Query psy14549
Match_columns 117
No_of_seqs 100 out of 1100
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 22:42:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14549.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14549hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00326 Peptidase_S9: Prolyl 99.9 2.2E-22 4.7E-27 131.2 8.0 102 13-116 1-102 (213)
2 KOG2281|consensus 99.9 2.6E-22 5.7E-27 144.7 8.8 116 1-117 649-766 (867)
3 COG1506 DAP2 Dipeptidyl aminop 99.9 1E-21 2.2E-26 145.0 10.0 110 1-116 401-510 (620)
4 KOG2100|consensus 99.9 3E-21 6.5E-26 144.6 10.4 115 1-117 533-648 (755)
5 PRK10115 protease 2; Provision 99.8 6.8E-19 1.5E-23 131.3 10.2 111 1-116 452-562 (686)
6 PRK05077 frsA fermentation/res 99.6 5.9E-15 1.3E-19 104.9 9.6 87 19-114 215-301 (414)
7 PLN02298 hydrolase, alpha/beta 99.6 9.3E-15 2E-19 100.8 9.8 97 13-114 74-170 (330)
8 TIGR01840 esterase_phb esteras 99.6 1.6E-14 3.4E-19 94.3 8.7 107 1-113 20-130 (212)
9 TIGR03101 hydr2_PEP hydrolase, 99.5 5.9E-14 1.3E-18 94.6 8.9 87 19-114 49-135 (266)
10 PLN02385 hydrolase; alpha/beta 99.5 5.7E-14 1.2E-18 97.7 8.1 90 20-114 109-198 (349)
11 PHA02857 monoglyceride lipase; 99.5 2.7E-13 5.9E-18 91.2 8.8 90 18-114 44-133 (276)
12 PRK13604 luxD acyl transferase 99.5 2.4E-13 5.2E-18 92.8 7.6 88 17-115 55-143 (307)
13 PRK10566 esterase; Provisional 99.5 4.8E-13 1E-17 88.8 8.5 89 17-108 45-136 (249)
14 PF06500 DUF1100: Alpha/beta h 99.5 1E-13 2.2E-18 97.5 5.4 87 20-115 212-298 (411)
15 PRK10985 putative hydrolase; P 99.4 8.1E-13 1.8E-17 91.3 8.9 88 20-115 81-170 (324)
16 PF12697 Abhydrolase_6: Alpha/ 99.4 1.8E-12 3.9E-17 83.3 9.9 98 1-114 5-102 (228)
17 TIGR00976 /NonD putative hydro 99.4 5.7E-13 1.2E-17 97.8 8.3 88 20-115 47-134 (550)
18 COG2267 PldB Lysophospholipase 99.4 1.1E-12 2.3E-17 89.9 8.8 90 19-116 54-145 (298)
19 PF02129 Peptidase_S15: X-Pro 99.4 3.9E-13 8.4E-18 90.8 6.5 87 22-116 53-139 (272)
20 PRK10749 lysophospholipase L2; 99.4 1E-12 2.2E-17 90.9 8.1 89 21-113 76-166 (330)
21 PLN02511 hydrolase 99.4 1.5E-12 3.3E-17 92.0 8.9 86 22-115 125-212 (388)
22 KOG1455|consensus 99.4 6.2E-13 1.3E-17 89.7 6.4 98 13-115 69-166 (313)
23 PF10503 Esterase_phd: Esteras 99.4 2.6E-12 5.6E-17 84.4 8.7 90 19-112 39-131 (220)
24 PLN02965 Probable pheophorbida 99.4 3.9E-12 8.4E-17 84.9 9.2 96 1-112 10-106 (255)
25 TIGR01250 pro_imino_pep_2 prol 99.4 3.4E-12 7.3E-17 85.0 8.9 100 1-113 32-131 (288)
26 PRK00870 haloalkane dehalogena 99.4 4.3E-12 9.4E-17 86.6 9.4 83 20-112 67-149 (302)
27 PF12715 Abhydrolase_7: Abhydr 99.4 5.8E-13 1.3E-17 92.7 4.9 91 20-113 154-260 (390)
28 PF07859 Abhydrolase_3: alpha/ 99.4 8.5E-13 1.9E-17 85.7 5.1 102 1-115 5-112 (211)
29 COG1647 Esterase/lipase [Gener 99.4 3.2E-12 7E-17 82.9 7.7 87 17-114 33-119 (243)
30 TIGR03343 biphenyl_bphD 2-hydr 99.4 2.6E-12 5.6E-17 86.4 7.2 80 22-112 56-135 (282)
31 TIGR02821 fghA_ester_D S-formy 99.3 1.6E-11 3.6E-16 83.1 10.1 42 73-115 134-175 (275)
32 PRK05371 x-prolyl-dipeptidyl a 99.3 8.7E-12 1.9E-16 94.4 9.6 90 19-115 272-375 (767)
33 TIGR03695 menH_SHCHC 2-succiny 99.3 1.5E-11 3.3E-16 80.0 9.5 85 19-114 21-106 (251)
34 PLN02442 S-formylglutathione h 99.3 1E-11 2.2E-16 84.5 8.9 52 63-115 129-180 (283)
35 PRK03592 haloalkane dehalogena 99.3 6.1E-12 1.3E-16 85.5 7.6 94 1-112 34-127 (295)
36 TIGR03100 hydr1_PEP hydrolase, 99.3 1.5E-11 3.3E-16 83.2 9.2 85 19-113 50-134 (274)
37 PF12695 Abhydrolase_5: Alpha/ 99.3 2.1E-11 4.5E-16 74.5 9.0 78 17-112 17-94 (145)
38 PLN02824 hydrolase, alpha/beta 99.3 1.7E-11 3.8E-16 83.2 9.0 102 1-113 36-137 (294)
39 PF00561 Abhydrolase_1: alpha/ 99.3 1.5E-11 3.3E-16 79.8 8.3 78 27-112 1-78 (230)
40 PRK10162 acetyl esterase; Prov 99.3 1.6E-11 3.5E-16 84.8 8.6 103 1-115 88-197 (318)
41 TIGR01249 pro_imino_pep_1 prol 99.3 1.6E-11 3.5E-16 84.1 7.9 81 22-112 49-129 (306)
42 TIGR03611 RutD pyrimidine util 99.3 1.3E-11 2.9E-16 81.1 6.6 80 24-114 37-116 (257)
43 COG0412 Dienelactone hydrolase 99.3 2.3E-11 5E-16 80.9 7.6 107 4-113 28-146 (236)
44 TIGR01836 PHA_synth_III_C poly 99.3 4.4E-11 9.5E-16 83.4 9.3 88 18-115 86-173 (350)
45 PRK06489 hypothetical protein; 99.3 3.5E-11 7.6E-16 84.2 8.8 84 24-112 103-188 (360)
46 TIGR02240 PHA_depoly_arom poly 99.3 1.4E-11 3.1E-16 83.0 6.1 78 24-113 49-126 (276)
47 COG2945 Predicted hydrolase of 99.2 2.7E-11 5.9E-16 77.1 6.5 86 19-114 53-138 (210)
48 PRK03204 haloalkane dehalogena 99.2 6.2E-11 1.3E-15 80.6 8.5 78 24-112 58-135 (286)
49 TIGR02427 protocat_pcaD 3-oxoa 99.2 2.7E-11 5.9E-16 79.0 5.9 77 24-112 37-113 (251)
50 KOG4178|consensus 99.2 1E-10 2.2E-15 79.9 8.7 85 20-114 65-149 (322)
51 PLN02578 hydrolase 99.2 4.2E-11 9.2E-16 83.6 7.0 78 24-113 110-187 (354)
52 COG1505 Serine proteases of th 99.2 5.1E-12 1.1E-16 91.6 2.4 110 1-115 428-537 (648)
53 PLN02652 hydrolase; alpha/beta 99.2 7.1E-11 1.5E-15 83.8 7.7 88 19-114 156-246 (395)
54 cd00312 Esterase_lipase Estera 99.2 3.2E-11 6.9E-16 87.4 6.1 108 1-114 102-214 (493)
55 PRK10673 acyl-CoA esterase; Pr 99.2 1.9E-10 4.1E-15 76.3 8.9 74 24-110 40-113 (255)
56 PLN02211 methyl indole-3-aceta 99.2 2.3E-10 4.9E-15 77.5 9.3 83 19-112 38-121 (273)
57 PLN00021 chlorophyllase 99.2 2.7E-10 6E-15 78.5 9.8 84 18-113 71-166 (313)
58 TIGR03056 bchO_mg_che_rel puta 99.2 1.7E-10 3.8E-15 77.0 8.5 79 24-113 52-130 (278)
59 PLN03087 BODYGUARD 1 domain co 99.2 1.3E-10 2.8E-15 84.1 8.1 79 24-113 230-309 (481)
60 PRK10349 carboxylesterase BioH 99.2 1.8E-10 4E-15 76.7 8.2 71 24-111 37-107 (256)
61 TIGR01738 bioH putative pimelo 99.2 1.7E-10 3.6E-15 75.1 7.8 76 20-113 25-100 (245)
62 PRK07581 hypothetical protein; 99.2 9.7E-11 2.1E-15 81.2 6.9 88 21-112 66-158 (339)
63 PF01738 DLH: Dienelactone hyd 99.2 8.3E-11 1.8E-15 77.0 6.2 90 19-111 34-130 (218)
64 PRK11126 2-succinyl-6-hydroxy- 99.2 3.2E-10 7E-15 74.7 9.0 76 25-113 26-102 (242)
65 KOG1552|consensus 99.2 1E-10 2.2E-15 77.5 6.4 79 25-115 87-165 (258)
66 TIGR01607 PST-A Plasmodium sub 99.2 9.1E-11 2E-15 81.5 6.2 93 19-113 67-185 (332)
67 cd00707 Pancreat_lipase_like P 99.1 5.2E-10 1.1E-14 75.9 9.6 88 19-112 59-146 (275)
68 PRK08775 homoserine O-acetyltr 99.1 2.2E-10 4.7E-15 79.7 7.9 76 24-113 97-173 (343)
69 COG0657 Aes Esterase/lipase [L 99.1 3.4E-10 7.4E-15 77.8 8.1 103 1-116 86-194 (312)
70 COG1770 PtrB Protease II [Amin 99.1 2.8E-10 6.1E-15 83.5 7.8 103 10-116 463-565 (682)
71 PLN02894 hydrolase, alpha/beta 99.1 3E-10 6.6E-15 80.7 7.8 79 25-112 130-210 (402)
72 PLN02679 hydrolase, alpha/beta 99.1 4.4E-10 9.6E-15 78.8 8.3 78 24-112 112-190 (360)
73 TIGR01392 homoserO_Ac_trn homo 99.1 4.1E-10 9E-15 78.6 8.0 88 22-113 68-162 (351)
74 PF00135 COesterase: Carboxyle 99.1 6.8E-11 1.5E-15 86.0 3.2 87 19-111 149-243 (535)
75 COG3509 LpqC Poly(3-hydroxybut 99.1 6.6E-10 1.4E-14 75.0 7.6 92 19-113 84-179 (312)
76 PRK14875 acetoin dehydrogenase 99.1 1.3E-09 2.9E-14 76.0 8.9 77 24-112 155-231 (371)
77 KOG2237|consensus 99.0 2.2E-10 4.8E-15 83.8 4.6 110 1-115 477-586 (712)
78 PF05448 AXE1: Acetyl xylan es 99.0 7.4E-10 1.6E-14 76.6 6.8 91 22-115 105-212 (320)
79 PLN03084 alpha/beta hydrolase 99.0 1.6E-09 3.4E-14 76.7 8.5 85 20-113 148-232 (383)
80 KOG4409|consensus 99.0 1.4E-09 2.9E-14 75.0 6.7 81 25-113 115-195 (365)
81 COG2936 Predicted acyl esteras 99.0 1E-09 2.2E-14 80.0 6.4 86 21-114 75-160 (563)
82 KOG4391|consensus 99.0 1.7E-10 3.8E-15 75.1 1.7 83 20-111 100-182 (300)
83 TIGR03230 lipo_lipase lipoprot 99.0 5.2E-09 1.1E-13 75.0 9.3 82 25-112 72-153 (442)
84 KOG1838|consensus 99.0 4E-09 8.6E-14 74.4 8.3 87 20-114 148-236 (409)
85 COG2272 PnbA Carboxylesterase 99.0 1.2E-09 2.7E-14 78.1 5.3 110 1-114 101-218 (491)
86 PLN02872 triacylglycerol lipas 99.0 2.3E-10 5E-15 81.1 1.6 89 19-113 100-197 (395)
87 PF12740 Chlorophyllase2: Chlo 98.9 9.9E-09 2.2E-13 68.8 8.1 85 18-113 36-131 (259)
88 PLN02980 2-oxoglutarate decarb 98.9 8.5E-09 1.8E-13 83.8 9.1 85 24-112 1395-1479(1655)
89 KOG1515|consensus 98.9 1.4E-08 3E-13 70.6 8.9 103 1-114 97-208 (336)
90 TIGR01838 PHA_synth_I poly(R)- 98.9 2.2E-08 4.8E-13 73.4 9.5 89 19-116 213-305 (532)
91 PRK00175 metX homoserine O-ace 98.9 2E-08 4.4E-13 70.9 8.5 86 24-113 89-182 (379)
92 KOG3101|consensus 98.8 5.3E-10 1.1E-14 72.5 0.2 43 73-116 137-179 (283)
93 KOG2564|consensus 98.8 6.7E-09 1.4E-13 69.9 5.3 73 19-98 95-167 (343)
94 COG3458 Acetyl esterase (deace 98.8 4.7E-09 1E-13 70.3 4.3 91 22-115 105-213 (321)
95 PF06342 DUF1057: Alpha/beta h 98.8 5.1E-08 1.1E-12 65.8 8.9 95 1-112 42-136 (297)
96 COG4757 Predicted alpha/beta h 98.8 5.3E-09 1.2E-13 68.7 4.1 80 15-98 46-125 (281)
97 COG4188 Predicted dienelactone 98.8 1.4E-08 3E-13 70.7 5.8 85 13-98 85-180 (365)
98 PF03583 LIP: Secretory lipase 98.8 5.7E-08 1.2E-12 66.5 8.0 96 13-115 14-115 (290)
99 PRK11071 esterase YqiA; Provis 98.7 9.6E-08 2.1E-12 61.6 8.4 64 25-114 31-94 (190)
100 COG0596 MhpC Predicted hydrola 98.7 2.4E-07 5.2E-12 59.9 9.1 73 27-113 51-123 (282)
101 PF05577 Peptidase_S28: Serine 98.7 1.4E-07 3.1E-12 67.7 8.4 95 19-114 52-149 (434)
102 PF08840 BAAT_C: BAAT / Acyl-C 98.7 8.9E-08 1.9E-12 62.8 6.8 53 57-112 3-55 (213)
103 PF03403 PAF-AH_p_II: Platelet 98.7 7.6E-08 1.7E-12 68.1 6.8 38 72-111 223-260 (379)
104 PRK05855 short chain dehydroge 98.7 8.5E-08 1.9E-12 70.4 7.0 69 20-97 46-114 (582)
105 COG0429 Predicted hydrolase of 98.7 1E-07 2.2E-12 65.6 6.7 86 21-114 99-186 (345)
106 PRK06765 homoserine O-acetyltr 98.7 1.1E-07 2.4E-12 67.6 7.2 88 21-112 94-195 (389)
107 PF08538 DUF1749: Protein of u 98.6 3.7E-07 8E-12 62.5 8.9 89 20-116 57-151 (303)
108 KOG3043|consensus 98.6 4.6E-08 1E-12 63.9 4.0 89 19-112 60-153 (242)
109 PF00756 Esterase: Putative es 98.6 6.1E-08 1.3E-12 64.5 4.6 52 62-115 101-152 (251)
110 KOG1553|consensus 98.6 9.1E-08 2E-12 66.4 5.4 83 23-115 265-347 (517)
111 KOG1516|consensus 98.6 4.4E-08 9.5E-13 72.0 3.8 90 19-112 137-231 (545)
112 COG4099 Predicted peptidase [G 98.6 2.1E-07 4.5E-12 63.4 6.6 52 61-114 253-305 (387)
113 KOG4667|consensus 98.6 1.8E-07 3.9E-12 61.1 5.9 93 14-116 50-142 (269)
114 PRK07868 acyl-CoA synthetase; 98.5 6.4E-07 1.4E-11 70.2 8.7 87 20-115 93-179 (994)
115 PRK11460 putative hydrolase; P 98.5 4.6E-07 1E-11 60.1 6.7 52 60-113 87-138 (232)
116 PF02230 Abhydrolase_2: Phosph 98.5 4.2E-07 9E-12 59.5 6.0 39 74-113 102-140 (216)
117 COG0627 Predicted esterase [Ge 98.5 2E-07 4.3E-12 64.4 4.4 39 77-116 152-190 (316)
118 TIGR01839 PHA_synth_II poly(R) 98.5 1.3E-06 2.8E-11 64.3 8.7 87 19-116 240-331 (560)
119 PLN02733 phosphatidylcholine-s 98.5 7.4E-07 1.6E-11 64.2 7.1 85 18-113 113-201 (440)
120 PRK10439 enterobactin/ferric e 98.4 2.3E-06 5E-11 61.3 8.5 52 61-113 271-323 (411)
121 PF10230 DUF2305: Uncharacteri 98.4 3E-06 6.4E-11 57.4 8.6 100 12-114 16-123 (266)
122 PF05677 DUF818: Chlamydia CHL 98.4 1.7E-06 3.6E-11 60.0 7.2 72 19-97 164-235 (365)
123 TIGR03502 lipase_Pla1_cef extr 98.4 1.1E-06 2.4E-11 67.0 5.9 79 19-98 469-576 (792)
124 KOG1454|consensus 98.3 2.9E-06 6.2E-11 59.1 7.1 73 25-107 85-157 (326)
125 COG0400 Predicted esterase [Ge 98.3 1.6E-06 3.4E-11 56.7 5.4 57 57-115 80-136 (207)
126 COG2021 MET2 Homoserine acetyl 98.3 1.7E-06 3.7E-11 60.4 5.6 87 22-112 88-181 (368)
127 PF07224 Chlorophyllase: Chlor 98.3 3E-06 6.5E-11 56.9 6.2 81 21-112 68-156 (307)
128 KOG2984|consensus 98.2 4.4E-07 9.5E-12 58.9 1.1 78 25-111 70-147 (277)
129 COG2819 Predicted hydrolase of 98.2 4.1E-06 8.8E-11 56.3 4.9 42 71-113 131-172 (264)
130 KOG2183|consensus 98.1 5.2E-06 1.1E-10 58.9 4.8 90 21-112 106-202 (492)
131 KOG3847|consensus 98.1 9.1E-06 2E-10 55.9 5.5 37 73-111 237-273 (399)
132 KOG4627|consensus 98.1 5E-06 1.1E-10 54.1 4.0 82 21-115 92-174 (270)
133 KOG2182|consensus 98.1 1.7E-05 3.8E-10 57.3 6.5 95 20-115 112-209 (514)
134 KOG4389|consensus 98.0 4.5E-06 9.6E-11 60.3 2.4 91 20-114 160-256 (601)
135 PF09752 DUF2048: Uncharacteri 97.9 9.6E-05 2.1E-09 51.7 8.0 85 22-111 117-208 (348)
136 PF11187 DUF2974: Protein of u 97.9 6.4E-05 1.4E-09 49.8 6.8 77 33-111 42-121 (224)
137 PF00151 Lipase: Lipase; Inte 97.8 4.8E-05 1E-09 53.1 5.0 94 12-111 88-185 (331)
138 PF06057 VirJ: Bacterial virul 97.8 7.7E-05 1.7E-09 48.0 5.1 80 19-111 22-105 (192)
139 PTZ00472 serine carboxypeptida 97.7 0.00017 3.7E-09 52.5 6.9 90 25-116 120-219 (462)
140 COG2382 Fes Enterochelin ester 97.7 7.3E-05 1.6E-09 51.1 4.5 54 62-116 161-215 (299)
141 KOG4840|consensus 97.7 4.2E-05 9.1E-10 50.5 3.1 88 19-116 59-147 (299)
142 KOG2624|consensus 97.7 6.1E-05 1.3E-09 53.8 4.0 92 18-113 98-199 (403)
143 PF07819 PGAP1: PGAP1-like pro 97.6 0.00068 1.5E-08 45.0 8.4 79 25-112 38-122 (225)
144 PF06821 Ser_hydrolase: Serine 97.6 0.0004 8.6E-09 44.2 6.9 53 59-113 38-91 (171)
145 COG3208 GrsT Predicted thioest 97.6 0.00018 3.8E-09 47.9 5.1 63 25-98 32-95 (244)
146 PF06028 DUF915: Alpha/beta hy 97.5 0.00074 1.6E-08 45.6 7.4 56 57-115 86-145 (255)
147 PF00975 Thioesterase: Thioest 97.5 0.00058 1.3E-08 44.7 6.8 80 18-110 19-101 (229)
148 cd00741 Lipase Lipase. Lipase 97.4 0.00079 1.7E-08 41.7 6.3 36 75-111 26-65 (153)
149 PF01674 Lipase_2: Lipase (cla 97.4 0.0014 3E-08 43.4 7.7 72 18-97 21-95 (219)
150 KOG2382|consensus 97.4 0.00062 1.3E-08 47.1 6.0 78 21-107 75-153 (315)
151 PF05728 UPF0227: Uncharacteri 97.4 0.00051 1.1E-08 44.3 5.1 36 75-114 57-92 (187)
152 PF12146 Hydrolase_4: Putative 97.3 0.00018 4E-09 40.0 2.5 25 18-42 35-59 (79)
153 PF11144 DUF2920: Protein of u 97.3 0.00082 1.8E-08 47.9 6.0 62 50-112 156-218 (403)
154 PF07519 Tannase: Tannase and 97.3 0.00076 1.6E-08 49.4 5.9 92 22-115 55-152 (474)
155 PF01764 Lipase_3: Lipase (cla 97.2 0.0016 3.4E-08 39.5 6.1 52 58-112 48-105 (140)
156 PF07082 DUF1350: Protein of u 97.2 0.0032 7E-08 42.2 7.4 86 2-98 24-111 (250)
157 COG3243 PhaC Poly(3-hydroxyalk 97.2 0.0016 3.4E-08 46.7 6.3 88 19-116 132-220 (445)
158 COG4947 Uncharacterized protei 97.2 0.00024 5.2E-09 45.2 2.0 52 61-116 88-139 (227)
159 PF10340 DUF2424: Protein of u 97.1 0.0061 1.3E-07 43.3 8.5 79 26-116 154-238 (374)
160 PF02273 Acyl_transf_2: Acyl t 97.1 0.0032 7E-08 42.4 6.5 92 14-116 45-137 (294)
161 COG3545 Predicted esterase of 97.0 0.0039 8.5E-08 39.7 6.4 52 59-112 42-93 (181)
162 PF02450 LCAT: Lecithin:choles 97.0 0.0022 4.8E-08 45.9 5.7 52 57-113 103-160 (389)
163 PF00450 Peptidase_S10: Serine 97.0 0.0034 7.3E-08 44.7 6.6 90 25-115 84-183 (415)
