.+..+.. .+..+.|.|. +. .+....+..|+.++|.|.+. .+.|.+.+.|+++
T Consensus 92 ~~-~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~~---~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 92 QK-ADEGIYTCEIRLKNESMVMKKPVELWVL--PE---EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp CG-GGCEEEEEEEEETTCCCEEEEEEEEEEE--CC---CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred CH-hHCEEEEEEEEecCCcceEEEEEEEEEe--cc---CCCccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 97 99999999999875432 3344555554 21 23345678899999999993 4678899999993
No 428
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=87.92 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=68.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCcccc-------ceecccceeeccccccceeeeeCC
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHEN-------KNRIGEARVQQLPLNRRQKVFPNG 74 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 74 (258)
+|.|...+.++.+.+|++++|.|.+.+ .+.+.|+|+|+++....... ++.+... ....
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~-------------g~~~ 72 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQK-------------GLQH 72 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCB-------------TTEE
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeC-------------CcEE
Confidence 467889999999999999999999986 77899999999887652111 2222200 0112
Q ss_pred cEEEeecccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 75 TLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 75 ~l~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
+|.|.++ +.+|+|.|+|..-+. .. .++.|.|..+|.
T Consensus 73 ~L~I~~v-~~~D~G~Y~~~~~~~---~~-ssA~L~V~~~p~ 108 (112)
T 2e6q_A 73 RLILHAV-KHQDSGALVGFSCPG---VQ-DSAALTIQESSG 108 (112)
T ss_dssp EEEEESC-CSTTCSEEEEEEETT---EE-EEEEEEEECSSC
T ss_pred EEEECCC-CHHHCccEEEEEECC---ee-EEEEEEEeCCCc
Confidence 7999999 999999998754432 22 567888887664
No 429
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.52 E-value=1.3e-13 Score=89.36 Aligned_cols=99 Identities=17% Similarity=0.266 Sum_probs=70.1
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.|.. .. ...+..+.|.|.+.|.|.|.|+|+|+|..+........ .+... .+ ......++|.|.++
T Consensus 4 pP~I~l--~~--~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~-~~~~~-----~~---~~~~~~~~L~i~~~ 70 (126)
T 1he7_A 4 PASVQL--HT--AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFT-EFLEP-----AA---NETVRHGCLRLNQP 70 (126)
T ss_dssp CCCCCC--CC--CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEE-EEECC-----CS---SCCCEEEEEEEESC
T ss_pred CCEEEc--cC--CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeE-EEeec-----cc---cccccceEEEECcC
Confidence 677622 11 34778999999999999999999999999876421110 00000 00 00011357999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
...|+|.|+|.|.|..|... ..+.|.|...|.
T Consensus 71 -~~~D~G~YtC~A~N~~G~~~-~t~~l~v~~~P~ 102 (126)
T 1he7_A 71 -THVNNGNYTLLAANPFGQAS-ASIMAAFMDNPF 102 (126)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEECCCSCTT
T ss_pred -CCCCCEEEEEEEEECCCeEE-EEEEEEEEcCCC
Confidence 99999999999999999877 788888877664
No 430
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=3.5e-14 Score=90.12 Aligned_cols=91 Identities=18% Similarity=0.215 Sum_probs=68.1
Q ss_pred CCcceeecee---eeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQ---QTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~---~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
||.+...+.. +.+.+|++++|.|.+.+.+.+ +.|+|++..+... .++.+. ......+|.|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~---~~~~~~-------------~~~~~~~L~I 69 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEES---ELLVVK-------------MDGRKHRLIL 69 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCB---TTBEEE-------------EETTEEEEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCC---CCEEEE-------------eCCCEEEEEE
Confidence 6777777777 789999999999999988888 9999999887644 111111 0001246999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
.++ +..|+|.|+|.+.|.. ..+.|.|..+|.
T Consensus 70 ~~~-~~~D~G~Y~C~a~n~~-----~~~~l~V~~~P~ 100 (104)
T 2e6p_A 70 PEA-KVQDSGEFECRTEGVS-----AFFGVTVQDPSG 100 (104)
T ss_dssp SSC-CTTTCEEEEEECSSCC-----CCEEEEEECCCC
T ss_pred CCC-ChhhCEEEEEEECCce-----EEEEEEEcCCCC
Confidence 999 9999999999998863 456677776653
No 431
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.52 E-value=1.3e-13 Score=88.84 Aligned_cols=87 Identities=17% Similarity=0.365 Sum_probs=67.0
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC---cEEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG---TLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~i 78 (258)
||.|...+.+..+.+|++++|.|.+.+. +.+.|+|++..+... .++.+ ..++ +|.|
T Consensus 19 pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~---~~~~~----------------~~~~~~~~L~I 77 (113)
T 2edh_A 19 PIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDG---DRHSL----------------RQDGARCELQI 77 (113)
T ss_dssp CCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCS---SSEEE----------------EEETTEEEEEE
T ss_pred CCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCC---CcEEE----------------EECCCEEEEEE
Confidence 5688888889999999999999999764 789999998877543 22221 1223 7999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
.++ +.+|+|.|+|.+ +... ..+.|.|..+|.
T Consensus 78 ~~v-~~~D~G~Y~C~a----~~~~-~~~~l~V~~~p~ 108 (113)
T 2edh_A 78 RGL-VAEDAGEYLCMC----GKER-TSAMLTVRAMPS 108 (113)
T ss_dssp CSC-CSTTCEEEEEEE----TTEE-EEEEEEECCCCC
T ss_pred CCC-ChhhCEEEEEEe----CCCC-EEEEEEEeCCCC
Confidence 999 999999999999 3333 677888876653
No 432
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.52 E-value=8.5e-14 Score=86.78 Aligned_cols=85 Identities=26% Similarity=0.414 Sum_probs=65.7
Q ss_pred eeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCC
Q psy14532 6 IYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDH 85 (258)
Q Consensus 6 ~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 85 (258)
+..+.+..+.+|+++.|.|.+.+ .+.+.|+|++..+... .+.. ..+++|.|.++ +.+
T Consensus 5 ~~~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~---~~~~-----------------~~~~~L~i~~~-~~~ 61 (95)
T 4hwu_A 5 GSQPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPN---NRTV-----------------LIGEYLQIKGA-TPR 61 (95)
T ss_dssp ---CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCC---SSEE-----------------EETTEEEECSC-CGG
T ss_pred ccCCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCC---ceEE-----------------EeCCEEEECcC-Ccc
Confidence 34678888999999999999886 5799999999877543 1111 12568999999 999
Q ss_pred CceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 86 DRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 86 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
|+|.|+|.+.+..+... ..+.|.|..++
T Consensus 62 D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~ 89 (95)
T 4hwu_A 62 DSGLYACTAARTVDSET-WIFMVNVTDAA 89 (95)
T ss_dssp GCEEEEEEEECSSCEEE-EEEEEEECCC-
T ss_pred cCEEEEEEEccCCCcEE-EEEEEEEeCCc
Confidence 99999999999988665 77888887653
No 433
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.51 E-value=3.5e-14 Score=90.64 Aligned_cols=86 Identities=33% Similarity=0.526 Sum_probs=69.9
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..+..++ .|.|.++.. +|+|.|+|.+.|..+. .+
T Consensus 19 ~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~n~~g~-~~ 96 (107)
T 3irg_B 19 FPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALP-TDAGVYVCRARNAAGE-AY 96 (107)
T ss_dssp CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCG-GGCEEEEEEEEETTEE-EE
T ss_pred CCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCH-HhCEEEEEEEEcCCCc-EE
Confidence 345677889999999999999999999999999888766666655555 799999997 9999999999998874 45
Q ss_pred ceEEEEeecCC
Q psy14532 195 QNVHISVTVPP 205 (258)
Q Consensus 195 ~~~~l~v~~~p 205 (258)
..+.|.|..+|
T Consensus 97 ~~~~l~V~~~P 107 (107)
T 3irg_B 97 AAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEEC--
T ss_pred EEEEEEEEcCC
Confidence 67777777654
No 434
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=8.8e-14 Score=89.96 Aligned_cols=94 Identities=21% Similarity=0.346 Sum_probs=70.2
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
|+.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..+... .++.+.. ......+|.|.++
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~---~~~~~~~------------~~~~~~~L~I~~v 77 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHAN---ELNEIDA------------QPGGYHVLTLRQL 77 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCS---SSCCBCC------------BTTTBCCBEECSC
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCC---CcEEEEE------------cCCCEEEEEEcCC
Confidence 346777888999999999999999999888899999999877654 1111110 0012347999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCee
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFV 116 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~ 116 (258)
+.+|+|.|+|.+ +... ..+.|.|..+|.+
T Consensus 78 -~~~D~G~Y~C~~----g~~~-~~~~L~V~~~p~~ 106 (115)
T 2cr6_A 78 -ALKDSGTIYFEA----GDQR-ASAALRVTEKPSV 106 (115)
T ss_dssp -CTTTCEEEEEEE----TTEE-CCEEEEEECCSSC
T ss_pred -ChhhCEEEEEEE----CCee-EEEEEEEECCCce
Confidence 999999999993 3344 6678888877643
No 435
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.51 E-value=9.7e-14 Score=104.31 Aligned_cols=125 Identities=15% Similarity=0.339 Sum_probs=86.5
Q ss_pred CCCcceecCCcEEEEeeeCccc--CceEEEEeCCc--ccC-----------------CCcceEEec-----CCeEEEEec
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP--IESITWQKGVQ--QLP-----------------LNRRQKVFP-----NGTLLIENV 172 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~~--~~~-----------------~~~~~~~~~-----~~~l~i~~~ 172 (258)
+....+.+|++++|.|.+.+.+ .+.+.|++++. ... ...++.+.. ..+|.|.++
T Consensus 33 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 33 SGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 4456788999999999997764 57899999541 110 123333332 247999999
Q ss_pred ccCCCCcEEEEEEEeCCCC----CccceEEEEeecCC---------------ccccCCCCCccCCCCeeeEEEEeccCCC
Q psy14532 173 QKDHDRGVYWCTATNKQGR----SSSQNVHISVTVPP---------------KIAPFEFQPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 173 ~~~~~~g~y~C~~~~~~~~----~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l~C~~~~~~p 233 (258)
+. +|+|.|.|.+.+..+. .......|.|..+| .+...+....+.+|++++|.|.+ .+.|
T Consensus 113 ~~-~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~ 190 (282)
T 1qok_A 113 TS-EDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSA-SSSV 190 (282)
T ss_dssp CG-GGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEE-SSCC
T ss_pred Ch-hhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEe-cCCC
Confidence 98 9999999999987541 11234567776643 12222434568899999999999 5767
Q ss_pred CceeEEEE--CCEec
Q psy14532 234 PLTISWLK--NGLPI 246 (258)
Q Consensus 234 ~~~~~W~~--~g~~l 246 (258)
+.+.|++ +|+.+
T Consensus 191 -~~v~W~k~~~g~~~ 204 (282)
T 1qok_A 191 -SYMHWFQQKPGTSP 204 (282)
T ss_dssp -SCCEEEEECTTSCC
T ss_pred -ceEEEEEECCCCCc
Confidence 8999999 66654
No 436
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.51 E-value=4.2e-14 Score=109.99 Aligned_cols=109 Identities=18% Similarity=0.239 Sum_probs=67.1
Q ss_pred eceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCc
Q psy14532 8 KFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDR 87 (258)
Q Consensus 8 ~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 87 (258)
.+.++.+.+|++++|.|.+.+ |.+.+.|++++..+...... ..+..+ .+++|.|.++ +.+|+
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~---------------~~r~~~-~~~~L~I~~v-~~~D~ 313 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGS---------------NGSVSV-RNGDLFFKKV-QVEDG 313 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCS---------------SSSEEE-ETTEEEESSC-CTTSC
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeeccc---------------CCceEe-ecCeEEEeec-CcccC
Confidence 345678999999999999998 88999999976543322100 001122 5778999999 99999
Q ss_pred eEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEE
Q psy14532 88 GVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESIT 145 (258)
Q Consensus 88 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~ 145 (258)
|.|+|.|.|..|... ..+.|.|...+ ..|+.+.|.|.+.|.|.|.|.
T Consensus 314 G~Y~C~a~N~~g~~~-~~~~l~V~~~~----------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 314 GVYTCYAMGETFNET-LSVELKVYNFT----------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEEEECSSCEEE-EEEEEEEESSC----------CC-------------------
T ss_pred EEEEEEEecCCCccE-EEEEEEEEeee----------ccCCceEEEEEeCCCCCCccc
Confidence 999999999977766 77888886432 577899999999999988763
No 437
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.51 E-value=5.8e-14 Score=88.97 Aligned_cols=87 Identities=21% Similarity=0.468 Sum_probs=66.4
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC---cEEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG---TLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~i 78 (258)
||.|...+.++.+.+|++++|.|.+.+.+.+ +.|+|++..+... .++.+ ..++ +|.|
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~---~~~~~----------------~~~~~~~~L~I 67 (103)
T 2e7b_A 8 PVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPG---DKYSL----------------RQEGAMLELVV 67 (103)
T ss_dssp CCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCS---SSEEE----------------EECSSEEEEEE
T ss_pred CCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCC---CcEEE----------------EEcCCEEEEEE
Confidence 6888888899999999999999999988888 9999998776533 12211 1223 5999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
.++ +.+|+|.|+|. .+... ..+.|.|..+|
T Consensus 68 ~~v-~~~D~G~Y~C~----~g~~~-~~~~l~V~~~p 97 (103)
T 2e7b_A 68 RNL-RPQDSGRYSCS----FGDQT-TSATLTVTALP 97 (103)
T ss_dssp CSC-CTTTCCCEEEE----CSSCB-CCBCEEEECCC
T ss_pred ccC-CcccCEEEEEE----ECCcE-EEEEEEEEecc
Confidence 999 99999999998 23333 55677777655
No 438
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.50 E-value=2.5e-14 Score=95.61 Aligned_cols=98 Identities=23% Similarity=0.409 Sum_probs=67.0
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
.||.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+..... ...............+.....+++|.|.+
T Consensus 20 ~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 96 (137)
T 3qr2_A 20 HMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICS---QLWDGARLDRVHIHATYHQHAASTISIDT 96 (137)
T ss_dssp -CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCE---ECCTTHHHHTEEEEEEESSSEEEEEEECS
T ss_pred CCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccce---eecccCcccceEEecccccccceEEEECC
Confidence 378999999999999999999999999999999999997664432200 00000000000000011112346899999
Q ss_pred cccCCCceEEEEEEEeCCccee
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSS 102 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~ 102 (258)
+ +..|+|.|+|.+.|..|...
