BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14548
(482 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P91622|PDK_DROME [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial
OS=Drosophila melanogaster GN=Pdk PE=2 SV=2
Length = 413
Score = 568 bits (1464), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/399 (70%), Positives = 327/399 (81%), Gaps = 11/399 (2%)
Query: 13 KMLDFYSQFNPSPLSIKQFIDFGLSASEEKSFMFLRKELPVRLANIMKEIHLLPDNLLRM 72
KMLDFYS FNPSPLSIKQF+DFG +A E+KS++FLRKELPVRLANIMKEI LLPDNLL
Sbjct: 20 KMLDFYSGFNPSPLSIKQFMDFGQNACEKKSYIFLRKELPVRLANIMKEIALLPDNLLHT 79
Query: 73 PSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQGVMELK 132
SV V+ WY SF+++L +EKA+ + D L KF L IRNRH+DVVQTMAQGV+E+K
Sbjct: 80 RSVSEVSSWYVKSFEDVLVYEKAEP-THDNLQKFVADLDLIRNRHNDVVQTMAQGVIEMK 138
Query: 133 DSH--DVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCIDPQ 190
++ VD TE+SIQYFLDR YMSRISIRMLINQHTLLFG G RHIGC+DP
Sbjct: 139 ENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGGNPHAGG---RHIGCLDPA 195
Query: 191 CDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGE--PVRIIYVPSHLYHMLFEL 248
CDL VV+DAYENARFLC+QYYL+SP L++ +H+ E G+ P+R +YVPSHLY+MLFEL
Sbjct: 196 CDLSDVVRDAYENARFLCDQYYLTSPALEIQQHSS-EPGDNLPIRTVYVPSHLYYMLFEL 254
Query: 249 FKNSMRATVEHH--TDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYST 306
FKNSMRA VEHH + D LPP++V++ +GKEDICVK+SD+GGGIPRS TD LF YMYST
Sbjct: 255 FKNSMRAVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYST 314
Query: 307 APQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANE 366
APQPSKSD HTVPLAGYGYGLPISRLYARYFHGDI+LLSC+G GTDAIIYLKALS+EANE
Sbjct: 315 APQPSKSDLHTVPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANE 374
Query: 367 LLPIFNKTSSKFYRATIPTGDWSSTQSACMEHRHPTISQ 405
LLPIFNKTSSKFYRAT+PTGDWS+ + + ++Q
Sbjct: 375 LLPIFNKTSSKFYRATVPTGDWSNQVKYAKKKKTSAVNQ 413
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 69/75 (92%)
Query: 408 TSSKHVPSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEAN 467
T+ + SD HTVPLAGYGYGLPISRLYARYFHGDI+LLSC+G GTDAIIYLKALS+EAN
Sbjct: 314 TAPQPSKSDLHTVPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEAN 373
Query: 468 ELLPIFNKTSSKFYR 482
ELLPIFNKTSSKFYR
Sbjct: 374 ELLPIFNKTSSKFYR 388
>sp|Q63065|PDK1_RAT [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,
mitochondrial OS=Rattus norvegicus GN=Pdk1 PE=1 SV=1
Length = 434
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/395 (58%), Positives = 294/395 (74%), Gaps = 11/395 (2%)
Query: 9 ASVSKMLDFYSQFNPSPLSIKQFIDFG-LSASEEKSFMFLRKELPVRLANIMKEIHLLPD 67
+ V +DFY++F+PSPLS+KQF+DFG ++A E+ SFMFLR+ELPVRLANIMKEI LLPD
Sbjct: 40 SGVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPD 99
Query: 68 NLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQG 127
NLLR PSV LV WY S E+L+F+ + T+ +F +++IRNRH+DV+ TMAQG
Sbjct: 100 NLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKTIYEFTDTVIRIRNRHNDVIPTMAQG 159
Query: 128 VMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLR-HIGC 186
V E K+S VD T ++QYFLDRFYMSRISIRML+NQH+LLFG +G S R HIG
Sbjct: 160 VTEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGG---KGSPSHRKHIGS 216
Query: 187 IDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLF 246
I+P CD++ V+KD YENAR LC+ YY++SPEL++ E N G+P++++YVPSHLYHM+F
Sbjct: 217 INPNCDVVEVIKDGYENARRLCDLYYVNSPELELEELNAKSPGQPIQVVYVPSHLYHMVF 276
Query: 247 ELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYST 306
ELFKN+MRAT+EHH D V PPI+V V G+ED+ VKMSD+GGG+P D LF+YMYST
Sbjct: 277 ELFKNAMRATMEHHADKGVYPPIQVHVTLGEEDLTVKMSDRGGGVPLRKIDRLFNYMYST 336
Query: 307 APQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANE 366
AP+P + VPLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IY+KALS E+ E
Sbjct: 337 APRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTESIE 396
Query: 367 LLPIFNKTSSKFYRATIPTGDWSSTQSACMEHRHP 401
LP++NK + K YR DW C+ R P
Sbjct: 397 RLPVYNKAAWKHYRTNHEADDW------CVPSREP 425
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%)
Query: 417 AHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIFNKT 476
+ VPLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IY+KALS E+ E LP++NK
Sbjct: 345 SRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTESIERLPVYNKA 404
Query: 477 SSKFYR 482
+ K YR
Sbjct: 405 AWKHYR 410
>sp|Q8BFP9|PDK1_MOUSE [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,
mitochondrial OS=Mus musculus GN=Pdk1 PE=2 SV=2
Length = 434
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/394 (58%), Positives = 293/394 (74%), Gaps = 11/394 (2%)
Query: 10 SVSKMLDFYSQFNPSPLSIKQFIDFG-LSASEEKSFMFLRKELPVRLANIMKEIHLLPDN 68
V +DFY++F+PSPLS+KQF+DFG ++A E+ SFMFLR+ELPVRLANIMKEI LLPDN
Sbjct: 41 GVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDN 100
Query: 69 LLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQGV 128
LLR PSV LV WY S E+L+F+ + T+ +F +++IRNRH+DV+ TMAQGV
Sbjct: 101 LLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKTIYEFTDTVIRIRNRHNDVIPTMAQGV 160
Query: 129 MELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLR-HIGCI 187
E K+S VD T ++QYFLDRFYMSRISIRML+NQH+LLFG +G S R HIG I
Sbjct: 161 TEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGG---KGSPSHRKHIGSI 217
Query: 188 DPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLFE 247
+P CD++ V+KD YENAR LC+ YY++SPEL++ E N G+ ++++YVPSHLYHM+FE
Sbjct: 218 NPNCDVVEVIKDGYENARRLCDLYYVNSPELELEELNAKSPGQTIQVVYVPSHLYHMVFE 277
Query: 248 LFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTA 307
LFKN+MRAT+EHH D V PPI+V V G+ED+ VKMSD+GGG+P D LF+YMYSTA
Sbjct: 278 LFKNAMRATMEHHADKGVYPPIQVHVTLGEEDLTVKMSDRGGGVPLRKIDRLFNYMYSTA 337
Query: 308 PQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANEL 367
P+P + VPLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IY+KALS E+ E
Sbjct: 338 PRPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTESVER 397
Query: 368 LPIFNKTSSKFYRATIPTGDWSSTQSACMEHRHP 401
LP++NK + K Y+A DW C+ R P
Sbjct: 398 LPVYNKAAWKHYKANHEADDW------CVPSREP 425
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 417 AHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIFNKT 476
+ VPLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IY+KALS E+ E LP++NK
Sbjct: 345 SRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTESVERLPVYNKA 404
Query: 477 SSKFYR 482
+ K Y+
Sbjct: 405 AWKHYK 410
>sp|Q15118|PDK1_HUMAN [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,
mitochondrial OS=Homo sapiens GN=PDK1 PE=1 SV=1
Length = 436
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/393 (56%), Positives = 289/393 (73%), Gaps = 7/393 (1%)
Query: 10 SVSKMLDFYSQFNPSPLSIKQFIDFG-LSASEEKSFMFLRKELPVRLANIMKEIHLLPDN 68
V +DFY++F+PSPLS+KQF+DFG ++A E+ SFMFLR+ELPVRLANIMKEI LLPDN
Sbjct: 41 GVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDN 100
Query: 69 LLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQGV 128
LLR PSV LV WY S E+L+F+ + + F +++IRNRH+DV+ TMAQGV
Sbjct: 101 LLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGV 160
