BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14533
(209 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1VA9|A Chain A, Solution Structure Of The Second Fniii Domain Of Dscaml1
Protein
Length = 122
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 49 TEAEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFT 108
TE P P + ++S SI+VTW P L NG + GY +GYRE G Y+
Sbjct: 10 TEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV 69
Query: 109 TIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAA 161
+ D + V TL L+K+ +Y +VVQAFN G GP SSE++ TLE P++
Sbjct: 70 EMKATGD-SEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPSS 121
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 154 TLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKV-YYEN 201
T E P PP+D+T ++S S+ VTW+ P LQNG I GY++ Y EN
Sbjct: 10 TEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYREN 58
>pdb|2EDX|A Chain A, Solution Structures Of The Fn3 Domain Of Human Receptor-
Type Tyrosine-Protein Phosphatase F
Length = 134
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 37 GAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYRE 96
G+ S + T P+A P + V++ S ++RV+W PPPA NG + Y + Y E
Sbjct: 1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAY-E 59
Query: 97 QGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLE 156
G + +R + L GL K+ +Y + V+A + GPGP SS V V+T E
Sbjct: 60 AVDGEDRGRHVVDGISREHSS--WDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDE 117
Query: 157 DVPAAPPLDI 166
DVP+ PP +
Sbjct: 118 DVPSGPPRKV 127
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 147 SSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYENM 202
S + +T + P+APP + C ++ ST++ V+W PPP +NG I Y V YE +
Sbjct: 6 SGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAV 61
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 10 GTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEP 58
G E+W T YRV V A +G G S P+LV T+ + P+ P
Sbjct: 85 GLEKW---------TEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPP 124
>pdb|2ED9|A Chain A, Solution Structure Of The Third Fibronectin Type Iii
Domain Of Human Netrin Receptor Dcc
Length = 124
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 139 NEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVY 198
N GPG + +++V TL DVP+APP +++ ++S S+ V+W PPP QNG I GYK+
Sbjct: 8 NRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIR 67
Query: 199 YE 200
+
Sbjct: 68 HR 69
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 34 NSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLG 93
N G G +D + V T ++ P+A P + ++S SI+V+W PPP+ NG + GY +
Sbjct: 8 NRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIR 67
Query: 94 YREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQ 153
+R+ + T PN TGL K +Y V A G GP S+ + +
Sbjct: 68 HRKT---TRRGEMETLEPNNL----WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAE 120
Query: 154 TLED 157
T E+
Sbjct: 121 TPEN 124
>pdb|3F7P|C Chain C, Crystal Structure Of A Complex Between Integrin Beta4 And
Plectin
pdb|3F7P|D Chain D, Crystal Structure Of A Complex Between Integrin Beta4 And
Plectin
pdb|3F7P|E Chain E, Crystal Structure Of A Complex Between Integrin Beta4 And
Plectin
Length = 248
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNF-TTIPNRSDG 116
P +A A S I W PP +G +GY + Y QG ++ + +P+
Sbjct: 8 PQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSKVPS---- 58
Query: 117 AGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSL 176
LT L Y Y++ V A+ +G GP SS VS +T ++VP+ P + + +SST
Sbjct: 59 ---VELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGR-LAFNVVSSTVT 114
Query: 177 SVTWQPPPLLLQNGEILGYKVYY 199
++W P NGEI Y+V Y
Sbjct: 115 QLSWAEP--AETNGEITAYEVCY 135
>pdb|3F7R|A Chain A, First Pair Of Fibronectin Type Iii Domains And Part Of The
Connecting Segment Of The Integrin Beta4
Length = 249
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNF-TTIPNRSDG 116
P +A A S I W PP +G +GY + Y QG ++ + +P+
Sbjct: 9 PQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSKVPS---- 59
Query: 117 AGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSL 176
LT L Y Y++ V A+ +G GP SS VS +T ++VP+ P + + +SST
Sbjct: 60 ---VELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGR-LAFNVVSSTVT 115
Query: 177 SVTWQPPPLLLQNGEILGYKVYY 199
++W P NGEI Y+V Y
Sbjct: 116 QLSWAEP--AETNGEITAYEVCY 136
>pdb|1QG3|A Chain A, Crystal Structure Of A Tandem Pair Of Fibronectin Type Iii
Domains From The Cytoplasmic Tail Of Integrin Alpha6
Beta4
pdb|1QG3|B Chain B, Crystal Structure Of A Tandem Pair Of Fibronectin Type Iii
Domains From The Cytoplasmic Tail Of Integrin Alpha6
Beta4
Length = 195
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNF-TTIPNRSDG 116
P +A A S I W PP +G +GY + Y QG ++ + +P+
Sbjct: 5 PQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSKVPS---- 55
Query: 117 AGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSL 176
LT L Y Y++ V A+ +G GP SS VS +T ++VP+ P + + +SST
Sbjct: 56 ---VELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPG-RLAFNVVSSTVT 111
Query: 177 SVTWQPPPLLLQNGEILGYKVYY 199
++W P NGEI Y+V Y
Sbjct: 112 QLSWAEP--AETNGEITAYEVCY 132
>pdb|3F7Q|A Chain A, First Pair Of Fibronectin Type Iii Domains And Part Of The
Connecting Segment Of The Integrin Beta4
pdb|3F7Q|B Chain B, First Pair Of Fibronectin Type Iii Domains And Part Of The
Connecting Segment Of The Integrin Beta4
Length = 234
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNF-TTIPNRSDG 116
P +A A S I W PP +G +GY + Y QG ++ + +P+
Sbjct: 9 PQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLDSKVPS---- 59
Query: 117 AGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSL 176
LT L Y Y++ V A+ +G GP SS VS +T ++VP+ P + + +SST
Sbjct: 60 ---VELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGR-LAFNVVSSTVT 115
Query: 177 SVTWQPPPLLLQNGEILGYKVYY 199
++W P NGEI Y+V Y
Sbjct: 116 QLSWAEP--AETNGEITAYEVCY 136
>pdb|1X5H|A Chain A, The Solution Structure Of The Third Fibronectin Type Iii
Domain Of Human Neogenin
Length = 132
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 142 GPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
G S +V+V+TL DVP+A P +++ +S S+ + WQPP QNG+I GYK+ Y
Sbjct: 1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRY 58