164 KOG2112|consensus 96.9 0.0062 1.3E-07 39.7 6.4 41 73-114 89-129 (206)
165 cd00519 Lipase_3 Lipase (class 96.8 0.0055 1.2E-07 40.4 5.7 36 76-111 127-166 (229)
166 COG3571 Predicted hydrolase of 96.7 0.013 2.8E-07 37.2 6.8 84 19-110 36-121 (213)
167 PRK10252 entF enterobactin syn 96.7 0.0092 2E-07 48.3 7.6 74 24-111 1092-1169(1296)
168 PF11339 DUF3141: Protein of u 96.7 0.016 3.6E-07 42.8 7.9 55 56-113 117-176 (581)
169 PF03959 FSH1: Serine hydrolas 96.6 0.0027 5.9E-08 41.6 3.5 56 57-113 83-145 (212)
170 PF03096 Ndr: Ndr family; Int 96.6 0.012 2.7E-07 40.3 6.6 82 24-114 53-135 (283)
171 PF05990 DUF900: Alpha/beta hy 96.6 0.017 3.7E-07 38.5 7.1 82 28-115 50-139 (233)
172 PLN02454 triacylglycerol lipas 96.5 0.0073 1.6E-07 43.5 5.3 38 59-97 211-248 (414)
173 TIGR01849 PHB_depoly_PhaZ poly 96.5 0.019 4.2E-07 41.4 7.3 82 22-116 126-211 (406)
174 PF11288 DUF3089: Protein of u 96.4 0.011 2.4E-07 38.8 5.2 72 24-98 43-116 (207)
175 KOG3975|consensus 96.3 0.057 1.2E-06 36.6 8.3 50 60-112 95-146 (301)
176 PLN02408 phospholipase A1 96.2 0.014 3E-07 41.4 5.1 35 62-97 186-220 (365)
177 PLN02571 triacylglycerol lipas 96.1 0.015 3.2E-07 41.9 5.1 37 60-97 210-246 (413)
178 COG4814 Uncharacterized protei 96.1 0.018 3.8E-07 39.0 5.0 55 57-114 119-177 (288)
179 PRK04940 hypothetical protein; 96.1 0.0088 1.9E-07 38.4 3.4 33 77-113 60-92 (180)
180 PLN02213 sinapoylglucose-malat 96.0 0.027 6E-07 39.2 6.0 87 28-116 3-99 (319)
181 KOG3724|consensus 96.0 0.013 2.8E-07 45.3 4.4 38 60-97 159-202 (973)
182 PLN02324 triacylglycerol lipas 96.0 0.02 4.4E-07 41.3 5.2 36 60-96 199-234 (415)
183 PF01083 Cutinase: Cutinase; 95.9 0.032 6.9E-07 35.7 5.3 78 25-111 38-120 (179)
184 PLN02310 triacylglycerol lipas 95.8 0.053 1.2E-06 39.1 6.8 21 77-97 209-229 (405)
185 KOG2931|consensus 95.7 0.12 2.6E-06 35.8 7.8 80 26-113 78-157 (326)
186 smart00824 PKS_TE Thioesterase 95.7 0.13 2.8E-06 32.5 7.9 73 24-109 23-98 (212)
187 PF06259 Abhydrolase_8: Alpha/ 95.7 0.1 2.2E-06 33.5 7.1 51 57-110 91-141 (177)
188 PLN02802 triacylglycerol lipas 95.6 0.033 7.1E-07 41.1 5.1 21 77-97 330-350 (509)
189 COG4782 Uncharacterized protei 95.5 0.062 1.3E-06 38.1 5.9 55 57-114 174-235 (377)
190 PLN02719 triacylglycerol lipas 95.5 0.04 8.6E-07 40.8 5.2 37 60-96 279-317 (518)
191 PLN00413 triacylglycerol lipas 95.5 0.041 8.9E-07 40.3 5.2 34 60-96 270-303 (479)
192 PLN02162 triacylglycerol lipas 95.5 0.079 1.7E-06 38.9 6.6 21 76-96 277-297 (475)
193 PLN02761 lipase class 3 family 95.4 0.043 9.4E-07 40.6 5.1 38 59-96 273-313 (527)
194 PLN02209 serine carboxypeptida 95.4 0.035 7.6E-07 40.5 4.6 89 25-115 116-214 (437)
195 KOG3967|consensus 95.3 0.15 3.2E-06 34.0 6.9 86 21-112 139-227 (297)
196 PLN02934 triacylglycerol lipas 95.3 0.043 9.4E-07 40.5 5.0 34 60-96 307-340 (515)
197 PLN03016 sinapoylglucose-malat 95.3 0.039 8.5E-07 40.2 4.7 89 25-115 114-212 (433)
198 COG3319 Thioesterase domains o 95.2 0.085 1.9E-06 35.8 5.7 60 25-97 25-85 (257)
199 KOG4569|consensus 95.2 0.054 1.2E-06 38.1 5.0 37 58-97 155-191 (336)
200 COG1075 LipA Predicted acetylt 95.1 0.076 1.6E-06 37.4 5.5 37 75-112 125-163 (336)
201 PLN02753 triacylglycerol lipas 94.9 0.075 1.6E-06 39.5 5.2 21 76-96 311-331 (531)
202 COG2939 Carboxypeptidase C (ca 94.7 0.035 7.7E-07 40.8 3.2 70 26-97 146-218 (498)
203 PLN03037 lipase class 3 family 94.6 0.093 2E-06 39.0 5.1 21 77-97 318-338 (525)
204 PF05057 DUF676: Putative seri 94.2 0.095 2.1E-06 34.5 4.1 21 76-96 77-97 (217)
205 PLN02517 phosphatidylcholine-s 94.0 0.16 3.5E-06 38.5 5.2 38 57-97 196-233 (642)
206 PLN02847 triacylglycerol lipas 93.6 0.19 4.1E-06 38.1 5.0 21 77-97 251-271 (633)
207 KOG4388|consensus 93.5 0.14 3.1E-06 38.8 4.2 83 1-96 403-488 (880)
208 PF12048 DUF3530: Protein of u 93.0 0.46 1E-05 33.1 6.0 51 57-112 177-228 (310)
209 KOG2565|consensus 92.8 0.31 6.7E-06 35.1 4.9 70 26-106 188-257 (469)
210 KOG1282|consensus 92.8 0.48 1.1E-05 34.9 6.1 88 27-116 118-216 (454)
211 PF08237 PE-PPE: PE-PPE domain 92.4 0.63 1.4E-05 31.0 5.7 23 75-97 46-68 (225)
212 COG5153 CVT17 Putative lipase 92.3 0.46 9.9E-06 33.1 5.0 24 75-98 274-297 (425)
213 KOG4540|consensus 92.3 0.46 9.9E-06 33.1 5.0 24 75-98 274-297 (425)
214 COG3150 Predicted esterase [Ge 91.9 0.2 4.3E-06 32.0 2.8 21 78-98 60-80 (191)
215 COG3946 VirJ Type IV secretory 91.7 0.39 8.4E-06 34.8 4.3 66 20-97 281-346 (456)
216 PF03283 PAE: Pectinacetyleste 91.4 0.26 5.5E-06 35.2 3.3 38 57-95 137-174 (361)
217 KOG2369|consensus 91.4 0.45 9.7E-06 35.0 4.4 24 77-101 182-205 (473)
218 PF02089 Palm_thioest: Palmito 90.4 2.1 4.6E-05 29.6 6.8 35 77-112 80-115 (279)
219 PF05576 Peptidase_S37: PS-10 90.0 0.093 2E-06 38.0 0.0 82 27-114 89-170 (448)
220 TIGR03712 acc_sec_asp2 accesso 89.0 1.1 2.3E-05 33.3 4.8 75 29-115 318-392 (511)
221 KOG2029|consensus 89.0 1.5 3.2E-05 33.5 5.5 68 25-97 477-546 (697)
222 PLN02633 palmitoyl protein thi 88.5 2.2 4.7E-05 30.0 5.8 35 77-112 94-130 (314)
223 PLN02606 palmitoyl-protein thi 87.6 2.7 5.9E-05 29.4 5.8 35 77-112 95-131 (306)
224 KOG2551|consensus 87.4 3.1 6.7E-05 27.8 5.7 51 60-115 92-149 (230)
225 KOG1283|consensus 87.2 0.76 1.6E-05 32.5 3.0 71 26-97 71-142 (414)
226 PF09994 DUF2235: Uncharacteri 86.7 5.2 0.00011 27.4 6.9 38 57-96 74-111 (277)
227 PF04301 DUF452: Protein of un 85.8 1.8 3.9E-05 28.7 4.0 34 77-113 57-90 (213)
228 KOG3253|consensus 85.7 2.3 4.9E-05 32.7 4.9 97 1-110 183-283 (784)
229 COG3673 Uncharacterized conser 83.5 3.8 8.3E-05 29.2 5.0 38 57-96 104-141 (423)
230 PF10081 Abhydrolase_9: Alpha/ 80.5 3.8 8.2E-05 28.4 4.1 49 62-112 95-146 (289)
231 PF05277 DUF726: Protein of un 79.7 11 0.00023 27.0 6.2 37 76-113 219-260 (345)
232 PF08484 Methyltransf_14: C-me 78.0 11 0.00024 23.8 5.4 36 75-111 67-102 (160)
233 PF12242 Eno-Rase_NADH_b: NAD( 77.8 9.7 0.00021 21.1 4.5 42 57-98 20-61 (78)
234 TIGR02690 resist_ArsH arsenica 74.3 14 0.00029 24.7 5.3 30 57-86 106-138 (219)
235 KOG2541|consensus 70.2 33 0.00071 23.9 6.4 35 76-111 91-126 (296)
236 PF05705 DUF829: Eukaryotic pr 67.9 30 0.00065 22.8 6.0 80 24-114 25-113 (240)
237 PF10605 3HBOH: 3HB-oligomer h 65.4 34 0.00075 26.6 6.2 38 79-116 287-324 (690)
238 COG0431 Predicted flavoprotein 64.7 22 0.00049 22.7 4.7 54 19-92 63-116 (184)
239 COG3007 Uncharacterized paraqu 64.5 49 0.0011 23.5 6.5 40 59-98 23-63 (398)
240 PF11713 Peptidase_C80: Peptid 62.1 7.6 0.00016 24.4 2.1 37 53-89 75-116 (157)
241 cd00883 beta_CA_cladeA Carboni 60.8 18 0.00038 23.3 3.7 30 59-91 66-96 (182)
242 cd07218 Pat_iPLA2 Calcium-inde 58.8 22 0.00049 24.0 4.1 37 60-98 15-51 (245)
243 PF10142 PhoPQ_related: PhoPQ- 58.5 51 0.0011 23.9 5.9 55 58-114 150-208 (367)
244 PLN03006 carbonate dehydratase 57.8 19 0.00041 25.3 3.6 30 60-92 158-188 (301)
245 PLN03014 carbonic anhydrase 55.1 20 0.00043 25.7 3.4 30 60-92 206-236 (347)
246 cd07224 Pat_like Patatin-like 53.9 31 0.00066 23.0 4.1 37 60-98 14-50 (233)
247 PF14253 AbiH: Bacteriophage a 53.4 8.5 0.00018 25.9 1.4 15 75-89 233-247 (270)
248 KOG0256|consensus 53.2 37 0.0008 25.2 4.5 43 58-101 128-170 (471)
249 PLN00416 carbonate dehydratase 52.3 27 0.00058 24.0 3.6 31 59-92 125-156 (258)
250 PLN02154 carbonic anhydrase 51.5 31 0.00067 24.1 3.8 32 59-93 151-183 (290)
251 cd00884 beta_CA_cladeB Carboni 51.0 32 0.0007 22.3 3.7 30 60-92 73-103 (190)
252 PF00698 Acyl_transf_1: Acyl t 50.7 13 0.00029 25.8 2.0 21 77-97 84-104 (318)
253 PRK15219 carbonic anhydrase; P 50.6 33 0.00072 23.3 3.8 31 58-91 127-158 (245)
254 COG0331 FabD (acyl-carrier-pro 48.1 36 0.00077 24.0 3.8 23 75-97 83-105 (310)
255 cd07198 Patatin Patatin-like p 45.3 68 0.0015 20.0 4.5 35 60-98 13-47 (172)
256 PLN03019 carbonic anhydrase 44.7 34 0.00073 24.4 3.2 30 60-92 201-231 (330)
257 PF00484 Pro_CA: Carbonic anhy 44.7 72 0.0016 19.5 4.5 30 58-90 39-69 (153)
258 TIGR00128 fabD malonyl CoA-acy 43.6 22 0.00047 24.1 2.2 21 77-97 83-103 (290)
259 COG4003 Uncharacterized protei 43.4 30 0.00065 19.5 2.3 21 57-78 47-67 (98)
260 cd03131 GATase1_HTS Type 1 glu 43.4 21 0.00045 22.9 1.9 34 57-97 84-117 (175)
261 cd03378 beta_CA_cladeC Carboni 43.3 66 0.0014 20.2 4.1 32 57-91 75-107 (154)
262 PRK10437 carbonic anhydrase; P 43.0 52 0.0011 22.0 3.8 30 59-91 76-106 (220)
263 cd07220 Pat_PNPLA2 Patatin-lik 42.9 56 0.0012 22.2 4.0 39 60-98 19-57 (249)
264 cd07207 Pat_ExoU_VipD_like Exo 42.5 61 0.0013 20.5 4.0 34 61-98 15-48 (194)
265 PRK05368 homoserine O-succinyl 42.3 43 0.00094 23.5 3.5 34 57-97 121-154 (302)
266 smart00827 PKS_AT Acyl transfe 42.2 59 0.0013 22.1 4.2 21 77-97 82-102 (298)
267 KOG1551|consensus 42.2 19 0.00042 25.1 1.7 23 76-98 194-216 (371)
268 TIGR03131 malonate_mdcH malona 41.3 27 0.00058 23.9 2.3 21 77-97 76-96 (295)
269 cd07213 Pat17_PNPLA8_PNPLA9_li 39.7 80 0.0017 21.7 4.5 39 60-98 17-55 (288)
270 PRK10279 hypothetical protein; 38.5 61 0.0013 22.7 3.7 35 60-98 20-54 (300)
271 cd07221 Pat_PNPLA3 Patatin-lik 38.3 76 0.0017 21.6 4.1 39 60-98 15-53 (252)
272 PRK05447 1-deoxy-D-xylulose 5- 37.8 77 0.0017 23.2 4.2 30 78-109 3-34 (385)
273 cd07205 Pat_PNPLA6_PNPLA7_NTE1 37.2 1E+02 0.0022 19.2 4.4 35 60-98 15-49 (175)
274 cd07210 Pat_hypo_W_succinogene 36.7 1.1E+02 0.0025 20.1 4.7 35 60-98 15-49 (221)
275 PLN02752 [acyl-carrier protein 36.1 33 0.00071 24.2 2.2 19 79-97 126-144 (343)
276 COG0288 CynT Carbonic anhydras 35.7 63 0.0014 21.4 3.3 31 58-91 76-107 (207)
277 TIGR02816 pfaB_fam PfaB family 35.2 34 0.00075 26.1 2.3 22 77-98 265-286 (538)
278 cd07225 Pat_PNPLA6_PNPLA7 Pata 35.0 88 0.0019 21.9 4.1 35 60-98 30-64 (306)
279 cd07204 Pat_PNPLA_like Patatin 34.9 88 0.0019 21.0 4.0 38 60-98 14-52 (243)
280 COG1073 Hydrolases of the alph 34.6 1.7 3.7E-05 28.9 -4.3 21 75-95 158-178 (299)
281 cd07209 Pat_hypo_Ecoli_Z1214_l 34.4 1.2E+02 0.0026 19.9 4.5 35 60-98 13-47 (215)
282 COG1576 Uncharacterized conser 32.4 1.3E+02 0.0029 19.0 5.2 47 24-90 65-111 (155)
283 PF04260 DUF436: Protein of un 32.1 70 0.0015 20.6 2.9 28 59-87 2-29 (172)
284 COG4425 Predicted membrane pro 31.9 57 0.0012 24.6 2.8 32 61-93 382-413 (588)
285 cd07212 Pat_PNPLA9 Patatin-lik 31.4 48 0.001 23.3 2.4 38 61-98 15-53 (312)
286 COG2830 Uncharacterized protei 31.4 40 0.00088 21.8 1.8 31 78-111 58-88 (214)
287 PHA01735 hypothetical protein 31.1 68 0.0015 17.4 2.3 27 53-83 28-54 (76)
288 TIGR01440 conserved hypothetic 30.8 91 0.002 20.0 3.2 27 60-87 3-29 (172)
289 cd07222 Pat_PNPLA4 Patatin-lik 30.6 99 0.0021 20.8 3.7 36 60-96 14-50 (246)
290 COG1752 RssA Predicted esteras 30.6 1.1E+02 0.0023 21.3 4.0 35 60-98 26-60 (306)
291 cd07227 Pat_Fungal_NTE1 Fungal 30.2 1E+02 0.0022 21.2 3.8 34 60-97 25-58 (269)
292 cd07228 Pat_NTE_like_bacteria 30.0 1.4E+02 0.0031 18.6 4.7 34 61-98 16-49 (175)
293 KOG4372|consensus 29.2 15 0.00032 26.9 -0.4 19 76-94 149-167 (405)
294 PRK13690 hypothetical protein; 29.2 1.1E+02 0.0024 19.9 3.5 30 57-87 7-36 (184)
295 PF01734 Patatin: Patatin-like 28.5 63 0.0014 19.7 2.4 22 77-98 27-48 (204)
296 PRK14194 bifunctional 5,10-met 28.0 2.2E+02 0.0048 20.1 5.1 38 61-98 144-183 (301)
297 cd07208 Pat_hypo_Ecoli_yjju_li 27.9 70 0.0015 21.6 2.7 36 60-98 13-48 (266)
298 PF01113 DapB_N: Dihydrodipico 27.3 1.4E+02 0.0031 17.6 3.9 32 78-111 2-36 (124)
299 PF02972 Phycoerythr_ab: Phyco 27.2 45 0.00097 17.2 1.2 16 28-43 4-19 (57)
300 cd07219 Pat_PNPLA1 Patatin-lik 27.0 1.3E+02 0.0029 22.0 3.9 38 60-97 27-64 (382)
301 KOG1199|consensus 26.9 1.6E+02 0.0035 19.3 4.0 56 19-74 26-84 (260)
302 PF05116 S6PP: Sucrose-6F-phos 26.7 50 0.0011 22.2 1.8 26 60-86 166-191 (247)
303 cd07230 Pat_TGL4-5_like Triacy 26.6 91 0.002 23.0 3.2 34 61-98 89-122 (421)
304 PRK14188 bifunctional 5,10-met 26.6 2.3E+02 0.0051 19.9 5.2 38 61-98 143-182 (296)
305 PF04204 HTS: Homoserine O-suc 26.5 2.2E+02 0.0047 20.2 4.8 33 57-96 120-152 (298)
306 PF03848 TehB: Tellurite resis 25.2 48 0.001 21.6 1.4 17 19-35 45-61 (192)
307 PF01494 FAD_binding_3: FAD bi 24.9 1.6E+02 0.0034 20.1 4.0 21 78-98 3-23 (356)
308 PF07992 Pyr_redox_2: Pyridine 24.3 97 0.0021 19.3 2.7 21 78-98 1-21 (201)
309 COG4475 Uncharacterized protei 23.8 1.6E+02 0.0035 18.8 3.4 30 57-87 5-34 (180)
310 PF01118 Semialdhyde_dh: Semia 23.3 1.7E+02 0.0036 17.1 4.6 23 78-101 1-24 (121)
311 PRK14179 bifunctional 5,10-met 23.3 2.7E+02 0.0059 19.5 4.9 37 62-98 144-182 (284)
312 PF00598 Flu_M1: Influenza Mat 23.0 7 0.00015 23.8 -2.5 29 57-86 35-63 (157)
313 PF02590 SPOUT_MTase: Predicte 22.7 2.1E+02 0.0045 18.0 4.1 44 25-87 66-109 (155)
314 cd01819 Patatin_and_cPLA2 Pata 22.4 2E+02 0.0043 17.7 3.9 34 60-95 13-46 (155)
315 cd07211 Pat_PNPLA8 Patatin-lik 22.0 85 0.0018 21.7 2.2 17 80-96 44-60 (308)
316 cd07232 Pat_PLPL Patain-like p 21.9 1.6E+02 0.0036 21.6 3.7 34 61-98 83-116 (407)
317 PRK13512 coenzyme A disulfide 21.6 1.6E+02 0.0034 21.6 3.6 22 77-98 2-23 (438)
318 COG0707 MurG UDP-N-acetylgluco 20.8 1.2E+02 0.0026 21.9 2.8 23 75-97 182-204 (357)
319 COG0743 Dxr 1-deoxy-D-xylulose 20.8 2.4E+02 0.0053 20.7 4.2 28 62-94 16-43 (385)
320 PRK02048 4-hydroxy-3-methylbut 20.3 2.5E+02 0.0055 22.0 4.5 27 57-83 528-554 (611)
321 PLN02994 1-aminocyclopropane-1 20.2 2.3E+02 0.0051 17.6 5.3 49 61-112 99-150 (153)
No 1
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.88 E-value=2.2e-22 Score=131.20 Aligned_cols=102 Identities=25% Similarity=0.461 Sum_probs=88.8
Q ss_pred cccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHH
Q psy14549 13 FSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATA 92 (117)
Q Consensus 13 ~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~ 92 (117)
|++.+..++++++||+|+.+|+||+++.+.++......+++..+..|+.++++++.+ .+.+|++||+|+|+|+||++++
T Consensus 1 ~~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~-~~~iD~~ri~i~G~S~GG~~a~ 79 (213)
T PF00326_consen 1 PSFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIK-QYYIDPDRIGIMGHSYGGYLAL 79 (213)
T ss_dssp ---SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHH-TTSEEEEEEEEEEETHHHHHHH
T ss_pred CeeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhc-cccccceeEEEEcccccccccc
Confidence 345577788899999999999999999999998888888877789999999999999 6688999999999999999999
Q ss_pred HHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 93 MVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 93 ~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
.++.++ |++++++++.+|++|+.