T Consensus 97 v-~~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 97 L-VEEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp C-CGGGCEEEEEEEECCTTSSS
T ss_pred C-CcccCEEEEEEEEecCCccc
Confidence 9 99999999999999887653
No 439
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.50 E-value=8.6e-14 Score=102.94 Aligned_cols=130 Identities=20% Similarity=0.305 Sum_probs=85.6
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccC---------------CCc-ceEEecCCe--EEEEecccCCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLP---------------LNR-RQKVFPNGT--LLIENVQKDHDR 178 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~---------------~~~-~~~~~~~~~--l~i~~~~~~~~~ 178 (258)
+..+.+.+|+.++|.|.+.+.+.+.+.|++.. .... ... ++.+..+.. |.|.+++. +|+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~-~Ds 86 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANM-SQG 86 (253)
T ss_dssp CSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESC-SSC
T ss_pred CCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCCh-hhC
Confidence 34567889999999999888788899999832 1100 001 333333222 99999997 999
Q ss_pred cEEEEEEEeCCC---C--CccceEEEEeec------CCccccCC-CCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEe
Q psy14532 179 GVYWCTATNKQG---R--SSSQNVHISVTV------PPKIAPFE-FQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLP 245 (258)
Q Consensus 179 g~y~C~~~~~~~---~--~~~~~~~l~v~~------~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~ 245 (258)
|.|.|.+.+..+ . .......|.|.. +|.+...+ ....+..|+.++|.|.+.+.+|.+ .+.|+++|+.
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~ 166 (253)
T 3to4_D 87 RTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 166 (253)
T ss_dssp EEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred eEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEE
Confidence 999999986532 0 112334555553 33333221 111233478999999996557766 8999999999
Q ss_pred cccc
Q psy14532 246 ILSA 249 (258)
Q Consensus 246 l~~~ 249 (258)
+..+
T Consensus 167 l~~~ 170 (253)
T 3to4_D 167 VHSG 170 (253)
T ss_dssp ECTT
T ss_pred CCCc
Confidence 8764
No 440
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.50 E-value=1.3e-13 Score=101.56 Aligned_cols=122 Identities=15% Similarity=0.220 Sum_probs=82.1
Q ss_pred CCCcceecCCcEEEEeeeCccc-----CceEEEEeCC--cccC------------CCcceEEec---CCeEEEEecccCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP-----IESITWQKGV--QQLP------------LNRRQKVFP---NGTLLIENVQKDH 176 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~-----~~~i~W~~~~--~~~~------------~~~~~~~~~---~~~l~i~~~~~~~ 176 (258)
+..+.+.+|+.++|.|.+.+.+ .+.+.|+++. .... ...++.+.. ..+|.|.++.. +
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~ 86 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA-E 86 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG-G
T ss_pred CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCH-H
Confidence 3456788999999999998876 6899999843 2110 122333322 23699999997 9
Q ss_pred CCcEEEEEEEeCCCCCccceEEEEeecCC------------ccc-cCCCCCccCCCCeeeEEEEeccCCC--CceeEEEE
Q psy14532 177 DRGVYWCTATNKQGRSSSQNVHISVTVPP------------KIA-PFEFQPDLHSGDRAGVQCLVTKGDP--PLTISWLK 241 (258)
Q Consensus 177 ~~g~y~C~~~~~~~~~~~~~~~l~v~~~p------------~~~-~~~~~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~ 241 (258)
|+|.|.|.+.+..+........|.|..++ .+. ..+....+.+|++++|.|.+. +.+ .+.+.|++
T Consensus 87 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~k 165 (247)
T 1svz_A 87 DLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKAT-NYAFTDYSMHWVK 165 (247)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEE-SSCGGGSCEEEEE
T ss_pred HCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEc-CcccCCcEEEEEE
Confidence 99999999998754223344567776543 111 112234588999999999995 543 57899998
Q ss_pred C
Q psy14532 242 N 242 (258)
Q Consensus 242 ~ 242 (258)
+
T Consensus 166 ~ 166 (247)
T 1svz_A 166 Q 166 (247)
T ss_dssp E
T ss_pred e
Confidence 5
No 441
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.50 E-value=1.4e-13 Score=100.40 Aligned_cols=128 Identities=26% Similarity=0.347 Sum_probs=81.8
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC----------------CCcceEEec-----CCeEEEEeccc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP----------------LNRRQKVFP-----NGTLLIENVQK 174 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~----------------~~~~~~~~~-----~~~l~i~~~~~ 174 (258)
....+.+|+.++|.|.+.+.+ ...+.|++.. .... ...++.+.. +.+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 8 GAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 446788999999999987654 5789999853 2111 123444332 12799999998
Q ss_pred CCCCcEEEEEEEeCC--CC---CccceEEEEeecC----CccccCCCCCccCCC-CeeeEEEEeccCCCCc-eeEEEE-C
Q psy14532 175 DHDRGVYWCTATNKQ--GR---SSSQNVHISVTVP----PKIAPFEFQPDLHSG-DRAGVQCLVTKGDPPL-TISWLK-N 242 (258)
Q Consensus 175 ~~~~g~y~C~~~~~~--~~---~~~~~~~l~v~~~----p~~~~~~~~~~~~~g-~~~~l~C~~~~~~p~~-~~~W~~-~ 242 (258)
+|+|.|.|.+.+.. +. .......|.|... |.+........+..| +.++|.|.+.+.+|.+ .+.|++ |
T Consensus 88 -~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (232)
T 1dn0_B 88 -ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKN 166 (232)
T ss_dssp -GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETT
T ss_pred -ccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCC
Confidence 99999999998421 11 1223456777652 332221112234578 9999999996556775 999999 9
Q ss_pred CEeccc
Q psy14532 243 GLPILS 248 (258)
Q Consensus 243 g~~l~~ 248 (258)
|+.+..
T Consensus 167 g~~l~~ 172 (232)
T 1dn0_B 167 NSDISS 172 (232)
T ss_dssp SCEECC
T ss_pred CCceee
Confidence 988754
No 442
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.2e-14 Score=91.86 Aligned_cols=92 Identities=17% Similarity=0.245 Sum_probs=66.3
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCcccc-ceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHEN-KNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
||.|...+.++.+.+|+++.|.|.+.+.+ +.+.|+|++..+....... ++.+. ......+|.|.+
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~-------------~~~~~~~L~I~~ 73 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFK-------------KDGKRHILIFSD 73 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEE-------------ECSSEEEEECSS
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEE-------------ECCCEEEEEECC
Confidence 67888888999999999999999999887 8999999998775542110 11111 000123699999
Q ss_pred cccCCCceEEEEEEEeCCcceeeceEEEEEecC
Q psy14532 81 VQKDHDRGVYWCTATNKQGRSSSQNVHISVTGA 113 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~ 113 (258)
+ ..+|+|.|+|.+.+.. ..+.|.|..+
T Consensus 74 ~-~~~D~G~Y~C~a~n~~-----~~~~l~V~~~ 100 (101)
T 2edk_A 74 V-VQEDRGRYQVITNGGQ-----CEAELIVEEK 100 (101)
T ss_dssp C-CGGGCSBEEEECSSCE-----ECCBEEEECC
T ss_pred C-ChhhCEEEEEEEcCCc-----EEEEEEEeCC
Confidence 9 9999999999998621 3445666544
No 443
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.50 E-value=1.2e-13 Score=100.58 Aligned_cols=129 Identities=19% Similarity=0.296 Sum_probs=85.4
Q ss_pred CCCcceecCCcEEEEeeeCcc--cCceEEEEeCC--cccC----------------CCcceEEecC-----CeEEEEecc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGY--PIESITWQKGV--QQLP----------------LNRRQKVFPN-----GTLLIENVQ 173 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--~~~~i~W~~~~--~~~~----------------~~~~~~~~~~-----~~l~i~~~~ 173 (258)
+..+.+.+|+.++|.|.+.+. +...+.|++.. .... ...++.+..+ .+|.|.+++
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (230)
T 1ypz_F 8 EISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLE 87 (230)
T ss_dssp CSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCC
T ss_pred CCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCC
Confidence 445678899999999999764 56789999843 2110 1233333321 269999999
Q ss_pred cCCCCcEEEEEEEeC--CC-CCccceEEEEeec---------CCccccC-CCCCccCCCCeeeEEEEeccCCCC-ceeEE
Q psy14532 174 KDHDRGVYWCTATNK--QG-RSSSQNVHISVTV---------PPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPP-LTISW 239 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~--~~-~~~~~~~~l~v~~---------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W 239 (258)
. +|+|.|.|.+.+. .. ........|.|.. +|.+.+. +....+..|+.++|.|.+.+.+|. +.|.|
T Consensus 88 ~-~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W 166 (230)
T 1ypz_F 88 E-EDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYW 166 (230)
T ss_dssp G-GGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEE
T ss_pred h-hhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEE
Confidence 7 9999999999874 11 1122345677752 2333222 222234568899999999655675 69999
Q ss_pred EE-CCEeccc
Q psy14532 240 LK-NGLPILS 248 (258)
Q Consensus 240 ~~-~g~~l~~ 248 (258)
++ ||+.+..
T Consensus 167 ~~~~g~~l~~ 176 (230)
T 1ypz_F 167 KEKDGNTILD 176 (230)
T ss_dssp ECTTSSCBCC
T ss_pred EccCCeEccc
Confidence 99 8887753
No 444
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.50 E-value=1.2e-13 Score=86.02 Aligned_cols=87 Identities=20% Similarity=0.286 Sum_probs=63.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
.|.|...+.++.+.+|+++.|.|.+ +.+.+.+.|+|++..+... .++.+. ......+|.|.++
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~---~~~~~~-------------~~~~~~~L~I~~v 70 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISAS---NKYGLA-------------TEGTRHTLTVREV 70 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSS---TTCEEE-------------EETTEEEEEESSC
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCC---CcEEEE-------------EcCCEEEEEEcCC
Confidence 3677788899999999999999999 6778899999998877543 121111 0001236999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVT 111 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 111 (258)
+..|+|.|+|.+ +... ..+.|.|.
T Consensus 71 -~~~D~G~Y~C~a----g~~~-~~~~l~V~ 94 (95)
T 2k1m_A 71 -GPADQGSYAVIA----GSSK-VKFDLKVI 94 (95)
T ss_dssp -CTTCCSEEEEEE----TTEE-EEEEEEEE
T ss_pred -CcccCEEEEEEE----CCce-EEEEEEEe
Confidence 999999999999 3333 45666654
No 445
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.49 E-value=2.4e-13 Score=100.80 Aligned_cols=121 Identities=17% Similarity=0.312 Sum_probs=82.4
Q ss_pred CCCcceecCCcEEEEeeeCcc--cCceEEEEeCC--ccc----------------CCCcceEEecC-----CeEEEEecc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGY--PIESITWQKGV--QQL----------------PLNRRQKVFPN-----GTLLIENVQ 173 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--~~~~i~W~~~~--~~~----------------~~~~~~~~~~~-----~~l~i~~~~ 173 (258)
+....+.+|+.++|.|.+.+. +.+.+.|++.. ... ....++.+..+ .+|.|.+++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 94 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS 94 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC
Confidence 345568899999999999873 47799999842 111 01123333321 269999999
Q ss_pred cCCCCcEEEEEEEeCCCC---CccceEEEEeecC--------------CccccCCCCCccCCCCeeeEEEEeccCCCCc-
Q psy14532 174 KDHDRGVYWCTATNKQGR---SSSQNVHISVTVP--------------PKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL- 235 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~~---~~~~~~~l~v~~~--------------p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~- 235 (258)
. +|+|.|+|.+.+..+. .......|.|..+ +.+...+....+.+|++++|.|.+ .+.+.+
T Consensus 95 ~-~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~~~~~~~ 172 (257)
T 3gkz_A 95 S-EDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSA-SSSVSSS 172 (257)
T ss_dssp G-GGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEE-SSCCCGG
T ss_pred h-hhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEE-ccCccce
Confidence 7 9999999999986211 1234456777654 333334445678899999999999 466666
Q ss_pred eeEEEE
Q psy14532 236 TISWLK 241 (258)
Q Consensus 236 ~~~W~~ 241 (258)
.+.|++
T Consensus 173 ~v~W~k 178 (257)
T 3gkz_A 173 HLYWYQ 178 (257)
T ss_dssp GEEEEE
T ss_pred EEEEEE
Confidence 999998
No 446
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.49 E-value=2.1e-13 Score=101.02 Aligned_cols=120 Identities=17% Similarity=0.233 Sum_probs=83.4
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccC-------------CCcceEEe-----cCCeEEEEecccCCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLP-------------LNRRQKVF-----PNGTLLIENVQKDHDR 178 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~-------------~~~~~~~~-----~~~~l~i~~~~~~~~~ 178 (258)
+..+.+.+|++++|.|.+.+.+.+.+.|++.. .... ...++.+. ...+|.|.++.. +|+
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~-~Ds 88 (256)
T 3tf7_C 10 DARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHR-SDS 88 (256)
T ss_dssp CSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCG-GGC
T ss_pred CceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCc-ccC
Confidence 44567889999999999988888999999842 1110 11222221 123699999997 999
Q ss_pred cEEEEEEEeCCCCC---ccceEEEEeec--------------------CCccccCCCCCccCCCCeeeEEEEeccCCCCc
Q psy14532 179 GVYWCTATNKQGRS---SSQNVHISVTV--------------------PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL 235 (258)
Q Consensus 179 g~y~C~~~~~~~~~---~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 235 (258)
|.|.|.+.+..+.. ......|.|.. +|.+...+....+.+|+.++|.|.+. +. .+
T Consensus 89 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~-~~-~~ 166 (256)
T 3tf7_C 89 AVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQT-NS-HN 166 (256)
T ss_dssp SEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEEC-SC-CS
T ss_pred EEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcC-CC-ce
Confidence 99999999875321 22345566654 33444445555677899999999995 44 57
Q ss_pred eeEEEE
Q psy14532 236 TISWLK 241 (258)
Q Consensus 236 ~~~W~~ 241 (258)
.+.|++
T Consensus 167 ~v~W~k 172 (256)
T 3tf7_C 167 YMYWYR 172 (256)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 899998
No 447
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=2.1e-13 Score=86.34 Aligned_cols=88 Identities=16% Similarity=0.338 Sum_probs=67.6
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC---cEEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG---TLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~i 78 (258)
||.|...+.++.+.+|++++|.|.+ +.+.+.+.|+|++..+... .++.+ ..++ +|.|
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~---~~~~~----------------~~~~~~~~L~I 67 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRAS---GKHQP----------------SQEGLTLRLTI 67 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSS---SSEEE----------------EEETTEEEEEE
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCC---CeEEE----------------EeCCCEEEEEE
Confidence 6888888899999999999999994 7788899999998877544 12211 1223 7999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
.++ +.+|+|.|+|. .+... ..+.|.|...+.
