BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14542
(371 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VS29|DSCL_DROME Down syndrome cell adhesion molecule-like protein Dscam2
OS=Drosophila melanogaster GN=Dscam2 PE=2 SV=3
Length = 2074
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 145 VLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLL 204
V V+ V +Y DGK+H+L +GEL+IH + ESD +S++CR +++LT ++
Sbjct: 162 VRVVSWVHEPAIYIYPSLQGDGKFHLLPTGELLIHNLQESDESQSFRCRSMHRLTRQVVV 221
Query: 205 SVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDS--- 261
S + RL + ++ ++S + + E + V +DE +L C AQG P P W+ +
Sbjct: 222 S-SPTRLRINSHRGIISPS-VVEHTAHVQVSQDEGAVLLCVAQGCPSPEYSWFTHNGAGP 279
Query: 262 -PVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGE 320
PV R++ +G L+I V DSGV+ C A N G+ +L + A +S
Sbjct: 280 LPVLSGPRVRLLGPILAIEAVTGEDSGVYKCTAGNVGGEASAELRLTVATPIQVEISPNV 339
Query: 321 LIIHQVDEKNKRLL 334
L +H R L
Sbjct: 340 LSVHMGGTAEFRCL 353
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 63/259 (24%)
Query: 60 VLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGEL---VEIASSNQVVVDVGHRIEL 116
+L ++ V ED+G+Y+C +A + + SA++ L VEI S N + V +G E
Sbjct: 294 ILAIEAVTGEDSGVYKC--TAGNVGGEASAELRLTVATPIQVEI-SPNVLSVHMGGTAEF 350
Query: 117 HCRV----SPKRLSSAKAWLKDGLVLRRNS--DEVLVLDRVQREDAGMYQCHIEDGKYHM 170
C V SP + + W KDG L + ++ LV+ RV RE+ GMYQC +
Sbjct: 351 RCLVTSNGSPVGMQNI-LWYKDGRQLPSSGRVEDTLVVPRVSRENRGMYQCVVRR----- 404
Query: 171 LSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHR 230
E D +++ L L + +L + + +
Sbjct: 405 -----------PEGDTFQA------------------TAELQLGDAPPVLLYSFIEQ--- 432
Query: 231 ILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG----------SSLSISH 280
++ +V L CSA GNP P I W P+ + R IG S ++ISH
Sbjct: 433 --TLQPGPAVSLKCSAAGNPTPQISWTLDGFPLPSNGRFM-IGQYITVHGDVISHVNISH 489
Query: 281 VEESDSGVWNCVANNSEGQ 299
V D G + C+A N G+
Sbjct: 490 VMVEDGGEYACIAENRAGR 508
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 133/322 (41%), Gaps = 71/322 (22%)
Query: 2 QLFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRV----SPKRLSSAKAWLKDGLVLRRNS 57
+L + V + + +E+SP+ + V +G E C V SP + + W KDG L +
Sbjct: 322 ELRLTVATPIQVEISPN-VLSVHMGGTAEFRCLVTSNGSPVGMQNI-LWYKDGRQLPSSG 379
Query: 58 --DEVLVLDRVQREDAGMYQCHV-SADDDSAQMSAQVILG-GELVEIASSNQVVVDVGHR 113
++ LV+ RV RE+ GMYQC V + D+ Q +A++ LG V + S + + G
Sbjct: 380 RVEDTLVVPRVSRENRGMYQCVVRRPEGDTFQATAELQLGDAPPVLLYSFIEQTLQPGPA 439
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV--------------LDRVQREDAGMY 159
+ L C + + +W DG L N ++ + V ED G Y
Sbjct: 440 VSLKCSAA-GNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEY 498
Query: 160 QCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRL 219
C E+ + + L I+ + R + K+T S
Sbjct: 499 ACIAENRAGRVQHAARLNIYGLP--------YIRLIPKVTAVS----------------- 533
Query: 220 LSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYK--QDSPVEESDRIQRIGSSLS 277
E++ L C G P+ I W + ++ P + R+Q G SL+
Sbjct: 534 -----------------GETLNLKCPVAGYPIEEIHWERGGRELPDDIRQRVQPDG-SLT 575
Query: 278 ISHVEE-SDSGVWNCVANNSEG 298
IS V++ SDSGV+ C A N +G
Sbjct: 576 ISPVQKNSDSGVYTCWARNKQG 597
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 32/139 (23%)
Query: 233 NVKKDESVILPCSAQGNPLPTIKWYKQDSP-------VEESDRIQRIGS-SLSISHVEES 284
NV+++ ++L C AQG P P+I W K V E + +G+ SL + HV+E
Sbjct: 717 NVERNRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKED 776
Query: 285 DSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHR 344
G + C ANN G G++I +V+ S+ R
Sbjct: 777 REGFYLCQANNGIGT-----------------GIGKVIQLKVN-------SSPYFSSTSR 812
Query: 345 ILNVKKDESVILPCSAQGN 363
+ VKK ++ +L C+ G+
Sbjct: 813 SVMVKKGDTALLQCAVSGD 831
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 146 LVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLS 205
+V + +G Y+ E +L +G L++ V E DR Y C+ N + G +
Sbjct: 738 IVWKKATGSKSGEYEEVRERPFTKLLGNGSLLLQHVKE-DREGFYLCQANNGI-GTGIGK 795
Query: 206 VNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQD----S 261
V + L N S+ R + VKK ++ +L C+ G+ I W + +
Sbjct: 796 V----IQLKVN----SSPYFSSTSRSVMVKKGDTALLQCAVSGDKPINIVWMRSGKNTLN 847
Query: 262 P-------VEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQD 300
P V++ + + L I V+ +DSG + C A+N G D
Sbjct: 848 PSTNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGND 893
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESD--RIQRIGSS-LSISHVEESDSGVWNCVANN 295
+V LPC+A G P +W+K D + + Q + S L IS ++ +D G ++C +N
Sbjct: 1329 TVTLPCTAVGKP--KREWFKSDVALRQGGLHNSQLLDSGDLIISSLQLADGGNYSCQVDN 1386
Query: 296 SEGQDKM 302
G D++
Sbjct: 1387 GIGTDRL 1393
Score = 31.6 bits (70), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 242 LPCSAQGNPLPTIKWYKQD-SPVEESDRIQRI---GSSL-----SISHVEESDSGVWNCV 292
L CSA G+P PT+ W D S V E ++R+ G+ + + ++ ++ + ++ C+
Sbjct: 51 LDCSASGSPQPTVDWVHADGSAVTEIHGVRRVLRNGTLVLMPFAAAAYHQDVHNTIYRCI 110
Query: 293 ANNSEGQ 299
A+NS G+
Sbjct: 111 ASNSVGR 117
>sp|O94779|CNTN5_HUMAN Contactin-5 OS=Homo sapiens GN=CNTN5 PE=2 SV=2
Length = 1100
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 45/254 (17%)
Query: 55 RNSDEVLVLDRVQREDAGMYQCHV--SADDDSAQMSAQVILGGELVEIASSNQVVVDVGH 112
R S VL + VQ +DAG+Y+C S +S + QV VE + Q+ D G
Sbjct: 348 RKSQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQL--DSGS 405
Query: 113 RIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLS 172
+ C+ + K + + WLK+G+ L S RV+ +
Sbjct: 406 PLRWECKATGKPRPTYR-WLKNGVPLSPQS-------RVE------------------MV 439
Query: 173 SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMF---EKH 229
+G L+IH V++SD YQC NK G + + ++L++A F +
Sbjct: 440 NGVLMIHNVNQSDA-GMYQCLAENKY----------GAIYASAELKILASAPTFALNQLK 488
Query: 230 RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG-SSLSISHVEESDSGV 288
+ + V KD+ V++ C QG+P PTI W K D V E+ RI + SL I + +SD G
Sbjct: 489 KTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGK 548
Query: 289 WNCVANNSEGQDKM 302
+ C N G ++
Sbjct: 549 YVCRGENVFGSAEI 562
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 129/330 (39%), Gaps = 86/330 (26%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQ-MSAQVILG-------GEL---VEIASSNQVVVD 109
L + +VQ D G Y C V +A+ +S L GE +E+ V
Sbjct: 254 LYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA 313
Query: 110 VGHRIELHCRVSPKRLSSAKAWLK-DGLVLR----RNSDEVLVLDRVQREDAGMYQCHIE 164
G +++ C + + W+K +G + R S VL + VQ +DAG+Y+C E
Sbjct: 314 KGTTVKMECFALGNPVPTI-TWMKVNGYIPSKARLRKSQAVLEIPNVQLDDAGIYECRAE 372
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+ RG N RG+L ++ +
Sbjct: 373 N--------------------------SRGKNSF---------RGQL------QVYTYPH 391
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEES 284
EK + + C A G P PT +W K P+ R++ + L I +V +S
Sbjct: 392 WVEKLNDTQLDSGSPLRWECKATGKPRPTYRWLKNGVPLSPQSRVEMVNGVLMIHNVNQS 451
Query: 285 DSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF---E 341
D+G++ C+A N G + +S EL ++L++A F +
Sbjct: 452 DAGMYQCLAENKYGA---------------IYASAEL----------KILASAPTFALNQ 486
Query: 342 KHRILNVKKDESVILPCSAQGNPLPTIKYR 371
+ + V KD+ V++ C QG+P PTI ++
Sbjct: 487 LKKTIIVTKDQEVVIECKPQGSPKPTISWK 516
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 231 ILNVKKDES-VILPCSAQGNPLPTIKWYKQDSPVE-ESD-RIQRIGSSLSISHVEES-DS 286
I DE V L C +GNP+P+ +W + + ++ ESD R I + IS+ E+ DS
Sbjct: 109 IFPTDSDEKKVALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDS 168
Query: 287 GVWNCVANNSEG 298
G + C+A N+ G
Sbjct: 169 GHYQCLATNTVG 180
>sp|Q90W79|CNTN5_CHICK Contactin-5 OS=Gallus gallus GN=CNTN5 PE=1 SV=1
Length = 1027
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 105/254 (41%), Gaps = 45/254 (17%)
Query: 55 RNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRI 114
R S VL + VQ EDAGMY+C Q+ + + N +D G ++
Sbjct: 275 RKSQAVLEIPNVQLEDAGMYECKAENSRGRNVFRGQLQVYTYPQWVEKLNDTELDSGEQL 334
Query: 115 ELHCRVSPKRLSSAKAWLKDGLVLRRNS-----DEVLVLDRVQREDAGMYQCHIEDGKYH 169
C+ + K + + WLK+G+ L S + VL++ V DAGMYQC E+
Sbjct: 335 RWECKATGKPRPTYR-WLKNGVPLWPQSRIEMINSVLMIRTVNISDAGMYQCLAENKYGT 393
Query: 170 MLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH 229
+ +S EL I L A +N+ R
Sbjct: 394 IYASAELKI-------------------LASAPTFPLNQMR------------------- 415
Query: 230 RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG-SSLSISHVEESDSGV 288
+ + + K + V++ C Q +P PTI W K D + ES R+ + SL I + +SD G
Sbjct: 416 KTIIITKGQEVVIECKPQASPKPTITWKKGDKALRESKRVTILPQGSLRILNASKSDEGR 475
Query: 289 WNCVANNSEGQDKM 302
++C N G ++
Sbjct: 476 YSCRGVNVFGSAEI 489
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 126/330 (38%), Gaps = 86/330 (26%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQ-MSAQVILG-------GEL---VEIASSNQVVVD 109
L + +VQ D G Y C V +A+ +S L GE +E+ V
Sbjct: 181 LYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTAA 240
Query: 110 VGHRIELHCRVSPKRLSSAKAWLK-----DGLVLRRNSDEVLVLDRVQREDAGMYQCHIE 164
G +++ C + + +W K R S VL + VQ EDAGMY+C E
Sbjct: 241 RGTTVKMECFALGNPVPTI-SWKKVNGHNPSKARLRKSQAVLEIPNVQLEDAGMYECKAE 299
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+ RG N V RG+L ++ + +
Sbjct: 300 N--------------------------SRGRN---------VFRGQL------QVYTYPQ 318
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEES 284
EK + E + C A G P PT +W K P+ RI+ I S L I V S
Sbjct: 319 WVEKLNDTELDSGEQLRWECKATGKPRPTYRWLKNGVPLWPQSRIEMINSVLMIRTVNIS 378
Query: 285 DSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF---E 341
D+G++ C+A N G + +S EL ++L++A F +
Sbjct: 379 DAGMYQCLAENKYGT---------------IYASAEL----------KILASAPTFPLNQ 413
Query: 342 KHRILNVKKDESVILPCSAQGNPLPTIKYR 371
+ + + K + V++ C Q +P PTI ++
Sbjct: 414 MRKTIIITKGQEVVIECKPQASPKPTITWK 443
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 173 SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRIL 232
+G L I +V SD SY C N +T A +LS L+L + + E H
Sbjct: 178 TGNLYISKVQTSD-VGSYICLVKNTVTNARVLSPPT-PLTLRNDGVMGEYEPKIEVHFPY 235
Query: 233 NVK--KDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWN 290
V + +V + C A GNP+PTI W K + R+++ + L I +V+ D+G++
Sbjct: 236 TVTAARGTTVKMECFALGNPVPTISWKKVNGHNPSKARLRKSQAVLEIPNVQLEDAGMYE 295
Query: 291 CVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKK 350
C A NS G++ + G+L ++ + + EK +
Sbjct: 296 CKAENSRGRNVFR---------------GQLQVY----------TYPQWVEKLNDTELDS 330
Query: 351 DESVILPCSAQGNPLPTIKY 370
E + C A G P PT ++
Sbjct: 331 GEQLRWECKATGKPRPTYRW 350
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 130/339 (38%), Gaps = 78/339 (23%)
Query: 23 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNS-----DEVLVLDRVQREDAGMYQCH 77
+D G ++ C+ + K + + WLK+G+ L S + VL++ V DAGMYQC
Sbjct: 328 LDSGEQLRWECKATGKPRPTYR-WLKNGVPLWPQSRIEMINSVLMIRTVNISDAGMYQCL 386
Query: 78 VSADDDSAQMSAQVILGGELVEIASS-----NQ----VVVDVGHRIELHCR--VSPKRLS 126
+ SA EL +AS+ NQ +++ G + + C+ SPK
Sbjct: 387 AENKYGTIYASA------ELKILASAPTFPLNQMRKTIIITKGQEVVIECKPQASPK--- 437
Query: 127 SAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDR 186
W K LR E + +L G L I +SD
Sbjct: 438 PTITWKKGDKALR------------------------ESKRVTILPQGSLRILNASKSDE 473
Query: 187 YRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSA 246
R Y CRGVN A +++ +S+ E R+ K E + ES++L C A
Sbjct: 474 GR-YSCRGVNVFGSAEIVA----SVSVKEPTRIELTPKKIE------LTVGESIVLSCKA 522
Query: 247 QGNPL--PTIKWYKQDSPVE--------ESDRIQRIGSSLSISHVEESDSGVWNCVANNS 296
+ T W P++ ES + Q + L I ++ +G + C +
Sbjct: 523 LHDSTLDVTFYWTLNGQPIDFDKEDGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTA 582
Query: 297 EG--QDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRL 333
D+ +L ++ G G +I+ ++ + L
Sbjct: 583 ADAVSDETELLVRGPPGP-----PGVVIVEEITDTTATL 616
Score = 38.9 bits (89), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVE-ESD-RIQRIGSSLSISHVEE-SDSGVWNCV 292
+++ V L C A G+P PT +W + + ++ ESD R I SL IS+ E DSG + C+
Sbjct: 42 EEKKVSLNCQAHGSPTPTYRWLRNGTEIDVESDYRYSLIEGSLIISNPNEMKDSGQYQCL 101
Query: 293 ANNSEGQD-KMQLFIQYAH 310
N G + +Q+A+
Sbjct: 102 TTNMFGSILSREAVLQFAY 120
>sp|O60469|DSCAM_HUMAN Down syndrome cell adhesion molecule OS=Homo sapiens GN=DSCAM PE=1
SV=2
Length = 2012
Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 64/295 (21%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDGLVLR-----RNSDEVLVLDRVQREDAGMYQCHVSA 80
G R+EL C+ + WLKD + L + + L+++ ++ D+G Y C VS
Sbjct: 239 GQRVELPCKALGHPEPDYR-WLKDNMPLELSGRFQKTVTGLLIENIRPSDSGSYVCEVSN 297
Query: 81 DDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRR 140
+A++ ++ + L S +V VG ++ L C V+ +W ++G +L
Sbjct: 298 RYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTE-DQELSWYRNGEILNP 356
Query: 141 NSD--------EVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQC 192
+ E L++D + + D G YQC + K LS+ + + QV D
Sbjct: 357 GKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDK---LSAQDYV--QVVLED------- 404
Query: 193 RGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLP 252
G K+ A +++++S A E V L C+ +G PLP
Sbjct: 405 -GTPKIISAF-------------SEKVVSPA--------------EPVSLMCNVKGTPLP 436
Query: 253 TIKWYKQDSPVEE--SDRIQRIGSS-------LSISHVEESDSGVWNCVANNSEG 298
TI W D P+ + S RI ++ +S L+IS + D GV+ C ANNS G
Sbjct: 437 TITWTLDDDPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAG 491
Score = 66.2 bits (160), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA 222
+ ++ + S+G L I V D +Y+C ++ TG + S N RL +++ SA
Sbjct: 168 VSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS-NSARLFVSDPAN--SA 224
Query: 223 AKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVE 282
+ + + V LPC A G+P P +W K + P+E S R Q+ + L I ++
Sbjct: 225 PSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENIR 284
Query: 283 ESDSGVWNCVANNSEGQDKM 302
SDSG + C +N G K+
Sbjct: 285 PSDSGSYVCEVSNRYGTAKV 304
Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 118/313 (37%), Gaps = 71/313 (22%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSD------ 58
+ VK L +SP +V VG ++ L C V+ +W ++G +L +
Sbjct: 308 LYVKQPLKATISPR-KVKSSVGSQVSLSCSVTGTE-DQELSWYRNGEILNPGKNVRITGI 365
Query: 59 --EVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASS-NQVVVDVGHRIE 115
E L++D + + D G YQC V D SAQ QV+L +I S+ ++ VV +
Sbjct: 366 NHENLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVS 425
Query: 116 LHCRVSPKRLSSAKAWLKDGLVLRRNSDEV-------------LVLDRVQREDAGMYQCH 162
L C V L + L D +L+ S + L + Q D G+Y+C
Sbjct: 426 LMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGNVVSYLNISSSQVRDGGVYRCT 485
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVN-RGRLSLTENKRLLS 221
+ S+G ++ YQ R +N RG S+ K + +
Sbjct: 486 ANN------SAGVVL------------YQAR------------INVRGPASIRPMKNITA 515
Query: 222 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDS--PVEESDRIQRIGSSLSIS 279
A + C G P +IKWYK + P +L +S
Sbjct: 516 IA-------------GRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLS 562
Query: 280 HVE-ESDSGVWNC 291
V+ E D G + C
Sbjct: 563 DVQKEVDEGEYTC 575
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 82/323 (25%), Positives = 119/323 (36%), Gaps = 67/323 (20%)
Query: 2 QLFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV- 60
Q I V+ SI P + G +HCRV S K W K+ +L N +V
Sbjct: 496 QARINVRGPASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIK-WYKNSNLLPFNHRQVA 552
Query: 61 ------LVLDRVQRE-DAGMYQCHVSADDD-SAQMSAQVILGGELVEIASSNQVV----V 108
L L VQ+E D G Y C+V S S V V++ Q
Sbjct: 553 FENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVT-----VKVPPFIQPFEFPRF 607
Query: 109 DVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKY 168
+G R+ + C V L W KDG +
Sbjct: 608 SIGQRVFIPCVVVSGDLPITITWQKDGRPI------------------------------ 637
Query: 169 HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLL---SAAKM 225
G L + +D D S + ++ + + + R + E++ L K
Sbjct: 638 ----PGSLGV-TIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKF 692
Query: 226 FEKHRILNVKKDESVILPCSAQGNPLPTIKW-------YKQDSPVEESDRIQRIGS-SLS 277
+ R + ++VIL CSA+G P+PTI W Q P+ + RIQ + + SL
Sbjct: 693 VVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLL 752
Query: 278 ISHVEESDSGVWNCVANNSEGQD 300
I HV E DSG + C +N G D
Sbjct: 753 IKHVVEEDSGYYLCKVSNDVGAD 775
Score = 50.1 bits (118), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 238 ESVILPCSAQGNPLPTIKWYKQDSPVE-----ESDRIQRIGSSLSISHVEESDSGVWNCV 292
+ ++LPC A G+P P +KW K + + R S I V+ DSG ++C+
Sbjct: 1301 KDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCI 1360
Query: 293 ANNSEGQDKMQLFIQ 307
ANN+ G D++ L +Q
Sbjct: 1361 ANNNWGSDEIILNLQ 1375
Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats.
Identities = 86/384 (22%), Positives = 133/384 (34%), Gaps = 96/384 (25%)
Query: 15 MSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV-------------L 61
+S + VV + L C V L + L D +L+ S + L
Sbjct: 410 ISAFSEKVVSPAEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGNVVSYL 469
Query: 62 VLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS 121
+ Q D G+Y+C + A++ + G I + G +HCRV
Sbjct: 470 NISSSQVRDGGVYRCTANNSAGVVLYQARINVRGP-ASIRPMKNITAIAGRDTYIHCRVI 528
Query: 122 PKRLSSAKAWLKDGLVLRRNSDEV-------LVLDRVQRE-DAGMYQCHIEDGKYHMLSS 173
S K W K+ +L N +V L L VQ+E D G Y C++
Sbjct: 529 GYPYYSIK-WYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNV---------- 577
Query: 174 GELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILN 233
L+ Q+ S S+ ++ + FE R
Sbjct: 578 --LVQPQLSTSQ--------------------------SVHVTVKVPPFIQPFEFPRF-- 607
Query: 234 VKKDESVILPCSAQGNPLP-TIKWYKQDSPVEES-----DRIQRIGSSLSISHVEESDSG 287
+ V +PC LP TI W K P+ S D I SSL IS++ +G
Sbjct: 608 -SIGQRVFIPCVVVSGDLPITITWQKDGRPIPGSLGVTIDNID-FTSSLRISNLSLMHNG 665
Query: 288 VWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILN 347
+ C+A N + Q +LI+ K + R +
Sbjct: 666 NYTCIARNEAAAVEHQ---------------SQLIVR----------VPPKFVVQPRDQD 700
Query: 348 VKKDESVILPCSAQGNPLPTIKYR 371
++VIL CSA+G P+PTI ++
Sbjct: 701 GIYGKAVILNCSAEGYPVPTIVWK 724
Score = 40.8 bits (94), Expect = 0.016, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 98/265 (36%), Gaps = 68/265 (25%)
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHM 170
G R+EL C+ + WLKD + L + G++
Sbjct: 239 GQRVELPCKALGHPEPDYR-WLKDNMPLELS------------------------GRFQK 273
Query: 171 LSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHR 230
+G L+I + SD SY C N+ A ++ GRL + K+ L A R
Sbjct: 274 TVTG-LLIENIRPSDS-GSYVCEVSNRYGTAKVI----GRLYV---KQPLKATI---SPR 321
Query: 231 ILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG---SSLSISHVEESDSG 287
+ V L CS G + WY+ + ++ G +L + H+ +SD G
Sbjct: 322 KVKSSVGSQVSLSCSVTGTEDQELSWYRNGEILNPGKNVRITGINHENLIMDHMVKSDGG 381
Query: 288 VWNCVANNSE--GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRI 345
+ C + QD +Q+ ++ K II EK ++S A
Sbjct: 382 AYQCFVRKDKLSAQDYVQVVLEDGTPK---------IISAFSEK---VVSPA-------- 421
Query: 346 LNVKKDESVILPCSAQGNPLPTIKY 370
E V L C+ +G PLPTI +
Sbjct: 422 ------EPVSLMCNVKGTPLPTITW 440
Score = 37.0 bits (84), Expect = 0.26, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 33/160 (20%)
Query: 165 DGKYHMLSSGELII-HQVDESDRYRSYQCRGVNKL----TGASLLSVN-RGRLSLTENKR 218
+G+ +LS+G L+I H V+E Y Y C+ N + + + L+V ++ N
Sbjct: 740 NGRIQVLSNGSLLIKHVVEEDSGY--YLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTT 797
Query: 219 LLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQD---SP------VEESDRI 269
L + + KK+ S C+A G ++W K+D +P V +
Sbjct: 798 LATQGQ----------KKEMS----CTAHGEKPIIVRWEKEDRIINPEMARYLVSTKEVG 843
Query: 270 QRIGSSLSISHVEESDSGVWNCVANNSEGQDK--MQLFIQ 307
+ + S+L I DSG ++C A NS G+D+ +QL +Q
Sbjct: 844 EEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQ 883
Score = 33.1 bits (74), Expect = 3.8, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 18/122 (14%)
Query: 57 SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASS--NQVVVDVGHRI 114
S+ L++ V ED+G Y C VS +D A +S + L ++ + +S N + G +
Sbjct: 747 SNGSLLIKHVVEEDSGYYLCKVS-NDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKK 805
Query: 115 ELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDR--------------VQREDAGMYQ 160
E+ C ++ + W K+ ++ LV + RED+G +
Sbjct: 806 EMSCTAHGEKPIIVR-WEKEDRIINPEMARYLVSTKEVGEEVISTLQILPTVREDSGFFS 864
Query: 161 CH 162
CH
Sbjct: 865 CH 866
>sp|A2AJ76|HMCN2_MOUSE Hemicentin-2 OS=Mus musculus GN=Hmcn2 PE=1 SV=1
Length = 5100
Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats.
Identities = 110/430 (25%), Positives = 168/430 (39%), Gaps = 103/430 (23%)
Query: 17 PSGQVVVDVGHRIELHCRVSPKRLSSAKAWLK-DGLVL---------RRNSDEVLVLDRV 66
P V V++G + L CR + R W + DG L +R+S VLV +RV
Sbjct: 792 PPQDVTVELGKSVFLTCRAT-GRPPPIVTWRRGDGQALEPGRGSRTGQRDSG-VLVFERV 849
Query: 67 QREDAGMYQCHVSADDDSAQMSAQVILGGEL-VEIASSNQVV-VDVGHRIELHCRVSPKR 124
ED Y C AQ A++++ G +IA+S VV V G + L C + R
Sbjct: 850 SLEDQAPYVCEARNVFGKAQAEARLVVTGHAPPQIANSASVVRVLEGQPVSLTCVILAGR 909
Query: 125 LSSAKAWLKDGLVL------RRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+ WLK G L +D L LDR +EDAG Y C + EL++
Sbjct: 910 PLPERRWLKAGSPLPPGNRHAVRADGSLHLDRALQEDAGRYSCVATNVAGSQHRDVELVV 969
Query: 179 -----------HQVDESDRYRSYQC-------------RGVNKLTGASLLSVNR-GRLSL 213
H V S C + N LT + SV+R G L +
Sbjct: 970 QVPPRIHPTSTHHVTNEGVPASLPCIASGVPTPKITWTKETNALTTSGHYSVSRNGTLVI 1029
Query: 214 TE--------------NKRLLSAAKMF----EKHRI-------------LNVKKDESVIL 242
+ N S+ +M+ K I + VK E V L
Sbjct: 1030 VQPSPQDAGAYVCTATNSVGFSSQEMWLSVNTKPMIKMNGSQAVDVPLRVTVKAGEEVTL 1089
Query: 243 PCSAQGNPLPTIKWYKQDSP-VEESDRIQRIGS-SLSISHVEESDSGVWNCVANNSEGQD 300
C AQG+P P + W K +P + ++R + + S SL ++ + D+G++ C A+N G
Sbjct: 1090 DCEAQGSPTPLLTWTKDANPLLPVTNRYELLPSGSLRLAQAQVGDNGLYGCTASNPAG-- 1147
Query: 301 KMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSA 360
A + ++L R+ ++ R+L V E++ L C A
Sbjct: 1148 --------ATSRRYVL---------------RVQVPPQVQPGPRVLKVLAGEALDLNCVA 1184
Query: 361 QGNPLPTIKY 370
+GNP P + +
Sbjct: 1185 EGNPQPQLNW 1194
Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 130/310 (41%), Gaps = 54/310 (17%)
Query: 18 SGQVVVDVGHRIELHC--RVSPKRLSSAKAWLKDGLVLRRNSDEV-------LVLDRVQR 68
+G+V V GH +L C R P S A W KDG +L +S+ V L L + Q
Sbjct: 1544 TGEVTVLEGHTAQLLCEARGMP---SPAITWYKDGTLLAPSSEVVYSKGGRQLQLVKAQP 1600
Query: 69 EDAGMYQCHVSADDDSAQMSAQV-ILGGELVEIASSNQVVVDV--GHRIELHCRVSPKRL 125
DAG+Y C S + S + + +E A +V G + L C V+
Sbjct: 1601 SDAGLYTCQASNPAGITKKSTSLEVYVPPTIEGADGGPYLVQAVAGRPVALEC-VARGHP 1659
Query: 126 SSAKAWLKDGL-VLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDES 184
+W +GL V+ N + +Q E+ G +SG L
Sbjct: 1660 PPTISWQHEGLPVVDSNGTWLEAGGALQLENPGE-------------ASGGL-------- 1698
Query: 185 DRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPC 244
Y C + G ++L + + + +LL A M + + +S+ LPC
Sbjct: 1699 -----YSCVASSP-AGEAVLQYS---VEMQVPPQLLVAEGMGQ----VTATVGQSLDLPC 1745
Query: 245 SAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSGVWNCVANNSEGQDKM 302
A G+P+PTI+W + P EE +Q G+ L ISHVE + SG++ C A N G
Sbjct: 1746 QASGSPVPTIQWLQNGRPAEELAGVQLASQGTILHISHVELNHSGLFACQATNEAGTAGA 1805
Query: 303 QLFIQYAHGK 312
++ + HGK
Sbjct: 1806 EVEVS-VHGK 1814
Score = 69.3 bits (168), Expect = 4e-11, Method: Composition-based stats.
Identities = 95/414 (22%), Positives = 153/414 (36%), Gaps = 96/414 (23%)
Query: 21 VVVDVGHRIELHC--RVSPKRLSSAKAWLKDGLVLRRNSDEV---LVLDRVQREDAGMYQ 75
V+ G + L C R SP L S W+KDG L S E L L+ V DAG Y
Sbjct: 3450 VMAAQGSEVVLPCEARGSPLPLVS---WMKDGEPLLPQSLEQGPGLKLESVSVGDAGTYS 3506
Query: 76 CHVSADDDSAQMSAQ--VILGGELVEIASSNQVVVDVGHRIELHCR---VSPKRLSSAKA 130
C +++ A+ Q V+ + E ++++ + G +EL C + P ++
Sbjct: 3507 CTAASEAGEARRHFQLTVMDPPHIEESGETSELSLTPGAHLELLCEARGIPPPNIT---- 3562
Query: 131 WLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHM-------------------- 170
W KDG LRR ++ ++ ++AG+Y C E +
Sbjct: 3563 WHKDGQALRRTENDSQAGRVLRVDNAGLYTCLAESPAGEVEKSFRVRVQAPPNVVGPRGP 3622
Query: 171 -----LSSGELIIH--------------------QVD------ESDRYRSYQCRGVNKLT 199
L+ G+LI+ Q D E R+ Q
Sbjct: 3623 RSVVGLAPGQLILECSVEAEPAPEIEWHRGGVLLQADAHTHFPEQGRFLKLQALSTADGG 3682
Query: 200 GASLLSVNR-GRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYK 258
S + NR G S+ + +A + +NV + + +LPC G P P + W K
Sbjct: 3683 DYSCTARNRAGSTSVAFRVEIHTAPTIQSGPNTVNVSVNRTTLLPCQTHGVPTPLVSWRK 3742
Query: 259 QDSPVEE-SDRIQRIGS-SLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHML 316
P+ S R++ + SL I V D+G + C+A+NS G D+ L
Sbjct: 3743 DGIPLHPGSPRLEFLPEGSLRIHPVLAQDAGHYLCLASNSAGSDRKGL------------ 3790
Query: 317 SSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+ R+ + L + LPC A+G+P P + +
Sbjct: 3791 -------------DLRVFEPPAIAPGPSNLTLTAYSPASLPCEARGSPKPLVTW 3831
Score = 68.6 bits (166), Expect = 7e-11, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 38/235 (16%)
Query: 66 VQREDAGMYQCHVSADDDSAQMSAQV-ILGGELVEIASSNQVVVDVGHRIELHCRVSPKR 124
V RED+G Y C Q + V + +++ + + +V VG I+LHC V
Sbjct: 4221 VTREDSGTYTCWAENRVGRVQAVSFVHVKEAPVLQGEAFSYLVEPVGGSIQLHCVVRGDP 4280
Query: 125 LSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDES 184
W KDGL L + + H + L +G L I +
Sbjct: 4281 APDIH-WTKDGLPLP------------------ISRLHFQ------LQNGSLTILRTKMD 4315
Query: 185 DRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPC 244
D R YQC VN++ G + L SA + + + V+ V L C
Sbjct: 4316 DAGR-YQCLAVNEM----------GTVKKVVTVVLQSAPVFQVEPQDVTVRSGVDVELRC 4364
Query: 245 SAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNCVANNSEG 298
A G P+PTI+W + P++ +++ + SL + HVE D+GV+ CVA+N G
Sbjct: 4365 RATGEPVPTIEWLRAGRPLQAGRKLRALPDGSLWLEHVEAGDAGVYECVAHNHLG 4419
Score = 65.9 bits (159), Expect = 4e-10, Method: Composition-based stats.
Identities = 89/370 (24%), Positives = 139/370 (37%), Gaps = 95/370 (25%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDGL--------VLRRNSDEVLVLDRVQREDAGMYQC- 76
G + L C+ S + W KDG +L + +VL + D G YQC
Sbjct: 1458 GADVTLECQTSGVPTPQVE-WTKDGQPILPGDPHILLQEDGQVLRIISSHLGDEGQYQCV 1516
Query: 77 ------HVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHC--RVSPKRLSSA 128
+ D + S I G + +V V GH +L C R P S A
Sbjct: 1517 AFSPAGQQAKDFQLSIHSPPTIWGSN-----ETGEVTVLEGHTAQLLCEARGMP---SPA 1568
Query: 129 KAWLKDGLVLRRNSDEV-------LVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQV 181
W KDG +L +S+ V L L + Q DAG+Y C S+ I +
Sbjct: 1569 ITWYKDGTLLAPSSEVVYSKGGRQLQLVKAQPSDAGLYTCQA--------SNPAGITKKS 1620
Query: 182 DESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVI 241
+ Y G + G L+ GR V
Sbjct: 1621 TSLEVYVPPTIEGADG--GPYLVQAVAGR----------------------------PVA 1650
Query: 242 LPCSAQGNPLPTIKWYKQDSPVEESDRIQ-RIGSSLSISHVEESDSGVWNCVANNSEGQD 300
L C A+G+P PTI W + PV +S+ G +L + + E+ G+++CVA++ G+
Sbjct: 1651 LECVARGHPPPTISWQHEGLPVVDSNGTWLEAGGALQLENPGEASGGLYSCVASSPAGEA 1710
Query: 301 KMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSA 360
+Q ++ + +LL A M + + +S+ LPC A
Sbjct: 1711 VLQYSVEM-------------------QVPPQLLVAEGMGQ----VTATVGQSLDLPCQA 1747
Query: 361 QGNPLPTIKY 370
G+P+PTI++
Sbjct: 1748 SGSPVPTIQW 1757
Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats.
Identities = 82/390 (21%), Positives = 143/390 (36%), Gaps = 97/390 (24%)
Query: 10 SLSIEMSP------SGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV- 62
+L +++ P + Q+ + + L C V + W KDG L + L+
Sbjct: 2964 TLKVQVPPQISDWTTSQLTATLNSSVSLPCEVYAHP-NPEVTWYKDGQPLSLGQEAFLLP 3022
Query: 63 ------LDRVQREDAGMYQCHV--SADDDSAQMSAQVILGGELVEIASSNQVVVDV--GH 112
L R Q D+G Y C +A D + V++ + Q + V G
Sbjct: 3023 GTHTLRLARAQPADSGTYLCEALNAAGRDQKMVQLNVLVPPSFKQAPGGPQEAIQVRAGD 3082
Query: 113 RIELHCRVSPKRLSSAKAWLKDGLVLR--------RNSDEVLVLDRVQREDAGMYQCHIE 164
+ L C + A W KD L + + +LD Q D G+Y C +
Sbjct: 3083 KAILSCE-TDSLPEPAVTWFKDQQPLALGQRIQGLQGGQTLEILDS-QASDKGVYSCKVS 3140
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+ ++GE I R++ +L++
Sbjct: 3141 N------TAGEAI----------RTF------------VLAIQ--------------VPP 3158
Query: 225 MFEK--HRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEES--DRIQRIGSSLSISH 280
FEK +N +++L C G P PT+ W K PVE S + G L +SH
Sbjct: 3159 TFEKPERETVNQVAGRTLVLACDVSGIPAPTVTWLKDRLPVESSVVHGVVSRGGRLQLSH 3218
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
++ + +G + CVA N++ + + + L+ Q+ + + M
Sbjct: 3219 LQPAQAGTYTCVAENAQAEARKDFVVSV------------LVPPQIQD--------SGMA 3258
Query: 341 EKHRILNVKKDESVILPCSAQGNPLPTIKY 370
++H NV + + + L C A+G P P I +
Sbjct: 3259 QEH---NVLEKQEIRLHCEAEGQPPPDITW 3285
Score = 60.1 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 54/213 (25%)
Query: 167 KYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMF 226
+Y +L SG L + Q D Y C N S V R ++ ++
Sbjct: 1116 RYELLPSGSLRLAQAQVGDN-GLYGCTASNPAGATSRRYVLRVQVP----------PQVQ 1164
Query: 227 EKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS----SLSISHVE 282
R+L V E++ L C A+GNP P + W+K D + +G S+ + V+
Sbjct: 1165 PGPRVLKVLAGEALDLNCVAEGNPQPQLNWFK--------DGMALMGEGAQGSVHFAAVK 1216
Query: 283 ESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELII----HQVDEKNKRLLSAAK 338
SD+G++ C A+NS G D +L EL++ H ++ K LL
Sbjct: 1217 TSDAGLYRCEASNSAGTDTWKL---------------ELLVLEPPHWGTDETKSLLERVA 1261
Query: 339 MFEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
E+ LPC AQG P P I +R
Sbjct: 1262 ------------GENASLPCPAQGTPKPRITWR 1282
Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats.
Identities = 82/324 (25%), Positives = 128/324 (39%), Gaps = 70/324 (21%)
Query: 5 IQVKSSLSIEMSPSGQVV-VDVGHRIELHCRVS---PKRLSSAKAWLKDGLVLRRNS--- 57
++V SIE +V+ V G +L C + P +++ W KDG L
Sbjct: 2472 VEVLVPPSIENEDLEEVIKVPEGQTAQLECNATGHPPPKVT----WFKDGQSLTVEDPYE 2527
Query: 58 ----DEVLVLDRVQREDAGMYQC----HVSADDDSAQMSAQV---ILGGELVEIASSNQV 106
L + + +AG Y C V Q+S V ILG + E ++ +V
Sbjct: 2528 MSPDGAFLWIPQANLSNAGHYSCIASNAVGEKTKHTQLSVLVVPTILG--VPEKNANEEV 2585
Query: 107 VVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV-------LDRVQREDAGMY 159
V + + I L C + S W+KDG + + L+ + Q+EDAG Y
Sbjct: 2586 TVTINNPISLICE-ALAFPSPNITWMKDGSPFEASKNIQLLPGTHGLQILNAQKEDAGQY 2644
Query: 160 QCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNR-GRLSLTENKR 218
C ++ +++ E+ + +Y V L S+ + G +S+ E K
Sbjct: 2645 TC--------------VVTNELGEATK--NYH---VEVLIPPSISKDDPLGEVSVKEVK- 2684
Query: 219 LLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS--L 276
K + S+ L C P P+I WYK PV S R+ +G L
Sbjct: 2685 ---------------TKVNSSLTLECECWATPPPSISWYKDGRPVTPSHRLSVLGEGRLL 2729
Query: 277 SISHVEESDSGVWNCVANNSEGQD 300
I + SDSG + CVA N G+D
Sbjct: 2730 QIQPTQVSDSGRYLCVATNVAGED 2753
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 93/401 (23%), Positives = 149/401 (37%), Gaps = 111/401 (27%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDV-GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVL 61
L IQV + P + V V G + L C VS + WLKD L + + +
Sbjct: 3152 LAIQVPPTFE---KPERETVNQVAGRTLVLACDVSGIPAPTV-TWLKDRLPVESSVVHGV 3207
Query: 62 V-------LDRVQREDAGMYQCHVSADDDSAQMSAQ------VILGGELVEIASSNQVVV 108
V L +Q AG Y C ++AQ A+ V++ ++ + + + V
Sbjct: 3208 VSRGGRLQLSHLQPAQAGTYTCVA----ENAQAEARKDFVVSVLVPPQIQDSGMAQEHNV 3263
Query: 109 DVGHRIELHCRVS---PKRLSSAKAWLKDGLVLRRN---------SDEVLVLDRVQREDA 156
I LHC P ++ WLKDG +L ++ LVL ++ D+
Sbjct: 3264 LEKQEIRLHCEAEGQPPPDIT----WLKDGGLLDQHVGPHLRFYLDGSTLVLKGLRTADS 3319
Query: 157 GMYQCHI-----EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRL 211
G Y C ED + H VN L ++ +
Sbjct: 3320 GAYTCVAHNPAGEDARLHT------------------------VNVLVPPTI------KQ 3349
Query: 212 SLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDR--I 269
+ L+S + E V + C QG+P + W K P+ S R +
Sbjct: 3350 QAGDTGTLVS-------------RTGELVTMVCPVQGSPPIHVSWLKDGLPLPLSQRTLL 3396
Query: 270 QRIGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEK 329
G +L IS V+ +DSGV+ CVA + G A + +L I+ V+ +
Sbjct: 3397 HSSGRTLRISQVQLADSGVFTCVAASPAG---------VADRNFTLLVLVPPILEPVEFQ 3447
Query: 330 NKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
N + + + V+LPC A+G+PLP + +
Sbjct: 3448 NNVMAA--------------QGSEVVLPCEARGSPLPLVSW 3474
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 98/435 (22%), Positives = 156/435 (35%), Gaps = 102/435 (23%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRVS---PKRLSSAKAWLKDGL-------VLR 54
+ V ++ + +G +V G + + C V P +S WLKDGL L
Sbjct: 3341 VLVPPTIKQQAGDTGTLVSRTGELVTMVCPVQGSPPIHVS----WLKDGLPLPLSQRTLL 3396
Query: 55 RNSDEVLVLDRVQREDAGMYQCHVSADDDSA--QMSAQVILGGELVEIASSNQVVVDVGH 112
+S L + +VQ D+G++ C ++ A + V++ L + N V+ G
Sbjct: 3397 HSSGRTLRISQVQLADSGVFTCVAASPAGVADRNFTLLVLVPPILEPVEFQNNVMAAQGS 3456
Query: 113 RIELHC--RVSPKRLSSAKAWLKDGLVLRRNSDEV---LVLDRVQREDAGMYQCHIEDGK 167
+ L C R SP L S W+KDG L S E L L+ V DAG Y C
Sbjct: 3457 EVVLPCEARGSPLPLVS---WMKDGEPLLPQSLEQGPGLKLESVSVGDAGTYSCTAASEA 3513
Query: 168 YHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGA--SLLSVNRG-------------RLS 212
+L + +D S + ++ GA LL RG L
Sbjct: 3514 GEARRHFQLTV--MDPPHIEESGETSELSLTPGAHLELLCEARGIPPPNITWHKDGQALR 3571
Query: 213 LTENK----RLL-------------SAAKMFEKHRILNVKKDESVILP------------ 243
TEN R+L S A EK + V+ +V+ P
Sbjct: 3572 RTENDSQAGRVLRVDNAGLYTCLAESPAGEVEKSFRVRVQAPPNVVGPRGPRSVVGLAPG 3631
Query: 244 -----CSAQGNPLPTIKWYKQDSPVEESDRIQ--RIGSSLSISHVEESDSGVWNCVANNS 296
CS + P P I+W++ ++ G L + + +D G ++C A N
Sbjct: 3632 QLILECSVEAEPAPEIEWHRGGVLLQADAHTHFPEQGRFLKLQALSTADGGDYSCTARNR 3691
Query: 297 EGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVIL 356
G + ++ IH +A + +NV + + +L
Sbjct: 3692 AGSTSVAFRVE---------------IH----------TAPTIQSGPNTVNVSVNRTTLL 3726
Query: 357 PCSAQGNPLPTIKYR 371
PC G P P + +R
Sbjct: 3727 PCQTHGVPTPLVSWR 3741
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 75/349 (21%), Positives = 132/349 (37%), Gaps = 87/349 (24%)
Query: 45 AWLKDGLVLRRNSD---------EVLVLDRVQREDAGMYQCHVS--ADDDSAQMSAQVIL 93
+W KDG L D +L L + Q G Y C S A S + S +V++
Sbjct: 2229 SWRKDGQPLPGEGDSLEQVLAVGRLLYLGQAQSAQEGTYTCECSNAAGTSSQEQSLEVLV 2288
Query: 94 GGE---LVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLR-------RNSD 143
+ L E ++ V+ D L C + K L W +DG + +N +
Sbjct: 2289 PPQVTGLWEPLTTVSVIQD--GNTTLACNATGKPLPVV-TWQRDGQPVSVEPGLRLQNQN 2345
Query: 144 EVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASL 203
L ++R Q AG Y C E+ ++G ++R + LTG S
Sbjct: 2346 HSLHVERAQASHAGGYSCVAEN------TAGR--------AERRFALSVLAPPHLTGDSD 2391
Query: 204 LSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV 263
SLT L S L C A G P PT++W+++ P+
Sbjct: 2392 --------SLTNVTATLHG----------------SFTLLCEAAGVPAPTVQWFQEGQPI 2427
Query: 264 --EESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGEL 321
E + G L ++ +E D G+++C+A+N G+ + ++ L
Sbjct: 2428 SPREGTYLLAGGWMLKMTQAQEQDRGLYSCLASNEAGEARRNFSVEV------------L 2475
Query: 322 IIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+ ++ + + ++ V + ++ L C+A G+P P + +
Sbjct: 2476 VPPSIENE-----------DLEEVIKVPEGQTAQLECNATGHPPPKVTW 2513
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 89/399 (22%), Positives = 150/399 (37%), Gaps = 106/399 (26%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNS----- 57
L + V +++ + G V++ R+ + +P+ WLKDG +
Sbjct: 2005 LRVNVPPRITLPPNLPGPVLLGTPFRLTCNATGTPR---PTLIWLKDGNPVSPEGIPGLK 2061
Query: 58 ----DEVLVLDRVQREDAGMYQC-HVSA-DDDSAQMSAQV-----ILGGELVEIASSNQV 106
+VL + + D+G Y C VSA +D + QV ILG EL N
Sbjct: 2062 VFPGGQVLTVASARASDSGSYSCVAVSAVGEDRRDVILQVHMPPSILGEEL------NMS 2115
Query: 107 VVDVGHRIELHCR---VSPKRLSSAKAWLKDGLVL------RRNSDEVLV-LDRVQREDA 156
VV V + L C+ V P L W KDG L R ++D+ L+ +DR DA
Sbjct: 2116 VV-VNESVTLECQSHAVPPPVLR----WQKDGRPLEPHPGIRLSADKALLEVDRAAVWDA 2170
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
G Y C I+Q S+++ +
Sbjct: 2171 GHYTCEA--------------INQAGRSEKHFNLHV------------------------ 2192
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVE-ESDRIQR---I 272
+ A ++ L V + ++ L C QG P P I W K P+ E D +++ +
Sbjct: 2193 --WVPPAFPSKEPYTLTVTEGQTARLSCDCQGIPFPKISWRKDGQPLPGEGDSLEQVLAV 2250
Query: 273 GSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKR 332
G L + + + G + C +N+ G + ++ L+ QV
Sbjct: 2251 GRLLYLGQAQSAQEGTYTCECSNAAGTSSQEQSLEV------------LVPPQV------ 2292
Query: 333 LLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
++E ++V +D + L C+A G PLP + ++
Sbjct: 2293 ----TGLWEPLTTVSVIQDGNTTLACNATGKPLPVVTWQ 2327
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 86/361 (23%), Positives = 128/361 (35%), Gaps = 73/361 (20%)
Query: 21 VVVDVGHRIELHCRVS---PKRLSSAKAWLKDGL-VLRRNSDE---VLVLDRVQREDAGM 73
V+ VG L C S P R+ W + GL V+ D L + Q DAG+
Sbjct: 708 VLTAVGEEAVLLCAASGVPPPRV----IWYRGGLEVILAPGDSRSGTLRIPEAQERDAGL 763
Query: 74 YQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLK 133
Y C + A Q+++G V V++G + L CR + R W
Sbjct: 764 YTCKAVNELGDASAEIQLVVGNAPRLTDPPQDVTVELGKSVFLTCRAT-GRPPPIVTW-- 820
Query: 134 DGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCR 193
RR + L R R SG L+ +V D+ Y C
Sbjct: 821 -----RRGDGQALEPGRGSRTG--------------QRDSGVLVFERVSLEDQ-APYVCE 860
Query: 194 GVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSA-QGNPLP 252
N A RL +T + + ++ ++ V + + V L C G PLP
Sbjct: 861 ARNVFGKAQA----EARLVVTGH----APPQIANSASVVRVLEGQPVSLTCVILAGRPLP 912
Query: 253 TIKWYKQDSPVEESDR-IQRIGSSLSISHVEESDSGVWNCVANNSEGQD--KMQLFIQYA 309
+W K SP+ +R R SL + + D+G ++CVA N G ++L +Q
Sbjct: 913 ERRWLKAGSPLPPGNRHAVRADGSLHLDRALQEDAGRYSCVATNVAGSQHRDVELVVQVP 972
Query: 310 HGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIK 369
+ H S+ H + N S LPC A G P P I
Sbjct: 973 -PRIHPTST------------------------HHVTNEGVPAS--LPCIASGVPTPKIT 1005
Query: 370 Y 370
+
Sbjct: 1006 W 1006
Score = 55.1 bits (131), Expect = 9e-07, Method: Composition-based stats.