T Consensus 80 ~~~~~~-~~~f~a~v~~~g~~d~~ 102 (213)
T PF00326_consen 80 LAATQH-PDRFKAAVAGAGVSDLF 102 (213)
T ss_dssp HHHHHT-CCGSSEEEEESE-SSTT
T ss_pred hhhccc-ceeeeeeeccceecchh
Confidence 999988 99999999999999975
No 2
>KOG2281|consensus
Probab=99.88 E-value=2.6e-22 Score=144.74 Aligned_cols=116 Identities=36% Similarity=0.655 Sum_probs=106.8
Q ss_pred CCCCCccccccccccch--hhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCc
Q psy14549 1 YGGPGSNIISDRFSIDF--HTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTK 78 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~--~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~ 78 (117)
||||+.+.+.+.|...- --..++++||+|+.+|-||+-..+..+....+.+.+..+++|+.+.++++.++.+.+|.+|
T Consensus 649 YGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdr 728 (867)
T KOG2281|consen 649 YGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDR 728 (867)
T ss_pred cCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchh
Confidence 89999999999887542 1245678999999999999999999999999999999999999999999999777899999
Q ss_pred eEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCCCC
Q psy14549 79 VGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFLY 117 (117)
Q Consensus 79 i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~~~ 117 (117)
|+|-|+|+||++++..+.++ |+.|+++|+-+|+++|++
T Consensus 729 V~vhGWSYGGYLSlm~L~~~-P~IfrvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 729 VGVHGWSYGGYLSLMGLAQY-PNIFRVAIAGAPVTDWRL 766 (867)
T ss_pred eeEeccccccHHHHHHhhcC-cceeeEEeccCcceeeee
Confidence 99999999999999999999 999999999999999974
No 3
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.87 E-value=1e-21 Score=145.04 Aligned_cols=110 Identities=27% Similarity=0.459 Sum_probs=101.0
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
||||..... +.+.+..+.++++||+|+.+|+||+.+.+.++.+....+++..+.+|+.++++++.+ .+.+|++|++
T Consensus 401 hGGP~~~~~---~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~-~~~~d~~ri~ 476 (620)
T COG1506 401 HGGPSAQVG---YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVK-LPLVDPERIG 476 (620)
T ss_pred CCCCccccc---cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHh-CCCcChHHeE
Confidence 899988543 677777788889999999999999999999999999999998999999999998877 9999999999
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
|+|+|+||+|++.++.+. | .|+++++.++.+||+
T Consensus 477 i~G~SyGGymtl~~~~~~-~-~f~a~~~~~~~~~~~ 510 (620)
T COG1506 477 ITGGSYGGYMTLLAATKT-P-RFKAAVAVAGGVDWL 510 (620)
T ss_pred EeccChHHHHHHHHHhcC-c-hhheEEeccCcchhh
Confidence 999999999999999987 5 899999999998885
No 4
>KOG2100|consensus
Probab=99.86 E-value=3e-21 Score=144.65 Aligned_cols=115 Identities=48% Similarity=0.921 Sum_probs=108.7
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
||||+...+.+.+..+|..+++..+|++|+.+|+||++..+.++.....++++..++.|+..+++++.+ .+.+|++||+
T Consensus 533 yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~-~~~iD~~ri~ 611 (755)
T KOG2100|consen 533 YGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLK-LPFIDRSRVA 611 (755)
T ss_pred cCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHh-cccccHHHeE
Confidence 899998888899999999998999999999999999999999999999999999999999999999999 6799999999
Q ss_pred EEecChHHHHHHHHHhhCCC-CceEEEEeeCCCCCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQ-NVFKCGVSVAPVTNFLY 117 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~-~~~~~~v~~~~~~~~~~ 117 (117)
|+|+|+||++++.++..+ | +.|+|+++++|++||++
T Consensus 612 i~GwSyGGy~t~~~l~~~-~~~~fkcgvavaPVtd~~~ 648 (755)
T KOG2100|consen 612 IWGWSYGGYLTLKLLESD-PGDVFKCGVAVAPVTDWLY 648 (755)
T ss_pred EeccChHHHHHHHHhhhC-cCceEEEEEEecceeeeee
Confidence 999999999999999998 7 67899999999999974
No 5
>PRK10115 protease 2; Provisional
Probab=99.79 E-value=6.8e-19 Score=131.26 Aligned_cols=111 Identities=15% Similarity=0.208 Sum_probs=97.9
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
||||+... ...|...+ +.++++||+|+.+|+||+++.+..|.+......+...++|+.++++++.+ .+..|++|++
T Consensus 452 hGg~~~~~-~p~f~~~~--~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~-~g~~d~~rl~ 527 (686)
T PRK10115 452 YGSYGASI-DADFSFSR--LSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLK-LGYGSPSLCY 527 (686)
T ss_pred ECCCCCCC-CCCccHHH--HHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHH-cCCCChHHeE
Confidence 89999975 45565543 55678999999999999999999999877666666779999999999999 7889999999
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
++|.|+||+++..++.+. |++|+|+|+..|+.|+.
T Consensus 528 i~G~S~GG~l~~~~~~~~-Pdlf~A~v~~vp~~D~~ 562 (686)
T PRK10115 528 GMGGSAGGMLMGVAINQR-PELFHGVIAQVPFVDVV 562 (686)
T ss_pred EEEECHHHHHHHHHHhcC-hhheeEEEecCCchhHh
Confidence 999999999999999988 99999999999999974
No 6
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.61 E-value=5.9e-15 Score=104.94 Aligned_cols=87 Identities=18% Similarity=0.299 Sum_probs=68.9
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...++++||.|+++|+||+|.+...... . ........+++++.+ .+.+|.+||+++|+|+||++++.++...
T Consensus 215 ~~~La~~Gy~vl~~D~pG~G~s~~~~~~---~----d~~~~~~avld~l~~-~~~vd~~ri~l~G~S~GG~~Al~~A~~~ 286 (414)
T PRK05077 215 RDYLAPRGIAMLTIDMPSVGFSSKWKLT---Q----DSSLLHQAVLNALPN-VPWVDHTRVAAFGFRFGANVAVRLAYLE 286 (414)
T ss_pred HHHHHhCCCEEEEECCCCCCCCCCCCcc---c----cHHHHHHHHHHHHHh-CcccCcccEEEEEEChHHHHHHHHHHhC
Confidence 4456789999999999999987542110 0 012233578888888 7778999999999999999999999888
Q ss_pred CCCceEEEEeeCCCCC
Q psy14549 99 TQNVFKCGVSVAPVTN 114 (117)
Q Consensus 99 ~~~~~~~~v~~~~~~~ 114 (117)
|++++++|+.+|+.+
T Consensus 287 -p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 -PPRLKAVACLGPVVH 301 (414)
T ss_pred -CcCceEEEEECCccc
Confidence 889999999998765
No 7
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.60 E-value=9.3e-15 Score=100.82 Aligned_cols=97 Identities=13% Similarity=0.201 Sum_probs=70.9
Q ss_pred cccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHH
Q psy14549 13 FSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATA 92 (117)
Q Consensus 13 ~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~ 92 (117)
|.+......++++||.|+++|+||+|.|...... .... .....|+.++++++.. ....+..+++++||||||.+++
T Consensus 74 ~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~--~~~~-~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~ 149 (330)
T PLN02298 74 WTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAY--VPNV-DLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICL 149 (330)
T ss_pred eehhHHHHHHHhCCCEEEEecCCCCCCCCCcccc--CCCH-HHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHH
Confidence 3333334446678999999999999988642110 0001 1237888899998876 3333456899999999999999
Q ss_pred HHHhhCCCCceEEEEeeCCCCC
Q psy14549 93 MVLATDTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 93 ~~~~~~~~~~~~~~v~~~~~~~ 114 (117)
.++.++ |++++++|.++|..+
T Consensus 150 ~~a~~~-p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 150 LIHLAN-PEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHhcC-cccceeEEEeccccc
Confidence 999998 999999999998654
No 8
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.58 E-value=1.6e-14 Score=94.32 Aligned_cols=107 Identities=19% Similarity=0.147 Sum_probs=75.1
Q ss_pred CCCCCccccccccc--cchhhHhhhcCCeEEEEECCCCCCCCChhh--hHhhhhcCCCcchhHHHHHHHHHHHhcCCCCC
Q psy14549 1 YGGPGSNIISDRFS--IDFHTYLVSKRHVIVVHIDARGSAYRSKEQ--EHSVYRNLGRYEIADQIAVVKYLTERFQFIDK 76 (117)
Q Consensus 1 ~gGp~~~~~~~~~~--~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~ 76 (117)
||+++... .+. ..+ ..++.+.||+|++||++|++.....+ ...........+..|+...++++++ ...+|+
T Consensus 20 HG~~~~~~---~~~~~~~~-~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~id~ 94 (212)
T TIGR01840 20 HGCGQTAS---AYVIDWGW-KAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA-NYSIDP 94 (212)
T ss_pred CCCCCCHH---HHhhhcCh-HHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH-hcCcCh
Confidence 77776532 222 122 34455689999999999976432211 1111111122347788899999988 455799
Q ss_pred CceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
+||+++|+|+||.+++.++.++ |+.+++++++++..
T Consensus 95 ~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 95 NRVYVTGLSAGGGMTAVLGCTY-PDVFAGGASNAGLP 130 (212)
T ss_pred hheEEEEECHHHHHHHHHHHhC-chhheEEEeecCCc
Confidence 9999999999999999999999 99999999888753
No 9
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.54 E-value=5.9e-14 Score=94.57 Aligned_cols=87 Identities=17% Similarity=0.168 Sum_probs=69.3
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...++++||.|+.+|+||+|.|.......... ...+|+..+++++++ . +..+++++||||||.+++.++.++
T Consensus 49 a~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~----~~~~Dv~~ai~~L~~-~---~~~~v~LvG~SmGG~vAl~~A~~~ 120 (266)
T TIGR03101 49 ARAFAAGGFGVLQIDLYGCGDSAGDFAAARWD----VWKEDVAAAYRWLIE-Q---GHPPVTLWGLRLGALLALDAANPL 120 (266)
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCccccCCHH----HHHHHHHHHHHHHHh-c---CCCCEEEEEECHHHHHHHHHHHhC
Confidence 34566799999999999999886543321111 236888889999877 3 346899999999999999999998
Q ss_pred CCCceEEEEeeCCCCC
Q psy14549 99 TQNVFKCGVSVAPVTN 114 (117)
Q Consensus 99 ~~~~~~~~v~~~~~~~ 114 (117)
|+.++++|..+|+++
T Consensus 121 -p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 121 -AAKCNRLVLWQPVVS 135 (266)
T ss_pred -ccccceEEEeccccc
Confidence 899999999999765
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.52 E-value=5.7e-14 Score=97.75 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=66.4
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..++++||.|+++|+||+|.|...... ...+ ...+.|+.+.++.+.. ....+..++.++||||||.+++.++.++
T Consensus 109 ~~l~~~g~~v~~~D~~G~G~S~~~~~~--~~~~-~~~~~dv~~~l~~l~~-~~~~~~~~~~LvGhSmGG~val~~a~~~- 183 (349)
T PLN02385 109 RKIASSGYGVFAMDYPGFGLSEGLHGY--IPSF-DDLVDDVIEHYSKIKG-NPEFRGLPSFLFGQSMGGAVALKVHLKQ- 183 (349)
T ss_pred HHHHhCCCEEEEecCCCCCCCCCCCCC--cCCH-HHHHHHHHHHHHHHHh-ccccCCCCEEEEEeccchHHHHHHHHhC-
Confidence 345578999999999999988642110 0011 1126677777777655 3333456899999999999999999999
Q ss_pred CCceEEEEeeCCCCC
Q psy14549 100 QNVFKCGVSVAPVTN 114 (117)
Q Consensus 100 ~~~~~~~v~~~~~~~ 114 (117)
|+.++++|.++|.+.
T Consensus 184 p~~v~glVLi~p~~~ 198 (349)
T PLN02385 184 PNAWDGAILVAPMCK 198 (349)
T ss_pred cchhhheeEeccccc
Confidence 999999999998654
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.48 E-value=2.7e-13 Score=91.20 Aligned_cols=90 Identities=18% Similarity=0.246 Sum_probs=66.7
Q ss_pred hhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 18 HTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 18 ~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
....++++||.|+++|+||+|.|..... ....+. ...+|+...++.+++. ....+++++|||+||.+++.++.+
T Consensus 44 ~~~~l~~~g~~via~D~~G~G~S~~~~~--~~~~~~-~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 44 LAENISSLGILVFSHDHIGHGRSNGEKM--MIDDFG-VYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYK 117 (276)
T ss_pred HHHHHHhCCCEEEEccCCCCCCCCCccC--CcCCHH-HHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHh
Confidence 3455667899999999999998864211 011111 1267777777776653 234689999999999999999999
Q ss_pred CCCCceEEEEeeCCCCC
Q psy14549 98 DTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 98 ~~~~~~~~~v~~~~~~~ 114 (117)
. |+.++++|.++|..+
T Consensus 118 ~-p~~i~~lil~~p~~~ 133 (276)
T PHA02857 118 N-PNLFTAMILMSPLVN 133 (276)
T ss_pred C-ccccceEEEeccccc
Confidence 8 999999999998765
No 12
>PRK13604 luxD acyl transferase; Provisional
Probab=99.47 E-value=2.4e-13 Score=92.82 Aligned_cols=88 Identities=14% Similarity=0.078 Sum_probs=68.3
Q ss_pred hhhHhhhcCCeEEEEECCCCC-CCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHH
Q psy14549 17 FHTYLVSKRHVIVVHIDARGS-AYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVL 95 (117)
Q Consensus 17 ~~~~~~a~~g~~vv~~d~rg~-g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~ 95 (117)
-.+..++++||.|+.+|.||+ |+|.+++.+.... ....|+.++++|+++ . +.++|+++||||||.+++..+
T Consensus 55 ~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s----~g~~Dl~aaid~lk~-~---~~~~I~LiG~SmGgava~~~A 126 (307)
T PRK13604 55 GLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMS----IGKNSLLTVVDWLNT-R---GINNLGLIAASLSARIAYEVI 126 (307)
T ss_pred HHHHHHHHCCCEEEEecCCCCCCCCCCccccCccc----ccHHHHHHHHHHHHh-c---CCCceEEEEECHHHHHHHHHh
Confidence 345667799999999999876 8887765433222 237899999999988 3 456899999999999987666
Q ss_pred hhCCCCceEEEEeeCCCCCC
Q psy14549 96 ATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 96 ~~~~~~~~~~~v~~~~~~~~ 115 (117)
... .++++|+.+|..|.
T Consensus 127 ~~~---~v~~lI~~sp~~~l 143 (307)
T PRK13604 127 NEI---DLSFLITAVGVVNL 143 (307)
T ss_pred cCC---CCCEEEEcCCcccH
Confidence 543 38999999999873
No 13
>PRK10566 esterase; Provisional
Probab=99.46 E-value=4.8e-13 Score=88.80 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=61.2
Q ss_pred hhhHhhhcCCeEEEEECCCCCCCCChhh-hHhhhhcCC--CcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHH
Q psy14549 17 FHTYLVSKRHVIVVHIDARGSAYRSKEQ-EHSVYRNLG--RYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAM 93 (117)
Q Consensus 17 ~~~~~~a~~g~~vv~~d~rg~g~~~~~~-~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~ 93 (117)
+....++++||.|+++|+||+|.+.... .......+. .....|+.++++++++ ...+|.+||+++|||+||.+++.
T Consensus 45 ~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~v~G~S~Gg~~al~ 123 (249)
T PRK10566 45 YFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIRE-EGWLLDDRLAVGGASMGGMTALG 123 (249)
T ss_pred HHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHh-cCCcCccceeEEeecccHHHHHH
Confidence 3455667899999999999987642211 100000000 1125677788888887 66678999999999999999999
Q ss_pred HHhhCCCCceEEEEe
Q psy14549 94 VLATDTQNVFKCGVS 108 (117)
Q Consensus 94 ~~~~~~~~~~~~~v~ 108 (117)
++.+. |+. .+++.
T Consensus 124 ~~~~~-~~~-~~~~~ 136 (249)
T PRK10566 124 IMARH-PWV-KCVAS 136 (249)
T ss_pred HHHhC-CCe-eEEEE
Confidence 98887 654 44433
No 14
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.46 E-value=1e-13 Score=97.46 Aligned_cols=87 Identities=23% Similarity=0.426 Sum_probs=63.5
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..++.+|++++++|.+|.|.+...... .+. ..-..++++|+.+ .+.+|.+||+++|.|+||+++..++...
T Consensus 212 ~~l~~rGiA~LtvDmPG~G~s~~~~l~---~D~----~~l~~aVLd~L~~-~p~VD~~RV~~~G~SfGGy~AvRlA~le- 282 (411)
T PF06500_consen 212 DYLAPRGIAMLTVDMPGQGESPKWPLT---QDS----SRLHQAVLDYLAS-RPWVDHTRVGAWGFSFGGYYAVRLAALE- 282 (411)
T ss_dssp CCCHHCT-EEEEE--TTSGGGTTT-S----S-C----CHHHHHHHHHHHH-STTEEEEEEEEEEETHHHHHHHHHHHHT-
T ss_pred HHHHhCCCEEEEEccCCCcccccCCCC---cCH----HHHHHHHHHHHhc-CCccChhheEEEEeccchHHHHHHHHhc-
Confidence 345689999999999999987543211 111 2335689999999 8999999999999999999999998777
Q ss_pred CCceEEEEeeCCCCCC
Q psy14549 100 QNVFKCGVSVAPVTNF 115 (117)
Q Consensus 100 ~~~~~~~v~~~~~~~~ 115 (117)
+++++++|+..|+++-
T Consensus 283 ~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 283 DPRLKAVVALGAPVHH 298 (411)
T ss_dssp TTT-SEEEEES---SC
T ss_pred ccceeeEeeeCchHhh
Confidence 7899999999997653
No 15
>PRK10985 putative hydrolase; Provisional
Probab=99.44 E-value=8.1e-13 Score=91.26 Aligned_cols=88 Identities=20% Similarity=0.237 Sum_probs=64.9
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..++++||.|+++|+||++++...... ........|+..++++++++. ...++.++||||||.+++.++..+
T Consensus 81 ~~l~~~G~~v~~~d~rG~g~~~~~~~~----~~~~~~~~D~~~~i~~l~~~~---~~~~~~~vG~S~GG~i~~~~~~~~- 152 (324)
T PRK10985 81 EAAQKRGWLGVVMHFRGCSGEPNRLHR----IYHSGETEDARFFLRWLQREF---GHVPTAAVGYSLGGNMLACLLAKE- 152 (324)
T ss_pred HHHHHCCCEEEEEeCCCCCCCccCCcc----eECCCchHHHHHHHHHHHHhC---CCCCEEEEEecchHHHHHHHHHhh-
Confidence 445689999999999999876432111 111123789999999998743 346899999999999888887776
Q ss_pred CCc--eEEEEeeCCCCCC
Q psy14549 100 QNV--FKCGVSVAPVTNF 115 (117)
Q Consensus 100 ~~~--~~~~v~~~~~~~~ 115 (117)
++. +.++++++++.++
T Consensus 153 ~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 153 GDDLPLDAAVIVSAPLML 170 (324)
T ss_pred CCCCCccEEEEEcCCCCH
Confidence 443 7888888887663
No 16
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.44 E-value=1.8e-12 Score=83.27 Aligned_cols=98 Identities=21% Similarity=0.225 Sum_probs=66.8
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
||.+... ..|.. ....+ ++||.|+++|+||+|.+..... .......+..+.+..+.+.. ...++.
T Consensus 5 hG~~~~~---~~~~~--~~~~l-~~~~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~l~~~l~~~---~~~~~~ 69 (228)
T PF12697_consen 5 HGFGGSS---ESWDP--LAEAL-ARGYRVIAFDLPGHGRSDPPPD------YSPYSIEDYAEDLAELLDAL---GIKKVI 69 (228)
T ss_dssp -STTTTG---GGGHH--HHHHH-HTTSEEEEEECTTSTTSSSHSS------GSGGSHHHHHHHHHHHHHHT---TTSSEE
T ss_pred CCCCCCH---HHHHH--HHHHH-hCCCEEEEEecCCccccccccc------cCCcchhhhhhhhhhccccc---cccccc
Confidence 5665552 33333 33345 4899999999999999876432 00112333443333333322 337899
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~ 114 (117)
++|||+||.+++.++.++ |+.+++++.++|...