T Consensus 68 ~~v-~~~D~G~Y~C~----~g~~~-~~~~l~V~~~p~ 98 (103)
T 2dku_A 68 SAL-EKADSDTYTCD----IGQAQ-SRAQLLVQGRRS 98 (103)
T ss_dssp ESC-CTTTCSEEEEE----CSSCB-CCEEEEEECSCC
T ss_pred CCC-CcccCEEEEEE----eCCce-EEEEEEEeCccC
Confidence 999 99999999998 34444 567788876553
No 448
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.49 E-value=2.1e-13 Score=100.75 Aligned_cols=130 Identities=21% Similarity=0.378 Sum_probs=86.6
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCc--cc---------------CCCcceEEec----CCeEEEEecccCCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQ--QL---------------PLNRRQKVFP----NGTLLIENVQKDHD 177 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~--~~---------------~~~~~~~~~~----~~~l~i~~~~~~~~ 177 (258)
+..+.+.+|+.++|.|.+.. +.+.+.|+++.. .. ....++.+.. +..|.|.+++. +|
T Consensus 10 p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~-~D 87 (252)
T 1oga_E 10 PKYLFRKEGQNVTLSCEQNL-NHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQK-NP 87 (252)
T ss_dssp CSEEEEETTCCEEECCEECS-CCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCS-CC
T ss_pred CCeEEEcCCCcEEEEEEeCC-CCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCCh-hh
Confidence 44567899999999999853 567999998531 11 0123344332 24799999997 99
Q ss_pred CcEEEEEEEeCCC--CCccceEEEEeec------CCccccC-CCCCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecc
Q psy14532 178 RGVYWCTATNKQG--RSSSQNVHISVTV------PPKIAPF-EFQPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPIL 247 (258)
Q Consensus 178 ~g~y~C~~~~~~~--~~~~~~~~l~v~~------~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~ 247 (258)
+|.|.|.+.+... ........|.|.. +|.+... +....+..|+.++|.|.+.+.+|. +.|.|+++|+.+.
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~ 167 (252)
T 1oga_E 88 TAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 167 (252)
T ss_dssp CEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 9999999998621 0112234456543 3444332 222234468999999999655575 5999999999987
Q ss_pred ccc
Q psy14532 248 SAM 250 (258)
Q Consensus 248 ~~~ 250 (258)
.+.
T Consensus 168 ~~~ 170 (252)
T 1oga_E 168 SGV 170 (252)
T ss_dssp SSE
T ss_pred CCc
Confidence 643
No 449
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.49 E-value=1.9e-13 Score=82.76 Aligned_cols=77 Identities=26% Similarity=0.412 Sum_probs=62.2
Q ss_pred CCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCccce
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSSQN 196 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~ 196 (258)
..+.+.+|+.+.|.|.+.+ |.+.+.|++++..+....++.+...+ .|.|.++.. +|+|.|+|.|.+ .+..
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~n-----~~~~ 76 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARS-GDAGEYLCDAPQ-----DSRI 76 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSS-TTCEEEEEECTT-----TCEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCC-cccEEEEEEECC-----EEEE
Confidence 4567889999999999976 88899999999999887777665544 699999997 999999999854 3455
Q ss_pred EEEEeec
Q psy14532 197 VHISVTV 203 (258)
Q Consensus 197 ~~l~v~~ 203 (258)
+.|.|..
T Consensus 77 a~l~V~e 83 (84)
T 2lu7_A 77 FLVSVEE 83 (84)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 6676654
No 450
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.48 E-value=2e-13 Score=106.75 Aligned_cols=124 Identities=13% Similarity=0.196 Sum_probs=85.8
Q ss_pred eecCCcEEEEeeeCcc---cC-ceEEEEeCCcccCCCc--------ceEEecCCeEEEEecccCCCCcEEEEEEEeCCCC
Q psy14532 124 AIAGEPLYLGCPVAGY---PI-ESITWQKGVQQLPLNR--------RQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGR 191 (258)
Q Consensus 124 ~~~g~~~~l~C~~~~~---~~-~~i~W~~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~ 191 (258)
+..|+.++|.|.+.+. |. ..|.|++++..+.... .........|.|..+.. +|.|.|+|.+.+....
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~-~D~g~Y~C~~~~~~~~ 258 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDW-LNGKEFKCRVNSAAFP 258 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhc-cCCCEEEEEEecCCCC
Confidence 6789999999999886 32 3799999886542111 00111223688888876 9999999999987652
Q ss_pred C-ccceEEE--EeecCCccccCCCCCccCCCCeeeEEEEeccCCC-CceeEEEECCEeccc
Q psy14532 192 S-SSQNVHI--SVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDP-PLTISWLKNGLPILS 248 (258)
Q Consensus 192 ~-~~~~~~l--~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~l~~ 248 (258)
. ....+.+ .+..+|.+.+.+.......|+.++|.|.+.+.+| .+.|.|++||+.+..
T Consensus 259 ~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~ 319 (376)
T 2aty_A 259 APIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAEN 319 (376)
T ss_pred CceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCC
Confidence 2 1222222 3445676666655555566999999999965455 579999999998754
No 451
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.48 E-value=2.9e-13 Score=100.29 Aligned_cols=123 Identities=15% Similarity=0.334 Sum_probs=85.2
Q ss_pred ccCCCcceecCCcEEEEeeeCc--ccCceEEEEeCC--cccC-----------------CCcceEEecC-----CeEEEE
Q psy14532 117 RPMGNVSAIAGEPLYLGCPVAG--YPIESITWQKGV--QQLP-----------------LNRRQKVFPN-----GTLLIE 170 (258)
Q Consensus 117 ~~~~~~~~~~g~~~~l~C~~~~--~~~~~i~W~~~~--~~~~-----------------~~~~~~~~~~-----~~l~i~ 170 (258)
..+..+.+.+|++++|.|.+.+ .+.+.+.|++.. .... ...++.+..+ .+|.|.
T Consensus 11 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 90 (256)
T 3juy_B 11 VQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELR 90 (256)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEEC
Confidence 3456778899999999999977 367799999742 1110 1123333311 259999
Q ss_pred ecccCCCCcEEEEEEEeC-----------CCCCccceEEEEeecCC---------------ccccCCCCCccCCCCeeeE
Q psy14532 171 NVQKDHDRGVYWCTATNK-----------QGRSSSQNVHISVTVPP---------------KIAPFEFQPDLHSGDRAGV 224 (258)
Q Consensus 171 ~~~~~~~~g~y~C~~~~~-----------~~~~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~g~~~~l 224 (258)
+++. +|+|.|.|.+.+. ..........|.|...+ .+...+....+.+|++++|
T Consensus 91 ~v~~-~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L 169 (256)
T 3juy_B 91 SLRS-ADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATF 169 (256)
T ss_dssp SCCG-GGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEE
T ss_pred CCCc-ccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEE
Confidence 9997 9999999999986 11122345567776632 2333355567889999999
Q ss_pred EEEeccCCCC-ceeEEEE
Q psy14532 225 QCLVTKGDPP-LTISWLK 241 (258)
Q Consensus 225 ~C~~~~~~p~-~~~~W~~ 241 (258)
.|.+. +.|. +.+.|++
T Consensus 170 ~C~~~-~~~~~~~v~W~k 186 (256)
T 3juy_B 170 SCRSS-HSIRSRRVAWYQ 186 (256)
T ss_dssp EEEES-SCCTTCCEEEEE
T ss_pred EEEEC-CCcCCeeEEEEE
Confidence 99994 5555 8999998
No 452
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.48 E-value=1.6e-13 Score=99.39 Aligned_cols=126 Identities=21% Similarity=0.463 Sum_probs=83.5
Q ss_pred CCcceecCCcEEEEeeeCcc--cCceEEEEeCCc--ccC-------------------CCcceEEecC-----CeEEEEe
Q psy14532 120 GNVSAIAGEPLYLGCPVAGY--PIESITWQKGVQ--QLP-------------------LNRRQKVFPN-----GTLLIEN 171 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~--~~~~i~W~~~~~--~~~-------------------~~~~~~~~~~-----~~l~i~~ 171 (258)
....+.+|+.++|.|.+.+. +...+.|++... ... ...++.+..+ .+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 34668899999999999763 367899998431 110 1123333222 2599999
Q ss_pred cccCCCCcEEEEEEEeCCC-CCccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCC--ceeEEEECCE
Q psy14532 172 VQKDHDRGVYWCTATNKQG-RSSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPP--LTISWLKNGL 244 (258)
Q Consensus 172 ~~~~~~~g~y~C~~~~~~~-~~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~~~W~~~g~ 244 (258)
++. +|+|.|.|.+.+... ........|.|.. +|.+........ ..|+.++|.|.+.++.|. +.+.|+++|+
T Consensus 88 v~~-~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~ 165 (221)
T 3m8o_H 88 LKS-DDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVTWSESGQ 165 (221)
T ss_dssp CCG-GGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEEESCCST
T ss_pred CCH-HHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEEEEECCE
Confidence 998 999999999998631 2233445666653 232221111222 689999999999654776 5999999998
Q ss_pred ecc
Q psy14532 245 PIL 247 (258)
Q Consensus 245 ~l~ 247 (258)
.+.
T Consensus 166 ~~~ 168 (221)
T 3m8o_H 166 GVT 168 (221)
T ss_dssp TCE
T ss_pred ECc
Confidence 773
No 453
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.22 E-value=2.7e-15 Score=104.78 Aligned_cols=172 Identities=10% Similarity=0.033 Sum_probs=94.8
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCC--EeCcCCccccceecccceeeccccccc-eeeeeCCcEEEeec
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDG--YPLAGDRHENKNRIGEARVQQLPLNRR-QKVFPNGTLLIENV 81 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~ 81 (258)
+.+.+..+.+.+|++|+|.|.+.+.+...+.|||.. .....-....... ... ...++... .....+.+|.|.++
T Consensus 3 v~Q~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~-~~~--~~~R~s~~~~~~~~~~sL~I~~v 79 (185)
T 3c6l_A 3 VRQSPQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVS-NKK--EDGRFTIFFNKREKKFSLHIADS 79 (185)
Confidence 456678889999999999999876555689999853 2111000000000 000 01111110 01123457999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecC-----CeeccCCCcceecCCcEEEEeeeCc-ccCceEEEEeCCcccCC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGA-----PFVRPMGNVSAIAGEPLYLGCPVAG-YPIESITWQKGVQQLPL 155 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~-----~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~i~W~~~~~~~~~ 155 (258)
+.+|+|.|.|.+.+... .......|.|... |.+..... ..+.++|.|.+.+ +|.++|.|..+......
T Consensus 80 -~~~DsG~Y~C~~~~~~~-~fg~gT~L~V~~~~~~~~P~V~~~~~----~~~~vtL~C~~~gf~P~p~v~~~~~~~~~~~ 153 (185)
T 3c6l_A 80 -QPGDSATYFCAASDNRI-FFGDGTQLVVKPNIQNPEPAVYQLKD----PRSQDSTLCLFTDFDSQINVPKTMESGTFIT 153 (185)
Confidence 99999999999876211 1112234555432 22222111 1237899999988 78999999877665543
Q ss_pred CcceEEecCCeEEEEecccCCCCcEEEEEE
Q psy14532 156 NRRQKVFPNGTLLIENVQKDHDRGVYWCTA 185 (258)
Q Consensus 156 ~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~ 185 (258)
.....-...-.+.+..+...++.-.+.|+-
T Consensus 154 ~~~~~~~~~~~~~~~~~~~w~~~~~~~c~~ 183 (185)
T 3c6l_A 154 DKTVLDMKAMDSKSNGAIAWSNQTSFTCQD 183 (185)
Confidence 332221111123333343335555788853
No 454
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.48 E-value=7.1e-14 Score=103.42 Aligned_cols=126 Identities=23% Similarity=0.416 Sum_probs=78.0
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~~ 173 (258)
....+.+|+.++|.|.+.+.+ .+.+.|++.. .... ...++.+.. ...|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 8 GGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 345788999999999998754 5789999853 1110 122333322 2379999999
Q ss_pred cCCCCcEEEEEEEeCCCC------------CccceEEEEeec----CCccccCCCCCccCCCCeeeEEEEeccCCCCc-e
Q psy14532 174 KDHDRGVYWCTATNKQGR------------SSSQNVHISVTV----PPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-T 236 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~~------------~~~~~~~l~v~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~ 236 (258)
. +|+|.|.|.+.+..+. .......|.|.. +|.+........+..|+.++|.|.+.+.+|.+ .