Query: 129 MELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCID 188
+E K+S VD T ++QYFLDRFYMSRISIRML+NQH+LLFG + S +HIG I+
Sbjct: 161 IEYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSIN 220
Query: 189 PQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLFEL 248
P C+++ V+KD YENAR LC+ YY++SPEL++ E N G+P++++YVPSHLYHM+FEL
Sbjct: 221 PNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFEL 280
Query: 249 FKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTAP 308
FKN+MRAT+EHH + V PPI+V V G ED+ VKMSD+GGG+P D LF+YMYSTAP
Sbjct: 281 FKNAMRATMEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAP 340
Query: 309 QPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELL 368
+P + VPLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IY+KALS ++ E L
Sbjct: 341 RPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERL 400
Query: 369 PIFNKTSSKFYRATIPTGDWSSTQSACMEHRHP 401
P++NK + K Y DW C+ R P
Sbjct: 401 PVYNKAAWKHYNTNHEADDW------CVPSREP 427
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 52/65 (80%)
Query: 417 AHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIFNKT 476
+ VPLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IY+KALS ++ E LP++NK
Sbjct: 347 SRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERLPVYNKA 406
Query: 477 SSKFY 481
+ K Y
Sbjct: 407 AWKHY 411
>sp|Q922H2|PDK3_MOUSE [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3,
mitochondrial OS=Mus musculus GN=Pdk3 PE=2 SV=1
Length = 415
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/402 (56%), Positives = 285/402 (70%), Gaps = 4/402 (0%)
Query: 11 VSKMLDFYSQFNPSPLSIKQFIDFGL-SASEEKSFMFLRKELPVRLANIMKEIHLLPDNL 69
V K ++ YS+F+PSPLSIKQF+DFG +A E+ S+MFLRKELPVRLAN M+E++LLPDNL
Sbjct: 12 VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNL 71
Query: 70 LRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQGVM 129
L PSVGLV WY SF E+LE+E LD F L+ IRNRH+DVV TMAQGV+
Sbjct: 72 LNRPSVGLVQSWYMQSFLELLEYENKSPEDPRVLDNFLNVLINIRNRHNDVVPTMAQGVI 131
Query: 130 ELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCIDP 189
E K+ D ++IQYFLDRFY +RIS RMLINQHTLLFG + +HIG IDP
Sbjct: 132 EYKEKFGFDPFISSNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPAHP--KHIGSIDP 189
Query: 190 QCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLFELF 249
C++ VVKDAYE A+ LCEQYYL +PEL+V E N +P++++YVPSHL+HMLFELF
Sbjct: 190 TCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPNKPIQVVYVPSHLFHMLFELF 249
Query: 250 KNSMRATVEHHTD-TDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTAP 308
KNSMRATVE H D + P ++ V GKED+ +K+SD GGG+P D LF+YMYSTAP
Sbjct: 250 KNSMRATVELHEDKKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAP 309
Query: 309 QPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELL 368
+PS PLAG+GYGLPISRLYARYF GD+ L S +G+GTDA+IYLKALS+E+ E L
Sbjct: 310 RPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERL 369
Query: 369 PIFNKTSSKFYRATIPTGDWSSTQSACMEHRHPTISQSKTSS 410
P+FNK++ + Y+ T DWS+ S + Q K S
Sbjct: 370 PVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQDKIKS 411
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 54/66 (81%)
Query: 417 AHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIFNKT 476
PLAG+GYGLPISRLYARYF GD+ L S +G+GTDA+IYLKALS+E+ E LP+FNK+
Sbjct: 316 TRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKS 375
Query: 477 SSKFYR 482
+ + Y+
Sbjct: 376 AWRHYK 381
>sp|Q15120|PDK3_HUMAN [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3,
mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1
Length = 406
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/388 (58%), Positives = 285/388 (73%), Gaps = 10/388 (2%)
Query: 11 VSKMLDFYSQFNPSPLSIKQFIDFGL-SASEEKSFMFLRKELPVRLANIMKEIHLLPDNL 69
V K ++ YS+F+PSPLSIKQF+DFG +A E+ S+MFLRKELPVRLAN M+E++LLPDNL
Sbjct: 12 VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNL 71
Query: 70 LRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQGVM 129
L PSVGLV WY SF E+LE+E LD F + L+K+RNRH+DVV TMAQGV+
Sbjct: 72 LNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVI 131
Query: 130 ELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSS---LRHIGC 186
E K+ D +IQYFLDRFY +RIS RMLINQHTLLFG GD++ +HIG
Sbjct: 132 EYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFG-----GDTNPVHPKHIGS 186
Query: 187 IDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLF 246
IDP C++ VVKDAYE A+ LCEQYYL +PEL+V E N +P++++YVPSHL+HMLF
Sbjct: 187 IDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLF 246
Query: 247 ELFKNSMRATVEHHTD-TDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYS 305
ELFKNSMRATVE + D + P ++ V GKED+ +K+SD GGG+P D LF+YMYS
Sbjct: 247 ELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYS 306
Query: 306 TAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEAN 365
TAP+PS PLAG+GYGLPISRLYARYF GD+ L S +G+GTDA+IYLKALS+E+
Sbjct: 307 TAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESF 366
Query: 366 ELLPIFNKTSSKFYRATIPTGDWSSTQS 393
E LP+FNK++ + Y+ T DWS+ S
Sbjct: 367 ERLPVFNKSAWRHYKTTPEADDWSNPSS 394
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 54/66 (81%)
Query: 417 AHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIFNKT 476
PLAG+GYGLPISRLYARYF GD+ L S +G+GTDA+IYLKALS+E+ E LP+FNK+
Sbjct: 316 TRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKS 375
Query: 477 SSKFYR 482
+ + Y+
Sbjct: 376 AWRHYK 381
>sp|Q15119|PDK2_HUMAN [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,
mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2
Length = 407
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/381 (57%), Positives = 282/381 (74%), Gaps = 4/381 (1%)
Query: 9 ASVSKMLDFYSQFNPSPLSIKQFIDFGLS-ASEEKSFMFLRKELPVRLANIMKEIHLLPD 67
A K ++ +S+F+PSPLS+KQF+DFG S A E+ SF FLR+ELPVRLANIMKEI+LLPD
Sbjct: 14 AGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPD 73
Query: 68 NLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQG 127
+L PSV LV WY S +I+EF D TL +F ALV IRNRH+DVV TMAQG
Sbjct: 74 RVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQG 133
Query: 128 VMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCI 187
V+E KD++ D + +IQYFLDRFY+SRISIRMLINQHTL+F + + + +HIG I
Sbjct: 134 VLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF--DGSTNPAHPKHIGSI 191
Query: 188 DPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLFE 247
DP C++ VVKDAY+ A+ LC++YY++SP+L++ E N +P+ ++YVPSHLYHMLFE
Sbjct: 192 DPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFE 251
Query: 248 LFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTA 307
LFKN+MRATVE H + +LPPI+V V G+ED+ +KMSD+GGG+P + LF YMYSTA
Sbjct: 252 LFKNAMRATVESHESSLILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTA 311
Query: 308 PQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANEL 367
P P T PLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IYLKALS ++ E
Sbjct: 312 PTPQPGTGGT-PLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVER 370
Query: 368 LPIFNKTSSKFYRATIPTGDW 388