Identities = 81/369 (21%), Positives = 145/369 (39%), Gaps = 78/369 (21%)
Query: 14 EMSPSGQVVVDVGHRIELHCRV---SPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRE- 69
++ P V V G L C+V +P L+ W++D L + + L + E
Sbjct: 520 QLVPGPNVTVSPGETAILSCQVLGETPYNLT----WVRDWRALPATTGRISQLSDLSLEV 575
Query: 70 ------DAGMYQCHVSADDDSAQMSAQVILGGELVEIA-SSNQVVVDVGHRIELHCRVSP 122
D G YQC V+++ + + +L E +++ ++ G + + C S
Sbjct: 576 RSIIPTDGGQYQC-VASNPNGVTRATTWLLVREAPQVSINARSQRFSQGVEVRVSCSASG 634
Query: 123 KRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVD 182
+ +W ++GL L ED + H+ + G LII +
Sbjct: 635 YP-TPHISWSREGLALP------------------------EDSRIHVDAQGTLIIQGLA 669
Query: 183 ESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVIL 242
D +Y C+ N++ G +V L T+ + + + +L +E+V+L
Sbjct: 670 PEDA-GNYSCQATNEV-GTDEETVT---LYYTDPPSVSAVNAV-----VLTAVGEEAVLL 719
Query: 243 PCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKM 302
C+A G P P + WY+ V + R G+ L I +E D+G++ C A N G
Sbjct: 720 -CAASGVPPPRVIWYRGGLEVILAPGDSRSGT-LRIPEAQERDAGLYTCKAVNELGDASA 777
Query: 303 QLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQG 362
+ IQ G +A ++ + + + V+ +SV L C A G
Sbjct: 778 E--IQLVVG-----------------------NAPRLTDPPQDVTVELGKSVFLTCRATG 812
Query: 363 NPLPTIKYR 371
P P + +R
Sbjct: 813 RPPPIVTWR 821
Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 35/206 (16%)
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+GK+ + SGEL++ + D +Y C N + A R R+ LT +L+
Sbjct: 4116 EGKFTLQPSGELLVKNSEGQDA-GTYICTAENAVGRA------RRRVHLT----ILTLPV 4164
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEES 284
+ +++ + + L C A+G+P P I W D PV E Q GS+L + V
Sbjct: 4165 LTTLPGDRSLRLGDRLWLRCVARGSPTPRIGWTINDQPVTEGVSEQDGGSTLQRAAVTRE 4224
Query: 285 DSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHR 344
DSG + C A N G+ + + + H K + GE + V+
Sbjct: 4225 DSGTYTCWAENRVGRVQA---VSFVHVKEAPVLQGEAFSYLVEPVGG------------- 4268
Query: 345 ILNVKKDESVILPCSAQGNPLPTIKY 370
S+ L C +G+P P I +
Sbjct: 4269 --------SIQLHCVVRGDPAPDIHW 4286
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 30/143 (20%)
Query: 231 ILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-SLSISHVEESDSGVW 289
++ V E V+LPC A G P P + W K+ + E +Q + S L I H D+G +
Sbjct: 3990 VVQVVASEEVLLPCEASGIPQPMVIWQKEGLSIPEGAHMQVLPSGQLRIMHASPEDAGNY 4049
Query: 290 NCVANNSEGQ--DKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILN 347
C+A NS G K +L +Q + V E LS
Sbjct: 4050 FCIAQNSVGSAMAKTRLVVQ---------------VPPVIENGLPDLSTI---------- 4084
Query: 348 VKKDESVILPCSAQGNPLPTIKY 370
+ +LPC+A+G+P P I +
Sbjct: 4085 --EGSHALLPCTAKGSPEPAITW 4105
Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 4 FIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRN------S 57
F+ VK + ++ +V VG I+LHC V W KDGL L +
Sbjct: 4245 FVHVKEAPVLQGEAFSYLVEPVGGSIQLHCVVRGDPAPDIH-WTKDGLPLPISRLHFQLQ 4303
Query: 58 DEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELH 117
+ L + R + +DAG YQC + + + V+L V V V G +EL
Sbjct: 4304 NGSLTILRTKMDDAGRYQCLAVNEMGTVKKVVTVVLQSAPVFQVEPQDVTVRSGVDVELR 4363
Query: 118 CRVSPKRLSSAKAWLK------DGLVLRRNSDEVLVLDRVQREDAGMYQC 161
CR + + + + + WL+ G LR D L L+ V+ DAG+Y+C
Sbjct: 4364 CRATGEPVPTIE-WLRAGRPLQAGRKLRALPDGSLWLEHVEAGDAGVYEC 4412
Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats.
Identities = 79/318 (24%), Positives = 124/318 (38%), Gaps = 66/318 (20%)
Query: 2 QLFIQVKSSLSIEMSPSG------QVVVDVGHRIELHCRV--SPKRLSSAKAWLKDG--L 51
++++ V + I+M+ S +V V G + L C SP L + W KD L
Sbjct: 1054 EMWLSVNTKPMIKMNGSQAVDVPLRVTVKAGEEVTLDCEAQGSPTPLLT---WTKDANPL 1110
Query: 52 VLRRNSDEVLV-----LDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQV 106
+ N E+L L + Q D G+Y C +A + + S + +L ++
Sbjct: 1111 LPVTNRYELLPSGSLRLAQAQVGDNGLYGC--TASNPAGATSRRYVLRVQVPPQVQPGPR 1168
Query: 107 VVDV--GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV-LDRVQREDAGMYQCHI 163
V+ V G ++L+C V+ W KDG+ L + V V+ DAG+Y+C
Sbjct: 1169 VLKVLAGEALDLNC-VAEGNPQPQLNWFKDGMALMGEGAQGSVHFAAVKTSDAGLYRCEA 1227
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
+ S+G +D ++ LL + E K LL
Sbjct: 1228 SN------SAG---------TDTWK------------LELLVLEPPHWGTDETKSLLERV 1260
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDS--PVEESDRIQRIGS-SLSISH 280
E+ LPC AQG P P I W + S P+ + + SL +S
Sbjct: 1261 A------------GENASLPCPAQGTPKPRITWRRGPSSEPLNGRPDVAVLDEGSLFLSS 1308
Query: 281 VEESDSGVWNCVANNSEG 298
V +DSG + C A N G
Sbjct: 1309 VSLADSGEYECQATNEVG 1326
Score = 52.4 bits (124), Expect = 6e-06, Method: Composition-based stats.
Identities = 68/302 (22%), Positives = 117/302 (38%), Gaps = 57/302 (18%)
Query: 19 GQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGL-------VLRRNSDEVLVLDRVQREDA 71
GQV VG ++L C+ S + + + WL++G V + +L + V+ +
Sbjct: 1731 GQVTATVGQSLDLPCQASGSPVPTIQ-WLQNGRPAEELAGVQLASQGTILHISHVELNHS 1789
Query: 72 GMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELH-----------CRV 120
G++ C + + +A +V + G+ QV V++G H
Sbjct: 1790 GLFACQATNEAGTAGAEVEVSVHGK--------QVSVNLGASFSAHHWWGEPHSPFPATC 1841
Query: 121 SPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQ 180
+P A+ K LV R ++ + +G + G ++ Q
Sbjct: 1842 NPPVCRHWSAYPKPSLVERWRGR-----GNLRGQPSGTVR-----------EPGLTLLSQ 1885
Query: 181 VDESDRYRS--YQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDE 238
++++D Y C N L G S V ++ + N K+ V ++
Sbjct: 1886 IEKADLRDEGVYTCSATN-LAGESKKDVTL-KVLVPPNIEPGPVNKV--------VLENA 1935
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESDR--IQRIGSSLSISHVEESDSGVWNCVANNS 296
SV L C A G P P + W+K P+ R + G L I V+ SD+G + CVA N
Sbjct: 1936 SVTLECLASGVPPPDVSWFKGRQPISTQRRVIVSADGRVLHIERVQLSDAGSYRCVATNV 1995
Query: 297 EG 298
G
Sbjct: 1996 AG 1997
Score = 52.4 bits (124), Expect = 6e-06, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 124/313 (39%), Gaps = 64/313 (20%)
Query: 11 LSIEMSPS--GQ---VVVDVGHRIELHCR---VSPKRLSSAKAWLKDGLVL------RRN 56
L + M PS G+ + V V + L C+ V P L W KDG L R +
Sbjct: 2099 LQVHMPPSILGEELNMSVVVNESVTLECQSHAVPPPVLR----WQKDGRPLEPHPGIRLS 2154
Query: 57 SDEVLV-LDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQ---VVVDVGH 112
+D+ L+ +DR DAG Y C A + + + L + S + + V G
Sbjct: 2155 ADKALLEVDRAAVWDAGHYTCE--AINQAGRSEKHFNLHVWVPPAFPSKEPYTLTVTEGQ 2212
Query: 113 RIELHCRVS----PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKY 168
L C PK +W KDG L D L++V
Sbjct: 2213 TARLSCDCQGIPFPK-----ISWRKDGQPLPGEGDS---LEQV----------------- 2247
Query: 169 HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEK 228
L+ G L+ +S + +Y C N A+ S L + ++ ++E
Sbjct: 2248 --LAVGRLLYLGQAQSAQEGTYTCECSN----AAGTSSQEQSLEVLVPPQVTG---LWEP 2298
Query: 229 HRILNVKKDESVILPCSAQGNPLPTIKWYKQDSP--VEESDRIQRIGSSLSISHVEESDS 286
++V +D + L C+A G PLP + W + P VE R+Q SL + + S +
Sbjct: 2299 LTTVSVIQDGNTTLACNATGKPLPVVTWQRDGQPVSVEPGLRLQNQNHSLHVERAQASHA 2358
Query: 287 GVWNCVANNSEGQ 299
G ++CVA N+ G+
Sbjct: 2359 GGYSCVAENTAGR 2371
Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSGVW 289
+ V +V L C A GNP P + W++ PV S R+Q + G L ++ E +D+ +
Sbjct: 2889 VTVNASSAVSLECPALGNPAPAVSWFQNGLPVSPSPRLQVLEEGQVLKVATAEVADAASY 2948
Query: 290 NCVANNSEG 298
CVA N G
Sbjct: 2949 MCVAENQAG 2957
Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 115/316 (36%), Gaps = 72/316 (22%)
Query: 63 LDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRV-- 120
+ R + + G YQC + S + SAQ+++ ++ V V G L C+V
Sbjct: 484 IPRASKAEEGTYQCIAVSRAGSGRASAQIVITDPPPQLVPGPNVTVSPGETAILSCQVLG 543
Query: 121 -SPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIH 179
+P L+ W++D L + G+ LS L +
Sbjct: 544 ETPYNLT----WVRDWRALPATT-----------------------GRISQLSDLSLEVR 576
Query: 180 QVDESDRYRSYQCRGVNK--LTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKD 237
+ +D + YQC N +T A+ + R ++ N R ++ E
Sbjct: 577 SIIPTDGGQ-YQCVASNPNGVTRATTWLLVREAPQVSINARSQRFSQGVE---------- 625
Query: 238 ESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ-RIGSSLSISHVEESDSGVWNCVANNS 296
V + CSA G P P I W ++ + E RI +L I + D+G ++C A N
Sbjct: 626 --VRVSCSASGYPTPHISWSREGLALPEDSRIHVDAQGTLIIQGLAPEDAGNYSCQATNE 683
Query: 297 EGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVIL 356
G D+ + + Y V N +L+A E +L
Sbjct: 684 VGTDEETVTLYYTDPP------------SVSAVNAVVLTAV-------------GEEAVL 718
Query: 357 PCSAQGNPLP-TIKYR 371
C+A G P P I YR
Sbjct: 719 LCAASGVPPPRVIWYR 734
Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats.
Identities = 89/380 (23%), Positives = 140/380 (36%), Gaps = 77/380 (20%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRVS--PKRLSSAKAWLKDGLVLRRNSDEV-- 60
+++ ++ +I+ P+ V V V L C+ P L S W KDG+ L S +
Sbjct: 3701 VEIHTAPTIQSGPN-TVNVSVNRTTLLPCQTHGVPTPLVS---WRKDGIPLHPGSPRLEF 3756
Query: 61 -----LVLDRVQREDAGMYQCHVS--ADDDSAQMSAQVILGGELVEIASSNQVVVDVGHR 113
L + V +DAG Y C S A D + +V + S+ +
Sbjct: 3757 LPEGSLRIHPVLAQDAGHYLCLASNSAGSDRKGLDLRVFEPPAIAPGPSNLTLTAYSPAS 3816
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSS 173
+ R SPK L + W KDG Q+ D + Q G Y +L S
Sbjct: 3817 LPCEARGSPKPLVT---WWKDG----------------QKLDLRLQQ-----GAYRLLPS 3852
Query: 174 GELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILN 233
L + D + ++C N++ G S R R +T + + +
Sbjct: 3853 NALFLTAPSPQDSAQ-FECVVSNEV-GES-----RRRYQVTVH----VPPTIADDQTHFT 3901
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSGVWNC 291
V + VIL C + G+P P + W K + + RI +L I +G + C
Sbjct: 3902 VTRMAPVILTCHSTGSPTPAVSWSKAGTQLGARGSGYRILPSGALEIERALPLHAGRYTC 3961
Query: 292 VANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKD 351
A NS G + HM ++ Q K L S ++ V
Sbjct: 3962 TARNSAGV-----------ARKHM-----VLTVQASPVVKPLPS---------VVQVVAS 3996
Query: 352 ESVILPCSAQGNPLPTIKYR 371
E V+LPC A G P P + ++
Sbjct: 3997 EEVLLPCEASGIPQPMVIWQ 4016
Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats.
Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 60/319 (18%)
Query: 60 VLVLDRVQREDAGMYQCHVSADDDSAQMSAQV-ILGGELVEIASSNQVV-VDVGHRIELH 117
+L + + Q +D G+Y C S + A+ + V +L +E +V+ V G +L
Sbjct: 2441 MLKMTQAQEQDRGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVPEGQTAQLE 2500
Query: 118 CRVS---PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSG 174
C + P +++ W KDG L +ED Y M G
Sbjct: 2501 CNATGHPPPKVT----WFKDGQSLT-----------------------VED-PYEMSPDG 2532
Query: 175 ELI-IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILN 233
+ I Q + S+ Y C N + + +LS+ +L + +
Sbjct: 2533 AFLWIPQANLSNA-GHYSCIASNAVGEKT----KHTQLSVLVVPTILGVPEKNANEEV-T 2586
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS--LSISHVEESDSGVWNC 291
V + + L C A P P I W K SP E S IQ + + L I + ++ D+G + C
Sbjct: 2587 VTINNPISLICEALAFPSPNITWMKDGSPFEASKNIQLLPGTHGLQILNAQKEDAGQYTC 2646
Query: 292 VANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKD 351
V N G+ A YH+ E++I K+ L + + + K +
Sbjct: 2647 VVTNELGE---------ATKNYHV----EVLIPPSISKDDPLGEVSV-----KEVKTKVN 2688
Query: 352 ESVILPCSAQGNPLPTIKY 370
S+ L C P P+I +
Sbjct: 2689 SSLTLECECWATPPPSISW 2707
Score = 48.9 bits (115), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 102/272 (37%), Gaps = 54/272 (19%)
Query: 45 AWLKDGLVLRRNS------DEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELV 98
+W ++GL L +S L++ + EDAG Y C + + + + + +
Sbjct: 641 SWSREGLALPEDSRIHVDAQGTLIIQGLAPEDAGNYSCQATNEVGTDEETVTLYYTDPPS 700
Query: 99 EIASSNQVVVDVGHRIELHCRVS---PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRED 155
A + V+ VG L C S P R+ W + GL EV++ R
Sbjct: 701 VSAVNAVVLTAVGEEAVLLCAASGVPPPRV----IWYRGGL-------EVILAPGDSR-- 747
Query: 156 AGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTE 215
SG L I + E D Y C+ VN+L AS + L
Sbjct: 748 -----------------SGTLRIPEAQERDA-GLYTCKAVNELGDAS------AEIQLV- 782
Query: 216 NKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS 275
+ +A ++ + + + V+ +SV L C A G P P + W + D E R R G
Sbjct: 783 ---VGNAPRLTDPPQDVTVELGKSVFLTCRATGRPPPIVTWRRGDGQALEPGRGSRTGQR 839
Query: 276 ----LSISHVEESDSGVWNCVANNSEGQDKMQ 303
L V D + C A N G+ + +
Sbjct: 840 DSGVLVFERVSLEDQAPYVCEARNVFGKAQAE 871
Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 82/383 (21%), Positives = 143/383 (37%), Gaps = 73/383 (19%)
Query: 14 EMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV-------LDRV 66
E + + +V V + + I L C + S W+KDG + + L+ +
Sbjct: 2578 EKNANEEVTVTINNPISLICE-ALAFPSPNITWMKDGSPFEASKNIQLLPGTHGLQILNA 2636
Query: 67 QREDAGMYQCHVSADDDSAQMSAQV-------ILGGELVEIASSNQVVVDVGHRIELHCR 119
Q+EDAG Y C V+ + A + V I + + S +V V + L C
Sbjct: 2637 QKEDAGQYTCVVTNELGEATKNYHVEVLIPPSISKDDPLGEVSVKEVKTKVNSSLTLECE 2696
Query: 120 ---VSPKRLSSAKAWLKDGLVLRRN-------SDEVLVLDRVQREDAGMYQCHIEDGKYH 169
P +S W KDG + + +L + Q D+G Y C +
Sbjct: 2697 CWATPPPSIS----WYKDGRPVTPSHRLSVLGEGRLLQIQPTQVSDSGRYLCVATN---- 2748
Query: 170 MLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH 229
+GE D+ D Q + + G V+ G L + + ++ E
Sbjct: 2749 --VAGE------DDQDFNVLIQVPPMFQKMG----DVDAGFEPLPHEEE--AQGRVTEYR 2794
Query: 230 RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSG 287
I+ ++ L C P P + WY++ P+ +D + + G L + V+ D+G
Sbjct: 2795 EIV---ENNPAYLYCDTNAIPPPELTWYREGQPLSAADGVSVLQGGRILQLPLVQAEDAG 2851
Query: 288 VWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILN 347
++C A N G+D + Y +L +I ++ E+ +
Sbjct: 2852 RYSCKAANEVGEDWLH---------YELLVLTPPVIPG---------DTQELVEE---VT 2890
Query: 348 VKKDESVILPCSAQGNPLPTIKY 370
V +V L C A GNP P + +
Sbjct: 2891 VNASSAVSLECPALGNPAPAVSW 2913
Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats.
Identities = 79/321 (24%), Positives = 118/321 (36%), Gaps = 64/321 (19%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVIL--GGELVEIASSNQVVVDVGHRIELHC 118
L L V D+G Y+C + + SA A++++ + E V G + L C
Sbjct: 1304 LFLSSVSLADSGEYECQATNEVGSASRRAKLVVYVPPSIREEGHITNVSGLAGQPLTLEC 1363
Query: 119 RVS--PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGEL 176
++ P + AWLKDG LV D D E+ H L G
Sbjct: 1364 DINGFP---APEVAWLKDGQ---------LVGDSGGGWDG-------EEASGHRLLDGSR 1404
Query: 177 IIH--QVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNV 234
+H ++ ES Y C+ N+ G++ N L++ LL A E +L +
Sbjct: 1405 SLHFPRIQESHS-GLYSCQAENQ-AGSAQRDFN---LAVFIPPSLLGAGAAQE---VLGL 1456
Query: 235 KKDESVILPCSAQGNPLPTIKWYKQDSPVEESDR---IQRIGSSLSISHVEESDSGVWNC 291
+ V L C G P P ++W K P+ D +Q G L I D G + C
Sbjct: 1457 AGAD-VTLECQTSGVPTPQVEWTKDGQPILPGDPHILLQEDGQVLRIISSHLGDEGQYQC 1515
Query: 292 VANNSEGQD--KMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVK 349
VA + GQ QL I + +GE+ + E H
Sbjct: 1516 VAFSPAGQQAKDFQLSIHSPPTIWGSNETGEVTV----------------LEGH------ 1553
Query: 350 KDESVILPCSAQGNPLPTIKY 370
+ L C A+G P P I +
Sbjct: 1554 ---TAQLLCEARGMPSPAITW 1571
Score = 44.3 bits (103), Expect = 0.001, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASL-LSVNRGRLSLTENKRLLSAA 223
+G Y + L + Q E DR Y C N+ A SV EN+ L
Sbjct: 2431 EGTYLLAGGWMLKMTQAQEQDR-GLYSCLASNEAGEARRNFSVEVLVPPSIENEDL---- 2485
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYK--QDSPVEESDRIQRIGSSLSISHV 281
++ V + ++ L C+A G+P P + W+K Q VE+ + G+ L I
Sbjct: 2486 -----EEVIKVPEGQTAQLECNATGHPPPKVTWFKDGQSLTVEDPYEMSPDGAFLWIPQA 2540
Query: 282 EESDSGVWNCVANNSEGQ 299
S++G ++C+A+N+ G+
Sbjct: 2541 NLSNAGHYSCIASNAVGE 2558
Score = 40.4 bits (93), Expect = 0.020, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 28/134 (20%)
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESD-RIQRIGSSLSISHVEESDSGVWNCVANNSE 297
S+ L C +G+P P I W K P+ S Q SL+I + D+G + C+A N
Sbjct: 4269 SIQLHCVVRGDPAPDIHWTKDGLPLPISRLHFQLQNGSLTILRTKMDDAGRYQCLAVNEM 4328
Query: 298 GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFE-KHRILNVKKDESVIL 356
G K +L +A +F+ + + + V+ V L
Sbjct: 4329 GTVKKV--------------------------VTVVLQSAPVFQVEPQDVTVRSGVDVEL 4362
Query: 357 PCSAQGNPLPTIKY 370
C A G P+PTI++
Sbjct: 4363 RCRATGEPVPTIEW 4376
Score = 40.0 bits (92), Expect = 0.030, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 241 ILPCSAQGNPLPTIKWYKQDSPVE--ESDRIQRIGSSLSISHVEESDSGVWNCVANNSEG 298
+LPC+A+G+P P I W K V E + L + + E D+G + C A N+ G
Sbjct: 4090 LLPCTAKGSPEPAITWEKDGHLVSGAEGKFTLQPSGELLVKNSEGQDAGTYICTAENAVG 4149
Query: 299 QDKMQLFI 306
+ + ++ +
Sbjct: 4150 RARRRVHL 4157
Score = 32.3 bits (72), Expect = 5.7, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 106/271 (39%), Gaps = 43/271 (15%)
Query: 40 LSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSA--QMSAQVILGGEL 97
+ S WL+ G L+ L+ G+Y C S+ A Q S ++ + +L
Sbjct: 1673 VDSNGTWLEAGGALQ--------LENPGEASGGLYSCVASSPAGEAVLQYSVEMQVPPQL 1724
Query: 98 VEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAG 157
+ QV VG ++L C+ S + + + WL++G R E AG
Sbjct: 1725 LVAEGMGQVTATVGQSLDLPCQASGSPVPTIQ-WLQNG--------------RPAEELAG 1769
Query: 158 MYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNK--LTGASL-LSVNRGRLSLT 214
+ + S G ++ E + + C+ N+ GA + +SV+ ++S+
Sbjct: 1770 V----------QLASQGTILHISHVELNHSGLFACQATNEAGTAGAEVEVSVHGKQVSVN 1819
Query: 215 ENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWY-KQDSPVEESDRIQRIG 273
+ E H + V SA P +W + + + S ++ G
Sbjct: 1820 LGASFSAHHWWGEPHSPFPATCNPPVCRHWSAYPKPSLVERWRGRGNLRGQPSGTVREPG 1879
Query: 274 SSLSISHVEESD---SGVWNCVANNSEGQDK 301
+L +S +E++D GV+ C A N G+ K
Sbjct: 1880 LTL-LSQIEKADLRDEGVYTCSATNLAGESK 1909
Score = 32.0 bits (71), Expect = 8.6, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 7 VKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGL------VLRRNSDEV 60
++S+ ++ P V V G +EL CR + + + + + WL+ G LR D
Sbjct: 4339 LQSAPVFQVEPQ-DVTVRSGVDVELRCRATGEPVPTIE-WLRAGRPLQAGRKLRALPDGS 4396
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGE 96
L L+ V+ DAG+Y+C S A + + GE
Sbjct: 4397 LWLEHVEAGDAGVYECVAHNHLGSVTAKALLAVRGE 4432
>sp|Q8NDA2|HMCN2_HUMAN Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=2
Length = 5065
Score = 78.6 bits (192), Expect = 6e-14, Method: Composition-based stats.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 40/244 (16%)
Query: 66 VQREDAGMYQCHVSADDDSAQMSAQV-ILGGELVEIASSNQVVVDVGHRIELHCRVSPKR 124
V RED+G Y C Q + V + +++ + + +V VG I+L C V
Sbjct: 4187 VSREDSGTYVCWAENRVGRTQAVSFVHVKEAPVLQGEAFSYLVEPVGGSIQLDCVVRGDP 4246
Query: 125 LSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDES 184
+ W+KDGL LR + H+ H L +G L IH+ +
Sbjct: 4247 VPDIH-WIKDGLPLRGS--------------------HLR----HQLQNGSLTIHRTERD 4281
Query: 185 DRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFE-KHRILNVKKDESVILP 243
D R YQC N++ A + + +L +A +F+ + + + V+ + V L
Sbjct: 4282 DAGR-YQCLAENEMGVAKKVVI-----------LVLQSAPVFQVEPQDMTVRSGDDVALR 4329
Query: 244 CSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNCVANNSEGQDKM 302
C A G P PTI+W + P+ S R++ + SL + +VE D+G ++CVA+N G
Sbjct: 4330 CQATGEPTPTIEWLQAGQPLRASRRLRTLPDGSLWLENVETGDAGTYDCVAHNLLGSATA 4389
Query: 303 QLFI 306
+ F+
Sbjct: 4390 RAFL 4393
Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats.
Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 65/317 (20%)
Query: 18 SGQVVVDVGHRIELHC--RVSPKRLSSAKAWLKDGLVLRRNSDEV-------LVLDRVQR 68
+G+V V H ++L C R P + W KDG +L ++ V L L R Q
Sbjct: 1509 TGEVAVMEDHLVQLLCEARGVP---TPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQS 1565
Query: 69 EDAGMYQCHVSADDDSAQMSAQV-ILGGELVEIASSNQVVVDV--GHRIELHCRVSPKRL 125
DAG+Y C S +A+ + ++ + +E A VV G + L C V+
Sbjct: 1566 SDAGVYTCKASNAVGAAEKATRLDVYVPPTIEGAGGRPYVVKAVAGRPVALEC-VARGHP 1624
Query: 126 SSAKAWLKDGLVLRRNSDE-------VLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
S +W +GL + +++ VL L+ +G+Y C +GE ++
Sbjct: 1625 SPTLSWHHEGLPVAESNESRLETDGSVLRLESPGEASSGLYSCVASS------PAGEAVL 1678
Query: 179 HQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDE 238
E + +LL A + + I+ +
Sbjct: 1679 QYSVE-----------------------------VQVPPQLLVAEGLGQVTTIVG----Q 1705
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ--RIGSSLSISHVEESDSGVWNCVANNS 296
+ LPC A G+P+PTI+W + P EE +Q G++L I HVE SG++ C A N
Sbjct: 1706 PLELPCQASGSPVPTIQWLQNGRPAEELAGVQVASQGTTLHIDHVELDHSGLFACQATNE 1765
Query: 297 EGQDKMQLFIQYAHGKY 313
G ++ + HG++
Sbjct: 1766 AGTAGAEVEVS-VHGEW 1781
Score = 66.6 bits (161), Expect = 3e-10, Method: Composition-based stats.
Identities = 100/400 (25%), Positives = 145/400 (36%), Gaps = 91/400 (22%)
Query: 21 VVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVL------------RRNSDEVLVLDRVQR 68
V V++G L CR + + + DG L R+ VL + V
Sbjct: 795 VTVELGRSALLACRATGRPPPTVTWRRGDGQPLGLRLGAGRGSRSRQPDSGVLFFESVAP 854
Query: 69 EDAGMYQCHVSADDDSAQMSAQVILGGELV-EIASSNQVV-VDVGHRIELHCRVSPKRLS 126
ED Y C Q A++I+ G +IASS V V G + L C V R
Sbjct: 855 EDQAPYVCEARNVFGKVQAEARLIVTGHAPPQIASSAPTVRVLEGQPVSLPCIVLAGRPL 914
Query: 127 SAKAWLKDGLVLRRNS------DEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQ 180
+ WLKDG L S D L LDR +E AG Y C + EL++ Q
Sbjct: 915 PERHWLKDGRPLPPGSRHSIRADGSLHLDRALQEHAGRYSCVATNTAGSQHRDVELVV-Q 973
Query: 181 VDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESV 240
V R+ T H I N S
Sbjct: 974 VPP--------------------------RIHPTAT------------HHITNEGVPAS- 994
Query: 241 ILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS--SLSISHVEESDSGVWNCVANNSEG 298
LPC A G P PTI W K+ + + + +L I+ D+G + C A N+ G
Sbjct: 995 -LPCVASGVPAPTITWTKETNALTSRGPHYNVSKEGTLLIAQPSAQDAGAYVCTATNTVG 1053
Query: 299 --QDKMQLFI------QYAHGKYHMLSSGELIIHQVD----------------EKNKRLL 334
+M+L + +Y +Y +L SG L + QV + R +
Sbjct: 1054 FSSQEMRLSVNRLALSKYVWEEYGLLPSGSLRLAQVQVGDSGHYECTASNPAGSASHRYV 1113
Query: 335 SAAKMFEK----HRILNVKKDESVILPCSAQGNPLPTIKY 370
++ + R+L V E++ L C A+GNP P + +
Sbjct: 1114 LGVQVPPQVQPGPRVLKVLVGEALDLNCVAEGNPEPQLSW 1153
Score = 66.2 bits (160), Expect = 4e-10, Method: Composition-based stats.
Identities = 100/411 (24%), Positives = 154/411 (37%), Gaps = 94/411 (22%)
Query: 21 VVVDVGHRIELHC--RVSPKRLSSAKAWLKDGLVLRRNSDE---VLVLDRVQREDAGMYQ 75
VVV G +EL C R P L S W+KDG L S E L L+ V D+G Y
Sbjct: 3416 VVVVRGSLVELPCEARGVPLPLVS---WMKDGEPLLSQSLEQGPSLQLEAVGAGDSGTYS 3472
Query: 76 CHVSADDDSAQMSAQVILGGELVEIASSNQ---VVVDVGHRIELHCRVSPKRLSSAKAWL 132
C ++ A+ Q+ + E I S Q + + G +EL C + W
Sbjct: 3473 CVAVSEAGEARRHFQLTVM-EPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNI-TWH 3530
Query: 133 KDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHM---------------------- 170
KDG L R + ++ DAG+Y C E +
Sbjct: 3531 KDGQALTRLENNSRATRVLRVRDAGLYTCLAESPAGAIEKSFRVRVQAPPNIVGPRGPRF 3590
Query: 171 ---LSSGELII--------------HQ---VDESDRYRSYQCRGVNKLTGASLLSVNRGR 210
L+ G+L++ H+ V + D + + RG L +L + + G
Sbjct: 3591 VVGLAPGQLVLECSVEAEPAPKITWHRDGIVLQEDAHTQFPERG-RFLQLQALSTADSGD 3649
Query: 211 LSLTENKRLLSAAKMF--EKHRI---------LNVKKDESVILPCSAQGNPLPTIKWYKQ 259
S T S + F E H + +NV +++ +LPC A G P P + W K
Sbjct: 3650 YSCTARNAAGSTSVAFRVEIHTVPTIRSGPPAVNVSVNQTALLPCQADGVPAPLVSWRKD 3709
Query: 260 DSPVE-ESDRIQRIGS-SLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLS 317
P++ S R + + SL I V D+G + C+A+NS G D+
Sbjct: 3710 RVPLDPRSPRFEILPEGSLRIQPVLAQDAGHYLCLASNSAGSDRQG-------------- 3755
Query: 318 SGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTI 368
++ R+L + L + +LPC A G+P P +
Sbjct: 3756 -----------RDLRVLEPPAIAPSPSNLTLTAHTPALLPCEASGSPKPLV 3795
Score = 65.9 bits (159), Expect = 5e-10, Method: Composition-based stats.
Identities = 93/392 (23%), Positives = 146/392 (37%), Gaps = 75/392 (19%)
Query: 16 SPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNS------DEVLVLDRVQRE 69
S + V V G + L C V R + WLKDG L S D L LDR +E
Sbjct: 889 SSAPTVRVLEGQPVSLPCIVLAGRPLPERHWLKDGRPLPPGSRHSIRADGSLHLDRALQE 948
Query: 70 DAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAK 129
AG Y C + S ++++ ++ + + G L C V+ +
Sbjct: 949 HAGRYSCVATNTAGSQHRDVELVVQVPPRIHPTATHHITNEGVPASLPC-VASGVPAPTI 1007
Query: 130 AWLKDGLVLRR-------NSDEVLVLDRVQREDAGMYQCHIEDG---------------- 166
W K+ L + + L++ + +DAG Y C +
Sbjct: 1008 TWTKETNALTSRGPHYNVSKEGTLLIAQPSAQDAGAYVCTATNTVGFSSQEMRLSVNRLA 1067
Query: 167 -------KYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRL 219
+Y +L SG L + QV D Y+C N AS +R L + ++
Sbjct: 1068 LSKYVWEEYGLLPSGSLRLAQVQVGDS-GHYECTASNPAGSAS----HRYVLGVQVPPQV 1122
Query: 220 LSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSIS 279
R+L V E++ L C A+GNP P + W K D V + Q S+ +
Sbjct: 1123 QPGP------RVLKVLVGEALDLNCVAEGNPEPQLSWSK-DGVVLQGRGPQ---GSVHFA 1172
Query: 280 HVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKM 339
+ SD+G + C A+NS G D ++ ++ + DE + L A
Sbjct: 1173 AIRTSDAGRYRCEASNSAGVDAWEVELRVLEPPH----------WGADETSGLLERVA-- 1220
Query: 340 FEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
E+ LPC A+G P P + +R
Sbjct: 1221 -----------GENASLPCPARGTPKPQVTWR 1241
Score = 65.5 bits (158), Expect = 6e-10, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 115/279 (41%), Gaps = 62/279 (22%)
Query: 46 WLKDGLVLRR------NSDEVLV-LDRVQREDAGMYQC----HVSADDDSAQMS---AQV 91
W KDG L R + D VL+ + + AG Y C V Q+S A
Sbjct: 2479 WFKDGRPLARGDAHHISPDGVLLQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPT 2538
Query: 92 ILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV---- 147
ILGG E ++ +V V V + I L C + S W+KDG + + L+
Sbjct: 2539 ILGG--AEDSADEEVTVTVNNPISLICE-ALAFPSPNITWMKDGAPFEASRNIQLLPGTH 2595
Query: 148 ---LDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLL 204
+ Q+EDAG Y C ++ +++ E+ ++Y V L S+
Sbjct: 2596 GLQILNAQKEDAGQYTC--------------VVTNELGEA--VKNYH---VEVLIPPSIS 2636
Query: 205 SVNR-GRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV 263
+ G + + E K K + ++ L C + P PTI+WYK PV
Sbjct: 2637 KDDPLGEVGVKEVK----------------TKVNSTLTLECESWAVPPPTIRWYKDGQPV 2680
Query: 264 EESDRIQRIGSS--LSISHVEESDSGVWNCVANNSEGQD 300
S R+Q +G L I + SDSG + CVA N G+D
Sbjct: 2681 TPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGED 2719
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 78/306 (25%), Positives = 115/306 (37%), Gaps = 66/306 (21%)
Query: 17 PSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG--LVLRRNSDEV-----LVLDRVQRE 69
P V+V VG + L C + W KDG LVL + + + L + Q
Sbjct: 3038 PQDAVLVRVGDKAVLSCETDALPEPTV-TWYKDGQPLVLAQRTQALRGGQRLEIQEAQVS 3096
Query: 70 DAGMYQCHVSADDDSA----QMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRL 125
D G+Y C VS A ++ QV E + + +QV G + L C VS
Sbjct: 3097 DKGLYSCKVSNVAGEAVRTFTLTVQVPPTFENPKTETVSQVA---GSPLVLTCDVSGVPA 3153
Query: 126 SSAKAWLKDGLVLRRNSDEVLV-------LDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+ WLKD + + ++ +V L R+Q AG Y C E+
Sbjct: 3154 PTV-TWLKDRMPVESSAVHGVVSRGGRLQLSRLQPAQAGTYTCVAENT------------ 3200
Query: 179 HQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDE 238
Q A L++ R+ S+ E H V + +
Sbjct: 3201 ------------QAEARKDFVVAVLVA-----------PRIRSSGVAREHH----VLEGQ 3233
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESD----RIQRIGSSLSISHVEESDSGVWNCVAN 294
V L C A G P P + W K SP+ + R G SL + + SD+G + CVA+
Sbjct: 3234 EVRLDCEADGQPPPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASDAGAYTCVAH 3293
Query: 295 NSEGQD 300
N G+D
Sbjct: 3294 NPAGED 3299
Score = 59.3 bits (142), Expect = 5e-08, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 116/297 (39%), Gaps = 66/297 (22%)
Query: 18 SGQVVVDVGHRIELHC--RVSPKRLSSAKAWLKDGL-------VLRRNSDEVLVLDRVQR 68
SG +V G + + C R SP S WLKDGL L S L + +VQ
Sbjct: 3320 SGTLVSRPGELVTMVCPVRGSPPIHVS---WLKDGLPLPLSQRTLLHGSGHTLRISKVQL 3376
Query: 69 EDAGMYQCHVSADDDSA--QMSAQVILGGELVEIASSNQVVVDVGHRIELHC--RVSPKR 124
DAG++ C ++ A + QV + L + N VVV G +EL C R P
Sbjct: 3377 ADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPCEARGVPLP 3436
Query: 125 LSSAKAWLKDGLVLRRNSDE---VLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQV 181
L S W+KDG L S E L L+ V D+G Y C + + +
Sbjct: 3437 LVS---WMKDGEPLLSQSLEQGPSLQLEAVGAGDSGTYSC--------------VAVSEA 3479
Query: 182 DESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVI 241
E+ R+ +L++ E + + + E L++ +
Sbjct: 3480 GEARRHF---------------------QLTVMEPPHIEDSGQPTE----LSLTPGAPME 3514
Query: 242 LPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEG 298
L C AQG P P I W+K + + R L + D+G++ C+A + G
Sbjct: 3515 LLCDAQGTPQPNITWHKDGQALTRLENNSRATRVLRV-----RDAGLYTCLAESPAG 3566
Score = 59.3 bits (142), Expect = 5e-08, Method: Composition-based stats.
Identities = 78/371 (21%), Positives = 127/371 (34%), Gaps = 85/371 (22%)
Query: 20 QVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSD-------EVLVLDRVQREDAG 72
QV + + L C V + W KD L + L L R + D+G
Sbjct: 2946 QVTAILNSSVSLPCDVHAHP-NPEVTWYKDSQALSLGEEVFLLPGTHTLQLGRARLSDSG 3004
Query: 73 MYQCHV----SADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSA 128
MY C D Q+S V + V+V VG + L C +
Sbjct: 3005 MYTCEALNAAGRDQKLVQLSVLVPPAFRQAPRGPQDAVLVRVGDKAVLSCETDALPEPTV 3064
Query: 129 KAWLKDG--LVLRRNSDEV-----LVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQV 181
W KDG LVL + + + L + Q D G+Y C + + + + L + QV
Sbjct: 3065 -TWYKDGQPLVLAQRTQALRGGQRLEIQEAQVSDKGLYSCKVSNVAGEAVRTFTLTV-QV 3122
Query: 182 DESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVI 241
+ + + + V+++ G+ L +
Sbjct: 3123 PPT--FENPKTETVSQVAGSPL-------------------------------------V 3143
Query: 242 LPCSAQGNPLPTIKWYKQDSPVEES--DRIQRIGSSLSISHVEESDSGVWNCVANNSEGQ 299
L C G P PT+ W K PVE S + G L +S ++ + +G + CVA N++ +
Sbjct: 3144 LTCDVSGVPAPTVTWLKDRMPVESSAVHGVVSRGGRLQLSRLQPAQAGTYTCVAENTQAE 3203
Query: 300 DKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCS 359
+ + R+ S+ E H V + + V L C
Sbjct: 3204 ARKDFVVAVLVA-------------------PRIRSSGVAREHH----VLEGQEVRLDCE 3240
Query: 360 AQGNPLPTIKY 370
A G P P + +
Sbjct: 3241 ADGQPPPDVAW 3251
Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 35/206 (16%)
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+GK+ + SGEL++ ++ D +Y C N +V R R + +L
Sbjct: 4082 EGKFTIQPSGELLVKNLEGQDA-GTYTCTAEN--------AVGRARRRVHLTILVLPVFT 4132
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEES 284
R L + + + L C+A+G+P P I W D PV E Q GS+L + V
Sbjct: 4133 TLPGDRSLRL--GDRLWLRCAARGSPTPRIGWTVNDRPVTEGVSEQDGGSTLQRAAVSRE 4190
Query: 285 DSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHR 344
DSG + C A N G+ + + + H K + GE + V+
Sbjct: 4191 DSGTYVCWAENRVGRTQA---VSFVHVKEAPVLQGEAFSYLVEPVGG------------- 4234
Query: 345 ILNVKKDESVILPCSAQGNPLPTIKY 370
S+ L C +G+P+P I +
Sbjct: 4235 --------SIQLDCVVRGDPVPDIHW 4252
Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 4 FIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRN------S 57
F+ VK + ++ +V VG I+L C V + W+KDGL LR +
Sbjct: 4211 FVHVKEAPVLQGEAFSYLVEPVGGSIQLDCVVRGDPVPDIH-WIKDGLPLRGSHLRHQLQ 4269
Query: 58 DEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELH 117
+ L + R +R+DAG YQC + A+ ++L V + V G + L
Sbjct: 4270 NGSLTIHRTERDDAGRYQCLAENEMGVAKKVVILVLQSAPVFQVEPQDMTVRSGDDVALR 4329
Query: 118 CRVSPKRLSSAKAWLKDGLVLRRNS------DEVLVLDRVQREDAGMYQC 161
C+ + + + + WL+ G LR + D L L+ V+ DAG Y C
Sbjct: 4330 CQATGEPTPTIE-WLQAGQPLRASRRLRTLPDGSLWLENVETGDAGTYDC 4378
Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats.