T Consensus 88 ~-~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~ 166 (257)
T 3bn9_D 88 A-EDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 166 (257)
T ss_dssp G-GGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCE
T ss_pred h-hhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcE
Confidence 7 9999999999986531 112335677764 34333322222356799999999996555776 9
Q ss_pred eEEEECCEec
Q psy14532 237 ISWLKNGLPI 246 (258)
Q Consensus 237 ~~W~~~g~~l 246 (258)
|.|+++|..+
T Consensus 167 v~W~k~g~~~ 176 (257)
T 3bn9_D 167 VSWNSGALTS 176 (257)
T ss_dssp EEETTTTCCS
T ss_pred EEEeeCCCcC
Confidence 9999998864
No 455
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.48 E-value=8.2e-14 Score=91.12 Aligned_cols=99 Identities=20% Similarity=0.273 Sum_probs=66.3
Q ss_pred eeeeecCCCceEEEEEEeec--CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccCCCc
Q psy14532 10 IQQTLQPGPPVSLKCIATGN--PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKDHDR 87 (258)
Q Consensus 10 ~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~ 87 (258)
..+.+.+|+++.|.|.+.+. +.+.+.|++++..+........ . . ............++|.|.++ +.+|+
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~---~--~---~~~~~~~~~~~~~~L~I~~v-~~~Ds 86 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNR---D--L---KTQSGSEMKKFLSTLTIDGV-TRSDQ 86 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCC---S--C---CEEEETTEEEEEEEEEESSC-CGGGC
T ss_pred CCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeee---c--c---ccccCCceeeEEEEEEECCC-CcccC
Confidence 33488999999999999984 4568999998764321100000 0 0 00000011123457999999 99999
Q ss_pred eEEEEEEEeCCcceeeceEEEEEecCCeecc
Q psy14532 88 GVYWCTATNKQGRSSSQNVHISVTGAPFVRP 118 (258)
Q Consensus 88 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~ 118 (258)
|.|+|.+.|..|... ..+.|.|..+|.+..
T Consensus 87 G~Y~C~a~n~~g~~~-~~~~l~V~~~p~i~~ 116 (122)
T 3s35_X 87 GLYTCAASSGLMTKK-NSTFVRVHEKPFVAF 116 (122)
T ss_dssp EEEEEEEECSSCEEE-EEEEEEEEEEECC--
T ss_pred EEEEEEEccCCCceE-EEEEEEEeccCeEEe
Confidence 999999999988777 888999988776543
No 456
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.48 E-value=3.7e-13 Score=100.17 Aligned_cols=122 Identities=16% Similarity=0.270 Sum_probs=83.8
Q ss_pred CCCcceecCCcEEEEeeeCccc------CceEEEEeCC--cccC------------CCcceEEec---CCeEEEEecccC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP------IESITWQKGV--QQLP------------LNRRQKVFP---NGTLLIENVQKD 175 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~------~~~i~W~~~~--~~~~------------~~~~~~~~~---~~~l~i~~~~~~ 175 (258)
+..+.+.+|+.++|.|.+.+.+ .+.+.|+++. ..+. ...++.+.. ..+|.|.++..
T Consensus 12 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~- 90 (264)
T 2gjj_A 12 PSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKA- 90 (264)
T ss_dssp CSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG-
T ss_pred CCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCH-
Confidence 4456788999999999998876 6789999852 2211 123333322 23799999997
Q ss_pred CCCcEEEEEEEeCCCCCccceEEEEeecCC------------------cccc-CCCCCccCCCCeeeEEEEeccCCC--C
Q psy14532 176 HDRGVYWCTATNKQGRSSSQNVHISVTVPP------------------KIAP-FEFQPDLHSGDRAGVQCLVTKGDP--P 234 (258)
Q Consensus 176 ~~~g~y~C~~~~~~~~~~~~~~~l~v~~~p------------------~~~~-~~~~~~~~~g~~~~l~C~~~~~~p--~ 234 (258)
+|+|.|.|.+.+..+........|.|..+| .+.. .+....+.+|++++|.|.+. +.+ .
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~~~~~~ 169 (264)
T 2gjj_A 91 EDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKAS-GYSFTG 169 (264)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEE-SSCGGG
T ss_pred HHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEe-CCccCC
Confidence 999999999998653222344567776653 1111 12234688999999999995 554 3
Q ss_pred ceeEEEEC
Q psy14532 235 LTISWLKN 242 (258)
Q Consensus 235 ~~~~W~~~ 242 (258)
+.+.|+++
T Consensus 170 ~~v~W~r~ 177 (264)
T 2gjj_A 170 YFINWVKK 177 (264)
T ss_dssp SEEEEEEE
T ss_pred eEEEEEEE
Confidence 79999985
No 457
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=4.8e-13 Score=86.90 Aligned_cols=83 Identities=22% Similarity=0.343 Sum_probs=67.1
Q ss_pred CCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEe-cC--CeEEEEecccCCCCcEEEEEEEeCCCCCccce
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVF-PN--GTLLIENVQKDHDRGVYWCTATNKQGRSSSQN 196 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~-~~--~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~ 196 (258)
....+.+|+.+.|.|.+.|.|.+.+.|++++..+.. .+..+. .. ..|.|.++.. +|+|.|+|.+.|..+ ..+..
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~-~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~N~~G-~~~~~ 108 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDT-SRVHVRTSDFDTVFFVRQAAR-SDSGEYELSVQIENM-KDTAT 108 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCC-SSCEEEECSSEEEEEESSCCT-TTCEEEEEEEECSSC-EECCE
T ss_pred CCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCC-CcEEEEECCCeEEEEECCCCh-hcCEEEEEEEEeCCC-eEEEE
Confidence 456788999999999999999999999999988763 233332 22 3499999997 999999999999988 46677
Q ss_pred EEEEeecCC
Q psy14532 197 VHISVTVPP 205 (258)
Q Consensus 197 ~~l~v~~~p 205 (258)
+.|.|..+|
T Consensus 109 ~~l~V~~~P 117 (118)
T 2e7c_A 109 IRIRVVEKA 117 (118)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEcCC
Confidence 888887765
No 458
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=8.6e-14 Score=87.48 Aligned_cols=81 Identities=28% Similarity=0.482 Sum_probs=64.4
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVH 198 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 198 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.............|.|.++.. +|+|.|+|.+.|..+. .+..+.
T Consensus 18 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~-~~~~~~ 95 (99)
T 2yr3_A 18 LKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALP-EDHGTYTCLAENALGQ-VSCSAW 95 (99)
T ss_dssp CCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCT-TCCBCEEEEEECSSCE-EEEECC
T ss_pred CCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCCh-hhCEEEEEEEEECCCe-EEEEEE
Confidence 45667889999999999999999999999999887765544434446799999997 9999999999999874 344444
Q ss_pred EEe
Q psy14532 199 ISV 201 (258)
Q Consensus 199 l~v 201 (258)
|.|
T Consensus 96 l~V 98 (99)
T 2yr3_A 96 VTV 98 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 459
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.47 E-value=2e-13 Score=86.49 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=67.9
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecC---CeEEEEecccCCCCcEEEEEEEeCCCCCccc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRSSSQ 195 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~ 195 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+... ..|.|.++.. +|+|.|+|.+.|..+. .+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~N~~G~-~~~ 92 (103)
T 3qp3_A 15 MRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHT-DDSGTYRAVCTNYKGE-ASD 92 (103)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEEETTEE-EEE
T ss_pred CcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCc-ccCEEEEEEEEeCCCc-EEE
Confidence 4567788999999999999999999999999988876665555432 2699999997 9999999999999874 456
Q ss_pred eEEEEeecC
Q psy14532 196 NVHISVTVP 204 (258)
Q Consensus 196 ~~~l~v~~~ 204 (258)
.+.|.|...
T Consensus 93 ~~~l~V~~~ 101 (103)
T 3qp3_A 93 YATLDVTGG 101 (103)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 667776643
No 460
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.47 E-value=2.1e-13 Score=106.13 Aligned_cols=104 Identities=20% Similarity=0.246 Sum_probs=66.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCC----cceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLN----RRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~----~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
+....+.+|+.+.|.|.+.| |.+.+.|++++..+... .++.+ .+++|.|.+++. +|+|.|+|.|.|..+ ..+
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~-~D~G~Y~C~a~N~~g-~~~ 328 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQV-EDGGVYTCYAMGETF-NET 328 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCT-TSCEEEEEEEECSSC-EEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCc-ccCEEEEEEEecCCC-ccE
Confidence 34567889999999999999 98999999977654322 24555 778999999997 999999999999976 455
Q ss_pred ceEEEEeecCCccccCCCCCccCCCCeeeEEEEeccCCCCceeE
Q psy14532 195 QNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPLTIS 238 (258)
Q Consensus 195 ~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 238 (258)
..+.|.|...+ ..|+.++|.|.+ .|.|.|.|.
T Consensus 329 ~~~~l~V~~~~-----------~~g~~~~l~C~~-~g~P~P~i~ 360 (361)
T 2xot_A 329 LSVELKVYNFT-----------LHGHHDTLNAAA-DPWSHPQFE 360 (361)
T ss_dssp EEEEEEEESSC-----------CC--------------------
T ss_pred EEEEEEEEeee-----------ccCCceEEEEEe-CCCCCCccc
Confidence 66677775422 568899999999 688888763
No 461
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=5.6e-13 Score=85.87 Aligned_cols=91 Identities=20% Similarity=0.261 Sum_probs=66.1
Q ss_pred CCcceeecee---eeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQ---QTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~---~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
||.+...+.. +.+.+|+++.|.|.+. .|.+.+.|+|++..+... .++.+.. .....+|.|
T Consensus 10 pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~---~~~~~~~-------------~~~~~~L~I 72 (113)
T 2cpc_A 10 VSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVES---PALLLQK-------------EDTVRRLVL 72 (113)
T ss_dssp CSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCB---TTBEEEE-------------CSSEEEEEE
T ss_pred CCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccC---CCEEEEE-------------CCCEEEEEE
Confidence 4555555544 6788999999999996 678899999999887653 1211110 001247999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
.++ +.+|+|.|+|.+.| . +..+.|.|..+|.
T Consensus 73 ~~v-~~~D~G~Y~C~a~n----~-~~~~~l~V~~~p~ 103 (113)
T 2cpc_A 73 PAV-QLEDSGEYLCEIDD----E-SASFTVTVTEPPV 103 (113)
T ss_dssp SSC-CTTTCEEEEEESSS----C-EEEEEEEEECCCC
T ss_pred CCC-CcccCEEEEEEEec----C-cEEEEEEEecCCc
Confidence 999 99999999999987 2 2677888887764
No 462
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.47 E-value=4.4e-13 Score=99.24 Aligned_cols=122 Identities=15% Similarity=0.275 Sum_probs=80.9
Q ss_pred CCCcceecCCcEEEEeeeCcc--cCceEEEEeCC--cccC------------CCcceEEecC---CeEEEEecccCCCCc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGY--PIESITWQKGV--QQLP------------LNRRQKVFPN---GTLLIENVQKDHDRG 179 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~--~~~~i~W~~~~--~~~~------------~~~~~~~~~~---~~l~i~~~~~~~~~g 179 (258)
+....+.+|+.++|.|.+.+. +.+.+.|+++. .... ...++.+... .+|.|.+++. +|+|
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~DsG 87 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQS-EDEA 87 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCG-GGCE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCCh-hhCE
Confidence 345678899999999999876 67899999853 1111 1123332222 2699999997 9999
Q ss_pred EEEEEEEeCCCC--CccceEEEEeecCCcc-------------------cc-CCCCCccCCCCeeeEEEEeccCCC--Cc
Q psy14532 180 VYWCTATNKQGR--SSSQNVHISVTVPPKI-------------------AP-FEFQPDLHSGDRAGVQCLVTKGDP--PL 235 (258)
Q Consensus 180 ~y~C~~~~~~~~--~~~~~~~l~v~~~p~~-------------------~~-~~~~~~~~~g~~~~l~C~~~~~~p--~~ 235 (258)
.|.|.+.+..+. .......|.|..++.. .. .+....+.+|++++|.|.+. +.+ .+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~~~~~~~ 166 (256)
T 3ux9_B 88 DYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAAS-GFTFSSY 166 (256)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEE-SSCGGGS
T ss_pred EEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEe-CCccccc
Confidence 999999986431 1234456777665421 11 12234588999999999994 544 68
Q ss_pred eeEEEEC
Q psy14532 236 TISWLKN 242 (258)
Q Consensus 236 ~~~W~~~ 242 (258)
.+.|+++
T Consensus 167 ~v~W~r~ 173 (256)
T 3ux9_B 167 AMSWVRQ 173 (256)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999985
No 463
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=4e-13 Score=85.04 Aligned_cols=77 Identities=16% Similarity=0.231 Sum_probs=57.3
Q ss_pred CCcceeecee-eeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQ-QTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~-~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
+|.|...+.+ +.+.+|+++.|.|.+ +.|.+.+.|+|++..+.... .++.+. ......+|.|.+
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~--~~~~~~-------------~~~~~~~L~I~~ 78 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSG--SKYIFE-------------SIGAKRTLTISQ 78 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCS--SSSEEE-------------EETTEEEEEECS
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCC--CeEEEE-------------ecCCEEEEEECC
Confidence 6778777776 789999999999999 67888999999988765431 111111 000112799999
Q ss_pred cccCCCceEEEEEEE
Q psy14532 81 VQKDHDRGVYWCTAT 95 (258)
Q Consensus 81 ~~~~~d~G~Y~C~~~ 95 (258)
+ +.+|+|.|+|.+.