LP++NK++ + Y+ GDW
Sbjct: 371 LPVYNKSAWRHYQTIQEAGDW 391
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 52/63 (82%)
Query: 420 VPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIFNKTSSK 479
PLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IYLKALS ++ E LP++NK++ +
Sbjct: 321 TPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWR 380
Query: 480 FYR 482
Y+
Sbjct: 381 HYQ 383
>sp|O54937|PDK4_RAT [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,
mitochondrial OS=Rattus norvegicus GN=Pdk4 PE=1 SV=1
Length = 412
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/407 (53%), Positives = 288/407 (70%), Gaps = 16/407 (3%)
Query: 2 RFTLRRCAS------VSKMLDFYSQFNPSPLSIKQFIDFGL-SASEEKSFMFLRKELPVR 54
RF +R +S V + ++ +S+++PSPLS+KQ +DFG +A E SF FLR+ELPVR
Sbjct: 5 RFVMRSASSLGNAGLVPREVELFSRYSPSPLSMKQLLDFGSENACERTSFSFLRQELPVR 64
Query: 55 LANIMKEIHLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIR 114
LANI+KEI +LP++L+ PSV LV WY S +++EF + L F LVK+R
Sbjct: 65 LANILKEIDILPEHLVNTPSVQLVKSWYIQSLMDLVEFHEKSPEDQKVLSDFVDTLVKVR 124
Query: 115 NRHSDVVQTMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDEL 174
NRH +VV TMAQG++E KD+ VD T ++QYFLDRFYM+RIS RML+NQH L+F D
Sbjct: 125 NRHHNVVPTMAQGILEYKDNCTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSK 184
Query: 175 TRGDSSLRHIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRI 234
T S HIG IDP CD++ VV+DA+E A+ LC+QYYL+SPELK+T+ N G+P+ I
Sbjct: 185 TGNPS---HIGSIDPNCDVVAVVEDAFECAKMLCDQYYLTSPELKLTQVNGKFPGQPIHI 241
Query: 235 IYVPSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRS 294
+YVPSHL+HMLFELFKN+MRATVEH + L P+E +VV GKED+ +K+SD+GGG+P
Sbjct: 242 VYVPSHLHHMLFELFKNAMRATVEHQENRPFLTPVEATVVLGKEDLTIKISDRGGGVPLR 301
Query: 295 VTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAI 354
+TD LF Y YSTAP P ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAI
Sbjct: 302 ITDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAI 361
Query: 355 IYLKALSNEANELLPIFNKTSSKFYRATIPTGDWSSTQSACMEHRHP 401
IYLKALS+E+ E LP+FNK++ K Y+ + DW C+ + P
Sbjct: 362 IYLKALSSESIEKLPVFNKSAFKHYQMSSEADDW------CIPSKEP 402
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 408 TSSKHVPSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEAN 467
T+ V ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAIIYLKALS+E+
Sbjct: 313 TAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAIIYLKALSSESI 372
Query: 468 ELLPIFNKTSSKFYR 482
E LP+FNK++ K Y+
Sbjct: 373 EKLPVFNKSAFKHYQ 387
>sp|Q9JK42|PDK2_MOUSE [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,
mitochondrial OS=Mus musculus GN=Pdk2 PE=1 SV=2
Length = 407
Score = 451 bits (1160), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/381 (56%), Positives = 280/381 (73%), Gaps = 4/381 (1%)
Query: 9 ASVSKMLDFYSQFNPSPLSIKQFIDFGLS-ASEEKSFMFLRKELPVRLANIMKEIHLLPD 67
A K ++ +S+F+PSPLS+KQF+DFG S A E+ SF FLR+ELPVRLANIMKEI+LLPD
Sbjct: 14 AGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPD 73
Query: 68 NLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQG 127
+L PSV LV WY S +I+EF D TL +F ALV IRNRH+DVV TMAQG
Sbjct: 74 RVLGTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQG 133
Query: 128 VMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCI 187
V+E KD++ D + +IQYFLDRFY+SRISIRMLINQHTL+F + + + +HIG I
Sbjct: 134 VLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF--DGSTNPAHPKHIGSI 191
Query: 188 DPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLFE 247
DP C + VVKDAY+ A+ LC++YY++SP+L++ E N +P+ ++YVPSHLYHMLFE
Sbjct: 192 DPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNANQPIHMVYVPSHLYHMLFE 251
Query: 248 LFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTA 307
LFKN+MRATVE H + LPPI++ V G+ED+ +KMSD+GGG+P + LF YMYSTA
Sbjct: 252 LFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTA 311
Query: 308 PQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANEL 367
P P T PLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IYLKALS ++ E
Sbjct: 312 PTPQPGTGGT-PLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVER 370
Query: 368 LPIFNKTSSKFYRATIPTGDW 388
LP++NK++ + Y+ GDW
Sbjct: 371 LPVYNKSAWRHYQTIQEAGDW 391
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 52/63 (82%)
Query: 420 VPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIFNKTSSK 479
PLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IYLKALS ++ E LP++NK++ +
Sbjct: 321 TPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWR 380
Query: 480 FYR 482
Y+
Sbjct: 381 HYQ 383
>sp|O70571|PDK4_MOUSE [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,
mitochondrial OS=Mus musculus GN=Pdk4 PE=2 SV=1
Length = 412
Score = 451 bits (1160), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/392 (55%), Positives = 281/392 (71%), Gaps = 10/392 (2%)
Query: 11 VSKMLDFYSQFNPSPLSIKQFIDFGL-SASEEKSFMFLRKELPVRLANIMKEIHLLPDNL 69
V + ++ +S+++PSPLS+KQ +DFG +A E SF FLR+ELPVRLANI+KEI +LPD L
Sbjct: 20 VPREVELFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPDRL 79
Query: 70 LRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQGVM 129
+ PSV LV WY S +++EF + L +F LVK+RNRH +VV TMAQG++
Sbjct: 80 VNTPSVQLVKSWYIQSLMDLVEFHEKSPEDQKALSEFVDTLVKVRNRHHNVVPTMAQGIL 139
Query: 130 ELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCIDP 189
E KD+ VD T ++QYFLDRFYM+RIS RML+NQH L+F D T S HIG IDP
Sbjct: 140 EYKDTCTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSKTGNPS---HIGSIDP 196
Query: 190 QCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLFELF 249
CD++ VV+DA+E A+ LC+QYYL+SPEL +T+ N G+P+ I+YVPSHL+HMLFELF
Sbjct: 197 NCDVVAVVQDAFECAKMLCDQYYLTSPELNLTQVNGKFPGQPIHIVYVPSHLHHMLFELF 256
Query: 250 KNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTAPQ 309
KN+MRATVEH + L P+E +VV GKED+ +K+SD+GGG+P +TD LF Y YSTAP
Sbjct: 257 KNAMRATVEHQENRPSLTPVEATVVLGKEDLTIKISDRGGGVPLRITDRLFSYTYSTAPT 316
Query: 310 PSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLP 369
P ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAIIYLKALS+E+ E LP
Sbjct: 317 PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAIIYLKALSSESVEKLP 376
Query: 370 IFNKTSSKFYRATIPTGDWSSTQSACMEHRHP 401
+FNK++ K Y+ + DW C+ R P
Sbjct: 377 VFNKSAFKHYQMSSEADDW------CIPSREP 402
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 408 TSSKHVPSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEAN 467
T+ V ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAIIYLKALS+E+
Sbjct: 313 TAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAIIYLKALSSESV 372
Query: 468 ELLPIFNKTSSKFYR 482
E LP+FNK++ K Y+
Sbjct: 373 EKLPVFNKSAFKHYQ 387
>sp|Q1KMR4|PDK4_RHIFE [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,
mitochondrial OS=Rhinolophus ferrumequinum GN=PDK4 PE=2
SV=1
Length = 412
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/407 (54%), Positives = 287/407 (70%), Gaps = 16/407 (3%)
Query: 2 RFTLRRCASVS------KMLDFYSQFNPSPLSIKQFIDFGL-SASEEKSFMFLRKELPVR 54
RF +R S+S + ++ +S+++PSPLS+KQ +DFG +A E S FLR+ELPVR