T Consensus 70 lvG~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARY-PDRVKGLVLLSPPPP 102 (228)
T ss_dssp EEEETHHHHHHHHHHHHS-GGGEEEEEEESESSS
T ss_pred cccccccccccccccccc-ccccccceeeccccc
Confidence 999999999999999999 999999999998764
No 17
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.43 E-value=5.7e-13 Score=97.78 Aligned_cols=88 Identities=20% Similarity=0.244 Sum_probs=73.2
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..++++||+|+.+|+||+|.|.+..... ...+..|+.++++|+.+ ++..+ .||+++|+|+||.+++.++...
T Consensus 47 ~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-----~~~~~~D~~~~i~~l~~-q~~~~-~~v~~~G~S~GG~~a~~~a~~~- 118 (550)
T TIGR00976 47 AWFVAQGYAVVIQDTRGRGASEGEFDLL-----GSDEAADGYDLVDWIAK-QPWCD-GNVGMLGVSYLAVTQLLAAVLQ- 118 (550)
T ss_pred HHHHhCCcEEEEEeccccccCCCceEec-----CcccchHHHHHHHHHHh-CCCCC-CcEEEEEeChHHHHHHHHhccC-
Confidence 4566899999999999999987653221 12458999999999988 56545 6999999999999999999988
Q ss_pred CCceEEEEeeCCCCCC
Q psy14549 100 QNVFKCGVSVAPVTNF 115 (117)
Q Consensus 100 ~~~~~~~v~~~~~~~~ 115 (117)
|+.+++++..++..|.
T Consensus 119 ~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 119 PPALRAIAPQEGVWDL 134 (550)
T ss_pred CCceeEEeecCcccch
Confidence 8899999999988764
No 18
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.43 E-value=1.1e-12 Score=89.88 Aligned_cols=90 Identities=20% Similarity=0.163 Sum_probs=67.5
Q ss_pred hHhhhcCCeEEEEECCCCCCCCCh--hhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSK--EQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
...+.++||.|+++|+||+|.|.. .-.-.... ....|+...++.+... .-..+++++||||||.+++.++.
T Consensus 54 a~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~----~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~ 126 (298)
T COG2267 54 ADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFA----DYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLA 126 (298)
T ss_pred HHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHH----HHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHH
Confidence 455678999999999999999963 11111111 1256666666665542 13468999999999999999999
Q ss_pred hCCCCceEEEEeeCCCCCCC
Q psy14549 97 TDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 97 ~~~~~~~~~~v~~~~~~~~~ 116 (117)
++ +..++++|..+|.....
T Consensus 127 ~~-~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 127 RY-PPRIDGLVLSSPALGLG 145 (298)
T ss_pred hC-CccccEEEEECccccCC
Confidence 99 88999999999987653
No 19
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.43 E-value=3.9e-13 Score=90.83 Aligned_cols=87 Identities=24% Similarity=0.345 Sum_probs=69.3
Q ss_pred hhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC
Q psy14549 22 VSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN 101 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~ 101 (117)
++++||+||..|.||.+.|.+.+... ...+..|..++|+|+.+ ++.. ..||+++|.|++|..++.++... |+
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~-----~~~e~~D~~d~I~W~~~-Qpws-~G~VGm~G~SY~G~~q~~~A~~~-~p 124 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPM-----SPNEAQDGYDTIEWIAA-QPWS-NGKVGMYGISYGGFTQWAAAARR-PP 124 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TT-----SHHHHHHHHHHHHHHHH-CTTE-EEEEEEEEETHHHHHHHHHHTTT--T
T ss_pred HHhCCCEEEEECCcccccCCCccccC-----ChhHHHHHHHHHHHHHh-CCCC-CCeEEeeccCHHHHHHHHHHhcC-CC
Confidence 67899999999999999998876543 22458999999999999 6764 46999999999999999999977 88
Q ss_pred ceEEEEeeCCCCCCC
Q psy14549 102 VFKCGVSVAPVTNFL 116 (117)
Q Consensus 102 ~~~~~v~~~~~~~~~ 116 (117)
.+++++...+..|+.
T Consensus 125 ~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 125 HLKAIVPQSGWSDLY 139 (272)
T ss_dssp TEEEEEEESE-SBTC
T ss_pred CceEEEecccCCccc
Confidence 999999999988864
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=99.42 E-value=1e-12 Score=90.91 Aligned_cols=89 Identities=18% Similarity=0.097 Sum_probs=63.8
Q ss_pred hhhcCCeEEEEECCCCCCCCChhhhHhhhhcCC--CcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 21 LVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLG--RYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
.++++||.|+++|+||+|.|............. ...+.|+.++++.+.+. .+..++.++||||||.+++.++.++
T Consensus 76 ~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~l~GhSmGG~ia~~~a~~~ 152 (330)
T PRK10749 76 DLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP---GPYRKRYALAHSMGGAILTLFLQRH 152 (330)
T ss_pred HHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc---CCCCCeEEEEEcHHHHHHHHHHHhC
Confidence 355799999999999999986432111001000 11255666666665442 2457899999999999999999999
Q ss_pred CCCceEEEEeeCCCC
Q psy14549 99 TQNVFKCGVSVAPVT 113 (117)
Q Consensus 99 ~~~~~~~~v~~~~~~ 113 (117)
|+.++++|..+|..
T Consensus 153 -p~~v~~lvl~~p~~ 166 (330)
T PRK10749 153 -PGVFDAIALCAPMF 166 (330)
T ss_pred -CCCcceEEEECchh
Confidence 99999999999864
No 21
>PLN02511 hydrolase
Probab=99.41 E-value=1.5e-12 Score=92.02 Aligned_cols=86 Identities=19% Similarity=0.204 Sum_probs=66.5
Q ss_pred hhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC
Q psy14549 22 VSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN 101 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~ 101 (117)
+.++||.|+++|+||+|++..... ..+.....+|+.++++++..+. ...++.++|||+||.+++.++.++ |+
T Consensus 125 ~~~~g~~vv~~d~rG~G~s~~~~~----~~~~~~~~~Dl~~~i~~l~~~~---~~~~~~lvG~SlGg~i~~~yl~~~-~~ 196 (388)
T PLN02511 125 ARSKGWRVVVFNSRGCADSPVTTP----QFYSASFTGDLRQVVDHVAGRY---PSANLYAAGWSLGANILVNYLGEE-GE 196 (388)
T ss_pred HHHCCCEEEEEecCCCCCCCCCCc----CEEcCCchHHHHHHHHHHHHHC---CCCCEEEEEechhHHHHHHHHHhc-CC
Confidence 347899999999999998864211 1111234789999999998743 345899999999999999999998 87
Q ss_pred c--eEEEEeeCCCCCC
Q psy14549 102 V--FKCGVSVAPVTNF 115 (117)
Q Consensus 102 ~--~~~~v~~~~~~~~ 115 (117)
. +.+++++++..|.
T Consensus 197 ~~~v~~~v~is~p~~l 212 (388)
T PLN02511 197 NCPLSGAVSLCNPFDL 212 (388)
T ss_pred CCCceEEEEECCCcCH
Confidence 6 7888888776653
No 22
>KOG1455|consensus
Probab=99.41 E-value=6.2e-13 Score=89.68 Aligned_cols=98 Identities=17% Similarity=0.205 Sum_probs=73.1
Q ss_pred cccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHH
Q psy14549 13 FSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATA 92 (117)
Q Consensus 13 ~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~ 92 (117)
|.+.-....+++.||.|.++|++|+|.|.+.-.- ..++ ...+.|+...++.+.. +.....-..+++||||||.+++
T Consensus 69 ~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~y--i~~~-d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~L 144 (313)
T KOG1455|consen 69 WRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAY--VPSF-DLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVAL 144 (313)
T ss_pred hhHHHHHHHHHhCCCeEEEeeccCCCcCCCCccc--CCcH-HHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHH
Confidence 3333344567789999999999999998752111 1111 1237888888888766 3333445799999999999999
Q ss_pred HHHhhCCCCceEEEEeeCCCCCC
Q psy14549 93 MVLATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 93 ~~~~~~~~~~~~~~v~~~~~~~~ 115 (117)
.++.+. |+.+.++|.++|+|-.
T Consensus 145 l~~~k~-p~~w~G~ilvaPmc~i 166 (313)
T KOG1455|consen 145 LIALKD-PNFWDGAILVAPMCKI 166 (313)
T ss_pred HHHhhC-Ccccccceeeeccccc
Confidence 999998 9999999999998753
No 23
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.40 E-value=2.6e-12 Score=84.36 Aligned_cols=90 Identities=21% Similarity=0.185 Sum_probs=68.3
Q ss_pred hHhhhcCCeEEEEECCCCC---CCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDARGS---AYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVL 95 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~---g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~ 95 (117)
..++.++||+|+.|+.... ..++..+. .....+..+...+.+.++++.+ ...+|++||.+.|+|.||+|+..++
T Consensus 39 ~~lAd~~GfivvyP~~~~~~~~~~cw~w~~--~~~~~g~~d~~~i~~lv~~v~~-~~~iD~~RVyv~G~S~Gg~ma~~la 115 (220)
T PF10503_consen 39 NALADREGFIVVYPEQSRRANPQGCWNWFS--DDQQRGGGDVAFIAALVDYVAA-RYNIDPSRVYVTGLSNGGMMANVLA 115 (220)
T ss_pred HHHhhcCCeEEEcccccccCCCCCcccccc--cccccCccchhhHHHHHHhHhh-hcccCCCceeeEEECHHHHHHHHHH
Confidence 3566678999999996532 23333222 1112222346678888999988 5678999999999999999999999
Q ss_pred hhCCCCceEEEEeeCCC
Q psy14549 96 ATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 96 ~~~~~~~~~~~v~~~~~ 112 (117)
..+ |++|.++..++++
T Consensus 116 ~~~-pd~faa~a~~sG~ 131 (220)
T PF10503_consen 116 CAY-PDLFAAVAVVSGV 131 (220)
T ss_pred HhC-CccceEEEeeccc
Confidence 999 9999999988875
No 24
>PLN02965 Probable pheophorbidase
Probab=99.39 E-value=3.9e-12 Score=84.92 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=63.0
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCC-Cce
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDK-TKV 79 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~-~~i 79 (117)
||.+.. ...|.. ....+++++|.|+++|+||+|.|...... .....++...+..+.+. ++. .++
T Consensus 10 HG~~~~---~~~w~~--~~~~L~~~~~~via~Dl~G~G~S~~~~~~-------~~~~~~~a~dl~~~l~~---l~~~~~~ 74 (255)
T PLN02965 10 HGASHG---AWCWYK--LATLLDAAGFKSTCVDLTGAGISLTDSNT-------VSSSDQYNRPLFALLSD---LPPDHKV 74 (255)
T ss_pred CCCCCC---cCcHHH--HHHHHhhCCceEEEecCCcCCCCCCCccc-------cCCHHHHHHHHHHHHHh---cCCCCCE
Confidence 566544 223432 33345578999999999999988542110 01133333333333232 222 489
Q ss_pred EEEecChHHHHHHHHHhhCCCCceEEEEeeCCC
Q psy14549 80 GIWGWSYGGFATAMVLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 80 ~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~ 112 (117)
.++||||||.+++.++.++ |++++.+|.+++.
T Consensus 75 ~lvGhSmGG~ia~~~a~~~-p~~v~~lvl~~~~ 106 (255)
T PLN02965 75 ILVGHSIGGGSVTEALCKF-TDKISMAIYVAAA 106 (255)
T ss_pred EEEecCcchHHHHHHHHhC-chheeEEEEEccc
Confidence 9999999999999999999 9999998887753
No 25
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.39 E-value=3.4e-12 Score=85.04 Aligned_cols=100 Identities=17% Similarity=0.244 Sum_probs=65.8
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
||+++.. ...|. ....++.+.||.|+++|.||+|.+........ ....++..+.+..+.+. .+.+++.
T Consensus 32 hG~~g~~--~~~~~--~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~ 99 (288)
T TIGR01250 32 HGGPGMS--HEYLE--NLRELLKEEGREVIMYDQLGCGYSDQPDDSDE-----LWTIDYFVDELEEVREK---LGLDKFY 99 (288)
T ss_pred cCCCCcc--HHHHH--HHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc-----cccHHHHHHHHHHHHHH---cCCCcEE
Confidence 6666653 11122 23444545599999999999998754211100 01244444444444442 3446799
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
++|||+||.+++.++..+ |+.+++++..+++.
T Consensus 100 liG~S~Gg~ia~~~a~~~-p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 100 LLGHSWGGMLAQEYALKY-GQHLKGLIISSMLD 131 (288)
T ss_pred EEEeehHHHHHHHHHHhC-ccccceeeEecccc
Confidence 999999999999999999 99999999877653
No 26
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.38 E-value=4.3e-12 Score=86.58 Aligned_cols=83 Identities=18% Similarity=0.184 Sum_probs=58.6
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..++++||.|+++|.||+|.|....... ....++..+.+..+.++ ++.+++.++|||+||.+++.++.++
T Consensus 67 ~~L~~~gy~vi~~Dl~G~G~S~~~~~~~------~~~~~~~a~~l~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~- 136 (302)
T PRK00870 67 PILAAAGHRVIAPDLIGFGRSDKPTRRE------DYTYARHVEWMRSWFEQ---LDLTDVTLVCQDWGGLIGLRLAAEH- 136 (302)
T ss_pred HHHHhCCCEEEEECCCCCCCCCCCCCcc------cCCHHHHHHHHHHHHHH---cCCCCEEEEEEChHHHHHHHHHHhC-
Confidence 3455679999999999999885421110 11133344333333332 3456899999999999999999999
Q ss_pred CCceEEEEeeCCC
Q psy14549 100 QNVFKCGVSVAPV 112 (117)
Q Consensus 100 ~~~~~~~v~~~~~ 112 (117)
|+.+++++.+++.
T Consensus 137 p~~v~~lvl~~~~ 149 (302)
T PRK00870 137 PDRFARLVVANTG 149 (302)
T ss_pred hhheeEEEEeCCC
Confidence 9999999988763
No 27
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.38 E-value=5.8e-13 Score=92.66 Aligned_cols=91 Identities=23% Similarity=0.327 Sum_probs=61.3
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhh----------hHhhh--hcCC----CcchhHHHHHHHHHHHhcCCCCCCceEEEe
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQ----------EHSVY--RNLG----RYEIADQIAVVKYLTERFQFIDKTKVGIWG 83 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~----------~~~~~--~~~~----~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G 83 (117)
..++++||+|+++|.+|.|+....- ..... -.++ .....|...+++||.+ ++.+|++||+++|
T Consensus 154 ~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~s-lpeVD~~RIG~~G 232 (390)
T PF12715_consen 154 DQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLAS-LPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT--TTEEEEEEEEEE
T ss_pred HHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhc-CcccCccceEEEe
Confidence 4567999999999999998753310 01101 0111 1236677789999999 9999999999999
Q ss_pred cChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 84 WSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 84 ~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
+|+||+.++.+++-+ +++++.|+.+-++
T Consensus 233 fSmGg~~a~~LaALD--dRIka~v~~~~l~ 260 (390)
T PF12715_consen 233 FSMGGYRAWWLAALD--DRIKATVANGYLC 260 (390)
T ss_dssp EGGGHHHHHHHHHH---TT--EEEEES-B-
T ss_pred ecccHHHHHHHHHcc--hhhHhHhhhhhhh
Confidence 999999999999997 6788877665443
No 28
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.37 E-value=8.5e-13 Score=85.68 Aligned_cols=102 Identities=23% Similarity=0.193 Sum_probs=72.8
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh--cCCCCCCc
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER--FQFIDKTK 78 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~d~~~ 78 (117)
|||....- .......+...++.+.|+.|+.+|||-..+..- ....+|+.++++|+.++ ...+|.++
T Consensus 5 HGGg~~~g-~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~-----------p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 5 HGGGWVMG-SKESHWPFAARLAAERGFVVVSIDYRLAPEAPF-----------PAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp --STTTSC-GTTTHHHHHHHHHHHHTSEEEEEE---TTTSST-----------THHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CCcccccC-ChHHHHHHHHHHHhhccEEEEEeeccccccccc-----------cccccccccceeeeccccccccccccc
Confidence 78877743 333444455666656899999999997654321 12389999999999885 12368999
Q ss_pred eEEEecChHHHHHHHHHhhCCCC----ceEEEEeeCCCCCC
Q psy14549 79 VGIWGWSYGGFATAMVLATDTQN----VFKCGVSVAPVTNF 115 (117)
Q Consensus 79 i~i~G~S~Gg~~a~~~~~~~~~~----~~~~~v~~~~~~~~ 115 (117)
|+++|+|.||.+++.++... .+ .+++++.++|..|+
T Consensus 73 i~l~G~SAGg~la~~~~~~~-~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRA-RDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHH-HHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhh-hhhcccchhhhhcccccccc
Confidence 99999999999999988764 22 48999999998876
No 29
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.37 E-value=3.2e-12 Score=82.90 Aligned_cols=87 Identities=15% Similarity=0.084 Sum_probs=72.4
Q ss_pred hhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 17 FHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 17 ~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
.....+.++||.|.+|++||+|..+..+.....++| ..|+....++|++ .+. ++|+++|.||||-+++.++.
T Consensus 33 ~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~-~gy---~eI~v~GlSmGGv~alkla~ 104 (243)
T COG1647 33 MLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKE-AGY---DEIAVVGLSMGGVFALKLAY 104 (243)
T ss_pred HHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHH-cCC---CeEEEEeecchhHHHHHHHh
Confidence 345667789999999999999999988888888876 8899999999997 443 69999999999999999999
Q ss_pred hCCCCceEEEEeeCCCCC
Q psy14549 97 TDTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 97 ~~~~~~~~~~v~~~~~~~ 114 (117)
++ | ++++|.+++..+
T Consensus 105 ~~-p--~K~iv~m~a~~~ 119 (243)
T COG1647 105 HY-P--PKKIVPMCAPVN 119 (243)
T ss_pred hC-C--ccceeeecCCcc
Confidence 98 6 556665555443
No 30
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.36 E-value=2.6e-12 Score=86.41 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=57.4
Q ss_pred hhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC
Q psy14549 22 VSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN 101 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~ 101 (117)
+++.||.|+++|+||+|.|......... .....+|+.++++. ++.+++.++||||||.+++.++.++ |+
T Consensus 56 l~~~~~~vi~~D~~G~G~S~~~~~~~~~---~~~~~~~l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~-p~ 124 (282)
T TIGR03343 56 FVDAGYRVILKDSPGFNKSDAVVMDEQR---GLVNARAVKGLMDA-------LDIEKAHLVGNSMGGATALNFALEY-PD 124 (282)
T ss_pred HHhCCCEEEEECCCCCCCCCCCcCcccc---cchhHHHHHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhC-hH
Confidence 3467999999999999998653211000 00113444433332 3557999999999999999999999 99
Q ss_pred ceEEEEeeCCC
Q psy14549 102 VFKCGVSVAPV 112 (117)
Q Consensus 102 ~~~~~v~~~~~ 112 (117)
+++++|.++|.
T Consensus 125 ~v~~lvl~~~~ 135 (282)
T TIGR03343 125 RIGKLILMGPG 135 (282)
T ss_pred hhceEEEECCC
Confidence 99999998864
No 31
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.34 E-value=1.6e-11 Score=83.08 Aligned_cols=42 Identities=26% Similarity=0.417 Sum_probs=38.7
Q ss_pred CCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCC
Q psy14549 73 FIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 73 ~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~ 115 (117)
.++.+|++++|+||||++++.++.++ |+.++++++++|+.++
T Consensus 134 ~~~~~~~~~~G~S~GG~~a~~~a~~~-p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 134 PLDGERQGITGHSMGGHGALVIALKN-PDRFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCCceEEEEEChhHHHHHHHHHhC-cccceEEEEECCccCc
Confidence 36888999999999999999999999 9999999999998765
No 32
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.34 E-value=8.7e-12 Score=94.44 Aligned_cols=90 Identities=21% Similarity=0.196 Sum_probs=73.7
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh--------------cCCCCCCceEEEec
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER--------------FQFIDKTKVGIWGW 84 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------------~~~~d~~~i~i~G~ 84 (117)
...++++||+|+..|.||.++|.+.+.. ++..+..|..++|+|+..+ .++. ..||+++|.
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~Ws-nGkVGm~G~ 345 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWS-NGKVAMTGK 345 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHHhhCCccccccccccccccCCC-CCeeEEEEE
Confidence 4556689999999999999999886432 2234689999999999852 1221 369999999
Q ss_pred ChHHHHHHHHHhhCCCCceEEEEeeCCCCCC
Q psy14549 85 SYGGFATAMVLATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 85 S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~ 115 (117)
|+||++++.++... |+.++++|+.+++.||
T Consensus 346 SY~G~~~~~aAa~~-pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 346 SYLGTLPNAVATTG-VEGLETIIPEAAISSW 375 (767)
T ss_pred cHHHHHHHHHHhhC-CCcceEEEeeCCCCcH
Confidence 99999999999988 8899999999999876
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.34 E-value=1.5e-11 Score=79.97 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=60.7
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHH-HHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAV-VKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
...++ +||.|+++|.||+|.+..... .......+.... +..+.+. .+.+++.++|||+||.+++.++.+
T Consensus 21 ~~~L~-~~~~v~~~d~~g~G~s~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 21 IELLG-PHFRCLAIDLPGHGSSQSPDE------IERYDFEEAAQDILATLLDQ---LGIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred HHHhc-ccCeEEEEcCCCCCCCCCCCc------cChhhHHHHHHHHHHHHHHH---cCCCeEEEEEeccHHHHHHHHHHh
Confidence 34454 799999999999998854211 011123444443 4444442 355789999999999999999999
Q ss_pred CCCCceEEEEeeCCCCC
Q psy14549 98 DTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 98 ~~~~~~~~~v~~~~~~~ 114 (117)
+ |+.+++++.+++...