Identities = 84/408 (20%), Positives = 149/408 (36%), Gaps = 112/408 (27%)
Query: 31 LHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQ 90
L R RL + + + G +S E+L R + + G Y+C + + + AQ
Sbjct: 458 LQLRRGEARLGEERHFQESG----NSSWEIL---RASKAEEGTYECTAVSRAGTGRAKAQ 510
Query: 91 VILGGELVEIASSNQVVVDVGHRIELHCRV---SPKRLSSAKAWLKDGLVLRRNSDEVLV 147
+++ ++ + V V G L CRV +P L+ W++D VL ++ V
Sbjct: 511 IVVTDPPPQLVPAPNVTVSPGETAVLSCRVLGEAPYNLT----WVRDWRVLPASTGRVAQ 566
Query: 148 LDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVN 207
L + E +G+ + G+Y ++S N +T AS+ +
Sbjct: 567 LADLSLEISGIIP--TDGGRYQCVASN--------------------ANGVTRASVWLLV 604
Query: 208 RGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESD 267
R ++ + ++++ F + V + CSA G P P I W ++ ++E
Sbjct: 605 REAPQVS----IHTSSQHFSQ--------GVEVKVSCSASGYPTPHISWSRESQALQEDS 652
Query: 268 RIQ-RIGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYA----------------- 309
RI +L I V D+G ++C A N G D+ + + Y
Sbjct: 653 RIHVDAQGTLIIQGVAPEDAGNYSCQATNEVGTDQETVTLYYTDPPSVSAVNAVVLVAVG 712
Query: 310 --------------------HGKYHML------SSGELIIHQVDEKNKRLLS-------- 335
G M+ SSG+L I E++ +
Sbjct: 713 EEAVLVCEASGVPPPRVIWYRGGLEMILAPEGSSSGKLRIPAAQERDAGTYTCRAVNELG 772
Query: 336 ------------AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
A ++ E R + V+ S +L C A G P PT+ +R
Sbjct: 773 DASAEIQLAVGHAPQLTELPRDVTVELGRSALLACRATGRPPPTVTWR 820
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Query: 237 DESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNCVANN 295
+E V+LPC A G P PTI W K+ V Q + G L I+H D+G + C+A N
Sbjct: 3962 EEEVLLPCEASGIPRPTITWQKEGLNVATGVSTQVLPGGQLRIAHASPEDAGNYLCIAKN 4021
Query: 296 SEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVI 355
S G A GK ++ +I L+ +
Sbjct: 4022 SAGS---------AMGKTRLVVQVPPVIENGLPD----------------LSTTEGSHAF 4056
Query: 356 LPCSAQGNPLPTIKY 370
LPC A+G+P P I +
Sbjct: 4057 LPCKARGSPEPNITW 4071
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 90/383 (23%), Positives = 143/383 (37%), Gaps = 73/383 (19%)
Query: 14 EMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV-------LDRV 66
E S +V V V + I L C + S W+KDG + + L+ +
Sbjct: 2544 EDSADEEVTVTVNNPISLICE-ALAFPSPNITWMKDGAPFEASRNIQLLPGTHGLQILNA 2602
Query: 67 QREDAGMYQCHVSADDDSAQMSAQV-------ILGGELVEIASSNQVVVDVGHRIELHCR 119
Q+EDAG Y C V+ + A + V I + + +V V + L C
Sbjct: 2603 QKEDAGQYTCVVTNELGEAVKNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNSTLTLECE 2662
Query: 120 ---VSPKRLSSAKAWLKDGLVLRRNS-------DEVLVLDRVQREDAGMYQCHIEDGKYH 169
V P + W KDG + +S +L + Q D+G Y C +
Sbjct: 2663 SWAVPPPTIR----WYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATN---- 2714
Query: 170 MLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH 229
+GE D+ D Q + + G S LS E R + E
Sbjct: 2715 --VAGE------DDQDFNVLIQVPPMFQKVGD--FSAAFEILSREEEAR----GGVTEYR 2760
Query: 230 RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSG 287
I+ ++ L C P P + WY++D P+ D + + G L I V ++G
Sbjct: 2761 EIV---ENNPAYLYCDTNAIPPPDLTWYREDQPLSAGDEVSVLQGGRVLQIPLVRAENAG 2817
Query: 288 VWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILN 347
++C A+N G+D + Y +L +I L ++ E+ +
Sbjct: 2818 RYSCKASNEVGEDWLH---------YELLVLTPPVI---------LGDTEELVEE---VT 2856
Query: 348 VKKDESVILPCSAQGNPLPTIKY 370
V +V L C A GNP+PTI +
Sbjct: 2857 VNASSTVSLQCPALGNPVPTISW 2879
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESD-RIQRIGSSLSISHVEESDSGVWNCVANNSE 297
S+ L C +G+P+P I W K P+ S R Q SL+I E D+G + C+A N
Sbjct: 4235 SIQLDCVVRGDPVPDIHWIKDGLPLRGSHLRHQLQNGSLTIHRTERDDAGRYQCLAENEM 4294
Query: 298 GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFE-KHRILNVKKDESVIL 356
G K + + +L +A +F+ + + + V+ + V L
Sbjct: 4295 GVAKKVVIL--------------------------VLQSAPVFQVEPQDMTVRSGDDVAL 4328
Query: 357 PCSAQGNPLPTIKY 370
C A G P PTI++
Sbjct: 4329 RCQATGEPTPTIEW 4342
Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 50/253 (19%)
Query: 60 VLVLDRVQREDAGMYQCHVSAD--DDSAQ-----MSAQVILGG--ELVEIASSNQVVVDV 110
VL + V+ E+AG Y C S + +D ++ VILG ELVE +V V+
Sbjct: 2805 VLQIPLVRAENAGRYSCKASNEVGEDWLHYELLVLTPPVILGDTEELVE-----EVTVNA 2859
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHM 170
+ L C + + +WL++GL + R+Q +EDG+
Sbjct: 2860 SSTVSLQCPALGNPVPTI-SWLQNGLPFSPSP-------RLQV---------LEDGQVLQ 2902
Query: 171 LSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHR 230
+S+ E+ D + SY C N+ A L R ++ ++ + +
Sbjct: 2903 VSTAEV----ADAA----SYMCVAENQAGSAEKLFTLRVQVPPR-----IAGLDLEQVTA 2949
Query: 231 ILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSGV 288
ILN SV LPC +P P + WYK + + + + +L + SDSG+
Sbjct: 2950 ILN----SSVSLPCDVHAHPNPEVTWYKDSQALSLGEEVFLLPGTHTLQLGRARLSDSGM 3005
Query: 289 WNCVANNSEGQDK 301
+ C A N+ G+D+
Sbjct: 3006 YTCEALNAAGRDQ 3018
Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 26/141 (18%)
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSGVW 289
+ V +V L C A GNP+PTI W + P S R+Q + G L +S E +D+ +
Sbjct: 2855 VTVNASSTVSLQCPALGNPVPTISWLQNGLPFSPSPRLQVLEDGQVLQVSTAEVADAASY 2914
Query: 290 NCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVK 349
CVA N G S+ +L +V + ++ + + ILN
Sbjct: 2915 MCVAENQAG------------------SAEKLFTLRVQVPPR--IAGLDLEQVTAILN-- 2952
Query: 350 KDESVILPCSAQGNPLPTIKY 370
SV LPC +P P + +
Sbjct: 2953 --SSVSLPCDVHAHPNPEVTW 2971
Score = 50.8 bits (120), Expect = 2e-05, Method: Composition-based stats.
Identities = 87/396 (21%), Positives = 142/396 (35%), Gaps = 101/396 (25%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDV-GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVL 61
L +QV + +P + V V G + L C VS + WLKD + + ++ +
Sbjct: 3118 LTVQVPPTFE---NPKTETVSQVAGSPLVLTCDVSGVPAPTV-TWLKDRMPVESSAVHGV 3173
Query: 62 V-------LDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVV----VDV 110
V L R+Q AG Y C A++ A+ ++ + S+ V V
Sbjct: 3174 VSRGGRLQLSRLQPAQAGTYTC--VAENTQAEARKDFVVAVLVAPRIRSSGVAREHHVLE 3231
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRN---------SDEVLVLDRVQREDAGMYQC 161
G + L C + AWLKDG L ++ LVL ++ DAG Y C
Sbjct: 3232 GQEVRLDCEADGQPPPDV-AWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASDAGAYTC 3290
Query: 162 HI-----EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
ED + H VN L ++ G +L
Sbjct: 3291 VAHNPAGEDARLHT------------------------VNVLVPPTIKQGADGSGTLVS- 3325
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDR--IQRIGS 274
+ E V + C +G+P + W K P+ S R + G
Sbjct: 3326 ------------------RPGELVTMVCPVRGSPPIHVSWLKDGLPLPLSQRTLLHGSGH 3367
Query: 275 SLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLL 334
+L IS V+ +D+G++ CVA + G A + + ++ V+ +N ++
Sbjct: 3368 TLRISKVQLADAGIFTCVAASPAG---------VADRNFTLQVQVPPVLEPVEFQNDVVV 3418
Query: 335 SAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+ E LPC A+G PLP + +
Sbjct: 3419 VRGSLVE--------------LPCEARGVPLPLVSW 3440
Score = 49.3 bits (116), Expect = 5e-05, Method: Composition-based stats.
Identities = 76/314 (24%), Positives = 121/314 (38%), Gaps = 70/314 (22%)
Query: 14 EMSPSGQVV-VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLR-RNSDEVLVLDRVQREDA 71
++ P +V+ V VG ++L+C V+ +W KDG+VL+ R + ++ DA
Sbjct: 1121 QVQPGPRVLKVLVGEALDLNC-VAEGNPEPQLSWSKDGVVLQGRGPQGSVHFAAIRTSDA 1179
Query: 72 GMYQCHVS--ADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHC--RVSPKRLSS 127
G Y+C S A D+ ++ +V+ +S + G L C R +PK
Sbjct: 1180 GRYRCEASNSAGVDAWEVELRVLEPPHWGADETSGLLERVAGENASLPCPARGTPK---P 1236
Query: 128 AKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRY 187
W K S E L H + G +L G L + V +D
Sbjct: 1237 QVTWRKG------PSSEPL---------------HGQPG-VAVLEEGSLFLASVSPADS- 1273
Query: 188 RSYQCRGVNKLTGASLLSVNRGRL------SLTENKRLLSAAKMFEKHRILNVKKDESVI 241
Y+C+ N++ S R +L S+ E+ R + + M +S+
Sbjct: 1274 GDYECQATNEVGSTS----RRAKLVVYVPPSIREDGRKANVSGM----------AGQSLT 1319
Query: 242 LPCSAQGNPLPTIKWYKQDSPVE-----------------ESDRIQRIGSSLSISHVEES 284
L C A G P+P I W K V R+ G SL ++E
Sbjct: 1320 LECDANGFPVPEIVWLKDAQLVGVPLGWAGYGWDLGWGQVGGHRLLDEGQSLHFPRIQEG 1379
Query: 285 DSGVWNCVANNSEG 298
DSG+++C A N G
Sbjct: 1380 DSGLYSCRAENQAG 1393
Score = 49.3 bits (116), Expect = 5e-05, Method: Composition-based stats.
Identities = 84/340 (24%), Positives = 121/340 (35%), Gaps = 58/340 (17%)
Query: 35 VSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSAD--DDSAQMSAQVI 92
V P R+ + L+ L +S L + Q DAG Y C + D SA++ V
Sbjct: 724 VPPPRVIWYRGGLEMILAPEGSSSGKLRIPAAQERDAGTYTCRAVNELGDASAEIQLAVG 783
Query: 93 LGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQ 152
+L E+ V V++G L CR + R W RR + L L
Sbjct: 784 HAPQLTEL--PRDVTVELGRSALLACRAT-GRPPPTVTW-------RRGDGQPLGL---- 829
Query: 153 REDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLS 212
R AG + SG L V D+ Y C N RL
Sbjct: 830 RLGAG------RGSRSRQPDSGVLFFESVAPEDQ-APYVCEARNVFGKVQA----EARLI 878
Query: 213 LTENKRLLSAAKMFEKHRILNVKKDESVILPCSA-QGNPLPTIKWYKQDSPVEESDRIQ- 270
+T + + ++ + V + + V LPC G PLP W K P+ R
Sbjct: 879 VTGH----APPQIASSAPTVRVLEGQPVSLPCIVLAGRPLPERHWLKDGRPLPPGSRHSI 934
Query: 271 RIGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKN 330
R SL + + +G ++CVA N+ G + EL++ +
Sbjct: 935 RADGSLHLDRALQEHAGRYSCVATNTAGSQHRDV---------------ELVV----QVP 975
Query: 331 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
R+ A H I N S LPC A G P PTI +
Sbjct: 976 PRIHPTA----THHITNEGVPAS--LPCVASGVPAPTITW 1009
Score = 48.9 bits (115), Expect = 6e-05, Method: Composition-based stats.
Identities = 77/311 (24%), Positives = 120/311 (38%), Gaps = 60/311 (19%)
Query: 11 LSIEMSPS--GQ---VVVDVGHRIELHCR---VSPKRLSSAKAWLKDGLVLRR------N 56
L + M PS G+ V V + L C+ + P LS W KDG L +
Sbjct: 2065 LQVHMPPSILGEELNVSVVANESVALECQSHAMPPPVLS----WWKDGRPLEPRPGVHLS 2120
Query: 57 SDEVLV-LDRVQREDAGMYQCHVSADDDSAQMSAQV-ILGGELVEIASSNQVVVDVGHRI 114
+D+ L+ +DR DAG Y C ++ + + + + S+ + V GH
Sbjct: 2121 ADKALLQVDRADVWDAGHYTCEALNQAGHSEKHYNLNVWVAPVFPLRESHTLTVREGHPT 2180
Query: 115 ELHCRVS----PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHM 170
L C PK +W KDG L E AG+ H+
Sbjct: 2181 SLSCECRGVPFPK-----ISWRKDGQPL-------------PGEGAGLQ---------HV 2213
Query: 171 LSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHR 230
+ G L+ + + +Y C N + +S L L E A E
Sbjct: 2214 SAVGRLLYLGQAQLAQEGTYTCECSNVVGNSS------QDLQL-EVHVPPQIAGPREPPT 2266
Query: 231 ILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV--EESDRIQRIGSSLSISHVEESDSGV 288
++V +D L C+A G P PT+ W + PV E ++Q G SL + + + +G
Sbjct: 2267 QVSVVQDGVATLECNATGKPPPTVTWERDGQPVGAELGLQLQNQGQSLHVERAQAAHTGR 2326
Query: 289 WNCVANNSEGQ 299
++CVA N G+
Sbjct: 2327 YSCVAENLAGR 2337
Score = 48.9 bits (115), Expect = 6e-05, Method: Composition-based stats.
Identities = 89/398 (22%), Positives = 139/398 (34%), Gaps = 106/398 (26%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSD---- 58
L + V +++ S G V+V+ R+ + +P S WLKDG +
Sbjct: 1971 LRVNVPPRITLPPSLPGPVLVNTPVRLTCNATGAP---SPTLMWLKDGNPVSPAGTPGLQ 2027
Query: 59 -----EVLVLDRVQREDAGMYQC-HVSA-DDDSAQMSAQV-----ILGGELVEIASSNQV 106
VL L + D+G Y C VSA +D + QV ILG EL V
Sbjct: 2028 VFPGGRVLTLASARASDSGRYSCVAVSAVGEDRQDVVLQVHMPPSILGEEL-------NV 2080
Query: 107 VVDVGHRIELHCR---VSPKRLSSAKAWLKDGLVLRR------NSDEVLV-LDRVQREDA 156
V + L C+ + P LS W KDG L ++D+ L+ +DR DA
Sbjct: 2081 SVVANESVALECQSHAMPPPVLS----WWKDGRPLEPRPGVHLSADKALLQVDRADVWDA 2136
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
G Y C ++Q S+++ + N
Sbjct: 2137 GHYTCEA--------------LNQAGHSEKHYNL-------------------------N 2157
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEES----DRIQRI 272
+ + E H L V++ L C +G P P I W K P+ + +
Sbjct: 2158 VWVAPVFPLRESH-TLTVREGHPTSLSCECRGVPFPKISWRKDGQPLPGEGAGLQHVSAV 2216
Query: 273 GSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKR 332
G L + + + G + C +N G L +L +H +
Sbjct: 2217 GRLLYLGQAQLAQEGTYTCECSNVVGNSSQDL---------------QLEVHVPPQ---- 2257
Query: 333 LLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
A E ++V +D L C+A G P PT+ +
Sbjct: 2258 ---IAGPREPPTQVSVVQDGVATLECNATGKPPPTVTW 2292
Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 240 VILPCSAQGNPLPTIKWYKQDSPVE--ESDRIQRIGSSLSISHVEESDSGVWNCVANNSE 297
+ L C A G P P I+W++ + PV E + G L ++ +E DSG+++C+A+N
Sbjct: 2370 LTLLCEAMGIPPPAIRWFRGEEPVSPGEDTYLLAGGWMLKMTQTQEQDSGLYSCLASNEA 2429
Query: 298 GQDKMQLFIQ 307
G+ + ++
Sbjct: 2430 GEARRNFSVE 2439
Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESD---RIQRIGSSLSISHVEESDSGV 288
L+ + LPC A+G+P P I W K PV ++ IQ G L + ++E D+G
Sbjct: 4047 LSTTEGSHAFLPCKARGSPEPNITWDKDGQPVSGAEGKFTIQPSG-ELLVKNLEGQDAGT 4105
Query: 289 WNCVANNSEGQDKMQLFI 306
+ C A N+ G+ + ++ +
Sbjct: 4106 YTCTAENAVGRARRRVHL 4123
Score = 45.4 bits (106), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEE--SDRIQRIGSSLSISHVEESDSGVWNC 291
V ++ SV L C A G P P + W+K PV + G L I + SD+G + C
Sbjct: 1897 VLENASVTLECLASGVPPPDVSWFKGHQPVSSWMGVTVSVDGRVLRIEQAQLSDAGSYRC 1956
Query: 292 VANNSEGQDKMQ 303
VA+N G +++
Sbjct: 1957 VASNVAGSTELR 1968
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 27/134 (20%)
Query: 240 VILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS--LSISHVEESDSGVWNCVANNSE 297
V+L C + G P PT+ W K + + R+ S L I +G + C A NS
Sbjct: 3874 VVLTCHSTGIPAPTVSWSKAGAQLGARGSGYRVSPSGALEIGQALPIHAGRYTCSARNSA 3933
Query: 298 GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILP 357
G +F+ Q K L S ++ +E V+LP
Sbjct: 3934 GVAHKHVFLTV----------------QASPVVKPLPS---------VVRAVAEEEVLLP 3968
Query: 358 CSAQGNPLPTIKYR 371
C A G P PTI ++
Sbjct: 3969 CEASGIPRPTITWQ 3982
Score = 41.2 bits (95), Expect = 0.014, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 26/142 (18%)
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS--LSISHVEESDSGVW 289
++V +ESV L C + P P + W+K P+E + L + + D+G +
Sbjct: 2080 VSVVANESVALECQSHAMPPPVLSWWKDGRPLEPRPGVHLSADKALLQVDRADVWDAGHY 2139
Query: 290 NCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVK 349
C A N G + K++ L N + + E H L V+
Sbjct: 2140 TCEALNQAGHSE----------KHYNL-------------NVWVAPVFPLRESH-TLTVR 2175
Query: 350 KDESVILPCSAQGNPLPTIKYR 371
+ L C +G P P I +R
Sbjct: 2176 EGHPTSLSCECRGVPFPKISWR 2197
Score = 40.0 bits (92), Expect = 0.027, Method: Composition-based stats.
Identities = 69/321 (21%), Positives = 119/321 (37%), Gaps = 66/321 (20%)
Query: 1 MQLFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG------LVLR 54
+QL + V ++ P QV V L C + K + W +DG L L+
Sbjct: 2248 LQLEVHVPPQIAGPREPPTQVSVVQDGVATLECNATGKPPPTV-TWERDGQPVGAELGLQ 2306
Query: 55 -RNSDEVLVLDRVQREDAGMYQCHVS--ADDDSAQMSAQVILGGELV-EIASSNQVVVDV 110
+N + L ++R Q G Y C A + V++ EL+ ++ + +
Sbjct: 2307 LQNQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAAL 2366
Query: 111 GHRIELHCR---VSPKRLSSAKAWLKDGLVLRRNSDEVLV-------LDRVQREDAGMYQ 160
+ L C + P A W + + D L+ + + Q +D+G+Y
Sbjct: 2367 HSPLTLLCEAMGIPP----PAIRWFRGEEPVSPGEDTYLLAGGWMLKMTQTQEQDSGLYS 2422
Query: 161 CHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLL 220
C L+S E E+ R S V L S+ EN+ L
Sbjct: 2423 C---------LASNE-----AGEARRNFS-----VEVLVPPSI-----------ENEDL- 2451
Query: 221 SAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESD--RIQRIGSSLSI 278
++ V ++ L C+ G+P P + W+K P+ D I G L +
Sbjct: 2452 --------EEVIKVLDGQTAHLMCNVTGHPQPKLTWFKDGRPLARGDAHHISPDGVLLQV 2503
Query: 279 SHVEESDSGVWNCVANNSEGQ 299
S +G ++C+A N+ G+
Sbjct: 2504 LQANLSSAGHYSCIAANAVGE 2524
Score = 38.1 bits (87), Expect = 0.11, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 49/136 (36%), Gaps = 30/136 (22%)
Query: 240 VILPCSAQGNPLPTIKWYKQDSPVEESD---RIQRIGSSLSISHVEESDSGVWNCVANNS 296
V L C G P P ++W K PV ++Q G L I+ D G + CVA +
Sbjct: 1426 VELQCWTSGVPTPQVEWTKDRQPVLPGGPHLQVQEDGQVLRITGSHVGDEGRYQCVAFSP 1485
Query: 297 EGQD--KMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESV 354
GQ QL + + +GE+ V +D V
Sbjct: 1486 AGQQARDFQLRVHAPPTIWGSNETGEVA-------------------------VMEDHLV 1520
Query: 355 ILPCSAQGNPLPTIKY 370
L C A+G P P I +
Sbjct: 1521 QLLCEARGVPTPNITW 1536
Score = 37.7 bits (86), Expect = 0.15, Method: Composition-based stats.
Identities = 72/340 (21%), Positives = 118/340 (34%), Gaps = 79/340 (23%)
Query: 46 WLKDGLVLRRNSD-------EVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELV 98
W +DG+VL+ ++ L L + D+G Y C S ++ +V +
Sbjct: 3615 WHRDGIVLQEDAHTQFPERGRFLQLQALSTADSGDYSCTARNAAGSTSVAFRVEIHTVPT 3674
Query: 99 EIASSNQVVVDVGHRIELHCRVS--PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDA 156
+ V V V L C+ P L S W KD + L S
Sbjct: 3675 IRSGPPAVNVSVNQTALLPCQADGVPAPLVS---WRKDRVPLDPRSP------------- 3718
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
++ +L G L I V D Y C N S S +GR +
Sbjct: 3719 ----------RFEILPEGSLRIQPVLAQDA-GHYLCLASN-----SAGSDRQGR-----D 3757
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQR----- 271
R+L + L + +LPC A G+P P + W+K ++ R+Q+
Sbjct: 3758 LRVLEPPAIAPSPSNLTLTAHTPALLPCEASGSPKPLVVWWKDGQKLDF--RLQQGAYRL 3815
Query: 272 -IGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKN 330
++L ++ DS + CV +N G+ AH Y ++ +H
Sbjct: 3816 LPSNALLLTAPGPQDSAQFECVVSNEVGE---------AHRLY------QVTVH------ 3854
Query: 331 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+ + V V+L C + G P PT+ +
Sbjct: 3855 ----VPPTIADDQTDFTVTMMAPVVLTCHSTGIPAPTVSW 3890
>sp|P68500|CNTN5_MOUSE Contactin-5 OS=Mus musculus GN=Cntn5 PE=1 SV=2
Length = 1098
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 129/330 (39%), Gaps = 86/330 (26%)
Query: 61 LVLDRVQREDAGMYQCHV-SADDDSAQMSAQVILG-------GEL---VEIASSNQVVVD 109
L + +VQ D G Y C V +A ++ +S L GE +E+ V
Sbjct: 253 LYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAA 312
Query: 110 VGHRIELHCRVSPKRLSSAKAWLK-DGLVLR----RNSDEVLVLDRVQREDAGMYQCHIE 164
G +++ C + + W+K +G + R S VL + +Q +DAG+Y+C E
Sbjct: 313 KGTTVKMECFALGNPVPTI-TWMKVNGYIPSKSRLRKSQAVLEIPNLQLDDAGIYECTAE 371
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+ RG N RG+L ++ +
Sbjct: 372 N--------------------------SRGKNSF---------RGQL------QIFTYPH 390
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEES 284
+K + + C A G P PT +W K +P+ R+ + L+I V +S
Sbjct: 391 WVQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGAPLLPQSRVDTVNGILAIQSVNQS 450
Query: 285 DSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHR 344
D+G++ C+A N G + +S EL ++L++ FE ++
Sbjct: 451 DAGMYQCLAENKYGA---------------IYASAEL----------KILASPPSFELNQ 485
Query: 345 I---LNVKKDESVILPCSAQGNPLPTIKYR 371
+ + V KD V++ C QG+P P I +R
Sbjct: 486 VKKSIIVTKDRGVLIECEPQGSPKPAISWR 515
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 51/257 (19%)
Query: 55 RNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRI 114
R S VL + +Q +DAG+Y+C Q+ + + N +D G +
Sbjct: 347 RKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKLNDTQLDSGSPL 406
Query: 115 ELHCRVSPKRLSSAKAWLKDGLVLRRNS-----DEVLVLDRVQREDAGMYQCHIEDGKYH 169
+ C+ + K + + WLK+G L S + +L + V + DAGMYQC E+
Sbjct: 407 QWECKATGKPRPTYR-WLKNGAPLLPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGA 465
Query: 170 MLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH 229
+ +S EL ++L++ FE +
Sbjct: 466 IYASAEL-----------------------------------------KILASPPSFELN 484
Query: 230 RI---LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG-SSLSISHVEESD 285
++ + V KD V++ C QG+P P I W K D V + RI + SL I + ++D
Sbjct: 485 QVKKSIIVTKDRGVLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKAD 544
Query: 286 SGVWNCVANNSEGQDKM 302
G + C N G ++
Sbjct: 545 EGKYICQGVNIFGSAEI 561
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 231 ILNVKKDES-VILPCSAQGNPLPTIKWYKQDSPVE-ESD-RIQRIGSSLSISHVEE-SDS 286
I DE V L C +GNP P+ +W + + + ESD R I + IS+ E DS
Sbjct: 108 IFPTDSDEKKVALNCEVRGNPSPSYRWLRNGTEIALESDYRYSLIDGTFIISNPSELRDS 167
Query: 287 GVWNCVANNSEG 298
G++ C+A NS G
Sbjct: 168 GLYQCLATNSFG 179
>sp|Q6WRI0|IGS10_HUMAN Immunoglobulin superfamily member 10 OS=Homo sapiens GN=IGSF10 PE=2
SV=1
Length = 2623
Score = 74.7 bits (182), Expect = 1e-12, Method: Composition-based stats.
Identities = 96/373 (25%), Positives = 144/373 (38%), Gaps = 76/373 (20%)
Query: 20 QVVVDVGHRIELHCRVSPKRLSSAKAW-LKDGLVLRRNS----------DEVLVLDRVQR 68
++ V G +EL CR + R S W L + V+ +S D LVL +
Sbjct: 1754 EITVHSGSTVELKCR-AEGRPSPTVTWILANQTVVSESSQGSRQAVVTVDGTLVLHNLSI 1812
Query: 69 EDAGMYQCHVS--ADDDSAQMSAQVILGGELVEIASSNQVVVDV-GHRIELHCRVSPKRL 125
D G Y+C S DS + QVI ++ + QV+V G ++L C
Sbjct: 1813 YDRGFYKCVASNPGGQDSLLVKIQVIAAPPVI-LEQRRQVIVGTWGESLKLPCTAKGTPQ 1871
Query: 126 SSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESD 185
S L DG ++ + K + S+G L I + SD
Sbjct: 1872 PSVYWVLSDGTEVK--------------------PLQFTNSKLFLFSNGTLYIRNLASSD 1911
Query: 186 RYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCS 245
R +Y+C + TG+ R + LT +R+ S + V + ++L CS
Sbjct: 1912 R-GTYECIATSS-TGSE-----RRVVMLTMEERVTSPRIEAASQKRTEVNFGDKLLLNCS 1964
Query: 246 AQGNPLPTIKWYKQDSPVEESDRIQRIGS--------SLSISHVEESDSGVWNCVANNSE 297
A G P P I W V D+ R+GS SL I V E DSGV+ CVA N
Sbjct: 1965 ATGEPKPQIMWRLPSKAV--VDQQHRVGSWIHVYPNGSLFIGSVTEKDSGVYLCVARNKM 2022
Query: 298 GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILP 357
G D LI+ V + K K + + ++L+ K + +
Sbjct: 2023 GDD--------------------LILMHVSLRLKPAKIDHKQYFRKQVLHGKDFQ---VD 2059
Query: 358 CSAQGNPLPTIKY 370
C A G+P+P I +
Sbjct: 2060 CKASGSPVPEISW 2072
Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats.
Identities = 72/321 (22%), Positives = 137/321 (42%), Gaps = 62/321 (19%)
Query: 61 LVLDRVQREDAGMYQCHVSA--DDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHC 118
L + RV+ +D G Y C S D ++ V+ + + ++ V G +EL C
Sbjct: 1708 LSIQRVEIQDRGQYLCSASNLFGTDHLHVTLSVVSYPPRILERRTKEITVHSGSTVELKC 1767
Query: 119 RVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
R + R S W+ +++ +V + Q G Q + G L++
Sbjct: 1768 R-AEGRPSPTVTWIL--------ANQTVVSESSQ----GSRQAVVT-------VDGTLVL 1807
Query: 179 HQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMF--EKHRILNVKK 236
H + DR Y+C N G+ SL ++++A + ++ +++
Sbjct: 1808 HNLSIYDR-GFYKCVASNP----------GGQDSLLVKIQVIAAPPVILEQRRQVIVGTW 1856
Query: 237 DESVILPCSAQGNPLPTIKWYKQD----SPVEESDRIQRIGS--SLSISHVEESDSGVWN 290
ES+ LPC+A+G P P++ W D P++ ++ + S +L I ++ SD G +
Sbjct: 1857 GESLKLPCTAKGTPQPSVYWVLSDGTEVKPLQFTNSKLFLFSNGTLYIRNLASSDRGTYE 1916
Query: 291 CVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKK 350
C+A +S G ++ + ML+ E + + R+ +A++ + V
Sbjct: 1917 CIATSSTGSER----------RVVMLTMEERV------TSPRIEAASQ-----KRTEVNF 1955
Query: 351 DESVILPCSAQGNPLPTIKYR 371
+ ++L CSA G P P I +R
Sbjct: 1956 GDKLLLNCSATGEPKPQIMWR 1976
Score = 58.5 bits (140), Expect = 8e-08, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 36/159 (22%)
Query: 225 MFEKHRIL-------NVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ--RI--- 272
+FEK RI+ + + LPC A GNPLPTI W + S ++ S R Q R+
Sbjct: 1644 IFEKPRIVGGKAASFTIPANSDAFLPCEAVGNPLPTIHWTRVPSGLDLSKRKQNSRVQVL 1703
Query: 273 -GSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNK 331
+LSI VE D G + C A+N G D + + + V
Sbjct: 1704 PNGTLSIQRVEIQDRGQYLCSASNLFGTDHLHVTL------------------SVVSYPP 1745
Query: 332 RLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
R+L + + + V +V L C A+G P PT+ +
Sbjct: 1746 RILE-----RRTKEITVHSGSTVELKCRAEGRPSPTVTW 1779
Score = 52.4 bits (124), Expect = 6e-06, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 43/262 (16%)
Query: 57 SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVIL--GGELVEIASSNQVVVDV-GHR 113
S+ ++ + REDAG Y+C +A + + VIL G + V + + V + G
Sbjct: 2392 SNGSFIISKTTREDAGKYRC--AARNKVGYIEKLVILEIGQKPVILTYAPGTVKGISGES 2449
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSS 173
+ LHC + K + G V+ DR Q +GKY + +
Sbjct: 2450 LSLHCVSDGIPKPNIKWTMPSGYVV----------DRPQI-----------NGKYILHDN 2488
Query: 174 GELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILN 233
G L+I + DR +Y C+ N + G +L++V + + R+ + R +
Sbjct: 2489 GTLVIKEATAYDR-GNYICKAQNSV-GHTLITVPV--MIVAYPPRITNRPP-----RSIV 2539
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS--------LSISHVEESD 285
+ + L C A G P P I W D + + +R S L I + + SD
Sbjct: 2540 TRTGAAFQLHCVALGVPKPEITWEMPDHSLLSTASKERTHGSEQLHLQGTLVIQNPQTSD 2599
Query: 286 SGVWNCVANNSEGQDKMQLFIQ 307
SG++ C A N G D +IQ
Sbjct: 2600 SGIYKCTAKNPLGSDYAATYIQ 2621
Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 83/380 (21%), Positives = 145/380 (38%), Gaps = 63/380 (16%)
Query: 9 SSLSIEMSPSGQVVVDVGHRIELHCRVS--PK-----RLSSAKAWLKD----GLVLRRNS 57
+S IE + + V+ G ++ L+C + PK RL S KA + G +
Sbjct: 1939 TSPRIEAASQKRTEVNFGDKLLLNCSATGEPKPQIMWRLPS-KAVVDQQHRVGSWIHVYP 1997
Query: 58 DEVLVLDRVQREDAGMYQC--HVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIE 115
+ L + V +D+G+Y C DD M + L ++ + V G +
Sbjct: 1998 NGSLFIGSVTEKDSGVYLCVARNKMGDDLILMHVSLRLKPAKIDHKQYFRKQVLHGKDFQ 2057
Query: 116 LHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGE 175
+ C+ S + L DG ++ + +Q +D+G +Y + ++G
Sbjct: 2058 VDCKASGSPVPEISWSLPDG---------TMINNAMQADDSGH-----RTRRYTLFNNGT 2103
Query: 176 LIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILN-- 233
L ++V ++ Y C N L G+ + + +++AA + N
Sbjct: 2104 LYFNKVGVAEE-GDYTCYAQNTL----------GKDEMKVHLTVITAAPRIRQSNKTNKR 2152
Query: 234 VKKDESVILPCSAQGNPLPTIKWY--KQDSPVEESDRIQ-RIGSSLSISHVEESDSGVWN 290
+K ++ +L C G+P P I W D DR SL+I+ V+ DSG +
Sbjct: 2153 IKAGDTAVLDCEVTGDPKPKIFWLLPSNDMISFSIDRYTFHANGSLTINKVKLLDSGEYV 2212
Query: 291 CVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKK 350
CVA N G D K ++S LI + +A + +KH
Sbjct: 2213 CVARNPSGDDTKMY-------KLDVVSKPPLINGLYTNRTVIKATAVRHSKKH------- 2258
Query: 351 DESVILPCSAQGNPLPTIKY 370
C A+G P P + +
Sbjct: 2259 -----FDCRAEGTPSPEVMW 2273
Score = 38.9 bits (89), Expect = 0.056, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
EDG+ + SG+L + D D Y C N A +L+ R+++ E L+ A
Sbjct: 524 EDGRILIDKSGKLELQMADSFDT-GVYHCISSN-YDDADILTY---RITVVEP--LVEAY 576
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWY-KQDSPVEESDRIQRI--GSSLSISH 280
+ H + + E++ LPC + G P +I W ++ + +S R +++ +L I
Sbjct: 577 QENGIHHTVFI--GETLDLPCHSTGIPDASISWVIPGNNVLYQSSRDKKVLNNGTLRILQ 634
Query: 281 VEESDSGVWNCVANNSEGQD 300
V D G + CVA N G D
Sbjct: 635 VTPKDQGYYRCVAANPSGVD 654
Score = 35.8 bits (81), Expect = 0.57, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 239 SVILPCSAQGNPLPTIKWYKQDSP------VEESDRIQRIGS-SLSISHVEESDSGVWNC 291
+V L C QG+P P + W D V E RI S L + + D+GV++C
Sbjct: 492 TVGLNCPGQGDPTPHVDWLLADGSKVRAPYVSEDGRILIDKSGKLELQMADSFDTGVYHC 551
Query: 292 VANNSEGQD 300
+++N + D
Sbjct: 552 ISSNYDDAD 560
Score = 35.4 bits (80), Expect = 0.66, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 111/320 (34%), Gaps = 66/320 (20%)
Query: 61 LVLDRVQREDAGMYQCHV--SADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHC 118
L ++V + G Y C+ + D ++ VI + ++ + G L C
Sbjct: 2104 LYFNKVGVAEEGDYTCYAQNTLGKDEMKVHLTVITAAPRIRQSNKTNKRIKAGDTAVLDC 2163
Query: 119 RVS----PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSG 174
V+ PK WL L N +DR G + K +L SG
Sbjct: 2164 EVTGDPKPKIF-----WL-----LPSNDMISFSIDRYTFHANG----SLTINKVKLLDSG 2209
Query: 175 ELI-IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILN 233
E + + + D + Y+ V+K + L NR + T A + +KH
Sbjct: 2210 EYVCVARNPSGDDTKMYKLDVVSKPPLINGLYTNRTVIKAT-------AVRHSKKH---- 2258
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQD-----SPVEESDRIQRIGSSLSISHVEESDSGV 288
C A+G P P + W D +P S +L I +V SDS
Sbjct: 2259 --------FDCRAEGTPSPEVMWIMPDNIFLTAPYYGSRITVHKNGTLEIRNVRLSDSAD 2310
Query: 289 WNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNV 348
+ CVA N G+ + ++ +V E +R EK +
Sbjct: 2311 FICVARNEGGESVL------------------VVQLEVLEMLRRPTFRNPFNEK---IVA 2349
Query: 349 KKDESVILPCSAQGNPLPTI 368
+ +S L CS GNP P I
Sbjct: 2350 QLGKSTALNCSVDGNPPPEI 2369
Score = 33.5 bits (75), Expect = 2.5, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 79/204 (38%), Gaps = 38/204 (18%)
Query: 173 SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRIL 232
+G L I V SD + C N+ G S+L V +L + E R + F + +
Sbjct: 2295 NGTLEIRNVRLSDS-ADFICVARNE-GGESVLVV---QLEVLEMLRRPTFRNPFNEKIVA 2349
Query: 233 NVKKDESVILPCSAQGNPLPTIKWYK------QDSPVEESDRIQRIGSSLSISHVEESDS 286
+ K S L CS GNP P I W + P I GS + IS D+
Sbjct: 2350 QLGK--STALNCSVDGNPPPEIIWILPNGTRFSNGPQSYQYLIASNGSFI-ISKTTREDA 2406
Query: 287 GVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRIL 346
G + C A N G +I+ +L+I ++ +K L A +
Sbjct: 2407 GKYRCAARNKVG------YIE------------KLVILEIGQKPVILTYAPGTVKG---- 2444
Query: 347 NVKKDESVILPCSAQGNPLPTIKY 370
ES+ L C + G P P IK+
Sbjct: 2445 --ISGESLSLHCVSDGIPKPNIKW 2466
Score = 32.0 bits (71), Expect = 7.7, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 48 KDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQV- 106
+DG +L S + L L D G+Y C S DD+ ++ ++ + LVE N +
Sbjct: 524 EDGRILIDKSGK-LELQMADSFDTGVYHCISSNYDDADILTYRITVVEPLVEAYQENGIH 582
Query: 107 -VVDVGHRIELHCRVSPKRLSSAKAWLKDG-LVLRRNSDEVLVLD-------RVQREDAG 157
V +G ++L C S ++ +W+ G VL ++S + VL+ +V +D G
Sbjct: 583 HTVFIGETLDLPCH-STGIPDASISWVIPGNNVLYQSSRDKKVLNNGTLRILQVTPKDQG 641
Query: 158 MYQC 161
Y+C
Sbjct: 642 YYRC 645
>sp|Q8VHZ8|DSCAM_RAT Down syndrome cell adhesion molecule homolog OS=Rattus norvegicus
GN=Dscam PE=1 SV=1
Length = 2013
Score = 74.7 bits (182), Expect = 1e-12, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 125/295 (42%), Gaps = 64/295 (21%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDGLVLR-----RNSDEVLVLDRVQREDAGMYQCHVSA 80
G R+EL C+ + WLKD + L + + L+++ + D+G Y C VS
Sbjct: 239 GQRVELPCKALGHPEPDYR-WLKDNMPLELSGRFQKTVTGLLIENSRPSDSGSYVCEVSN 297
Query: 81 DDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRR 140
+A++ ++ + L S +V VG ++ L C V+ +W ++G +L
Sbjct: 298 RYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNE-DQELSWYRNGEILNP 356
Query: 141 NSD--------EVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQC 192
+ L++D + + D G YQC + K LS+ + + QV D
Sbjct: 357 GKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDK---LSAQDYV--QVVLED------- 404
Query: 193 RGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLP 252
G K+ A +++++S A E V L C+ +G PLP
Sbjct: 405 -GTPKIISAF-------------SEKVVSPA--------------EPVSLVCNVKGTPLP 436
Query: 253 TIKWYKQDSPVEESD--RIQRIGSS-------LSISHVEESDSGVWNCVANNSEG 298
T+ W D P+ + RI ++ +S L+IS + D GV+ C ANNS G
Sbjct: 437 TVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAG 491
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA 222
+ ++ + S+G L I V D +Y+C ++ TG + S N RL +++ SA
Sbjct: 168 VSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS-NSARLFVSDPAN--SA 224
Query: 223 AKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVE 282
+ + + V LPC A G+P P +W K + P+E S R Q+ + L I +
Sbjct: 225 PSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENSR 284
Query: 283 ESDSGVWNCVANNSEGQDKM 302
SDSG + C +N G K+
Sbjct: 285 PSDSGSYVCEVSNRYGTAKV 304
Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats.
Identities = 82/323 (25%), Positives = 118/323 (36%), Gaps = 67/323 (20%)
Query: 2 QLFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV- 60
Q I V+ SI P + G +HCRV S K W K+ +L N +V
Sbjct: 496 QARINVRGPASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIK-WYKNANLLPFNHRQVA 552
Query: 61 ------LVLDRVQRE-DAGMYQCHVSADDD-SAQMSAQVILGGELVEIASSNQVV----V 108
L L VQ+E D G Y C+V S S V V++ Q
Sbjct: 553 FENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVT-----VKVPPFIQPFEFPRF 607
Query: 109 DVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKY 168
+G R+ + C V L W KDG R G+
Sbjct: 608 SIGQRVFIPCVVVSGDLPITITWQKDG--------------RPIPASLGV---------- 643
Query: 169 HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLL---SAAKM 225
+D D S + ++ + + + R + E++ L K
Sbjct: 644 -----------TIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKF 692
Query: 226 FEKHRILNVKKDESVILPCSAQGNPLPTIKW-------YKQDSPVEESDRIQRIGS-SLS 277
+ R + ++VIL CSA+G P+PTI W Q P+ + RIQ + + SL
Sbjct: 693 VVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLL 752
Query: 278 ISHVEESDSGVWNCVANNSEGQD 300
I HV E DSG + C +N G D
Sbjct: 753 IKHVVEEDSGYYLCKVSNDVGAD 775
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 73/313 (23%), Positives = 117/313 (37%), Gaps = 71/313 (22%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSD------ 58
+ VK L +SP +V VG ++ L C V+ +W ++G +L +
Sbjct: 308 LYVKQPLKATISPR-KVKSSVGSQVSLSCSVTGNE-DQELSWYRNGEILNPGKNVRITGL 365
Query: 59 --EVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASS-NQVVVDVGHRIE 115
L++D + + D G YQC V D SAQ QV+L +I S+ ++ VV +
Sbjct: 366 NHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVS 425
Query: 116 LHCRVSPKRLSSAKAWLKDGLVLRRNSDEV-------------LVLDRVQREDAGMYQCH 162
L C V L + L D +L+ + + L + Q D G+Y+C
Sbjct: 426 LVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCT 485
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVN-RGRLSLTENKRLLS 221
+ S+G ++ YQ R +N RG S+ K + +
Sbjct: 486 ANN------SAGVVL------------YQAR------------INVRGPASIRPMKNITA 515
Query: 222 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDS--PVEESDRIQRIGSSLSIS 279
A + C G P +IKWYK + P +L +S
Sbjct: 516 IA-------------GRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLS 562
Query: 280 HVE-ESDSGVWNC 291
V+ E D G + C
Sbjct: 563 DVQKEVDEGEYTC 575
Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 238 ESVILPCSAQGNPLPTIKWYKQDSPVE-----ESDRIQRIGSSLSISHVEESDSGVWNCV 292
+ ++LPC A G+P P +KW K + + R S I V+ DSG ++CV
Sbjct: 1301 KDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFVIRTVKAEDSGYYSCV 1360
Query: 293 ANNSEGQDKMQLFIQ 307
ANN+ G D++ L +Q
Sbjct: 1361 ANNNWGSDEIILNLQ 1375
Score = 41.2 bits (95), Expect = 0.013, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 99/265 (37%), Gaps = 68/265 (25%)
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHM 170
G R+EL C+ + WLKD + L + G++
Sbjct: 239 GQRVELPCKALGHPEPDYR-WLKDNMPLELS------------------------GRFQK 273
Query: 171 LSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHR 230
+G L+I SD SY C N+ A ++ GRL + K+ L A R
Sbjct: 274 TVTG-LLIENSRPSDS-GSYVCEVSNRYGTAKVI----GRLYV---KQPLKATI---SPR 321
Query: 231 ILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG---SSLSISHVEESDSG 287
+ V L CS GN + WY+ + ++ G ++L + H+ +SD G
Sbjct: 322 KVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGG 381
Query: 288 VWNCVANNSE--GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRI 345
+ C + QD +Q+ ++ K II EK ++S A
Sbjct: 382 AYQCFVRKDKLSAQDYVQVVLEDGTPK---------IISAFSEK---VVSPA-------- 421
Query: 346 LNVKKDESVILPCSAQGNPLPTIKY 370
E V L C+ +G PLPT+ +
Sbjct: 422 ------EPVSLVCNVKGTPLPTVTW 440
Score = 36.6 bits (83), Expect = 0.35, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 33/160 (20%)
Query: 165 DGKYHMLSSGELII-HQVDESDRYRSYQCRGVNKL----TGASLLSVN-RGRLSLTENKR 218
+G+ +LS+G L+I H V+E Y Y C+ N + + + L+V ++ N
Sbjct: 740 NGRIQVLSNGSLLIKHVVEEDSGY--YLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTT 797
Query: 219 LLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQD---SP------VEESDRI 269
L + + E + C+A G ++W K+D +P V +
Sbjct: 798 LATQGQRKE--------------MSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTKEVG 843
Query: 270 QRIGSSLSISHVEESDSGVWNCVANNSEGQDK--MQLFIQ 307
+ + S+L I DSG ++C A NS G+D+ +QL +Q
Sbjct: 844 EEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQ 883
>sp|Q9ERC8|DSCAM_MOUSE Down syndrome cell adhesion molecule homolog OS=Mus musculus
GN=Dscam PE=1 SV=1
Length = 2013
Score = 74.7 bits (182), Expect = 1e-12, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 125/295 (42%), Gaps = 64/295 (21%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDGLVLR-----RNSDEVLVLDRVQREDAGMYQCHVSA 80
G R+EL C+ + WLKD + L + + L+++ + D+G Y C VS
Sbjct: 239 GQRVELPCKALGHPEPDYR-WLKDNMPLELSGRFQKTVTGLLIENSRPSDSGSYVCEVSN 297
Query: 81 DDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRR 140
+A++ ++ + L S +V VG ++ L C V+ +W ++G +L
Sbjct: 298 RYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNE-DQELSWYRNGEILNP 356
Query: 141 NSD--------EVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQC 192
+ L++D + + D G YQC + K LS+ + + QV D
Sbjct: 357 GKNVRITGLNHANLIMDHMVKSDGGAYQCFVRKDK---LSAQDYV--QVVLED------- 404
Query: 193 RGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLP 252
G K+ A +++++S A E V L C+ +G PLP
Sbjct: 405 -GTPKIISAF-------------SEKVVSPA--------------EPVSLVCNVKGTPLP 436
Query: 253 TIKWYKQDSPVEESD--RIQRIGSS-------LSISHVEESDSGVWNCVANNSEG 298
T+ W D P+ + RI ++ +S L+IS + D GV+ C ANNS G
Sbjct: 437 TVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAG 491
Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA 222
+ ++ + S+G L I V D +Y+C ++ TG + S N RL +++ SA
Sbjct: 168 VSGSRFLITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQS-NSARLFVSDPAN--SA 224
Query: 223 AKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVE 282
+ + + V LPC A G+P P +W K + P+E S R Q+ + L I +
Sbjct: 225 PSILDGFDHRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENSR 284
Query: 283 ESDSGVWNCVANNSEGQDKM 302
SDSG + C +N G K+
Sbjct: 285 PSDSGSYVCEVSNRYGTAKV 304
Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats.