T Consensus 79 v-~~~D~G~Y~C~a~ 92 (104)
T 1pd6_A 79 C-SLADDAAYQCVVG 92 (104)
T ss_dssp C-SSSSCEEEEEEET
T ss_pred C-CcccCEEEEEEEC
Confidence 9 9999999999993
No 464
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.46 E-value=3.4e-13 Score=86.12 Aligned_cols=87 Identities=17% Similarity=0.363 Sum_probs=65.7
Q ss_pred CCCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCC---cEE
Q psy14532 1 SHPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNG---TLL 77 (258)
Q Consensus 1 ~~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~ 77 (258)
.||.|...+.++.+.+|++++|.|.+.+. +.+.|+|++..+... .++.+ ..++ +|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~---~~~~~----------------~~~~~~~~L~ 65 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDG---GRYSL----------------KQDGTRCELQ 65 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSS---SSCEE----------------EEETTEEEEE
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCC---CCEEE----------------EecCCEEEEE
Confidence 37888888899999999999999998764 689999998776533 22211 1223 499
Q ss_pred EeecccCCCceEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 78 IENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 78 i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
|.++ +.+|+|.|+|.+.+ .. ..+.|.|..+|
T Consensus 66 I~~v-~~~D~G~Y~C~a~n----~~-~~~~l~V~~~p 96 (108)
T 2dm7_A 66 IHDL-SVADAGEYSCMCGQ----ER-TSATLTVRALP 96 (108)
T ss_dssp ESSC-CTTTCSEEEEEETT----EE-EEEECEEECCC
T ss_pred ECCC-CcccCEEEEEEEcC----CE-EEEEEEEecCC
Confidence 9999 99999999999943 22 56677777654
No 465
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=2.2e-13 Score=85.60 Aligned_cols=83 Identities=19% Similarity=0.266 Sum_probs=65.6
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEe--cCC--eEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVF--PNG--TLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~--~~~--~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
.+....+..|+.+.|.|.+.|.|.+.+.|++++..+....+.... ..+ .|.|.++.. +|+|.|+|.+.|..+. .
T Consensus 11 ~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~-~ 88 (99)
T 1g1c_A 11 RIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTG-EDSASIMVKAINIAGE-T 88 (99)
T ss_dssp CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCG-GGCEEEEEEEEETTEE-E
T ss_pred cCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCc-CCCEEEEEEEEECCCc-E
Confidence 345677899999999999999999999999999888765544432 223 699999997 9999999999999874 4
Q ss_pred cceEEEEee
Q psy14532 194 SQNVHISVT 202 (258)
Q Consensus 194 ~~~~~l~v~ 202 (258)
...+.|.|.
T Consensus 89 ~~~~~l~V~ 97 (99)
T 1g1c_A 89 SSHAFLLVQ 97 (99)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 455666664
No 466
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.46 E-value=1.8e-13 Score=84.89 Aligned_cols=81 Identities=19% Similarity=0.247 Sum_probs=62.3
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC--cccCCCcceEEe-cCCeEEEEecccCCCCcEEEEEEEeCCCCCccc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV--QQLPLNRRQKVF-PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQ 195 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~--~~~~~~~~~~~~-~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~ 195 (258)
+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+......... ....|.|.++.. +|+|.|+|.|.|..| ..+.
T Consensus 9 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~N~~G-~~~~ 86 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKR-ADSGNYKLKVKNELG-EDEA 86 (93)
T ss_dssp CCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCG-GGCEEEEEEEEETTE-EEEE
T ss_pred CCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCCh-hcCEEEEEEEEcCCC-eEEE
Confidence 45567889999999999999999999999999 766544322221 224688999997 999999999999987 3445
Q ss_pred eEEEEe
Q psy14532 196 NVHISV 201 (258)
Q Consensus 196 ~~~l~v 201 (258)
.+.|.|
T Consensus 87 ~~~l~V 92 (93)
T 1wit_A 87 IFEVIV 92 (93)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555554
No 467
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.45 E-value=2.1e-13 Score=85.84 Aligned_cols=84 Identities=25% Similarity=0.412 Sum_probs=66.4
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcc--eEEecCC--eEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRR--QKVFPNG--TLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~--~~~~~~~--~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... .....++ .|.|.++.. +|+|.|+|.+.|..+. .+
T Consensus 12 p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~-~~ 89 (100)
T 2kdg_A 12 PENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRA-SDAGAYACVAKNRAGE-AT 89 (100)
T ss_dssp CCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCG-GGCEEEEEEEEETTEE-EE
T ss_pred CCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCc-ccCEEEEEEEEcCCCe-EE
Confidence 4567788999999999999999999999999987765432 2223343 799999997 9999999999999874 55
Q ss_pred ceEEEEeecC
Q psy14532 195 QNVHISVTVP 204 (258)
Q Consensus 195 ~~~~l~v~~~ 204 (258)
..+.|.|...
T Consensus 90 ~~~~l~V~~~ 99 (100)
T 2kdg_A 90 FTVQLDVLAK 99 (100)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEEec
Confidence 6677777643
No 468
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=4.8e-13 Score=85.77 Aligned_cols=87 Identities=26% Similarity=0.375 Sum_probs=68.6
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC-CcceEEec--CC--eEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL-NRRQKVFP--NG--TLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~-~~~~~~~~--~~--~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
.+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+.. ++ .|.|.++.. +|.|.|+|.+.|..+.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~- 91 (110)
T 2dm2_A 14 KLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTL-DDDGNYTIMAANPQGR- 91 (110)
T ss_dssp CCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCT-TTCSCCEEEEECTTCC-
T ss_pred cCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCCh-hhCEEEEEEEEECCCe-
Confidence 34567789999999999999999999999999988765 33444432 33 699999997 9999999999999884
Q ss_pred ccceEEEEeecCCc
Q psy14532 193 SSQNVHISVTVPPK 206 (258)
Q Consensus 193 ~~~~~~l~v~~~p~ 206 (258)
.+..+.|.|..+|.
T Consensus 92 ~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 92 ISCTGRLMVQAVNS 105 (110)
T ss_dssp EEECCCEEEECCSC
T ss_pred EEEEEEEEEECCCC
Confidence 45667777776554
No 469
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.45 E-value=2.2e-13 Score=100.70 Aligned_cols=125 Identities=21% Similarity=0.426 Sum_probs=79.8
Q ss_pred CCcceecCCcEEEEeeeCc--ccCceEEEEeCCc--cc-----------------CCCcceEEecC-----CeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAG--YPIESITWQKGVQ--QL-----------------PLNRRQKVFPN-----GTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~--~~~~~i~W~~~~~--~~-----------------~~~~~~~~~~~-----~~l~i~~~~ 173 (258)
....+.+|++++|.|.+.+ .+...+.|++... .. ....++.+..+ .+|.|.+++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (253)
T 3liz_H 8 GGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK 87 (253)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC
T ss_pred CCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 4567889999999999865 3456899998421 10 01123333221 249999999
Q ss_pred cCCCCcEEEEEEEeCCC---CCccceEEEEee----cCCccccCCCCCccCCCCeeeEEEEeccCCCCc-eeEEEECCEe
Q psy14532 174 KDHDRGVYWCTATNKQG---RSSSQNVHISVT----VPPKIAPFEFQPDLHSGDRAGVQCLVTKGDPPL-TISWLKNGLP 245 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~~---~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~g~~ 245 (258)
. +|+|.|.|.+.+... ........|.|. .+|.+........+..|+.++|.|.+.+++|.+ .+.|+++|..
T Consensus 88 ~-~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~ 166 (253)
T 3liz_H 88 S-EDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (253)
T ss_dssp G-GGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred h-hhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCee
Confidence 8 999999999987521 112334566665 234333233333456799999999996557766 8999999873
No 470
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.45 E-value=4.4e-13 Score=83.47 Aligned_cols=79 Identities=20% Similarity=0.413 Sum_probs=64.1
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVH 198 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 198 (258)
+....+.+|+.+.|.|.+.+.| +.+.|++++..+....+..+ .++.|.|.++.. +|+|.|+|.+.|..+. .+..+.
T Consensus 16 ~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~-~~~~L~i~~~~~-~D~G~Y~C~a~n~~g~-~~~~~~ 91 (95)
T 2ckn_A 16 VESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRI-TGEEVEVRDSIP-ADSGLYACVTSSPSGS-DTTYFS 91 (95)
T ss_dssp BCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEE-CSSEEEESSCCG-GGSEEEEEEEEETTEE-EEEEEE
T ss_pred cceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEE-eCCEEEECCCCh-HHCEEEEEEeccCCCc-EEEEEE
Confidence 4566788999999999998887 79999999988876666554 367899999997 9999999999998774 444555
Q ss_pred EEe
Q psy14532 199 ISV 201 (258)
Q Consensus 199 l~v 201 (258)
|.|
T Consensus 92 l~V 94 (95)
T 2ckn_A 92 VNV 94 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 471
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.45 E-value=1.2e-11 Score=104.99 Aligned_cols=169 Identities=13% Similarity=0.210 Sum_probs=112.8
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEE-Ee--eCCEeCcCCccccceecccceeeccccccceeeeeCCcEEE
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHIS-WK--LDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLI 78 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~-W~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 78 (258)
+|.+. .+.++.+.+|++++|.|.+.+.|.+.+. |+ +++..+... ....+. .....++|.|
T Consensus 165 ~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~---~~~~~~-------------~~~~~~~l~I 227 (731)
T 2v5y_A 165 TPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLK---EIKVTS-------------SRRFIASFNV 227 (731)
T ss_dssp SCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEE---EEEECC-------------SSEEEEEEEE
T ss_pred ccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCcccccc---ceEEec-------------cccceEEEEE
Confidence 46665 5668889999999999999999998887 88 566554322 000010 0011368999
Q ss_pred eecccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCCCcceecCCcEEEEeeeCcc----cCc--eEEEEeCCcc
Q psy14532 79 ENVQKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGY----PIE--SITWQKGVQQ 152 (258)
Q Consensus 79 ~~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~--~i~W~~~~~~ 152 (258)
.++ ...|+|.|+|.+.|..|...+..+.|.|..+|...............+.|.|..... +.. .+.|...+..
T Consensus 228 ~~~-~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~ 306 (731)
T 2v5y_A 228 VNT-TKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGS 306 (731)
T ss_dssp CSC-CTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS
T ss_pred ccc-ccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCC
Confidence 999 999999999999999987444777888887775544444444455788999976432 111 5666554322
Q ss_pred cCCCcceEEecCCeEEEEecccCCCCcEEEEEEE--eCCCCC
Q psy14532 153 LPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTAT--NKQGRS 192 (258)
Q Consensus 153 ~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~--~~~~~~ 192 (258)
. ..........+.|.++.. .+...|+|.+. |..|..
T Consensus 307 ~---~~~~~~~~~~~~i~~L~p-~t~Y~~~V~A~~~N~~G~s 344 (731)
T 2v5y_A 307 W---NDRQPVDSTSYKIGHLDP-DTEYEISVLLTRPGEGGTG 344 (731)
T ss_dssp C---EEEEECCSSEEEECSCCT-TCEEEEEEEEECSSTTCSC
T ss_pred c---eEEeccCcceEEEeCCCC-CCEEEEEEEEEecCCCccc
Confidence 1 112223346788888876 67677788888 877643
No 472
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.45 E-value=3.5e-13 Score=84.63 Aligned_cols=82 Identities=18% Similarity=0.360 Sum_probs=66.4
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCccc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSSQ 195 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~ 195 (258)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+..++ .|.|.++.. +|+|.|+|.+.|..+. .+.
T Consensus 13 ~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~-~~~ 90 (99)
T 3puc_A 13 LQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDT-SDSGLYTCTVKNSAGS-VSS 90 (99)
T ss_dssp CCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEEETTEE-EEE
T ss_pred CccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCc-ccCEEEEEEEEeCCCc-EeE
Confidence 45567889999999999999999999999999888766666554433 699999997 9999999999998874 455
Q ss_pred eEEEEee
Q psy14532 196 NVHISVT 202 (258)
Q Consensus 196 ~~~l~v~ 202 (258)
.+.|.|.
T Consensus 91 ~~~l~V~ 97 (99)
T 3puc_A 91 SCKLTIK 97 (99)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5666654
No 473
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.44 E-value=9.8e-13 Score=82.25 Aligned_cols=83 Identities=24% Similarity=0.507 Sum_probs=66.6
Q ss_pred cCCCcceecCCcEEEEeeeCcc-cCceEEEEeCCcccCCCcceEE-ecCC--eEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGY-PIESITWQKGVQQLPLNRRQKV-FPNG--TLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~-~~~~i~W~~~~~~~~~~~~~~~-~~~~--~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
.+....+.+|+.+.|.|.+.+. |.+.+.|++++..+....++.+ ..++ .|.|.++.. +|.|.|+|.+.|..+. .
T Consensus 7 ~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~-~ 84 (97)
T 2bk8_A 7 QIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITK-LDDGTYRCKVVNDYGE-D 84 (97)
T ss_dssp CCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEECSSCE-E
T ss_pred cCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCCh-hhCeEEEEEEECCCCe-E
Confidence 3456788899999999999996 8899999999988876665554 2344 799999997 9999999999999874 4
Q ss_pred cceEEEEee
Q psy14532 194 SQNVHISVT 202 (258)
Q Consensus 194 ~~~~~l~v~ 202 (258)
...+.|.|.
T Consensus 85 ~~~~~l~V~ 93 (97)
T 2bk8_A 85 SSYAELFVK 93 (97)
T ss_dssp EEEEEEEET
T ss_pred eEEEEEEEE
Confidence 455666664
No 474
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.44 E-value=9e-13 Score=85.30 Aligned_cols=102 Identities=15% Similarity=0.227 Sum_probs=67.6
Q ss_pred eeceeeeecCCCceEEEEEEeec--CCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeecccC
Q psy14532 7 YKFIQQTLQPGPPVSLKCIATGN--PTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQKD 84 (258)
Q Consensus 7 ~~~~~~~~~~g~~v~l~C~~~~~--~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 84 (258)
..+..+.+.+|++++|.|.+.+. +...+.|+|++..+......... .....+..|..+..+.+|.|.++ +.
T Consensus 8 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~------~~~~~~~~R~~~~~~~sL~I~~v-~~ 80 (117)
T 3q0h_A 8 ETTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGW------HISPSFKDRVAPGPGLGLTLQSL-TV 80 (117)
T ss_dssp EESCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEE------ECCGGGTTTEEECSTTCEEECSC-CG
T ss_pred EccCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCc------eeCccccCcEEeCCceEEEEeeC-Ch
Confidence 45567889999999999998762 33479999986543221110110 01122334444445789999999 99
Q ss_pred CCceEEEEEEEeC-CcceeeceEEEEEecCCee
Q psy14532 85 HDRGVYWCTATNK-QGRSSSQNVHISVTGAPFV 116 (258)
Q Consensus 85 ~d~G~Y~C~~~~~-~~~~~~~~~~l~v~~~~~~ 116 (258)
+|+|.|+|.+... .+... ..+.|.|..+|..