T Consensus 91 ~-~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 91 Y-PERVQGLILESGSPG 106 (251)
T ss_pred C-chheeeeEEecCCCC
Confidence 9 999999998887543
No 34
>PLN02442 S-formylglutathione hydrolase
Probab=99.34 E-value=1e-11 Score=84.47 Aligned_cols=52 Identities=25% Similarity=0.517 Sum_probs=42.9
Q ss_pred HHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCC
Q psy14549 63 VVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 63 ~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~ 115 (117)
..+++.+....+|.++++|+|+||||++++.++.++ |++++++++.+|++|+
T Consensus 129 l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~-p~~~~~~~~~~~~~~~ 180 (283)
T PLN02442 129 LPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKN-PDKYKSVSAFAPIANP 180 (283)
T ss_pred HHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhC-chhEEEEEEECCccCc
Confidence 333444433346889999999999999999999999 9999999999999875
No 35
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.33 E-value=6.1e-12 Score=85.49 Aligned_cols=94 Identities=14% Similarity=0.077 Sum_probs=63.2
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
||.|+.. ..|.. ....++++ +.|+++|.||+|.|...... ....+..+.+..+.+. +..+++.
T Consensus 34 HG~~~~~---~~w~~--~~~~L~~~-~~via~D~~G~G~S~~~~~~--------~~~~~~a~dl~~ll~~---l~~~~~~ 96 (295)
T PRK03592 34 HGNPTSS---YLWRN--IIPHLAGL-GRCLAPDLIGMGASDKPDID--------YTFADHARYLDAWFDA---LGLDDVV 96 (295)
T ss_pred CCCCCCH---HHHHH--HHHHHhhC-CEEEEEcCCCCCCCCCCCCC--------CCHHHHHHHHHHHHHH---hCCCCeE
Confidence 5555442 23433 23345455 49999999999998653211 1133333333333332 2446899
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~ 112 (117)
++|||+||.+++.++.++ |++++++|.+++.
T Consensus 97 lvGhS~Gg~ia~~~a~~~-p~~v~~lil~~~~ 127 (295)
T PRK03592 97 LVGHDWGSALGFDWAARH-PDRVRGIAFMEAI 127 (295)
T ss_pred EEEECHHHHHHHHHHHhC-hhheeEEEEECCC
Confidence 999999999999999999 9999999998874
No 36
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.33 E-value=1.5e-11 Score=83.18 Aligned_cols=85 Identities=16% Similarity=0.128 Sum_probs=64.5
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...++++||.|+++|+||+|.|..... .+ .....|+.++++++++..+ ..++|.++|||+||.+++.++..
T Consensus 50 a~~l~~~G~~v~~~Dl~G~G~S~~~~~-----~~-~~~~~d~~~~~~~l~~~~~--g~~~i~l~G~S~Gg~~a~~~a~~- 120 (274)
T TIGR03100 50 ARRLAEAGFPVLRFDYRGMGDSEGENL-----GF-EGIDADIAAAIDAFREAAP--HLRRIVAWGLCDAASAALLYAPA- 120 (274)
T ss_pred HHHHHHCCCEEEEeCCCCCCCCCCCCC-----CH-HHHHHHHHHHHHHHHhhCC--CCCcEEEEEECHHHHHHHHHhhh-
Confidence 345668899999999999998764321 11 1236889999999987322 23679999999999999998765
Q ss_pred CCCceEEEEeeCCCC
Q psy14549 99 TQNVFKCGVSVAPVT 113 (117)
Q Consensus 99 ~~~~~~~~v~~~~~~ 113 (117)
++.++++|.++|..
T Consensus 121 -~~~v~~lil~~p~~ 134 (274)
T TIGR03100 121 -DLRVAGLVLLNPWV 134 (274)
T ss_pred -CCCccEEEEECCcc
Confidence 46799999998864
No 37
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.32 E-value=2.1e-11 Score=74.47 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=60.2
Q ss_pred hhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 17 FHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 17 ~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
.....++++||.|+.+|+|+.+.+.. ..+...+++.+.++.. +.+++.++|||+||.+++.++.
T Consensus 17 ~~~~~l~~~G~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 17 PLAEALAEQGYAVVAFDYPGHGDSDG--------------ADAVERVLADIRAGYP--DPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHHHHHHHTTEEEEEESCTTSTTSHH--------------SHHHHHHHHHHHHHHC--TCCEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEecCCCCccch--------------hHHHHHHHHHHHhhcC--CCCcEEEEEEccCcHHHHHHhh
Confidence 34455668899999999999887722 2345566666533233 8899999999999999999998
Q ss_pred hCCCCceEEEEeeCCC
Q psy14549 97 TDTQNVFKCGVSVAPV 112 (117)
Q Consensus 97 ~~~~~~~~~~v~~~~~ 112 (117)
++ +.++++|.++|.
T Consensus 81 ~~--~~v~~~v~~~~~ 94 (145)
T PF12695_consen 81 RN--PRVKAVVLLSPY 94 (145)
T ss_dssp HS--TTESEEEEESES
T ss_pred hc--cceeEEEEecCc
Confidence 86 578999999884
No 38
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.31 E-value=1.7e-11 Score=83.22 Aligned_cols=102 Identities=16% Similarity=0.112 Sum_probs=65.8
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
||.+++ ...|.. ....++ ..|.|+++|.||+|.|........... .....++..+.+..+.++. ..+++.
T Consensus 36 HG~~~~---~~~w~~--~~~~L~-~~~~vi~~DlpG~G~S~~~~~~~~~~~-~~~~~~~~a~~l~~~l~~l---~~~~~~ 105 (294)
T PLN02824 36 HGFGGN---ADHWRK--NTPVLA-KSHRVYAIDLLGYGYSDKPNPRSAPPN-SFYTFETWGEQLNDFCSDV---VGDPAF 105 (294)
T ss_pred CCCCCC---hhHHHH--HHHHHH-hCCeEEEEcCCCCCCCCCCcccccccc-ccCCHHHHHHHHHHHHHHh---cCCCeE
Confidence 555554 233443 223453 457999999999999865321110000 0122455554444444322 346899
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
++||||||.+++.++.++ |++++++|.+++..
T Consensus 106 lvGhS~Gg~va~~~a~~~-p~~v~~lili~~~~ 137 (294)
T PLN02824 106 VICNSVGGVVGLQAAVDA-PELVRGVMLINISL 137 (294)
T ss_pred EEEeCHHHHHHHHHHHhC-hhheeEEEEECCCc
Confidence 999999999999999999 99999999988743
No 39
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.31 E-value=1.5e-11 Score=79.78 Aligned_cols=78 Identities=26% Similarity=0.281 Sum_probs=62.4
Q ss_pred eEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEE
Q psy14549 27 VIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCG 106 (117)
Q Consensus 27 ~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~ 106 (117)
|.|+++|.||.|.|... ...........|+.+.++.+.++. ..+++.++||||||.+++.++..+ |++++++
T Consensus 1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~vG~S~Gg~~~~~~a~~~-p~~v~~l 72 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREAL---GIKKINLVGHSMGGMLALEYAAQY-PERVKKL 72 (230)
T ss_dssp EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHH---TTSSEEEEEETHHHHHHHHHHHHS-GGGEEEE
T ss_pred CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHh---CCCCeEEEEECCChHHHHHHHHHC-chhhcCc
Confidence 78999999999998741 011122334788899999888853 345699999999999999999999 9999999
Q ss_pred EeeCCC
Q psy14549 107 VSVAPV 112 (117)
Q Consensus 107 v~~~~~ 112 (117)
|.++++
T Consensus 73 vl~~~~ 78 (230)
T PF00561_consen 73 VLISPP 78 (230)
T ss_dssp EEESES
T ss_pred EEEeee
Confidence 998875
No 40
>PRK10162 acetyl esterase; Provisional
Probab=99.31 E-value=1.6e-11 Score=84.77 Aligned_cols=103 Identities=17% Similarity=0.024 Sum_probs=71.3
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh--cCCCCCCc
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER--FQFIDKTK 78 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~d~~~ 78 (117)
|||.......+.+. .....+..+.|+.|+.+|||...+... ....+|+.++++|+.++ .-.+|++|
T Consensus 88 HGGg~~~g~~~~~~-~~~~~la~~~g~~Vv~vdYrlape~~~-----------p~~~~D~~~a~~~l~~~~~~~~~d~~~ 155 (318)
T PRK10162 88 HGGGFILGNLDTHD-RIMRLLASYSGCTVIGIDYTLSPEARF-----------PQAIEEIVAVCCYFHQHAEDYGINMSR 155 (318)
T ss_pred eCCcccCCCchhhh-HHHHHHHHHcCCEEEEecCCCCCCCCC-----------CCcHHHHHHHHHHHHHhHHHhCCChhH
Confidence 77775532222222 233444434699999999997654321 12378899999998764 22358899
Q ss_pred eEEEecChHHHHHHHHHhhC-----CCCceEEEEeeCCCCCC
Q psy14549 79 VGIWGWSYGGFATAMVLATD-----TQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 79 i~i~G~S~Gg~~a~~~~~~~-----~~~~~~~~v~~~~~~~~ 115 (117)
|+|+|+|+||.+++.++.+. .+..+++++.++|+.|.
T Consensus 156 i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 156 IGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 99999999999999888642 02468899999998764
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.29 E-value=1.6e-11 Score=84.08 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=58.8
Q ss_pred hhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC
Q psy14549 22 VSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN 101 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~ 101 (117)
+..++|.|+++|+||+|.|...... ......++.+.+..+.+. ++.+++.++||||||.+++.++.++ |+
T Consensus 49 ~~~~~~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~~dl~~l~~~---l~~~~~~lvG~S~GG~ia~~~a~~~-p~ 118 (306)
T TIGR01249 49 FDPETYRIVLFDQRGCGKSTPHACL------EENTTWDLVADIEKLREK---LGIKNWLVFGGSWGSTLALAYAQTH-PE 118 (306)
T ss_pred cCccCCEEEEECCCCCCCCCCCCCc------ccCCHHHHHHHHHHHHHH---cCCCCEEEEEECHHHHHHHHHHHHC-hH
Confidence 3357899999999999988642110 011245566666665553 3446899999999999999999999 99
Q ss_pred ceEEEEeeCCC
Q psy14549 102 VFKCGVSVAPV 112 (117)
Q Consensus 102 ~~~~~v~~~~~ 112 (117)
.++++|..++.
T Consensus 119 ~v~~lvl~~~~ 129 (306)
T TIGR01249 119 VVTGLVLRGIF 129 (306)
T ss_pred hhhhheeeccc
Confidence 88888877653
No 42
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.28 E-value=1.3e-11 Score=81.12 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=56.9
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
+++|.|+++|+||+|.|...... .....+..+.+..+.+. ++..++.++|||+||.+++.++.+. |+.+
T Consensus 37 ~~~~~vi~~D~~G~G~S~~~~~~-------~~~~~~~~~~~~~~i~~---~~~~~~~l~G~S~Gg~~a~~~a~~~-~~~v 105 (257)
T TIGR03611 37 TQRFHVVTYDHRGTGRSPGELPP-------GYSIAHMADDVLQLLDA---LNIERFHFVGHALGGLIGLQLALRY-PERL 105 (257)
T ss_pred HhccEEEEEcCCCCCCCCCCCcc-------cCCHHHHHHHHHHHHHH---hCCCcEEEEEechhHHHHHHHHHHC-hHHh
Confidence 46899999999999988643210 11133333333333331 2456899999999999999999998 8889
Q ss_pred EEEEeeCCCCC
Q psy14549 104 KCGVSVAPVTN 114 (117)
Q Consensus 104 ~~~v~~~~~~~ 114 (117)
+++|.+++..+
T Consensus 106 ~~~i~~~~~~~ 116 (257)
T TIGR03611 106 LSLVLINAWSR 116 (257)
T ss_pred HHheeecCCCC
Confidence 99998887554
No 43
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.27 E-value=2.3e-11 Score=80.86 Aligned_cols=107 Identities=18% Similarity=0.252 Sum_probs=73.0
Q ss_pred CCccccccccccch----hhHhhhcCCeEEEEECCCCCCCCChhh---hHhhhh----cCC-CcchhHHHHHHHHHHHhc
Q psy14549 4 PGSNIISDRFSIDF----HTYLVSKRHVIVVHIDARGSAYRSKEQ---EHSVYR----NLG-RYEIADQIAVVKYLTERF 71 (117)
Q Consensus 4 p~~~~~~~~~~~~~----~~~~~a~~g~~vv~~d~rg~g~~~~~~---~~~~~~----~~~-~~~~~d~~~~~~~~~~~~ 71 (117)
|....+.+-|..+. ....+|++||+|++||..+........ ...... ... .....|+.+.++++.+ .
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~-~ 106 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLAR-Q 106 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHh-C
Confidence 34444444444332 235567899999999977632211111 111111 111 2347899999999998 7
Q ss_pred CCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 72 QFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 72 ~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
+..+..||+++|+||||.+++.++.+. | .+++++++.|..
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~-~-~v~a~v~fyg~~ 146 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRA-P-EVKAAVAFYGGL 146 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhccc-C-CccEEEEecCCC
Confidence 767899999999999999999998886 5 799999998854
No 44
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.27 E-value=4.4e-11 Score=83.45 Aligned_cols=88 Identities=17% Similarity=0.088 Sum_probs=66.5
Q ss_pred hhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 18 HTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 18 ~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
....++++||.|+++|++|++.+.... .+.+....++.++++++.++. ...++.++||||||.+++.++..
T Consensus 86 ~~~~L~~~G~~V~~~D~~g~g~s~~~~------~~~d~~~~~~~~~v~~l~~~~---~~~~i~lvGhS~GG~i~~~~~~~ 156 (350)
T TIGR01836 86 LVRGLLERGQDVYLIDWGYPDRADRYL------TLDDYINGYIDKCVDYICRTS---KLDQISLLGICQGGTFSLCYAAL 156 (350)
T ss_pred HHHHHHHCCCeEEEEeCCCCCHHHhcC------CHHHHHHHHHHHHHHHHHHHh---CCCcccEEEECHHHHHHHHHHHh
Confidence 345566899999999999876543211 111121345788899888742 44689999999999999999988
Q ss_pred CCCCceEEEEeeCCCCCC
Q psy14549 98 DTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 98 ~~~~~~~~~v~~~~~~~~ 115 (117)
+ |+.+++++.++++.|+
T Consensus 157 ~-~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 157 Y-PDKIKNLVTMVTPVDF 173 (350)
T ss_pred C-chheeeEEEecccccc
Confidence 8 8899999999998875
No 45
>PRK06489 hypothetical protein; Provisional
Probab=99.27 E-value=3.5e-11 Score=84.20 Aligned_cols=84 Identities=19% Similarity=0.265 Sum_probs=56.6
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHH-HHHHHHhcCCCCCCceE-EEecChHHHHHHHHHhhCCCC
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAV-VKYLTERFQFIDKTKVG-IWGWSYGGFATAMVLATDTQN 101 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~d~~~i~-i~G~S~Gg~~a~~~~~~~~~~ 101 (117)
.++|.|+++|+||+|.|...... ...........++.+. +..+.+. ++.+++. ++||||||++++.++.++ |+
T Consensus 103 ~~~~~Via~Dl~GhG~S~~p~~~-~~~~~~~~~~~~~a~~~~~~l~~~---lgi~~~~~lvG~SmGG~vAl~~A~~~-P~ 177 (360)
T PRK06489 103 ASKYFIILPDGIGHGKSSKPSDG-LRAAFPRYDYDDMVEAQYRLVTEG---LGVKHLRLILGTSMGGMHAWMWGEKY-PD 177 (360)
T ss_pred ccCCEEEEeCCCCCCCCCCCCcC-CCCCCCcccHHHHHHHHHHHHHHh---cCCCceeEEEEECHHHHHHHHHHHhC-ch
Confidence 57899999999999988542111 0000111234455533 3334342 3445775 899999999999999999 99
Q ss_pred ceEEEEeeCCC
Q psy14549 102 VFKCGVSVAPV 112 (117)
Q Consensus 102 ~~~~~v~~~~~ 112 (117)
+++++|.+++.
T Consensus 178 ~V~~LVLi~s~ 188 (360)
T PRK06489 178 FMDALMPMASQ 188 (360)
T ss_pred hhheeeeeccC
Confidence 99999987653
No 46
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.26 E-value=1.4e-11 Score=83.02 Aligned_cols=78 Identities=17% Similarity=0.186 Sum_probs=56.7
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
+++|.|+++|+||+|.|...... ....++.+.+..+.+. ++.+++.++||||||.+++.++.++ |+++
T Consensus 49 ~~~~~vi~~Dl~G~G~S~~~~~~--------~~~~~~~~~~~~~i~~---l~~~~~~LvG~S~GG~va~~~a~~~-p~~v 116 (276)
T TIGR02240 49 DPDLEVIAFDVPGVGGSSTPRHP--------YRFPGLAKLAARMLDY---LDYGQVNAIGVSWGGALAQQFAHDY-PERC 116 (276)
T ss_pred ccCceEEEECCCCCCCCCCCCCc--------CcHHHHHHHHHHHHHH---hCcCceEEEEECHHHHHHHHHHHHC-HHHh
Confidence 46899999999999998642110 1133333333333332 2446899999999999999999999 9999
Q ss_pred EEEEeeCCCC
Q psy14549 104 KCGVSVAPVT 113 (117)
Q Consensus 104 ~~~v~~~~~~ 113 (117)
+++|.+++..
T Consensus 117 ~~lvl~~~~~ 126 (276)
T TIGR02240 117 KKLILAATAA 126 (276)
T ss_pred hheEEeccCC
Confidence 9999988754
No 47
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.24 E-value=2.7e-11 Score=77.13 Aligned_cols=86 Identities=19% Similarity=0.266 Sum_probs=68.7
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+.++||.++-+|+||-|.|.+++.+. .-+..|..++++|++++.+. .....+.|+|+|+++++.++.+.
T Consensus 53 a~~l~~~G~atlRfNfRgVG~S~G~fD~G------iGE~~Da~aaldW~~~~hp~--s~~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 53 ARALVKRGFATLRFNFRGVGRSQGEFDNG------IGELEDAAAALDWLQARHPD--SASCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred HHHHHhCCceEEeecccccccccCcccCC------cchHHHHHHHHHHHHhhCCC--chhhhhcccchHHHHHHHHHHhc
Confidence 35567999999999999999998876532 24589999999999996543 23357899999999999999997
Q ss_pred CCCceEEEEeeCCCCC
Q psy14549 99 TQNVFKCGVSVAPVTN 114 (117)
Q Consensus 99 ~~~~~~~~v~~~~~~~ 114 (117)
| .....++.+|.++
T Consensus 125 -~-e~~~~is~~p~~~ 138 (210)
T COG2945 125 -P-EILVFISILPPIN 138 (210)
T ss_pred -c-cccceeeccCCCC
Confidence 5 4577777777776
No 48
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.24 E-value=6.2e-11 Score=80.59 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=60.1
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
.++|.|+++|+||+|.|..... . .....+..+.+..+.+. .+.+++.++||||||.+++.++..+ |+++
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~~~------~-~~~~~~~~~~~~~~~~~---~~~~~~~lvG~S~Gg~va~~~a~~~-p~~v 126 (286)
T PRK03204 58 RDRFRCVAPDYLGFGLSERPSG------F-GYQIDEHARVIGEFVDH---LGLDRYLSMGQDWGGPISMAVAVER-ADRV 126 (286)
T ss_pred hCCcEEEEECCCCCCCCCCCCc------c-ccCHHHHHHHHHHHHHH---hCCCCEEEEEECccHHHHHHHHHhC-hhhe
Confidence 4679999999999998864211 0 12356777777776663 3557899999999999999999998 9999
Q ss_pred EEEEeeCCC
Q psy14549 104 KCGVSVAPV 112 (117)
Q Consensus 104 ~~~v~~~~~ 112 (117)
+++|..++.
T Consensus 127 ~~lvl~~~~ 135 (286)
T PRK03204 127 RGVVLGNTW 135 (286)
T ss_pred eEEEEECcc
Confidence 999877653
No 49
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.22 E-value=2.7e-11 Score=78.98 Aligned_cols=77 Identities=19% Similarity=0.240 Sum_probs=56.2
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
++||.|+++|+||+|.+..... .....+..+.+..+.+. ++.+++.++|||+||.+++.++.++ |+.+
T Consensus 37 ~~~~~v~~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~i~~---~~~~~v~liG~S~Gg~~a~~~a~~~-p~~v 104 (251)
T TIGR02427 37 TPDFRVLRYDKRGHGLSDAPEG--------PYSIEDLADDVLALLDH---LGIERAVFCGLSLGGLIAQGLAARR-PDRV 104 (251)
T ss_pred hcccEEEEecCCCCCCCCCCCC--------CCCHHHHHHHHHHHHHH---hCCCceEEEEeCchHHHHHHHHHHC-HHHh
Confidence 5799999999999998743211 11244444444444342 2456899999999999999999998 8999
Q ss_pred EEEEeeCCC
Q psy14549 104 KCGVSVAPV 112 (117)
Q Consensus 104 ~~~v~~~~~ 112 (117)
++++.+++.