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 37 GAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYRE 96
G+ S + V T ++ P+A P L +S SI + W PP NG + GY + YR+
Sbjct: 1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRK 60
Query: 97 QGFGRQNSYNFTTIPNRSDGAGVATLT-GLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTL 155
R++ T + G ++ L GL + +Y+ V A G GP + +S +T
Sbjct: 61 A--SRKSDVTETLV----SGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETF 114
Query: 156 E 156
E
Sbjct: 115 E 115
>pdb|1X5G|A Chain A, The Solution Structure Of The Second Fibronectin Type Iii
Domain Of Human Neogenin
Length = 116
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 61 LHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVA 120
L A A S SI VTW P + NG++ Y L Y E+G ++ + ++
Sbjct: 24 LRAYAASPTSITVTWETPVSG--NGEIQNYKLYYMEKGTDKEQDVDVSSHS--------Y 73
Query: 121 TLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLED 157
T+ GL+KY +Y V A+N+ GPG + +V+V+TL D
Sbjct: 74 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 161 APPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
P ++ A S TS++VTW+ P + NGEI YK+YY
Sbjct: 19 GPAPNLRAYAASPTSITVTWETP--VSGNGEIQNYKLYY 55
>pdb|3P4L|A Chain A, Crystal Structure Of A Hemojuvelin-Binding Fragment Of
Neogenin
Length = 211
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 51 AEPPTAEPSGLHAVAISSDSIRVTWSPP--PAHLTNGDLLGYYLGYREQGFGRQNSYNFT 108
A+ P P G+ A +S D+IR+TW+ P H D Y + ++ T
Sbjct: 1 ADLPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWK------------T 48
Query: 109 TIP--NRSDGAGVATL----TGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAP 162
IP + A TL TGL+ Y+ V + S T E VP +P
Sbjct: 49 NIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSP 108
Query: 163 PLDITCSALSST--SLSVTWQPPPLLLQNGEILGYKVYY 199
P D+T + ++ V WQPP NG+I GY +YY
Sbjct: 109 PKDVTVVSKEGKPKTIIVNWQPPSE--ANGKITGYIIYY 145
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 8/156 (5%)
Query: 1 DVEWKSQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSG 60
+ ++K+ N+ T + V L P TLY V+ + S T PT+ P
Sbjct: 53 NTKYKNANATTLSYLV-TGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKD 111
Query: 61 LHAVAISSD--SIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAG 118
+ V+ +I V W PP NG + GY + Y + + +
Sbjct: 112 VTVVSKEGKPKTIIVNWQPPSE--ANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQ 169
Query: 119 VATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQT 154
+ LT Y +QA N KG GPMS V +T
Sbjct: 170 IQELTLDTPYY---FKIQARNSKGMGPMSEAVQFRT 202
>pdb|2EDY|A Chain A, Solution Structures Of The Fn3 Domain Of Human Receptor-
Type Tyrosine-Protein Phosphatase F
Length = 103
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGA 117
P LH +++ + + W PP NG ++ Y + +R+ +Q N TT
Sbjct: 12 PQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDIN-SQQELQNITTDTR----- 65
Query: 118 GVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTL 155
TLTGL+ YDI V+A+ KG GP+S + +T+
Sbjct: 66 --FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTM 101
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 163 PLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYENM 202
P ++ + L++++ + W PP L +NG I+ Y V + ++
Sbjct: 12 PQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDI 51
>pdb|2ED8|A Chain A, Solution Structure Of The Second Fibronectin Type Iii
Domain Of Human Netrin Receptor Dcc
Length = 106
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 61 LHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVA 120
L AV+ S SI +TW PP NG + GY L E G++ + + +
Sbjct: 14 LQAVSTSPTSILITWEPPA--YANGPVQGYRLFCTEVSTGKEQNIEVDGLSYK------- 64
Query: 121 TLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLED 157
L GL+K+ +Y + A+N GPG + +++V TL D
Sbjct: 65 -LEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100
>pdb|2DLH|A Chain A, Solution Structure Of The Second Fn3 Domain Of Human
Receptor-Type Tyrosine-Protein Phosphatase Delta
Length = 121
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 37 GAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYRE 96
G+ S P+L T + P++ P + A +SS +I V W P NG + GY + Y
Sbjct: 1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEP--EEPNGQIQGYRVYYTM 58
Query: 97 QGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQT 154
N++ + + + + T+ L + Y + V AF G GP+SS++ V T
Sbjct: 59 DPTQHVNNWMKHNVAD----SQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT 112
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 147 SSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
S V QT E P++ P D+ LSST++ V W+ P NG+I GY+VYY
Sbjct: 6 SGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPE--EPNGQIQGYRVYY 56
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 4 WKSQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTE 50
W N Q + +L+P Y V+VLA S+G G S + V T+
Sbjct: 67 WMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQ 113
>pdb|3LPW|A Chain A, Crystal Structure Of The Fniii-Tandem A77-A78 From The
A-Band Of Titin
pdb|3LPW|B Chain B, Crystal Structure Of The Fniii-Tandem A77-A78 From The
A-Band Of Titin
Length = 197
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 10/135 (7%)
Query: 8 NSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAIS 67
N W V Q L Y RVLAEN G G P++ +E P P + + ++
Sbjct: 58 NCHKTSWKVDQ-LQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLP-PGKITLMDVT 115
Query: 68 SDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRK 127
+S+ ++W P H +LGY + + +G + + + AT+TGL +
Sbjct: 116 RNSVSLSWEKP-EHDGGSRILGYIVEMQTKGSDKWATCATVKVTE-------ATITGLIQ 167
Query: 128 YRKYDIVVQAFNEKG 142
+Y V A NEKG
Sbjct: 168 GEEYSFRVSAQNEKG 182
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 21/146 (14%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGA 117
P L ++ S+ +TW PP L G + Y+ + + + S T S
Sbjct: 9 PQDLKVKEVTKTSVTLTWDPP--LLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTS--- 63
Query: 118 GVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAA----PPLDITCSALSS 173
+ L++ Y V A NE G G + +T E V A+ PP IT ++
Sbjct: 64 --WKVDQLQEGCSYYFRVLAENEYGIG-----LPAETAESVKASERPLPPGKITLMDVTR 116
Query: 174 TSLSVTWQPPPLLLQNG--EILGYKV 197
S+S++W+ P +G ILGY V
Sbjct: 117 NSVSLSWEKPE---HDGGSRILGYIV 139