Sbjct: 5 RFVMRSARSLSSAGLVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSSAFLRQELPVR 64
Query: 55 LANIMKEIHLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIR 114
LANI+KEI +LPD L+ SV LV WY S E++EF + + L F L+ +R
Sbjct: 65 LANILKEIDILPDRLVNTSSVQLVKSWYIQSLMELVEFHERSPDDQKVLSDFVDTLITVR 124
Query: 115 NRHSDVVQTMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDEL 174
NRH +VV TMAQG++E KDS VD T ++QYFLDRFYM+RIS RML+NQH L+F D
Sbjct: 125 NRHHNVVPTMAQGIIEYKDSCTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQ 184
Query: 175 TRGDSSLRHIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRI 234
T S HIG IDP C++ VV+DA+E +R LC+QYYL+SPELK+T+ N GEP+ I
Sbjct: 185 TGNPS---HIGSIDPNCNVAAVVQDAFECSRMLCDQYYLTSPELKLTQVNGKFPGEPIHI 241
Query: 235 IYVPSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRS 294
+YVPSHL+HMLFELFKN+MRATVEH + L P+EV+VV GKED+ +K+SD+GGG+P
Sbjct: 242 VYVPSHLHHMLFELFKNAMRATVEHQENEPSLTPVEVTVVLGKEDLTIKISDRGGGVPLR 301
Query: 295 VTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAI 354
+TD LF YMYSTAP P ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAI
Sbjct: 302 ITDRLFSYMYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLHLYSLSGYGTDAI 361
Query: 355 IYLKALSNEANELLPIFNKTSSKFYRATIPTGDWSSTQSACMEHRHP 401
IYLKALS+E+ E LP+FNK++ K Y+ +I DW C+ + P
Sbjct: 362 IYLKALSSESVEKLPVFNKSAFKHYQMSIEADDW------CIPSKEP 402
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 408 TSSKHVPSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEAN 467
T+ V ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAIIYLKALS+E+
Sbjct: 313 TAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLHLYSLSGYGTDAIIYLKALSSESV 372
Query: 468 ELLPIFNKTSSKFYR 482
E LP+FNK++ K Y+
Sbjct: 373 EKLPVFNKSAFKHYQ 387
>sp|Q64536|PDK2_RAT [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,
mitochondrial OS=Rattus norvegicus GN=Pdk2 PE=1 SV=1
Length = 407
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/381 (56%), Positives = 280/381 (73%), Gaps = 4/381 (1%)
Query: 9 ASVSKMLDFYSQFNPSPLSIKQFIDFGLS-ASEEKSFMFLRKELPVRLANIMKEIHLLPD 67
A K ++ +S+F+PSPLS+KQF+DFG S A E+ SF FLR+ELPVRLANIMKEI+LLPD
Sbjct: 14 AGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPD 73
Query: 68 NLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQG 127
+L PSV LV WY S +I+EF D TL +F ALV IRNRH+DVV TMAQG
Sbjct: 74 RVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQG 133
Query: 128 VMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCI 187
V+E KD++ D + +IQYFLDRFY+SRISIRMLINQHTL+F + + + +HIG I
Sbjct: 134 VLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF--DGSTNPAHPKHIGSI 191
Query: 188 DPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLFE 247
DP C + VVKDAY+ A+ LC++YY++SP+L++ E N +P+ ++YVPSHLYHMLFE
Sbjct: 192 DPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVYVPSHLYHMLFE 251
Query: 248 LFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTA 307
LFKN+MRATVE H + LPPI++ V G+ED+ +KMSD+GGG+P + LF YMYSTA
Sbjct: 252 LFKNAMRATVESHESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTA 311
Query: 308 PQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANEL 367
P P T PLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IYLKALS ++ E
Sbjct: 312 PTPQPGTGGT-PLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVER 370
Query: 368 LPIFNKTSSKFYRATIPTGDW 388
LP++NK++ + Y+ GDW
Sbjct: 371 LPVYNKSAWRHYQTIQEAGDW 391
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 52/63 (82%)
Query: 420 VPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIFNKTSSK 479
PLAG+GYGLPISRLYA+YF GD+ L S +G GTDA+IYLKALS ++ E LP++NK++ +
Sbjct: 321 TPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWR 380
Query: 480 FYR 482
Y+
Sbjct: 381 HYQ 383
>sp|O88345|PDK4_SPETR [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,
mitochondrial OS=Spermophilus tridecemlineatus GN=PDK4
PE=2 SV=1
Length = 412
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/399 (54%), Positives = 282/399 (70%), Gaps = 10/399 (2%)
Query: 4 TLRRCASVSKMLDFYSQFNPSPLSIKQFIDFGL-SASEEKSFMFLRKELPVRLANIMKEI 62
+L V + ++ +S+++PSPLS+KQ +DFG +A E SF FLR+ELPVRLANI+KEI
Sbjct: 13 SLSSVGLVPREVELFSRYSPSPLSMKQLLDFGSDNACERTSFSFLRQELPVRLANILKEI 72
Query: 63 HLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQ 122
+LPD L SV LV WY S E++EF + L F L+K+RNRH +VV
Sbjct: 73 DVLPDRLTNTSSVQLVKSWYIQSLMELVEFHEKSPEDQKNLSDFVDTLIKVRNRHHNVVP 132
Query: 123 TMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLR 182
TMAQG++E KD+ VD T S+QYFLDRFYM+RIS RML+NQH L+F D T S
Sbjct: 133 TMAQGILEYKDTCTVDPVTNQSLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPS--- 189
Query: 183 HIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLY 242
HIG IDP+CD++ V++DA+E+++ LC+QYYL+SPELK+T+ N G+P+ I+YVPSHL+
Sbjct: 190 HIGSIDPKCDVVAVIQDAFESSKMLCDQYYLTSPELKLTQVNGKFPGQPIHIVYVPSHLH 249
Query: 243 HMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHY 302
HMLFELFKN+MRATVE L P+EV VV GKED+ +K+SD+GGG+P +TD LF Y
Sbjct: 250 HMLFELFKNAMRATVERQESWPSLTPVEVIVVLGKEDLTIKISDRGGGVPLRITDRLFSY 309
Query: 303 MYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSN 362
MYSTAP P ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAIIYLKALS+
Sbjct: 310 MYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSS 369
Query: 363 EANELLPIFNKTSSKFYRATIPTGDWSSTQSACMEHRHP 401
E+ E LP+FNK++ K Y+ + DW C+ R P
Sbjct: 370 ESVEKLPVFNKSAFKHYQMSSEADDW------CIPSREP 402
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 408 TSSKHVPSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEAN 467
T+ V ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAIIYLKALS+E+
Sbjct: 313 TAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESV 372
Query: 468 ELLPIFNKTSSKFYR 482
E LP+FNK++ K Y+
Sbjct: 373 EKLPVFNKSAFKHYQ 387
>sp|Q16654|PDK4_HUMAN [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,
mitochondrial OS=Homo sapiens GN=PDK4 PE=1 SV=1
Length = 411
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/407 (54%), Positives = 283/407 (69%), Gaps = 16/407 (3%)
Query: 2 RFTLRRCAS------VSKMLDFYSQFNPSPLSIKQFIDFGL-SASEEKSFMFLRKELPVR 54
RF LR S V + ++ +S+++PSPLS+KQ +DFG +A E SF FLR+ELPVR
Sbjct: 5 RFVLRSAGSLNGAGLVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVR 64
Query: 55 LANIMKEIHLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIR 114
LANI+KEI +LP L+ SV LV WY S +++EF + + L F L+K+R
Sbjct: 65 LANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVR 124
Query: 115 NRHSDVVQTMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDEL 174
NRH +VV TMAQG++E KD+ VD T ++QYFLDRFYM+RIS RML+NQH L+F D
Sbjct: 125 NRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQ 184
Query: 175 TRGDSSLRHIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRI 234
T S HIG IDP CD++ VV+DA+E +R LC+QYYLSSPELK+T+ N +P+ I
Sbjct: 185 TGNPS---HIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHI 241
Query: 235 IYVPSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRS 294
+YVPSHL+HMLFELFKN+MRATVEH + L PIEV VV GKED+ +K+SD+GGG+P