Identities = 82/323 (25%), Positives = 118/323 (36%), Gaps = 67/323 (20%)
Query: 2 QLFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV- 60
Q I V+ SI P + G +HCRV S K W K+ +L N +V
Sbjct: 496 QARINVRGPASIR--PMKNITAIAGRDTYIHCRVIGYPYYSIK-WYKNANLLPFNHRQVA 552
Query: 61 ------LVLDRVQRE-DAGMYQCHVSADDD-SAQMSAQVILGGELVEIASSNQVV----V 108
L L VQ+E D G Y C+V S S V V++ Q
Sbjct: 553 FENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVT-----VKVPPFIQPFEFPRF 607
Query: 109 DVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKY 168
+G R+ + C V L W KDG R G+
Sbjct: 608 SIGQRVFIPCVVVSGDLPITITWQKDG--------------RPIPASLGV---------- 643
Query: 169 HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLL---SAAKM 225
+D D S + ++ + + + R + E++ L K
Sbjct: 644 -----------TIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKF 692
Query: 226 FEKHRILNVKKDESVILPCSAQGNPLPTIKW-------YKQDSPVEESDRIQRIGS-SLS 277
+ R + ++VIL CSA+G P+PTI W Q P+ + RIQ + + SL
Sbjct: 693 VVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLL 752
Query: 278 ISHVEESDSGVWNCVANNSEGQD 300
I HV E DSG + C +N G D
Sbjct: 753 IKHVVEEDSGYYLCKVSNDVGAD 775
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 73/313 (23%), Positives = 117/313 (37%), Gaps = 71/313 (22%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSD------ 58
+ VK L +SP +V VG ++ L C V+ +W ++G +L +
Sbjct: 308 LYVKQPLKATISPR-KVKSSVGSQVSLSCSVTGNE-DQELSWYRNGEILNPGKNVRITGL 365
Query: 59 --EVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASS-NQVVVDVGHRIE 115
L++D + + D G YQC V D SAQ QV+L +I S+ ++ VV +
Sbjct: 366 NHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVS 425
Query: 116 LHCRVSPKRLSSAKAWLKDGLVLRRNSDEV-------------LVLDRVQREDAGMYQCH 162
L C V L + L D +L+ + + L + Q D G+Y+C
Sbjct: 426 LVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCT 485
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVN-RGRLSLTENKRLLS 221
+ S+G ++ YQ R +N RG S+ K + +
Sbjct: 486 ANN------SAGVVL------------YQAR------------INVRGPASIRPMKNITA 515
Query: 222 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDS--PVEESDRIQRIGSSLSIS 279
A + C G P +IKWYK + P +L +S
Sbjct: 516 IA-------------GRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLS 562
Query: 280 HVE-ESDSGVWNC 291
V+ E D G + C
Sbjct: 563 DVQKEVDEGEYTC 575
Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 238 ESVILPCSAQGNPLPTIKWYKQDSPVE-----ESDRIQRIGSSLSISHVEESDSGVWNCV 292
+ ++LPC A G+P P +KW K + + R S I V+ DSG ++CV
Sbjct: 1301 KDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCV 1360
Query: 293 ANNSEGQDKMQLFIQ 307
ANN+ G D++ L +Q
Sbjct: 1361 ANNNWGSDEIILNLQ 1375
Score = 41.2 bits (95), Expect = 0.013, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 99/265 (37%), Gaps = 68/265 (25%)
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHM 170
G R+EL C+ + WLKD + L + G++
Sbjct: 239 GQRVELPCKALGHPEPDYR-WLKDNMPLELS------------------------GRFQK 273
Query: 171 LSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHR 230
+G L+I SD SY C N+ A ++ GRL + K+ L A R
Sbjct: 274 TVTG-LLIENSRPSDS-GSYVCEVSNRYGTAKVI----GRLYV---KQPLKATI---SPR 321
Query: 231 ILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG---SSLSISHVEESDSG 287
+ V L CS GN + WY+ + ++ G ++L + H+ +SD G
Sbjct: 322 KVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGG 381
Query: 288 VWNCVANNSE--GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRI 345
+ C + QD +Q+ ++ K II EK ++S A
Sbjct: 382 AYQCFVRKDKLSAQDYVQVVLEDGTPK---------IISAFSEK---VVSPA-------- 421
Query: 346 LNVKKDESVILPCSAQGNPLPTIKY 370
E V L C+ +G PLPT+ +
Sbjct: 422 ------EPVSLVCNVKGTPLPTVTW 440
Score = 36.6 bits (83), Expect = 0.35, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 33/160 (20%)
Query: 165 DGKYHMLSSGELII-HQVDESDRYRSYQCRGVNKL----TGASLLSVN-RGRLSLTENKR 218
+G+ +LS+G L+I H V+E Y Y C+ N + + + L+V ++ N
Sbjct: 740 NGRIQVLSNGSLLIKHVVEEDSGY--YLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTT 797
Query: 219 LLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQD---SP------VEESDRI 269
L + + E + C+A G ++W K+D +P V +
Sbjct: 798 LATQGQRKE--------------MSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTKEVG 843
Query: 270 QRIGSSLSISHVEESDSGVWNCVANNSEGQDK--MQLFIQ 307
+ + S+L I DSG ++C A NS G+D+ +QL +Q
Sbjct: 844 EEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQ 883
>sp|Q9P232|CNTN3_HUMAN Contactin-3 OS=Homo sapiens GN=CNTN3 PE=1 SV=3
Length = 1028
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 145/360 (40%), Gaps = 93/360 (25%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDGLVLR-----RNSDEVLVLDRVQREDAGMYQCHVSA 80
G ++L C + DGL R VL + Q+EDAG Y+C A
Sbjct: 242 GSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYEC--IA 299
Query: 81 DDDSAQMSAQVILGGELVEIASSN--QVVVDVGHRIE----LHCRVSPKRLSSAKAWLKD 134
++ + A+ G L A + Q++ DV +E CR S K S + WLK+
Sbjct: 300 ENSRGKNVAR----GRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYR-WLKN 354
Query: 135 G--LVLRRNS---DEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRS 189
G LVL + + L + + D+GM+QC E+ + SS EL
Sbjct: 355 GAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAEL------------- 401
Query: 190 YQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH---RILNVKKDESVILPCSA 246
+++++A F K+ +++ V+ V L C
Sbjct: 402 ----------------------------KVVASAPDFSKNPMKKLVQVQVGSLVSLDCKP 433
Query: 247 QGNPLPTIKWYKQDSPVEESDRIQRIG-SSLSISHVEESDSGVWNCVANNSEGQDKMQLF 305
+ +P W K D V+E +RI + L I++V ++D+G + C+A N G+
Sbjct: 434 RASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGK------ 487
Query: 306 IQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPL 365
A+G H++ V E + L+ + M +V ESVILPC Q +PL
Sbjct: 488 ---ANGTTHLV---------VTEPTRITLAPSNM-------DVSVGESVILPCQVQHDPL 528
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 73/262 (27%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRV 120
L + +V+ D G Y C V++ +A+ +LG + S+ V+ + +IE+
Sbjct: 181 LYISKVEPSDVGNYTCVVTSMVTNAR-----VLGSPTPLVLRSDGVMGEYEPKIEVQF-- 233
Query: 121 SPKRLSSAKA------------------WLK-DGLVLR-----RNSDEVLVLDRVQREDA 156
P+ L +AK W + DGL R VL + Q+EDA
Sbjct: 234 -PETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDA 292
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
G Y+C E+ RG N V RGRL+
Sbjct: 293 GSYECIAEN--------------------------SRGKN---------VARGRLTYYAK 317
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSL 276
+ K E + ++S+ C A G P P+ +W K + + +R Q +L
Sbjct: 318 PHWVQLIKDVE------IAVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGAL 371
Query: 277 SISHVEESDSGVWNCVANNSEG 298
+IS++ +DSG++ C+A N G
Sbjct: 372 TISNLSVTDSGMFQCIAENKHG 393
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 123/324 (37%), Gaps = 57/324 (17%)
Query: 54 RRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDV--G 111
+ N ++V++ + D G YQC + + + L + + V V G
Sbjct: 78 KLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREG 137
Query: 112 HRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHML 171
+ L C P + AW+ + Y +E+ +
Sbjct: 138 QGVVLLCGPPPHSGELSYAWIFN-----------------------EYPSFVEEDSRRFV 174
Query: 172 S--SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH 229
S +G L I +V+ SD +Y C + +T A +L + L L + + E
Sbjct: 175 SQETGHLYISKVEPSD-VGNYTCVVTSMVTNARVLG-SPTPLVLRSDGVMGEYEPKIEVQ 232
Query: 230 --RILNVKKDESVILPCSAQGNPLPTIKWYKQDS-PVEESDRIQRIGSSLSISHVEESDS 286
L K +V L C A GNP+P I W + D P ++++ L I + ++ D+
Sbjct: 233 FPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDA 292
Query: 287 GVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRIL 346
G + C+A NS G++ + + Y + K H + +I V+
Sbjct: 293 GSYECIAENSRGKNVARGRLTY-YAKPHWVQ----LIKDVE------------------- 328
Query: 347 NVKKDESVILPCSAQGNPLPTIKY 370
+ ++S+ C A G P P+ ++
Sbjct: 329 -IAVEDSLYWECRASGKPKPSYRW 351
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 21 VVVDVGHRIELHC--RVSPKRLSSAKAWLKDGLVLRRN------SDEVLVLDRVQREDAG 72
V V VG + L C R SP+ LSS W K + ++ + +D L + V + DAG
Sbjct: 419 VQVQVGSLVSLDCKPRASPRALSS---WKKGDVSVQEHERISLLNDGGLKIANVTKADAG 475
Query: 73 MYQCHVSADDDSAQMSAQVILGGEL-VEIASSNQVVVDVGHRIELHCRVSPKRL------ 125
Y C A + +++ + +A SN + V VG + L C+V L
Sbjct: 476 TYTCMAENQFGKANGTTHLVVTEPTRITLAPSN-MDVSVGESVILPCQVQHDPLLDIIFT 534
Query: 126 ----SSAKAWLKDGLVLRR---NSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+ + KDG + +S L++ +Q + +G Y C ++ G + S+ +LI+
Sbjct: 535 WYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIV 594
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVEES--DRIQRIGSSLSISHVEES-DSGVWNCV 292
+D+ + L C A+GNP P +W S ++ S R + G +L + + + D+G + C
Sbjct: 42 EDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 293 ANNSEG 298
A NS G
Sbjct: 102 ATNSLG 107
>sp|P97527|CNTN5_RAT Contactin-5 OS=Rattus norvegicus GN=Cntn5 PE=1 SV=1
Length = 1099
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 163/423 (38%), Gaps = 103/423 (24%)
Query: 28 RIELHCRVSPKRLSSAKAWLKDGLVLRRNSD--------EVLVLDRVQREDAGMYQCHVS 79
++ L+C V S WL++G + SD ++ + + D+G+YQC +
Sbjct: 118 KVALNCEVR-GNPSPTYRWLRNGTEIDLESDYRYSMIDGTFIINNPSESRDSGLYQCLAT 176
Query: 80 ADDDSAQMSAQVILGGELVEIASSNQVVVDV--GHRIELHCRVSPKRLSSAKAWLKDGLV 137
S + L + + V V G + L C P +W+
Sbjct: 177 NTFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWV----- 231
Query: 138 LRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNK 197
N V + +R + +G L I +V SD SY C N
Sbjct: 232 --FNEFPSFVAEDSRR--------------FISQETGNLYISKVQTSD-VGSYICLVKNA 274
Query: 198 LTGASLLSVNRGRLSLTENKRLLSAAKMFEKH--RILNVKKDESVILPCSAQGNPLPTIK 255
+T A +LS L+L + + E H + K +V + C A GNP+PTI
Sbjct: 275 VTNARVLSPPT-PLTLRNDGVMGEYEPKIEVHFPTTVTAAKGTTVKMECFALGNPVPTIT 333
Query: 256 WYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQD----KMQLF------ 305
W K + + R+++ + L I +++ D+G++ C A NS G++ ++Q++
Sbjct: 334 WMKVNGYIPSKSRLRKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWV 393
Query: 306 -------------IQY---AHGK----YHMLSSGE--------------LIIHQVDE--- 328
+Q+ A GK Y L +G L IH V++
Sbjct: 394 QKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGAPLLPQSRVDTANGVLAIHSVNQSDA 453
Query: 329 -------KNK----------RLLSAAKMFEKHRI---LNVKKDESVILPCSAQGNPLPTI 368
+NK ++L++ FE +++ + V KD V++ C QG+P P I
Sbjct: 454 GMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDREVLIECKPQGSPKPAI 513
Query: 369 KYR 371
+R
Sbjct: 514 SWR 516
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 41/252 (16%)
Query: 55 RNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRI 114
R S VL + +Q +DAG+Y+C Q+ + + N +D G +
Sbjct: 348 RKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKLNDTQLDSGSPL 407
Query: 115 ELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSG 174
+ C+ + K + + WLK+G L L RV ++G
Sbjct: 408 QWECKATGKPRPTYR-WLKNGAPL-------LPQSRVD------------------TANG 441
Query: 175 ELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRI--- 231
L IH V++SD YQC NK G + + ++L++ FE +++
Sbjct: 442 VLAIHSVNQSDA-GMYQCLAENKY----------GAIYASAELKILASPPSFELNQVKKS 490
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG-SSLSISHVEESDSGVWN 290
+ V KD V++ C QG+P P I W K D V + RI + SL I + ++D G +
Sbjct: 491 IIVTKDREVLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDGSLRILNASKADEGKYI 550
Query: 291 CVANNSEGQDKM 302
C N G ++
Sbjct: 551 CQGVNIFGSAEI 562
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 231 ILNVKKDES-VILPCSAQGNPLPTIKWYKQDSPVE-ESD-RIQRIGSSLSISHVEES-DS 286
I DE V L C +GNP PT +W + + ++ ESD R I + I++ ES DS
Sbjct: 109 IFPTDSDEKKVALNCEVRGNPSPTYRWLRNGTEIDLESDYRYSMIDGTFIINNPSESRDS 168
Query: 287 GVWNCVANNSEG 298
G++ C+A N+ G
Sbjct: 169 GLYQCLATNTFG 180
>sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2
Length = 5635
Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats.
Identities = 92/379 (24%), Positives = 148/379 (39%), Gaps = 95/379 (25%)
Query: 16 SPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSD-------EVLVLDRVQR 68
+P + VV + H + L C+ + S WLKDG+ ++ N + + L + Q
Sbjct: 1647 TPLNKQVV-IAHSLTLECKAAGNP-SPILTWLKDGVPVKANDNIRIEAGGKKLEIMSAQE 1704
Query: 69 EDAGMYQCHVSADDDSAQMSAQV-------ILGGELVEIASSNQVVVDVGHRIELHCRVS 121
D G Y C ++ ++ +V I GG+ ++ +V V + +EL C V+
Sbjct: 1705 IDRGQYICVATSVAGEKEIKYEVDVLVPPAIEGGD-----ETSYFIVMVNNLLELDCHVT 1759
Query: 122 PKRLSSAKAWLKDG-LVLRRNSDEVL------VLDRVQREDAGMYQCHIEDGKYHMLSSG 174
+ WLKDG L+ R+ ++L V+ + Q + G+Y+C +
Sbjct: 1760 GSPPPTI-MWLKDGQLIDERDGFKILLNGRKLVIAQAQVSNTGLYRCMAANTAGDHKKEF 1818
Query: 175 ELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNV 234
E+ +H V +S LS R+ V
Sbjct: 1819 EVTVH---------------VPPTIKSSGLS-----------------------ERV--V 1838
Query: 235 KKDESVILPCSAQGNPLPTIKWYKQDSPVEESD---RIQRIGSSLSISHVEESDSGVWNC 291
K + V L C A G P P+I W K D PV + +IQ G L I+ D+G + C
Sbjct: 1839 VKYKPVALQCIANGIPNPSITWLKDDQPVNTAQGNLKIQSSGRVLQIAKTLLEDAGRYTC 1898
Query: 292 VANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKD 351
VA N+ G+ + + +L +H+ L A KM + V
Sbjct: 1899 VATNAAGETQQHI---------------QLHVHE----PPSLEDAGKMLNE----TVLVS 1935
Query: 352 ESVILPCSAQGNPLPTIKY 370
V L C A GNP+P I +
Sbjct: 1936 NPVQLECKAAGNPVPVITW 1954
Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats.
Identities = 93/374 (24%), Positives = 152/374 (40%), Gaps = 85/374 (22%)
Query: 18 SGQVVVDVGHRIELHCRVS---PKRLSSAKAWLKDGLVLRRNSDEVLV-------LDRVQ 67
S + V V + I L C VS P LS WLK+ ++ N++ ++V + R +
Sbjct: 2971 SENLTVVVNNFISLTCEVSGFPPPDLS----WLKNEQPIKLNTNTLIVPGGRTLQIIRAK 3026
Query: 68 REDAGMYQCHV--SADDDSAQMSAQVILGGELVEIASSNQVVVDV--GHRIELHCR---V 120
D G Y C A + + S V + + + S + VV+V G + L C V
Sbjct: 3027 VSDGGEYTCIAINQAGESKKKFSLTVYVPPSIKDHDSESLSVVNVREGTSVSLECESNAV 3086
Query: 121 SPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQ 180
P ++ W K+G ++ ++ H+E +L+ G+++ +
Sbjct: 3087 PPPVIT----WYKNGRMITEST-------------------HVE-----ILADGQMLHIK 3118
Query: 181 VDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESV 240
E Y CR +N R + N + + + E+ I+ + V
Sbjct: 3119 KAEVSDTGQYVCRAIN--------VAGRDDKNFHLNVYVPPSIEGPEREVIVETISN-PV 3169
Query: 241 ILPCSAQGNPLPTIKWYKQDSPVEESD----RIQRIGSSLSISHVEESDSGVWNCVANNS 296
L C A G P PTI W K +E SD RI GS L I+ + SDSG + C+A+N
Sbjct: 3170 TLTCDATGIPPPTIAWLKNHKRIENSDSLEVRILSGGSKLQIARSQHSDSGNYTCIASNM 3229
Query: 297 EGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVIL 356
EG+ + KY+ LS ++ + E ++V E+V L
Sbjct: 3230 EGKAQ----------KYYFLSI-------------QVPPSVAGAEIPSDVSVLLGENVEL 3266
Query: 357 PCSAQGNPLPTIKY 370
C+A G P P I++
Sbjct: 3267 VCNANGIPTPLIQW 3280
Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats.
Identities = 95/373 (25%), Positives = 148/373 (39%), Gaps = 75/373 (20%)
Query: 13 IEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRN------SDEVLVLDRV 66
I +SPS V++ G ++ L C + + W+K+ +L +N SD L ++RV
Sbjct: 892 IGISPSVANVIE-GQQLTLPCTLLAGNPIPERRWIKNSAMLLQNPYITVRSDGSLHIERV 950
Query: 67 QREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDV-GHRIELHCRVS--PK 123
Q +D G Y C S + + V++ L I Q++ + G + L C+ S PK
Sbjct: 951 QLQDGGEYTCVASNVAGTNNKTTSVVVH-VLPTIQHGQQILSTIEGIPVTLPCKASGNPK 1009
Query: 124 RLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDE 183
+ W K G ++ +S + AG DG +++S G
Sbjct: 1010 ---PSVIWSKKGELISTSSAKF---------SAG------ADGSLYVVSPG--------- 1042
Query: 184 SDRYRSYQCRGVNKLTGASLLSVNRG---RLSLTENKRLLSAAKMFEKHRILNVKKDESV 240
+ Y C N G + V R + ++R LS K E ++V E V
Sbjct: 1043 GEESGEYVCTATNT-AGYAKRKVQLTVYVRPRVFGDQRGLSQDKPVE----ISVLAGEEV 1097
Query: 241 ILPCSAQGNPLPTIKWYKQD---SPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSE 297
LPC + P P I W K+ SP GS + I+ SDSG++ CVA N
Sbjct: 1098 TLPCEVKSLPPPIITWAKETQLISPFSPRHTFLPSGS-MKITETRTSDSGMYLCVATNIA 1156
Query: 298 GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILP 357
G + Q + N + + KH L V+ + V +P
Sbjct: 1157 GN-----------------------VTQAVKLNVHVPPKIQRGPKH--LKVQVGQRVDIP 1191
Query: 358 CSAQGNPLPTIKY 370
C+AQG PLP I +
Sbjct: 1192 CNAQGTPLPVITW 1204
Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats.
Identities = 87/370 (23%), Positives = 136/370 (36%), Gaps = 82/370 (22%)
Query: 20 QVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQ--------REDA 71
+V V + + L C+V W KDG L V +LDR Q R D
Sbjct: 1462 EVSVVLNRDVALECQVKGTPFPDIH-WFKDGKPLFLGDPNVELLDRGQVLHLKNARRNDK 1520
Query: 72 GMYQCHVS--ADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAK 129
G YQC VS A + + + + + + + V + I+L C + A
Sbjct: 1521 GRYQCTVSNAAGKQAKDIKLTIYIPPSIKGGNVTTDISVLINSLIKLECETRGLPMP-AI 1579
Query: 130 AWLKDGLVLRRNSDEVLV-------LDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVD 182
W KDG + +S + + + R Q D+ Y CH+ + + + E H
Sbjct: 1580 TWYKDGQPIMSSSQALYIDKGQYLHIPRAQVSDSATYTCHVAN----VAGTAEKSFH--- 1632
Query: 183 ESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVIL 242
D Y + + G L+ NK+++ A S+ L
Sbjct: 1633 -VDVY---------------VPPMIEGNLATPLNKQVVIA---------------HSLTL 1661
Query: 243 PCSAQGNPLPTIKWYKQDSPVEESD--RIQRIGSSLSISHVEESDSGVWNCVANNSEGQD 300
C A GNP P + W K PV+ +D RI+ G L I +E D G + CVA + G+
Sbjct: 1662 ECKAAGNPSPILTWLKDGVPVKANDNIRIEAGGKKLEIMSAQEIDRGQYICVATSVAGEK 1721
Query: 301 KMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSA 360
++ KY + I DE + ++ + E L C
Sbjct: 1722 EI---------KYEVDVLVPPAIEGGDETSYFIVMVNNLLE--------------LDCHV 1758
Query: 361 QGNPLPTIKY 370
G+P PTI +
Sbjct: 1759 TGSPPPTIMW 1768
Score = 66.2 bits (160), Expect = 3e-10, Method: Composition-based stats.
Identities = 74/320 (23%), Positives = 128/320 (40%), Gaps = 80/320 (25%)
Query: 61 LVLDRVQREDAGMYQC--HVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHC 118
L+L+ V ED+G Y C + +A +D+ +S V + E+ V ++ G ++ L C
Sbjct: 4224 LILENVVLEDSGFYTCVANNAAGEDTHTVSLTVHVLPTFTELPGD--VSLNKGEQLRLSC 4281
Query: 119 RVSPKRLSSAKAWLKDGLVLRRNSDEV-----LVLDRVQREDAGMYQCHIEDGKYHMLSS 173
+ + L W + ++ + D V LV++RV +ED+G Y C E+ + +
Sbjct: 4282 KATGIPLPKL-TWTFNNNIIPAHFDSVNGHSELVIERVSKEDSGTYVCTAENSVGFVKAI 4340
Query: 174 GELIIHQ--VDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRI 231
G + + + V + D Y + L G
Sbjct: 4341 GFVYVKEPPVFKGD----YPSNWIEPLGG------------------------------- 4365
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-SLSISHVEESDSGVWN 290
+ IL C +G+P PTI+W ++ +E S RI+++G+ SL+I D+G +
Sbjct: 4366 -------NAILNCEVKGDPTPTIQWNRKGVDIEISHRIRQLGNGSLAIYGTVNEDAGDYT 4418
Query: 291 CVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKK 350
CVA N G + + + L E +I+ + K
Sbjct: 4419 CVATNEAGVVERSMSLTLQSPPIITLEPVETVIN----------AGGK------------ 4456
Query: 351 DESVILPCSAQGNPLPTIKY 370
+IL C A G P PTI +
Sbjct: 4457 ---IILNCQATGEPQPTITW 4473
Score = 65.1 bits (157), Expect = 7e-10, Method: Composition-based stats.
Identities = 79/312 (25%), Positives = 128/312 (41%), Gaps = 66/312 (21%)
Query: 67 QREDAGMYQCHVS--ADDDSAQMSAQVILGGELVEIAS-SNQVVVDVGHRIELHCRVS-- 121
++ DA +Y C S A + + QV + + S +++V G I L C V
Sbjct: 2260 EKSDAALYSCVASNVAGTAKKEYNLQVYIRPTITNSGSHPTEIIVTRGKSISLECEVQGI 2319
Query: 122 -PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQ 180
P ++ W+KDG L + + V +LD + HI L +
Sbjct: 2320 PPPTVT----WMKDGHPLIK-AKGVEILD----------EGHI------------LQLKN 2352
Query: 181 VDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESV 240
+ SD R Y C VN + ++ + LS+ ++ + E ++V + SV
Sbjct: 2353 IHVSDTGR-YVCVAVN----VAGMTDKKYDLSVHAPPSIIGNHRSPEN---ISVVEKNSV 2404
Query: 241 ILPCSAQGNPLPTIKWYKQDSPVEESD--RIQRIGSSLSISHVEESDSGVWNCVANNSEG 298
L C A G PLP+I W+K PV S+ RI G L + D+G + CV N+ G
Sbjct: 2405 SLTCEASGIPLPSITWFKDGWPVSLSNSVRILSGGRMLRLMQTTMEDAGQYTCVVRNAAG 2464
Query: 299 QDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPC 358
+++ ++F H++ GE + V VK+ +SV L C
Sbjct: 2465 EER-KIFGLSVLVPPHIV--GENTLEDV--------------------KVKEKQSVTLTC 2501
Query: 359 SAQGNPLPTIKY 370
GNP+P I +
Sbjct: 2502 EVTGNPVPEITW 2513
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 26/146 (17%)
Query: 228 KHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSP--VEESDRIQRIGSSLSISHVEESD 285
KH L V+ + V +PC+AQG PLP I W K S V+ + +LSI SD
Sbjct: 1178 KH--LKVQVGQRVDIPCNAQGTPLPVITWSKGGSTMLVDGEHHVSNPDGTLSIDQATPSD 1235
Query: 286 SGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIH-QVDEKNKRLLSAAKMFEKHR 344
+G++ CVA N G D+ E+ +H Q + L + R
Sbjct: 1236 AGIYTCVATNIAGTDET-----------------EITLHVQEPPTVEDLEPPYNTTFQER 1278
Query: 345 ILNVKKDESVILPCSAQGNPLPTIKY 370
+ N + + PC A+G P PTIK+
Sbjct: 1279 VAN----QRIEFPCPAKGTPKPTIKW 1300
Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats.
Identities = 81/325 (24%), Positives = 129/325 (39%), Gaps = 78/325 (24%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVS---PKRLSSAKAWLKDGLVLRR---- 55
L + ++ +++ S +++V G I L C V P ++ W+KDG L +
Sbjct: 2284 LQVYIRPTITNSGSHPTEIIVTRGKSISLECEVQGIPPPTVT----WMKDGHPLIKAKGV 2339
Query: 56 ---NSDEVLVLDRVQREDAGMYQC---HVSA-DDDSAQMSAQV---ILGGELVEIASSNQ 105
+ +L L + D G Y C +V+ D +S I+G S
Sbjct: 2340 EILDEGHILQLKNIHVSDTGRYVCVAVNVAGMTDKKYDLSVHAPPSIIGNH----RSPEN 2395
Query: 106 VVVDVGHRIELHCRVSPKRLSSAKAWLKDGL-VLRRNSDEVLVLDRVQR------EDAGM 158
+ V + + L C S L S W KDG V NS +L R+ R EDAG
Sbjct: 2396 ISVVEKNSVSLTCEASGIPLPSI-TWFKDGWPVSLSNSVRILSGGRMLRLMQTTMEDAGQ 2454
Query: 159 YQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNR--GRLSLTEN 216
Y C + + ++GE K+ G S+L G +L +
Sbjct: 2455 YTCVVRN------AAGE-------------------ERKIFGLSVLVPPHIVGENTLEDV 2489
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GS 274
K VK+ +SV L C GNP+P I W+K P++E + I G
Sbjct: 2490 K----------------VKEKQSVTLTCEVTGNPVPEITWHKDGQPLQEDEAHHIISGGR 2533
Query: 275 SLSISHVEESDSGVWNCVANNSEGQ 299
L I++V+ +G + C+A++ G
Sbjct: 2534 FLQITNVQVPHTGRYTCLASSPAGH 2558
Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats.
Identities = 80/317 (25%), Positives = 123/317 (38%), Gaps = 73/317 (23%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSN--QVVVDVGHRIELHC 118
L + R REDAG Y C A + + ++ L ++ + S + + V+ V I L C
Sbjct: 4043 LQISRAVREDAGTYMC--VAQNPAGTALGKIKLNVQVPPVISPHLKEYVIAVDKPITLSC 4100
Query: 119 R---VSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGE 175
+ P ++ W KDG + +E + +LSSG
Sbjct: 4101 EADGLPPPDIT----WHKDGRAI------------------------VESIRQRVLSSGS 4132
Query: 176 LIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVK 235
L I V D Y C N + G+S S +L++ R+ S E H +N
Sbjct: 4133 LQIAFVQPGDA-GHYTCMAAN-VAGSSSTST---KLTVHVPPRIRST----EGHYTVN-- 4181
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVEE--SDRIQRIGSSLSISHVEESDSGVWNCVA 293
++ ILPC A G P P I W K + + L + +V DSG + CVA
Sbjct: 4182 ENSQAILPCVADGIPTPAINWKKDNVLLANLLGKYTAEPYGELILENVVLEDSGFYTCVA 4241
Query: 294 NNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDES 353
NN+ G+D H +S L +H + E +++ K E
Sbjct: 4242 NNAAGEDT------------HTVS---LTVHVL----------PTFTELPGDVSLNKGEQ 4276
Query: 354 VILPCSAQGNPLPTIKY 370
+ L C A G PLP + +
Sbjct: 4277 LRLSCKATGIPLPKLTW 4293
Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats.
Identities = 88/368 (23%), Positives = 142/368 (38%), Gaps = 83/368 (22%)
Query: 23 VDVGHRIELHCRVS---PKRLSSAKAWLKDGLVLRRNSDEVLVLD--------RVQREDA 71
V + + I L+C + P L+ W KDG L +SD+VL+L R + EDA
Sbjct: 2789 VIINNPISLYCETNAAPPPTLT----WYKDGHPLT-SSDKVLILPGGRVLQIPRAKVEDA 2843
Query: 72 GMYQCHV--SADDDSAQMSAQV----ILGGELVEIASSNQVVVDVGHRIELHCRVSPKRL 125
G Y C A +DS Q +V I+ G ++ V+V+ IE SP
Sbjct: 2844 GRYTCVAVNEAGEDSLQYDVRVLVPPIIKGANSDLPEEVTVLVNKSALIECLSSGSP--- 2900
Query: 126 SSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELI-IHQVDES 184
+ +W KDG Q +ED + LS+G ++ I +
Sbjct: 2901 APRNSWQKDG------------------------QPLLEDDHHKFLSNGRILQILNTQIT 2936
Query: 185 DRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPC 244
D R Y C N A + +L + + + + K L V + + L C
Sbjct: 2937 DIGR-YVCVAENTAGSA------KKYFNLNVH---VPPSVIGPKSENLTVVVNNFISLTC 2986
Query: 245 SAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSGVWNCVANNSEGQDKM 302
G P P + W K + P++ + + G +L I + SD G + C+A N G+ K
Sbjct: 2987 EVSGFPPPDLSWLKNEQPIKLNTNTLIVPGGRTLQIIRAKVSDGGEYTCIAINQAGESKK 3046
Query: 303 QLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQG 362
+ S + + + + LS ++NV++ SV L C +
Sbjct: 3047 K------------FSLTVYVPPSIKDHDSESLS---------VVNVREGTSVSLECESNA 3085
Query: 363 NPLPTIKY 370
P P I +
Sbjct: 3086 VPPPVITW 3093
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 107/280 (38%), Gaps = 50/280 (17%)
Query: 46 WLKDGLVLRRNSD-------EVLVLDRVQREDAGMYQCHVSADDDSAQMSAQ-------- 90
W KDG L N + L + Q ++AG Y C A +++ +M
Sbjct: 2609 WFKDGTPLESNRNIRILPGGRTLQILNAQEDNAGRYSC--VATNEAGEMIKHYEVKVYIP 2666
Query: 91 -VILGGELVEIA-SSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVL 148
+I G+L S +V + V + + L C S++ +W KDG L+ +
Sbjct: 2667 PIINKGDLWGPGLSPKEVKIKVNNTLTLECEAYAIP-SASLSWYKDGQPLKSD------- 2718
Query: 149 DRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNR 208
D V G H L E Q+ ++ RY C N + G L +
Sbjct: 2719 DHVNIAANG-----------HTLQIKEA---QISDTGRY---TCVASN-IAGEDELDFDV 2760
Query: 209 GRLSLTENKRLLSAAKMFEKHRILNVKK---DESVILPCSAQGNPLPTIKWYKQDSPVEE 265
++L M + R K + + L C P PT+ WYK P+
Sbjct: 2761 NIQVPPSFQKLWEIGNMLDTGRNGEAKDVIINNPISLYCETNAAPPPTLTWYKDGHPLTS 2820
Query: 266 SDRIQRI--GSSLSISHVEESDSGVWNCVANNSEGQDKMQ 303
SD++ + G L I + D+G + CVA N G+D +Q
Sbjct: 2821 SDKVLILPGGRVLQIPRAKVEDAGRYTCVAVNEAGEDSLQ 2860
Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 79/352 (22%), Positives = 150/352 (42%), Gaps = 75/352 (21%)
Query: 22 VVDVGHRIELHCRVSPKRLSSAKAWLKDG-LVLRRNSDEVL------VLDRVQREDAGMY 74
+V V + +EL C V+ + WLKDG L+ R+ ++L V+ + Q + G+Y
Sbjct: 1745 IVMVNNLLELDCHVTGSPPPTI-MWLKDGQLIDERDGFKILLNGRKLVIAQAQVSNTGLY 1803
Query: 75 QCHV--SADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWL 132
+C +A D + V + + S +VVV + L C ++ + + WL
Sbjct: 1804 RCMAANTAGDHKKEFEVTVHVPPTIKSSGLSERVVVKY-KPVALQC-IANGIPNPSITWL 1861
Query: 133 KD--------GLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQ---V 181
KD G + ++S VL + + EDAG Y C + +L +H+ +
Sbjct: 1862 KDDQPVNTAQGNLKIQSSGRVLQIAKTLLEDAGRYTCVATNAAGETQQHIQLHVHEPPSL 1921
Query: 182 DESDRYRS----------YQCRGVNK-------------LTGASLLS-VNRGRLSLTENK 217
+++ + + +C+ L+G++ ++ +NRG++ E+
Sbjct: 1922 EDAGKMLNETVLVSNPVQLECKAAGNPVPVITWYKDNRLLSGSTSMTFLNRGQIIDIESA 1981
Query: 218 RL----------LSAAKMFEKHRILNVKKDESVI---------------LPCSAQGNPLP 252
++ +++A E L V S+ L C A+G P P
Sbjct: 1982 QISDAGIYKCVAINSAGATELFYSLQVHVAPSISGSNNMVAVVVNNPVRLECEARGIPAP 2041
Query: 253 TIKWYKQDSPVEE-SDRIQRI--GSSLSISHVEESDSGVWNCVANNSEGQDK 301
++ W K SPV S+ +Q + G L+++ + SD+G + CVA N+ G+ +
Sbjct: 2042 SLTWLKDGSPVSSFSNGLQVLSGGRILALTSAQISDTGRYTCVAVNAAGEKQ 2093
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
Query: 237 DESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS--SLSISHVEESDSGVWNCVAN 294
D+ + L C A G P P I W+K + ES R QR+ S SL I+ V+ D+G + C+A
Sbjct: 4093 DKPITLSCEADGLPPPDITWHKDGRAIVESIR-QRVLSSGSLQIAFVQPGDAGHYTCMAA 4151
Query: 295 NSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESV 354
N G +S +L +H R+ S E H +N ++
Sbjct: 4152 NVAGSSS---------------TSTKLTVHV----PPRIRST----EGHYTVN--ENSQA 4186
Query: 355 ILPCSAQGNPLPTIKYR 371
ILPC A G P P I ++
Sbjct: 4187 ILPCVADGIPTPAINWK 4203
Score = 56.6 bits (135), Expect = 3e-07, Method: Composition-based stats.
Identities = 82/362 (22%), Positives = 142/362 (39%), Gaps = 80/362 (22%)
Query: 20 QVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSD-------EVLVLDRVQREDAG 72
++ V G + C ++ + + AWL+DG L ++ VL L + + ED+G
Sbjct: 3444 EITVLKGSSTSMAC-ITDGTPAPSMAWLRDGQPLGLDAHLTVSTHGMVLQLLKAETEDSG 3502
Query: 73 MYQCHVSADDDSAQMSAQVILGGELVEIASSN------QVVVDVGHRIELHCRVSPKRLS 126
Y C A +++ ++S IL +++E N ++ V V + +EL C ++ +
Sbjct: 3503 KYTC--IASNEAGEVSKHFIL--KVLEPPHINGSEEHEEISVIVNNPLELTC-IASGIPA 3557
Query: 127 SAKAWLKDGLVLRRNSD-------EVLVLDRVQREDAGMYQCHI------EDGKYHMLSS 173
W+KDG L + EVL + Q ED G Y C +D +Y +
Sbjct: 3558 PKMTWMKDGRPLPQTDQVQTLGGGEVLRISTAQVEDTGRYTCLASSPAGDDDKEYLVRVH 3617
Query: 174 GELIIHQVDE-------SDRYRSYQCRG----------------------VNKLTGASLL 204
I DE +R + +C+ V L+G L
Sbjct: 3618 VPPNIAGTDEPRDITVLRNRQVTLECKSDAVPPPVITWLRNGERLQATPRVRILSGGRYL 3677
Query: 205 SVNRGRLSLTENKRLLSA--AKMFEKHRILNVKK---------------DESVILPCSAQ 247
+N L T N +++ A + IL V ++S +L C A+
Sbjct: 3678 QINNADLGDTANYTCVASNIAGKTTREFILTVNVPPNIKGGPQSLVILLNKSTVLECIAE 3737
Query: 248 GNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSGVWNCVANNSEGQDKMQLF 305
G P P I W K + + + I L I +D+G + C+A N+ G D+ ++
Sbjct: 3738 GVPTPRITWRKDGAVLAGNHARYSILENGFLHIQSAHVTDTGRYLCMATNAAGTDRRRID 3797
Query: 306 IQ 307
+Q
Sbjct: 3798 LQ 3799
Score = 56.6 bits (135), Expect = 3e-07, Method: Composition-based stats.
Identities = 84/363 (23%), Positives = 147/363 (40%), Gaps = 86/363 (23%)
Query: 28 RIELHCRVSPKRLSSAKAWLKDGLVLRRNSD--------EVLVLDRVQREDAGMYQCHV- 78
R+E R P + + WLKDG + S+ +L L Q D G Y C
Sbjct: 2030 RLECEARGIP---APSLTWLKDGSPVSSFSNGLQVLSGGRILALTSAQISDTGRYTCVAV 2086
Query: 79 -SADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCR---VSPKRLSSAKAWLKD 134
+A + + +V + + + V V + +EL C+ + P L+ WLKD
Sbjct: 2087 NAAGEKQRDIDLRVYVPPNI--MGEEQNVSVLISQAVELLCQSDAIPPPTLT----WLKD 2140
Query: 135 GLVLRRNSDEVLVLDR--VQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQC 192
G L + + +R ++ EDA QV ++ RY C
Sbjct: 2141 GHPLLKKPGLSISENRSVLKIEDA-----------------------QVQDTGRY---TC 2174
Query: 193 RGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLP 252
N + G + + N +++ + + ++ + L V + + L C + G P P
Sbjct: 2175 EATN-VAGKTEKNYN---VNIWVPPNIGGSDELTQ----LTVIEGNLISLLCESSGIPPP 2226
Query: 253 TIKWYKQDSPVEESDRIQRI-----GSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQ 307
+ W K+ SPV +D + R+ G L IS E+SD+ +++CVA+N G K + +Q
Sbjct: 2227 NLIWKKKGSPVL-TDSMGRVRILSGGRQLQISIAEKSDAALYSCVASNVAGTAKKEYNLQ 2285
Query: 308 YAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPT 367
+ + + +SG H + + V + +S+ L C QG P PT
Sbjct: 2286 -VYIRPTITNSGS---HPTE------------------IIVTRGKSISLECEVQGIPPPT 2323
Query: 368 IKY 370
+ +
Sbjct: 2324 VTW 2326
Score = 55.5 bits (132), Expect = 6e-07, Method: Composition-based stats.
Identities = 83/379 (21%), Positives = 130/379 (34%), Gaps = 85/379 (22%)
Query: 21 VVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNS-------DEVLVLDRVQREDAGM 73
V V + L C V+ + W KDG L+ + L + VQ G
Sbjct: 2489 VKVKEKQSVTLTCEVTGNPVPEI-TWHKDGQPLQEDEAHHIISGGRFLQITNVQVPHTGR 2547
Query: 74 YQCHVS--ADDDSAQMSAQVILGGELVEIASSNQ---VVVDVGHRIELHCRV---SPKRL 125
Y C S A S S V + + + S V V + L C P +
Sbjct: 2548 YTCLASSPAGHKSRSFSLNVFVSPTIAGVGSDGNPEDVTVILNSPTSLVCEAYSYPPATI 2607
Query: 126 SSAKAWLKDGLVLRRNSD-------EVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+ W KDG L N + L + Q ++AG Y C + +GE+I
Sbjct: 2608 T----WFKDGTPLESNRNIRILPGGRTLQILNAQEDNAGRYSCVATN------EAGEMIK 2657
Query: 179 HQVDESDRYRSYQCRGVNK--LTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKK 236
H + Y +NK L G L + + +K
Sbjct: 2658 HY-----EVKVYIPPIINKGDLWGPGL------------------------SPKEVKIKV 2688
Query: 237 DESVILPCSAQGNPLPTIKWYKQDSPVEESDR--IQRIGSSLSISHVEESDSGVWNCVAN 294
+ ++ L C A P ++ WYK P++ D I G +L I + SD+G + CVA+
Sbjct: 2689 NNTLTLECEAYAIPSASLSWYKDGQPLKSDDHVNIAANGHTLQIKEAQISDTGRYTCVAS 2748
Query: 295 NSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKK---D 351
N G+D++ + QV ++L M + R K +
Sbjct: 2749 NIAGEDELDFDVNI----------------QVPPSFQKLWEIGNMLDTGRNGEAKDVIIN 2792
Query: 352 ESVILPCSAQGNPLPTIKY 370
+ L C P PT+ +
Sbjct: 2793 NPISLYCETNAAPPPTLTW 2811
Score = 55.1 bits (131), Expect = 8e-07, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 127/321 (39%), Gaps = 68/321 (21%)
Query: 12 SIEMSPSGQVVVD-VGHRIELHCR---VSPKRLSSAKAWLKDGLVLRRNSD--EVLVLD- 64
SIE P +V+V+ + + + L C + P + AWLK+ + NSD EV +L
Sbjct: 3152 SIE-GPEREVIVETISNPVTLTCDATGIPPPTI----AWLKNHKRIE-NSDSLEVRILSG 3205
Query: 65 -------RVQREDAGMYQCHVSADDDSAQ----MSAQVILGGELVEIASSNQVVVDVGHR 113
R Q D+G Y C S + AQ +S QV EI S V V +G
Sbjct: 3206 GSKLQIARSQHSDSGNYTCIASNMEGKAQKYYFLSIQVPPSVAGAEIPSD--VSVLLGEN 3263
Query: 114 IELHCRVS--PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDA--GMYQCHIED-GKY 168
+EL C + P L WLKDG + E + RV + +Y D GKY
Sbjct: 3264 VELVCNANGIPTPLIQ---WLKDGKPIASGETERI---RVSANGSTLNIYGALTSDTGKY 3317
Query: 169 HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEK 228
+++ + E DR + + G E ++L++
Sbjct: 3318 TCVAT-----NPAGEEDRIFNLNVYVTPTIRGNK-----------DEAEKLMTLV----- 3356
Query: 229 HRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDS 286
D S+ + C A G P P I W K P+ S I+ + G + I + SD
Sbjct: 3357 --------DTSINIECRATGTPPPQINWLKNGLPLPLSSHIRLLAAGQVIRIVRAQVSDV 3408
Query: 287 GVWNCVANNSEGQDKMQLFIQ 307
V+ CVA+N G D +Q
Sbjct: 3409 AVYTCVASNRAGVDNKHYNLQ 3429
Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats.
Identities = 84/385 (21%), Positives = 149/385 (38%), Gaps = 81/385 (21%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVS--PKRLSSAKAWLKDGLVL------R 54
+F+ V+ + + P Q G + + C + PK AW + + + R
Sbjct: 604 VFLTVQEPPKVTVMPKNQSFTG-GSEVSIMCSATGYPK---PKIAWTVNDMFIVGSHRYR 659
Query: 55 RNSDEVLVLDRVQREDAGMYQCHVS--ADDDSAQMSAQVILGGELVEIASSNQVVVDVGH 112
SD L + +DAG+Y C S A D + + I +L+ + S +++V +G
Sbjct: 660 MTSDGTLFIKNAAPKDAGIYGCLASNSAGTDKQNSTLRYIEAPKLMVVQS--ELLVALGD 717
Query: 113 RIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLS 172
+ C+ S K W K L LR ++ L++D +
Sbjct: 718 ITVMECKTSGIPPPQVK-WFKGDLELRPST--FLIIDPLL-------------------- 754
Query: 173 SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRIL 232
G L I + + D Y C +N+ A+ G+++L + S ++ +
Sbjct: 755 -GLLKIQETQDLDA-GDYTCVAINEAGRAT------GKITLD----VGSPPVFIQEPADV 802
Query: 233 NVKKDESVILPCSAQGNPLPTIKWYKQDS------PVEESDRIQRIGSSLSISHVEESDS 286
+++ +V LPC QG P PTIKW + D+ P S Q +L I ++ SD
Sbjct: 803 SMEIGSNVTLPCYVQGYPEPTIKWRRLDNMPIFSRPFSVSSISQLRTGALFILNLWASDK 862
Query: 287 GVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRIL 346
G + C A N G+ + + + L A + +
Sbjct: 863 GTYICEAENQFGKIQSETTVTVTG-----------------------LVAPLIGISPSVA 899
Query: 347 NVKKDESVILPCS-AQGNPLPTIKY 370
NV + + + LPC+ GNP+P ++
Sbjct: 900 NVIEGQQLTLPCTLLAGNPIPERRW 924
Score = 51.6 bits (122), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 165 DGKYHMLSSG--ELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA 222
DG Y +LSSG E++ Q++ + RY C N A ++L ++ +
Sbjct: 3942 DG-YRILSSGAIEILATQLNHAGRY---TCVARNAAGSA------HRHVTLHVHEPPVIQ 3991
Query: 223 AKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS--LSISH 280
+ E H ILN ++LPC A G P P I W K+ V S R + S L IS
Sbjct: 3992 PQPSELHVILN----NPILLPCEATGTPSPFITWQKEGINVNTSGRNHAVLPSGGLQISR 4047
Query: 281 VEESDSGVWNCVANNSEGQ--DKMQLFIQ 307
D+G + CVA N G K++L +Q
Sbjct: 4048 AVREDAGTYMCVAQNPAGTALGKIKLNVQ 4076
Score = 51.6 bits (122), Expect = 1e-05, Method: Composition-based stats.