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 157 DVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYENMRE 204
D P PP D+ ++ TS+++TW PP LL G + K Y RE
Sbjct: 4 DTPG-PPQDLKVKEVTKTSVTLTWDPP--LLDGGSKI--KNYIVEKRE 46
>pdb|2DTG|E Chain E, Insulin Receptor (Ir) Ectodomain In Complex With Fab's
Length = 897
Score = 42.7 bits (99), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 64 VAISSDSIRVTWSP--PPAHLTNGDLLGYYLGYREQGFGR-----------QNSYNFTTI 110
+ S D I + W P PP DLLG+ L Y+E + NS+ I
Sbjct: 478 IRTSFDKILLRWEPYWPPDFR---DLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDI 534
Query: 111 --PNRSDGAGVAT-----LTGLRKYRKYDIVVQAF-----NEKGPGPMSSEVSVQTLEDV 158
P RS+ + GL+ + +Y I V+ + G S + VQT
Sbjct: 535 DPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATN 594
Query: 159 PAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYENMRE 204
P+ P LD + SS+ + + W+PP NG I Y V++E E
Sbjct: 595 PSVP-LDPISVSNSSSQIILKWKPPS--DPNGNITHYLVFWERQAE 637
>pdb|2GEE|A Chain A, Crystal Structure Of Human Type Iii Fibronectin
Extradomain B And Domain 8
Length = 203
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 57 EPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDG 116
+P+ L V I+ SI + W+P L + ++GY + G G +F
Sbjct: 25 QPTDLSFVDITDSSIGLRWTP----LNSSTIIGYRITVVAAGEGIPIFEDFV-----DSS 75
Query: 117 AGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSL 176
G T+TGL YDI V G S+ ++ VP PP D+ + + ++
Sbjct: 76 VGYYTVTGLEPGIDYDISVYTVKNGG---ESTPTTLTQQTAVP--PPTDLRFTNIGPDTM 130
Query: 177 SVTWQPPP 184
VTW PPP
Sbjct: 131 RVTWAPPP 138
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 20 LLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPP 79
L P Y + V + G P+ L A PP P+ L I D++RVTW+PPP
Sbjct: 84 LEPGIDYDISVYTVKNGGESTPT--TLTQQTAVPP---PTDLRFTNIGPDTMRVTWAPPP 138
Query: 80 A-HLTN 84
+ LTN
Sbjct: 139 SIDLTN 144
>pdb|1X5F|A Chain A, The Solution Structure Of The First Fibronectin Type Iii
Domain Of Human Neogenin
Length = 120
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 12 EQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAE 52
E +Q+L+PAT+Y RV+A+N G+G S PL V T+ E
Sbjct: 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114
>pdb|3LOH|E Chain E, Structure Of The Insulin Receptor Ectodomain, Including Ct
P
Length = 917
Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 64 VAISSDSIRVTWSP--PPAHLTNGDLLGYYLGYREQGFGR-----------QNSYNFTTI 110
+ S D I + W P PP DLLG+ L Y+E + NS+ I
Sbjct: 478 IRTSFDKILLRWEPYWPPDFR---DLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDI 534
Query: 111 --PNRSDGAGVAT-----LTGLRKYRKYDIVVQAF-----NEKGPGPMSSEVSVQTLEDV 158
P RS+ + GL+ + +Y I V+ + G S + VQT
Sbjct: 535 DPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATN 594
Query: 159 PAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYENMRE 204
P+ P LD + SS+ + + W+PP NG I Y V++E E
Sbjct: 595 PSVP-LDPISVSNSSSQIILKWKPPS--DPNGNITHYLVFWERQAE 637
>pdb|2V5Y|A Chain A, Crystal Structure Of The Receptor Protein Tyrosine
Phosphatase Mu Ectodomain
Length = 731
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 69/183 (37%), Gaps = 6/183 (3%)
Query: 20 LLPATLYRVRVLAEN--SLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSP 77
L P T Y + VL G G P L T+ P P L V + S I + W P
Sbjct: 323 LDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEP 382
Query: 78 PPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQA 137
++T + Y Q G Q + + T+T L Y + +
Sbjct: 383 FGYNVTRCHSYNLTVHYCYQ-VGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLIL 441
Query: 138 FNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKV 197
N +G S E+ VQT ED+P A P + + + + W+ P G I Y++
Sbjct: 442 MNPEG-RKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTY--GVITLYEI 498
Query: 198 YYE 200
Y+
Sbjct: 499 TYK 501
>pdb|1FNF|A Chain A, Fragment Of Human Fibronectin Encompassing Type-Iii
Repeats 7 Through 10
Length = 368
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 17 LQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWS 76
L +L P T Y V ++A N GR PLL+ ++ + P L VA + S+ ++W
Sbjct: 243 LTNLTPGTEYVVSIVALN----GREESPLLIGQQSTV-SDVPRDLEVVAATPTSLLISWD 297
Query: 77 PPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQ 136
P + Y + Y E G G FT ++S AT++GL+ Y I V
Sbjct: 298 APAVTVRY-----YRITYGETG-GNSPVQEFTVPGSKS----TATISGLKPGVDYTITVY 347
Query: 137 AFNEKGPGPMSSE 149
A +G P SS+
Sbjct: 348 AVTGRGDSPASSK 360
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 9 SGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISS 68
S ++ VL +LLP T Y V V +S+ S PL + P+G+ I++
Sbjct: 145 SPSDNAVVLTNLLPGTEYVVSV---SSVYEQHESTPL--RGRQKTGLDSPTGIDFSDITA 199
Query: 69 DSIRVTWSPPPAHLTNGDLLGYYLGYREQGF-GRQNSYNFTTIPNRSDGAGVATLTGLRK 127
+S V W P A +T GY + + + F GR +P+ + TLT L
Sbjct: 200 NSFTVHWIAPRATIT-----GYRIRHHPEHFSGRPREDR---VPHSRNSI---TLTNLTP 248
Query: 128 YRKYDIVVQAFNEKGPGPMSSEVSVQ-TLEDVPAAPPLDITCSALSSTSLSVTWQPPPLL 186
+Y + + A N + P+ + Q T+ DVP D+ A + TSL ++W P +
Sbjct: 249 GTEYVVSIVALNGREESPL--LIGQQSTVSDVPR----DLEVVAATPTSLLISWDAPAVT 302
Query: 187 LQ 188
++
Sbjct: 303 VR 304
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 73/187 (39%), Gaps = 26/187 (13%)
Query: 15 AVLQDLLPATLYRVRVLAENSLGAGRP-SDPLLVHTEAEPPTAEPSGLHAVAISSDSIRV 73
+L P Y V V P SD ++ A PP P+ L I D++RV
Sbjct: 60 CTFDNLSPGLEYNVSVYTVKDDKESVPISDTII---PAVPP---PTDLRFTNIGPDTMRV 113
Query: 74 TWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDI 133
TW+PPP+ DL + + Y ++ + P SD A V LT L +Y +
Sbjct: 114 TWAPPPSI----DLTNFLVRYSPVK-NEEDVAELSISP--SDNAVV--LTNLLPGTEYVV 164
Query: 134 VVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEIL 193
V + E+ ++ + P I S +++ S +V W P I
Sbjct: 165 SVSSVYEQ-----HESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAP-----RATIT 214
Query: 194 GYKVYYE 200
GY++ +
Sbjct: 215 GYRIRHH 221
>pdb|4GH7|B Chain B, Crystal Structure Of Anticalin N7a In Complex With
Oncofetal Fibronectin Fragment Fn7b8
pdb|4GH7|D Chain D, Crystal Structure Of Anticalin N7a In Complex With
Oncofetal Fibronectin Fragment Fn7b8
Length = 285
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 59 SGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAG 118
+ L V I+ SI + W+P L + ++GY + G G +F G
Sbjct: 100 TDLSFVDITDSSIGLRWTP----LNSSTIIGYRITVVAAGEGIPIFEDFV-----DSSVG 150