Sbjct: 242 VYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLR 301
Query: 295 VTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAI 354
+ D LF Y YSTAP P ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAI
Sbjct: 302 IIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAI 361
Query: 355 IYLKALSNEANELLPIFNKTSSKFYRATIPTGDWSSTQSACMEHRHP 401
IYLKALS+E+ E LP+FNK++ K Y+ + DW C+ R P
Sbjct: 362 IYLKALSSESIEKLPVFNKSAFKHYQMSSEADDW------CIPSREP 402
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 408 TSSKHVPSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEAN 467
T+ V ++ PLAG+GYGLPISRLYA+YF GD+ L S G GTDAIIYLKALS+E+
Sbjct: 313 TAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESI 372
Query: 468 ELLPIFNKTSSKFYR 482
E LP+FNK++ K Y+
Sbjct: 373 EKLPVFNKSAFKHYQ 387
>sp|O02623|PDK_ASCSU [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial
OS=Ascaris suum PE=2 SV=1
Length = 399
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/382 (56%), Positives = 284/382 (74%), Gaps = 5/382 (1%)
Query: 8 CASVSKMLDFYSQFNPSPLSIKQFIDFGLSASEEKSFMFLRKELPVRLANIMKEIHLLPD 67
+++++ L+ YSQF PS L+I+Q++DFG + + + SF+FL+ EL VRLANIM+EI LLP
Sbjct: 12 TSAIARKLEHYSQFQPSSLTIQQYLDFGQTGTMKSSFLFLKNELLVRLANIMQEISLLPP 71
Query: 68 NLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQG 127
LL+MPS LV+ WY SF+++L+FE A D + KF L I RHS VV+TMA+G
Sbjct: 72 TLLKMPSRRLVSNWYCESFEDLLQFEHAQVEP-DIMSKFNDQLQTILKRHSRVVETMAEG 130
Query: 128 VMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCI 187
++EL++S VD +E IQYFLDRFY++RISIRML NQH ++FG L S RHIGCI
Sbjct: 131 LIELRESEGVDIASERGIQYFLDRFYINRISIRMLQNQHLVVFGVVLP---ESPRHIGCI 187
Query: 188 DPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHMLFE 247
DP CD+ VV DAYENARFLCE+YYL++P +K+ HN G P+ I+ VPSHLYH++FE
Sbjct: 188 DPGCDVESVVHDAYENARFLCERYYLTAPGMKLEMHNSVNPGMPISIVAVPSHLYHIMFE 247
Query: 248 LFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTA 307
LFKNSMRATVE+H + LPPI+V VVRG ED+ +K+SD+GGG+ R++ D LF YMYSTA
Sbjct: 248 LFKNSMRATVENHGADEDLPPIKVMVVRGAEDLSIKISDRGGGVSRTILDRLFTYMYSTA 307
Query: 308 PQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANEL 367
P P + D PLAGYGYGLP+SRLYARYFHGD+ L+S +G GTDA+I+LKA+ EA+E+
Sbjct: 308 PPPPR-DGTQPPLAGYGYGLPLSRLYARYFHGDMYLVSMEGYGTDAMIFLKAIPVEASEV 366
Query: 368 LPIFNKTSSKFYRATIPTGDWS 389
LPI++ +S + + DWS
Sbjct: 367 LPIYSTSSRRQLTMSPQAADWS 388
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 414 PSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIF 473
P D PLAGYGYGLP+SRLYARYFHGD+ L+S +G GTDA+I+LKA+ EA+E+LPI+
Sbjct: 311 PRDGTQPPLAGYGYGLPLSRLYARYFHGDMYLVSMEGYGTDAMIFLKAIPVEASEVLPIY 370
Query: 474 NKTSSK 479
+ +S +
Sbjct: 371 STSSRR 376
>sp|Q02332|PDHK2_CAEEL Probable [pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial
OS=Caenorhabditis elegans GN=pdhk-2 PE=3 SV=1
Length = 401
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/393 (54%), Positives = 289/393 (73%), Gaps = 9/393 (2%)
Query: 1 MRFTLRR----CASVSKMLDFYSQFNPSPLSIKQFIDFGLSASEEKSFMFLRKELPVRLA 56
MRF+ + S++K LD+YSQF PS L+I+Q++DFG + S+ FL+ EL VRLA
Sbjct: 1 MRFSRKLLGPFVGSLAKKLDYYSQFQPSSLTIQQYLDFGRIGTSANSYTFLKNELLVRLA 60
Query: 57 NIMKEIHLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNR 116
NIM+E LLP LL+MPS +V+ WYA SF+++L FE +DS S + + +F L + R
Sbjct: 61 NIMQEFTLLPPKLLQMPSSKMVSNWYAESFEDLLLFEASDS-SPEQVARFNDQLTVVLKR 119
Query: 117 HSDVVQTMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTR 176
H+ VV+TMA+G++EL++S VD +E IQYFLDRFY++RISIRML NQH ++FG+ L
Sbjct: 120 HAHVVETMAEGLIELRESDGVDIASEKGIQYFLDRFYINRISIRMLQNQHLVVFGNVLPE 179
Query: 177 GDSSLRHIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIY 236
S RH+GCIDP CD+ VV DA+ENARFLC++YYL+SP +K+ HN EKG+P+ I+
Sbjct: 180 ---SPRHVGCIDPACDVESVVYDAFENARFLCDRYYLTSPSMKLEMHNAVEKGKPISIVA 236
Query: 237 VPSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVT 296
VPSHLYHM+FELFKN+MRATVE+H D LP I+V VV+G+ED+ +K+ D+GGG+ R++
Sbjct: 237 VPSHLYHMMFELFKNAMRATVEYHGVDDDLPDIKVYVVKGQEDLSIKICDRGGGVSRTIL 296
Query: 297 DMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIY 356
+ L++YMYSTAP P + D PLAGYGYGLP+SRLYARYF GD+ L+S +G GTDA IY
Sbjct: 297 ERLYNYMYSTAPPPPR-DGTQAPLAGYGYGLPLSRLYARYFLGDLFLVSMEGHGTDACIY 355
Query: 357 LKALSNEANELLPIFNKTSSKFYRATIPTGDWS 389
LKA+ EA+E+LPI++ +S + DWS
Sbjct: 356 LKAVPVEASEVLPIYSTSSRRNLTMGPQVADWS 388
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 414 PSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLPIF 473
P D PLAGYGYGLP+SRLYARYF GD+ L+S +G GTDA IYLKA+ EA+E+LPI+
Sbjct: 311 PRDGTQAPLAGYGYGLPLSRLYARYFLGDLFLVSMEGHGTDACIYLKAVPVEASEVLPIY 370
Query: 474 NKTSSK 479
+ +S +
Sbjct: 371 STSSRR 376
>sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase,
mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1
Length = 366
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 207/355 (58%), Gaps = 28/355 (7%)
Query: 26 LSIKQFIDFGLSASEEK---SFMFLRKELPVRLANIMKEIHLLPDNLLRMPSVGLVNEWY 82
+S++ ++FG +E S FL KELP+R+A E+ LP L P+V V +WY
Sbjct: 29 VSLRYMMEFGSKPTERNLLISAQFLHKELPIRVARRAIELQTLPYGLSDKPAVLKVRDWY 88
Query: 83 AMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQGVMELKDSHDVDHQTE 142
SF ++ F + +S D D F + + ++ RH++VV MA GV +LK + + E
Sbjct: 89 LESFRDMRAFPEI-KDSGDEKD-FTQMIKAVKVRHNNVVPMMALGVNQLKKGMNSGNLDE 146
Query: 143 NSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIGCIDPQCDLIGVVKDAYE 202
I FLDRFY+SRI IRMLI QH EL + L +G I + + V ++A E
Sbjct: 147 --IHQFLDRFYLSRIGIRMLIGQHV-----ELHNPNPPLHTVGYIHTKMSPMEVARNASE 199
Query: 203 NARFLCEQYYLSSPELKVTEHNEYEKGEP-VRIIYVPSHLYHMLFELFKNSMRATVEHHT 261
+AR +C + Y S+PE+ + G+P YVP+HL+ M++EL KNS+RA E
Sbjct: 200 DARSICFREYGSAPEINIY-------GDPSFTFPYVPTHLHLMMYELVKNSLRAVQERFV 252
Query: 262 DTD-VLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAH---- 316
D+D V PPI + V G ED+ +K+SD+GGGI RS +F Y+YSTA P + D
Sbjct: 253 DSDRVAPPIRIIVADGIEDVTIKVSDEGGGIARSGLPRIFTYLYSTARNPLEEDVDLGIA 312
Query: 317 --TVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLP 369
V +AGYGYGLPISRLYARYF GD+ ++S +G GTDA ++L L + + E LP
Sbjct: 313 DVPVTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGD-SQEPLP 366
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 420 VPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANELLP 471
V +AGYGYGLPISRLYARYF GD+ ++S +G GTDA ++L L + + E LP
Sbjct: 316 VTMAGYGYGLPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGD-SQEPLP 366
>sp|Q9P6P9|PDK_SCHPO [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC644.11c PE=3 SV=1
Length = 425
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 214/432 (49%), Gaps = 88/432 (20%)
Query: 10 SVSKMLDFYSQFNPSPLSIKQFIDFGLSASEEKSF---MFLRKELPVRLANIMKEIHLLP 66
++ + ++ +Q+ + LS+KQ + FG + + F +FLR ELP+RLA ++++ L
Sbjct: 7 TLQEKVNLLAQYPQTGLSLKQLVYFGKNPTPGTLFRAGLFLRDELPIRLARRIQDLQNLS 66
Query: 67 DNLLRMPSVGLVN--------------------------------EWYAMSFD-EILE-- 91
L M + V +W + D EIL
Sbjct: 67 PMLRSMKRISSVKAAYGRSMEEIIELKGVELPKCLPKHARYHNAPKWRSSLMDSEILHNP 126