T Consensus 105 ~~li~~~~~ 113 (251)
T TIGR02427 105 RALVLSNTA 113 (251)
T ss_pred HHHhhccCc
Confidence 888877754
No 50
>KOG4178|consensus
Probab=99.22 E-value=1e-10 Score=79.86 Aligned_cols=85 Identities=15% Similarity=0.124 Sum_probs=62.1
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..++.+||.|+++|.||+|.|........ .....+...+..+.++.+ .+|+.++||+||+.+++.++..+
T Consensus 65 ~~la~~~~rviA~DlrGyG~Sd~P~~~~~------Yt~~~l~~di~~lld~Lg---~~k~~lvgHDwGaivaw~la~~~- 134 (322)
T KOG4178|consen 65 PGLASRGYRVIAPDLRGYGFSDAPPHISE------YTIDELVGDIVALLDHLG---LKKAFLVGHDWGAIVAWRLALFY- 134 (322)
T ss_pred hhhhhcceEEEecCCCCCCCCCCCCCcce------eeHHHHHHHHHHHHHHhc---cceeEEEeccchhHHHHHHHHhC-
Confidence 45678999999999999998865332111 223333333333333332 47999999999999999999999
Q ss_pred CCceEEEEeeCCCCC
Q psy14549 100 QNVFKCGVSVAPVTN 114 (117)
Q Consensus 100 ~~~~~~~v~~~~~~~ 114 (117)
|+++++.|.++.+..
T Consensus 135 Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 135 PERVDGLVTLNVPFP 149 (322)
T ss_pred hhhcceEEEecCCCC
Confidence 999999999886553
No 51
>PLN02578 hydrolase
Probab=99.22 E-value=4.2e-11 Score=83.65 Aligned_cols=78 Identities=17% Similarity=0.086 Sum_probs=55.1
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
.++|.|+++|+||+|.|.......... ...+|+.+.++ + +..+++.++|||+||.+++.++.++ |+++
T Consensus 110 ~~~~~v~~~D~~G~G~S~~~~~~~~~~----~~a~~l~~~i~---~----~~~~~~~lvG~S~Gg~ia~~~A~~~-p~~v 177 (354)
T PLN02578 110 AKKYKVYALDLLGFGWSDKALIEYDAM----VWRDQVADFVK---E----VVKEPAVLVGNSLGGFTALSTAVGY-PELV 177 (354)
T ss_pred hcCCEEEEECCCCCCCCCCcccccCHH----HHHHHHHHHHH---H----hccCCeEEEEECHHHHHHHHHHHhC-hHhc
Confidence 457999999999999886542211110 01233333333 3 1346899999999999999999999 9999
Q ss_pred EEEEeeCCCC
Q psy14549 104 KCGVSVAPVT 113 (117)
Q Consensus 104 ~~~v~~~~~~ 113 (117)
++++.+++..
T Consensus 178 ~~lvLv~~~~ 187 (354)
T PLN02578 178 AGVALLNSAG 187 (354)
T ss_pred ceEEEECCCc
Confidence 9999877643
No 52
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.22 E-value=5.1e-12 Score=91.60 Aligned_cols=110 Identities=25% Similarity=0.316 Sum_probs=94.7
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
|||...+. ...|+... ....++|-+.+..|.||-|+.+..|+....+.-....++|+.++.+.|.+ ++...+++++
T Consensus 428 YGGF~vsl-tP~fs~~~--~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~-rgitspe~lg 503 (648)
T COG1505 428 YGGFNISL-TPRFSGSR--KLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIK-RGITSPEKLG 503 (648)
T ss_pred cccccccc-CCccchhh--HHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHH-hCCCCHHHhh
Confidence 78877765 45566544 44558999999999999999999999887765545568999999999999 7878999999
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~ 115 (117)
|.|.|.||.++...+.+. |++|.++++..|+.|-
T Consensus 504 i~GgSNGGLLvg~alTQr-PelfgA~v~evPllDM 537 (648)
T COG1505 504 IQGGSNGGLLVGAALTQR-PELFGAAVCEVPLLDM 537 (648)
T ss_pred hccCCCCceEEEeeeccC-hhhhCceeeccchhhh
Confidence 999999999999999999 9999999999999874
No 53
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.21 E-value=7.1e-11 Score=83.77 Aligned_cols=88 Identities=15% Similarity=0.097 Sum_probs=63.3
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...++++||.|+++|+||+|.|....... ..+ .....|+.++++++.... +..+++++||||||.+++.++. +
T Consensus 156 a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~--~~~-~~~~~Dl~~~l~~l~~~~---~~~~i~lvGhSmGG~ial~~a~-~ 228 (395)
T PLN02652 156 AKQLTSCGFGVYAMDWIGHGGSDGLHGYV--PSL-DYVVEDTEAFLEKIRSEN---PGVPCFLFGHSTGGAVVLKAAS-Y 228 (395)
T ss_pred HHHHHHCCCEEEEeCCCCCCCCCCCCCCC--cCH-HHHHHHHHHHHHHHHHhC---CCCCEEEEEECHHHHHHHHHHh-c
Confidence 34456789999999999999886532100 000 122678888888887632 2347999999999999998764 4
Q ss_pred CCC---ceEEEEeeCCCCC
Q psy14549 99 TQN---VFKCGVSVAPVTN 114 (117)
Q Consensus 99 ~~~---~~~~~v~~~~~~~ 114 (117)
|+ .++++|..+|..+
T Consensus 229 -p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 229 -PSIEDKLEGIVLTSPALR 246 (395)
T ss_pred -cCcccccceEEEECcccc
Confidence 54 7899999988654
No 54
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.21 E-value=3.2e-11 Score=87.41 Aligned_cols=108 Identities=23% Similarity=0.226 Sum_probs=72.2
Q ss_pred CCCCCccccccccccchhhHhhhcCC-eEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh--cCCCCC
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRH-VIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER--FQFIDK 76 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g-~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~d~ 76 (117)
|||+...-....+ ....++++.+ ++|+.+||| |..+...........+ ....|+..+++|++++ .-..|+
T Consensus 102 hGG~~~~g~~~~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n---~g~~D~~~al~wv~~~i~~fggd~ 175 (493)
T cd00312 102 HGGGFMFGSGSLY---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGN---YGLKDQRLALKWVQDNIAAFGGDP 175 (493)
T ss_pred cCCccccCCCCCC---ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcc---hhHHHHHHHHHHHHHHHHHhCCCc
Confidence 7887664333222 2234443444 999999999 5543322111111222 3378999999999986 223599
Q ss_pred CceEEEecChHHHHHHHHHhhC-CCCceEEEEeeCCCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATD-TQNVFKCGVSVAPVTN 114 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~-~~~~~~~~v~~~~~~~ 114 (117)
++|.|+|+|.||.++..++... .+.+|+++|+.+|...
T Consensus 176 ~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 176 DSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred ceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 9999999999999999888763 0347999999987543
No 55
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.19 E-value=1.9e-10 Score=76.26 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=53.4
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
.++|.|+.+|.||+|.|..... .... ..++|+.++++.+ ...++.++||||||.+++.++.+. |+++
T Consensus 40 ~~~~~vi~~D~~G~G~s~~~~~-~~~~----~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~-~~~v 106 (255)
T PRK10673 40 VNDHDIIQVDMRNHGLSPRDPV-MNYP----AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALA-PDRI 106 (255)
T ss_pred hhCCeEEEECCCCCCCCCCCCC-CCHH----HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhC-Hhhc
Confidence 4689999999999998764211 0000 1134444444432 335799999999999999999998 9999
Q ss_pred EEEEeeC
Q psy14549 104 KCGVSVA 110 (117)
Q Consensus 104 ~~~v~~~ 110 (117)
++++.++
T Consensus 107 ~~lvli~ 113 (255)
T PRK10673 107 DKLVAID 113 (255)
T ss_pred ceEEEEe
Confidence 9988864
No 56
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.19 E-value=2.3e-10 Score=77.49 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=57.2
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHH-HHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQI-AVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
...+.++||.|+++|+||+|.+...... . ...++.. .+++.+.+ .. ...++.++||||||.++..++..
T Consensus 38 ~~~L~~~g~~vi~~dl~g~G~s~~~~~~--~-----~~~~~~~~~l~~~i~~-l~--~~~~v~lvGhS~GG~v~~~~a~~ 107 (273)
T PLN02211 38 RCLMENSGYKVTCIDLKSAGIDQSDADS--V-----TTFDEYNKPLIDFLSS-LP--ENEKVILVGHSAGGLSVTQAIHR 107 (273)
T ss_pred HHHHHhCCCEEEEecccCCCCCCCCccc--C-----CCHHHHHHHHHHHHHh-cC--CCCCEEEEEECchHHHHHHHHHh
Confidence 4456568999999999999876432110 0 1133333 33333333 22 23689999999999999999988
Q ss_pred CCCCceEEEEeeCCC
Q psy14549 98 DTQNVFKCGVSVAPV 112 (117)
Q Consensus 98 ~~~~~~~~~v~~~~~ 112 (117)
+ |++++++|.+++.
T Consensus 108 ~-p~~v~~lv~~~~~ 121 (273)
T PLN02211 108 F-PKKICLAVYVAAT 121 (273)
T ss_pred C-hhheeEEEEeccc
Confidence 8 9999999988663
No 57
>PLN00021 chlorophyllase
Probab=99.19 E-value=2.7e-10 Score=78.55 Aligned_cols=84 Identities=23% Similarity=0.223 Sum_probs=59.7
Q ss_pred hhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhc-------CCCCCCceEEEecChHHHH
Q psy14549 18 HTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERF-------QFIDKTKVGIWGWSYGGFA 90 (117)
Q Consensus 18 ~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~~d~~~i~i~G~S~Gg~~ 90 (117)
....++++||+|+++|+++...... ..+..+..++++|+.+.. ...|.+|++++|||+||.+
T Consensus 71 l~~~Las~G~~VvapD~~g~~~~~~-----------~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~i 139 (313)
T PLN00021 71 LLQHIASHGFIVVAPQLYTLAGPDG-----------TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKT 139 (313)
T ss_pred HHHHHHhCCCEEEEecCCCcCCCCc-----------hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHH
Confidence 3345678899999999998532211 012455666667766421 2357789999999999999
Q ss_pred HHHHHhhCCCC-----ceEEEEeeCCCC
Q psy14549 91 TAMVLATDTQN-----VFKCGVSVAPVT 113 (117)
Q Consensus 91 a~~~~~~~~~~-----~~~~~v~~~~~~ 113 (117)
++.++... ++ .+++++.+.|+.
T Consensus 140 A~~lA~~~-~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 140 AFALALGK-AAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred HHHHHhhc-cccccccceeeEEeecccc
Confidence 99999887 64 578888888764
No 58
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.19 E-value=1.7e-10 Score=77.02 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=56.3
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
+++|.|+++|+||+|.|...... .....+..+.+..+.+.. +.+++.++||||||.+++.++.+. |+++
T Consensus 52 ~~~~~vi~~D~~G~G~S~~~~~~-------~~~~~~~~~~l~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~-p~~v 120 (278)
T TIGR03056 52 ARSFRVVAPDLPGHGFTRAPFRF-------RFTLPSMAEDLSALCAAE---GLSPDGVIGHSAGAAIALRLALDG-PVTP 120 (278)
T ss_pred hhCcEEEeecCCCCCCCCCcccc-------CCCHHHHHHHHHHHHHHc---CCCCceEEEECccHHHHHHHHHhC-Cccc
Confidence 45799999999999987543210 112344444444444422 335789999999999999999999 9888
Q ss_pred EEEEeeCCCC
Q psy14549 104 KCGVSVAPVT 113 (117)
Q Consensus 104 ~~~v~~~~~~ 113 (117)
++++.+++..
T Consensus 121 ~~~v~~~~~~ 130 (278)
T TIGR03056 121 RMVVGINAAL 130 (278)
T ss_pred ceEEEEcCcc
Confidence 8888877643
No 59
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.18 E-value=1.3e-10 Score=84.07 Aligned_cols=79 Identities=18% Similarity=0.227 Sum_probs=57.7
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHH-HHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCc
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVV-KYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNV 102 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~ 102 (117)
+++|.|+++|+||+|.|..... . ....++..+.+ +.+.+. .+..++.++||||||.+++.++.++ |++
T Consensus 230 ~~~yrVia~Dl~G~G~S~~p~~-~------~ytl~~~a~~l~~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~-Pe~ 298 (481)
T PLN03087 230 KSTYRLFAVDLLGFGRSPKPAD-S------LYTLREHLEMIERSVLER---YKVKSFHIVAHSLGCILALALAVKH-PGA 298 (481)
T ss_pred hCCCEEEEECCCCCCCCcCCCC-C------cCCHHHHHHHHHHHHHHH---cCCCCEEEEEECHHHHHHHHHHHhC-hHh
Confidence 4799999999999998864311 0 11234444444 233342 3456899999999999999999999 999
Q ss_pred eEEEEeeCCCC
Q psy14549 103 FKCGVSVAPVT 113 (117)
Q Consensus 103 ~~~~v~~~~~~ 113 (117)
++++|.+++..
T Consensus 299 V~~LVLi~~~~ 309 (481)
T PLN03087 299 VKSLTLLAPPY 309 (481)
T ss_pred ccEEEEECCCc
Confidence 99999988643
No 60
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.17 E-value=1.8e-10 Score=76.67 Aligned_cols=71 Identities=21% Similarity=0.273 Sum_probs=52.8
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
++.|.|+++|+||+|.|.... .....++ ++.+.+ . ..+++.++||||||.+++.++.++ |+++
T Consensus 37 ~~~~~vi~~Dl~G~G~S~~~~---------~~~~~~~---~~~l~~-~---~~~~~~lvGhS~Gg~ia~~~a~~~-p~~v 99 (256)
T PRK10349 37 SSHFTLHLVDLPGFGRSRGFG---------ALSLADM---AEAVLQ-Q---APDKAIWLGWSLGGLVASQIALTH-PERV 99 (256)
T ss_pred hcCCEEEEecCCCCCCCCCCC---------CCCHHHH---HHHHHh-c---CCCCeEEEEECHHHHHHHHHHHhC-hHhh
Confidence 456999999999999885311 0113333 333334 2 346899999999999999999998 9999
Q ss_pred EEEEeeCC
Q psy14549 104 KCGVSVAP 111 (117)
Q Consensus 104 ~~~v~~~~ 111 (117)
+++|.+++
T Consensus 100 ~~lili~~ 107 (256)
T PRK10349 100 QALVTVAS 107 (256)
T ss_pred heEEEecC
Confidence 99988765
No 61
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.17 E-value=1.7e-10 Score=75.09 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=55.5
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..+ .++|.|+++|+||+|.+.... ..++...++.+.+ . ..+++.++|||+||.+++.++.++
T Consensus 25 ~~l-~~~~~vi~~d~~G~G~s~~~~------------~~~~~~~~~~~~~-~---~~~~~~lvG~S~Gg~~a~~~a~~~- 86 (245)
T TIGR01738 25 EEL-SAHFTLHLVDLPGHGRSRGFG------------PLSLADAAEAIAA-Q---APDPAIWLGWSLGGLVALHIAATH- 86 (245)
T ss_pred Hhh-ccCeEEEEecCCcCccCCCCC------------CcCHHHHHHHHHH-h---CCCCeEEEEEcHHHHHHHHHHHHC-
Confidence 344 467999999999999875320 1223344444444 2 236899999999999999999999
Q ss_pred CCceEEEEeeCCCC
Q psy14549 100 QNVFKCGVSVAPVT 113 (117)
Q Consensus 100 ~~~~~~~v~~~~~~ 113 (117)
|++++++|.+++..
T Consensus 87 p~~v~~~il~~~~~ 100 (245)
T TIGR01738 87 PDRVRALVTVASSP 100 (245)
T ss_pred HHhhheeeEecCCc
Confidence 99899998876643
No 62
>PRK07581 hypothetical protein; Validated
Probab=99.17 E-value=9.7e-11 Score=81.20 Aligned_cols=88 Identities=14% Similarity=0.151 Sum_probs=58.2
Q ss_pred hhhcCCeEEEEECCCCCCCCChhhhH---hhhhcCCCc-chhHHHHHHHHHHHhcCCCCCCce-EEEecChHHHHHHHHH
Q psy14549 21 LVSKRHVIVVHIDARGSAYRSKEQEH---SVYRNLGRY-EIADQIAVVKYLTERFQFIDKTKV-GIWGWSYGGFATAMVL 95 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~~~~~~---~~~~~~~~~-~~~d~~~~~~~~~~~~~~~d~~~i-~i~G~S~Gg~~a~~~~ 95 (117)
.+++.+|.||++|.||+|.|...... .....+... ..+|+.+....+.+. +..+++ .++||||||++++.++
T Consensus 66 ~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a 142 (339)
T PRK07581 66 ALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWA 142 (339)
T ss_pred ccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHH
Confidence 34457899999999999988643211 000111001 124444433434442 344684 7899999999999999
Q ss_pred hhCCCCceEEEEeeCCC
Q psy14549 96 ATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 96 ~~~~~~~~~~~v~~~~~ 112 (117)
.++ |++++.+|.+++.
T Consensus 143 ~~~-P~~V~~Lvli~~~ 158 (339)
T PRK07581 143 VRY-PDMVERAAPIAGT 158 (339)
T ss_pred HHC-HHHHhhheeeecC
Confidence 999 9999998888654
No 63
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.17 E-value=8.3e-11 Score=76.97 Aligned_cols=90 Identities=24% Similarity=0.309 Sum_probs=61.1
Q ss_pred hHhhhcCCeEEEEECCCCCCC---CChhhhHhhhhcC----CCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDARGSAY---RSKEQEHSVYRNL----GRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFAT 91 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~---~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a 91 (117)
...++++||.|++||+.+... ............+ ......|+.++++++++ .+..+..||+++|+|+||.++
T Consensus 34 ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~-~~~~~~~kig~vGfc~GG~~a 112 (218)
T PF01738_consen 34 ADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA-QPEVDPGKIGVVGFCWGGKLA 112 (218)
T ss_dssp HHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC-TTTCEEEEEEEEEETHHHHHH
T ss_pred HHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-ccccCCCcEEEEEEecchHHh
Confidence 345568999999999775433 1111111111111 11235777889999988 676788999999999999999
Q ss_pred HHHHhhCCCCceEEEEeeCC
Q psy14549 92 AMVLATDTQNVFKCGVSVAP 111 (117)
Q Consensus 92 ~~~~~~~~~~~~~~~v~~~~ 111 (117)
+.++... +.++++|++.|
T Consensus 113 ~~~a~~~--~~~~a~v~~yg 130 (218)
T PF01738_consen 113 LLLAARD--PRVDAAVSFYG 130 (218)
T ss_dssp HHHHCCT--TTSSEEEEES-
T ss_pred hhhhhhc--cccceEEEEcC
Confidence 9988765 57899999988
No 64
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.17 E-value=3.2e-10 Score=74.67 Aligned_cols=76 Identities=12% Similarity=0.007 Sum_probs=53.8
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCc-e
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNV-F 103 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~-~ 103 (117)
++|.|+++|+||+|.|...... ...+....+..+.+. .+.+++.++||||||.+++.++.++ |+. +
T Consensus 26 ~~~~vi~~D~~G~G~S~~~~~~---------~~~~~~~~l~~~l~~---~~~~~~~lvG~S~Gg~va~~~a~~~-~~~~v 92 (242)
T PRK11126 26 PDYPRLYIDLPGHGGSAAISVD---------GFADVSRLLSQTLQS---YNILPYWLVGYSLGGRIAMYYACQG-LAGGL 92 (242)
T ss_pred CCCCEEEecCCCCCCCCCcccc---------CHHHHHHHHHHHHHH---cCCCCeEEEEECHHHHHHHHHHHhC-Ccccc
Confidence 4799999999999998643211 133333333333332 2457999999999999999999998 664 9
Q ss_pred EEEEeeCCCC
Q psy14549 104 KCGVSVAPVT 113 (117)
Q Consensus 104 ~~~v~~~~~~ 113 (117)
++++..++..
T Consensus 93 ~~lvl~~~~~ 102 (242)
T PRK11126 93 CGLIVEGGNP 102 (242)
T ss_pred cEEEEeCCCC
Confidence 9988877543
No 65
>KOG1552|consensus
Probab=99.16 E-value=1e-10 Score=77.53 Aligned_cols=79 Identities=23% Similarity=0.227 Sum_probs=69.0
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceE
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFK 104 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~ 104 (117)
.++.|+..||+|+|.|.+.+.+.. ...|+.++.+|++++.+ .+++|.++|+|+|...++.++.+. | .+
T Consensus 87 ln~nv~~~DYSGyG~S~G~psE~n-------~y~Di~avye~Lr~~~g--~~~~Iil~G~SiGt~~tv~Lasr~-~--~~ 154 (258)
T KOG1552|consen 87 LNCNVVSYDYSGYGRSSGKPSERN-------LYADIKAVYEWLRNRYG--SPERIILYGQSIGTVPTVDLASRY-P--LA 154 (258)
T ss_pred ccceEEEEecccccccCCCccccc-------chhhHHHHHHHHHhhcC--CCceEEEEEecCCchhhhhHhhcC-C--cc
Confidence 599999999999999988765542 27899999999999544 789999999999999999999998 6 89
Q ss_pred EEEeeCCCCCC
Q psy14549 105 CGVSVAPVTNF 115 (117)
Q Consensus 105 ~~v~~~~~~~~ 115 (117)
++|..+|+.+.