Query: 119 VATLTGLRKYRKYDI-VVQAFN--EKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTS 175
T+TGL YDI V+ N E P ++ + +V PP D+ + + +
Sbjct: 151 YYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAV--------PPPTDLRFTNIGPDT 202
Query: 176 LSVTWQPPP 184
+ VTW PPP
Sbjct: 203 MRVTWAPPP 211
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 20 LLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPP 79
L P Y + V+ + G P+ L A PP P+ L I D++RVTW+PPP
Sbjct: 157 LEPGIDYDISVITLINGGESAPT--TLTQQTAVPP---PTDLRFTNIGPDTMRVTWAPPP 211
Query: 80 A-HLTN 84
+ LTN
Sbjct: 212 SIDLTN 217
>pdb|2CSP|A Chain A, Solution Structure Of The Fniii Domain Of Human
Rim-Binding Protein 2
Length = 130
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 147 SSEVSVQTLEDVPAAPPLDITCSA-LSSTSLSVTWQPP---PLLLQNG-EILGYKVYYEN 201
SS V TL P APP D+T A ++ ++ V+W+PP P L NG + GY VY +
Sbjct: 5 SSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKG 64
Query: 202 MR 203
R
Sbjct: 65 QR 66
>pdb|1UEN|A Chain A, Solution Structure Of The Third Fibronectin Iii Domain Of
Human Kiaa0343 Protein
Length = 125
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 156 EDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
ED+P P ++ + ++ST V W P PL G + GY++YY
Sbjct: 11 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYY 54
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 54 PTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGY-REQGFGRQNSYNFTTIPN 112
P P + ++S V W P P G L GY + Y + Q ++N +
Sbjct: 14 PMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKIL 73
Query: 113 RSDGAGV-ATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLE 156
G+ L GL + Y + V+ N KG GP S + T E
Sbjct: 74 TFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPE 118
>pdb|3FL7|A Chain A, Crystal Structure Of The Human Ephrin A2 Ectodomain
Length = 536
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 17 LQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT----EAEPPTAEPSGLHAVAISSDSIR 72
+ DL P Y V A N + S + + EPP G S+ S+
Sbjct: 404 VSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGR-----STTSLS 458
Query: 73 VTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYD 132
V+WS PP + + Y + YR++G NSYN R++G V TL L Y
Sbjct: 459 VSWSIPPPQQSR--VWKYEVTYRKKG--DSNSYNV----RRTEGFSV-TLDDLAPDTTYL 509
Query: 133 IVVQAFNEKGPGPMSSEVSVQTL 155
+ VQA ++G G S QTL
Sbjct: 510 VQVQALTQEGQGAGSKVHEFQTL 532
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 41 PSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFG 100
P DP + PP+A P L AV + + + + W+PP D++ Y EQ +
Sbjct: 322 PQDPASMPC-TRPPSA-PHYLTAVGMGA-KVELRWTPPQDSGGREDIV--YSVTCEQCWP 376
Query: 101 R-------QNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQ 153
+ S ++ P+ V T++ L + Y V+A N G + + S +
Sbjct: 377 ESGECGPCEASVRYSEPPHGLTRTSV-TVSDLEPHMNYTFTVEARN--GVSGLVTSRSFR 433
Query: 154 TLE-DVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
T + P + S+TSLSV+W PP Q + Y+V Y
Sbjct: 434 TASVSINQTEPPKVRLEGRSTTSLSVSWSIPP--PQQSRVWKYEVTY 478
>pdb|2X11|A Chain A, Crystal Structure Of The Complete Epha2 Ectodomain In
Complex With Ephrin A5 Receptor Binding Domain
Length = 545
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 17 LQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT----EAEPPTAEPSGLHAVAISSDSIR 72
+ DL P Y V A N + S + + EPP G S+ S+
Sbjct: 401 VSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGR-----STTSLS 455
Query: 73 VTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYD 132
V+WS PP + + Y + YR++G NSYN R++G V TL L Y
Sbjct: 456 VSWSIPPPQQSR--VWKYEVTYRKKG--DSNSYNV----RRTEGFSV-TLDDLAPDTTYL 506
Query: 133 IVVQAFNEKGPGPMSSEVSVQTL 155
+ VQA ++G G S QTL
Sbjct: 507 VQVQALTQEGQGAGSKVHEFQTL 529
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 18/169 (10%)
Query: 41 PSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFG 100
P DP + PP+A P L AV + + + + W+PP D++ Y EQ +
Sbjct: 319 PQDPASMPC-TRPPSA-PHYLTAVGMGA-KVELRWTPPQDSGGREDIV--YSVTCEQCWP 373
Query: 101 R-------QNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQ 153
+ S ++ P+ V T++ L + Y V+A N G + + S +
Sbjct: 374 ESGECGPCEASVRYSEPPHGLTRTSV-TVSDLEPHMNYTFTVEARN--GVSGLVTSRSFR 430
Query: 154 TLE-DVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYEN 201
T + P + S+TSLSV+W PP Q + Y+V Y
Sbjct: 431 TASVSINQTEPPKVRLEGRSTTSLSVSWSIPP--PQQSRVWKYEVTYRK 477
>pdb|2X10|A Chain A, Crystal Structure Of The Complete Epha2 Ectodomain
Length = 545
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 16 VLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT----EAEPPTAEPSGLHAVAISSDSI 71
+ DL P Y V A N + S + + EPP G S+ S+
Sbjct: 400 TVSDLEPHXNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGR-----STTSL 454
Query: 72 RVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKY 131
V+WS PP + + Y + YR++G NSYN R++G V TL L Y
Sbjct: 455 SVSWSIPPPQQSR--VWKYEVTYRKKG--DSNSYNV----RRTEGFSV-TLDDLAPDTTY 505
Query: 132 DIVVQAFNEKGPGPMSSEVSVQTL 155
+ VQA ++G G S QTL
Sbjct: 506 LVQVQALTQEGQGAGSKVHEFQTL 529
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 121 TLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLE-DVPAAPPLDITCSALSSTSLSVT 179
T++ L + Y V+A N G + + S +T + P + S+TSLSV+
Sbjct: 400 TVSDLEPHXNYTFTVEARN--GVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVS 457
Query: 180 WQPPPLLLQNGEILGYKVYY 199
W PP Q + Y+V Y
Sbjct: 458 WSIPP--PQQSRVWKYEVTY 475
>pdb|3R8Q|A Chain A, Structure Of Fibronectin Domain 12-14
Length = 290
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 15/123 (12%)
Query: 17 LQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWS 76
+ L P T Y++ + N P V +A PS L +A + +S+ V+W
Sbjct: 169 ITGLQPGTDYKIYLYTLNDNARSSP-----VVIDASTAIDAPSNLRFLATTPNSLLVSWQ 223
Query: 77 PPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQ 136
PP A +T GY + Y + G S +P G AT+TGL +Y I V
Sbjct: 224 PPRARIT-----GYIIKYEKPG-----SPPREVVPRPRPGVTEATITGLEPGTEYTIYVI 273
Query: 137 AFN 139
A
Sbjct: 274 ALK 276
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 53 PPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPN 112
P P+ L ++ S+ W+PP LT GYR + ++ + I
Sbjct: 19 PAIPAPTDLKFTQVTPTSLSAQWTPPNVQLT---------GYRVRVTPKEKTGPMKEINL 69
Query: 113 RSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALS 172