Query: 92 --------------FEKADSNSTDTLD------------KFCKALVKIRNRHSDVVQTMA 125
FE S+ + +D F L IR RH +V +A
Sbjct: 127 SLANTHLDSSKGRYFETDFSDQDNGVDCNWPESLLKFNSNFAYLLNTIRTRHDNVAVEIA 186
Query: 126 QGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIG 185
+ E + + Q +NSIQ FLDRFYMSRI IRML+ Q+ L + ++G
Sbjct: 187 LDIQEYRRKTN---QIDNSIQIFLDRFYMSRIGIRMLLGQYIALVSEPPREN-----YVG 238
Query: 186 CIDPQCDLIGVVKDAYENARFLCEQYY--LSSPELKVTEHNEYEKGEPVRIIYVPSHLYH 243
I + ++ +++ A ENA+++C Y +PE+++ E ++YV SHL H
Sbjct: 239 VISTRANIYQIIEGAAENAKYICRLAYGLFEAPEIQIICDPSLE------MMYVESHLNH 292
Query: 244 MLFELFKNSMRATVEHH-TDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTDMLFHY 302
+FE+ KNS+RATVE H D+D PPI+V V +G+EDI +K+SD+GGGI R +++ Y
Sbjct: 293 AVFEILKNSLRATVEFHGVDSDFFPPIKVIVAKGQEDITIKISDEGGGISRRNIPLVWSY 352
Query: 303 MYSTAPQPSKSDAH-------TVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAII 355
M++TA D H T P+AG+G+GLP++RLY RYF GD+ L+S +G GTD I
Sbjct: 353 MFTTASPTLTDDPHDIVSANSTTPMAGFGFGLPLARLYTRYFGGDLELISMEGYGTDVYI 412
Query: 356 YLKALSNEANEL 367
+L L A L
Sbjct: 413 HLNRLCESAEPL 424
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 402 TISQSKTSSKH-VPSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 460
T S + T H + S T P+AG+G+GLP++RLY RYF GD+ L+S +G GTD I+L
Sbjct: 356 TASPTLTDDPHDIVSANSTTPMAGFGFGLPLARLYTRYFGGDLELISMEGYGTDVYIHLN 415
Query: 461 ALSNEANEL 469
L A L
Sbjct: 416 RLCESAEPL 424
>sp|O14874|BCKD_HUMAN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase,
mitochondrial OS=Homo sapiens GN=BCKDK PE=1 SV=2
Length = 412
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 173/332 (52%), Gaps = 34/332 (10%)
Query: 42 KSFMFLRKELPVRLANIMKEIHLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTD 101
KS +L++ELPVR+A+ +K LP + P++ V+E Y +F ++ +F + +
Sbjct: 89 KSARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADE 148
Query: 102 TLDKFCKALVKIRNRHSDVVQTMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRM 161
++C+ + ++ + H DVV +A+G+ E + H D E ++YFLD+ SR+ IRM
Sbjct: 149 A--QYCQLVRQLLDDHKDVVTLLAEGLRESR-KHIED---EKLVRYFLDKTLTSRLGIRM 202
Query: 162 LINQHTLLFGDELTRGDSSLRHIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVT 221
L H L D+ +G I + +++ + AR LCE Y ++P +++
Sbjct: 203 LATHHLALHEDKPD-------FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRIN 255
Query: 222 EHNEYEKGEPVRIIYVPSHLYHMLFELFKNSMRATVEHHTDTDV-LPPIEVSVVRGKEDI 280
H R ++P L ++L EL KN+MRAT+E H DT +P + +++ D+
Sbjct: 256 GHVA------ARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDL 309
Query: 281 CVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSK--------------SDAHTVPLAGYGYG 326
+++SD+GGGI D + Y ++TA ++ S A + P+ G+G+G
Sbjct: 310 IIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFG 369
Query: 327 LPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 358
LP SR YA Y G + L S G+GTD + L+
Sbjct: 370 LPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLR 401
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 415 SDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 460
S A + P+ G+G+GLP SR YA Y G + L S G+GTD + L+
Sbjct: 356 SGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLR 401
>sp|O55028|BCKD_MOUSE [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase,
mitochondrial OS=Mus musculus GN=Bckdk PE=1 SV=1
Length = 412
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 171/332 (51%), Gaps = 34/332 (10%)
Query: 42 KSFMFLRKELPVRLANIMKEIHLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTD 101
KS +L++ELPVR+A+ +K LP + P++ V+E Y +F ++ +F + +
Sbjct: 89 KSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADE 148
Query: 102 TLDKFCKALVKIRNRHSDVVQTMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRM 161
++C+ + ++ + H DVV +A+G+ E + Q E ++YFLD+ SR+ IRM
Sbjct: 149 A--QYCQLVRQLLDDHKDVVTLLAEGLRESRKHI----QDEKLVRYFLDKTLTSRLGIRM 202
Query: 162 LINQHTLLFGDELTRGDSSLRHIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVT 221
L H L D+ +G I + +++ + AR LCE Y ++P +++
Sbjct: 203 LATHHLALHEDKPD-------FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRIN 255
Query: 222 EHNEYEKGEPVRIIYVPSHLYHMLFELFKNSMRATVEHHTDTDV-LPPIEVSVVRGKEDI 280
H R ++P L ++L EL KN+MRAT+E H DT +P + +++ D+
Sbjct: 256 GHVA------ARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDL 309
Query: 281 CVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSK--------------SDAHTVPLAGYGYG 326
+++SD+GGGI D + Y ++TA ++ S + P+ G+G+G
Sbjct: 310 IIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFG 369
Query: 327 LPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 358
LP SR YA Y G + L S G+GTD + L+
Sbjct: 370 LPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLR 401
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 415 SDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 460
S + P+ G+G+GLP SR YA Y G + L S G+GTD + L+
Sbjct: 356 SGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLR 401
>sp|Q00972|BCKD_RAT [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase,
mitochondrial OS=Rattus norvegicus GN=Bckdk PE=1 SV=2
Length = 412
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 172/332 (51%), Gaps = 34/332 (10%)
Query: 42 KSFMFLRKELPVRLANIMKEIHLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTD 101
KS +L++ELPVR+A+ +K LP + P++ V+E Y +F ++ +F + +
Sbjct: 89 KSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADE 148
Query: 102 TLDKFCKALVKIRNRHSDVVQTMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRM 161
++C+ + ++ + H DVV +A+G+ E + H D E ++YFLD+ SR+ IRM
Sbjct: 149 A--QYCQLVRQLLDDHKDVVTLLAEGLRESR-KHIED---EKLVRYFLDKTLTSRLGIRM 202
Query: 162 LINQHTLLFGDELTRGDSSLRHIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVT 221
L H L D+ +G I + +++ + AR LCE Y ++P +++
Sbjct: 203 LATHHLALHEDKPD-------FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRIN 255
Query: 222 EHNEYEKGEPVRIIYVPSHLYHMLFELFKNSMRATVEHHTDTDV-LPPIEVSVVRGKEDI 280
H R ++P L ++L EL KN+MRAT+E H DT +P + +++ D+
Sbjct: 256 GHVA------ARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDL 309
Query: 281 CVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSK--------------SDAHTVPLAGYGYG 326
+++SD+GGGI D + Y ++TA ++ S + P+ G+G+G
Sbjct: 310 IIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFG 369
Query: 327 LPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 358
LP SR YA Y G + L S G+GTD + L+
Sbjct: 370 LPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLR 401
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 415 SDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 460
S + P+ G+G+GLP SR YA Y G + L S G+GTD + L+
Sbjct: 356 SGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLR 401
>sp|Q2KJG8|BCKD_BOVIN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase,
mitochondrial OS=Bos taurus GN=BCKDK PE=2 SV=1
Length = 412
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 171/332 (51%), Gaps = 34/332 (10%)