Identities = 70/296 (23%), Positives = 106/296 (35%), Gaps = 53/296 (17%)
Query: 23 VDVGHRIELHCRVSPKRL------SSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQC 76
V VG R+++ C L L DG N D L +D+ DAG+Y C
Sbjct: 1182 VQVGQRVDIPCNAQGTPLPVITWSKGGSTMLVDGEHHVSNPDGTLSIDQATPSDAGIYTC 1241
Query: 77 HVS--ADDDSAQMSAQVILGGELVEIASSNQVVVD---VGHRIELHC--RVSPKRLSSAK 129
+ A D +++ V + ++ RIE C + +PK
Sbjct: 1242 VATNIAGTDETEITLHVQEPPTVEDLEPPYNTTFQERVANQRIEFPCPAKGTPK---PTI 1298
Query: 130 AWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRS 189
WL +G L + +L EDG L+I V D
Sbjct: 1299 KWLHNGRELTGREPGISIL---------------EDGTL-------LVIASVTPYDN-GE 1335
Query: 190 YQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKK--DESVILPCSAQ 247
Y C VN+ G N ++ + +K ++ NV ++ L C +
Sbjct: 1336 YICVAVNE----------AGTTERKYNLKVHVPPVIKDKEQVTNVSVLLNQLTNLFCEVE 1385
Query: 248 GNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDSGVWNCVANNSEGQDK 301
G P P I WYK + V ES IQ + G L + D+G ++C A N G +
Sbjct: 1386 GTPSPIIMWYKDNVQVTESSTIQTVNNGKILKLFRATPEDAGRYSCKAINIAGTSQ 1441
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 240 VILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG-SSLSISHVEESDSGVWNCVANNSEG 298
+IL C A G P PTI W +Q + DR+ + +SL I+ ++ D+ + CVA N G
Sbjct: 4457 IILNCQATGEPQPTITWSRQGHSISWDDRVNVLSNNSLYIADAQKEDTSEFECVARNLMG 4516
Query: 299 QDKMQL-FIQYAHGKYHMLSS 318
+++ I HG + S+
Sbjct: 4517 SVLVRVPVIVQVHGGFSQWSA 4537
>sp|Q8IWV2|CNTN4_HUMAN Contactin-4 OS=Homo sapiens GN=CNTN4 PE=1 SV=1
Length = 1026
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 130/335 (38%), Gaps = 95/335 (28%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRV 120
L + +V++ D G Y C V+ ++ +LG I ++ V+ + +IE+
Sbjct: 179 LYIAKVEKSDVGNYTCVVTN-----TVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQF-- 231
Query: 121 SPKRLSSAKA------------------WLK-DGLVL-----RRNSDEVLVLDRVQREDA 156
P+ + +AK W + DG + R S+ +L + Q+EDA
Sbjct: 232 -PETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDA 290
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
G+Y+C E+ RG N V RG+L+
Sbjct: 291 GLYECVAEN--------------------------SRGKN---------VARGQLTF--- 312
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSL 276
+ +K ++V +E+V C A G P PT KW K P+ DRIQ +L
Sbjct: 313 ---YAQPNWIQKINDIHVAMEENVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTL 369
Query: 277 SISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSA 336
+I+ V SD+G++ C+A N G + S+ EL + V R L
Sbjct: 370 NITIVNLSDAGMYQCLAENKHGV---------------IFSNAELSVIAVGPDFSRTL-- 412
Query: 337 AKMFEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
R+ VK V++ C + +P P ++
Sbjct: 413 -----LKRVTLVKVGGEVVIECKPKASPKPVYTWK 442
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 65/321 (20%)
Query: 60 VLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDV--GHRIELH 117
+L+ + + +DAG YQC + + + L + + V V G + L
Sbjct: 84 LLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLL 143
Query: 118 CRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELI 177
C P + AW+ + Y + ++ ++ +G L
Sbjct: 144 CGPPPHSGELSYAWIFN-----------------------EYPSYQDNRRFVSQETGNLY 180
Query: 178 IHQVDESDRYRSYQCRGVNKLTGASLLSV-------NRGRLSLTENKRLLSAAKMFEKHR 230
I +V++SD +Y C N +T +L N G + E K + +
Sbjct: 181 IAKVEKSD-VGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET----- 234
Query: 231 ILNVKKDESVILPCSAQGNPLPTIKWYKQDS-PVEESDRIQRIGSSLSISHVEESDSGVW 289
+ K +V L C A GNP+PTI W + D P+ R + L I + ++ D+G++
Sbjct: 235 -VPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLY 293
Query: 290 NCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVK 349
CVA NS G++ ++ G+L + + +K ++V
Sbjct: 294 ECVAENSRGKN---------------VARGQLTFY----------AQPNWIQKINDIHVA 328
Query: 350 KDESVILPCSAQGNPLPTIKY 370
+E+V C A G P PT K+
Sbjct: 329 MEENVFWECKANGRPKPTYKW 349
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 121/318 (38%), Gaps = 84/318 (26%)
Query: 54 RRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHR 113
R S+ +L + Q+EDAG+Y+C Q+ + I N + V +
Sbjct: 273 RHKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEEN 332
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRE------------DAGMYQC 161
+ C+ + R WLK+G + +L DR+Q E DAGMYQC
Sbjct: 333 VFWECKAN-GRPKPTYKWLKNG-------EPLLTRDRIQIEQGTLNITIVNLSDAGMYQC 384
Query: 162 HIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLS 221
E+ + S+ EL + V G ++ LL
Sbjct: 385 LAENKHGVIFSNAELSVIAV------------------GPDF------------SRTLL- 413
Query: 222 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ-RIGSSLSISH 280
R+ VK V++ C + +P P W K ++E++RI +L I +
Sbjct: 414 -------KRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIIN 466
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
V +SD+G + C+A N G S+G L+ V + + ++ + M
Sbjct: 467 VTKSDAGSYTCIATNHFGTAS---------------STGNLV---VKDPTRVMVPPSSM- 507
Query: 341 EKHRILNVKKDESVILPC 358
+V ES++LPC
Sbjct: 508 ------DVTVGESIVLPC 519
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 21 VVVDVGHRIELHCR--VSPKRLSSAKAWLKDGLVLRRNS------DEVLVLDRVQREDAG 72
+V VG + + C+ SPK + + W K +L+ N D L + V + DAG
Sbjct: 417 TLVKVGGEVVIECKPKASPKPVYT---WKKGRDILKENERITISEDGNLRIINVTKSDAG 473
Query: 73 MYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKRLSSAKAW 131
Y C + +A + +++ + + + V VG I L C+V+ L W
Sbjct: 474 SYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTW 533
Query: 132 LKDG--LVLRRNSDEV-----------LVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+G + R+ D L++ +Q + AG Y C ++ + ++ +LI+
Sbjct: 534 SFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIV 593
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVEES--DRIQRIGSSLSISHVEES-DSGVWNCV 292
+++ V L C +GNP P I+W + V+ R + SL I++ ++ D+G + C
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 293 ANNSEG 298
A NS G
Sbjct: 102 ATNSFG 107
>sp|Q69Z26|CNTN4_MOUSE Contactin-4 OS=Mus musculus GN=Cntn4 PE=2 SV=2
Length = 1026
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 129/336 (38%), Gaps = 97/336 (28%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILG-------------GEL---VEIASSN 104
L + +V++ D G Y C V+ ++ +LG GE +E+
Sbjct: 179 LYIAKVEKSDVGNYTCVVTN-----TVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPE 233
Query: 105 QVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVL-----RRNSDEVLVLDRVQREDAGMY 159
V + G ++L C + + DG + R S+ +L + Q+EDAG Y
Sbjct: 234 TVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSY 293
Query: 160 QCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRL 219
+C E+ RG N V +G+L+
Sbjct: 294 ECVAEN--------------------------SRGKN---------VAKGQLTFYAQPNW 318
Query: 220 LSAAKMFEKHRILN---VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSL 276
+ +I+N V +ESV C A G P PT +W K P+ DRIQ +L
Sbjct: 319 V---------QIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTL 369
Query: 277 SISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGEL-IIHQVDEKNKRLLS 335
+I+ V SD+G++ CVA N G + SS EL +I + + ++ LL
Sbjct: 370 NITIVNLSDAGMYQCVAENKHGV---------------IFSSAELSVIAESPDFSRTLL- 413
Query: 336 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
R+ VK V++ C + +P P +R
Sbjct: 414 -------KRVTLVKVGGEVVIECKPKASPRPVYTWR 442
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 130/324 (40%), Gaps = 96/324 (29%)
Query: 54 RRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSN--QVVVDVG 111
R S+ +L + Q+EDAG Y+C A++ + A+ G+L A N Q++ D+
Sbjct: 273 RHKSNGILEIPNFQQEDAGSYEC--VAENSRGKNVAK----GQLTFYAQPNWVQIINDIH 326
Query: 112 HRIE----LHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRE------------D 155
+E C+ + R WLK+G D +L DR+Q E D
Sbjct: 327 VAMEESVFWECKAN-GRPKPTYRWLKNG-------DPLLTRDRIQIEQGTLNITIVNLSD 378
Query: 156 AGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTE 215
AGMYQC E+ + SS EL + + ES +
Sbjct: 379 AGMYQCVAENKHGVIFSSAELSV--IAESPDF---------------------------- 408
Query: 216 NKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ-RIGS 274
++ LL R+ VK V++ C + +P P W K + E++RI
Sbjct: 409 SRTLL--------KRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDG 460
Query: 275 SLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLL 334
+L I +V +SD+G + C+A N G S+G +I V + K ++
Sbjct: 461 NLRIINVTKSDAGSYTCIATNHFGTAS---------------STGNVI---VKDPTKVMV 502
Query: 335 SAAKMFEKHRILNVKKDESVILPC 358
+ M +V ES++LPC
Sbjct: 503 PPSSM-------DVTVGESIVLPC 519
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 128/322 (39%), Gaps = 67/322 (20%)
Query: 60 VLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVE---IASSNQVVVDVGHRIEL 116
+L+ + + +DAG YQC ++ + +S + L +E + + V V G + L
Sbjct: 84 LLINNPNKTQDAGTYQC-IATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVL 142
Query: 117 HCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGEL 176
C P + AW+ + Y + ++ ++ +G L
Sbjct: 143 LCGPPPHSGELSYAWIFN-----------------------EYPSYQDNRRFVSQETGNL 179
Query: 177 IIHQVDESDRYRSYQCRGVNKLTGASLLSV-------NRGRLSLTENKRLLSAAKMFEKH 229
I +V++SD +Y C N +T +L N G + E K + +
Sbjct: 180 YIAKVEKSD-VGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET---- 234
Query: 230 RILNVKKDESVILPCSAQGNPLPTIKWYKQDS-PVEESDRIQRIGSSLSISHVEESDSGV 288
+ +K +V L C A GNP+PTI W + D P+ R + L I + ++ D+G
Sbjct: 235 --VPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGS 292
Query: 289 WNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNV 348
+ CVA NS G++ ++ G+L + + + ++V
Sbjct: 293 YECVAENSRGKN---------------VAKGQLTFY----------AQPNWVQIINDIHV 327
Query: 349 KKDESVILPCSAQGNPLPTIKY 370
+ESV C A G P PT ++
Sbjct: 328 AMEESVFWECKANGRPKPTYRW 349
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 25/180 (13%)
Query: 21 VVVDVGHRIELHCR--VSPKRLSSAKAWLKDGLVLRRNS------DEVLVLDRVQREDAG 72
+V VG + + C+ SP+ + + W K +LR N D L + V + DAG
Sbjct: 417 TLVKVGGEVVIECKPKASPRPVYT---WRKGREILRENERITISEDGNLRIINVTKSDAG 473
Query: 73 MYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKRLSSAKAW 131
Y C + +A + VI+ + + + V VG I L C+V+ L W
Sbjct: 474 SYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTW 533
Query: 132 L---------KDGLVLRR----NSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
KDG R +S L++ +Q + AG Y C ++ + + +LI+
Sbjct: 534 TFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIV 593
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 236 KDESVILPCSAQGNPLPTIKW--YKQDSPVEESDRIQRIGSSLSISHVEES-DSGVWNCV 292
+++ V L C +GNP P I+W D + R + SL I++ ++ D+G + C+
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 101
Query: 293 ANNSEG 298
A NS G
Sbjct: 102 ATNSFG 107
>sp|O15146|MUSK_HUMAN Muscle, skeletal receptor tyrosine-protein kinase OS=Homo sapiens
GN=MUSK PE=1 SV=1
Length = 869
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 40/210 (19%)
Query: 165 DGKYHMLSSGELI-IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
D +Y + +G+L+ I V++SD Y C N + GA + G L + ++
Sbjct: 72 DTRYSIRENGQLLTILSVEDSDD-GIYCCTANNGVGGAV---ESCGALQVKMKPKITRPP 127
Query: 224 KMFEKHRILNVKKDESV--ILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-SLSISH 280
+NVK E + +LPC+ GNP P++ W K DSP+ E+ RI + S SL I +
Sbjct: 128 --------INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSPLRENSRIAVLESGSLRIHN 179
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
V++ D+G + CVA NS G A+ K ++ E R+L A
Sbjct: 180 VQKEDAGQYRCVAKNSLGT---------AYSK---------VVKLEVEVFARILRAP--- 218
Query: 341 EKHRILNVKKDESVILPCSAQGNPLPTIKY 370
E H NV V L C+A G P+PTI +
Sbjct: 219 ESH---NVTFGSFVTLHCTATGIPVPTITW 245
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
E+ + +L SG L IH V + D + Y+C N L A V +L + R+L A
Sbjct: 163 ENSRIAVLESGSLRIHNVQKEDAGQ-YRCVAKNSLGTAYSKVV---KLEVEVFARILRAP 218
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV-----EESDRIQRIGSSLSI 278
E H NV V L C+A G P+PTI W + + V +ES + + I S L +
Sbjct: 219 ---ESH---NVTFGSFVTLHCTATGIPVPTITWIENGNAVSSGSIQESVKDRVIDSRLQL 272
Query: 279 SHVEESDSGVWNCVANNSEGQ 299
+ G++ C+A N G+
Sbjct: 273 FI---TKPGLYTCIATNKHGE 290
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRV--SPKRLSSAKAWLKDGLVLRRNSDEVLV 62
+QVK I P +++ G + L C +PK + +W+K LR NS + V
Sbjct: 115 LQVKMKPKITRPPINVKIIE-GLKAVLPCTTMGNPK---PSVSWIKGDSPLRENS-RIAV 169
Query: 63 LD-------RVQREDAGMYQCHVSADDDSAQMSAQVILGGELVE--IASSNQVVVDVGHR 113
L+ VQ+EDAG Y+C V+ + S V L E+ + + V G
Sbjct: 170 LESGSLRIHNVQKEDAGQYRC-VAKNSLGTAYSKVVKLEVEVFARILRAPESHNVTFGSF 228
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRE-------DAGMYQC 161
+ LHC + + + W+++G + S + V DRV G+Y C
Sbjct: 229 VTLHCTATGIPVPTI-TWIENGNAVSSGSIQESVKDRVIDSRLQLFITKPGLYTC 282
>sp|P13596|NCAM1_RAT Neural cell adhesion molecule 1 OS=Rattus norvegicus GN=Ncam1 PE=1
SV=1
Length = 858
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 155/403 (38%), Gaps = 105/403 (26%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG------------ 50
F+ SL +++ PS Q + VG C+V+ +W
Sbjct: 12 FFLGTAVSLQVDIVPS-QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRIS 70
Query: 51 LVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDV 110
+V + L + +DAG+Y+C V+A+D + S V V +
Sbjct: 71 VVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ----------------SEATVNVKI 114
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHI------- 163
++ +P+ + D V+V D V + H
Sbjct: 115 FQKLMFKNAPTPQEF-------------KEGEDAVIVCDVVSSLPPTIIWKHKGRDVILK 161
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
+D ++ +LS+ L I + ++D +Y+C G +L+ RG ++ + + +++
Sbjct: 162 KDVRFIVLSNNYLQIRGIKKTDE-GTYRCEG-------RILA--RGEINFKDIQVIVNVP 211
Query: 224 KMFE-KHRILNVKKD--ESVILPCSAQGNPLPTIKWYKQDSPV--EESDRIQRI----GS 274
+ + I+N + +SV L C A G P PT+ W K P+ EE D + I S
Sbjct: 212 PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 271
Query: 275 SLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLL 334
L+I +V+++D + C+A N G+ + +
Sbjct: 272 ELTIRNVDKNDEAEYVCIAENKAGEQDASIHL---------------------------- 303
Query: 335 SAAKMFEKHRILNVKK------DESVILPCSAQGNPLPTIKYR 371
K+F K +I V+ +E V L C A G+P+P+I +R
Sbjct: 304 ---KVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWR 343
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 66/283 (23%)
Query: 57 SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIEL 116
S+ L + +++ D G Y+C +++ GE+ QV+V+V ++
Sbjct: 170 SNNYLQIRGIKKTDEGTYRCE-----------GRILARGEIN--FKDIQVIVNVPPTVQA 216
Query: 117 HCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLS--SG 174
+ + +A A L + L ++D +D + ED + H+ S S
Sbjct: 217 R-----QSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 271
Query: 175 ELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNV 234
EL I VD++D Y C NK G S++ K+F K +I V
Sbjct: 272 ELTIRNVDKNDEAE-YVCIAENK-AGEQDASIH---------------LKVFAKPKITYV 314
Query: 235 KK------DESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ------------------ 270
+ +E V L C A G+P+P+I W + ++
Sbjct: 315 ENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRPEKQETLDGHMVVRS 374
Query: 271 --RIGSSLSISHVEESDSGVWNCVANNSEGQD--KMQLFIQYA 309
R+ SSL++ ++ +D+G + C A+N+ GQD M L +QYA
Sbjct: 375 HARV-SSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYA 416
>sp|Q62682|CNTN3_RAT Contactin-3 OS=Rattus norvegicus GN=Cntn3 PE=1 SV=1
Length = 1028
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 135/331 (40%), Gaps = 88/331 (26%)
Query: 55 RNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSN--QVVVDVGH 112
R + VL + Q+ED G Y+C A++ + A+ G L A Q++ DV
Sbjct: 276 RKFNGVLEIPNFQQEDTGSYECI--AENSRGKNVAR----GRLTYYAKPYWVQLLKDVET 329
Query: 113 RIE----LHCRVSPKRLSSAKAWLKDG--LVLRRN---SDEVLVLDRVQREDAGMYQCHI 163
+E CR S K S + WLK+G LVL + L + + D+GM+QC
Sbjct: 330 AVEDSLYWECRASGKPKPSYR-WLKNGDALVLEERIQIENGALTIANLNVSDSGMFQCIA 388
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
E+ + SS EL ++L++A
Sbjct: 389 ENKHGLIYSSAEL-----------------------------------------KVLASA 407
Query: 224 KMFEKH---RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG-SSLSIS 279
F ++ +++ V+ VIL C +P W K D+ V E RI + L I
Sbjct: 408 PDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIM 467
Query: 280 HVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKM 339
+V ++D+G++ C+A N G+ A+G ++ V E + +L+ + M
Sbjct: 468 NVTKADAGIYTCIAENQFGK---------ANGTTQLV---------VTEPTRIILAPSNM 509
Query: 340 FEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+V ES+ILPC Q +PL I +
Sbjct: 510 -------DVAVGESIILPCQVQHDPLLDIMF 533
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 127/331 (38%), Gaps = 101/331 (30%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRV 120
L + +V+ D G Y C V++ +A+ +LG + S+ V+ + +IEL
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNAR-----VLGSPTPLVLRSDGVMGEYEPKIELQF-- 233
Query: 121 SPKRLSSAKA------------------WLK-DGLVLR-----RNSDEVLVLDRVQREDA 156
P+ L +AK W + DG+ R + VL + Q+ED
Sbjct: 234 -PETLPAAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIKLRKFNGVLEIPNFQQEDT 292
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
G Y+C E+ RG N V RGRL+
Sbjct: 293 GSYECIAEN--------------------------SRGKN---------VARGRLTYYAK 317
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSL 276
+ K E ++S+ C A G P P+ +W K + +RIQ +L
Sbjct: 318 PYWVQLLKDVE------TAVEDSLYWECRASGKPKPSYRWLKNGDALVLEERIQIENGAL 371
Query: 277 SISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSA 336
+I+++ SDSG++ C+A N G + SS EL ++L++
Sbjct: 372 TIANLNVSDSGMFQCIAENKHGL---------------IYSSAEL----------KVLAS 406
Query: 337 AKMFEKH---RILNVKKDESVILPCSAQGNP 364
A F ++ +++ V+ VIL C +P
Sbjct: 407 APDFSRNPMKKMIQVQVGSLVILDCKPSASP 437
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 23 VDVGHRIELHCR--VSPKRLSSAKAWLKDGLVLRRNS------DEVLVLDRVQREDAGMY 74
V VG + L C+ SP+ LS W K V+R + D L + V + DAG+Y
Sbjct: 421 VQVGSLVILDCKPSASPRALS---FWKKGDTVVREQARISLLNDGGLKIMNVTKADAGIY 477
Query: 75 QCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKRLSSAKAWLK 133
C A + Q+++ I + + + V VG I L C+V L AW
Sbjct: 478 TCIAENQFGKANGTTQLVVTEPTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYF 537
Query: 134 DGLVLRRNSDEV------------LVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+G + D L++ +Q + +G Y C ++ G + S+ ELI+
Sbjct: 538 NGTLTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIV 594
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVEES--DRIQRIGSSLSISHVEES-DSGVWNCV 292
+D+ + L C A+GNP P +W S ++ S R + G +L + + + D+G + C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCF 101
Query: 293 ANNSEG 298
A NS G
Sbjct: 102 ATNSLG 107
>sp|Q28106|CNTN1_BOVIN Contactin-1 OS=Bos taurus GN=CNTN1 PE=2 SV=1
Length = 1018
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 51/249 (20%)
Query: 56 NSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIE 115
S VL + +Q ED G+Y+C + + A++ + + N VD+G +
Sbjct: 290 TSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLY 349
Query: 116 LHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGE 175
C + K + + + WLK+G R L L V E+AGMYQC E+ + ++ E
Sbjct: 350 WPCVATGKPIPTIR-WLKNGYSYHRGE---LRLYDVTFENAGMYQCIAENTHGAIYANAE 405
Query: 176 LIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFE----KHRI 231
L ++L+ A FE K +I
Sbjct: 406 L-----------------------------------------KILALAPTFEMNPMKKKI 424
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWN 290
L K VI+ C + P PT W K + S RI SL I+++ SD GV+
Sbjct: 425 LAAKGGR-VIIECKPKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYT 483
Query: 291 CVANNSEGQ 299
C N++G+
Sbjct: 484 CFVENNKGK 492
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 147/373 (39%), Gaps = 62/373 (16%)
Query: 6 QVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG---LVLRRNS---DE 59
Q +++ E SP G+V L+CR K + +G L R S
Sbjct: 46 QPINTIYPEESPEGKV--------SLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGN 97
Query: 60 VLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSN--QVVVDVGHRIELH 117
+++ + +++DAG+Y C S + + + + G L +V V G + L
Sbjct: 98 LVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLL 157
Query: 118 CRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELI 177
C D L R +E V + + ++ ++G L
Sbjct: 158 C--------DPPYHFPDDLSYRWLLNEFPVFITMDKR------------RFVSQTNGNLY 197
Query: 178 IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKD 237
I V+ SD+ +Y C + S+ S + L E A + + + +
Sbjct: 198 IANVEASDK-GNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMG 256
Query: 238 ESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSE 297
++V L C A GNP+P I+W K P+ + I G+ L I +++ D G++ C A N+
Sbjct: 257 QNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNR 316
Query: 298 GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILP 357
G+DK Q + ++ + E + H D + +++ D + P
Sbjct: 317 GKDKHQ-------ARIYVQAFPEWVEHINDTE----------------VDIGSD--LYWP 351
Query: 358 CSAQGNPLPTIKY 370
C A G P+PTI++
Sbjct: 352 CVATGKPIPTIRW 364
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 23 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADD 82
VD+G + C + K + + + WLK+G R L L V E+AGMYQC
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIR-WLKNGYSYHRGE---LRLYDVTFENAGMYQCIAENTH 397
Query: 83 DSAQMSAQV---ILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLR 139
+ +A++ L +++ G R+ + C+ PK G
Sbjct: 398 GAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECK--PKAAPKPTFLWSKGTERL 455
Query: 140 RNSDEVLV-------LDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
NS +L+ ++ + R D G+Y C +E+ K S+G L+I
Sbjct: 456 VNSSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVI 501
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 223 AKMFEKHRILNVKKDES----VILPCSAQGNPLPTIKWYKQDSPVE-ESDRIQRIGSSLS 277
+FE+ I + +ES V L C A+ +P P KW + ++ SDR +G +L
Sbjct: 40 GPIFEEQPINTIYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 278 ISHVE-ESDSGVWNCVANNSEG 298
I++ + + D+G++ C+A+N+ G
Sbjct: 100 INNPDKQKDAGIYYCLASNNYG 121
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 107/329 (32%), Gaps = 95/329 (28%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVE----------IASSNQVVVDV 110
L + V+ D G Y C VS+ + + ++ I L E + V +
Sbjct: 196 LYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVVQFKDVYALM 255
Query: 111 GHRIELHCRVSPKRLSSAKAWLK-----DGLVLRRNSDEVLVLDRVQREDAGMYQCHIED 165
G + L C + + W K S VL + +Q ED G+Y+C E+
Sbjct: 256 GQNVTLECFALGNPVPDIR-WRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAEN 314
Query: 166 GKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKM 225
NRG+ + + +
Sbjct: 315 -----------------------------------------NRGKDKHQARIYVQAFPEW 333
Query: 226 FEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESD 285
E V + PC A G P+PTI+W K + L + V +
Sbjct: 334 VEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGE--------LRLYDVTFEN 385
Query: 286 SGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFE---- 341
+G++ C+A N+ G + ++ EL ++L+ A FE
Sbjct: 386 AGMYQCIAENTHGA---------------IYANAEL----------KILALAPTFEMNPM 420
Query: 342 KHRILNVKKDESVILPCSAQGNPLPTIKY 370
K +IL K VI+ C + P PT +
Sbjct: 421 KKKILAAKGGR-VIIECKPKAAPKPTFLW 448
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 24/189 (12%)
Query: 12 SIEMSP-SGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV-------L 63
+ EM+P +++ G R+ + C+ PK G NS +L+ +
Sbjct: 414 TFEMNPMKKKILAAKGGRVIIECK--PKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEI 471
Query: 64 DRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-P 122
+ + R D G+Y C V + A + +++ I + + VG + C S
Sbjct: 472 NNITRSDGGVYTCFVENNKGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFD 531
Query: 123 KRLSSAKAWLKDGLVLRRNSDEV-------------LVLDRVQREDAGMYQCHIEDGKYH 169
L W +G V+ N + + L++ Q + AG Y C + +
Sbjct: 532 PALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDN 591
Query: 170 MLSSGELII 178
+S +L++
Sbjct: 592 SSASADLVV 600
>sp|Q7ZW34|CNTN5_DANRE Contactin-5 OS=Danio rerio GN=cntn5 PE=2 SV=1
Length = 1056
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 53/261 (20%)
Query: 55 RNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRI 114
R S VL + +Q ED+G Y+C + + I+ N +D G ++
Sbjct: 306 RKSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLDSGEQL 365
Query: 115 ELHCRVSPKRLSSAKAWLKDGLVLRRNS-----DEVLVLDRVQREDAGMYQCHIEDGKYH 169
CR + K + + WL++G L S + L + R+Q+ D+GMYQC E+
Sbjct: 366 RWECRATGKPRPTYR-WLRNGEPLSTQSRVEMVNGELTIHRLQQADSGMYQCIAENKYGA 424
Query: 170 MLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH 229
+ SS EL ++L++A MF +
Sbjct: 425 IYSSAEL-----------------------------------------KILASAPMFNNN 443
Query: 230 R---ILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESD 285
I V KD V L C + +P P I W K D ++ S RI + ++L I + SD
Sbjct: 444 PVRLIATVGKD--VSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSD 501
Query: 286 SGVWNCVANNSEGQDKMQLFI 306
G + C A N G ++ +
Sbjct: 502 EGSYVCRAENQFGSAELTTVL 522
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 125/330 (37%), Gaps = 88/330 (26%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQ-MSAQVILG-------GEL---VEIASSNQVVVD 109
L + +VQ D G Y C V +A+ +S L GE +E V+
Sbjct: 212 LYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAA 271
Query: 110 VGHRIELHCRVSPKRLSSAKAWLK-DGLVLR----RNSDEVLVLDRVQREDAGMYQCHIE 164
G + L C + + W K G + + R S VL + +Q ED+G Y+C E
Sbjct: 272 KGVTVRLECFALGNPVPTI-TWRKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYECKAE 330
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+ + G L ++ + + +S+ + +L S
Sbjct: 331 NTRGGTAFRGHLQVYTLPQ--------------------------WISMINDTQLDSG-- 362
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEES 284
E + C A G P PT +W + P+ R++ + L+I ++++
Sbjct: 363 -------------EQLRWECRATGKPRPTYRWLRNGEPLSTQSRVEMVNGELTIHRLQQA 409
Query: 285 DSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHR 344
DSG++ C+A N G + SS EL ++L++A MF +
Sbjct: 410 DSGMYQCIAENKYGA---------------IYSSAEL----------KILASAPMFNNNP 444
Query: 345 ---ILNVKKDESVILPCSAQGNPLPTIKYR 371
I V KD V L C + +P P I +R
Sbjct: 445 VRLIATVGKD--VSLECRPRASPKPRISWR 472
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 173 SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRIL 232
+G L I +V SD SY C+ N +T A +LS L+L + + E H
Sbjct: 209 TGNLYIPKVQPSD-VGSYVCQVKNTVTNARVLSPPT-PLTLKTDGVMGEYEPKIEAHFPQ 266
Query: 233 NV--KKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWN 290
V K +V L C A GNP+PTI W K + + R+++ + L I +++ DSG +
Sbjct: 267 TVLAAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYE 326
Query: 291 CVANNSEGQDKMQLFIQ 307
C A N+ G + +Q
Sbjct: 327 CKAENTRGGTAFRGHLQ 343
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
D +Y ++ G LIIH E Y YQCR N + +LS R +L + L
Sbjct: 105 DFRYSLID-GNLIIHNASEVIDYGRYQCRAENSI--GIVLS----RDALLQFAYL---GP 154
Query: 225 MFEKHR-ILNVKKDESVILPCSAQG-NPLPTIKWYKQDSP---VEESDR-IQRIGSSLSI 278
K R ++V++ + V+L C+ +P W + P E+S R I + +L I
Sbjct: 155 FSGKTRGAVSVREGQGVVLMCAPPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYI 214
Query: 279 SHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAK 338
V+ SD G + C N+ + +LS + + D +
Sbjct: 215 PKVQPSDVGSYVCQVKNTVTNAR-------------VLSPPTPLTLKTDGVMGEYEPKIE 261
Query: 339 MFEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
+L K +V L C A GNP+PTI +R
Sbjct: 262 AHFPQTVL-AAKGVTVRLECFALGNPVPTITWR 293
Score = 38.9 bits (89), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 20 QVVVDVGHRIELHCR--VSPK-RLSSAKAWLKDG---------LVLRRNSDEVLVLDRVQ 67
+++ VG + L CR SPK R+S W K+ ++LR N+ ++
Sbjct: 446 RLIATVGKDVSLECRPRASPKPRIS----WRKNDRRLQPSRRIMLLRNNTLRII---NSS 498
Query: 68 REDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKRLS 126
R D G Y C SA+++ +++ + S +V V VG + L C+V+ L
Sbjct: 499 RSDEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVTVGESVVLSCKVTHDPSLD 558
Query: 127 SAKAWL---------KDG----LVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSS 173
+ WL +DG + ++S L++ + + AG Y C + +L+
Sbjct: 559 VSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAE 618
Query: 174 GELII 178
EL++
Sbjct: 619 AELLV 623
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 237 DESVILPCSAQGNPLPTIKWYKQDSPVE-ESD-RIQRIGSSLSISHVEES-DSGVWNCVA 293
D+ +I+ C A+GNP+PT W + V+ E+D R I +L I + E D G + C A
Sbjct: 74 DKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNLIIHNASEVIDYGRYQCRA 133
Query: 294 NNSEG 298
NS G
Sbjct: 134 ENSIG 138
>sp|Q62845|CNTN4_RAT Contactin-4 OS=Rattus norvegicus GN=Cntn4 PE=1 SV=1
Length = 1026
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 128/328 (39%), Gaps = 81/328 (24%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQM---SAQVILG-----GEL---VEIASSNQVVVD 109
L + +V++ D G Y C V+ S Q+ +IL GE +E+ V +
Sbjct: 179 LYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAE 238
Query: 110 VGHRIELHCRVSPKRLSSAKAWLKDGLVL-----RRNSDEVLVLDRVQREDAGMYQCHIE 164
G ++L C + + DG + R S +L + Q+EDAG Y+C E
Sbjct: 239 KGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSSGILEIPNFQQEDAGSYECVAE 298
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+ + ++ G++ + Q V +
Sbjct: 299 NSRGKNIAKGQVTFYA----------QPNWVQIIND------------------------ 324
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEES 284
++V +ESV C A G P PT +W K P+ +RIQ +L+I+ V S
Sbjct: 325 -------IHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRERIQIEQGTLNITIVNLS 377
Query: 285 DSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGEL-IIHQVDEKNKRLLSAAKMFEKH 343
D+G++ CVA N G + YA S EL +I + + ++ LL
Sbjct: 378 DAGMYQCVAENKHG-------VIYA--------SAELSVIAESPDFSRTLL--------K 414
Query: 344 RILNVKKDESVILPCSAQGNPLPTIKYR 371
R+ VK V++ C + +P P +R
Sbjct: 415 RVTLVKVGGEVVIECKPKASPRPVYTWR 442
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 120/318 (37%), Gaps = 84/318 (26%)
Query: 54 RRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHR 113
R S +L + Q+EDAG Y+C QV + + N + V +
Sbjct: 273 RHKSSGILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNWVQIINDIHVAMEES 332
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRE------------DAGMYQC 161
+ C+ + R WLK+G D +L +R+Q E DAGMYQC
Sbjct: 333 VFWECKAN-GRPKPTYRWLKNG-------DPLLTRERIQIEQGTLNITIVNLSDAGMYQC 384
Query: 162 HIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLS 221
E+ + +S EL + + ES + ++ LL
Sbjct: 385 VAENKHGVIYASAELSV--IAESPDF----------------------------SRTLL- 413
Query: 222 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ-RIGSSLSISH 280
R+ VK V++ C + +P P W K + E++RI +L I +
Sbjct: 414 -------KRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIIN 466
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
V +SD+G + C+A N G S+G ++ V + K ++ + M
Sbjct: 467 VTKSDAGSYTCIATNHFGTAS---------------STGNVV---VKDPTKVMVPPSSM- 507
Query: 341 EKHRILNVKKDESVILPC 358
+V ES++LPC
Sbjct: 508 ------DVTVGESIVLPC 519
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 123/322 (38%), Gaps = 67/322 (20%)
Query: 60 VLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVE---IASSNQVVVDVGHRIEL 116
+L+ + + +D+G YQC ++ + +S + L +E + + V V G + L
Sbjct: 84 LLINNPNKTQDSGTYQC-IATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVL 142
Query: 117 HCRVSPKRLSSAKAWL-------KDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYH 169
C P + AW+ +D L + +V++ D G Y C +
Sbjct: 143 LCGPPPHSGELSYAWIFNEHPSYQDNRRFVSQETGNLYIAKVEKADVGNYTCVV------ 196
Query: 170 MLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH 229
++ S+Q G L+ N G + E K + +
Sbjct: 197 --------------TNTVTSHQVLG----PPTPLILRNDGVMGEYEPKIEVQFPET---- 234
Query: 230 RILNVKKDESVILPCSAQGNPLPTIKWYKQDS-PVEESDRIQRIGSSLSISHVEESDSGV 288
+ +K +V L C A GNP+PTI W + D P+ R + L I + ++ D+G
Sbjct: 235 --VPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSSGILEIPNFQQEDAGS 292
Query: 289 WNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNV 348
+ CVA NS G++ I ++ + II+ + +V
Sbjct: 293 YECVAENSRGKN-----IAKGQVTFYAQPNWVQIINDI--------------------HV 327
Query: 349 KKDESVILPCSAQGNPLPTIKY 370
+ESV C A G P PT ++
Sbjct: 328 AMEESVFWECKANGRPKPTYRW 349
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 21 VVVDVGHRIELHCR--VSPKRLSSAKAWLKDGLVLRRNS------DEVLVLDRVQREDAG 72
+V VG + + C+ SP+ + + W K +LR N D L + V + DAG
Sbjct: 417 TLVKVGGEVVIECKPKASPRPVYT---WRKGREILRENERITISEDGNLRIINVTKSDAG 473
Query: 73 MYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKRLSSAKAW 131
Y C + +A + V++ + + + V VG I L C+V+ L W
Sbjct: 474 SYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTW 533
Query: 132 L---------KDGLVLRR----NSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
KDG R +S L++ +Q + AG Y C ++ + ++ +LI+
Sbjct: 534 TFNGHLIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIV 593
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 236 KDESVILPCSAQGNPLPTIKW--YKQDSPVEESDRIQRIGSSLSISHVEES-DSGVWNCV 292
+++ V L C +GNP P I+W D + R + SL I++ ++ DSG + C+
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDSGTYQCI 101
Query: 293 ANNSEG 298
A NS G
Sbjct: 102 ATNSFG 107
>sp|P13595|NCAM1_MOUSE Neural cell adhesion molecule 1 OS=Mus musculus GN=Ncam1 PE=1 SV=3
Length = 1115
Score = 69.3 bits (168), Expect = 5e-11, Method: Composition-based stats.
Identities = 85/403 (21%), Positives = 156/403 (38%), Gaps = 105/403 (26%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWL------------KDG 50
F+ SL +++ PS Q + VG C+V+ +W +
Sbjct: 12 FFLGTAVSLQVDIVPS-QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRIS 70
Query: 51 LVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDV 110
+V + L + +DAG+Y+C V+A+D + S V V +
Sbjct: 71 VVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ----------------SEATVNVKI 114
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHI------- 163
++ +P+ + D V+V D V + H
Sbjct: 115 FQKLMFKNAPTPQEF-------------KEGEDAVIVCDVVSSLPPTIIWKHKGRDVILK 161
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
+D ++ +LS+ L I + ++D +Y+C G +L+ RG ++ + + +++
Sbjct: 162 KDVRFIVLSNNYLQIRGIKKTDE-GTYRCEG-------RILA--RGEINFKDIQVIVNVP 211
Query: 224 KMFE-KHRILNVKKD--ESVILPCSAQGNPLPTIKWYKQDSPVE--ESDRIQRI----GS 274
+ + I+N + +SV L C A G P PT+ W K P+E E D + I S
Sbjct: 212 PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 271
Query: 275 SLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLL 334
L+I +V+++D + C+A N G+ + +
Sbjct: 272 ELTIRNVDKNDEAEYVCIAENKAGEQDASIHL---------------------------- 303
Query: 335 SAAKMFEKHRILNVKK------DESVILPCSAQGNPLPTIKYR 371
K+F K +I V+ +E V L C A G+P+P+I +R
Sbjct: 304 ---KVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWR 343
Score = 60.1 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 70/281 (24%)
Query: 57 SDEVLVLDRVQREDAGMYQCH--VSADDDSAQMSAQVILGGELVEIASSNQVVVD----V 110
S+ L + +++ D G Y+C + A + QVI+ + + Q +V+ +
Sbjct: 170 SNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIV--NVPPTVQARQSIVNATANL 227
Query: 111 GHRIELHCRVS--PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKY 168
G + L C P+ S W KDG + ++ E+ ED +
Sbjct: 228 GQSVTLVCDADGFPEPTMS---WTKDG-------------EPIENEE--------EDDEK 263
Query: 169 HMLS--SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMF 226
H+ S S EL I VD++D Y C NK G S++ K+F
Sbjct: 264 HIFSDDSSELTIRNVDKNDE-AEYVCIAENK-AGEQDASIH---------------LKVF 306
Query: 227 EKHRILNVKK------DESVILPCSAQGNPLPTIKWYKQDSPVEESDRI----------Q 270
K +I V+ +E V L C A G+P+P+I W + ++
Sbjct: 307 AKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKTLDGHMVVRSHA 366
Query: 271 RIGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHG 311
R+ SSL++ ++ +D+G + C A+N+ GQD +++++ +
Sbjct: 367 RV-SSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEFQYA 406
Score = 36.6 bits (83), Expect = 0.30, Method: Composition-based stats.