D + V ++GL KY++ V A + + V V TLE+V +PP + +
Sbjct: 70 APDSSSVV-VSGLMVATKYEVSVYALKDTLTSRPAQGV-VTTLENV--SPPRRARVTDAT 125
Query: 173 STSLSVTWQPPPLLLQNGEILGYKV 197
T+++++W+ + I G++V
Sbjct: 126 ETTITISWR-----TKTETITGFQV 145
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 121 TLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTW 180
T+TGL+ Y I + N+ SS V + + A P ++ A + SL V+W
Sbjct: 168 TITGLQPGTDYKIYLYTLNDNA---RSSPVVIDASTAIDA--PSNLRFLATTPNSLLVSW 222
Query: 181 QPPPLLLQNGEILGYKVYYEN 201
QPP I GY + YE
Sbjct: 223 QPP-----RARITGYIIKYEK 238
>pdb|2ED7|A Chain A, Solution Structure Of The First Fibronectin Type Iii
Domain Of Human Netrin Receptor Dcc
Length = 119
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGA 117
P + V +SS +R++W PP G++ + + + +G R+ + N TT P G+
Sbjct: 21 PRDVVPVLVSSRFVRLSWRPP--AEAKGNIQTFTVFFSREGDNRERALN-TTQP----GS 73
Query: 118 GVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQT 154
T+ L+ Y V A+NE GPG S + V T
Sbjct: 74 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVAT 110
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 19 DLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAE 52
+L P +Y RV+A N G G S P+ V T+ E
Sbjct: 80 NLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113
>pdb|1FNH|A Chain A, Crystal Structure Of Heparin And Integrin Binding Segment
Of Human Fibronectin
Length = 271
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 17 LQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWS 76
+ L P T Y++ + N P V +A PS L +A + +S+ V+W
Sbjct: 150 ITGLQPGTDYKIYLYTLNDNARSSP-----VVIDASTAIDAPSNLRFLATTPNSLLVSWQ 204
Query: 77 PPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQ 136
PP A +T GY + Y + G S +P G AT+TGL +Y I V
Sbjct: 205 PPRARIT-----GYIIKYEKPG-----SPPREVVPRPRPGVTEATITGLEPGTEYTIYVI 254
Query: 137 AF--NEKG 142
A N+K
Sbjct: 255 ALKNNQKS 262
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 18/140 (12%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGA 117
P+ L ++ S+ W+PP LT GYR + ++ + I D +
Sbjct: 5 PTDLKFTQVTPTSLSAQWTPPNVQLT---------GYRVRVTPKEKTGPMKEINLAPDSS 55
Query: 118 GVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLS 177
V ++GL KY++ V A + + V V TLE+V +PP + + T+++
Sbjct: 56 SVV-VSGLMVATKYEVSVYALKDTLTSRPAQGV-VTTLENV--SPPRRARVTDATETTIT 111
Query: 178 VTWQPPPLLLQNGEILGYKV 197
++W+ + I G++V
Sbjct: 112 ISWR-----TKTETITGFQV 126
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 121 TLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTW 180
T+TGL+ Y I + N+ SS V + + A P ++ A + SL V+W
Sbjct: 149 TITGLQPGTDYKIYLYTLNDNA---RSSPVVIDASTAIDA--PSNLRFLATTPNSLLVSW 203
Query: 181 QPPPLLLQNGEILGYKVYYEN 201
QPP I GY + YE
Sbjct: 204 QPP-----RARITGYIIKYEK 219
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 7/40 (17%)
Query: 158 VPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKV 197
+PA P D+ + ++ TSLS W PP N ++ GY+V
Sbjct: 2 IPA--PTDLKFTQVTPTSLSAQWTPP-----NVQLTGYRV 34
>pdb|1X5K|A Chain A, The Solution Structure Of The Sixth Fibronectin Type Iii
Domain Of Human Neogenin
Length = 124
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 154 TLEDVPAAPPLDITCSALSST--SLSVTWQPPPLLLQNGEILGYKVYY 199
T E VP +PP D+T + ++ V WQPP NG+I GY +YY
Sbjct: 13 TFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEA--NGKITGYIIYY 58
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Query: 54 PTAEPSGLHAVAISSD--SIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIP 111
PT+ P + V+ +I V W PP NG + GY + Y + + +
Sbjct: 18 PTSPPKDVTVVSKEGKPKTIIVNWQPPSE--ANGKITGYIIYYSTDVNAEIHDWVIEPVV 75
Query: 112 NRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQT 154
+ LT Y +QA N KG GPMS V +T
Sbjct: 76 GNRLTHQIQELTLDTPYY---FKIQARNSKGMGPMSEAVQFRT 115
>pdb|2DJS|A Chain A, Solution Structures Of The Fn3 Domain Of Human Ephrin
Type- B Receptor 1
Length = 108
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 61 LHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVA 120
+H V+ + SI ++W P NG +L Y + Y E+ N +N + ++++ A
Sbjct: 14 MHQVSATMRSITLSW--PQPEQPNGIILDYEIRYYEK---EHNEFNSSMARSQTN---TA 65
Query: 121 TLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLED 157
+ GLR Y + V+A G G S ++ QTL D
Sbjct: 66 RIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 102
>pdb|3D1M|C Chain C, Crystal Structure Of Sonic Hedgehog Bound To The Third
Fniii Domain Of Cdo
pdb|3D1M|D Chain D, Crystal Structure Of Sonic Hedgehog Bound To The Third
Fniii Domain Of Cdo
pdb|3N1F|C Chain C, Crystal Structure Of Ihhn Bound To Cdofn3
pdb|3N1F|D Chain D, Crystal Structure Of Ihhn Bound To Cdofn3
pdb|3N1Q|C Chain C, Crystal Structure Of Dhhn Bound To Cdofn3
pdb|3N1Q|D Chain D, Crystal Structure Of Dhhn Bound To Cdofn3
pdb|3N1Q|F Chain F, Crystal Structure Of Dhhn Bound To Cdofn3
Length = 102
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 54 PTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNR 113
P P + A+S I + W+ P+ N + G+Y+ YR + Y +
Sbjct: 4 PITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVV--- 60
Query: 114 SDGAGVATLTG-LRKYRKYDIVVQAFNEKGPGPMSSEVSVQT 154
+G+ + G L+ YDI +Q FNE G S+ + +T
Sbjct: 61 -EGSKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101
>pdb|1WFO|A Chain A, The Eighth Fn3 Domain Of Human Sidekick-2
Length = 130
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 153 QTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYE 200
+TL+DVP PP+ I + +TS+ + WQPP NG IL Y++ +
Sbjct: 22 RTLDDVPG-PPMGILFPEVRTTSVRLIWQPP--AAPNGIILAYQITHR 66
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 41 PSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFG 100
PS P ++ + P G+ + + S+R+ W PP A NG +L Y + +R
Sbjct: 14 PSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAA--PNGIILAYQITHRLNTTT 71
Query: 101 RQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQT 154
+ P+ A T TGL+ Y + A KG G + + V T
Sbjct: 72 ANTATVEVLAPS----ARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 121
>pdb|2DBJ|A Chain A, Solution Structures Of The Fn3 Domain Of Human Proto-
Oncogene Tyrosine-Protein Kinase Mer Precursor
Length = 124
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 154 TLEDVPAAPPLDITCS-ALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
T E P+ PL++T SS ++ + W PP Q+GE++GY++ +