T Consensus 155 alVL~SPf~S~ 165 (258)
T KOG1552|consen 155 AVVLHSPFTSG 165 (258)
T ss_pred eEEEeccchhh
Confidence 99999998764
No 66
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.16 E-value=9.1e-11 Score=81.46 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=61.3
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhh-hcCCCcchhHHHHHHHHHHHhc-----------------CCCCCCceE
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVY-RNLGRYEIADQIAVVKYLTERF-----------------QFIDKTKVG 80 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-----------------~~~d~~~i~ 80 (117)
...+.++||.|+++|+||+|.|......... ..+. .-++|+...++.+++.. ..-+..+++
T Consensus 67 ~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~-~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 67 IENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFD-DLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHCCCcEEEecccccCCCccccccccchhhHH-HHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 4556689999999999999987643111100 1111 12567777777665410 000134799
Q ss_pred EEecChHHHHHHHHHhhCCCC--------ceEEEEeeCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQN--------VFKCGVSVAPVT 113 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~--------~~~~~v~~~~~~ 113 (117)
++||||||.+++.++... ++ .++++|..+|+.
T Consensus 146 l~GhSmGg~i~~~~~~~~-~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELL-GKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred EeeccCccHHHHHHHHHh-ccccccccccccceEEEeccce
Confidence 999999999999987654 32 588888888864
No 67
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.15 E-value=5.2e-10 Score=75.91 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=62.2
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..++.+.+|.|+++|+++...... .... .+. .....++...++.+.+ ...++.+++.++|||+||.++..++.+.
T Consensus 59 ~~ll~~~~~nVi~vD~~~~~~~~y--~~a~-~~~-~~v~~~la~~l~~L~~-~~g~~~~~i~lIGhSlGa~vAg~~a~~~ 133 (275)
T cd00707 59 KAYLSRGDYNVIVVDWGRGANPNY--PQAV-NNT-RVVGAELAKFLDFLVD-NTGLSLENVHLIGHSLGAHVAGFAGKRL 133 (275)
T ss_pred HHHHhcCCCEEEEEECccccccCh--HHHH-HhH-HHHHHHHHHHHHHHHH-hcCCChHHEEEEEecHHHHHHHHHHHHh
Confidence 334545789999999998633221 1111 111 0114667788888877 3335778999999999999999999998
Q ss_pred CCCceEEEEeeCCC
Q psy14549 99 TQNVFKCGVSVAPV 112 (117)
Q Consensus 99 ~~~~~~~~v~~~~~ 112 (117)
|++++.++.+.|.
T Consensus 134 -~~~v~~iv~LDPa 146 (275)
T cd00707 134 -NGKLGRITGLDPA 146 (275)
T ss_pred -cCccceeEEecCC
Confidence 8889999988764
No 68
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.15 E-value=2.2e-10 Score=79.74 Aligned_cols=76 Identities=16% Similarity=0.205 Sum_probs=53.3
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCc-eEEEecChHHHHHHHHHhhCCCCc
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTK-VGIWGWSYGGFATAMVLATDTQNV 102 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~-i~i~G~S~Gg~~a~~~~~~~~~~~ 102 (117)
.++|.|+++|.||+|.+.... ....+....+..+.+. ++.++ +.++||||||++++.++.++ |++
T Consensus 97 ~~~~~Vi~~Dl~G~g~s~~~~----------~~~~~~a~dl~~ll~~---l~l~~~~~lvG~SmGG~vA~~~A~~~-P~~ 162 (343)
T PRK08775 97 PARFRLLAFDFIGADGSLDVP----------IDTADQADAIALLLDA---LGIARLHAFVGYSYGALVGLQFASRH-PAR 162 (343)
T ss_pred ccccEEEEEeCCCCCCCCCCC----------CCHHHHHHHHHHHHHH---cCCCcceEEEEECHHHHHHHHHHHHC-hHh
Confidence 468999999999987663210 1123333333333332 23345 47999999999999999999 999
Q ss_pred eEEEEeeCCCC
Q psy14549 103 FKCGVSVAPVT 113 (117)
Q Consensus 103 ~~~~v~~~~~~ 113 (117)
++.+|.+++..
T Consensus 163 V~~LvLi~s~~ 173 (343)
T PRK08775 163 VRTLVVVSGAH 173 (343)
T ss_pred hheEEEECccc
Confidence 99999888653
No 69
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.13 E-value=3.4e-10 Score=77.79 Aligned_cols=103 Identities=18% Similarity=0.183 Sum_probs=76.7
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhc--CCCCCCc
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERF--QFIDKTK 78 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~d~~~ 78 (117)
|||-...... +..-.....+++..|+.|+.+|||...+..- ....+|+.++++|+.++. -.+|+++
T Consensus 86 HGGg~~~g~~-~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-----------p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 86 HGGGWVLGSL-RTHDALVARLAAAAGAVVVSVDYRLAPEHPF-----------PAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred eCCeeeecCh-hhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-----------CchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 6776664322 2222345666778999999999998765422 123788999999998752 2468999
Q ss_pred eEEEecChHHHHHHHHHhhCCCC----ceEEEEeeCCCCCCC
Q psy14549 79 VGIWGWSYGGFATAMVLATDTQN----VFKCGVSVAPVTNFL 116 (117)
Q Consensus 79 i~i~G~S~Gg~~a~~~~~~~~~~----~~~~~v~~~~~~~~~ 116 (117)
|+++|+|.||.+++.++..- .+ .....+.++|..|..
T Consensus 154 i~v~GdSAGG~La~~~a~~~-~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 154 IAVAGDSAGGHLALALALAA-RDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred eEEEecCcccHHHHHHHHHH-HhcCCCCceEEEEEecccCCc
Confidence 99999999999999888775 32 578899999988764
No 70
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.13 E-value=2.8e-10 Score=83.54 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=86.6
Q ss_pred ccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHH
Q psy14549 10 SDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGF 89 (117)
Q Consensus 10 ~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~ 89 (117)
...|+.. ...+..+||+..+..-||-++-+..|-+..+..-....+.|++++.++|.+ .+..++++|+++|.|.||+
T Consensus 463 ~p~Fs~~--~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~-~g~~~~~~i~a~GGSAGGm 539 (682)
T COG1770 463 DPSFSIA--RLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVK-EGYTSPDRIVAIGGSAGGM 539 (682)
T ss_pred CcCcccc--eeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHH-cCcCCccceEEeccCchhH
Confidence 4445532 233558999999999999999998887776654444558999999999999 7888999999999999999
Q ss_pred HHHHHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 90 ATAMVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 90 ~a~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
++..++-.. |++|+++|+..|++|..
T Consensus 540 LmGav~N~~-P~lf~~iiA~VPFVDvl 565 (682)
T COG1770 540 LMGAVANMA-PDLFAGIIAQVPFVDVL 565 (682)
T ss_pred HHHHHHhhC-hhhhhheeecCCccchh
Confidence 999999999 99999999999999864
No 71
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.12 E-value=3e-10 Score=80.72 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=54.2
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcch-hHHH-HHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCc
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEI-ADQI-AVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNV 102 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~-~d~~-~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~ 102 (117)
++|.|+++|+||+|.|...... .... ... ..+. .+.+++.. ++.+++.++||||||++++.++.++ |+.
T Consensus 130 ~~~~vi~~D~rG~G~S~~~~~~--~~~~--~~~~~~~~~~i~~~~~~----l~~~~~~lvGhS~GG~la~~~a~~~-p~~ 200 (402)
T PLN02894 130 SRFRVIAIDQLGWGGSSRPDFT--CKST--EETEAWFIDSFEEWRKA----KNLSNFILLGHSFGGYVAAKYALKH-PEH 200 (402)
T ss_pred hCCEEEEECCCCCCCCCCCCcc--cccH--HHHHHHHHHHHHHHHHH----cCCCCeEEEEECHHHHHHHHHHHhC-chh
Confidence 4699999999999988542110 0000 001 1122 22333333 3556899999999999999999999 999
Q ss_pred eEEEEeeCCC
Q psy14549 103 FKCGVSVAPV 112 (117)
Q Consensus 103 ~~~~v~~~~~ 112 (117)
++++|.++|.
T Consensus 201 v~~lvl~~p~ 210 (402)
T PLN02894 201 VQHLILVGPA 210 (402)
T ss_pred hcEEEEECCc
Confidence 9999888764
No 72
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.12 E-value=4.4e-10 Score=78.77 Aligned_cols=78 Identities=15% Similarity=0.188 Sum_probs=53.2
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh-hCCCCc
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA-TDTQNV 102 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~-~~~~~~ 102 (117)
+++|.|+++|+||+|.|...... .....+..+.+..+.+. +..+++.++|||+||.+++.++. .+ |++
T Consensus 112 ~~~~~via~Dl~G~G~S~~~~~~-------~~~~~~~a~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~~-P~r 180 (360)
T PLN02679 112 AKNYTVYAIDLLGFGASDKPPGF-------SYTMETWAELILDFLEE---VVQKPTVLIGNSVGSLACVIAASEST-RDL 180 (360)
T ss_pred hcCCEEEEECCCCCCCCCCCCCc-------cccHHHHHHHHHHHHHH---hcCCCeEEEEECHHHHHHHHHHHhcC-hhh
Confidence 45899999999999998643110 01123333332222221 24468999999999999998876 46 889
Q ss_pred eEEEEeeCCC
Q psy14549 103 FKCGVSVAPV 112 (117)
Q Consensus 103 ~~~~v~~~~~ 112 (117)
++++|.+++.
T Consensus 181 V~~LVLi~~~ 190 (360)
T PLN02679 181 VRGLVLLNCA 190 (360)
T ss_pred cCEEEEECCc
Confidence 9999988764
No 73
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.11 E-value=4.1e-10 Score=78.56 Aligned_cols=88 Identities=15% Similarity=0.145 Sum_probs=59.5
Q ss_pred hhcCCeEEEEECCCC--CCCCChhhh-Hhhh---hcCCCcchhHHHHHHHHHHHhcCCCCCCc-eEEEecChHHHHHHHH
Q psy14549 22 VSKRHVIVVHIDARG--SAYRSKEQE-HSVY---RNLGRYEIADQIAVVKYLTERFQFIDKTK-VGIWGWSYGGFATAMV 94 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg--~g~~~~~~~-~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~d~~~-i~i~G~S~Gg~~a~~~ 94 (117)
+.+++|.|+++|+|| +|.+..+.. .... .+.......|..+.+..+.+. +..++ +.++||||||.+++.+
T Consensus 68 l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~l~G~S~Gg~ia~~~ 144 (351)
T TIGR01392 68 IDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH---LGIEQIAAVVGGSMGGMQALEW 144 (351)
T ss_pred cCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH---cCCCCceEEEEECHHHHHHHHH
Confidence 336899999999999 443332111 0000 011123356666666555553 34467 9999999999999999
Q ss_pred HhhCCCCceEEEEeeCCCC
Q psy14549 95 LATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 95 ~~~~~~~~~~~~v~~~~~~ 113 (117)
+.++ |++++.+|.+++..
T Consensus 145 a~~~-p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 145 AIDY-PERVRAIVVLATSA 162 (351)
T ss_pred HHHC-hHhhheEEEEccCC
Confidence 9999 99999999888654
No 74
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.09 E-value=6.8e-11 Score=85.98 Aligned_cols=87 Identities=23% Similarity=0.348 Sum_probs=60.2
Q ss_pred hHhhhcCCeEEEEECCCC-C---CCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh---cCCCCCCceEEEecChHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDARG-S---AYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER---FQFIDKTKVGIWGWSYGGFAT 91 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg-~---g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~d~~~i~i~G~S~Gg~~a 91 (117)
..++++++++||++|||- . -........ ..+ ....|+..+|+|++++ .+ -|+++|.|+|+|.||..+
T Consensus 149 ~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN---~Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SAGa~sv 222 (535)
T PF00135_consen 149 ASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGN---YGLLDQRLALKWVQDNIAAFG-GDPDNVTLFGQSAGAASV 222 (535)
T ss_dssp HHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BST---HHHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHH
T ss_pred cccccCCCEEEEEecccccccccccccccccC--chh---hhhhhhHHHHHHHHhhhhhcc-cCCcceeeeeeccccccc
Confidence 455678999999999993 1 111111111 133 3489999999999998 33 399999999999999999
Q ss_pred HHHHhhC-CCCceEEEEeeCC
Q psy14549 92 AMVLATD-TQNVFKCGVSVAP 111 (117)
Q Consensus 92 ~~~~~~~-~~~~~~~~v~~~~ 111 (117)
..++... ...+|+.+|+.||
T Consensus 223 ~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 223 SLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHGGGGTTSBSEEEEES-
T ss_pred ceeeecccccccccccccccc
Confidence 8887764 1358999999998
No 75
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.08 E-value=6.6e-10 Score=75.03 Aligned_cols=92 Identities=20% Similarity=0.114 Sum_probs=67.6
Q ss_pred hHhhhcCCeEEEEECCC-CCCC---CChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDAR-GSAY---RSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~r-g~g~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~ 94 (117)
..+++++||.|+.||.- ...+ .+..+. ......+..++..+.+.+..+.. ...+|++||.|.|.|.||.|+..+
T Consensus 84 d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~-p~~~~~g~ddVgflr~lva~l~~-~~gidp~RVyvtGlS~GG~Ma~~l 161 (312)
T COG3509 84 DALADREGFLVAYPDGYDRAWNANGCGNWFG-PADRRRGVDDVGFLRALVAKLVN-EYGIDPARVYVTGLSNGGRMANRL 161 (312)
T ss_pred hhhhcccCcEEECcCccccccCCCcccccCC-cccccCCccHHHHHHHHHHHHHH-hcCcCcceEEEEeeCcHHHHHHHH
Confidence 45677899999999744 3221 111111 11112223457778888888888 566899999999999999999999
Q ss_pred HhhCCCCceEEEEeeCCCC
Q psy14549 95 LATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 95 ~~~~~~~~~~~~v~~~~~~ 113 (117)
++.+ |++|.++..++++.
T Consensus 162 ac~~-p~~faa~A~VAg~~ 179 (312)
T COG3509 162 ACEY-PDIFAAIAPVAGLL 179 (312)
T ss_pred HhcC-cccccceeeeeccc
Confidence 9999 99999999888764
No 76
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.07 E-value=1.3e-09 Score=75.96 Aligned_cols=77 Identities=18% Similarity=0.179 Sum_probs=57.8
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
.++|.|+++|+||+|.+..... .....++...+..+.+. ++..++.++|||+||.+++.++.++ |+.+
T Consensus 155 ~~~~~v~~~d~~g~G~s~~~~~--------~~~~~~~~~~~~~~~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~-~~~v 222 (371)
T PRK14875 155 AAGRPVIALDLPGHGASSKAVG--------AGSLDELAAAVLAFLDA---LGIERAHLVGHSMGGAVALRLAARA-PQRV 222 (371)
T ss_pred hcCCEEEEEcCCCCCCCCCCCC--------CCCHHHHHHHHHHHHHh---cCCccEEEEeechHHHHHHHHHHhC-chhe
Confidence 3569999999999998743211 11244555555554442 4557899999999999999999998 8899
Q ss_pred EEEEeeCCC
Q psy14549 104 KCGVSVAPV 112 (117)
Q Consensus 104 ~~~v~~~~~ 112 (117)
++++.++|.
T Consensus 223 ~~lv~~~~~ 231 (371)
T PRK14875 223 ASLTLIAPA 231 (371)
T ss_pred eEEEEECcC
Confidence 999988875
No 77
>KOG2237|consensus
Probab=99.05 E-value=2.2e-10 Score=83.77 Aligned_cols=110 Identities=19% Similarity=0.294 Sum_probs=88.8
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
|||-+.+ +...|...- ..+..+|++.+..|-||-|+.+..|......--..-.++|+++..+||.+ .+...++|.+
T Consensus 477 YGay~is-l~p~f~~sr--l~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve-~gyt~~~kL~ 552 (712)
T KOG2237|consen 477 YGAYGIS-LDPSFRASR--LSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVE-NGYTQPSKLA 552 (712)
T ss_pred eccccee-eccccccce--eEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHH-cCCCCcccee
Confidence 5665554 456666543 33456999999999999999888887655432222348999999999999 8888999999
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~ 115 (117)
+.|.|.||.++..+.-+. |++|+|+++-.|+.|.
T Consensus 553 i~G~SaGGlLvga~iN~r-PdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 553 IEGGSAGGLLVGACINQR-PDLFGAVIAKVPFMDV 586 (712)
T ss_pred EecccCccchhHHHhccC-chHhhhhhhcCcceeh
Confidence 999999999999998888 9999999999998874
No 78
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.05 E-value=7.4e-10 Score=76.62 Aligned_cols=91 Identities=24% Similarity=0.331 Sum_probs=63.7
Q ss_pred hhcCCeEEEEECCCCCCCCChhhhHhh----h----hcCCC--------cchhHHHHHHHHHHHhcCCCCCCceEEEecC
Q psy14549 22 VSKRHVIVVHIDARGSAYRSKEQEHSV----Y----RNLGR--------YEIADQIAVVKYLTERFQFIDKTKVGIWGWS 85 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~~~~~~~~~~----~----~~~~~--------~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S 85 (117)
++.+||+|+.+|.||.+....+..... . ..... ....|...+++++++ .+.+|.+||+++|.|
T Consensus 105 ~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~s-lpevD~~rI~v~G~S 183 (320)
T PF05448_consen 105 WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRS-LPEVDGKRIGVTGGS 183 (320)
T ss_dssp HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHT-STTEEEEEEEEEEET
T ss_pred cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHh-CCCcCcceEEEEeec
Confidence 567999999999999884332211100 0 00111 125889999999999 899999999999999
Q ss_pred hHHHHHHHHHhhCCCCceEEEEeeCC-CCCC
Q psy14549 86 YGGFATAMVLATDTQNVFKCGVSVAP-VTNF 115 (117)
Q Consensus 86 ~Gg~~a~~~~~~~~~~~~~~~v~~~~-~~~~ 115 (117)
+||.+++.+++-+ + +|+++++..| ++|+
T Consensus 184 qGG~lal~~aaLd-~-rv~~~~~~vP~l~d~ 212 (320)
T PF05448_consen 184 QGGGLALAAAALD-P-RVKAAAADVPFLCDF 212 (320)
T ss_dssp HHHHHHHHHHHHS-S-T-SEEEEESESSSSH
T ss_pred CchHHHHHHHHhC-c-cccEEEecCCCccch
Confidence 9999999999998 5 6888888776 5553
No 79
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.04 E-value=1.6e-09 Score=76.70 Aligned_cols=85 Identities=13% Similarity=0.143 Sum_probs=59.9
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..+ +++|.|+++|+||+|.|........ ......+..+.+..+.+. +..+++.++|||+||.+++.++.++
T Consensus 148 ~~L-~~~~~Via~DlpG~G~S~~p~~~~~----~~ys~~~~a~~l~~~i~~---l~~~~~~LvG~s~GG~ia~~~a~~~- 218 (383)
T PLN03084 148 PVL-SKNYHAIAFDWLGFGFSDKPQPGYG----FNYTLDEYVSSLESLIDE---LKSDKVSLVVQGYFSPPVVKYASAH- 218 (383)
T ss_pred HHH-hcCCEEEEECCCCCCCCCCCccccc----ccCCHHHHHHHHHHHHHH---hCCCCceEEEECHHHHHHHHHHHhC-
Confidence 334 3589999999999998865322100 012244444444444442 2446899999999999999999999
Q ss_pred CCceEEEEeeCCCC
Q psy14549 100 QNVFKCGVSVAPVT 113 (117)
Q Consensus 100 ~~~~~~~v~~~~~~ 113 (117)
|++++.+|.+++..
T Consensus 219 P~~v~~lILi~~~~ 232 (383)
T PLN03084 219 PDKIKKLILLNPPL 232 (383)
T ss_pred hHhhcEEEEECCCC
Confidence 99999999998764
No 80
>KOG4409|consensus
Probab=99.00 E-value=1.4e-09 Score=75.05 Aligned_cols=81 Identities=16% Similarity=0.101 Sum_probs=58.4
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceE
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFK 104 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~ 104 (117)
+...|.++|.+|.|.|....-+.... .....+.+.++.-+. ....+++.|+|||+||+++..+|.++ |++++
T Consensus 115 ~~~~vyaiDllG~G~SSRP~F~~d~~----~~e~~fvesiE~WR~---~~~L~KmilvGHSfGGYLaa~YAlKy-PerV~ 186 (365)
T KOG4409|consen 115 KIRNVYAIDLLGFGRSSRPKFSIDPT----TAEKEFVESIEQWRK---KMGLEKMILVGHSFGGYLAAKYALKY-PERVE 186 (365)
T ss_pred hcCceEEecccCCCCCCCCCCCCCcc----cchHHHHHHHHHHHH---HcCCcceeEeeccchHHHHHHHHHhC-hHhhc
Confidence 48999999999999987643221111 112233333333223 24667999999999999999999999 99999
Q ss_pred EEEeeCCCC
Q psy14549 105 CGVSVAPVT 113 (117)
Q Consensus 105 ~~v~~~~~~ 113 (117)
..+.++|..