Identities = 61/297 (20%), Positives = 105/297 (35%), Gaps = 76/297 (25%)
Query: 45 AWLKDGLVLRRNSDE-----------VLVLDRVQREDAGMYQC--HVSADDDSAQMSAQV 91
+W KDG + ++ L + V + D Y C A + A + +V
Sbjct: 246 SWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKV 305
Query: 92 ILGGELVEIASSNQVVVDVGHRIELHC------------RVSPKRLSSAKAWLKDGLVLR 139
++ + NQ +++ ++ L C R S + +SS + L +V+R
Sbjct: 306 FAKPKITYV--ENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKTLDGHMVVR 363
Query: 140 RNSD-EVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKL 198
++ L L +Q DAG Y C + I Q D Y +Q KL
Sbjct: 364 SHARVSSLTLKSIQYTDAGEYICTASN-----------TIGQ-DSQSMYLEFQY--APKL 409
Query: 199 TGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYK 258
G + G V + C P TI W++
Sbjct: 410 QGPVAVYTWEG----------------------------NQVNITCEVFAYPSATISWFR 441
Query: 259 QDSPVEESDRIQ-RIGSSLSISHVE-----ESDSGVWNCVANNSEGQDKMQLFIQYA 309
+ S+ +I ++ S S++E E+D G +NC A N GQ+ ++ + A
Sbjct: 442 DGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQA 498
>sp|Q91048|PTK7_CHICK Inactive tyrosine-protein kinase 7 OS=Gallus gallus GN=PTK7 PE=2
SV=1
Length = 1051
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 149/378 (39%), Gaps = 95/378 (25%)
Query: 14 EMSPSGQVVVDV--GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRE-- 69
EM+P V+ GHR+ C P+ + + + W + RN + V RV +E
Sbjct: 305 EMAPFSPKVLTANQGHRVSCAC---PRGVPTPQVWWE------RNQERVPTAGRVYQEAE 355
Query: 70 ----------DAGMYQCHVS--ADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELH 117
DAG+Y CH + A + ++S V + VE+ +Q+ + LH
Sbjct: 356 QLVFTSITEADAGIYTCHAANKAGEKKQELSITVATVPKWVEMPKDSQL--EESKPGYLH 413
Query: 118 CRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELI 177
C +S L W ++G+ + ED ++ + +G L
Sbjct: 414 C-LSKASLKPTVTWYRNGVSIS------------------------EDSRFEISENGTLR 448
Query: 178 IHQVDESDRYRSYQCRGVNKLTGASLLSVNR----GRLSLTENKRLLSAAKMFEKHRILN 233
I+ V+ D Y+C V+ S+ R +L T + L +
Sbjct: 449 INNVEVYDG-TMYKC--VSSTPAGSIEGYARVHVLEKLKFTPPPQPLQCMEF-------- 497
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVA 293
++ V + CSA G PTI+W K D S R G LS V SDSG + C+A
Sbjct: 498 ---NKEVTVSCSATGREKPTIQWTKTDGSSLPSHVSHRAG-ILSFHKVSRSDSGNYTCIA 553
Query: 294 NNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDES 353
+NS Q +++ +Q Y + +++ + +++ H +
Sbjct: 554 SNSP-QGEIRATVQLVVAVY--------VTFKLEPE------PTTVYQGH---------T 589
Query: 354 VILPCSAQGNPLPTIKYR 371
+ C A+G+P+P I+++
Sbjct: 590 AMFQCQAEGDPVPHIQWK 607
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 167 KYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMF 226
K + ++G L+I QV ++ Y+C G + A +L + L L E + + +
Sbjct: 258 KTTVFANGSLLITQV-KARSTGVYKCIGHGQKGKALVL---KATLRLAEIEEMAPFSP-- 311
Query: 227 EKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDS 286
++L + V C +G P P + W + V + R+ + L + + E+D+
Sbjct: 312 ---KVLTANQGHRVSCAC-PRGVPTPQVWWERNQERVPTAGRVYQEAEQLVFTSITEADA 367
Query: 287 GVWNCVANNSEGQDKMQLFIQYA 309
G++ C A N G+ K +L I A
Sbjct: 368 GIYTCHAANKAGEKKQELSITVA 390
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-SLSISHVEESDSGVWN 290
L V K+E + C P PT +W +DSP+ + + SL I+ V+ +GV+
Sbjct: 222 LIVTKNEEAMFDCQFAAVPPPTQEWLFEDSPITNRSKTTVFANGSLLITQVKARSTGVYK 281
Query: 291 CVANNSEGQ 299
C+ + +G+
Sbjct: 282 CIGHGQKGK 290
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 10/136 (7%)
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA 222
I+D + L VD S+QC N TG + N + N + +
Sbjct: 59 IQDTEQRFKEGSNLQFAAVDRHRDAGSFQCVARNVQTGEEARTAN-----ASFNIKWMET 113
Query: 223 AKMFEKH--RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS---SLS 277
+ K ++ +V+L C G+P PT +W++ +P+ + + S +L+
Sbjct: 114 GSVVLKQPASAAEIQPSSTVVLRCHIDGHPRPTWQWFRDGAPLPDGRGTYSVSSKERTLT 173
Query: 278 ISHVEESDSGVWNCVA 293
+ D+G++ C A
Sbjct: 174 LRGAGPDDNGLYYCSA 189
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEE-SDSGVWNCVANNSE 297
S IL C + +W + P++++++ + GS+L + V+ D+G + CVA N +
Sbjct: 35 SAILRCEVEEPAHVEFEWLQNGLPIQDTEQRFKEGSNLQFAAVDRHRDAGSFQCVARNVQ 94
Query: 298 GQDKMQLFIQYAHGKYHM--LSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVI 355
++ + A+ +++ + +G +++ K+ SAA+ ++ +V+
Sbjct: 95 TGEEART----ANASFNIKWMETGSVVL-------KQPASAAE---------IQPSSTVV 134
Query: 356 LPCSAQGNPLPTIKY 370
L C G+P PT ++
Sbjct: 135 LRCHIDGHPRPTWQW 149
>sp|P36335|NCA12_XENLA Neural cell adhesion molecule 1-B OS=Xenopus laevis GN=ncam1-b PE=2
SV=1
Length = 1092
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 134/318 (42%), Gaps = 64/318 (20%)
Query: 60 VLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCR 119
L + V +DAG+Y+C S++ + GE S V + + ++
Sbjct: 77 TLTIYNVSSQDAGIYKCVASSETE-----------GE-----SEGTVNLKIYQKLTFKYA 120
Query: 120 VSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIH 179
+P+ + + D +++ S + + + G +D ++ +L++ L I
Sbjct: 121 PTPQEFTEGE----DAVIICDVSSSIPSI--ITWRHKGKDVIFKKDVRFVVLANNYLQIR 174
Query: 180 QVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRI---LNVKK 236
+ ++D +Y+C G +L+ RG ++ + + +++ + + +I
Sbjct: 175 GIKKTDE-GNYRCEG-------RILA--RGEINYKDIQVIVNVPPLIQARQIRVNATANM 224
Query: 237 DESVILPCSAQGNPLPTIKWYKQDSPVEESDR---IQRIGSSLSISHVEESDSGVWNCVA 293
DESV+L C A G P P I W K+ P+E+ + S ++I VE+ D ++C+A
Sbjct: 225 DESVVLSCDADGFPDPEISWLKKGEPIEDGEEKISFNEDKSEMTIYRVEKEDEAEYSCIA 284
Query: 294 NNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDES 353
NN G+ + + + ++ + KM V+ DE
Sbjct: 285 NNQAGEAEAIVLL-------------------------KVYAKPKMTYVENKTTVELDE- 318
Query: 354 VILPCSAQGNPLPTIKYR 371
+ L C A G+P+P+I +R
Sbjct: 319 ITLTCEASGDPIPSITWR 336
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 148/336 (44%), Gaps = 76/336 (22%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG--LVLRRN------ 56
+++ L+ + +P+ Q + G + C VS + S W G ++ +++
Sbjct: 109 LKIYQKLTFKYAPTPQEFTE-GEDAVIICDVS-SSIPSIITWRHKGKDVIFKKDVRFVVL 166
Query: 57 SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIEL 116
++ L + +++ D G Y+C +++ GE+ QV+V+V I+
Sbjct: 167 ANNYLQIRGIKKTDEGNYRCE-----------GRILARGEIN--YKDIQVIVNVPPLIQA 213
Query: 117 -HCRVSPKRLSSAKAWLKDGLVLRRNSD-----EVLVLDRVQREDAGMYQCHIEDGKYHM 170
RV+ A A + + +VL ++D E+ L + + + G + + K
Sbjct: 214 RQIRVN------ATANMDESVVLSCDADGFPDPEISWLKKGEPIEDGEEKISFNEDK--- 264
Query: 171 LSSGELIIHQVDESDRYRSYQCRGVNKLTGAS---LLSV-NRGRLSLTENKRLLSAAKMF 226
E+ I++V++ D Y C N+ A LL V + +++ ENK
Sbjct: 265 ---SEMTIYRVEKEDEAE-YSCIANNQAGEAEAIVLLKVYAKPKMTYVENK--------- 311
Query: 227 EKHRILNVKKDESVILPCSAQGNPLPTIKW---YKQDSPVEES--------DRIQRIGSS 275
V+ DE + L C A G+P+P+I W ++ S E++ D I+ S+
Sbjct: 312 -----TTVELDE-ITLTCEASGDPIPSITWRTAHRNISSEEKTLDGHIVVKDHIRM--SA 363
Query: 276 LSISHVEESDSGVWNCVANNSEGQDKMQLF--IQYA 309
L++ ++ +D+G + CVA+N G D ++ +QYA
Sbjct: 364 LTLKDIQYTDAGEYFCVASNPIGVDMQAMYFEVQYA 399
>sp|Q63198|CNTN1_RAT Contactin-1 OS=Rattus norvegicus GN=Cntn1 PE=1 SV=2
Length = 1021
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 138/351 (39%), Gaps = 54/351 (15%)
Query: 28 RIELHCRVSPKRLSSAKAWLKDGLVLRRN------SDEVLVLDRVQREDAGMYQCHVSAD 81
++ L+CR K + +G V N +++ + +++DAG+Y C S +
Sbjct: 60 KVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNN 119
Query: 82 DDSAQMSAQVILGGELVEIASSN--QVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLR 139
+ + + G L + +V V G + L C D L R
Sbjct: 120 YGMVRSTEATLSFGYLDPFPPEDRPEVKVKEGKGMVLLC--------DPPYHFPDDLSYR 171
Query: 140 RNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLT 199
+E V + + ++ ++G L I V+ SDR +Y C +
Sbjct: 172 WLLNEFPVFITMDKR------------RFVSQTNGNLYIANVESSDR-GNYSCFVSSPSI 218
Query: 200 GASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQ 259
S+ S + + E A + + + + ++V L C A GNP+P I+W K
Sbjct: 219 TKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKV 278
Query: 260 DSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSG 319
P+ + I G+ L I +++ D G++ C A N G+DK Q + ++ +
Sbjct: 279 LEPMPTTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQ-------ARIYVQAFP 331
Query: 320 ELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
E + H D + +++ D + PC A G P+PTI++
Sbjct: 332 EWVEHINDTE----------------VDIGSD--LYWPCVATGKPIPTIRW 364
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 97/248 (39%), Gaps = 51/248 (20%)
Query: 57 SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIEL 116
S VL + +Q ED G+Y+C + A++ + + N VD+G +
Sbjct: 291 SGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYW 350
Query: 117 HCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGEL 176
C + K + + + WLK+G + L L V E+AGMYQC E+ + ++ EL
Sbjct: 351 PCVATGKPIPTIR-WLKNGYAYHKGE---LRLYDVTFENAGMYQCIAENAYGTIYANAEL 406
Query: 177 IIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFE----KHRIL 232
++L+ A FE K +IL
Sbjct: 407 -----------------------------------------KILALAPTFEMNPMKKKIL 425
Query: 233 NVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNC 291
K VI+ C + P P W K + S RI SL I+++ +D G++ C
Sbjct: 426 AAKGGR-VIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTC 484
Query: 292 VANNSEGQ 299
A N+ G+
Sbjct: 485 FAENNRGK 492
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 23 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADD 82
VD+G + C + K + + + WLK+G + L L V E+AGMYQC A++
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIR-WLKNGYAYHKGE---LRLYDVTFENAGMYQC--IAEN 395
Query: 83 DSAQMSAQVILGGELVEIASS-------NQVVVDVGHRIELHCR--VSPK-RLSSAKA-- 130
+ A L +++ +A + +++ G R+ + C+ +PK + S +K
Sbjct: 396 AYGTIYANAEL--KILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTE 453
Query: 131 WLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
WL + + D L ++ + R D G+Y C E+ + S+G L+I
Sbjct: 454 WLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVI 501
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 223 AKMFEKHRILNVKKDES----VILPCSAQGNPLPTIKWYKQDSPVE-ESDRIQRIGSSLS 277
+FE+ I + +ES V L C A+ +P P KW + V+ +DR +G +L
Sbjct: 40 GPIFEEQPINTIYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLV 99
Query: 278 ISHVE-ESDSGVWNCVANNSEG 298
I++ + + D+G++ C+A+N+ G
Sbjct: 100 INNPDKQKDAGIYYCLASNNYG 121
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 38/132 (28%)
Query: 243 PCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKM 302
PC A G P+PTI+W K + + L + V ++G++ C+A N+ G
Sbjct: 351 PCVATGKPIPTIRWLKNGYAYHKGE--------LRLYDVTFENAGMYQCIAENAYGT--- 399
Query: 303 QLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFE----KHRILNVKKDESVILPC 358
+ ++ EL ++L+ A FE K +IL K VI+ C
Sbjct: 400 ------------IYANAEL----------KILALAPTFEMNPMKKKILAAKGGR-VIIEC 436
Query: 359 SAQGNPLPTIKY 370
+ P P +
Sbjct: 437 KPKAAPKPKFSW 448
Score = 39.3 bits (90), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 76/189 (40%), Gaps = 22/189 (11%)
Query: 12 SIEMSP-SGQVVVDVGHRIELHCR--VSPK-RLSSAKA--WLKDGLVLRRNSDEVLVLDR 65
+ EM+P +++ G R+ + C+ +PK + S +K WL + + D L ++
Sbjct: 414 TFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINN 473
Query: 66 VQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKR 124
+ R D G+Y C + A + +++ I + + VG + C S
Sbjct: 474 ITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPS 533
Query: 125 LSSAKAWLKDGLVLRRN---------------SDEVLVLDRVQREDAGMYQCHIEDGKYH 169
L W +G V+ N ++ L++ Q + AG Y C + +
Sbjct: 534 LDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDN 593
Query: 170 MLSSGELII 178
+S +L++
Sbjct: 594 SSASADLVV 602
>sp|G5EBF1|SAX3_CAEEL Protein sax-3 OS=Caenorhabditis elegans GN=sax-3 PE=2 SV=1
Length = 1273
Score = 68.6 bits (166), Expect = 8e-11, Method: Composition-based stats.
Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 29/288 (10%)
Query: 21 VVVDVGHRIELHCRVS--PKRLSSAKAWLKDGLVLRR---NSDEVLVLDRVQREDAGMYQ 75
+ VDVG + CRV+ P+ + K + V R + L ++RVQ D G Y
Sbjct: 236 MTVDVGAAVLFDCRVTGDPQPQITWKRKNEPMPVTRAYIAKDNRGLRIERVQPSDEGEYV 295
Query: 76 CHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG 135
C+ + + SA + + V G C + + S A W K+G
Sbjct: 296 CYARNPAGTLEASAHLRVQAPPSFQTKPADQSVPAGGTATFECTLVGQP-SPAYFWSKEG 354
Query: 136 LVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGV 195
++L V DG+ + +G L I +V + D +Y C G+
Sbjct: 355 ------QQDLLFPSYVS-----------ADGRTKVSPTGTLTIEEVRQVDE-GAYVCAGM 396
Query: 196 NKLTGASL--LSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPT 253
N G+SL ++ ++T N + H+ + S ILPC A G P P
Sbjct: 397 NS-AGSSLSKAALKVTTKAVTGNTPAKPPPTIEHGHQNQTLMVGSSAILPCQASGKPTPG 455
Query: 254 IKWYKQDSPVEESD-RI-QRIGSSLSISHVEESDSGVWNCVANNSEGQ 299
I W + P++ +D RI Q SL I+ +++ D+GV+ C+A N +G+
Sbjct: 456 ISWLRDGLPIDITDSRISQHSTGSLHIADLKKPDTGVYTCIAKNEDGE 503
Score = 59.7 bits (143), Expect = 4e-08, Method: Composition-based stats.
Identities = 83/303 (27%), Positives = 117/303 (38%), Gaps = 64/303 (21%)
Query: 21 VVVDVGHRIELHCRVSPKRLSSAK-AWLKDGLVLRRNSDEV----LVLD----------- 64
VVV G L+C P S+AK W KDG + N ++V +VLD
Sbjct: 40 VVVSRGSPATLNCGAKP---STAKITWYKDGQPVITNKEQVNSHRIVLDTGSLFLLKVNS 96
Query: 65 --RVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDV--GHRIELHCRV 120
+ DAG Y C S + + + + L E V G L C
Sbjct: 97 GKNGKDSDAGAYYCVASNEHGEVKSNEGSLKLAMLREDFRVRPRTVQALGGEMAVLEC-- 154
Query: 121 SPKR--LSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIED-GKYHMLSSGELI 177
SP R +W KD LR I+D +Y + S G LI
Sbjct: 155 SPPRGFPEPVVSWRKDDKELR-----------------------IQDMPRYTLHSDGNLI 191
Query: 178 IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKH-RILNVKK 236
I VD SD +YQC N + G + N RLS+ E + FE+ + + V
Sbjct: 192 IDPVDRSDS-GTYQCVA-NNMVGERV--SNPARLSVFEKPK-------FEQEPKDMTVDV 240
Query: 237 DESVILPCSAQGNPLPTIKWYKQDSPVEESDR-IQRIGSSLSISHVEESDSGVWNCVANN 295
+V+ C G+P P I W +++ P+ + I + L I V+ SD G + C A N
Sbjct: 241 GAAVLFDCRVTGDPQPQITWKRKNEPMPVTRAYIAKDNRGLRIERVQPSDEGEYVCYARN 300
Query: 296 SEG 298
G
Sbjct: 301 PAG 303
Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats.
Identities = 70/282 (24%), Positives = 108/282 (38%), Gaps = 76/282 (26%)
Query: 106 VVVDVGHRIELHCRVSPKRLSSAK-AWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIE 164
VVV G L+C P S+AK W KDG + N ++V R+ + ++ +
Sbjct: 40 VVVSRGSPATLNCGAKP---STAKITWYKDGQPVITNKEQVNS-HRIVLDTGSLFLLKVN 95
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLT---ENKRLLS 221
GK +G+ +SD +Y C N+ + N G L L E+ R+
Sbjct: 96 SGK-----NGK-------DSDA-GAYYCVASNE---HGEVKSNEGSLKLAMLREDFRV-- 137
Query: 222 AAKMFEKHRILNVKKDESVILPCSA-QGNPLPTIKWYKQDSPVEESDRIQRIGSS---LS 277
+ R + E +L CS +G P P + W K D + D + S L
Sbjct: 138 ------RPRTVQALGGEMAVLECSPPRGFPEPVVSWRKDDKELRIQDMPRYTLHSDGNLI 191
Query: 278 ISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAA 337
I V+ SDSG + CVANN G+ R+ + A
Sbjct: 192 IDPVDRSDSGTYQCVANNMVGE--------------------------------RVSNPA 219
Query: 338 KM--FEKHRILNVKKD------ESVILPCSAQGNPLPTIKYR 371
++ FEK + KD +V+ C G+P P I ++
Sbjct: 220 RLSVFEKPKFEQEPKDMTVDVGAAVLFDCRVTGDPQPQITWK 261
>sp|P13590|NCAM1_CHICK Neural cell adhesion molecule 1 OS=Gallus gallus GN=NCAM1 PE=1 SV=3
Length = 1091
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 155/402 (38%), Gaps = 104/402 (25%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG----------LV 52
F+ +SL +++ PS Q + VG C+V+ + +W +
Sbjct: 12 FFLGAAASLQVDIVPS-QGEISVGESKFFLCQVAGEAKYKDISWFSPNGEKLTPNQQRIS 70
Query: 53 LRRNSD--EVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDV 110
+ RN D L + +DAG+Y+C VS+ + E S V V +
Sbjct: 71 VVRNDDFSSTLTIYNANIDDAGIYKCVVSS----------------VEEGDSEATVNVKI 114
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHI------- 163
++ +P+ + D V+V D V + H
Sbjct: 115 FQKLMFKNAPTPQEF-------------KEGDDAVIVCDVVSSLPPTIIWKHKGRDVMLK 161
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
+D ++ +LS+ L I + ++D +Y+C G +L+ RG ++ + + +++
Sbjct: 162 KDVRFIVLSNNYLQIRGIKKTDE-GTYRCEG-------RILA--RGEINFKDIQVIVNVP 211
Query: 224 KMF-EKHRILNVKKD--ESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-----GSS 275
+ +N + +SV L C A G P PT+ W K P+E+ D ++ GS
Sbjct: 212 PSVRARQSTMNATANLSQSVTLACDADGFPEPTMTWTKDGEPIEQEDNEEKYSFNYDGSE 271
Query: 276 LSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLS 335
L I V++SD + C+A N G+ + +
Sbjct: 272 LIIKKVDKSDEAEYICIAENKAGEQDATIHL----------------------------- 302
Query: 336 AAKMFEKHRILNVKK------DESVILPCSAQGNPLPTIKYR 371
K+F K +I V+ ++ + L C A G+P+P+I ++
Sbjct: 303 --KVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWK 342
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 43/266 (16%)
Query: 57 SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIEL 116
S+ L + +++ D G Y+C +++ GE+ QV+V+V +
Sbjct: 170 SNNYLQIRGIKKTDEGTYRCE-----------GRILARGEIN--FKDIQVIVNVPPSVRA 216
Query: 117 HCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSG-E 175
+ +A A L + L ++D +D + + KY G E
Sbjct: 217 R-----QSTMNATANLSQSVTLACDADGFPEPTMTWTKDGEPIEQEDNEEKYSFNYDGSE 271
Query: 176 LIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVK 235
LII +VD+SD Y C NK G T + ++ + K+ ++
Sbjct: 272 LIIKKVDKSDEAE-YICIAENKA----------GEQDATIHLKVFAKPKITYVENKTAME 320
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVEESDRI----------QRIGSSLSISHVEESD 285
++ + L C A G+P+P+I W + ++ R+ SSL++ ++ +D
Sbjct: 321 LEDQITLTCEASGDPIPSITWKTSTRNISNEEKTLDGRIVVRSHARV-SSLTLKEIQYTD 379
Query: 286 SGVWNCVANNSEGQDK--MQLFIQYA 309
+G + C A+N+ GQD M L +QYA
Sbjct: 380 AGEYVCTASNTIGQDSQAMYLEVQYA 405
>sp|Q62838|MUSK_RAT Muscle, skeletal receptor tyrosine protein kinase OS=Rattus
norvegicus GN=Musk PE=1 SV=1
Length = 868
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 40/210 (19%)
Query: 165 DGKYHMLSSGELI-IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
D +Y + +G+L+ I V++SD Y C N + GA + G L + ++
Sbjct: 72 DTRYSIRENGQLLTILSVEDSDD-GIYCCTANNGVGGAV---ESCGALQVKMKPKITRPP 127
Query: 224 KMFEKHRILNVKKDESV--ILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-SLSISH 280
+NVK E + +LPC+ GNP P++ W K DS + E+ RI + S SL I +
Sbjct: 128 --------INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHN 179
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
V++ D+G + CVA NS G A+ K L+ +V E R+L A
Sbjct: 180 VQKEDAGQYRCVAKNSLGT---------AYSK--------LVKLEV-EVFARILRAP--- 218
Query: 341 EKHRILNVKKDESVILPCSAQGNPLPTIKY 370
E H NV V L C+A G P+PTI +
Sbjct: 219 ESH---NVTFGSFVTLRCTAIGMPVPTISW 245
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
E+ + +L SG L IH V + D + Y+C N L A V +L + R+L A
Sbjct: 163 ENSRIAVLESGSLRIHNVQKEDAGQ-YRCVAKNSLGTAYSKLV---KLEVEVFARILRAP 218
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV-----EESDRIQRIGSSLSI 278
E H NV V L C+A G P+PTI W + + V +E+ + + I S L +
Sbjct: 219 ---ESH---NVTFGSFVTLRCTAIGMPVPTISWIENGNAVSSGSIQENVKDRVIDSRLQL 272
Query: 279 SHVEESDSGVWNCVANNSEGQ 299
+ G++ C+A N G+
Sbjct: 273 FI---TKPGLYTCIATNKHGE 290
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRV--SPKRLSSAKAWLKDGLVLRRNSDEVLV 62
+QVK I P +++ G + L C +PK + +W+K LR NS + V
Sbjct: 115 LQVKMKPKITRPPINVKIIE-GLKAVLPCTTMGNPK---PSVSWIKGDSALRENS-RIAV 169
Query: 63 LD-------RVQREDAGMYQCHVSADDDSAQMSAQVILGGELVE--IASSNQVVVDVGHR 113
L+ VQ+EDAG Y+C V+ + S V L E+ + + V G
Sbjct: 170 LESGSLRIHNVQKEDAGQYRC-VAKNSLGTAYSKLVKLEVEVFARILRAPESHNVTFGSF 228
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRE-------DAGMYQC 161
+ L C + + +W+++G + S + V DRV G+Y C
Sbjct: 229 VTLRCTAIGMPVPTI-SWIENGNAVSSGSIQENVKDRVIDSRLQLFITKPGLYTC 282
>sp|Q07409|CNTN3_MOUSE Contactin-3 OS=Mus musculus GN=Cntn3 PE=2 SV=2
Length = 1028
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 134/331 (40%), Gaps = 88/331 (26%)
Query: 55 RNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSN--QVVVDVGH 112
R + +L + Q+ED G Y+C A++ + A+ G L A Q++ DV
Sbjct: 276 RKFNGMLEIQNFQQEDTGSYEC--IAENSRGKNVAR----GRLTYYAKPYWLQLLRDVEI 329
Query: 113 RIE----LHCRVSPKRLSSAKAWLKDG--LVLRRN---SDEVLVLDRVQREDAGMYQCHI 163
+E CR S K S + WLK+G LVL + L + + D+GM+QC
Sbjct: 330 AVEDSLYWECRASGKPKPSYR-WLKNGDALVLEERIQIENGALTITNLNVTDSGMFQCIA 388
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
E+ + SS EL +++++A
Sbjct: 389 ENKHGLIYSSAEL-----------------------------------------KVVASA 407
Query: 224 KMFEKH---RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIG-SSLSIS 279
F ++ +++ V+ VIL C + +P W K D V E R+ + L I
Sbjct: 408 PDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIM 467
Query: 280 HVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKM 339
+V ++D+G + C A N G+ A+G H++ V E + +L+ + M
Sbjct: 468 NVTKADAGTYTCTAENQFGK---------ANGTTHLV---------VTEPTRIILAPSNM 509
Query: 340 FEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+V ESVILPC Q +PL I +
Sbjct: 510 -------DVAVGESVILPCQVQHDPLLDIMF 533
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 129/331 (38%), Gaps = 101/331 (30%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRV 120
L + +V+ D G Y C V++ + + +LG + S+ V+ + +IE+
Sbjct: 181 LYIAKVEPSDVGNYTCVVTSTVTNTR-----VLGSPTPLVLRSDGVMGEYEPKIEVQF-- 233
Query: 121 SPKRLSSAKA------------------WLK-DGLVLR-----RNSDEVLVLDRVQREDA 156
P+ L +AK W + DG+ R + +L + Q+ED
Sbjct: 234 -PETLPAAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKFNGMLEIQNFQQEDT 292
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
G Y+C E+ RG N V RGRL+
Sbjct: 293 GSYECIAEN--------------------------SRGKN---------VARGRLTYYAK 317
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSL 276
L + R + + ++S+ C A G P P+ +W K + +RIQ +L
Sbjct: 318 PYWL------QLLRDVEIAVEDSLYWECRASGKPKPSYRWLKNGDALVLEERIQIENGAL 371
Query: 277 SISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSA 336
+I+++ +DSG++ C+A N G + SS EL +++++
Sbjct: 372 TITNLNVTDSGMFQCIAENKHGL---------------IYSSAEL----------KVVAS 406
Query: 337 AKMFEKH---RILNVKKDESVILPCSAQGNP 364
A F ++ +++ V+ VIL C + +P
Sbjct: 407 APDFSRNPMKKMVQVQVGSLVILDCKPRASP 437
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 21 VVVDVGHRIELHC--RVSPKRLSSAKAWLKDGLVLRRNS------DEVLVLDRVQREDAG 72
V V VG + L C R SP+ LS W K +++R + D L + V + DAG
Sbjct: 419 VQVQVGSLVILDCKPRASPRALS---FWKKGDMMVREQARVSFLNDGGLKIMNVTKADAG 475
Query: 73 MYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKRLSSAKAW 131
Y C A + +++ I + + + V VG + L C+V L AW
Sbjct: 476 TYTCTAENQFGKANGTTHLVVTEPTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAW 535
Query: 132 LKDGLVLRRNSDEV------------LVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+G + D L++ +Q + +G Y C ++ G + S+ ELI+
Sbjct: 536 YFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIV 594
Score = 35.0 bits (79), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVEES-DRIQRI--GSSLSISHVEESDSGVWNCV 292
+D+ + L C A+GNP P +W S ++ S D ++ G+ + I+ D+G + C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCF 101
Query: 293 ANNSEG 298
A NS G
Sbjct: 102 ATNSLG 107
>sp|P12960|CNTN1_MOUSE Contactin-1 OS=Mus musculus GN=Cntn1 PE=1 SV=1
Length = 1020
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 137/351 (39%), Gaps = 54/351 (15%)
Query: 28 RIELHCRVSPKRLSSAKAWLKDGLVLRRN------SDEVLVLDRVQREDAGMYQCHVSAD 81
++ L+CR K + +G V N +++ + +++DAG+Y C S +
Sbjct: 60 KVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGVYYCLASNN 119
Query: 82 DDSAQMSAQVILGGELVEIASSN--QVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLR 139
+ + + G L +V V G + L C D L R
Sbjct: 120 YGMVRSTEATLSFGYLDPFPPEERPEVKVKEGKGMVLLC--------DPPYHFPDDLSYR 171
Query: 140 RNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLT 199
+E V + + ++ ++G L I V+ SDR +Y C +
Sbjct: 172 WLLNEFPVFITMDKR------------RFVSQTNGNLYIANVESSDR-GNYSCFVSSPSI 218
Query: 200 GASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQ 259
S+ S + + E A + + + + ++V L C A GNP+P I+W K
Sbjct: 219 TKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKV 278
Query: 260 DSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSG 319
P+ + I G+ L I +++ D G++ C A N G+DK Q + ++ +
Sbjct: 279 LEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQ-------ARIYVQAFP 331
Query: 320 ELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
E + H D + +++ D + PC A G P+PTI++
Sbjct: 332 EWVEHINDTE----------------VDIGSD--LYWPCIATGKPIPTIRW 364
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 116/302 (38%), Gaps = 65/302 (21%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLV 62
++ + ++++E G V D+ R L S +S++ A VL
Sbjct: 251 IYTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGA--------------VLK 296
Query: 63 LDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSP 122
+ +Q ED G+Y+C + A++ + + N VD+G + C +
Sbjct: 297 IFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATG 356
Query: 123 KRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVD 182
K + + + WLK+G + L L V E+AGMYQC E+ + ++ EL
Sbjct: 357 KPIPTIR-WLKNGYSYHKGE---LRLYDVTFENAGMYQCIAENAYGSIYANAEL------ 406
Query: 183 ESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFE----KHRILNVKKDE 238
++L+ A FE K +IL K
Sbjct: 407 -----------------------------------KILALAPTFEMNPMKKKILAAKGGR 431
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNCVANNSE 297
VI+ C + P P W K + S RI SL I+++ +D G++ C A N+
Sbjct: 432 -VIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNR 490
Query: 298 GQ 299
G+
Sbjct: 491 GK 492
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 23 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADD 82
VD+G + C + K + + + WLK+G + L L V E+AGMYQC
Sbjct: 342 VDIGSDLYWPCIATGKPIPTIR-WLKNGYSYHKGE---LRLYDVTFENAGMYQCIAENAY 397
Query: 83 DSAQMSAQV---ILGGELVEIASSNQVVVDVGHRIELHCR--VSPK-RLSSAKA--WLKD 134
S +A++ L +++ G R+ + C+ +PK + S +K WL +
Sbjct: 398 GSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN 457
Query: 135 GLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+ D L ++ + R D G+Y C E+ + S+G L+I
Sbjct: 458 SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVI 501
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 223 AKMFEKHRILNVKKDES----VILPCSAQGNPLPTIKWYKQDSPVE-ESDRIQRIGSSLS 277
+FE+ I + +ES V L C A+ +P P KW + V+ +DR +G +L
Sbjct: 40 GPIFEEQPINTIYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLV 99
Query: 278 ISHVE-ESDSGVWNCVANNSEG 298
I++ + + D+GV+ C+A+N+ G
Sbjct: 100 INNPDKQKDAGVYYCLASNNYG 121
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 38/132 (28%)
Query: 243 PCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKM 302
PC A G P+PTI+W K + + L + V ++G++ C+A N+ G
Sbjct: 351 PCIATGKPIPTIRWLKNGYSYHKGE--------LRLYDVTFENAGMYQCIAENAYGS--- 399
Query: 303 QLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFE----KHRILNVKKDESVILPC 358
+ ++ EL ++L+ A FE K +IL K VI+ C
Sbjct: 400 ------------IYANAEL----------KILALAPTFEMNPMKKKILAAKGGR-VIIEC 436
Query: 359 SAQGNPLPTIKY 370
+ P P +
Sbjct: 437 KPKAAPKPKFSW 448
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 76/189 (40%), Gaps = 22/189 (11%)
Query: 12 SIEMSP-SGQVVVDVGHRIELHCR--VSPK-RLSSAKA--WLKDGLVLRRNSDEVLVLDR 65
+ EM+P +++ G R+ + C+ +PK + S +K WL + + D L ++
Sbjct: 414 TFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINN 473
Query: 66 VQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKR 124
+ R D G+Y C + A + +++ I + + VG + C S
Sbjct: 474 ITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAASFDPA 533
Query: 125 LSSAKAWLKDGLVLRRN---------------SDEVLVLDRVQREDAGMYQCHIEDGKYH 169
L W +G V+ N ++ L++ Q + AG Y C + +
Sbjct: 534 LDLTFVWSFNGYVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDN 593
Query: 170 MLSSGELII 178
+S +L++
Sbjct: 594 SSASADLVV 602
>sp|Q96MS0|ROBO3_HUMAN Roundabout homolog 3 OS=Homo sapiens GN=ROBO3 PE=1 SV=2
Length = 1386
Score = 67.4 bits (163), Expect = 2e-10, Method: Composition-based stats.
Identities = 89/366 (24%), Positives = 137/366 (37%), Gaps = 89/366 (24%)
Query: 16 SPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV------LVLDRVQRE 69
SP G VVV VG L C + +W KDG L+ + L++ +
Sbjct: 171 SP-GNVVVAVGEPAVLECVPPRGHPEPSVSWRKDGARLKEEEGRITIRGGKLMMSHTLKS 229
Query: 70 DAGMYQC---HVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS---PK 123
DAGMY C +++ + +SA V+ + + V+ D + C V P
Sbjct: 230 DAGMYVCVASNMAGERESAAAEVMVLERPSFLRRPVNQVVLADA--PVTFLCEVKGDPPP 287
Query: 124 RLSSAKAWLKDGLV----LRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIH 179
RL K +DG + SD L + V ED G Y C E+ +SG L +H
Sbjct: 288 RLRWRK---EDGELPTGRYEIRSDHSLWIGHVSAEDEGTYTCVAENSVGRAEASGSLSVH 344
Query: 180 -----------QVDESDRYRSYQCRG---------------------VNKLTGASLLSVN 207
Q+ ++QC L SV+
Sbjct: 345 VPPQLVTQPQDQMAAPGESVAFQCETKGNPPPAIFWQKEGSQVLLFPSQSLQPTGRFSVS 404
Query: 208 -RGRLSLTENKR---------LLSAAKMFEKHRILNVKK--------------------- 236
RG+L++T +R +S A +L +K
Sbjct: 405 PRGQLNITAVQRGDAGYYVCQAVSVAGSILAKALLEIKGASLDGLPPVILQGPANQTLVL 464
Query: 237 DESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ---RIGSSLSISHVEESDSGVWNCVA 293
SV LPC GNP P+++W K+D + D +Q +L I++V+E D G ++CVA
Sbjct: 465 GSSVWLPCRVTGNPQPSVRW-KKDGQWLQGDDLQFKTMANGTLYIANVQEMDMGFYSCVA 523
Query: 294 NNSEGQ 299
+S G+
Sbjct: 524 KSSTGE 529
Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats.
Identities = 80/328 (24%), Positives = 117/328 (35%), Gaps = 91/328 (27%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIA--------SSNQVVVDVGH 112
+V R R D G+Y C V+ + A S L E+A S VVV VG
Sbjct: 128 IVHGRRARPDEGVYTC-VARNYLGAAASRNASL-----EVAVLRDDFRQSPGNVVVAVGE 181
Query: 113 RIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV------LVLDRVQREDAGMYQCHIEDG 166
L C + +W KDG L+ + L++ + DAGMY C +
Sbjct: 182 PAVLECVPPRGHPEPSVSWRKDGARLKEEEGRITIRGGKLMMSHTLKSDAGMYVCVASN- 240
Query: 167 KYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMF 226
M E +V +R S+ R VN++
Sbjct: 241 ---MAGERESAAAEVMVLER-PSFLRRPVNQV---------------------------- 268
Query: 227 EKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDS 286
V D V C +G+P P ++W K+D + R SL I HV D
Sbjct: 269 -------VLADAPVTFLCEVKGDPPPRLRWRKEDGELPTGRYEIRSDHSLWIGHVSAEDE 321
Query: 287 GVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIH---QVDEKNKRLLSAAKMFEKH 343
G + CVA NS G+ + +SG L +H Q+ + + ++A
Sbjct: 322 GTYTCVAENSVGRAE---------------ASGSLSVHVPPQLVTQPQDQMAAP------ 360
Query: 344 RILNVKKDESVILPCSAQGNPLPTIKYR 371
ESV C +GNP P I ++
Sbjct: 361 -------GESVAFQCETKGNPPPAIFWQ 381
Score = 48.9 bits (115), Expect = 6e-05, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 40/216 (18%)
Query: 164 EDGKYH--MLSSGELIIHQVDESDRYRS----YQCRGVNKLTGASLLSVNRGRLSLTENK 217
ED + H +L SG L ++ R R Y C N L A+ + + L ++
Sbjct: 109 EDPRAHRLLLPSGALFFPRIVHGRRARPDEGVYTCVARNYLGAAASRNASLEVAVLRDDF 168
Query: 218 RLLSAAKMFEKHRILNVKKDESVILPC-SAQGNPLPTIKWYKQDSPV-EESDRIQRIGSS 275
R + + V E +L C +G+P P++ W K + + EE RI G
Sbjct: 169 R--------QSPGNVVVAVGEPAVLECVPPRGHPEPSVSWRKDGARLKEEEGRITIRGGK 220
Query: 276 LSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLS 335
L +SH +SD+G++ CVA+N G+ + ++ E+++ + +R ++
Sbjct: 221 LMMSHTLKSDAGMYVCVASNMAGERES--------------AAAEVMVLERPSFLRRPVN 266
Query: 336 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
V D V C +G+P P +++R
Sbjct: 267 QV----------VLADAPVTFLCEVKGDPPPRLRWR 292
Score = 44.3 bits (103), Expect = 0.001, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQD---SPVEESDRIQRI---GSSLS 277
++ E+ L V + E LPC A+G P P I+WYK + V E R R+ +L
Sbjct: 65 RIVEQPPDLLVSRGEPATLPCRAEGRPRPNIEWYKNGARVATVREDPRAHRLLLPSGALF 124
Query: 278 ISHV-----EESDSGVWNCVANNSEG 298
+ D GV+ CVA N G
Sbjct: 125 FPRIVHGRRARPDEGVYTCVARNYLG 150
>sp|P97603|NEO1_RAT Neogenin (Fragment) OS=Rattus norvegicus GN=Neo1 PE=2 SV=1
Length = 1377
Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats.
Identities = 83/346 (23%), Positives = 136/346 (39%), Gaps = 78/346 (22%)
Query: 46 WLKDGLVLRRNSDEV-------------LVLDRVQREDAGMYQCHVSADDDSAQMS--AQ 90
W KDG L SD+ +V + + D G YQC + D+ +S A+
Sbjct: 55 WKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHNKPDEGFYQCVATVDNLGTIVSRTAK 114
Query: 91 VILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDR 150
+ + G + + VG+ L+C V+ + + W +N +L+ DR
Sbjct: 115 LAVAGLPRFTSQPEPSSIYVGNSGILNCEVNADLVPFVR-W-------EQNRQPLLLDDR 166
Query: 151 VQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDR--YRS-YQCRGVNKLTGASLLSVN 207
+ + L SG L+I E D YR + G K + + L V
Sbjct: 167 IVK-----------------LPSGTLVISNATEGDEGLYRCIVESGGPPKFSDEAELKV- 208
Query: 208 RGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDS--PVEE 265
L E++ +L + ++ V +S +LPC A G P P I+W K + E
Sbjct: 209 -----LQESEEMLDLVFLMRPSSMIKVI-GQSAVLPCVASGLPAPVIRWMKNEDVLDTES 262
Query: 266 SDRIQRI-GSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIH 324
S R+ + G SL IS V E D+G + CVA+N G + + EL +
Sbjct: 263 SGRLALLAGGSLEISDVTEDDAGTYFCVADN---------------GNKTIEAQAELTVQ 307
Query: 325 QVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
E K+ A ++ + + ++ C G P PT+K+
Sbjct: 308 VPPEFLKQ---PANIYARESM-------DIVFECEVTGKPAPTVKW 343
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 97/266 (36%), Gaps = 64/266 (24%)
Query: 61 LVLDRVQREDAGMYQCHVSAD-----DDSAQMSAQVILGGE----LVEIASSNQVVVDVG 111
LV+ D G+Y+C V + D A++ +V+ E LV + + ++ +G
Sbjct: 175 LVISNATEGDEGLYRCIVESGGPPKFSDEAEL--KVLQESEEMLDLVFLMRPSSMIKVIG 232
Query: 112 HRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVL--------DRVQREDAGMYQCHI 163
L C V+ + W+K+ VL S L L V +DAG Y C
Sbjct: 233 QSAVLPC-VASGLPAPVIRWMKNEDVLDTESSGRLALLAGGSLEISDVTEDDAGTYFCVA 291
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
++G + + EL + E L A
Sbjct: 292 DNGNKTIEAQAELTVQVPPEF----------------------------------LKQPA 317
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-SLSISHVE 282
++ + + ++ C G P PT+KW K V SD + + +L + +
Sbjct: 318 NIYARESM-------DIVFECEVTGKPAPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLV 370
Query: 283 ESDSGVWNCVANNSEG--QDKMQLFI 306
+SD G + C+A N G Q QL I
Sbjct: 371 KSDEGFYQCIAENDVGNAQAGAQLII 396
Score = 35.8 bits (81), Expect = 0.52, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVE--ESDRIQRI-GSSLSISHVEES-----DSG 287
+ SVIL CSA P P I+W K + + DR Q + SL IS+V S D G
Sbjct: 35 RGSSVILNCSAYSEPSPNIEWKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHNKPDEG 94
Query: 288 VWNCVA 293
+ CVA
Sbjct: 95 FYQCVA 100
Score = 32.3 bits (72), Expect = 5.5, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 27/183 (14%)
Query: 15 MSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVL--------DRV 66
M PS + V +G L C V+ + W+K+ VL S L L V
Sbjct: 222 MRPSSMIKV-IGQSAVLPC-VASGLPAPVIRWMKNEDVLDTESSGRLALLAGGSLEISDV 279
Query: 67 QREDAGMYQCHVSADDDSAQMSAQVILGGELVE--IASSNQVVVDVGHRIELHCRVSPKR 124
+DAG Y C AD+ + + AQ L ++ + + I C V+ K
Sbjct: 280 TEDDAGTYFC--VADNGNKTIEAQAELTVQVPPEFLKQPANIYARESMDIVFECEVTGKP 337
Query: 125 LSSAKAWLKDGLVL---------RRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGE 175
+ K W+K+G V+ + ++ +VL L + D G YQC E+ + + +
Sbjct: 338 APTVK-WVKNGDVVIPSDYFKIVKEHNLQVLGL---VKSDEGFYQCIAENDVGNAQAGAQ 393
Query: 176 LII 178
LII
Sbjct: 394 LII 396
>sp|O15394|NCAM2_HUMAN Neural cell adhesion molecule 2 OS=Homo sapiens GN=NCAM2 PE=1 SV=2
Length = 837
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 81/325 (24%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVV----VDVGHRIEL 116
L + EDAG+Y+C + D A V+L E+ + + +VV G E+
Sbjct: 78 LTIYNANIEDAGIYRCQAT-DAKGQTQEATVVL--EIYQKLTFREVVSPQEFKQGEDAEV 134
Query: 117 HCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGEL 176
CRVS + A +WL +++EV I D ++ ML++ L
Sbjct: 135 VCRVS-SSPAPAVSWL-------YHNEEVTT---------------ISDNRFAMLANNNL 171
Query: 177 IIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLS---AAKMFEKHRILN 233
I +++SD Y+C G + RG + + +++ A M +K
Sbjct: 172 QILNINKSDE-GIYRCEGRVEA---------RGEIDFRDIIVIVNVPPAISMPQKSFNAT 221
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS--LSISHVEESDSGVWNC 291
++ E + C A G+P P I W++ +EE+++ GS+ L++ ++ SD G + C
Sbjct: 222 AERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVC 281
Query: 292 VANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKD 351
A N G+D+ Q F+Q +F + I+ +K +
Sbjct: 282 RATNKAGEDEKQAFLQ-------------------------------VFVQPHIIQLKNE 310
Query: 352 ES-----VILPCSAQGNPLPTIKYR 371
+ V L C A+G P+P I ++
Sbjct: 311 TTYENGQVTLVCDAEGEPIPEITWK 335
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 115/314 (36%), Gaps = 72/314 (22%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVL--------DRVQREDAGMYQCH 77
G E+ CRVS + A +WL + SD + + + D G+Y+C
Sbjct: 129 GEDAEVVCRVS-SSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCE 187
Query: 78 ----VSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLK 133
+ D + V + + S + G + CR S A +W +
Sbjct: 188 GRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRAS-GSPEPAISWFR 246
Query: 134 DGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCR 193
+G ++ N +L S+ EL + + SD Y CR
Sbjct: 247 NGKLIEENEKYIL-----------------------KGSNTELTVRNIINSDG-GPYVCR 282
Query: 194 GVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDES-----VILPCSAQG 248
NK E + L ++F + I+ +K + + V L C A+G
Sbjct: 283 ATNKA-------------GEDEKQAFL---QVFVQPHIIQLKNETTYENGQVTLVCDAEG 326
Query: 249 NPLPTIKWYK--QDSPVEESD-----RIQRIG----SSLSISHVEESDSGVWNCVANNSE 297
P+P I W + E D RI+ G SSL I V+ SDSG ++C A +
Sbjct: 327 EPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRI 386
Query: 298 G--QDKMQLFIQYA 309
G Q M L I+YA
Sbjct: 387 GGHQKSMYLDIEYA 400
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 238 ESVILPCSAQGNPLPTIKWYK-QDSPVEESDRI----QRIGSSLSISHVEESDSGVWNCV 292
ES C+A G P +I WY Q + + R+ + + S L+I + D+G++ C
Sbjct: 36 ESKFFTCTAIGEP-ESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQ 94
Query: 293 ANNSEGQDK 301
A +++GQ +
Sbjct: 95 ATDAKGQTQ 103
>sp|O35136|NCAM2_MOUSE Neural cell adhesion molecule 2 OS=Mus musculus GN=Ncam2 PE=1 SV=1
Length = 837
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 81/325 (24%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVV----VDVGHRIEL 116
L + EDAG+Y+C + D A V+L E+ + + +VV G E+
Sbjct: 78 LTIYNANIEDAGIYRCQAT-DAKGQTQEATVVL--EIYQKLTFREVVSPQEFKQGEDAEV 134
Query: 117 HCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGEL 176
CRVS + A +WL +++EV I D ++ +L++ L
Sbjct: 135 VCRVS-SSPAPAVSWL-------YHNEEVTT---------------IPDNRFAVLANNNL 171
Query: 177 IIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLS---AAKMFEKHRILN 233
I +++SD Y+C G + RG + + +++ A M +K
Sbjct: 172 QILNINKSDE-GIYRCEGRVEA---------RGEIDFRDIIVIVNVPPAIMMPQKSFNAT 221
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS--LSISHVEESDSGVWNC 291
++ E + L C A G+P PTI W++ +EE+++ GS+ L++ ++ D G + C
Sbjct: 222 AERGEEMTLTCKASGSPDPTISWFRNGKLIEENEKYILKGSNTELTVRNIINKDGGSYVC 281
Query: 292 VANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKD 351
A N G+D+ Q F+Q +F + IL +K +
Sbjct: 282 KATNKAGEDQKQAFLQ-------------------------------VFVQPHILQLKNE 310
Query: 352 ES-----VILPCSAQGNPLPTIKYR 371
+ V L C A+G P+P I ++
Sbjct: 311 TTSENGHVTLVCEAEGEPVPEITWK 335
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 123/314 (39%), Gaps = 72/314 (22%)
Query: 26 GHRIELHCRVSPKRLSSAKAWL---KDGLVLRRNSDEVLVLDRVQ-----REDAGMYQCH 77
G E+ CRVS + A +WL ++ + N VL + +Q + D G+Y+C
Sbjct: 129 GEDAEVVCRVS-SSPAPAVSWLYHNEEVTTIPDNRFAVLANNNLQILNINKSDEGIYRCE 187
Query: 78 ----VSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLK 133
+ D + V + ++ S + G + L C+ S +W +
Sbjct: 188 GRVEARGEIDFRDIIVIVNVPPAIMMPQKSFNATAERGEEMTLTCKAS-GSPDPTISWFR 246
Query: 134 DGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCR 193
+G ++ N +L S+ EL + + D SY C+
Sbjct: 247 NGKLIEENEKYIL-----------------------KGSNTELTVRNIINKDG-GSYVCK 282
Query: 194 GVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDES-----VILPCSAQG 248
NK E+++ + ++F + IL +K + + V L C A+G
Sbjct: 283 ATNKAG---------------EDQKQ-AFLQVFVQPHILQLKNETTSENGHVTLVCEAEG 326
Query: 249 NPLPTIKWYKQDSPVEESD-------RIQRIG----SSLSISHVEESDSGVWNCVANNSE 297
P+P I W + V S+ RI+ G SSL I V+ SDSG ++C A +
Sbjct: 327 EPVPEITWKRAIDGVMFSEGDKSPDGRIEVKGQHGRSSLHIRDVKLSDSGRYDCEAASRI 386
Query: 298 G--QDKMQLFIQYA 309
G Q M L I+YA
Sbjct: 387 GGHQRSMHLDIEYA 400
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 238 ESVILPCSAQGNPLPTIKWYK-QDSPVEESDRI----QRIGSSLSISHVEESDSGVWNCV 292
ES C+A G P +I WY Q + + R+ + + S L+I + D+G++ C
Sbjct: 36 ESKFFTCTAIGEP-ESIDWYNPQGEKIISTQRVMLQKEGVRSRLTIYNANIEDAGIYRCQ 94
Query: 293 ANNSEGQDK 301
A +++GQ +
Sbjct: 95 ATDAKGQTQ 103
>sp|Q3V1M1|IGS10_MOUSE Immunoglobulin superfamily member 10 OS=Mus musculus GN=Igsf10 PE=2
SV=2
Length = 2594
Score = 66.6 bits (161), Expect = 3e-10, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 40/215 (18%)
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA 222
I+ ++H+L +G L I +V DR + Y C N L G L V +S
Sbjct: 1666 IQKTRFHVLPNGTLSIQRVSIQDRGQ-YLCAASNPL-GVDHLHVTLSVVSY--------P 1715
Query: 223 AKMFEKH-RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV--EESDRIQRI----GSS 275
A++ E H + + +V L C +G P PTI W + V E + +++ +
Sbjct: 1716 ARILESHVKEITAHSGSTVKLKCRVEGMPRPTISWILANQTVVSETPEGSRKVWVTPDGT 1775
Query: 276 LSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLS 335
L I ++ D G + CVANN GQD + + IQ ++++ +II Q
Sbjct: 1776 LIIHNLSLYDRGFYKCVANNPSGQDSLLVKIQ-------VITAPPVIIEQ---------- 1818
Query: 336 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
++ I+ V ES+ LPC+A+G P P++ +
Sbjct: 1819 -----KRQAIVGV-LGESLKLPCTAKGTPQPSVHW 1847
Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats.