Query: 42 KSFMFLRKELPVRLANIMKEIHLLPDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTD 101
KS +L++ELPVR+A+ +K LP + P++ V+E Y +F ++ +F + +
Sbjct: 89 KSARYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADE 148
Query: 102 TLDKFCKALVKIRNRHSDVVQTMAQGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRM 161
++C+ + ++ + H DVV +A+G+ E + + E ++YFLD+ SR+ IRM
Sbjct: 149 A--RYCQLVRQLLDDHKDVVTLLAEGLRESRKYI----EDEKLVRYFLDKTLTSRLGIRM 202
Query: 162 LINQHTLLFGDELTRGDSSLRHIGCIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVT 221
L H L D+ +G I + +++ + AR LCE Y ++P +++
Sbjct: 203 LATHHLALHEDKPD-------FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRIN 255
Query: 222 EHNEYEKGEPVRIIYVPSHLYHMLFELFKNSMRATVEHHTDTDV-LPPIEVSVVRGKEDI 280
H R ++P L ++L EL KN+MRAT+E H DT +P + +++ D+
Sbjct: 256 GHVA------ARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDL 309
Query: 281 CVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSK--------------SDAHTVPLAGYGYG 326
+++SD+GGGI D + Y ++TA ++ S + P+ G+G+G
Sbjct: 310 VIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDLHSGGQSGPMHGFGFG 369
Query: 327 LPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 358
LP SR YA Y G + L S G+GTD + L+
Sbjct: 370 LPTSRAYAEYLGGSLRLQSLQGIGTDVYLRLR 401
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 415 SDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLK 460
S + P+ G+G+GLP SR YA Y G + L S G+GTD + L+
Sbjct: 356 SGGQSGPMHGFGFGLPTSRAYAEYLGGSLRLQSLQGIGTDVYLRLR 401
>sp|P40530|PDK_YEAST [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PKP1 PE=1 SV=1
Length = 394
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 170/371 (45%), Gaps = 35/371 (9%)
Query: 9 ASVSKMLDFYSQFNPSPLSIKQFIDFGLSASEEKSFMFLRKELPVRLANIMKE---IHLL 65
+++ ++ Y+ +PL+ + F+ + ++++ +M K + + L+ K I L
Sbjct: 39 SNIELLIQDYASKPIAPLNYEYFLQYRPPLTKKEEYMLTIKTINLLLSLTCKRLNAIQRL 98
Query: 66 PDNLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMA 125
P N + P + N Y S +L A K ++ + H D + +A
Sbjct: 99 PYNAVINPHIERTNSLYLKSLQTLLSI--AYPYELHNPPKIQAKFTELLDDHEDAIVVLA 156
Query: 126 QGVMELKDSHDVDHQTENSIQYFLDRFYMSRISIRMLINQHTLLFGDELTRGDSSLRHIG 185
+G+ E++ + + I FL+ RI++++L+ + L +GD++ R IG
Sbjct: 157 KGLQEIQSCY-----PKFQISQFLNFHLKERITMKLLVTHYLSLMAQ--NKGDTNKRMIG 209
Query: 186 CIDPQCDLIGVVKDAYENARFLCEQYYLSSPELKVTEHNEYEKGEPVRIIYVPSHLYHML 245
+ + ++K + +C + ++ V H + + +P L +++
Sbjct: 210 ILHRDLPIAQLIKHVSDYVNDICFVKF-NTQRTPVLIH---PPSQDITFTCIPPILEYIM 265
Query: 246 FELFKNSMRATV----EHHTDTDVLPPIEVSVVRGKED-ICVKMSDKGGGIPRSVTDMLF 300
E+FKN+ A + EH PIE+++++ +D + +++ D GGGI V ++F
Sbjct: 266 TEVFKNAFEAQIALGKEHM-------PIEINLLKPDDDELYLRIRDHGGGITPEVEALMF 318
Query: 301 HYMYSTAPQPSK-SDAHTVP------LAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDA 353
+Y YST Q S S++ +P ++G G+GLP+ + Y F G I + S G GTD
Sbjct: 319 NYSYSTHTQQSADSESTDLPGEQINNVSGMGFGLPMCKTYLELFGGKIDVQSLLGWGTDV 378
Query: 354 IIYLKALSNEA 364
I LK S A
Sbjct: 379 YIKLKGPSKTA 389
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 422 LAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEA 466
++G G+GLP+ + Y F G I + S G GTD I LK S A
Sbjct: 345 VSGMGFGLPMCKTYLELFGGKIDVQSLLGWGTDVYIKLKGPSKTA 389
>sp|P53170|PKP2_YEAST Pyruvate dehydrogenase kinase 2, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PKP2 PE=1
SV=3
Length = 491
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 200/476 (42%), Gaps = 77/476 (16%)
Query: 14 MLDFYSQFNPSPLSIKQFIDFGLSASEE------KSFMFLRKELPVRLANIMKEIHLLPD 67
+++ Y + +P+P+S+ Q + +++ S F+++EL +R+A+ + ++ LP
Sbjct: 68 LVENYLKRSPNPVSLTQLAQYYDDSTKLTRTKIINSGKFVKEELVIRIAHKLNQLQQLPF 127
Query: 68 NLLRMPSVGLVNEWYAMSFDEILEFEKADSNSTDTLDKFCKALVKIRNRHSDVVQTMAQG 127
N++ V E Y F+ ++ + TL+ ++ +D ++ M +G
Sbjct: 128 NVVNNFHFVQVYESYYNIFESFRKYP-----TIRTLED--------ASQFADFIKNMLEG 174
Query: 128 VMELKDSHDVDHQTENSI---------QYFLDRFYMSRISIRMLINQHTLLFGDELTRGD 178
L H + E +I L +RIS R+++ +H + + + +
Sbjct: 175 FNTLNLPHLIMGALECTILDLYPREKMDQLLSDLLRARISRRLIVEEHVSITANYTSGKE 234
Query: 179 SSLRHIGCIDPQCDLIGVVKDAYENA-RFLCEQYY--LSSPELKVTEHNEYEKGEPVRII 235
+ +G I +C + +A E + +F+ + Y+ + PE + E +
Sbjct: 235 ENTLVLGDIFQECSAKKYLLEASEESQKFIQDMYFKDIPMPEFII------EGDTQLSFY 288
Query: 236 YVPSHLYHMLFELFKNSMRATVEHHTDTDVLP--PIEVSVVRGKEDICVKMSDKGGGIPR 293
++P+HL ++L E+ +N+ AT++H+ + PI V+VV E ++SDK GG+
Sbjct: 289 FLPTHLKYLLGEILRNTYEATMKHYIRKGLEKPEPIIVTVVSNDESYLFRISDKAGGVLH 348
Query: 294 SVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDA 353
++ Q S ++ H +P GL +Y D + +
Sbjct: 349 DDENLWSFGKSKERAQESLNNFHKLP------GLQTVSIY-------------DEVHSHT 389
Query: 354 IIYLKALSNEANELLPIFNKTSSKFYRATIPTGDWSSTQSACMEHRHPTISQSKTSSKHV 413
K S ++ L P + ++ + S + +++ P I K S ++
Sbjct: 390 KYNSKLKSLQSITLKP--------YMHTSLEPMSYPSIINGHIKYETPLIELLKRSFRY- 440
Query: 414 PSDAHTVPLAGYGYGLPISRLYARYFHGDIMLLSCDGLGTDAIIYLKALSNEANEL 469
G GL + ++YA Y++GD+ L S G GTD ++ L L +L
Sbjct: 441 ----------KLGIGLAMCKVYAEYWNGDLSLHSMPGYGTDVVLKLGNLMKHTKKL 486
>sp|Q54U87|DHKA_DICDI Hybrid signal transduction histidine kinase A OS=Dictyostelium
discoideum GN=dhkA PE=1 SV=1
Length = 2150
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 233 RIIYVPS-HLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDI---CVKMSDKG 288
RII+ + + +L L N+++ T H TD+ + +E+I C+ + D G
Sbjct: 1493 RIIFGDAMRMRQVLLNLLSNAIKFTSRGHVLTDISVDDSIPPTNTEEEIIHLCITIEDTG 1552
Query: 289 GGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPIS-RLYARYFHGDIMLLSCD 347
GIP+S+ D +F P ++ T G G GL I+ RL G I + S
Sbjct: 1553 IGIPQSLFDSIFE------PFSQADNSTTRKYGGTGLGLSITKRLIEEVMGGTIQVSSIV 1606
Query: 348 GLGT 351
G G+
Sbjct: 1607 GQGS 1610
>sp|P0AEC4|ARCB_SHIFL Aerobic respiration control sensor protein ArcB OS=Shigella
flexneri GN=arcB PE=3 SV=1
Length = 778
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 231 PVRIIYVPSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDIC-VKMSDKGG 289
P ++I + L +L+ L N+++ T + + V V + D+ ++ D G
Sbjct: 389 PHQVITDGTRLRQILWNLISNAVKFTQQGQ--------VTVRVRYDEGDMLHFEVEDSGI 440
Query: 290 GIPRSVTDMLFHYMYSTAPQPSKSDAHT-VPLAGYGYGLPISRLYARYFHGDIMLLSCDG 348
GIP+ D +F Y D+H P G G GL +SR A+ GDI + S G
Sbjct: 441 GIPQDELDKIFAMYYQV------KDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQG 494
Query: 349 LGT 351
G+
Sbjct: 495 KGS 497
>sp|P0AEC3|ARCB_ECOLI Aerobic respiration control sensor protein ArcB OS=Escherichia coli
(strain K12) GN=arcB PE=1 SV=1
Length = 778
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 231 PVRIIYVPSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDIC-VKMSDKGG 289
P ++I + L +L+ L N+++ T + + V V + D+ ++ D G
Sbjct: 389 PHQVITDGTRLRQILWNLISNAVKFTQQGQ--------VTVRVRYDEGDMLHFEVEDSGI 440
Query: 290 GIPRSVTDMLFHYMYSTAPQPSKSDAHT-VPLAGYGYGLPISRLYARYFHGDIMLLSCDG 348
GIP+ D +F Y D+H P G G GL +SR A+ GDI + S G
Sbjct: 441 GIPQDELDKIFAMYYQV------KDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQG 494
Query: 349 LGT 351
G+
Sbjct: 495 KGS 497
>sp|P58363|ARCB_ECO57 Aerobic respiration control sensor protein ArcB OS=Escherichia coli
O157:H7 GN=arcB PE=3 SV=1