T Consensus 81 ~D~G~Y~C~v~~~~~g~~~-~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 81 NDTGEYFCIYHTYPDGTYT-GRIFLEVLESSVA 112 (117)
T ss_dssp GGCEEEEEEEEEETTCCEE-EEEEEEEECC---
T ss_pred hhCEEEEEEEEECCCCCeE-EEEEEEEEccCcc
Confidence 9999999998654 45444 7889999887643
No 475
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.44 E-value=7.8e-13 Score=83.60 Aligned_cols=80 Identities=18% Similarity=0.231 Sum_probs=63.2
Q ss_pred ecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEE----ec----CCeEEEEecccCCCCcEEEEEEEeCCCCCccce
Q psy14532 125 IAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKV----FP----NGTLLIENVQKDHDRGVYWCTATNKQGRSSSQN 196 (258)
Q Consensus 125 ~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~----~~----~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~ 196 (258)
..++.+.|.|.+.|.|.|.++|++++..+........ .. .+.|.|.++.. +|+|.|+|.|.|..| ..+..
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~A~N~~G-~~~~~ 91 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTH-MNNGDYTLIAKNEYG-KDEKQ 91 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCG-GGCEEEEEEEECSSC-EEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCc-ccCEEEEEEEEeCCC-cEeEE
Confidence 4577899999999999999999999988776543211 11 23499999997 999999999999998 45577
Q ss_pred EEEEeecCCc
Q psy14532 197 VHISVTVPPK 206 (258)
Q Consensus 197 ~~l~v~~~p~ 206 (258)
+.|.|..+|.
T Consensus 92 ~~l~V~~~P~ 101 (103)
T 1wwb_X 92 ISAHFMGWPG 101 (103)
T ss_dssp EEECCSCCCC
T ss_pred EEEEECCCCC
Confidence 7788776664
No 476
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.44 E-value=3.2e-13 Score=87.76 Aligned_cols=96 Identities=21% Similarity=0.242 Sum_probs=68.6
Q ss_pred EEEEecCCeeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEe-------cCCeEEEEecccCCCCc
Q psy14532 107 HISVTGAPFVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVF-------PNGTLLIENVQKDHDRG 179 (258)
Q Consensus 107 ~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~~~~g 179 (258)
.|.|..+|.+.......+ .+...|.|.+.|.|.+.+.|++++..+......... ..+.|.|.++.. +|+|
T Consensus 2 ~L~V~~pP~i~~~~~~~~--~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G 78 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEPEL--RLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTH-YNNG 78 (118)
T ss_dssp --CCCCCCCCCCCCCCCC--CCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCG-GGCE
T ss_pred EEEEecCCceeccCCCee--ccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCCh-hcCE
Confidence 455666665443322222 256788999999999999999999888766543332 345799999997 9999
Q ss_pred EEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 180 VYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 180 ~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
.|+|.|.|..|. ....+.|.|...|.
T Consensus 79 ~Y~C~a~N~~G~-~~~~~~l~v~~~P~ 104 (118)
T 1wwc_A 79 NYTLIAKNPLGT-ANQTINGHFLKEPF 104 (118)
T ss_dssp EEEEEEEETTEE-EEEEEEECCSCCCC
T ss_pred EEEEEEECCCCe-EeeEEEEEEccCCC
Confidence 999999999884 55667777766653
No 477
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.44 E-value=3.6e-13 Score=87.26 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=63.9
Q ss_pred cCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEE--e--------cCCeEEEEecccCCCCcEEEEEEEeCCCCCccc
Q psy14532 126 AGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKV--F--------PNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQ 195 (258)
Q Consensus 126 ~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~--~--------~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~ 195 (258)
.+..+.|.|.+.|.|.|.|+|+++|..+....+... . ..+.|.|.++.. .|+|.|+|.|.|..|. ...
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~YtC~A~N~~G~-~~~ 91 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTH-VNNGNYTLLAANPFGQ-ASA 91 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCG-GGCEEEEEEEEETTEE-EEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCC-CCCEEEEEEEEECCCe-EEE
Confidence 567899999999999999999999999876654322 1 135799999997 9999999999999984 556
Q ss_pred eEEEEeecCCc
Q psy14532 196 NVHISVTVPPK 206 (258)
Q Consensus 196 ~~~l~v~~~p~ 206 (258)
.+.|.|...|.
T Consensus 92 t~~l~v~~~P~ 102 (126)
T 1he7_A 92 SIMAAFMDNPF 102 (126)
T ss_dssp EEEECCCSCTT
T ss_pred EEEEEEEcCCC
Confidence 77777776664
No 478
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.44 E-value=6.3e-13 Score=82.25 Aligned_cols=80 Identities=20% Similarity=0.282 Sum_probs=63.5
Q ss_pred eccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 116 VRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 116 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
...+.+..+.+|+.+.|.|.+.+ +.+.+.|++++..+....++.+..++ .|.|.++.. +|+|.|+|.+.|.
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~-~D~G~Y~C~a~n~---- 82 (93)
T 1waa_A 9 EKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQL-GMTGEVSFQAANT---- 82 (93)
T ss_dssp EECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCG-GGCEEEEEEETTE----
T ss_pred eccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCCh-hhCEEEEEEECCC----
Confidence 34456778999999999999976 45789999999998877777665544 699999998 9999999999764
Q ss_pred ccceEEEEee
Q psy14532 193 SSQNVHISVT 202 (258)
Q Consensus 193 ~~~~~~l~v~ 202 (258)
.....|.|.
T Consensus 83 -~~sa~L~V~ 91 (93)
T 1waa_A 83 -KSAANLKVK 91 (93)
T ss_dssp -EEEEEEEEE
T ss_pred -cEEEEEEEE
Confidence 234556554
No 479
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.44 E-value=2.2e-14 Score=103.39 Aligned_cols=127 Identities=14% Similarity=0.210 Sum_probs=83.2
Q ss_pred CCCcceecCCcEEEEeeeCcccC---ceEEEEeCCcccCCCcce--------EEecCCeEEEEecccCCCCcEEEEEEEe
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPI---ESITWQKGVQQLPLNRRQ--------KVFPNGTLLIENVQKDHDRGVYWCTATN 187 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~---~~i~W~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~~~~g~y~C~~~~ 187 (258)
+....+.+|+.++|.|.+.+.++ +.|.| + +......... .......|.|.++.. +|+|.|+|.+.+
T Consensus 11 P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~-~D~g~Y~C~~~~ 87 (214)
T 1ow0_A 11 PALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPW-NHGKTFTCTAAY 87 (214)
T ss_dssp CCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHH-HHTCEEEEEECC
T ss_pred cChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHc-CCCCeEEEEEec
Confidence 44456789999999999988653 68999 4 3332211000 001123566777776 899999999998
Q ss_pred CCCCCccceEEE---EeecCCccccCCC-CCccCCCCeeeEEEEeccCCCC-ceeEEEECCEecccc
Q psy14532 188 KQGRSSSQNVHI---SVTVPPKIAPFEF-QPDLHSGDRAGVQCLVTKGDPP-LTISWLKNGLPILSA 249 (258)
Q Consensus 188 ~~~~~~~~~~~l---~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~l~~~ 249 (258)
..+... ....+ .+..+|.+.+.+. ...+..|+.++|.|.+.+.+|+ +.|.|++||+.+..+
T Consensus 88 ~~~~~~-~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 153 (214)
T 1ow0_A 88 PESKTP-LTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 153 (214)
T ss_dssp SSCSSC-EEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGG
T ss_pred CCCCCc-eeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCC
Confidence 765321 11222 2345665544332 2346789999999999655665 699999999998765
No 480
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.43 E-value=6.1e-13 Score=99.20 Aligned_cols=122 Identities=15% Similarity=0.237 Sum_probs=79.8
Q ss_pred CCCcceecCCcEEEEeeeCccc-----CceEEEEeCC--cccC------------CCcceEEec---CCeEEEEecccCC
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYP-----IESITWQKGV--QQLP------------LNRRQKVFP---NGTLLIENVQKDH 176 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~-----~~~i~W~~~~--~~~~------------~~~~~~~~~---~~~l~i~~~~~~~ 176 (258)
+..+.+.+|++++|.|.+.+.+ .+.+.|+++. .... ...++.+.. ..+|.|.+++. +
T Consensus 22 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~-~ 100 (268)
T 1x9q_A 22 PLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEA-E 100 (268)
T ss_dssp CSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG-G
T ss_pred CCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCCh-h
Confidence 4456788999999999998766 4789999853 2111 123333322 23799999997 9
Q ss_pred CCcEEEEEEEeCCCCCccceEEEEeecCCc-----c-----------------cc-CCCCCccCCCCeeeEEEEeccCCC
Q psy14532 177 DRGVYWCTATNKQGRSSSQNVHISVTVPPK-----I-----------------AP-FEFQPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 177 ~~g~y~C~~~~~~~~~~~~~~~l~v~~~p~-----~-----------------~~-~~~~~~~~~g~~~~l~C~~~~~~p 233 (258)
|+|.|.|.+.+..+........|.|...+. . .. .+....+.+|++++|.|.+. +.+
T Consensus 101 DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~-~~~ 179 (268)
T 1x9q_A 101 DLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTS-GFT 179 (268)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEE-SSC
T ss_pred HCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEec-Ccc
Confidence 999999999987432223345566654321 0 01 12345688999999999995 544
Q ss_pred --CceeEEEEC
Q psy14532 234 --PLTISWLKN 242 (258)
Q Consensus 234 --~~~~~W~~~ 242 (258)
.+.+.|+++
T Consensus 180 ~~~~~v~W~k~ 190 (268)
T 1x9q_A 180 FGHYWMNWVRQ 190 (268)
T ss_dssp GGGCEEEEEEE
T ss_pred ccccEEEEEEe
Confidence 378999984
No 481
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.43 E-value=3.3e-13 Score=88.46 Aligned_cols=102 Identities=17% Similarity=0.198 Sum_probs=67.1
Q ss_pred cceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeeccc
Q psy14532 4 QLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENVQK 83 (258)
Q Consensus 4 ~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 83 (258)
.+...+.++.+.+|++++|.|.+.+.+.+.+.|++.+..+.... ..... ....+.........++|.|.++ +
T Consensus 3 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~--~~~~~-----~~~r~~~~~~~~~~~~L~I~~v-~ 74 (124)
T 3rbg_A 3 SLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLN--EYPVL-----KNSKYQLLHHSANQLSITVPNV-T 74 (124)
T ss_dssp -CCCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEET--TEECS-----CSSCCEEEEEETTEEEEEESSC-C
T ss_pred cccCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEe--ccccc-----cCCcEEEEeCCCCEEEEEECCC-C
Confidence 45567788899999999999999988889999997543211100 00000 0000000001112468999999 9
Q ss_pred CCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 84 DHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 84 ~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
.+|+|.|+|.+.+. +... ..+.|.|..+|.
T Consensus 75 ~~DsG~Y~C~a~n~-g~~~-~~~~l~V~~~P~ 104 (124)
T 3rbg_A 75 LQDEGVYKCLHYSD-SVST-KEVKVIVLATMK 104 (124)
T ss_dssp GGGCEEEEEEEESS-SEEE-EEEEEEEECC--
T ss_pred hHHCEEEEEEEEcC-CCCc-EEEEEEEEeCCC
Confidence 99999999999998 5555 788888887763
No 482
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.43 E-value=1.2e-13 Score=87.88 Aligned_cols=83 Identities=24% Similarity=0.467 Sum_probs=67.7
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEec---CCeEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFP---NGTLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
.+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....+..+.. .+.|.|.++.. +|+|.|+|.+.|..+. .+
T Consensus 20 ~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~-~~ 97 (106)
T 1nct_A 20 KPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQA-SDEGNYSVVVENSEGK-QE 97 (106)
T ss_dssp CCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCS-SCCSEEEECCBCSSCB-CC
T ss_pred CCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCc-hhCEEEEEEEEeCCCe-EE
Confidence 3556778899999999999999999999999998887666655543 35799999997 9999999999999884 55
Q ss_pred ceEEEEee
Q psy14532 195 QNVHISVT 202 (258)
Q Consensus 195 ~~~~l~v~ 202 (258)
..+.|.|.
T Consensus 98 ~~~~l~V~ 105 (106)
T 1nct_A 98 AEFTLTIQ 105 (106)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 66666653
No 483
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.43 E-value=4.2e-13 Score=91.47 Aligned_cols=91 Identities=23% Similarity=0.357 Sum_probs=70.2
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEec--C--CeEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFP--N--GTLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~--~--~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+.. + ..|.|.++.. .|.|.|+|.+.|..+. ..
T Consensus 48 ~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~-~~ 125 (154)
T 1fhg_A 48 ILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCG-DDDAKYTCKAVNSLGE-AT 125 (154)
T ss_dssp CCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCG-GGCEEEEEEEEETTEE-EE
T ss_pred CCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCCh-hcCEEEEEEEEECCCe-EE
Confidence 455778999999999999999999999999998887666655532 2 3799999997 9999999999999884 55
Q ss_pred ceEEEEeecCCccccCC
Q psy14532 195 QNVHISVTVPPKIAPFE 211 (258)
Q Consensus 195 ~~~~l~v~~~p~~~~~~ 211 (258)
..+.|.|..+|.....+
T Consensus 126 ~~~~l~V~~~p~~~~~~ 142 (154)
T 1fhg_A 126 CTAELLVETMGKEGEGE 142 (154)
T ss_dssp EEEEEEEECC-------
T ss_pred EEEEEEEeCcCcCCCCC
Confidence 67788888877655443
No 484
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.43 E-value=6.5e-13 Score=82.02 Aligned_cols=78 Identities=24% Similarity=0.483 Sum_probs=63.9
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEE
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVH 198 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 198 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ..+.|.|.++.. +|+|.|+|.+.|..+...+..+.