Identities = 88/375 (23%), Positives = 142/375 (37%), Gaps = 61/375 (16%)
Query: 13 IEMSPSGQVVVDVGHRIELHCRVS--PK-----RLSSA---KAWLKDGLVLRRNSDEVLV 62
IE + V++G ++ L+C + PK +L S W + G + + LV
Sbjct: 1914 IETASQKWTEVNLGEKLLLNCSATGDPKPTIIWKLPSKVVIDQWHRMGSRIHVYPNGSLV 1973
Query: 63 LDRVQREDAGMYQC--HVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRV 120
+ V +D G Y C DD M ++ L +E + V G ++ C+
Sbjct: 1974 IGSVTEKDGGDYLCVARNKMGDDLVLMHVRLRLTPAKIEHKQHFKKQVLHGKDFQVDCKA 2033
Query: 121 SPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQ 180
S + L DG V V + Q +D+G +Y + +G L ++
Sbjct: 2034 SGSPVPEVSWSLPDGTV---------VNNVAQADDSGY-----RTKRYTLFHNGTLYFNK 2079
Query: 181 VDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNV--KKDE 238
V ++ Y C N L G+ + + +L+A ++ NV K +
Sbjct: 2080 VGMAEE-GDYICSAQNTL----------GKDEMKVHLTVLTAIPRIRQNYRSNVRIKAGD 2128
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEE--SDR-IQRIGSSLSISHVEESDSGVWNCVANN 295
+ +L C G P P + W + V +DR I +LSI+ V+ DSG + CVA N
Sbjct: 2129 TAVLDCEVTGEPKPNVFWLLPSNNVISFSNDRFIFHANGTLSINKVKPLDSGKYVCVAQN 2188
Query: 296 SEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVI 355
G D K ++S LI K +A + +KH
Sbjct: 2189 PSGDDTKTY-------KLDIVSRPPLINGLYANKTVIKATAIQHSKKH------------ 2229
Query: 356 LPCSAQGNPLPTIKY 370
L C A G P P I +
Sbjct: 2230 LDCRADGVPPPQITW 2244
Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 31/146 (21%)
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI------GSSLSISHVEESD 285
V + V+LPC A G+P PTI W + S E S IQ+ +LSI V D
Sbjct: 1629 FTVPTNSDVLLPCEAVGDPKPTIHWTRVSSGREISRGIQKTRFHVLPNGTLSIQRVSIQD 1688
Query: 286 SGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKH-R 344
G + C A+N G D + + + A++ E H +
Sbjct: 1689 RGQYLCAASNPLGVDHLHVTLSVVS------------------------YPARILESHVK 1724
Query: 345 ILNVKKDESVILPCSAQGNPLPTIKY 370
+ +V L C +G P PTI +
Sbjct: 1725 EITAHSGSTVKLKCRVEGMPRPTISW 1750
Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 44/208 (21%)
Query: 174 GELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMF--EKHRI 231
G LIIH + DR Y+C N G+ SL ++++A + +K +
Sbjct: 1774 GTLIIHNLSLYDR-GFYKCVANNP----------SGQDSLLVKIQVITAPPVIIEQKRQA 1822
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQD----SPVE--ESDRIQRIGSSLSISHVEESD 285
+ ES+ LPC+A+G P P++ W D P++ S +L I ++ S
Sbjct: 1823 IVGVLGESLKLPCTAKGTPQPSVHWVLYDGTELKPLQLTHSRFFLYPNGTLYIRNIVSSV 1882
Query: 286 SGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNK--RLLSAAKMFEKH 343
G + C+A +S G ++ ++I +V+E+ R+ +A++ + +
Sbjct: 1883 RGTYECIATSSSGSER------------------RVVILRVEEQETVPRIETASQKWTE- 1923
Query: 344 RILNVKKDESVILPCSAQGNPLPTIKYR 371
V E ++L CSA G+P PTI ++
Sbjct: 1924 ----VNLGEKLLLNCSATGDPKPTIIWK 1947
Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats.
Identities = 76/309 (24%), Positives = 122/309 (39%), Gaps = 54/309 (17%)
Query: 20 QVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRN---------SDEVLVLDRVQRED 70
+VV VG + ++C V L DG S+ L++ + R
Sbjct: 2317 KVVAQVGKPVAMNCSVDGNPTPEIIWILPDGTQFANGPQNSPYLMASNGSLIVYKATRNK 2376
Query: 71 AGMYQCHVSADDDSAQMSAQVIL--GGELVEIASSNQVVVDVG-HRIELHCRVSPKRLSS 127
+G Y+C +A + + ++L G + V + ++ G + LHC VS
Sbjct: 2377 SGKYRC--TARNKVGYIEKLILLEIGQKPVILTYEPGMIKSAGGESLSLHC-VSDGIPKP 2433
Query: 128 AKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRY 187
W G LV+DR Q GKY + +G L+I + DR
Sbjct: 2434 NVKWTTPG---------GLVIDRPQ-----------VGGKYILHENGTLVIKETTAHDR- 2472
Query: 188 RSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQ 247
+Y C+ N + G +++SV ++ R+++ R + + E++ L C A
Sbjct: 2473 GNYICKAQNSV-GQAVISVPVTIVAYP--PRIINYLP-----RSMLRRTGEAMQLHCVAL 2524
Query: 248 GNPLPTIKW----YKQDSPVEESDRIQR-----IGSSLSISHVEESDSGVWNCVANNSEG 298
G P P I W Y S E R R + +L I ++ SDSGV+ C A N G
Sbjct: 2525 GVPKPQITWETPGYSLLSTATER-RPHRSEMLPLQGTLVIQNLRASDSGVYKCRAQNVLG 2583
Query: 299 QDKMQLFIQ 307
D +IQ
Sbjct: 2584 ADYATTYIQ 2592
Score = 35.0 bits (79), Expect = 1.0, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 36/210 (17%)
Query: 166 GKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKM 225
G+ + +G L I + SD + C V G S+L V +L + E R +
Sbjct: 2259 GRITVHQNGTLEIRNIRLSDS-ADFTCV-VRSEGGESVLVV---QLKVLEMLRRPTFRNP 2313
Query: 226 FEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV-----EESDRIQRIGSSLSISH 280
F + + V K V + CS GNP P I W D + S + SL +
Sbjct: 2314 FNEKVVAQVGK--PVAMNCSVDGNPTPEIIWILPDGTQFANGPQNSPYLMASNGSLIVYK 2371
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
+ SG + C A N G +I+ +LI+ ++ +K L M
Sbjct: 2372 ATRNKSGKYRCTARNKVG------YIE------------KLILLEIGQKPVILTYEPGMI 2413
Query: 341 EKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+ ES+ L C + G P P +K+
Sbjct: 2414 KS------AGGESLSLHCVSDGIPKPNVKW 2437
Score = 34.3 bits (77), Expect = 1.5, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 12/140 (8%)
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
EDG+ + G+L + D D Y C N A +L+ R+++ E
Sbjct: 524 EDGRILIDKKGKLELQMADTFDA-GLYHCISTND-ADADILTY---RITVVEP----YVE 574
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKW-YKQDSPVEESDRIQRI--GSSLSISH 280
E + V E + LPC + G P +I W +++ +S R +I +L I
Sbjct: 575 NKHENGALHTVIMGEILDLPCLSTGIPDASISWILPRNTVFSQSSRDMQILNNGTLRILQ 634
Query: 281 VEESDSGVWNCVANNSEGQD 300
D G + CVA N G D
Sbjct: 635 ATPKDQGHYRCVAANPSGAD 654
Score = 32.7 bits (73), Expect = 4.4, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 18/101 (17%)
Query: 239 SVILPCSAQGNPLPTIKWYKQDSP------VEESDR--IQRIGSSLSISHVEESDSGVWN 290
++ L C +G+P P ++W D V E R I + G L + + D+G+++
Sbjct: 492 TIALDCPGKGDPSPHLEWVLADGSKVRAPYVSEDGRILIDKKG-KLELQMADTFDAGLYH 550
Query: 291 CVANNSEGQDKMQLFI---------QYAHGKYHMLSSGELI 322
C++ N D + I ++ +G H + GE++
Sbjct: 551 CISTNDADADILTYRITVVEPYVENKHENGALHTVIMGEIL 591
>sp|Q4VA61|DSCL1_MOUSE Down syndrome cell adhesion molecule-like protein 1 homolog OS=Mus
musculus GN=Dscaml1 PE=1 SV=2
Length = 2053
Score = 66.6 bits (161), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
+ ++ + S G L I V + D +Y+C +K +G + S N RLS+T+ S
Sbjct: 171 ENRFFITSHGGLYISDVQKEDALSTYRCITQHKYSGETRQS-NGARLSVTDPAE--SIPT 227
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEES 284
+ + V SV LPC+A G P+P I+W K P+ R + + L+IS +
Sbjct: 228 ILDGFHSQEVWTGHSVELPCAASGYPIPAIRWLKDGRPLPADSRWAKRITGLTISDLRTE 287
Query: 285 DSGVWNCVANNSEG 298
DSG + C N+ G
Sbjct: 288 DSGTYICEVTNTFG 301
Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats.
Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 62/299 (20%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV-----LVLDRVQREDAGMYQCHVSA 80
GH +EL C S + + + WLKDG L +S L + ++ ED+G Y C V+
Sbjct: 240 GHSVELPCAASGYPIPAIR-WLKDGRPLPADSRWAKRITGLTISDLRTEDSGTYICEVTN 298
Query: 81 DDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVL-- 138
SA+ + + + L + ++ +G + L C ++ + + + LVL
Sbjct: 299 TFGSAEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPG 358
Query: 139 -----RRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCR 193
R S+E L++ Q+ +G YQC + R
Sbjct: 359 EAISIRGLSNETLLISSAQKSHSGAYQC----------------------------FATR 390
Query: 194 GVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPT 253
+++ + G R++S+ +++N E L C+A+G P PT
Sbjct: 391 KAQTAQDFAIIVLEDG------TPRIVSSF----SEKVVN--PGEQFSLMCAAKGAPPPT 438
Query: 254 IKWYKQDSPV--EESDRIQR--IGSSLSISHVEES-----DSGVWNCVANNSEGQDKMQ 303
+ W D PV + S R + + +ISH+ + D GV+ C A NS G + Q
Sbjct: 439 VTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEYQ 497
Score = 52.0 bits (123), Expect = 8e-06, Method: Composition-based stats.
Identities = 75/330 (22%), Positives = 130/330 (39%), Gaps = 90/330 (27%)
Query: 61 LVLDRVQREDA-GMYQC---HVSADDDSAQMSAQVILGGELVEIASSNQVVVD------- 109
L + VQ+EDA Y+C H + + A++ + + A S ++D
Sbjct: 182 LYISDVQKEDALSTYRCITQHKYSGETRQSNGARL----SVTDPAESIPTILDGFHSQEV 237
Query: 110 -VGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV-----LVLDRVQREDAGMYQCHI 163
GH +EL C S + + + WLKDG L +S L + ++ ED+G Y C +
Sbjct: 238 WTGHSVELPCAASGYPIPAIR-WLKDGRPLPADSRWAKRITGLTISDLRTEDSGTYICEV 296
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
++ + S + G+ L ++ ++LT K
Sbjct: 297 --------------------TNTFGSAEANGI-------LTVIDPLHVTLTPKK------ 323
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS---LSISH 280
L +VIL C+ G+P TI+WY+ V + I G S L IS
Sbjct: 324 --------LKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEAISIRGLSNETLLISS 375
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
++S SG + C A K Q ++ + I +++ R++S+
Sbjct: 376 AQKSHSGAYQCFATR-----KAQ-------------TAQDFAIIVLEDGTPRIVSSF--- 414
Query: 341 EKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+++N E L C+A+G P PT+ +
Sbjct: 415 -SEKVVN--PGEQFSLMCAAKGAPPPTVTW 441
Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 238 ESVILPCSAQGNPLPTIKWYK--QDSPVEES---DRIQRIGSSLSISHVEESDSGVWNCV 292
+ V LPC++ G+P P +KW K +DS + S R+ +L + V+ DSG + C
Sbjct: 1305 KDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSLDGHRLIHTNGTLLLRAVKAEDSGYYTCT 1364
Query: 293 ANNSEGQDKM--QLFIQ 307
A N+ G D + L +Q
Sbjct: 1365 ATNTGGFDTIIVNLLVQ 1381
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 109/303 (35%), Gaps = 71/303 (23%)
Query: 67 QREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLS 126
Q D G+Y+C SA+ A++ + G I + + G ++CRV
Sbjct: 476 QIRDGGVYRCTARNSVGSAEYQARINVRGP-PSIRAMRNITAVAGRDTLINCRVIGYPYY 534
Query: 127 SAKAWLKDGLVLRRNSDEV------LVLDRVQR-EDAGMY--------QCHIEDGKY--- 168
S K W KD L+L N +V L L VQ+ D G Y Q I +
Sbjct: 535 SIK-WYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAV 593
Query: 169 -----------------------HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLS 205
++SSG++ I D GV + + S
Sbjct: 594 KVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSS 653
Query: 206 VNRGRLSLTENKRLL----SAAKMFEKHRILNVK---------------KDESVILPCSA 246
+ +SL N +AA + R L V+ ++ +L CS
Sbjct: 654 LQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSV 713
Query: 247 QGNPLPTIKWY--------KQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNCVANNSE 297
G P P + W +Q PV + RIQ + SSL I HV E D G + C A+N
Sbjct: 714 DGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGV 773
Query: 298 GQD 300
G D
Sbjct: 774 GTD 776
Score = 41.6 bits (96), Expect = 0.011, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 38/215 (17%)
Query: 49 DGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASS-NQVV 107
+ + +R S+E L++ Q+ +G YQC + +AQ A ++L I SS ++ V
Sbjct: 359 EAISIRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKV 418
Query: 108 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGK 167
V+ G + L C + W D DE +V D R + Q + DG
Sbjct: 419 VNPGEQFSLMCAAKGAPPPTV-TWALD--------DEPVVRDGSHRTN----QYTMSDGT 465
Query: 168 Y--HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLS-VN-RGRLSLTENKRLLSAA 223
HM +G Q+ + YR C N + A + +N RG S+ + + + A
Sbjct: 466 TISHMNVTGP----QIRDGGVYR---CTARNSVGSAEYQARINVRGPPSIRAMRNITAVA 518
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYK 258
++ C G P +IKWYK
Sbjct: 519 -------------GRDTLINCRVIGYPYYSIKWYK 540
Score = 36.6 bits (83), Expect = 0.35, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 32/159 (20%)
Query: 166 GKYHMLSSGELIIHQVDESDRYRSYQCRGVN----KLTGASLLSVNRGRLSLTENKRLLS 221
G+ +L + L+I V E D Y C+ N ++ A L+V + +T +
Sbjct: 742 GRIQILPNSSLLIRHVLEED-IGYYLCQASNGVGTDISKAMFLTVKIPAM-ITSHPNTTI 799
Query: 222 AAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQR---------- 271
A K K L C+A+G I+W K D+ V + DR+ R
Sbjct: 800 AIKGHPKE------------LNCTARGERPIIIRWEKGDT-VIDPDRVMRYAIATKDNGD 846
Query: 272 -IGSSLSISHVEESDSGVWNCVANNSEGQDK--MQLFIQ 307
+ S+L + + DS ++C A NS G+D+ +QL +Q
Sbjct: 847 EVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQ 885
>sp|P97528|CNTN6_RAT Contactin-6 OS=Rattus norvegicus GN=Cntn6 PE=1 SV=1
Length = 1028
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 131/325 (40%), Gaps = 78/325 (24%)
Query: 50 GLVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASS------ 103
G V NS L + + Q+ED G Y+C + + + + G+L+ A
Sbjct: 271 GKVKYSNSQATLEIPKFQQEDEGFYECV------AGNLRGRNLAKGQLIFYAPPEWEQKI 324
Query: 104 NQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHI 163
+ + + C+ S + + WLK+G R N++E R+Q E+
Sbjct: 325 QNTYLSIYDSLFWECKAS-GNPNPSYTWLKNGE--RLNTEE-----RIQTEN-------- 368
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
G LII ++ SD YQC NK + R+L++A
Sbjct: 369 ----------GTLIITMLNVSDS-GIYQCAAENKYQ----------TIYANAELRVLASA 407
Query: 224 KMFEKH---RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSIS 279
F K+ +I V+ + + C P +I W + +++S R+ + SL I
Sbjct: 408 PDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKIC 467
Query: 280 HVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKM 339
+V SD+G + CVA N Q+ +GK SSG LI V E+ + +KM
Sbjct: 468 NVTRSDAGSYTCVATN-----------QFGNGK----SSGSLI---VKERTVITVPPSKM 509
Query: 340 FEKHRILNVKKDESVILPCSAQGNP 364
+V ES++LPC +P
Sbjct: 510 -------DVTVGESIVLPCQVSHDP 527
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 121/313 (38%), Gaps = 65/313 (20%)
Query: 69 EDAGMYQCHVSADDDS-----AQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPK 123
+D G+YQC + + A++ I E E S + V V G + L C P
Sbjct: 93 QDIGIYQCLATNPVGTILSRKAKLQFAYI---EDFETKSRSTVSVREGQGVVLLCGPPPH 149
Query: 124 RLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDE 183
+ W + D L + +R ++ ++G L I +V+
Sbjct: 150 FGELSYDWTFN--------DNPLYVQEDKR-------------RFVSQNTGNLYIAKVEP 188
Query: 184 SDRYRSYQCRGVNK-----LTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDE 238
SD +Y C NK + G V R + E + + + KD
Sbjct: 189 SD-VGNYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEV----RFPETIQAAKDS 243
Query: 239 SVILPCSAQGNPLPTIKWYKQD-SPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSE 297
SV L C A GNP+P I W + D SP+ + ++L I ++ D G + CVA N
Sbjct: 244 SVKLECFALGNPVPDISWRRLDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVAGNLR 303
Query: 298 GQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILP 357
G++ L+ G+LI + E +++ ++ L++ +S+
Sbjct: 304 GRN---------------LAKGQLIFYAPPEWEQKI--------QNTYLSIY--DSLFWE 338
Query: 358 CSAQGNPLPTIKY 370
C A GNP P+ +
Sbjct: 339 CKASGNPNPSYTW 351
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 22/177 (12%)
Query: 22 VVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLD-------RVQREDAGMY 74
VV VG I + C+ P A K G + S V L+ V R DAG Y
Sbjct: 420 VVQVGGDISIECK--PNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGSY 477
Query: 75 QCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKRLSSAKAWLK 133
C + + + S +I+ V +++ V VG I L C+VS + W
Sbjct: 478 TCVATNQFGNGKSSGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYF 537
Query: 134 DGLVL----------RRNSDEV--LVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+G V+ R + V L++ +Q +G Y C ++ + + ++I+
Sbjct: 538 NGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 594
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ-RI-GSSLSISHV-EESDSGV 288
L++ + E +IL C+A G P P +W + + ++ S R+ G SL+IS + D G+
Sbjct: 39 LDLSRSE-IILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLDGGSLAISSPRTDQDIGI 97
Query: 289 WNCVANNSEG 298
+ C+A N G
Sbjct: 98 YQCLATNPVG 107
>sp|P13591|NCAM1_HUMAN Neural cell adhesion molecule 1 OS=Homo sapiens GN=NCAM1 PE=1 SV=3
Length = 858
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 154/402 (38%), Gaps = 104/402 (25%)
Query: 3 LFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG------------ 50
F+ SL +++ PS Q + VG C+V+ +W
Sbjct: 12 FFLGTAVSLQVDIVPS-QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLTPNQQRIS 70
Query: 51 LVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDV 110
+V +S L + +DAG+Y+C V+ +D S S V V +
Sbjct: 71 VVWNDDSSSTLTIYNANIDDAGIYKCVVTGEDGSE----------------SEATVNVKI 114
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHI------- 163
++ +P+ R D V+V D V + H
Sbjct: 115 FQKLMFKNAPTPQEF-------------REGEDAVIVCDVVSSLPPTIIWKHKGRDVILK 161
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
+D ++ +LS+ L I + ++D +Y+C G +L+ RG ++ + + +++
Sbjct: 162 KDVRFIVLSNNYLQIRGIKKTDE-GTYRCEG-------RILA--RGEINFKDIQVIVNVP 211
Query: 224 KMFE-KHRILNVKKD--ESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-----GSS 275
+ + I+N + +SV L C A+G P PT+ W K +E+ + ++ S
Sbjct: 212 PTIQARQNIVNATANLGQSVTLVCDAEGFPEPTMSWTKDGEQIEQEEDDEKYIFSDDSSQ 271
Query: 276 LSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLS 335
L+I V+++D + C+A N G+ + +
Sbjct: 272 LTIKKVDKNDEAEYICIAENKAGEQDATIHL----------------------------- 302
Query: 336 AAKMFEKHRILNVKK------DESVILPCSAQGNPLPTIKYR 371
K+F K +I V+ +E V L C A G+P+P+I +R
Sbjct: 303 --KVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWR 342
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 34/159 (21%)
Query: 173 SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRIL 232
S +L I +VD++D Y C NK G T + ++ + K+
Sbjct: 269 SSQLTIKKVDKNDEAE-YICIAENKA----------GEQDATIHLKVFAKPKITYVENQT 317
Query: 233 NVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ--------------------RI 272
++ +E V L C A G+P+P+I W + ++ R+
Sbjct: 318 AMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRPEKQETLDGHMVVRSHARV 377
Query: 273 GSSLSISHVEESDSGVWNCVANNSEGQD--KMQLFIQYA 309
SSL++ ++ +D+G + C A+N+ GQD M L +QYA
Sbjct: 378 -SSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYA 415
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 116/330 (35%), Gaps = 92/330 (27%)
Query: 21 VVVDVGHRIELHCRVS--PKRLSSAKAWLKDG-----------LVLRRNSDEVLVLDRVQ 67
++G + L C P+ S W KDG + +S + L + +V
Sbjct: 223 ATANLGQSVTLVCDAEGFPEPTMS---WTKDGEQIEQEEDDEKYIFSDDSSQ-LTIKKVD 278
Query: 68 REDAGMYQC--HVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHC------- 118
+ D Y C A + A + +V ++ + NQ +++ ++ L C
Sbjct: 279 KNDEAEYICIAENKAGEQDATIHLKVFAKPKITYV--ENQTAMELEEQVTLTCEASGDPI 336
Query: 119 -----RVSPKRLSSAK--AWLK-------DGLVLRRNSDEV--LVLDRVQREDAGMYQCH 162
R S + +SS + +W + DG ++ R+ V L L +Q DAG Y C
Sbjct: 337 PSITWRTSTRNISSEEKASWTRPEKQETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICT 396
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA 222
+ I Q D Y Q KL G + G
Sbjct: 397 ASN-----------TIGQ-DSQSMYLEVQY--APKLQGPVAVYTWEGN------------ 430
Query: 223 AKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ-RIGSSLSISHV 281
V + C P TI W++ + S+ +I ++ S S++
Sbjct: 431 ----------------QVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYL 474
Query: 282 E-----ESDSGVWNCVANNSEGQDKMQLFI 306
E E+D G +NC A N GQ+ ++ +
Sbjct: 475 EVTPDSENDFGNYNCTAVNRIGQESLEFIL 504
>sp|Q12860|CNTN1_HUMAN Contactin-1 OS=Homo sapiens GN=CNTN1 PE=1 SV=1
Length = 1018
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 97/249 (38%), Gaps = 51/249 (20%)
Query: 56 NSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIE 115
S VL + +Q ED G+Y+C + A++ + + N VD+G +
Sbjct: 290 TSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLY 349
Query: 116 LHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGE 175
C + K + + + WLK+G + L L V E+AGMYQC E+ + ++ E
Sbjct: 350 WPCVATGKPIPTIR-WLKNGYAYHKGE---LRLYDVTFENAGMYQCIAENTYGAIYANAE 405
Query: 176 LIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFE----KHRI 231
L ++L+ A FE K +I
Sbjct: 406 L-----------------------------------------KILALAPTFEMNPMKKKI 424
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWN 290
L K VI+ C + P P W K + S RI SL I+++ +D G++
Sbjct: 425 LAAKGGR-VIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYT 483
Query: 291 CVANNSEGQ 299
C A N+ G+
Sbjct: 484 CFAENNRGK 492
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 26/199 (13%)
Query: 172 SSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRI 231
++G L I V+ SD+ +Y C + S+ S + + E A + + +
Sbjct: 192 TNGNLYIANVEASDK-GNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNC 291
+ ++V L C A GNP+P I+W K P+ + I G+ L I +++ D G++ C
Sbjct: 251 VYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYEC 310
Query: 292 VANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKD 351
A N G+DK Q + ++ + E + H D + +++ D
Sbjct: 311 EAENIRGKDKHQ-------ARIYVQAFPEWVEHINDTE----------------VDIGSD 347
Query: 352 ESVILPCSAQGNPLPTIKY 370
+ PC A G P+PTI++
Sbjct: 348 --LYWPCVATGKPIPTIRW 364
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 23 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADD 82
VD+G + C + K + + + WLK+G + L L V E+AGMYQC A++
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIR-WLKNGYAYHKGE---LRLYDVTFENAGMYQC--IAEN 395
Query: 83 DSAQMSAQVILGGELVEIASS-------NQVVVDVGHRIELHCR--VSPK-RLSSAKA-- 130
+ A L +++ +A + +++ G R+ + C+ +PK + S +K
Sbjct: 396 TYGAIYANAEL--KILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTE 453
Query: 131 WLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
WL + + D L ++ + R D G+Y C E+ + S+G L+I
Sbjct: 454 WLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVI 501
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 223 AKMFEKHRILNVKKDES----VILPCSAQGNPLPTIKWYKQDSPVE-ESDRIQRIGSSLS 277
+FE+ I + +ES V L C A+ +P P KW + V+ SDR +G +L
Sbjct: 40 GPIFEEQPINTIYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 278 ISHVE-ESDSGVWNCVANNSEG 298
I++ + + D+G++ C+A+N+ G
Sbjct: 100 INNPDKQKDAGIYYCLASNNYG 121
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 12 SIEMSP-SGQVVVDVGHRIELHCR--VSPK-RLSSAKA--WLKDGLVLRRNSDEVLVLDR 65
+ EM+P +++ G R+ + C+ +PK + S +K WL + + D L ++
Sbjct: 414 TFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINN 473
Query: 66 VQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS-PKR 124
+ R D G+Y C + A + +++ I + + VG + C S
Sbjct: 474 ITRNDGGIYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPA 533
Query: 125 LSSAKAWLKDGLVLRRNSDEV-------------LVLDRVQREDAGMYQCHIEDGKYHML 171
L W +G V+ N + + L++ Q + AG Y C + +
Sbjct: 534 LDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSS 593
Query: 172 SSGELII 178
+S +L++
Sbjct: 594 ASADLVV 600
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 38/132 (28%)
Query: 243 PCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKM 302
PC A G P+PTI+W K + + L + V ++G++ C+A N+ G
Sbjct: 351 PCVATGKPIPTIRWLKNGYAYHKGE--------LRLYDVTFENAGMYQCIAENTYGA--- 399
Query: 303 QLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFE----KHRILNVKKDESVILPC 358
+ ++ EL ++L+ A FE K +IL K VI+ C
Sbjct: 400 ------------IYANAEL----------KILALAPTFEMNPMKKKILAAKGGR-VIIEC 436
Query: 359 SAQGNPLPTIKY 370
+ P P +
Sbjct: 437 KPKAAPKPKFSW 448
>sp|Q61006|MUSK_MOUSE Muscle, skeletal receptor tyrosine-protein kinase OS=Mus musculus
GN=Musk PE=1 SV=1
Length = 868
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 40/210 (19%)
Query: 165 DGKYHMLSSGELI-IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
D +Y + +G+L+ I V++SD Y C N + GA + G L + ++
Sbjct: 72 DTRYSIRENGQLLTILSVEDSDD-GIYCCIANNGVGGAV---ESCGALQVKMKPKITRPP 127
Query: 224 KMFEKHRILNVKKDESV--ILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-SLSISH 280
+NVK E + +LPC+ GNP P++ W K D+ + E+ RI + S SL I +
Sbjct: 128 --------INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDNALRENSRIAVLESGSLRIHN 179
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
V++ D+G + CVA NS G Y L E+ E R+L A
Sbjct: 180 VQKEDAGQYRCVAKNSLGT------------AYSKLVKLEV------EVFARILRAP--- 218
Query: 341 EKHRILNVKKDESVILPCSAQGNPLPTIKY 370
E H NV V L C+A G P+PTI +
Sbjct: 219 ESH---NVTFGSFVTLRCTAIGIPVPTISW 245
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
E+ + +L SG L IH V + D + Y+C N L A V +L + R+L A
Sbjct: 163 ENSRIAVLESGSLRIHNVQKEDAGQ-YRCVAKNSLGTAYSKLV---KLEVEVFARILRAP 218
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV-----EESDRIQRIGSSLSI 278
E H NV V L C+A G P+PTI W + + V +ES + + I S L +
Sbjct: 219 ---ESH---NVTFGSFVTLRCTAIGIPVPTISWIENGNAVSSGSIQESVKDRVIDSRLQL 272
Query: 279 SHVEESDSGVWNCVANNSEGQ 299
+ G++ C+A N G+
Sbjct: 273 FI---TKPGLYTCIATNKHGE 290
Score = 32.0 bits (71), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRV--SPKRLSSAKAWLKDGLVLRRNSDEVLV 62
+QVK I P +++ G + L C +PK + +W+K LR NS + V
Sbjct: 115 LQVKMKPKITRPPINVKIIE-GLKAVLPCTTMGNPK---PSVSWIKGDNALRENS-RIAV 169
Query: 63 LD-------RVQREDAGMYQCHVSADDDSAQMSAQVILGGELVE--IASSNQVVVDVGHR 113
L+ VQ+EDAG Y+C V+ + S V L E+ + + V G
Sbjct: 170 LESGSLRIHNVQKEDAGQYRC-VAKNSLGTAYSKLVKLEVEVFARILRAPESHNVTFGSF 228
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQRE-------DAGMYQC 161
+ L C + + +W+++G + S + V DRV G+Y C
Sbjct: 229 VTLRCTAIGIPVPTI-SWIENGNAVSSGSIQESVKDRVIDSRLQLFITKPGLYTC 282
>sp|P16170|NCA11_XENLA Neural cell adhesion molecule 1-A OS=Xenopus laevis GN=ncam1-a PE=2
SV=1
Length = 1088
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 44/214 (20%)
Query: 165 DGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAK 224
D ++ +L++ L I + ++D +Y+C G +L+ RG ++ + + +++
Sbjct: 160 DVRFVVLANNYLQIRGIKKTDE-GTYRCEG-------RILA--RGEINYKDIQVIVNVPP 209
Query: 225 MFEKHRI-LNVKKD--ESVILPCSAQGNPLPTIKWYKQDSPVEESDR---IQRIGSSLSI 278
+ ++ +N + ESV+L C A G P P I W K+ P+E+ + S ++I
Sbjct: 210 TIQARQLRVNATANMAESVVLSCDADGFPDPEISWLKKGEPIEDGEEKISFNEDQSEMTI 269
Query: 279 SHVEESDSGVWNCVANNSEGQDKMQLFIQ-YAHGKYHMLSSGELIIHQVDEKNKRLLSAA 337
HVE+ D ++C+ANN G+ + + ++ YA K I V+ K
Sbjct: 270 HHVEKDDEAEYSCIANNQAGEAEATILLKVYAKPK----------ITYVENKTA------ 313
Query: 338 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKYR 371
V+ DE + L C A G+P+P+I +R
Sbjct: 314 ----------VELDE-ITLTCEASGDPIPSITWR 336
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 82/339 (24%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDG--LVLRRN------ 56
+++ L+ + +P+ Q + G + C VS + S W G ++ +++
Sbjct: 109 LKIYQKLTFKNAPTPQEFKE-GEDAVIICDVS-SSIPSIITWRHKGKDVIFKKDVRFVVL 166
Query: 57 SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIEL 116
++ L + +++ D G Y+C +++ GE+ QV+V+V I+
Sbjct: 167 ANNYLQIRGIKKTDEGTYRCE-----------GRILARGEIN--YKDIQVIVNVPPTIQA 213
Query: 117 -HCRVSPKRLSSAKAWLKDGLVLRRNSD-----EVLVLDRVQREDAGMYQCHIEDGKYHM 170
RV+ A A + + +VL ++D E+ L + + IEDG+ +
Sbjct: 214 RQLRVN------ATANMAESVVLSCDADGFPDPEISWLKKGEP---------IEDGEEKI 258
Query: 171 L---SSGELIIHQVDESDRYRSYQCRGVNKLTGAS---LLSV-NRGRLSLTENKRLLSAA 223
E+ IH V++ D Y C N+ A LL V + +++ ENK
Sbjct: 259 SFNEDQSEMTIHHVEKDDEAE-YSCIANNQAGEAEATILLKVYAKPKITYVENKTA---- 313
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQ-----------DSPVEESDRIQRI 272
V+ DE + L C A G+P+P+I W D + + I+
Sbjct: 314 ----------VELDE-ITLTCEASGDPIPSITWRTAVRNISSEATTLDGHIVVKEHIRM- 361
Query: 273 GSSLSISHVEESDSGVWNCVANNSEGQDKMQLF--IQYA 309
S+L++ ++ +D+G + C+A+N G D ++ +QYA
Sbjct: 362 -SALTLKDIQYTDAGEYFCIASNPIGVDMQAMYFEVQYA 399
>sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans
GN=unc-89 PE=1 SV=3
Length = 8081
Score = 65.1 bits (157), Expect = 9e-10, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 59/319 (18%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVV---VDVGHRIELH 117
LV+ + DAG Y S +A+ SA+ + L + ++V V + L
Sbjct: 3247 LVVKQAATTDAGKYTAKASNPAGTAESSAEAEVTQSLEKPTFVRELVTTEVKINETATLS 3306
Query: 118 CRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELI 177
V S + WLKDG ++ +S V+ + E +G Y I+D + + SG+
Sbjct: 3307 VTVKGVPDPSVE-WLKDGQPVQTDSSHVIA----KVEGSGSYSITIKDAR--LEDSGK-- 3357
Query: 178 IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKD 237
Y CR N A ++ +N L + EK L VK+
Sbjct: 3358 ------------YACRATNPAGEAK----TEANFAVVKN---LVPPEFVEKLSPLEVKEK 3398
Query: 238 ESVILPCSAQGNPLPTIKWYKQDSP--VEESDRIQR---IGS-SLSISHVEESDSGVWNC 291
ES L G P P+++W+K D+P ++ IQ+ +GS SL+I+ + D G+++C
Sbjct: 3399 ESTTLSVKVVGTPEPSVEWFKDDTPISIDNVHVIQKQTAVGSFSLTINDARQGDVGIYSC 3458
Query: 292 VANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKD 351
A N G+ L++ I R + +K R L V++
Sbjct: 3459 RARNEAGE---------------ALTTANFGI-------IRDSIPPEFTQKLRPLEVREQ 3496
Query: 352 ESVILPCSAQGNPLPTIKY 370
E++ L + G P+P +++
Sbjct: 3497 ETLDLKVTVIGTPVPNVEW 3515
Score = 62.8 bits (151), Expect = 4e-09, Method: Composition-based stats.
Identities = 90/382 (23%), Positives = 146/382 (38%), Gaps = 63/382 (16%)
Query: 23 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNS-----DEV------LVLDRVQREDA 71
V +G+ I+L C+V+ S K W KDG L +S +E L + D
Sbjct: 5606 VSLGNVIDLECKVTGLPNPSVK-WSKDGGPLIEDSRFEWSNEASKGVYQLRIKNATVHDE 5664
Query: 72 GMYQCHVSADDDSAQMSAQVI----LGGELVEIASSNQVVVDVG-------HRIELHCRV 120
G Y+C + ++ SA + V LG +V + + + +G ++L C+V
Sbjct: 5665 GTYRCVATNENGSATTKSFVRMDDGLGSGVVTASQPPRFTLKMGDVRTTEGQPLKLECKV 5724
Query: 121 SPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQC-HIEDGKYHMLSSGELIIH 179
L W KDG ++ + + L + C + +DG Y ++++
Sbjct: 5725 DASPLPEM-VWYKDGAIVTPSDRIQISLSPDGVATLLIPSCVYDDDGIYRVIAT------ 5777
Query: 180 QVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDES 239
+ S + V KL S + R NK A K+ E + + + +S
Sbjct: 5778 --NPSGTAQDKGTATVKKLPRDSGARRSADRDVFDANK----APKLMEPLENIRIPEKQS 5831
Query: 240 VILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-----SLSISHVEESDSGVWNCVAN 294
L C G+P PTIKW+K V R+Q I S L + D+G + CVA
Sbjct: 5832 FRLRCKFSGDPKPTIKWFKDGERVFPYGRLQLIESPDGVCELVVDSATRQDAGGYRCVAE 5891
Query: 295 NSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAK------MFEKHRILNV 348
N+ G + + G D K + + S+ + I
Sbjct: 5892 NTYGSARTSCDVNVIRG---------------DRKPRDIDSSIREGKAPGFTTPLTIRRA 5936
Query: 349 KKDESVILPCSAQGNPLPTIKY 370
K +SV C GNP P+IK+
Sbjct: 5937 KPGDSVTFECLPFGNPFPSIKW 5958
Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats.
Identities = 81/343 (23%), Positives = 132/343 (38%), Gaps = 66/343 (19%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGEL---VEIASSNQVVVDVGHRIELH 117
L + + + ED G+Y C + + A+ +A + + E+ + + V+ G EL
Sbjct: 3541 LTIKQARGEDVGVYTCKATNEAGEAKTTANMAVQEEIEAPLFVQGLKPYEVEQGKPAELV 3600
Query: 118 CRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELI 177
RV K K W KDG+ + ++ V+ E G E+G S L+
Sbjct: 3601 VRVEGKPEPEVK-WFKDGVPIAIDNQHVI-------EKKG------ENG------SHTLV 3640
Query: 178 IHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVK-- 235
I + +D + Y C+ NK + G L + + FEK VK
Sbjct: 3641 IKDTNNAD-FGKYTCQATNKAGKDETV----GELKIPKYS--------FEKQTAEEVKPL 3687
Query: 236 -----------KDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ----RIGS-SLSIS 279
+ ++V+L C P IK++K D PVE +Q G+ L+I
Sbjct: 3688 FIEPLKETFAVEGDTVVLECKVNKESHPQIKFFKNDQPVEIGQHMQLEVLEDGNIKLTIQ 3747
Query: 280 HVEESDSGVWNCVANNSEGQ--DKMQLFIQYA----------HGKYHMLSSGELIIHQVD 327
+ ++ D G + C A N G+ L IQ+A G+ + E +
Sbjct: 3748 NAKKEDVGAYRCEAVNVAGKANTNADLKIQFAAKVEEHVTDESGQLEEIGQFETVGDTAS 3807
Query: 328 EKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
K A + E R V + + IL C +G P P IK+
Sbjct: 3808 SKTDTGRGAPEFVELLRSCTVTEKQQAILKCKVKGEPRPKIKW 3850
Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 48/250 (19%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVI--------LGGELVE-IASSNQVVVDVG 111
L D V + DAG Y+C + SA +I + GE + + VV VG
Sbjct: 3875 LTFDNVTQADAGEYRCEAENEYGSAWTEGPIIVTLEGAPKIDGEAPDFLQPVKPAVVTVG 3934
Query: 112 HRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHML 171
L ++S K S K W K+G +E+ DRV+ E+ ++DG +
Sbjct: 3935 ETAVLEGKISGKPKPSVK-WYKNG-------EELKPSDRVKIEN-------LDDGTQRLT 3979
Query: 172 SSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRI 231
+ ++D+ D YR C N+ ++LT + A F++
Sbjct: 3980 VTNA----KLDDMDEYR---CEASNEFGDV------WSDVTLTVKEPAQVAPGFFKELSA 4026
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNC 291
+ VK+ E+ C G P +KW+K +P++E R+ H E +D G
Sbjct: 4027 IQVKETETAKFECKVSGTK-PDVKWFKDGTPLKEDKRV----------HFESTDDGTQRL 4075
Query: 292 VANNSEGQDK 301
V +S+ D+
Sbjct: 4076 VIEDSKTDDQ 4085
Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/277 (24%), Positives = 100/277 (36%), Gaps = 74/277 (26%)
Query: 111 GHRIELHCRVSPKRLSSAKAWLKDG----LVLR-----RNSDE-----VLVLDRVQREDA 156
GH C V P WLKDG L+ R R E LVLD V EDA
Sbjct: 2901 GHSAVFEC-VVPDTKGVCCKWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDA 2959
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
G Y C +E+ K T + L+V + E
Sbjct: 2960 GKYTCIVENT----------------------------AGKDTCEATLTV----IESLEK 2987
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV-EESDRIQRIG-- 273
K A + + K E V+L C G P P + W + + +ES ++ +
Sbjct: 2988 KSEKKAPEFIVALQDKTTKTSEKVVLECKVIGEPKPKVSWLHDNKTITQESITVESVEGV 3047
Query: 274 SSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRL 333
++I+ E S G + C+A N+EG K + F+ GE + + +NK L
Sbjct: 3048 ERVTITSSELSHQGKYTCIAENTEGTSKTEAFLTV---------QGEAPVFTKELQNKEL 3098
Query: 334 LSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
E ++L CS +G+P P + +
Sbjct: 3099 ---------------SIGEKLVLSCSVKGSPQPHVDF 3120
Score = 56.2 bits (134), Expect = 4e-07, Method: Composition-based stats.
Identities = 93/375 (24%), Positives = 144/375 (38%), Gaps = 75/375 (20%)
Query: 29 IELHCRVSPKRLSSAKAWLKDGLVLR-------RNSDEVLVLDRV---QREDAGMYQCHV 78
IE H +P ++ W KDG + RN+ + ++ + D G+Y C
Sbjct: 5296 IECHVDANP---TAEVEWFKDGKKIEHTAHTEIRNTVDGACRIKIIPFEESDIGVYMC-- 5350
Query: 79 SADDDSAQMSAQVILGGELVEIASSNQ--------------VVVDVGHRIELHCRVSPKR 124
A ++ Q Q E++E + V+ G I L C+V
Sbjct: 5351 VAVNELGQAETQATYQVEILEHVEEEKRREYAPKINPPLEDKTVNGGQPIRLSCKVDAIP 5410
Query: 125 LSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDES 184
+S W KDGL LR +S +Q E EDG + L I+ E
Sbjct: 5411 RASV-VWYKDGLPLRADSRT-----SIQYE---------EDG------TATLAINDSTEE 5449
Query: 185 DRYRSYQCRGVNKL-TGASLLSVNRGRLSLTENKRLLSAAKMFEKHRI-LNVKKDESVIL 242
D +Y+C N T + SVN ++ E K+ F K + L + +S L
Sbjct: 5450 D-IGAYRCVATNAHGTINTSCSVNV-KVPKQEVKKE-GEEPFFTKGLVDLWADRGDSFTL 5506
Query: 243 PCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-----SLSISHVEESDSGVWNCVANNSE 297
C+ G+P P IKWY+ + R S SL+++ SD G++ C A N+
Sbjct: 5507 KCAVTGDPFPEIKWYRNGQLLRNGPRTVIETSPDGSCSLTVNESTMSDEGIYRCEAENAH 5566
Query: 298 GQDKMQ--LFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVI 355
G+ K Q +Q A GK E + K +L + M +V +
Sbjct: 5567 GKAKTQATAHVQMALGKTEKPKMDE------GKPPKFILELSDM-------SVSLGNVID 5613
Query: 356 LPCSAQGNPLPTIKY 370
L C G P P++K+
Sbjct: 5614 LECKVTGLPNPSVKW 5628
Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats.