Length = 778
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 231 PVRIIYVPSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDIC-VKMSDKGG 289
P ++I + L +L+ L N+++ T + + V V + D+ ++ D G
Sbjct: 389 PHQVITDGTRLRQILWNLISNAVKFTQQGQ--------VTVRVRYDEGDMLHFEVEDSGI 440
Query: 290 GIPRSVTDMLFHYMYSTAPQPSKSDAHT-VPLAGYGYGLPISRLYARYFHGDIMLLSCDG 348
GIP+ D +F Y D+H P G G GL +SR A+ GDI + S G
Sbjct: 441 GIPQDELDKIFAMYYQV------KDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQG 494
Query: 349 LGT 351
G+
Sbjct: 495 KGS 497
>sp|Q45614|YYCG_BACSU Sensor histidine kinase YycG OS=Bacillus subtilis (strain 168)
GN=yycG PE=1 SV=1
Length = 611
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 217 ELKVTEHNEYEKGEPVRIIYVP---SHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSV 273
E+ +H E+ + P R +YV + +L + N+++ + E T + V
Sbjct: 466 EMTKEQHVEFIRNLPDRDLYVEIDQDKITQVLDNIISNALKYSPEGGHVT-----FSIDV 520
Query: 274 VRGKEDICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLY 333
+E + + + D+G GIP+ + +F Y A T L G G GL I++
Sbjct: 521 NEEEELLYISVKDEGIGIPKKDVEKVFDRFYRV------DKARTRKLGGTGLGLAIAKEM 574
Query: 334 ARYFHGDIMLLSCDGLGT 351
+ GDI S +G GT
Sbjct: 575 VQAHGGDIWADSIEGKGT 592
>sp|Q4LAJ8|WALK_STAHJ Sensor protein kinase WalK OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 524 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 577
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 578 RIWANSVEGQGTSIFITL 595
>sp|Q9RDT3|WALK_STAAU Sensor protein kinase WalK (Fragment) OS=Staphylococcus aureus
GN=walK PE=1 SV=1
Length = 415
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 332 MTIRIKDNGIGIPINKVDKIFDRFYRV------DKARTRKMGGTGLGLAISKEIVEAHNG 385
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 386 RIWANSVEGQGTSIFITL 403
>sp|A6QD58|WALK_STAAE Sensor protein kinase WalK OS=Staphylococcus aureus (strain Newman)
GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q6GKS6|WALK_STAAR Sensor protein kinase WalK OS=Staphylococcus aureus (strain
MRSA252) GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q7A215|WALK_STAAW Sensor protein kinase WalK OS=Staphylococcus aureus (strain MW2)
GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|A8YYU2|WALK_STAAT Sensor protein kinase WalK OS=Staphylococcus aureus (strain USA300
/ TCH1516) GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q6GD71|WALK_STAAS Sensor protein kinase WalK OS=Staphylococcus aureus (strain
MSSA476) GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q7A8E0|WALK_STAAN Sensor protein kinase WalK OS=Staphylococcus aureus (strain N315)
GN=walK PE=1 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q7A305|WALK_STAAM Sensor protein kinase WalK OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q5HJX6|WALK_STAAC Sensor protein kinase WalK OS=Staphylococcus aureus (strain COL)
GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q2YUQ2|WALK_STAAB Sensor protein kinase WalK OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|A5INR0|WALK_STAA9 Sensor protein kinase WalK OS=Staphylococcus aureus (strain JH9)
GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q2G2U4|WALK_STAA8 Sensor protein kinase WalK OS=Staphylococcus aureus (strain NCTC
8325) GN=walK PE=1 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q2FKN7|WALK_STAA3 Sensor protein kinase WalK OS=Staphylococcus aureus (strain USA300)
GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|A6TXG9|WALK_STAA2 Sensor protein kinase WalK OS=Staphylococcus aureus (strain JH1)
GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|A7WWQ7|WALK_STAA1 Sensor protein kinase WalK OS=Staphylococcus aureus (strain Mu3 /
ATCC 700698) GN=walK PE=3 SV=1
Length = 608
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 525 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 578
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 579 RIWANSVEGQGTSIFITL 596
>sp|Q8CU87|WALK_STAES Sensor protein kinase WalK OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=walK PE=1 SV=1
Length = 610
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 527 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 580
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 581 RIWANSVEGQGTSIFITL 598
>sp|Q5HK19|WALK_STAEQ Sensor protein kinase WalK OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=walK PE=1 SV=1
Length = 610
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 527 MTIRIKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 580
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 581 RIWANSVEGQGTSIFITL 598
>sp|Q4A159|WALK_STAS1 Sensor protein kinase WalK OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=walK
PE=3 SV=1
Length = 610
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 280 ICVKMSDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHG 339
+ +++ D G GIP + D +F Y A T + G G GL IS+ +G
Sbjct: 526 MTIRVKDNGIGIPINKVDKIFDRFYRVDK------ARTRKMGGTGLGLAISKEIVEAHNG 579
Query: 340 DIMLLSCDGLGTDAIIYL 357
I S +G GT I L
Sbjct: 580 RIWANSVEGQGTSIFITL 597
>sp|Q04943|AFSQ2_STRCO Signal transduction histidine-protein kinase AfsQ2 OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=afsQ2
PE=3 SV=1
Length = 535
Score = 39.7 bits (91), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 238 PSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKMSDKGGGIPRSVTD 297
P L +L L N+++ H + P+ VSV R +I +++ D G GIP V
Sbjct: 403 PRRLDVILANLIGNALK-----HGGS----PVRVSVARADHEIVIRVRDNGPGIPEDVLP 453
Query: 298 MLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDI 341
+F Y + +S+ G G GL I+ A G+I
Sbjct: 454 HVFDRFYKASASRPRSE-------GSGLGLSIALENAHIHGGEI 490
>sp|Q9KM66|CQSS_VIBCH CAI-1 autoinducer sensor kinase/phosphatase CqsS OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=cqsS PE=1 SV=1
Length = 686
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 19/156 (12%)
Query: 225 EYEKGEPVRIIYVPSHLYHMLFELFKNSMRATVEHHTDTDVLPPIEVSVVRGKEDICVKM 284
E E +P + L + LF L KN+ EH + + +S+ + E +++
Sbjct: 298 ELEVHQPFDFFGSDTLLTYALFNLLKNAFYYQKEHFS-------VCISIEQTSEHNLIRV 350
Query: 285 SDKGGGIPRSVTDMLFHYMYSTAPQPSKSDAHTVPLAGYGYGLPISRLYARYFHGDIMLL 344
D G GI + + +F Y+ S YG GLP R F G I
Sbjct: 351 RDNGVGIAPEMLEDIFRDFYTFGKNGS-----------YGLGLPFCRKVMSAFGGTIRCA 399
Query: 345 SCDGLGTDAII-YLKALSNEANELLPIFNKTSSKFY 379
S G T+ ++ + + S+ NE+ KT S Y
Sbjct: 400 SQQGQWTEFVLSFPRYDSDTVNEIKTELLKTKSLIY 435
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,932,568
Number of Sequences: 539616
Number of extensions: 7659388
Number of successful extensions: 18297
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 18074
Number of HSP's gapped (non-prelim): 171
length of query: 482
length of database: 191,569,459
effective HSP length: 121
effective length of query: 361
effective length of database: 126,275,923
effective search space: 45585608203
effective search space used: 45585608203
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)