T Consensus 10 p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~------~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~s~~~~ 82 (91)
T 3bfo_A 10 PTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE------TKKLYMVPYVDL-EHQGTYWCHVYNDRDSQDSKKVE 82 (91)
T ss_dssp CCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC------CSSEEEESSCCG-GGCEEEEEEEECSSCEEECCCEE
T ss_pred CCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC------CCCeEEECCCCH-HhCEEEEEEEEcCCCCEEeeeEE
Confidence 34566889999999999999999999999998876543 246799999997 99999999999998865566777
Q ss_pred EEeec
Q psy14532 199 ISVTV 203 (258)
Q Consensus 199 l~v~~ 203 (258)
|.|..
T Consensus 83 l~V~~ 87 (91)
T 3bfo_A 83 IIIDE 87 (91)
T ss_dssp EEEC-
T ss_pred EEEeh
Confidence 77753
No 485
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.43 E-value=4.4e-13 Score=101.17 Aligned_cols=121 Identities=16% Similarity=0.347 Sum_probs=81.8
Q ss_pred CCcceecCCcEEEEeeeCccc--CceEEEEeCC--cccC-----------------CCcceEEec-----CCeEEEEecc
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYP--IESITWQKGV--QQLP-----------------LNRRQKVFP-----NGTLLIENVQ 173 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~-----~~~l~i~~~~ 173 (258)
....+.+|++++|.|.+.+.+ .+.+.|+++. .... ...++.+.. ..+|.|.+++
T Consensus 30 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 109 (291)
T 2gki_A 30 GPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLT 109 (291)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCC
T ss_pred CcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCC
Confidence 456788999999999987765 5789999853 2111 112333321 2469999999
Q ss_pred cCCCCcEEEEEEEeCC-CC---CccceEEEEeec----------------CCccccCCCCCccCCCCeeeEEEEeccCCC
Q psy14532 174 KDHDRGVYWCTATNKQ-GR---SSSQNVHISVTV----------------PPKIAPFEFQPDLHSGDRAGVQCLVTKGDP 233 (258)
Q Consensus 174 ~~~~~g~y~C~~~~~~-~~---~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p 233 (258)
. +|+|.|.|.+.+.. +. .......|.|.. ++.+...+....+.+|++++|.|.+ .+.|
T Consensus 110 ~-~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~~~ 187 (291)
T 2gki_A 110 S-EDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKS-SQSL 187 (291)
T ss_dssp G-GGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEE-SSCC
T ss_pred H-HHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEc-CCcc
Confidence 7 99999999999864 11 112334666665 1222223434568899999999999 4665
Q ss_pred Cc------eeEEEEC
Q psy14532 234 PL------TISWLKN 242 (258)
Q Consensus 234 ~~------~~~W~~~ 242 (258)
.+ .+.|+++
T Consensus 188 ~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 188 FNSRTRKNYLAWYQQ 202 (291)
T ss_dssp EETTTTEECEEEEEE
T ss_pred ccccccceeEEEEEE
Confidence 54 8999985
No 486
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.43 E-value=8.8e-13 Score=95.02 Aligned_cols=124 Identities=25% Similarity=0.357 Sum_probs=89.7
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc--ceEEe---cCCeEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR--RQKVF---PNGTLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~--~~~~~---~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
.+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... +..+. ..+.|.|.++.. +|.|.|+|.+.|..+.
T Consensus 24 ~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~- 101 (215)
T 3mtr_A 24 GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSE-NDFGNYNCTAVNRIGQ- 101 (215)
T ss_dssp CCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSG-GGCEEEEEEEECSSCE-
T ss_pred CCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCCh-hhCeEEEEEEEECCCc-
Confidence 3444678899999999999999999999999998876552 33332 245799999997 9999999999999884
Q ss_pred ccceEEEEeecCCccccCCCCCccCCCCeeeEEEEec---cCCCCc--eeEEEECCEe
Q psy14532 193 SSQNVHISVTVPPKIAPFEFQPDLHSGDRAGVQCLVT---KGDPPL--TISWLKNGLP 245 (258)
Q Consensus 193 ~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~---~~~p~~--~~~W~~~g~~ 245 (258)
.+..+.|.+..+|..+..... ...+..+.|.|... .+.|.. .+.|.+++..
T Consensus 102 ~~~~~~l~v~~~P~~p~~~~~--~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~ 157 (215)
T 3mtr_A 102 ESLEFILVQADTPSSPSIDQV--EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEE 157 (215)
T ss_dssp EEEEEEEEECCCCCCCEEEEE--EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCC
T ss_pred eEEEEEEEECCCCCCCcceEE--EEecceEEEEEecCCccCCCceEEEEEEEEECCCC
Confidence 456677888776654432211 23467789999752 223433 4788887653
No 487
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.42 E-value=5.4e-14 Score=92.00 Aligned_cols=100 Identities=22% Similarity=0.340 Sum_probs=72.7
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCe-EEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEee
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPH-ISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIEN 80 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 80 (258)
||.|.. +....+.+|+++.|.|.+.+.|.+. +.|++++..+.... ..++.+..... ......+|.|.+
T Consensus 14 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~-~~~~~~~~~~~---------~~~~~~~L~I~~ 82 (122)
T 2cry_A 14 PPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGT-SGRYTVETIST---------EEGVISTLTISN 82 (122)
T ss_dssp SCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEE-ETTEEEEEEEE---------TTEEEEEEECTT
T ss_pred CCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCC-CCCEEEEEecC---------CCceEEEEEEcC
Confidence 688877 7888999999999999999999886 99999987765421 11221110000 000123799999
Q ss_pred cccCCCc-eEEEEEEEeCCcceeeceEEEEEecCC
Q psy14532 81 VQKDHDR-GVYWCTATNKQGRSSSQNVHISVTGAP 114 (258)
Q Consensus 81 ~~~~~d~-G~Y~C~~~~~~~~~~~~~~~l~v~~~~ 114 (258)
+ ...|. |.|+|.+.|..|... ..+.|.|..++
T Consensus 83 v-~~~D~~G~Y~C~a~N~~G~~~-~~~~l~V~~~~ 115 (122)
T 2cry_A 83 I-VRADFQTIYNCTAWNSFGSDT-EIIRLKEQGSE 115 (122)
T ss_dssp C-CHHHHHSCEEEEEECSSCEEE-EEECCCCSCSS
T ss_pred C-ChhhCCceEEEEEECCCCeEE-EEEEEEECCCC
Confidence 9 98998 999999999998877 77777776543
No 488
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=5.9e-13 Score=83.58 Aligned_cols=82 Identities=20% Similarity=0.376 Sum_probs=65.5
Q ss_pred CCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCCeEEEEecccCCCCcEEEEEEEeCCCCCccceEEE
Q psy14532 120 GNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNGTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVHI 199 (258)
Q Consensus 120 ~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l 199 (258)
....+.+|+.+.|.|.+.+.| +.+.|++++..+....+..+. ...|.|.++.. +|.|.|+|.+.|..+. ....+.|
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~-~~~L~i~~v~~-~D~G~Y~C~a~n~~g~-~~~~~~l 86 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT-GEEVEVQDSVP-ADSGLYACVTSSPSGS-DTTYFSV 86 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC-SSEEEETTCCT-TTCEEEEEEEEETTEE-EEEEEEE
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE-CCEEEEccCCH-HHCEEEEEEEEeCCce-EEEEEEE
Confidence 345678999999999998876 799999999888766655554 67899999997 9999999999998874 4556666
Q ss_pred EeecCC
Q psy14532 200 SVTVPP 205 (258)
Q Consensus 200 ~v~~~p 205 (258)
.|...|
T Consensus 87 ~V~~~~ 92 (99)
T 2cr3_A 87 NVSDAL 92 (99)
T ss_dssp CBCSCC
T ss_pred EEecCC
Confidence 666543
No 489
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=2.4e-13 Score=87.14 Aligned_cols=87 Identities=28% Similarity=0.519 Sum_probs=69.6
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEE--ecC--CeEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKV--FPN--GTLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~--~~~--~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+........ ..+ .+|.|.++.. +|+|.|+|.+.|..+. .+
T Consensus 16 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~-~~ 93 (110)
T 2dm3_A 16 PGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTS-RDAGIYTCIATNRAGQ-NS 93 (110)
T ss_dssp CCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCG-GGCSBBCEEEECSSCE-EE
T ss_pred CCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCc-ccCEEEEEEEECCCCE-EE
Confidence 4567788999999999999999999999999988765543332 222 3799999997 9999999999999884 56
Q ss_pred ceEEEEeecCCcc
Q psy14532 195 QNVHISVTVPPKI 207 (258)
Q Consensus 195 ~~~~l~v~~~p~~ 207 (258)
..+.|.|..+|..
T Consensus 94 ~~~~l~V~~~p~~ 106 (110)
T 2dm3_A 94 FSLELVVAAKESG 106 (110)
T ss_dssp ECCEEEEECCCCS
T ss_pred EEEEEEEeCCCCC
Confidence 7778888876653
No 490
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=2.7e-13 Score=90.23 Aligned_cols=82 Identities=29% Similarity=0.533 Sum_probs=62.6
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCC----------------------------ccc-CCCcceEEecC---Ce
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGV----------------------------QQL-PLNRRQKVFPN---GT 166 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~----------------------------~~~-~~~~~~~~~~~---~~ 166 (258)
+....+..|+.+.|.|.+.|.|.|.++|++++ ..+ ....+..+... ..
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 45567889999999999999999999999988 333 12233333332 35
Q ss_pred EEEEecccCCCCcEEEEEEEeCCCCCccceEEEEee
Q psy14532 167 LLIENVQKDHDRGVYWCTATNKQGRSSSQNVHISVT 202 (258)
Q Consensus 167 l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~l~v~ 202 (258)
|.|.++.. +|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 105 L~I~~v~~-~DsG~Y~C~A~N~~G~-~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEK-EDEGVYTVTVKNPVGE-DQVNLTVKVI 138 (139)
T ss_dssp EECSCCCT-TTCEEEEEEEECSSCE-EEEEEEEEEC
T ss_pred EEECCCCc-ccCEEEEEEEEeCCce-EEEEEEEEEE
Confidence 99999997 9999999999999883 4566666653
No 491
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.6e-12 Score=82.26 Aligned_cols=82 Identities=22% Similarity=0.358 Sum_probs=65.3
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCc--ceEEecC---CeEEEEecccCCCCcEEEEEEEeCCCCC
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNR--RQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRS 192 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~--~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~ 192 (258)
.+....+.+|+.+.|.|.+.+ +.+.+.|++++..+.... ++.+..+ ..|.|.++.. +|+|.|+|.+.|
T Consensus 13 ~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~n----- 85 (103)
T 1x44_A 13 QLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATK-ADAAEYSVMTTG----- 85 (103)
T ss_dssp CCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECT-TTCSEEEEEETT-----
T ss_pred cCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCc-ccCEEEEEEECC-----
Confidence 456678889999999999987 778999999998887665 4455443 4799999997 999999999976
Q ss_pred ccceEEEEeecCCc
Q psy14532 193 SSQNVHISVTVPPK 206 (258)
Q Consensus 193 ~~~~~~l~v~~~p~ 206 (258)
.+....|.|..+|.
T Consensus 86 ~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 86 GQSSAKLSVDLKSG 99 (103)
T ss_dssp EEEEEEEEEECCCS
T ss_pred CcEEEEEEEeCCCC
Confidence 35667777877664
No 492
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.41 E-value=8.2e-13 Score=82.91 Aligned_cols=82 Identities=23% Similarity=0.396 Sum_probs=64.0
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcc-eEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRR-QKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~-~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... .....++ +|.|.++.. +|+|.|+|.+.|..+. ..
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~N~~g~-~~ 89 (99)
T 1u2h_A 12 LMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAER-GDAGFYTCKAVNEYGA-RQ 89 (99)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCG-GGCEEEEEEEEETTEE-EE
T ss_pred CCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCc-CCCEEEEEEEEECCCc-ee
Confidence 4456788999999999999999999999999988765433 3333333 699999997 9999999999999874 44
Q ss_pred ceEEEEee
Q psy14532 195 QNVHISVT 202 (258)
Q Consensus 195 ~~~~l~v~ 202 (258)
..+.|.|.
T Consensus 90 ~~~~l~V~ 97 (99)
T 1u2h_A 90 CEARLEVR 97 (99)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 55666664
No 493
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.4e-12 Score=84.50 Aligned_cols=87 Identities=18% Similarity=0.193 Sum_probs=64.6
Q ss_pred eeccCCCcceecCCcEEEEeeeCcc---cCceEEEEeCCccc-C--CCcceEEe---------cCCeEEEEecccCCCCc
Q psy14532 115 FVRPMGNVSAIAGEPLYLGCPVAGY---PIESITWQKGVQQL-P--LNRRQKVF---------PNGTLLIENVQKDHDRG 179 (258)
Q Consensus 115 ~~~~~~~~~~~~g~~~~l~C~~~~~---~~~~i~W~~~~~~~-~--~~~~~~~~---------~~~~l~i~~~~~~~~~g 179 (258)
++..+..+.+.+|+.++|.|.+.+. |.|.|.|+|+.... . ...+..+. ....|.|.++.. .|+|
T Consensus 10 F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~DaG 88 (126)
T 2dav_A 10 FIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKD-NFAG 88 (126)
T ss_dssp CCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCT-TSCE
T ss_pred EEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCc-ccCE
Confidence 3445677889999999999998764 78999999974210 0 11222221 135799999997 9999
Q ss_pred EEEEEEEeCCCCCccceEEEEeec
Q psy14532 180 VYWCTATNKQGRSSSQNVHISVTV 203 (258)
Q Consensus 180 ~y~C~~~~~~~~~~~~~~~l~v~~ 203 (258)
.|+|+|.|..+ ..+..+.|.|..