Identities = 70/315 (22%), Positives = 118/315 (37%), Gaps = 47/315 (14%)
Query: 23 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLR-----------RNSDEVLVLDRVQREDA 71
V+ G EL RV K K W KDG+ + N LV+ D
Sbjct: 3591 VEQGKPAELVVRVEGKPEPEVK-WFKDGVPIAIDNQHVIEKKGENGSHTLVIKDTNNADF 3649
Query: 72 GMYQCHVSADDDSAQMSAQVILGGELVEIASSNQV-----------VVDVGHRIELHCRV 120
G Y C + + ++ + E ++ +V G + L C+V
Sbjct: 3650 GKYTCQATNKAGKDETVGELKIPKYSFEKQTAEEVKPLFIEPLKETFAVEGDTVVLECKV 3709
Query: 121 SPKRLSSAKAWLKDG---------LVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHML 171
+ + K + D L + + + L + ++ED G Y+C +
Sbjct: 3710 NKESHPQIKFFKNDQPVEIGQHMQLEVLEDGNIKLTIQNAKKEDVGAYRCEAVNVAGKAN 3769
Query: 172 SSGELIIH---QVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEK 228
++ +L I +V+E S Q + + +V S T+ R A + E
Sbjct: 3770 TNADLKIQFAAKVEEHVTDESGQLEEIGQFE-----TVGDTASSKTDTGR--GAPEFVEL 3822
Query: 229 HRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-----SLSISHVEE 283
R V + + IL C +G P P IKW K+ VE S R++ +L+ +V +
Sbjct: 3823 LRSCTVTEKQQAILKCKVKGEPRPKIKWTKEGKEVEMSARVRAEHKDDGTLTLTFDNVTQ 3882
Query: 284 SDSGVWNCVANNSEG 298
+D+G + C A N G
Sbjct: 3883 ADAGEYRCEAENEYG 3897
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 81/390 (20%), Positives = 131/390 (33%), Gaps = 83/390 (21%)
Query: 17 PSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNS----------DEVLVLDRV 66
P V+ G I L C+V +S W KDGL LR +S L ++
Sbjct: 5388 PLEDKTVNGGQPIRLSCKVDAIPRASV-VWYKDGLPLRADSRTSIQYEEDGTATLAINDS 5446
Query: 67 QREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQ----------VVVDVGHRIEL 116
ED G Y+C + + S V + E+ + + D G L
Sbjct: 5447 TEEDIGAYRCVATNAHGTINTSCSVNVKVPKQEVKKEGEEPFFTKGLVDLWADRGDSFTL 5506
Query: 117 HCRVSPKRLSSAKAWLKDGLVLRRNSDEV----------LVLDRVQREDAGMYQCHIEDG 166
C V+ K W ++G +LR V L ++ D G+Y+C E+
Sbjct: 5507 KCAVTGDPFPEIK-WYRNGQLLRNGPRTVIETSPDGSCSLTVNESTMSDEGIYRCEAENA 5565
Query: 167 KYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA--K 224
G K + + + G+ TE ++ K
Sbjct: 5566 --------------------------HGKAKTQATAHVQMALGK---TEKPKMDEGKPPK 5596
Query: 225 MFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS------LSI 278
+ ++V + L C G P P++KW K P+ E R + + L I
Sbjct: 5597 FILELSDMSVSLGNVIDLECKVTGLPNPSVKWSKDGGPLIEDSRFEWSNEASKGVYQLRI 5656
Query: 279 SHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAK 338
+ D G + CVA N G + F++ G L SG + Q +
Sbjct: 5657 KNATVHDEGTYRCVATNENGSATTKSFVRMDDG----LGSGVVTASQ----------PPR 5702
Query: 339 MFEKHRILNVKKDESVILPCSAQGNPLPTI 368
K + + + + L C +PLP +
Sbjct: 5703 FTLKMGDVRTTEGQPLKLECKVDASPLPEM 5732
Score = 55.5 bits (132), Expect = 7e-07, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 54/279 (19%)
Query: 46 WLKDGLVLRRNSDEVL-----------VLDRVQREDAGMYQCHVSADDDSAQMSAQV--- 91
WLKDG ++ +S V+ + + ED+G Y C + A+ A
Sbjct: 3319 WLKDGQPVQTDSSHVIAKVEGSGSYSITIKDARLEDSGKYACRATNPAGEAKTEANFAVV 3378
Query: 92 --ILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLD 149
++ E VE S +V + + +P+ + W KD + ++ V
Sbjct: 3379 KNLVPPEFVEKLSPLEVKEKESTTLSVKVVGTPE---PSVEWFKDDTPISIDNVHV---- 3431
Query: 150 RVQREDA-GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNR 208
+Q++ A G + I D + G++ I Y CR N+ G +L + N
Sbjct: 3432 -IQKQTAVGSFSLTINDAR-----QGDVGI-----------YSCRARNE-AGEALTTANF 3473
Query: 209 GRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDR 268
G + R + +K R L V++ E++ L + G P+P ++W+K D P+ +
Sbjct: 3474 GII------RDSIPPEFTQKLRPLEVREQETLDLKVTVIGTPVPNVEWFKDDKPINIDNS 3527
Query: 269 ---IQRIGS---SLSISHVEESDSGVWNCVANNSEGQDK 301
+ GS +L+I D GV+ C A N G+ K
Sbjct: 3528 HIFAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAK 3566
Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 80/209 (38%), Gaps = 43/209 (20%)
Query: 116 LHCRVSPKRLSSAKAWLKDG--------LVLRRNSDEV--LVLDRVQREDAGMYQCHIED 165
L C+ S + K W KDG L L + D V LV+D R+DAG Y+C E+
Sbjct: 5834 LRCKFSGDPKPTIK-WFKDGERVFPYGRLQLIESPDGVCELVVDSATRQDAGGYRCVAEN 5892
Query: 166 GKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKM 225
+S ++ + + D R R + L++ R
Sbjct: 5893 TYGSARTSCDVNVIRGDRKPRDIDSSIREGKAPGFTTPLTIRRA---------------- 5936
Query: 226 FEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS-----LSISH 280
K +SV C GNP P+IKW K + ++I+ ++ L +S
Sbjct: 5937 ---------KPGDSVTFECLPFGNPFPSIKWLKDGLELFSDEKIKMEAAADGTQRLILSD 5987
Query: 281 VEESDSGVWNCVANNSEG--QDKMQLFIQ 307
V G + CVA N G K +L I+
Sbjct: 5988 VTFLSEGYFRCVATNEHGTASTKAELVIE 6016
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 248 GNPLPTIKWYKQDSPVEESDRIQRIGS-----SLSISHVEESDSGVWNCVANNSEGQ 299
G P P +KW K+ P+ ES RI+ + SL I+ DSG+++CVA N GQ
Sbjct: 6532 GEPFPELKWMKEWRPIVESSRIKFVQDGPYLCSLIINDPMWRDSGIYSCVAVNDAGQ 6588
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 232 LNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS----SLSISHVEESDSG 287
+ +K+ E+ + G P PT+KW + VEES I I + +L IS+ + +G
Sbjct: 2084 VTIKETETAEFKATISGFPAPTVKWTINEKIVEESRTITTIKTEDVYTLKISNAKIEQTG 2143
Query: 288 VWNCVANNSEGQDKMQ 303
A NS GQD Q
Sbjct: 2144 TVKVTAQNSAGQDSKQ 2159
Score = 41.6 bits (96), Expect = 0.009, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-----SLSISHVEESDSGVWN 290
++ S + G PLP I WYK D + E +R +++I V+ +D+G +
Sbjct: 561 QESSAKMCLKVTGYPLPDITWYKDDVQLHEDERHTFYSDEDGFFAMTIDPVQVTDTGRYT 620
Query: 291 CVANNSEGQDKMQLFIQ 307
C+A N GQ F +
Sbjct: 621 CMATNEYGQASTSAFFR 637
Score = 41.2 bits (95), Expect = 0.014, Method: Composition-based stats.
Identities = 63/317 (19%), Positives = 117/317 (36%), Gaps = 57/317 (17%)
Query: 23 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADD 82
VDV + +V + + W K+G L+ ++D ++ ++G + + +
Sbjct: 4977 VDVEEPQPVELKVKVEGIPKVIKWYKNGQELKPDADG---FKFEEKPESGEFSLTIPSSK 5033
Query: 83 DSAQMSAQVILGGELVEIASSNQV-----------------------VVDVGHRIELHCR 119
S + +V+LG + E+ S + V V+ G + L C
Sbjct: 5034 KSDGGAYRVVLGNDKGEVYSGSVVHVKSAKSSEPTSGANFLSPLKDTEVEEGDMLTLQCT 5093
Query: 120 VSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIH 179
++ + W KDG+VL+++ DR+ A + + L I
Sbjct: 5094 IAGEPFPEV-IWEKDGVVLQKD-------DRITMRVA-------------LDGTATLRIR 5132
Query: 180 QVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDES 239
+SD Y+ N+ A+ + ++++TE S K + +
Sbjct: 5133 SAKKSD-IGQYRVTAKNEAGSAT----SDCKVTVTEQGEQPSKPKFVIPLKTGAALPGDK 5187
Query: 240 VILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS-----LSISHVEESDSGVWNCVAN 294
+G P PT++W+ P++ DRI + L+I V E D G C+A
Sbjct: 5188 KEFNVKVRGLPKPTLQWFLNGIPIKFDDRITLDDMADGNYCLTIRDVREEDFGTLKCIAK 5247
Query: 295 NSEGQDKMQLFIQYAHG 311
N G D+ Q G
Sbjct: 5248 NENGTDETVCEFQQGAG 5264
Score = 40.4 bits (93), Expect = 0.022, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 17/170 (10%)
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
EDG + M I V +D R Y C N+ AS + R + + ++ +
Sbjct: 600 EDGFFAM------TIDPVQVTDTGR-YTCMATNEYGQASTSAFFR----VLKVEKEAAPP 648
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESD--RIQRIGSS--LSIS 279
K R K+ + + C +G P P + W D P+ S R+Q G + L I
Sbjct: 649 AFVTKLRDKECKEGDVIDFECEVEGWPEPELVWLVDDQPLRPSHDFRLQYDGQTAKLEIR 708
Query: 280 HVEESDSGVWNCVANNSEG--QDKMQLFIQYAHGKYHMLSSGELIIHQVD 327
+ D+GV+ N G + K +LF+Q K H+ + I V+
Sbjct: 709 DAQPDDTGVYTVKIQNEFGSIESKAELFVQADPDKNHVAPEFQATIEYVE 758
Score = 40.0 bits (92), Expect = 0.028, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 237 DESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ----RIGSSLSISHVEESDSGVWNCV 292
D +V+ +G P PT+ WY + +++SDR++ +SI +++ D+G V
Sbjct: 1058 DNTVVFEVRVEGEPKPTVTWYLKGEELKQSDRVEIREFDGSIKISIKNIKIEDAGEIRAV 1117
Query: 293 ANNSEGQD--KMQLFIQ 307
A NSEG D K +L +Q
Sbjct: 1118 ATNSEGSDETKAKLTVQ 1134
Score = 38.9 bits (89), Expect = 0.066, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 230 RILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRI----QRIGSSLSISHVEESD 285
R + ++K++ I C+ +P P + W Q +E +DR+ + L ++H D
Sbjct: 7535 RDVYLRKNQPAIFECAVSASPAPKVTWDFQGKILESNDRVTIEQDNNVARLILNHAAPYD 7594
Query: 286 SGVWNCVANNSEGQDK 301
G + C A N G DK
Sbjct: 7595 LGEYVCTAINEYGTDK 7610
Score = 38.1 bits (87), Expect = 0.100, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 40/250 (16%)
Query: 61 LVLDRVQREDAGMYQCHVS-ADDDSAQMSAQVILGGELVEIASS-NQVVVDVGHRIELHC 118
L ++R Q +D Y+ +S A D +A ++ +++I V V+ +EL
Sbjct: 4930 LAINRAQLDDGADYKVVLSNAAGDCDSSAALTVVKPNVLKIVDGLKDVDVEEPQPVELKV 4989
Query: 119 RVS--PKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGEL 176
+V PK + W K+G L+ ++D ++ E G++ L
Sbjct: 4990 KVEGIPKVIK----WYKNGQELKPDAD------------GFKFEEKPESGEF------SL 5027
Query: 177 IIHQVDESD--RYRSYQCRGVNKLTGASLLSVNRGRLSL-TENKRLLSAAKMFEKHRILN 233
I +SD YR ++ S++ V + S T LS K E
Sbjct: 5028 TIPSSKKSDGGAYRVVLGNDKGEVYSGSVVHVKSAKSSEPTSGANFLSPLKDTE------ 5081
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRI-QRIG----SSLSISHVEESDSGV 288
V++ + + L C+ G P P + W K +++ DRI R+ ++L I ++SD G
Sbjct: 5082 VEEGDMLTLQCTIAGEPFPEVIWEKDGVVLQKDDRITMRVALDGTATLRIRSAKKSDIGQ 5141
Query: 289 WNCVANNSEG 298
+ A N G
Sbjct: 5142 YRVTAKNEAG 5151
Score = 37.4 bits (85), Expect = 0.16, Method: Composition-based stats.
Identities = 78/312 (25%), Positives = 116/312 (37%), Gaps = 77/312 (24%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDG----LVLR-----RNSDE-----VLVLDRVQREDA 71
GH C V P WLKDG L+ R R E LVLD V EDA
Sbjct: 2901 GHSAVFEC-VVPDTKGVCCKWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDA 2959
Query: 72 GMYQCHV--SADDDSAQMSAQVILGGELVEIASSNQVVV-------DVGHRIELHCRV-- 120
G Y C V +A D+ + + VI E + + +V ++ L C+V
Sbjct: 2960 GKYTCIVENTAGKDTCEATLTVIESLEKKSEKKAPEFIVALQDKTTKTSEKVVLECKVIG 3019
Query: 121 SPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQ 180
PK S WL D + + S V ++ V+R ++S EL HQ
Sbjct: 3020 EPKPKVS---WLHDNKTITQESITVESVEGVERV---------------TITSSEL-SHQ 3060
Query: 181 VDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA-AKMFEKH-RILNVKKDE 238
Y C ++ N S TE + A +F K + + E
Sbjct: 3061 -------GKYTC-----------IAENTEGTSKTEAFLTVQGEAPVFTKELQNKELSIGE 3102
Query: 239 SVILPCSAQGNPLPTIKWY------KQDSPVEESDRI------QRIGSSLSISHVEESDS 286
++L CS +G+P P + +Y K ++ + S RI + IS + + D
Sbjct: 3103 KLVLSCSVKGSPQPHVDFYSFSETTKVETKITSSSRIAIEHDQTNTHWRMVISQITKEDI 3162
Query: 287 GVWNCVANNSEG 298
+ +A NS G
Sbjct: 3163 VSYKAIATNSIG 3174
Score = 35.0 bits (79), Expect = 0.96, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 25/152 (16%)
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEE-------SDRIQRIGSSL 276
K+ + + ++V++ + V L +G P IKWYK ++ ++ + SL
Sbjct: 4969 KIVDGLKDVDVEEPQPVELKVKVEGIP-KVIKWYKNGQELKPDADGFKFEEKPESGEFSL 5027
Query: 277 SISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSA 336
+I ++SD G + V N +G+ + SG ++H K+ S
Sbjct: 5028 TIPSSKKSDGGAYRVVLGNDKGE----------------VYSGS-VVHVKSAKSSEPTSG 5070
Query: 337 AKMFEKHRILNVKKDESVILPCSAQGNPLPTI 368
A + V++ + + L C+ G P P +
Sbjct: 5071 ANFLSPLKDTEVEEGDMLTLQCTIAGEPFPEV 5102
Score = 32.0 bits (71), Expect = 8.0, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS----SLSISHVEESDSGVW 289
VK+ E V + +G P P++ W PV + I ++ IS V +G
Sbjct: 2378 VKEGEDVKFTANVEGYPEPSVAWTLNGEPVSKHPNITVTDKDGEHTIEISAVTPEQAGEL 2437
Query: 290 NCVANNSEGQDK 301
+C A N G K
Sbjct: 2438 SCEATNPVGSKK 2449
>sp|P14781|CNTN1_CHICK Contactin-1 OS=Gallus gallus GN=CNTN1 PE=1 SV=1
Length = 1010
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 172 SSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA---AKMFEK 228
++G L I V+ SD+ +Y C + S+ S + + ++ A K +
Sbjct: 184 TNGNLYIANVEASDK-GNYSCFVSSPSITKSVFSKFIPLIPQADRAKVYPADIKVKFKDT 242
Query: 229 HRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGV 288
+ +L ++V L C A GNP+P ++W K P+ + I G+ L I +++ D G+
Sbjct: 243 YALLG----QNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLKIFNIQYEDEGL 298
Query: 289 WNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNV 348
+ C A N +G+DK Q + ++ +S E + H +++ K + S
Sbjct: 299 YECEAENYKGKDKHQ-------ARVYVQASPEWVEH-INDTEKDIGS------------- 337
Query: 349 KKDESVILPCSAQGNPLPTIKY 370
+ PC A G P+PTI++
Sbjct: 338 ----DLYWPCVATGKPIPTIRW 355
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 51/248 (20%)
Query: 57 SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIEL 116
S VL + +Q ED G+Y+C + A+V + + N D+G +
Sbjct: 282 SGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYW 341
Query: 117 HCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGEL 176
C + K + + + WLK+G+ R+ L + + EDAGMYQC E+ + ++ EL
Sbjct: 342 PCVATGKPIPTIR-WLKNGVSFRKGE---LRIQGLTFEDAGMYQCIAENAHGIIYANAEL 397
Query: 177 IIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFE----KHRIL 232
+++++ FE K +IL
Sbjct: 398 -----------------------------------------KIVASPPTFELNPMKKKIL 416
Query: 233 NVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNC 291
K VI+ C + P P W K + RI SL I +V + D G + C
Sbjct: 417 AAKGGR-VIIECKPKAAPKPKFSWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTC 475
Query: 292 VANNSEGQ 299
A N+ G+
Sbjct: 476 FAENNRGK 483
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 30/170 (17%)
Query: 24 DVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADDD 83
D+G + C + K + + + WLK+G+ R+ L + + EDAGMYQC
Sbjct: 334 DIGSDLYWPCVATGKPIPTIR-WLKNGVSFRKGE---LRIQGLTFEDAGMYQC------- 382
Query: 84 SAQMSAQVILGGELVEIASS----------NQVVVDVGHRIELHCRVSPKRLSSAKAWLK 133
A+ + +I ++I +S +++ G R+ + C+ PK K
Sbjct: 383 IAENAHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECK--PKAAPKPKFSWS 440
Query: 134 DGLVLRRNSDEVLVLD-------RVQREDAGMYQCHIEDGKYHMLSSGEL 176
G L N + + D V + D G Y C E+ + S+G L
Sbjct: 441 KGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVL 490
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 30/128 (23%)
Query: 243 PCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQDKM 302
PC A G P+PTI+W K + + L I + D+G++ C+A N+ G
Sbjct: 342 PCVATGKPIPTIRWLKNGVSFRKGE--------LRIQGLTFEDAGMYQCIAENAHG---- 389
Query: 303 QLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQG 362
I YA+ + +++S +++ K++L+A K VI+ C +
Sbjct: 390 ---IIYANAELKIVASPPTF--ELNPMKKKILAA-------------KGGRVIIECKPKA 431
Query: 363 NPLPTIKY 370
P P +
Sbjct: 432 APKPKFSW 439
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 223 AKMFEKHRILNVKKDES----VILPCSAQGNPLPTIKWYKQDSPVE-ESDRIQRIGSSLS 277
+FE+ I + +ES V + C A+ P PT KW + ++ DR +G L
Sbjct: 32 GPVFEEQPIDTIYPEESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLV 91
Query: 278 ISHVEES-DSGVWNCVANNSEG 298
IS+ E+S D+G + CV +N G
Sbjct: 92 ISNPEKSRDAGKYVCVVSNIFG 113
>sp|Q6DJ83|CADM2_XENTR Cell adhesion molecule 2 OS=Xenopus tropicalis GN=cadm2 PE=2 SV=1
Length = 433
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 21 VVVDVGHRIELHCRVSPKRLSSAK--------AWLKDGLVLRRNSDEV---------LVL 63
V V G I L CRV +S + + D LR N E+ + +
Sbjct: 32 VTVVEGGTINLTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISI 91
Query: 64 DRVQREDAGMYQCHVSADDDSAQMSAQVILG-GELVEIASSNQVVVDVGHRIELHCRVSP 122
V D G Y C + + ++LG E I+ V++ G I+L C+ S
Sbjct: 92 SDVSLSDEGQYTCSLFTMPVKTSKAYLMVLGVPENPHISGFTSPVME-GDTIQLTCKSSG 150
Query: 123 KRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVD 182
+ ++ W K N E+ + ++Q++D+ +GK ++S ++ Q D
Sbjct: 151 SKPAADIRWFK-------NDQEITDVQKIQQQDS--------NGKTFTVTSS--LVFQGD 193
Query: 183 ESDRYRSYQCRGVNK-LTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVI 241
D +CR ++ LT ++ + T R+L + + ++ + L I
Sbjct: 194 RKDDGAVIRCRVDHESLTSTPQIAKQVLEIHYTPTVRILPSTPLPQEGQPL--------I 245
Query: 242 LPCSAQGNPLP-TIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVANNSEGQ 299
L C ++G PLP + W K + + +R+ G L+IS + ++D+G + C A NS GQ
Sbjct: 246 LICESKGKPLPEPVLWTKDGGELPDPERMTVNGRELTISFLNKTDNGTYRCEATNSIGQ 304
>sp|Q9BWV1|BOC_HUMAN Brother of CDO OS=Homo sapiens GN=BOC PE=1 SV=1
Length = 1114
Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats.
Identities = 96/392 (24%), Positives = 154/392 (39%), Gaps = 99/392 (25%)
Query: 2 QLFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV- 60
Q+ +Q S++ P G V+ L C V P R++ W +G L + D +
Sbjct: 37 QVTVQPASTVQ---KPGGTVI--------LGCVVEPPRMNVT--WRLNGKELNGSDDALG 83
Query: 61 -------LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILG-GELVEIASSNQVVVDVGH 112
LV+ + G YQC A+M A + V +A+ +DV H
Sbjct: 84 VLITHGTLVITALNNHTVGRYQC-------VARMPAGAVASVPATVTLANLQDFKLDVQH 136
Query: 113 RIE--------LHCRVS---PK---RLSSAKAWLK--DGLVLRRNSDEVLVLDRVQREDA 156
IE + C + PK R S + WL+ G L S + +++ Q ED
Sbjct: 137 VIEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLEASRGNYLIMPSGNLQIVNASQ-EDE 195
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
GMY+C Y+ ++ + SDR R R S E
Sbjct: 196 GMYKC----AAYNPVTQE---VKTSGSSDRLRV--------------------RRSTAEA 228
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSL 276
R++ E I+ V K +S+IL C A G P P + W K S V ++ + + S+L
Sbjct: 229 ARIIYPP---EAQTII-VTKGQSLILECVASGIPPPRVTWAKDGSSVTGYNKTRFLLSNL 284
Query: 277 SISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSA 336
I E DSG + C+A+N GQ + + Y++ QV E + +
Sbjct: 285 LIDTTSEEDSGTYRCMADNGVGQPGAAVIL------YNV---------QVFEPPEVTMEL 329
Query: 337 AKMFEKHRILNVKKDESVILPCSAQGNPLPTI 368
+++ + +S L C +GNP P++
Sbjct: 330 SQLV-------IPWGQSAKLTCEVRGNPPPSV 354
Score = 49.7 bits (117), Expect = 4e-05, Method: Composition-based stats.
Identities = 70/304 (23%), Positives = 115/304 (37%), Gaps = 69/304 (22%)
Query: 21 VVVDVGHRIELHCRVS---PK---RLSSAKAWLK--DGLVLRRNSDEVLVLDRVQREDAG 72
+ VD G+ + C + PK R S + WL+ G L S + +++ Q ED G
Sbjct: 138 IEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLEASRGNYLIMPSGNLQIVNASQ-EDEG 196
Query: 73 MYQC----------HVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVS- 121
MY+C S D ++ ++ + ++V G + L C S
Sbjct: 197 MYKCAAYNPVTQEVKTSGSSDRLRVRRSTAEAARIIYPPEAQTIIVTKGQSLILECVASG 256
Query: 122 --PKRLSSAKAWLKDGL-VLRRNSDEVLV----LDRVQREDAGMYQCHIEDGKYHMLSSG 174
P R++ W KDG V N L+ +D ED+G Y+C ++G
Sbjct: 257 IPPPRVT----WAKDGSSVTGYNKTRFLLSNLLIDTTSEEDSGTYRCMADNG-------- 304
Query: 175 ELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNV 234
+ Q GA+++ N E LS L +
Sbjct: 305 ---VGQ------------------PGAAVILYNVQVFEPPEVTMELSQ---------LVI 334
Query: 235 KKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVWNCVAN 294
+S L C +GNP P++ W + P+ S R++ +L + + D GV+ C+A
Sbjct: 335 PWGQSAKLTCEVRGNPPPSVLWLRNAVPLISSQRLRLSRRALRVLSMGPEDEGVYQCMAE 394
Query: 295 NSEG 298
N G
Sbjct: 395 NEVG 398
>sp|Q92859|NEO1_HUMAN Neogenin OS=Homo sapiens GN=NEO1 PE=1 SV=2
Length = 1461
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 83/343 (24%), Positives = 133/343 (38%), Gaps = 72/343 (20%)
Query: 46 WLKDGLVLRRNSDEV-------------LVLDRVQREDAGMYQCHVSADDDSAQMS--AQ 90
W KDG L SD+ +V + + D G YQC + + +S A+
Sbjct: 86 WKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHNKPDEGYYQCVATVESLGTIISRTAK 145
Query: 91 VILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDR 150
+I+ G + V G+ L+C V+ + + W +N +L+ DR
Sbjct: 146 LIVAGLPRFTSQPEPSSVYAGNNAILNCEVNADLVPFVR-W-------EQNRQPLLLDDR 197
Query: 151 VQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGR 210
V + L SG L+I E D Y+C V + G S +
Sbjct: 198 VIK-----------------LPSGMLVISNATEGDG-GLYRC--VVESGGPPKYS-DEVE 236
Query: 211 LSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPV--EESDR 268
L + + ++S ++ L + V+LPC A G P PTIKW K + + E S+R
Sbjct: 237 LKVLPDPEVISDLVFLKQPSPLVRVIGQDVVLPCVASGLPTPTIKWMKNEEALDTESSER 296
Query: 269 IQRI-GSSLSISHVEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVD 327
+ + G SL IS V E D+G + C+A+N G + + EL +
Sbjct: 297 LVLLAGGSLEISDVTEDDAGTYFCIADN---------------GNETIEAQAELTVQAQP 341
Query: 328 EKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKY 370
E L H ++ ++ C G P PT+K+
Sbjct: 342 E----FLKQPTNIYAHESMD------IVFECEVTGKPTPTVKW 374
Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 98/259 (37%), Gaps = 48/259 (18%)
Query: 60 VLVLDRVQREDAGMYQCHVSADDD---SAQMSAQVILGGE----LVEIASSNQVVVDVGH 112
+LV+ D G+Y+C V + S ++ +V+ E LV + + +V +G
Sbjct: 205 MLVISNATEGDGGLYRCVVESGGPPKYSDEVELKVLPDPEVISDLVFLKQPSPLVRVIGQ 264
Query: 113 RIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLS 172
+ L C S + K W+K+ L S E LVL L+
Sbjct: 265 DVVLPCVASGLPTPTIK-WMKNEEALDTESSERLVL----------------------LA 301
Query: 173 SGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRIL 232
G L I V E D G + G ++ L A+ +
Sbjct: 302 GGSLEISDVTEDD-------------AGTYFCIADNGNETIEAQAELTVQAQPEFLKQPT 348
Query: 233 NVKKDES--VILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGS-SLSISHVEESDSGVW 289
N+ ES ++ C G P PT+KW K V SD + + +L + + +SD G +
Sbjct: 349 NIYAHESMDIVFECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFY 408
Query: 290 NCVANNSEG--QDKMQLFI 306
C+A N G Q QL I
Sbjct: 409 QCIAENDVGNAQAGAQLII 427
Score = 41.6 bits (96), Expect = 0.010, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 17/187 (9%)
Query: 6 QVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVL-- 63
+V S L PS V V +G + L C S + K W+K+ L S E LVL
Sbjct: 244 EVISDLVFLKQPSPLVRV-IGQDVVLPCVASGLPTPTIK-WMKNEEALDTESSERLVLLA 301
Query: 64 ------DRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELH 117
V +DAG Y C +++ + A++ + + + + I
Sbjct: 302 GGSLEISDVTEDDAGTYFCIADNGNETIEAQAELTVQAQPEFLKQPTNIYAHESMDIVFE 361
Query: 118 CRVSPKRLSSAKAWLKDG-LVLRRNSDEVLVLDRVQ-----REDAGMYQCHIEDGKYHML 171
C V+ K + K W+K+G +V+ + +++ +Q + D G YQC E+ +
Sbjct: 362 CEVTGKPTPTVK-WVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQ 420
Query: 172 SSGELII 178
+ +LII
Sbjct: 421 AGAQLII 427
Score = 35.4 bits (80), Expect = 0.66, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVE--ESDRIQRI-GSSLSISHVEES-----DSG 287
+ SVIL CSA P P I+W K + + DR Q + SL IS+V S D G
Sbjct: 66 RGSSVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHNKPDEG 125
Query: 288 VWNCVA 293
+ CVA
Sbjct: 126 YYQCVA 131
>sp|Q8TD84|DSCL1_HUMAN Down syndrome cell adhesion molecule-like protein 1 OS=Homo sapiens
GN=DSCAML1 PE=1 SV=2
Length = 2053
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 163 IEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSA 222
I + ++ + G L I V + D +Y+C +K +G + S N RLS+T+ S
Sbjct: 169 IPEHRFFITYHGGLYISDVQKEDALSTYRCITKHKYSGETRQS-NGARLSVTDPAE--SI 225
Query: 223 AKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSSLSISHVE 282
+ + V +V LPC+A G P+P I+W K P+ R + + L+IS +
Sbjct: 226 PTILDGFHSQEVWAGHTVELPCTASGYPIPAIRWLKDGRPLPADSRWTKRITGLTISDLR 285
Query: 283 ESDSGVWNCVANNSEG 298
DSG + C N+ G
Sbjct: 286 TEDSGTYICEVTNTFG 301
Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats.
Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 62/299 (20%)
Query: 26 GHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV-----LVLDRVQREDAGMYQCHVSA 80
GH +EL C S + + + WLKDG L +S L + ++ ED+G Y C V+
Sbjct: 240 GHTVELPCTASGYPIPAIR-WLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEVTN 298
Query: 81 DDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVL-- 138
SA+ + +++ L + ++ +G + L C ++ + + + LVL
Sbjct: 299 TFGSAEATGILMVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPD 358
Query: 139 -----RRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCR 193
R S+E L++ Q+ +G YQC + R
Sbjct: 359 EAISIRGLSNETLLITSAQKSHSGAYQC----------------------------FATR 390
Query: 194 GVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPT 253
+++++ G R++S+ +++N E L C+A+G P PT
Sbjct: 391 KAQTAQDFAIIALEDG------TPRIVSSF----SEKVVN--PGEQFSLMCAAKGAPPPT 438
Query: 254 IKWYKQDSPV--EESDRIQR--IGSSLSISHVEES-----DSGVWNCVANNSEGQDKMQ 303
+ W D P+ + S R + + +ISH+ + D GV+ C A N G + Q
Sbjct: 439 VTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGVYRCTARNLVGSAEYQ 497
Score = 52.4 bits (124), Expect = 5e-06, Method: Composition-based stats.
Identities = 74/330 (22%), Positives = 131/330 (39%), Gaps = 90/330 (27%)
Query: 61 LVLDRVQREDA-GMYQC---HVSADDDSAQMSAQVILGGELVEIASSNQVVVD------- 109
L + VQ+EDA Y+C H + + A++ + + A S ++D
Sbjct: 182 LYISDVQKEDALSTYRCITKHKYSGETRQSNGARL----SVTDPAESIPTILDGFHSQEV 237
Query: 110 -VGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV-----LVLDRVQREDAGMYQCHI 163
GH +EL C S + + + WLKDG L +S L + ++ ED+G Y C +
Sbjct: 238 WAGHTVELPCTASGYPIPAIR-WLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEV 296
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
++ + S + G+ L+ ++ ++LT K
Sbjct: 297 --------------------TNTFGSAEATGI-------LMVIDPLHVTLTPKK------ 323
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRIGSS---LSISH 280
L +VIL C+ G+P TI+WY+ V + I G S L I+
Sbjct: 324 --------LKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPDEAISIRGLSNETLLITS 375
Query: 281 VEESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMF 340
++S SG + C A K Q ++ + I +++ R++S+
Sbjct: 376 AQKSHSGAYQCFATR-----KAQ-------------TAQDFAIIALEDGTPRIVSSFS-- 415
Query: 341 EKHRILNVKKDESVILPCSAQGNPLPTIKY 370
+++N E L C+A+G P PT+ +
Sbjct: 416 --EKVVN--PGEQFSLMCAAKGAPPPTVTW 441
Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 238 ESVILPCSAQGNPLPTIKWYK--QDSPVEES---DRIQRIGSSLSISHVEESDSGVWNCV 292
+ V LPC++ G+P P +KW K +DS + S R+ +L + V+ DSG + C
Sbjct: 1305 KDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSMDGHRLIHTNGTLLLRAVKAEDSGYYTCT 1364
Query: 293 ANNSEGQDKM--QLFIQ 307
A N+ G D + L +Q
Sbjct: 1365 ATNTGGFDTIIVNLLVQ 1381
Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 241 ILPCSAQGNPLPTIKWY--------KQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNC 291
+L CS G P P + W +Q PV + RIQ + SSL I HV E D G + C
Sbjct: 708 VLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLC 767
Query: 292 VANNSEGQD 300
A+N G D
Sbjct: 768 QASNGVGTD 776
Score = 38.9 bits (89), Expect = 0.060, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 38/215 (17%)
Query: 49 DGLVLRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASS-NQVV 107
+ + +R S+E L++ Q+ +G YQC + +AQ A + L I SS ++ V
Sbjct: 359 EAISIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIALEDGTPRIVSSFSEKV 418
Query: 108 VDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGK 167
V+ G + L C + W D DE +V D R + Q + DG
Sbjct: 419 VNPGEQFSLMCAAKGAPPPTV-TWALD--------DEPIVRDGSHRTN----QYTMSDGT 465
Query: 168 Y--HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLS-VN-RGRLSLTENKRLLSAA 223
HM +G Q+ + YR C N + A + +N RG S+ + + + A
Sbjct: 466 TISHMNVTGP----QIRDGGVYR---CTARNLVGSAEYQARINVRGPPSIRAMRNITAVA 518
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYK 258
++ C G P +IKWYK
Sbjct: 519 -------------GRDTLINCRVIGYPYYSIKWYK 540
Score = 36.2 bits (82), Expect = 0.44, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 28/157 (17%)
Query: 166 GKYHMLSSGELIIHQVDESD--RYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
G+ +L + L+I V E D Y GV S+ + +T + A
Sbjct: 742 GRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAI 801
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQR-----------I 272
K K L C+A+G I+W K D+ V + DR+ R +
Sbjct: 802 KGHAKE------------LNCTARGERPIIIRWEKGDT-VIDPDRVMRYAIATKDNGDEV 848
Query: 273 GSSLSISHVEESDSGVWNCVANNSEGQDK--MQLFIQ 307
S+L + + DS ++C A NS G+D+ +QL +Q
Sbjct: 849 VSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQ 885
>sp|P70211|DCC_MOUSE Netrin receptor DCC OS=Mus musculus GN=Dcc PE=1 SV=2
Length = 1447
Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 46/306 (15%)
Query: 6 QVK--SSLSIEMSPSGQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEV--- 60
Q+K +SL PS V + G + L+C R W KDGL+L D+
Sbjct: 33 QIKPFTSLHFVSEPSDAVTMR-GGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQ 91
Query: 61 ----------LVLDRVQREDAGMYQCHVSADDDSAQMS--AQVILGGELVEIASSNQVVV 108
++ R + D G+YQC S D + +S A+V + G L ++ + +
Sbjct: 92 LPNGSLLIQNILHSRHHKPDEGLYQCEASLADSGSIISRTAKVTVAGPLRFLSQTESITA 151
Query: 109 DVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKY 168
+G + L C V + + + W ++N ++ L D +
Sbjct: 152 FMGDTVLLKCEVIGEPMPTIH-W-------QKNQQDLNPLP--------------GDSRV 189
Query: 169 HMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEK 228
+L SG L I ++ D Y+C N AS+ + N + + + L ++
Sbjct: 190 VVLPSGALQISRLQPGDS-GVYRCSARNP---ASIRTGNEAEVRILSDPGLHRQLYFLQR 245
Query: 229 HRILNVKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI--GSSLSISHVEESDS 286
+ + + +L C G P P+ W + + ++ + + GS+L IS+V + DS
Sbjct: 246 PSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDS 305
Query: 287 GVWNCV 292
G + CV
Sbjct: 306 GTYTCV 311
Score = 55.5 bits (132), Expect = 7e-07, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 38/204 (18%)
Query: 100 IASSNQVVVDVGHRIELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMY 159
++ + V G + L+C R W KDGL+L D DR Q+
Sbjct: 43 VSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMD-----DRKQQ------ 91
Query: 160 QCHIEDGKYHMLSSGELIIHQVDESDRYRS----YQCRGVNKLTGASLLSVNRGRLSLTE 215
L +G L+I + S ++ YQC L + + ++++
Sbjct: 92 -----------LPNGSLLIQNILHSRHHKPDEGLYQCEA--SLADSGSIISRTAKVTVAG 138
Query: 216 NKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYK--QD-SPVEESDRIQRI 272
R LS + + ++V+L C G P+PTI W K QD +P+ R+ +
Sbjct: 139 PLRFLSQTES------ITAFMGDTVLLKCEVIGEPMPTIHWQKNQQDLNPLPGDSRVVVL 192
Query: 273 GS-SLSISHVEESDSGVWNCVANN 295
S +L IS ++ DSGV+ C A N
Sbjct: 193 PSGALQISRLQPGDSGVYRCSARN 216
Score = 52.4 bits (124), Expect = 6e-06, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 45/256 (17%)
Query: 61 LVLDRVQREDAGMYQCHV-------SADDDSAQMSAQVILGGELVEIASSNQVVVDVGHR 113
L + R+Q D+G+Y+C + ++ ++ + L +L + + V+ G
Sbjct: 197 LQISRLQPGDSGVYRCSARNPASIRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKD 256
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSS 173
L C VS S WL+ +EV+ + KY +L
Sbjct: 257 AVLECCVSGYPPPSF-TWLR--------GEEVI---------------QLRSKKYSLLGG 292
Query: 174 GELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILN 233
L+I V + D +Y C +++ +S + +L L
Sbjct: 293 SNLLISNVTDDDS-GTYTC----------VVTYKNENISASAELTVLVPPWFLNHPSNLY 341
Query: 234 VKKDESVILPCSAQGNPLPTIKWYKQDSPVEESDRIQRI-GSSLSISHVEESDSGVWNCV 292
+ + C+ G P+PT+ W K V SD Q + GS+L I V +SD G + CV
Sbjct: 342 AYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCV 401
Query: 293 ANNSEG--QDKMQLFI 306
A N G Q QL +
Sbjct: 402 AENEAGNAQSSAQLIV 417
>sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn PE=2 SV=1
Length = 1457
Score = 63.2 bits (152), Expect = 3e-09, Method: Composition-based stats.
Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 39/249 (15%)
Query: 61 LVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASSNQVVVDVGHRIELHCRV 120
L + V ++DAG Y C + ++ +A +I+ V GH ++ HC
Sbjct: 387 LYIQNVNQDDAGEYTCFATNSVETIHSTAYIIVQAVPQFTVVPQDRNVFEGHTVDFHCEA 446
Query: 121 --SPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSSGELII 178
+PK + AW K G L +DR ++ +LSSG L I
Sbjct: 447 QGNPKPVI---AWTKGG--------NQLSVDR----------------RHQVLSSGTLRI 479
Query: 179 HQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDE 238
+V D+ + Y+C+ VN + S + L R+ + V D
Sbjct: 480 LRVALHDQGQ-YECQAVNIVGSKSTAA------QLIVQTRVTPVFATVPNDMTVEVGTD- 531
Query: 239 SVILPCSAQGNPLPTIKWYKQDSPVEESDRIQ-RIGSSLSISHVEESDSGVWNCVANNSE 297
V +PCS+QG+PLP I W K V ES + L+I +D G + CVA N
Sbjct: 532 -VQIPCSSQGDPLPIITWNKDGIQVTESGKFHISPHGYLAIRDAGLADQGRYECVARNPI 590
Query: 298 GQDKMQLFI 306
G + + +
Sbjct: 591 GYSSVSMVL 599
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 81/209 (38%), Gaps = 34/209 (16%)
Query: 164 EDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAA 223
+D + ++L+ G L+I E+D+ YQC N V +
Sbjct: 280 DDSRLNLLNDGTLMIQNTKETDQ-GIYQCMAKNVAGEVKTHEVTLRYYGTPATPTFVIQP 338
Query: 224 KMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYKQD-SPVEESDRIQRIGS-SLSISHV 281
+ E V ESV L CSA G P P + W + D +P+ RI S L I +V
Sbjct: 339 QNTE------VLVGESVTLECSATGQPHPRVTWTRGDRTPLPSDPRINITPSGGLYIQNV 392
Query: 282 EESDSGVWNCVANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFE 341
+ D+G + C A NS ++ H S II Q + + +FE
Sbjct: 393 NQDDAGEYTCFATNS---------VETIH-------STAYIIVQAVPQFTVVPQDRNVFE 436
Query: 342 KHRILNVKKDESVILPCSAQGNPLPTIKY 370
H +V C AQGNP P I +
Sbjct: 437 GH---------TVDFHCEAQGNPKPVIAW 456
Score = 51.2 bits (121), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 33/183 (18%)
Query: 192 CRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPL 251
C +L G S+ ++ L+ E R+ S + ++V +V C A+GNP
Sbjct: 212 CEYPRRLQGRSVSTITPSELN-CERPRITSEPQD------VDVTFGNTVYFTCRAEGNPK 264
Query: 252 PTIKWYKQDSPVEESD--RIQRIGS-SLSISHVEESDSGVWNCVANNSEGQDKM-QLFIQ 307
P I W + ++ + D R+ + +L I + +E+D G++ C+A N G+ K ++ ++
Sbjct: 265 PEIIWLRNNNELSMKDDSRLNLLNDGTLMIQNTKETDQGIYQCMAKNVAGEVKTHEVTLR 324
Query: 308 YAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPT 367
Y Y ++ +I +N +L ESV L CSA G P P
Sbjct: 325 Y----YGTPATPTFVIQ---PQNTEVLVG---------------ESVTLECSATGQPHPR 362
Query: 368 IKY 370
+ +
Sbjct: 363 VTW 365
Score = 45.4 bits (106), Expect = 7e-04, Method: Composition-based stats.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 40/210 (19%)
Query: 4 FIQVKSSLSIEMSPSGQVVVDVGHRIELHCRV--SPKRLSSAKAWLKDGLVL---RRN-- 56
+I V++ + P + V + GH ++ HC +PK + AW K G L RR+
Sbjct: 416 YIIVQAVPQFTVVPQDRNVFE-GHTVDFHCEAQGNPKPVI---AWTKGGNQLSVDRRHQV 471
Query: 57 -SDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEIASS--NQVVVDVGHR 113
S L + RV D G Y+C S +AQ+I+ + + ++ N + V+VG
Sbjct: 472 LSSGTLRILRVALHDQGQYECQAVNIVGSKSTAAQLIVQTRVTPVFATVPNDMTVEVGTD 531
Query: 114 IELHCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHMLSS 173
+++ C L W KDG+ + E GK+H+
Sbjct: 532 VQIPCSSQGDPLPII-TWNKDGIQV------------------------TESGKFHISPH 566
Query: 174 GELIIHQVDESDRYRSYQCRGVNKLTGASL 203
G L I +D+ R Y+C N + +S+
Sbjct: 567 GYLAIRDAGLADQGR-YECVARNPIGYSSV 595
>sp|Q810U4|NRCAM_MOUSE Neuronal cell adhesion molecule OS=Mus musculus GN=Nrcam PE=1 SV=2
Length = 1256
Score = 63.2 bits (152), Expect = 3e-09, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 46/273 (16%)
Query: 46 WLK-DGLV-----LRRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVE 99
W+K DG++ RN + L + V D+G YQC + + V +
Sbjct: 298 WIKEDGMLPANRTFYRNFKKTLQITHVSEADSGNYQCIAKNALGAVHHTISVTVKAAPYW 357
Query: 100 IASSNQVVVDVGHRIELHCRVS--PK-RLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDA 156
I + +V+ G L CR + PK R+S WL +G+ + + LD R+
Sbjct: 358 IVAPQNLVLSPGENGTLICRANGNPKPRIS----WLTNGVPIE------IALDDPSRK-- 405
Query: 157 GMYQCHIEDGKYHMLSSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTEN 216
+ +I V ES YQC NK L N L E
Sbjct: 406 --------------IDGDTIIFSNVQESSS-AVYQCNASNKY---GYLLANAFVNVLAEP 447
Query: 217 KRLLSAAKMFEKHRILNVKKDESVILPCSAQGNPLPTIKWYK--QDSPVEESDRIQRIGS 274
R+L++A + + V + +L C+ G+P+PTI+W+K + S + E +
Sbjct: 448 PRILTSA-----NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVLHDNG 502
Query: 275 SLSISHVEESDSGVWNCVANNSEGQDKMQLFIQ 307
+L I ++ +G + CVA N G K ++ ++
Sbjct: 503 TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLE 535
Score = 53.1 bits (126), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 176 LIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRILNVK 235
L I V E+D +YQC N L G + T + + +A + L +
Sbjct: 319 LQITHVSEADS-GNYQCIAKNAL----------GAVHHTISVTVKAAPYWIVAPQNLVLS 367
Query: 236 KDESVILPCSAQGNPLPTIKWYKQDSPVEES--DRIQRI-GSSLSISHVEESDSGVWNCV 292
E+ L C A GNP P I W P+E + D ++I G ++ S+V+ES S V+ C
Sbjct: 368 PGENGTLICRANGNPKPRISWLTNGVPIEIALDDPSRKIDGDTIIFSNVQESSSAVYQCN 427
Query: 293 ANNSEGQDKMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDE 352
A+N G ++L++ ++ + E + L SA +++ V +
Sbjct: 428 ASNKYG---------------YLLANA--FVNVLAEPPRILTSANTLYQ------VIANR 464
Query: 353 SVILPCSAQGNPLPTIKY 370
+L C+ G+P+PTI++
Sbjct: 465 PALLDCAFFGSPMPTIEW 482
Score = 52.4 bits (124), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 242 LPCSAQGNPLPTIKWYKQDSPVEESDRIQR-IGSSLSISHVEESDSGVWNCVANNSEGQD 300
L C A+G P P I W K+D + + R +L I+HV E+DSG + C+A N+ G
Sbjct: 284 LECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQITHVSEADSGNYQCIAKNALGAV 343
Query: 301 KMQLFIQYAHGKYHMLSSGELIIHQVDEKNKRLLSAAKMFEKHRILNVKKDESVILPCSA 360
+ + Y +++ L++ E+ L C A
Sbjct: 344 HHTISVTVKAAPYWIVAPQNLVL-------------------------SPGENGTLICRA 378
Query: 361 QGNPLPTIKY 370
GNP P I +
Sbjct: 379 NGNPKPRISW 388
Score = 40.4 bits (93), Expect = 0.024, Method: Composition-based stats.
Identities = 66/307 (21%), Positives = 119/307 (38%), Gaps = 55/307 (17%)
Query: 5 IQVKSSLSIEMSPSGQVVVDVGHRIELHCRVS--PK-RLSSAKAWLKDGLVL-------- 53
+ VK++ ++P +V+ G L CR + PK R+S WL +G+ +
Sbjct: 349 VTVKAAPYWIVAPQ-NLVLSPGENGTLICRANGNPKPRIS----WLTNGVPIEIALDDPS 403
Query: 54 RRNSDEVLVLDRVQREDAGMYQCHVSADDDSAQMSAQVILGGELVEI-ASSNQVVVDVGH 112
R+ + ++ VQ + +YQC+ S +A V + E I S+N + + +
Sbjct: 404 RKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEPPRILTSANTLYQVIAN 463
Query: 113 RIEL-HCRVSPKRLSSAKAWLKDGLVLRRNSDEVLVLDRVQREDAGMYQCHIEDGKYHML 171
R L C + + + W K G + + Y +
Sbjct: 464 RPALLDCAFFGSPMPTIE-WFK-----------------------GTKGSALHEDIYVLH 499
Query: 172 SSGELIIHQVDESDRYRSYQCRGVNKLTGASLLSVNRGRLSLTENKRLLSAAKMFEKHRI 231
+G L I V + D +Y C NKL A N L + + R++ ++
Sbjct: 500 DNGTLEI-PVAQKDSTGTYTCVARNKLGMAK----NEVHLEIKDPTRII------KQPEY 548
Query: 232 LNVKKDESVILPCSAQGNP--LPTIKWYKQDSPVEESDRIQRIGSSLSISHVEESDSGVW 289
V++ V C + + +PTI W K + + +R L +S V++ D G +
Sbjct: 549 AVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERFSTDKDHLVVSDVKDDDGGTY 608
Query: 290 NCVANNS 296
C AN +
Sbjct: 609 TCTANTT 615
Score = 35.8 bits (81), Expect = 0.54, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 2 QLFIQVKSSLSIEMSPSGQVVVDVGHRIELHCRVSPKR-LSSAKAWLKDGLVL----RRN 56
++ +++K I P VV G ++ CRV L WLKD L R +
Sbjct: 531 EVHLEIKDPTRIIKQPE-YAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERFS 589
Query: 57 SD-EVLVLDRVQREDAGMYQCHVSADDDSAQMSA 89
+D + LV+ V+ +D G Y C + DSA SA
Sbjct: 590 TDKDHLVVSDVKDDDGGTYTCTANTTLDSASASA 623
Score = 32.0 bits (71), Expect = 7.4, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 238 ESVILPCSAQGNPLPTIKWYKQDSPVE-ESDRI--QRIGSSLSISHV-----EESDSGVW 289
E++++ C A+G P P+ W + + + + D + + GS + ++ E+ GV+
Sbjct: 56 ENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVY 115
Query: 290 NCVANNSEG 298
C A N G
Sbjct: 116 QCTARNERG 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,850,445
Number of Sequences: 539616
Number of extensions: 5380727
Number of successful extensions: 20820
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 401
Number of HSP's that attempted gapping in prelim test: 15648
Number of HSP's gapped (non-prelim): 3848
length of query: 371
length of database: 191,569,459
effective HSP length: 119
effective length of query: 252
effective length of database: 127,355,155
effective search space: 32093499060
effective search space used: 32093499060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)