Sbjct: 13 TTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISH 59
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 67 SSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFG 100
SSD++ + W PP +G+L+GY + + Q G
Sbjct: 32 SSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAG 65
>pdb|2E7H|A Chain A, Solution Structure Of The Second Fn3 Domain From Human
Ephrin Type-B Receptor 4
Length = 109
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 67 SSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNF-TTIPNRSDGAGVATLTGL 125
S S+ + W+ P A +G +L Y + Y E+G +S F T NR A L GL
Sbjct: 20 SPSSLSLAWAVPRA--PSGAVLDYEVKYHEKGAEGPSSVRFLKTSENR------AELRGL 71
Query: 126 RKYRKYDIVVQAFNEKGPGPMSSEVSVQTLED 157
++ Y + V+A +E G GP E QT D
Sbjct: 72 KRGASYLVQVRARSEAGYGPFGQEHHSQTQLD 103
>pdb|3N1G|C Chain C, Crystal Structure Of Dhhn Bound To Bocfn3
pdb|3N1G|D Chain D, Crystal Structure Of Dhhn Bound To Bocfn3
pdb|3N1M|C Chain C, Crystal Structure Of Ihhn Bound To Bocfn3
pdb|3N1P|C Chain C, Crystal Structure Of Ihhn Bound To Bocfn3
Length = 111
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 51 AEPPTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTI 110
E P A P A++ +I + W PA N + G+Y+ YR + Y +
Sbjct: 3 TERPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMV 62
Query: 111 PNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQT 154
+++ L+ YDI +Q FNE G S+ + +T
Sbjct: 63 EG---DKYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICET 103
>pdb|1WFN|A Chain A, The Fourth Fn3 Domain Of Human Sidekick-2
Length = 119
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 37 GAGRPSDPLLVHTEAEPPTAEPSG-LHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYR 95
G+ S P LV T + P P G L I S++V+W P NG L GY + +
Sbjct: 1 GSSGSSGPQLVRTHEDVP--GPVGHLSFSEILDTSLKVSWQEPGEK--NGILTGYRISWE 56
Query: 96 EQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSS 148
E + R N+ +PN + V TGL Y I V A KG G +S+
Sbjct: 57 E--YNRTNTRVTHYLPNVTLEYRV---TGLTALTTYTIEVAAMTSKGQGQVSA 104
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 152 VQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYE 200
V+T EDVP P ++ S + TSL V+WQ P +NG + GY++ +E
Sbjct: 11 VRTHEDVPG-PVGHLSFSEILDTSLKVSWQEPG--EKNGILTGYRISWE 56
>pdb|1CFB|A Chain A, Crystal Structure Of Tandem Type Iii Fibronectin Domains
From Drosophila Neuroglian At 2.0 Angstroms
Length = 205
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 20 LLPATLYRVRVLAENSLGAGRPS-DPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPP 78
+ P Y RV+A N +GA PS T+ + P P + +++ ++W+P
Sbjct: 69 MSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPM 128
Query: 79 PAHLTNGDLLGYYLGYREQ----GFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIV 134
P N YY+ ++ + N +++ R + +A KY I
Sbjct: 129 PEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDW-----RQNNIVIADQPTFVKYL---IK 180
Query: 135 VQAFNEKGPGPMSSE 149
V A N++G +++E
Sbjct: 181 VVAINDRGESNVAAE 195
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 107 FTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEV-SVQTLEDVPAAPPLD 165
+ +PN +D + V ++ + Y V AFN+ G P S+ S T DVP P +
Sbjct: 55 YEKVPN-TDSSFVVQMS---PWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDN 110
Query: 166 ITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYYENMRELPMG 208
+ +L ++W P P + N Y V ++ R++P
Sbjct: 111 VVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWK--RDIPAA 151
>pdb|1MFN|A Chain A, Solution Nmr Structure Of Linked Cell Attachment Modules
Of Mouse Fibronectin Containing The Rgd And Synergy
Regions, 20 Structures
pdb|2MFN|A Chain A, Solution Nmr Structure Of Linked Cell Attachment Modules
Of Mouse Fibronectin Containing The Rgd And Synergy
Regions, 10 Structures
Length = 184
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 21/134 (15%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYR-EQGFGRQNSYNFTTIPNRSDG 116
P+G + I+++S V W P A +T GY + + E GR P+R+
Sbjct: 5 PTGFDSSDITANSFTVHWVAPRAPIT-----GYIIRHHAEHSVGRPRQDRVP--PSRNS- 56
Query: 117 AGVATLTGLRKYRKYDIVVQAFN--EKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSST 174
TLT L +Y + + A N E+ P + + +V + P D+ A + T
Sbjct: 57 ---ITLTNLNPGTEYVVSIIAVNGREESPPLIGQQATVSDI-------PRDLEVIASTPT 106
Query: 175 SLSVTWQPPPLLLQ 188
SL ++W+PP + ++
Sbjct: 107 SLLISWEPPAVSVR 120
>pdb|3L5H|A Chain A, Crystal Structure Of The Full Ectodomain Of Human Gp130:
New Insights Into The Molecular Assembly Of Receptor
Complexes
Length = 589
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 28 VRVLAENSLGAGRPSDPLLVHTEAEPP-TAEPSGLHAVAIS-----SDSIRVTWSPPPAH 81
V V AEN+LG SD H +P +P+ H +++ S +++TW+ P
Sbjct: 173 VWVEAENALGKVT-SD----HINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPS-- 225
Query: 82 LTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLT--GLRKYRKYDIVVQAFN 139
+ + +L Y + YR + ++ ++ IP + ++ T L+ + +Y ++
Sbjct: 226 IKSVIILKYNIQYRTK-----DASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMK 280
Query: 140 EKGPG---PMSSEVSVQTLEDVPAAPPLDITCSALSST----SLSVTWQPPPLLLQNGEI 192
E G G S E S T ED P+ P S T ++ + W+ P NG+I
Sbjct: 281 EDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKI 340
Query: 193 LGYKV 197
L Y+V
Sbjct: 341 LDYEV 345
>pdb|3T1W|A Chain A, Structure Of The Four-Domain Fragment Fn7b89 Of Oncofetal
Fibronectin
Length = 375
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 24/181 (13%)
Query: 20 LLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSPPP 79
L P Y + V+ + G P+ L A PP P+ L I D++RVTW+PPP
Sbjct: 157 LEPGIDYDISVITLINGGESAPT--TLTQQTAVPP---PTDLRFTNIGPDTMRVTWAPPP 211
Query: 80 AHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFN 139
+ DL + + Y ++ + P SD A V LT L +Y + V +
Sbjct: 212 SI----DLTNFLVRYSPVK-NEEDVAELSISP--SDNAVV--LTNLLPGTEYVVSVSSVY 262
Query: 140 EKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
E+ ++ + P I S +++ S +V W P I GY++ +
Sbjct: 263 EQ-----HESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIAP-----RATITGYRIRH 312
Query: 200 E 200
Sbjct: 313 H 313
>pdb|1X4Y|A Chain A, Solution Structure Of The 3rd Fibronectin Type Iii Domain
From Mouse Biregional Cell Adhesion
Molecule-RelatedDOWN- Regulated Oncogenes (Cdon) Binding
Protein
Length = 114
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 54 PTAEPSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNR 113