T Consensus 89 ~Y~Cevsn~~g-~~~~~~~L~V~~ 111 (126)
T 2dav_A 89 NYRCEVTYKDK-FDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEECSSC-EEEECCEEEEEC
T ss_pred EEEEEEEeCCC-cEEEEEEEEEEe
Confidence 99999999976 466778888888
No 494
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.2e-12 Score=84.98 Aligned_cols=97 Identities=21% Similarity=0.375 Sum_probs=67.5
Q ss_pred CCcceeeceeeeecCCCceEEEEEEeecCCCeEEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 2 HPQLIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 2 ~p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
||.+.... ... ..+...|.|.+.|.|.+.+.|+|+|..+.... +....... ......++|.|.++
T Consensus 8 pP~i~~~~-~~~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~---~~~~~~~~---------~~~~~~~~L~i~~~ 72 (118)
T 1wwc_A 8 PPRVVSLE-EPE--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESK---IIHVEYYQ---------EGEISEGCLLFNKP 72 (118)
T ss_dssp CCCCCCCC-CCC--CCCEEEEEEEEECSSCCEEEEEETTEECCCSS---SEEEEEEE---------CSSEEEEEEEEESC
T ss_pred CCceeccC-CCe--eccceEEEEEeeeeCCCeEEEEECCEECCCCC---ceeEEEec---------cCccccEEEEECCC
Confidence 56654432 222 33667899999999999999999998886542 11111000 00013457999999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCe
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPF 115 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~ 115 (258)
+..|+|.|+|.+.|..|... ..+.|.|...|.
T Consensus 73 -~~~d~G~Y~C~a~N~~G~~~-~~~~l~v~~~P~ 104 (118)
T 1wwc_A 73 -THYNNGNYTLIAKNPLGTAN-QTINGHFLKEPF 104 (118)
T ss_dssp -CGGGCEEEEEEEEETTEEEE-EEEEECCSCCCC
T ss_pred -ChhcCEEEEEEEECCCCeEe-eEEEEEEccCCC
Confidence 99999999999999998877 777887776653
No 495
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=9.6e-13 Score=83.26 Aligned_cols=82 Identities=21% Similarity=0.393 Sum_probs=67.0
Q ss_pred cCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCCcEEEEEEEeCCCCCcc
Q psy14532 118 PMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDRGVYWCTATNKQGRSSS 194 (258)
Q Consensus 118 ~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~g~y~C~~~~~~~~~~~ 194 (258)
.+....+.+|+.+.|.|.+.+ +.+.+.|++++..+....++.+..++ .|.|.++.. +|+|.|+|.+.| .+
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n-----~~ 86 (103)
T 2edf_A 14 PLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASL-KDAGEYTCEVEA-----SK 86 (103)
T ss_dssp CCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCT-TTCSEEEEECSS-----CE
T ss_pred cCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCc-ccCEEEEEEEcc-----CC
Confidence 455677889999999999987 77899999999988776666665444 599999997 999999999998 24
Q ss_pred ceEEEEeecCCc
Q psy14532 195 QNVHISVTVPPK 206 (258)
Q Consensus 195 ~~~~l~v~~~p~ 206 (258)
..+.|.|..+|.
T Consensus 87 ~~~~l~V~~~p~ 98 (103)
T 2edf_A 87 STASLHVEEKAS 98 (103)
T ss_dssp EEEEEEECCCSS
T ss_pred cEEEEEEeCCCC
Confidence 667788877664
No 496
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=84.09 Aligned_cols=95 Identities=24% Similarity=0.479 Sum_probs=73.4
Q ss_pred ceEEEEEecCC--eeccCCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecCC---eEEEEecccCCCC
Q psy14532 104 QNVHISVTGAP--FVRPMGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPNG---TLLIENVQKDHDR 178 (258)
Q Consensus 104 ~~~~l~v~~~~--~~~~~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~ 178 (258)
..+.|.|...| +...+....+.+|+.+.|.|.+.+. +.+.|++++..+....++.+..++ .|.|.++.. +|+
T Consensus 9 ~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~ 85 (113)
T 2edh_A 9 TSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVA-EDA 85 (113)
T ss_dssp CCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCS-TTC
T ss_pred EEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCCh-hhC
Confidence 45566666443 3334566788999999999999764 689999999988877777776666 799999997 999
Q ss_pred cEEEEEEEeCCCCCccceEEEEeecCCc
Q psy14532 179 GVYWCTATNKQGRSSSQNVHISVTVPPK 206 (258)
Q Consensus 179 g~y~C~~~~~~~~~~~~~~~l~v~~~p~ 206 (258)
|.|+|.+ + ..+..+.|.|..+|.
T Consensus 86 G~Y~C~a----~-~~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 86 GEYLCMC----G-KERTSAMLTVRAMPS 108 (113)
T ss_dssp EEEEEEE----T-TEEEEEEEEECCCCC
T ss_pred EEEEEEe----C-CCCEEEEEEEeCCCC
Confidence 9999999 2 455667888887664
No 497
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.40 E-value=9.6e-12 Score=86.29 Aligned_cols=160 Identities=16% Similarity=0.208 Sum_probs=101.1
Q ss_pred CcceeeceeeeecCCCceEEEEEEeecCCCe-EEEeeCCEeCcCCccccceecccceeeccccccceeeeeCCcEEEeec
Q psy14532 3 PQLIYKFIQQTLQPGPPVSLKCIATGNPTPH-ISWKLDGYPLAGDRHENKNRIGEARVQQLPLNRRQKVFPNGTLLIENV 81 (258)
Q Consensus 3 p~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 81 (258)
..+...|.+..|..|+++.|+|.... +.+. +.|... +. +.... ....-..|.|.++
T Consensus 3 f~v~v~P~~~~V~~G~S~~l~Cs~~c-~~p~~~glet~---l~------~~~~~-------------~g~~w~~l~l~~v 59 (192)
T 1zxq_A 3 FEVHVRPKKLAVEPKGSLEVNCSTTC-NQPEVGGLETS---LN------KILLD-------------EQAQWKHYLVSNI 59 (192)
T ss_dssp CCEEEESSEEEECTTEEEEEEEEESC-SSCSEEEEECS---SE------EEEEE-------------EETTEEEEEEEEE
T ss_pred cEEEEeCCCcEEeCCCcEEEEEECCC-CCccccccccc---cC------ceEEc-------------CCCCeEEEEEecc
Confidence 34667888899999999999999864 4443 455431 10 00000 0000124889999
Q ss_pred ccCCCceEEEEEEEeCCcceeeceEEEEEecCCeeccCC--CcceecCCcEEEEeeeCc-ccCc--eEEEEeCCcccCCC
Q psy14532 82 QKDHDRGVYWCTATNKQGRSSSQNVHISVTGAPFVRPMG--NVSAIAGEPLYLGCPVAG-YPIE--SITWQKGVQQLPLN 156 (258)
Q Consensus 82 ~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~--~~~~~~g~~~~l~C~~~~-~~~~--~i~W~~~~~~~~~~ 156 (258)
+ |.|.|.|.+.-...... ..+.|+|+.+|...... +..+.+|+.++|.|.+.+ .|.. .+.|++++..+...
T Consensus 60 -s--~~g~~~C~~~c~~~~~~-~~~~itVy~~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~ 135 (192)
T 1zxq_A 60 -S--HDTVLQCHFTCSGKQES-MNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYE 135 (192)
T ss_dssp -C--SCEEEEEEEEETTEEEE-EEEEEEECBCCCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEE
T ss_pred -c--cCCeeEEEEECCCcceE-EEEEEEEEeCCCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeec
Confidence 6 78999999987655544 88999999887443322 346789999999999975 6655 58999988776421
Q ss_pred cce---EEecCCeEE-EEecccCCCCcEEEEEEEeCC
Q psy14532 157 RRQ---KVFPNGTLL-IENVQKDHDRGVYWCTATNKQ 189 (258)
Q Consensus 157 ~~~---~~~~~~~l~-i~~~~~~~~~g~y~C~~~~~~ 189 (258)
.-. ......++. ...+.++++...|+|+|.-..
T Consensus 136 ~f~~~~~~~~~~tv~~~~~~~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 136 TFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDL 172 (192)
T ss_dssp ECCSSTTCTTCEEEEEEEECCGGGGGCEEEEEEEEEC
T ss_pred ccccccCcCcceEEEEEEecchhhCCceEEEEEEecC
Confidence 100 000111222 223445344449999999766
No 498
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.40 E-value=9.6e-13 Score=82.73 Aligned_cols=82 Identities=29% Similarity=0.484 Sum_probs=64.7
Q ss_pred CCCcceecCCcEEEEeeeCcccCceEEEEeCCcccCC--CcceEEecC---CeEEEEecccCCCCcEEEEEEEeCCCCCc
Q psy14532 119 MGNVSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPL--NRRQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRSS 193 (258)
Q Consensus 119 ~~~~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~--~~~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~~ 193 (258)
+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+..+ ..|.|.++.. +|+|.|+|.+.|..+. .
T Consensus 12 ~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~g~-~ 89 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQK-QDGGLYTLSLGNEFGS-D 89 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCG-GGCEEEEEEEEETTEE-E
T ss_pred CCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCc-ccCEEEEEEEEeCCCc-E
Confidence 4456788999999999999999999999999887753 334444443 5799999997 9999999999998874 5
Q ss_pred cceEEEEee
Q psy14532 194 SQNVHISVT 202 (258)
Q Consensus 194 ~~~~~l~v~ 202 (258)
+..+.|.|.
T Consensus 90 ~~~~~l~V~ 98 (100)
T 3irg_A 90 SATVNIHIR 98 (100)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 566666654
No 499
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.40 E-value=2e-11 Score=87.20 Aligned_cols=173 Identities=18% Similarity=0.288 Sum_probs=98.3
Q ss_pred ceeeceeeeecCCCceEEEEEEeecCCCeEEEeeC--CEeCcCCccccceecccceeeccccccceeee---eCCcEEEe
Q psy14532 5 LIYKFIQQTLQPGPPVSLKCIATGNPTPHISWKLD--GYPLAGDRHENKNRIGEARVQQLPLNRRQKVF---PNGTLLIE 79 (258)
Q Consensus 5 ~~~~~~~~~~~~g~~v~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~ 79 (258)
+.+.|..+.+.+|++|+|+|.....-...+.||+. |+.. +..+.......-.++.|.... .+.+|+|.
T Consensus 4 lTQsP~sls~s~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P-------~lLiy~~s~~~sGvp~RFSgS~Sgt~ftLtIs 76 (259)
T 4f9l_D 4 LTQSPSSLSASLGDTITITCHASQNINLWLSWYQQRPGNIP-------KLLIYRASNLHTGVPSRFSGSGSATGFTLTIS 76 (259)
T ss_dssp EEEECSBCCBCTTCEEEEEEEESSCCTTCEEEEEECTTSCE-------EEEEETTTEECTTCCTTEEEEEETTEEEEEEE
T ss_pred EEccCCeEEECCCCCEEEEEEcCCCCCCCEEEEEECCCCCC-------EEEEECCCccCCCCCCCEEeeccCCeEEEEEc
Confidence 45667888999999999999876543446899963 3211 111111111111122222222 23469999
Q ss_pred ecccCCCceEEEEEEEeCCcceeeceEEEEEec----C------C-------------eeccCCCcceecCCcEEEEeee
Q psy14532 80 NVQKDHDRGVYWCTATNKQGRSSSQNVHISVTG----A------P-------------FVRPMGNVSAIAGEPLYLGCPV 136 (258)
Q Consensus 80 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----~------~-------------~~~~~~~~~~~~g~~~~l~C~~ 136 (258)
++ +.+|++.|.|............-.+|.+.. + + .+.......+.+|+++.|.|.+
T Consensus 77 ~l-q~eD~A~YyC~~~~~~~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~a 155 (259)
T 4f9l_D 77 SL-QPEDIATYYCQQGHSYPYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKA 155 (259)
T ss_dssp SC-CGGGCEEEEEEECSSSSCCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEE
T ss_pred cc-ChhhCEEEEEeecCCCCCCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEee
Confidence 99 999999999986543211110111222211 0 0 0111122357789999999999
Q ss_pred Cccc--CceEEEEeC--Cccc------C-----------CCcceEEecCC-----eEEEEecccCCCCcEEEEEEE
Q psy14532 137 AGYP--IESITWQKG--VQQL------P-----------LNRRQKVFPNG-----TLLIENVQKDHDRGVYWCTAT 186 (258)
Q Consensus 137 ~~~~--~~~i~W~~~--~~~~------~-----------~~~~~~~~~~~-----~l~i~~~~~~~~~g~y~C~~~ 186 (258)
.|.. .-.+.|+|. |+.+ . ...++.+..+. .|.|.+++. +|.+.|.|.-.
T Consensus 156 SG~tfs~y~~~WvRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~-eDTAvYYCAr~ 230 (259)
T 4f9l_D 156 SGYTFTRYYLYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTS-EDSAVYYCSRE 230 (259)
T ss_dssp ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCG-GGCEEEEEEEE
T ss_pred eCCCcccCcEEEEEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCCh-HHCEEEEEEEe
Confidence 8754 336778773 2221 1 12234443321 378889987 99999999654
No 500
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=1.5e-12 Score=82.53 Aligned_cols=78 Identities=18% Similarity=0.299 Sum_probs=63.5
Q ss_pred cceecCCcEEEEeeeCcccCceEEEEeCCcccCCCcceEEecC---CeEEEEecccCCCCcEEEEEEEeCCCCCccceEE
Q psy14532 122 VSAIAGEPLYLGCPVAGYPIESITWQKGVQQLPLNRRQKVFPN---GTLLIENVQKDHDRGVYWCTATNKQGRSSSQNVH 198 (258)
Q Consensus 122 ~~~~~g~~~~l~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~~~~g~y~C~~~~~~~~~~~~~~~ 198 (258)
..+.+|+.+.|.|.+.+.+.+ +.|++++..+....++.+... ..|.|.++.. +|+|.|+|.+.|.. ..+.
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~n~~-----~~~~ 92 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKV-QDSGEFECRTEGVS-----AFFG 92 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCT-TTCEEEEEECSSCC-----CCEE
T ss_pred EEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCCh-hhCEEEEEEECCce-----EEEE
Confidence 578899999999999998888 999999988876666555433 3699999997 99999999998862 3577
Q ss_pred EEeecCCc
Q psy14532 199 ISVTVPPK 206 (258)
Q Consensus 199 l~v~~~p~ 206 (258)
|.|..+|.
T Consensus 93 l~V~~~P~ 100 (104)
T 2e6p_A 93 VTVQDPSG 100 (104)
T ss_dssp EEEECCCC
T ss_pred EEEcCCCC
Confidence 78877765
Done!