P A P A++ +I + W PA N + G+Y+ YR + Y +
Sbjct: 8 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGD 67
Query: 114 SDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQT 154
+++ L+ YDI +Q FNE G S+ + +T
Sbjct: 68 ---RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICET 105
>pdb|4GO6|B Chain B, Crystal Structure Of Hcf-1 Self-Association Sequence 1
pdb|4GO6|D Chain D, Crystal Structure Of Hcf-1 Self-Association Sequence 1
Length = 232
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 18 QDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPSGLHAVAISSDSIRVTWSP 77
Q+L P T Y+ RV N+ G G S+ T P + ++ S D +TW P
Sbjct: 51 QELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIK-ISKSPDGAHLTWEP 109
Query: 78 PPAHLTNGDLLGY 90
P +T+G ++ Y
Sbjct: 110 P--SVTSGKIIEY 120
>pdb|2EE2|A Chain A, Solution Structures Of The Fn3 Domain Of Human Contactin 1
Length = 119
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 7 QNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTE 50
Q + E A L++LLP T Y + V A NS G G PSD + T+
Sbjct: 68 QVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTK 111
>pdb|2ZYZ|B Chain B, Pyrobaculum Aerophilum Splicing Endonuclease
pdb|2ZYZ|D Chain D, Pyrobaculum Aerophilum Splicing Endonuclease
Length = 183
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 140 EKGPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEIL 193
EKGPG + + V LE DIT S S+ TW +L Q GE++
Sbjct: 121 EKGPGIDHAPMVVVFLEPDKGISATDITRGGRLSHSVRKTWTLATVLRQTGEVV 174
>pdb|2JLL|A Chain A, Crystal Structure Of Ncam2 Igiv-Fn3ii
Length = 389
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 4 WK-SQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEAEPPTAEPS--G 60
WK ++ G + VL +L P T Y +RV A N G G S + T P EPS
Sbjct: 242 WKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT---LPVREPSPPS 298
Query: 61 LHAVAISSDSIRVTWSPPPAHLTNGD-----LLGYYLGYREQ 97
+H S S +++ +T D +L Y + YR +
Sbjct: 299 IHGQPSSGKSFKLS-------ITKQDDGGAPILEYIVKYRSK 333
>pdb|3TEU|A Chain A, Crystal Structure Of Fibcon
Length = 98
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYR-EQGFGRQNSYNFTTIPNRSDG 116
P+ L ++ SI V+W+PP A +T GY + Y G G T+P S
Sbjct: 5 PTDLQVTNVTDTSITVSWTPPSATIT-----GYRITYTPSNGPGEPKEL---TVPPSSTS 56
Query: 117 AGVATLTGLRKYRKYDIVVQAFNEKGPGP 145
T+TGL +Y + V A + P
Sbjct: 57 ---VTITGLTPGVEYVVSVYALKDNQESP 82
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Query: 163 PLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
P D+ + ++ TS++V+W PP + I GY++ Y
Sbjct: 5 PTDLQVTNVTDTSITVSWTPP-----SATITGYRITY 36
>pdb|3K2M|C Chain C, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
pdb|3K2M|D Chain D, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
Length = 101
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGA 117
P+ L VA + S+ ++W P +++ + Y + Y E G G FT +P S
Sbjct: 8 PTKLEVVAATPTSLLISWDAP---MSSSSVYYYRITYGETG-GNSPVQEFT-VPYSSS-- 60
Query: 118 GVATLTGLRKYRKYDIVVQAFNEKGPGPM 146
AT++GL Y I V A+ E G M
Sbjct: 61 -TATISGLSPGVDYTITVYAWGEDSAGYM 88
>pdb|2NZI|A Chain A, Crystal Structure Of Domains A168-A170 From Titin
pdb|2NZI|B Chain B, Crystal Structure Of Domains A168-A170 From Titin
Length = 305
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 4 WKSQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDP 44
W E + +L T Y+ RV+AEN G +PS+P
Sbjct: 245 WLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEP 285
>pdb|1WJ3|A Chain A, Solution Structure Of The Fourth Fn3 Domain Of Kiaa1496
Protein
Length = 117
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 142 GPGPMSSEVSVQTLEDVPAAPPLDITCSALSSTSLSVTWQPPPLLLQNGEILGYKVYY 199
G S V+V T + P+ PP ++ +A + T + + W+ + E+ GYKV+Y
Sbjct: 1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFY 57
>pdb|1TTF|A Chain A, The Three-Dimensional Structure Of The Tenth Type Iii
Module Of Fibronectin: An Insight Into Rgd-Mediated
Interactions
pdb|1TTG|A Chain A, The Three-Dimensional Structure Of The Tenth Type Iii
Module Of Fibronectin: An Insight Into Rgd-Mediated
Interactions
Length = 94
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 58 PSGLHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGA 117
P L VA + S+ ++W P + Y + Y E G G FT ++S
Sbjct: 5 PRDLEVVAATPTSLLISWDAPAVTVRY-----YRITYGETG-GNSPVQEFTVPGSKS--- 55
Query: 118 GVATLTGLRKYRKYDIVVQAFNEKGPGPMSSE 149
AT++GL+ Y I V A +G P SS+
Sbjct: 56 -TATISGLKPGVDYTITVYAVTGRGDSPASSK 86
>pdb|2DN7|A Chain A, Solution Structures Of The 6th Fn3 Domain Of Human
Receptor- Type Tyrosine-Protein Phosphatase F
Length = 107
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 73 VTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYD 132
+ W PP G+LLGY L Y R N+ +F + D T+TGL K Y
Sbjct: 25 LQWHPPKE--LPGELLGYRLQYCRADEARPNTIDF----GKDDQH--FTVTGLHKGTTYI 76
Query: 133 IVVQAFNEKGPGPMSSEVSVQTLEDV 158
+ A N G G E ++T ED+
Sbjct: 77 FRLAAKNRAGLGE-EFEKEIRTPEDL 101
>pdb|2EDE|A Chain A, Solution Structure Of The Sixth Fibronectin Type Iii
Domain Of Human Netrin Receptor Dcc
Length = 114
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 9 SGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT 49
SG + DL T+Y R+ A NS G G SDP+L T
Sbjct: 65 SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRT 105
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Query: 54 PTAEPSGLHAVAISSD--SIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIP 111
PT+ P L + ++ V+W PP NG + Y L Y + + TI
Sbjct: 8 PTSAPKDLTVITREGKPRAVIVSWQPPLE--ANGKITAYILFYTLDKNIPIDDWIMETI- 64
Query: 112 NRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLE 156
S + L Y +QA N KG GP+S + +TL+
Sbjct: 65 --SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLK 107
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 159 PAAPPLDITCSALSST--SLSVTWQPPPLLLQNGEILGYKVYYENMRELPM 207
P + P D+T ++ V+WQPP L NG+I Y ++Y + +P+
Sbjct: 8 PTSAPKDLTVITREGKPRAVIVSWQPP--LEANGKITAYILFYTLDKNIPI 56
>pdb|2EKJ|A Chain A, Solution Structures Of The Fn3 Domain Of Human Collagen
Alpha-1(Xx) Chain
Length = 105
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 17/96 (17%)
Query: 69 DSIRVTWSPPPAHLTNGDLLGYYLGYR-EQGFGRQNSYNFTTIPN-RSDGAGVATLTGLR 126
DS++V+W+PP G +L Y+L Y G G + S ++P RS TL L+
Sbjct: 22 DSLQVSWTPP-----LGRVLHYWLTYAPASGLGPEKS---VSVPGARSH----VTLPDLQ 69
Query: 127 KYRKYDIVVQAFNEKGPGPMSSEVSVQTLEDVPAAP 162
KY ++V A G S VS P+ P
Sbjct: 70 AATKYRVLVSAIYAAG---RSEAVSATGQTACPSGP 102
>pdb|2DB8|A Chain A, Solution Structures Of The Fn3 Domain Of Human Tripartite
Motif Protein 9
Length = 110
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 25/104 (24%)
Query: 61 LHAVAISSDSIRVTWSPPPAHLTNGDLLGYYL--------GYREQGFGRQNSYNFTTIPN 112
L ++S ++W PP D GY L +RE G++
Sbjct: 17 LEECCTHNNSATLSWKQPPLSTVPAD--GYILELDDGNGGQFREVYVGKET--------- 65
Query: 113 RSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGPMSSEVSVQTLE 156
+ T+ GL Y+ V+AFN+ G P S + +QT E
Sbjct: 66 ------MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSE 103
>pdb|2DOC|A Chain A, Solution Structure Of The Fibronectin Type-Iii Domain Of
Human Neural Cell Adhesion Molecule 2
Length = 119
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 4 WK-SQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT 49
WK ++ G + VL +L P T Y +RV A N G G S + T
Sbjct: 64 WKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT 110
>pdb|1WK0|A Chain A, Solution Structure Of Fibronectin Type Iii Domain Derived
From Human Kiaa0970 Protein
Length = 137
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 1 DVEWKSQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT 49
D ++KS G E L DL PA Y +V AE + G PS+ + T
Sbjct: 70 DGKYKSVYVGEETNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTT 118
>pdb|2XYC|A Chain A, Crystal Structure Of Ncam2 Igiv-Fn3i
Length = 291
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 4 WK-SQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT 49
WK ++ G + VL +L P T Y +RV A N G G S + T
Sbjct: 242 WKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT 288
>pdb|1FNA|A Chain A, Crystal Structure Of The Tenth Type Iii Cell Adhesion
Module Of Human Fibronectin
Length = 91
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 61 LHAVAISSDSIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVA 120
L VA + S+ ++W P + Y + Y E G G FT ++S A
Sbjct: 3 LEVVAATPTSLLISWDAPAVTVRY-----YRITYGETG-GNSPVQEFTVPGSKS----TA 52
Query: 121 TLTGLRKYRKYDIVVQAFNEKGPGPMSSE 149
T++GL+ Y I V A +G P SS+
Sbjct: 53 TISGLKPGVDYTITVYAVTGRGDSPASSK 81
>pdb|1X5L|A Chain A, Solution Structure Of The Second Fn3 Domain Of Eph
Receptor A8 Protein
Length = 111
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 70 SIRVTWSPPPAHLTNGDLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYR 129
S+ + W P NG +L Y + Y E+ Q+ + R AT++GL+
Sbjct: 26 SVSLLWQEP--EQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTR------ATVSGLKPGT 77
Query: 130 KYDIVVQAFNEKGPGPMSSEVSVQT 154
+Y V+A G G S + V+T
Sbjct: 78 RYVFQVRARTSAGCGRFSQAMEVET 102
>pdb|2DM4|A Chain A, Solution Structure Of The Second Fn3 Domain Of Human
SorlaLR11
Length = 108
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 4 WKSQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT 49
W SQ + + + +++LL TLY VRV A S G G SD + T
Sbjct: 55 WASQRAAS-NFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITT 99
>pdb|2CRM|A Chain A, Solution Structure Of The Forth Fniii Domain Of Human
Length = 120
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 3 EWKSQNSGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSDPLLVHTEA 51
+W+ SG + + L P YR+RV + G S+ LLV T A
Sbjct: 65 KWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPA 113
>pdb|2DJU|A Chain A, Solution Structures Of The Fn3 Domain Of Human Receptor-
Type Tyrosine-Protein Phosphatase F
Length = 106
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 17 LQDLLPATLYRVRVLAENSLGAGRPSDPLLVHT 49
+ L P + Y RVLA NS+G G PS+ + T
Sbjct: 65 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRART 97
>pdb|4DLP|A Chain A, Crystal Structure Of Methionyl-Trna Synthetase Metrs From
Brucella Melitensis Bound To Selenomethionine
pdb|4DLP|B Chain B, Crystal Structure Of Methionyl-Trna Synthetase Metrs From
Brucella Melitensis Bound To Selenomethionine
pdb|4DLP|C Chain C, Crystal Structure Of Methionyl-Trna Synthetase Metrs From
Brucella Melitensis Bound To Selenomethionine
Length = 536
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 86 DLLGYYLGYREQGFGRQNSYNFTTIPNRSDGAGVATLTGLRKYRKYDIVVQAFNEKGPGP 145
D L Y+L RE FG+ SY+ I NR++ A +A G R ++ + K P P
Sbjct: 342 DQLRYFL-MREVPFGQDGSYSHEAIVNRTN-ADLANDLGNLAQRSLSMIAKNCEGKVPQP 399
Query: 146 MS-SEVSVQTLEDVPAAPPLDITCSALSSTSLSVT 179
+ SE L+ AA L+ A+ +L +
Sbjct: 400 GAFSEADKAILDQADAA--LETARKAMDDQALHLA 432
>pdb|1UEY|A Chain A, Solution Structure Of The First Fibronectin Type Iii
Domain Of Human Kiaa0343 Protein
Length = 127
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 4 WKSQN--SGTEQWAVLQDLLPATLYRVRVLAENSLGAGRPSD 43
W Q SGT+ A L +L P Y RV+A NS+G PS+
Sbjct: 64 WHHQTEVSGTQTTAQL-NLSPYVNYSFRVMAVNSIGKSLPSE 104
>pdb|3B83|A Chain A, Tba
pdb|3B83|B Chain B, Tba
pdb|3B83|C Chain C, Tba
pdb|3B83|D Chain D, Tba
pdb|3B83|E Chain E, Tba
pdb|3B83|F Chain F, Tba
pdb|3B83|G Chain G, Tba
pdb|3B83|H Chain H, Tba
Length = 100
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 162 PPLDITCSALSSTSLSVTWQPPPL 185
PP +I + ++ T+ VTWQPP L
Sbjct: 4 PPFNIKVTNITLTTAVVTWQPPIL 27
>pdb|2EDD|A Chain A, Solution Structure Of The Fifth Fibronectin Type Iii
Domain Of Human Netrin Receptor Dcc
Length = 123
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 54 PTAEPSGLHAVAISSDSIRVTWS 76
P P G+ AVA++ D++RV+W+
Sbjct: 18 PMLPPVGVQAVALTHDAVRVSWA 40
>pdb|1JC9|A Chain A, Tachylectin 5a From Tachypleus Tridentatus (Japanese
Horseshoe Crab)
Length = 269
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 88 LGYYLGYREQGFGRQNSYNFTTIPNRSD 115
+G Y G FGR N +NF+TI D
Sbjct: 173 IGNYSGDAGNSFGRHNGHNFSTIDKDHD 200
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,027,174
Number of Sequences: 62578
Number of extensions: 292224
Number of successful extensions: 731
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 572
Number of HSP's gapped (non-prelim): 157
length of query: 209
length of database: 14,973,337
effective HSP length: 94
effective length of query: 115
effective length of database: 9,091,005
effective search space: 1045465575
effective search space used: 1045465575
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 49 (23.5 bits)