T Consensus 187 kLiLvsP~G 195 (365)
T KOG4409|consen 187 KLILVSPWG 195 (365)
T ss_pred eEEEecccc
Confidence 999999854
No 81
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.00 E-value=1e-09 Score=80.00 Aligned_cols=86 Identities=20% Similarity=0.267 Sum_probs=74.8
Q ss_pred hhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCC
Q psy14549 21 LVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQ 100 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~ 100 (117)
.++.+||+||..|.||.+.|.+.+..... .+..|-.+.|+|+.+ ++..| .+|+++|.|++|+..+.+++.. |
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~-----~E~~Dg~D~I~Wia~-QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~-p 146 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESS-----REAEDGYDTIEWLAK-QPWSN-GNVGMLGLSYLGFTQLAAAALQ-P 146 (563)
T ss_pred eeecCceEEEEecccccccCCcccceecc-----ccccchhHHHHHHHh-CCccC-CeeeeecccHHHHHHHHHHhcC-C
Confidence 46689999999999999999987765443 258889999999999 77655 6999999999999999999998 8
Q ss_pred CceEEEEeeCCCCC
Q psy14549 101 NVFKCGVSVAPVTN 114 (117)
Q Consensus 101 ~~~~~~v~~~~~~~ 114 (117)
+-+++++..+++.|
T Consensus 147 PaLkai~p~~~~~D 160 (563)
T COG2936 147 PALKAIAPTEGLVD 160 (563)
T ss_pred chheeecccccccc
Confidence 88999999999887
No 82
>KOG4391|consensus
Probab=98.98 E-value=1.7e-10 Score=75.07 Aligned_cols=83 Identities=19% Similarity=0.228 Sum_probs=71.0
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
-+..+.++.|+..+|||.|.|.+.+.+... ..|..++++|+.+ ++..|+.+++++|.|.||..+..++..+
T Consensus 100 ~fy~~l~mnv~ivsYRGYG~S~GspsE~GL-------~lDs~avldyl~t-~~~~dktkivlfGrSlGGAvai~lask~- 170 (300)
T KOG4391|consen 100 VFYVNLKMNVLIVSYRGYGKSEGSPSEEGL-------KLDSEAVLDYLMT-RPDLDKTKIVLFGRSLGGAVAIHLASKN- 170 (300)
T ss_pred HHHHHcCceEEEEEeeccccCCCCccccce-------eccHHHHHHHHhc-CccCCcceEEEEecccCCeeEEEeeccc-
Confidence 344578999999999999999887765543 5778999999999 8889999999999999999999999988
Q ss_pred CCceEEEEeeCC
Q psy14549 100 QNVFKCGVSVAP 111 (117)
Q Consensus 100 ~~~~~~~v~~~~ 111 (117)
.+++.+++.-.-
T Consensus 171 ~~ri~~~ivENT 182 (300)
T KOG4391|consen 171 SDRISAIIVENT 182 (300)
T ss_pred hhheeeeeeech
Confidence 888888875443
No 83
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.98 E-value=5.2e-09 Score=74.97 Aligned_cols=82 Identities=15% Similarity=0.183 Sum_probs=60.5
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceE
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFK 104 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~ 104 (117)
..|.|+++|.+|.+.+......... .....++...++++.+... ++.+++.++|||+||.++..++.+. |.++.
T Consensus 72 ~d~nVI~VDw~g~g~s~y~~a~~~t----~~vg~~la~lI~~L~~~~g-l~l~~VhLIGHSLGAhIAg~ag~~~-p~rV~ 145 (442)
T TIGR03230 72 PSANVIVVDWLSRAQQHYPTSAAYT----KLVGKDVAKFVNWMQEEFN-YPWDNVHLLGYSLGAHVAGIAGSLT-KHKVN 145 (442)
T ss_pred CCCEEEEEECCCcCCCCCccccccH----HHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHHHhC-Cccee
Confidence 3699999999998765432111000 1124667788888876333 5788999999999999999998888 88899
Q ss_pred EEEeeCCC
Q psy14549 105 CGVSVAPV 112 (117)
Q Consensus 105 ~~v~~~~~ 112 (117)
.++.+.|.
T Consensus 146 rItgLDPA 153 (442)
T TIGR03230 146 RITGLDPA 153 (442)
T ss_pred EEEEEcCC
Confidence 98888774
No 84
>KOG1838|consensus
Probab=98.98 E-value=4e-09 Score=74.35 Aligned_cols=87 Identities=18% Similarity=0.140 Sum_probs=66.0
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..++++||.++++|.||.+++.-.. .+.+.-...+|+.++++++++++|. .+..++|+||||.+.++++...
T Consensus 148 ~~a~~~G~r~VVfN~RG~~g~~LtT----pr~f~ag~t~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~iL~nYLGE~- 219 (409)
T KOG1838|consen 148 HEAQRKGYRVVVFNHRGLGGSKLTT----PRLFTAGWTEDLREVVNHIKKRYPQ---APLFAVGFSMGGNILTNYLGEE- 219 (409)
T ss_pred HHHHhCCcEEEEECCCCCCCCccCC----CceeecCCHHHHHHHHHHHHHhCCC---CceEEEEecchHHHHHHHhhhc-
Confidence 4456899999999999988765422 1112223489999999999997664 4899999999999999999986
Q ss_pred CC--ceEEEEeeCCCCC
Q psy14549 100 QN--VFKCGVSVAPVTN 114 (117)
Q Consensus 100 ~~--~~~~~v~~~~~~~ 114 (117)
.+ .+.++++++-..|
T Consensus 220 g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 220 GDNTPLIAAVAVCNPWD 236 (409)
T ss_pred cCCCCceeEEEEeccch
Confidence 43 3566666665555
No 85
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.96 E-value=1.2e-09 Score=78.12 Aligned_cols=110 Identities=19% Similarity=0.247 Sum_probs=70.8
Q ss_pred CCCCCccccccccccchhhHhhhcCC-eEEEEECCC-CCCCC--ChhhhHhhhhcCCCcchhHHHHHHHHHHHh---cCC
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRH-VIVVHIDAR-GSAYR--SKEQEHSVYRNLGRYEIADQIAVVKYLTER---FQF 73 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g-~~vv~~d~r-g~g~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~ 73 (117)
|||.... .......+....|+++| ++||++||| |.-+. ...+.. ...........|+..+|+|++++ .+
T Consensus 101 HGG~y~~--Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~-~~~~~~n~Gl~DqilALkWV~~NIe~FG- 176 (491)
T COG2272 101 HGGGYIM--GSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDT-EDAFASNLGLLDQILALKWVRDNIEAFG- 176 (491)
T ss_pred ecccccc--CCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccc-cccccccccHHHHHHHHHHHHHHHHHhC-
Confidence 5665442 22223223345566777 999999999 42221 111110 01111113489999999999988 33
Q ss_pred CCCCceEEEecChHHHHHHHHHhhCC-CCceEEEEeeCCCCC
Q psy14549 74 IDKTKVGIWGWSYGGFATAMVLATDT-QNVFKCGVSVAPVTN 114 (117)
Q Consensus 74 ~d~~~i~i~G~S~Gg~~a~~~~~~~~-~~~~~~~v~~~~~~~ 114 (117)
-|++.|.|+|+|.|++.++.+++... ..+|+.+|+.||.+.
T Consensus 177 GDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 177 GDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred CCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 49999999999999999998877630 126888888887653
No 86
>PLN02872 triacylglycerol lipase
Probab=98.96 E-value=2.3e-10 Score=81.12 Aligned_cols=89 Identities=16% Similarity=0.312 Sum_probs=60.9
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChh----hhHhhhhc--CCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKE----QEHSVYRN--LGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATA 92 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~----~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~ 92 (117)
...++++||.|..+|.||++.+.+. ..+....+ +.+....|+.++++++.+ . ..+++.++|||+||.+++
T Consensus 100 a~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~-~---~~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 100 GFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYS-I---TNSKIFIVGHSQGTIMSL 175 (395)
T ss_pred HHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHh-c---cCCceEEEEECHHHHHHH
Confidence 3456789999999999997654221 11111101 112224799999999987 3 346899999999999998
Q ss_pred HHHhhCCCC---ceEEEEeeCCCC
Q psy14549 93 MVLATDTQN---VFKCGVSVAPVT 113 (117)
Q Consensus 93 ~~~~~~~~~---~~~~~v~~~~~~ 113 (117)
.++ .. |+ .++.+++++|+.
T Consensus 176 ~~~-~~-p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 176 AAL-TQ-PNVVEMVEAAALLCPIS 197 (395)
T ss_pred HHh-hC-hHHHHHHHHHHHhcchh
Confidence 665 45 65 577778888764
No 87
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.92 E-value=9.9e-09 Score=68.76 Aligned_cols=85 Identities=21% Similarity=0.204 Sum_probs=60.8
Q ss_pred hhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh----cC---CCCCCceEEEecChHHHH
Q psy14549 18 HTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER----FQ---FIDKTKVGIWGWSYGGFA 90 (117)
Q Consensus 18 ~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~---~~d~~~i~i~G~S~Gg~~ 90 (117)
....+|+.||+||.+|......... ..+..+..++++|+.+. .+ ..|.+|++|+|||.||.+
T Consensus 36 ll~hvAShGyIVV~~d~~~~~~~~~-----------~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~ 104 (259)
T PF12740_consen 36 LLEHVASHGYIVVAPDLYSIGGPDD-----------TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKV 104 (259)
T ss_pred HHHHHHhCceEEEEecccccCCCCc-----------chhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHH
Confidence 3445679999999999665322111 12366677788887653 11 358899999999999999
Q ss_pred HHHHHhhCC----CCceEEEEeeCCCC
Q psy14549 91 TAMVLATDT----QNVFKCGVSVAPVT 113 (117)
Q Consensus 91 a~~~~~~~~----~~~~~~~v~~~~~~ 113 (117)
+..++..+. +..+++++.+.|+-
T Consensus 105 Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 105 AFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHhhhcccccccceeEEEEecccc
Confidence 988877751 13699999998875
No 88
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.91 E-value=8.5e-09 Score=83.75 Aligned_cols=85 Identities=14% Similarity=0.113 Sum_probs=58.0
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCce
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVF 103 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~ 103 (117)
..+|.|+++|+||+|.|.................+++...+..+.++ ++.+++.++||||||.+++.++.++ |+++
T Consensus 1395 ~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~---l~~~~v~LvGhSmGG~iAl~~A~~~-P~~V 1470 (1655)
T PLN02980 1395 SGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH---ITPGKVTLVGYSMGARIALYMALRF-SDKI 1470 (1655)
T ss_pred hCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH---hCCCCEEEEEECHHHHHHHHHHHhC-hHhh
Confidence 35799999999999987542210000000112244555544444442 3457899999999999999999999 9999
Q ss_pred EEEEeeCCC
Q psy14549 104 KCGVSVAPV 112 (117)
Q Consensus 104 ~~~v~~~~~ 112 (117)
++++.+++.
T Consensus 1471 ~~lVlis~~ 1479 (1655)
T PLN02980 1471 EGAVIISGS 1479 (1655)
T ss_pred CEEEEECCC
Confidence 999988764
No 89
>KOG1515|consensus
Probab=98.91 E-value=1.4e-08 Score=70.59 Aligned_cols=103 Identities=20% Similarity=0.133 Sum_probs=75.9
Q ss_pred CCCCCcccc-ccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh---cCCCCC
Q psy14549 1 YGGPGSNII-SDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER---FQFIDK 76 (117)
Q Consensus 1 ~gGp~~~~~-~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~d~ 76 (117)
|||...... .-..+..++..+..+.+.+|+.+|||-..+..- ....+|...++.|+.++ .-.+|+
T Consensus 97 HGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~-----------Pa~y~D~~~Al~w~~~~~~~~~~~D~ 165 (336)
T KOG1515|consen 97 HGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPF-----------PAAYDDGWAALKWVLKNSWLKLGADP 165 (336)
T ss_pred eCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCC-----------CccchHHHHHHHHHHHhHHHHhCCCc
Confidence 777666332 123334456666678999999999998765432 13378889999998874 234799
Q ss_pred CceEEEecChHHHHHHHHHhhCC-----CCceEEEEeeCCCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDT-----QNVFKCGVSVAPVTN 114 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~-----~~~~~~~v~~~~~~~ 114 (117)
+||+|+|-|.||.+|..++.+-. +..+++.|.+.|+..
T Consensus 166 ~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 166 SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 99999999999999988877631 246899999999765
No 90
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.88 E-value=2.2e-08 Score=73.41 Aligned_cols=89 Identities=15% Similarity=0.193 Sum_probs=62.6
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHH----H
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAM----V 94 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~----~ 94 (117)
...++++||.|+++|.|+.+.+..... +.+...+++.++++.+.+. ....++.++|||+||.++.. +
T Consensus 213 v~~L~~qGf~V~~iDwrgpg~s~~~~~------~ddY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~ 283 (532)
T TIGR01838 213 VRWLVEQGHTVFVISWRNPDASQADKT------FDDYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYL 283 (532)
T ss_pred HHHHHHCCcEEEEEECCCCCcccccCC------hhhhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHH
Confidence 345668999999999999887643221 1123245678888888763 35678999999999998522 2
Q ss_pred HhhCCCCceEEEEeeCCCCCCC
Q psy14549 95 LATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 95 ~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
+....+++++.++.++..+|+.
T Consensus 284 aa~~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 284 AARGDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred HHhCCCCccceEEEEecCcCCC
Confidence 3332156799999999888864
No 91
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.86 E-value=2e-08 Score=70.93 Aligned_cols=86 Identities=13% Similarity=0.140 Sum_probs=57.0
Q ss_pred cCCeEEEEECCCCC-CCCCh-hhhHhh--h---hcCCCcchhHHHHHHHHHHHhcCCCCCCc-eEEEecChHHHHHHHHH
Q psy14549 24 KRHVIVVHIDARGS-AYRSK-EQEHSV--Y---RNLGRYEIADQIAVVKYLTERFQFIDKTK-VGIWGWSYGGFATAMVL 95 (117)
Q Consensus 24 ~~g~~vv~~d~rg~-g~~~~-~~~~~~--~---~~~~~~~~~d~~~~~~~~~~~~~~~d~~~-i~i~G~S~Gg~~a~~~~ 95 (117)
..+|.|+++|.+|. +++.. ...... . .+.......+..+.+..+.+. +..++ +.++||||||.+++.++
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---l~~~~~~~lvG~S~Gg~ia~~~a 165 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDA---LGITRLAAVVGGSMGGMQALEWA 165 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHH---hCCCCceEEEEECHHHHHHHHHH
Confidence 57999999999983 43322 110000 0 011123356666655555553 34467 48999999999999999
Q ss_pred hhCCCCceEEEEeeCCCC
Q psy14549 96 ATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 96 ~~~~~~~~~~~v~~~~~~ 113 (117)
.++ |++++.+|.+++..
T Consensus 166 ~~~-p~~v~~lvl~~~~~ 182 (379)
T PRK00175 166 IDY-PDRVRSALVIASSA 182 (379)
T ss_pred HhC-hHhhhEEEEECCCc
Confidence 999 99999999887643
No 92
>KOG3101|consensus
Probab=98.85 E-value=5.3e-10 Score=72.50 Aligned_cols=43 Identities=30% Similarity=0.518 Sum_probs=40.2
Q ss_pred CCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 73 FIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 73 ~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
.+|+.+++|+||||||+-++-+..++ |.+++.+.+++|++|+.
T Consensus 137 pld~~k~~IfGHSMGGhGAl~~~Lkn-~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 137 PLDPLKVGIFGHSMGGHGALTIYLKN-PSKYKSVSAFAPICNPI 179 (283)
T ss_pred cccchhcceeccccCCCceEEEEEcC-cccccceeccccccCcc
Confidence 47999999999999999999999999 99999999999999975
No 93
>KOG2564|consensus
Probab=98.84 E-value=6.7e-09 Score=69.93 Aligned_cols=73 Identities=25% Similarity=0.195 Sum_probs=52.5
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..+.......++++|.||+|++.-+..+.... +...+|+.++++++-.. ++++|.++||||||.++.+.+...
T Consensus 95 ~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~---eT~~KD~~~~i~~~fge----~~~~iilVGHSmGGaIav~~a~~k 167 (343)
T KOG2564|consen 95 SELKSKIRCRCLALDLRGHGETKVENEDDLSL---ETMSKDFGAVIKELFGE----LPPQIILVGHSMGGAIAVHTAASK 167 (343)
T ss_pred HHHHhhcceeEEEeeccccCccccCChhhcCH---HHHHHHHHHHHHHHhcc----CCCceEEEeccccchhhhhhhhhh
Confidence 34444567888999999999986654433221 23378888888877542 567899999999999997776553
No 94
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.83 E-value=4.7e-09 Score=70.34 Aligned_cols=91 Identities=25% Similarity=0.286 Sum_probs=68.1
Q ss_pred hhcCCeEEEEECCCCCCCCChh----hhH-hhh-----hcCC-------CcchhHHHHHHHHHHHhcCCCCCCceEEEec
Q psy14549 22 VSKRHVIVVHIDARGSAYRSKE----QEH-SVY-----RNLG-------RYEIADQIAVVKYLTERFQFIDKTKVGIWGW 84 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~~~~~----~~~-~~~-----~~~~-------~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~ 84 (117)
++..||.|+.+|-||.+.++.+ ... ..+ ..++ +....|+..+++.+.+ .+.+|.+||++.|.
T Consensus 105 wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~s-l~~vde~Ri~v~G~ 183 (321)
T COG3458 105 WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILAS-LDEVDEERIGVTGG 183 (321)
T ss_pred ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhc-cCccchhheEEecc
Confidence 4568999999999998776331 111 000 0111 1237899999999999 88899999999999
Q ss_pred ChHHHHHHHHHhhCCCCceEEEEeeCC-CCCC
Q psy14549 85 SYGGFATAMVLATDTQNVFKCGVSVAP-VTNF 115 (117)
Q Consensus 85 S~Gg~~a~~~~~~~~~~~~~~~v~~~~-~~~~ 115 (117)
|+||.+++.+++-+ ++++++++..| ++|+
T Consensus 184 SqGGglalaaaal~--~rik~~~~~~Pfl~df 213 (321)
T COG3458 184 SQGGGLALAAAALD--PRIKAVVADYPFLSDF 213 (321)
T ss_pred ccCchhhhhhhhcC--hhhhcccccccccccc
Confidence 99999999998887 57888888887 4443
No 95
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.82 E-value=5.1e-08 Score=65.81 Aligned_cols=95 Identities=18% Similarity=0.251 Sum_probs=67.3
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceE
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVG 80 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~ 80 (117)
||-|+. .+ .+.+....+.+.|+.+|.+|+||++.+.+... ... .-.+-...++.+.++.. ++ .++.
T Consensus 42 hGsPGS---H~--DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~------~n~er~~~~~~ll~~l~-i~-~~~i 107 (297)
T PF06342_consen 42 HGSPGS---HN--DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQY------TNEERQNFVNALLDELG-IK-GKLI 107 (297)
T ss_pred cCCCCC---cc--chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-ccc------ChHHHHHHHHHHHHHcC-CC-CceE
Confidence 777877 33 44456777889999999999999988765322 111 13344555555555332 33 7899
Q ss_pred EEecChHHHHHHHHHhhCCCCceEEEEeeCCC
Q psy14549 81 IWGWSYGGFATAMVLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 81 i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~ 112 (117)
.+|||.|+-.++.++... | ..+++.++|+
T Consensus 108 ~~gHSrGcenal~la~~~-~--~~g~~lin~~ 136 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTH-P--LHGLVLINPP 136 (297)
T ss_pred EEEeccchHHHHHHHhcC-c--cceEEEecCC
Confidence 999999999999999887 5 4577777765
No 96
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.82 E-value=5.3e-09 Score=68.69 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=57.7
Q ss_pred cchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHH
Q psy14549 15 IDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 15 ~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~ 94 (117)
+...+..++++||.|++.||||.+.|.........-.+.+....|+.++++++++.. .-.+...+|||+||.+.-.+
T Consensus 46 YRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~---~~~P~y~vgHS~GGqa~gL~ 122 (281)
T COG4757 46 YRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL---PGHPLYFVGHSFGGQALGLL 122 (281)
T ss_pred hHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC---CCCceEEeeccccceeeccc
Confidence 334456677899999999999999886654442222233344789999999998853 33578899999999985544
Q ss_pred HhhC
Q psy14549 95 LATD 98 (117)
Q Consensus 95 ~~~~ 98 (117)
.+.
T Consensus 123 -~~~ 125 (281)
T COG4757 123 -GQH 125 (281)
T ss_pred -ccC
Confidence 554
No 97
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.80 E-value=1.4e-08 Score=70.68 Aligned_cols=85 Identities=16% Similarity=0.198 Sum_probs=61.8
Q ss_pred cccchhhHhhhcCCeEEEEECCCCCCCCChhhhHh-----hhhcCCCcchhHHHHHHHHHHHh------cCCCCCCceEE
Q psy14549 13 FSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHS-----VYRNLGRYEIADQIAVVKYLTER------FQFIDKTKVGI 81 (117)
Q Consensus 13 ~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~------~~~~d~~~i~i 81 (117)
..+.|....+++.||+|..++++|+..-....... ....+. ....|+..+++++++. .+++|..||++
T Consensus 85 ~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~-erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv 163 (365)
T COG4188 85 TGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWW-ERPLDISALLDALLQLTASPALAGRLDPQRVGV 163 (365)
T ss_pred cchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhh-cccccHHHHHHHHHHhhcCcccccccCccceEE
Confidence 45667888899999999999999964322111111 111221 2378899999998873 23689999999
Q ss_pred EecChHHHHHHHHHhhC
Q psy14549 82 WGWSYGGFATAMVLATD 98 (117)
Q Consensus 82 ~G~S~Gg~~a~~~~~~~ 98 (117)
+|||+||+.++.++...
T Consensus 164 ~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 164 LGHSFGGYTAMELAGAE 180 (365)
T ss_pred EecccccHHHHHhcccc
Confidence 99999999999887764
No 98
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.76 E-value=5.7e-08 Score=66.50 Aligned_cols=96 Identities=18% Similarity=0.324 Sum_probs=58.7
Q ss_pred cccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHH
Q psy14549 13 FSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATA 92 (117)
Q Consensus 13 ~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~ 92 (117)
+.......++ ++||+|+++||.|.+.......... ..+.|...+.+.+....+.-...+++++|+|.||.-++
T Consensus 14 ~e~~~l~~~L-~~GyaVv~pDY~Glg~~y~~~~~~a------~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~ 86 (290)
T PF03583_consen 14 YEAPFLAAWL-ARGYAVVAPDYEGLGTPYLNGRSEA------YAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAAL 86 (290)
T ss_pred hHHHHHHHHH-HCCCEEEecCCCCCCCcccCcHhHH------HHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHH
Confidence 3444444555 8999999999999876221111111 11444444444333311111346899999999999987
Q ss_pred HHHhh---CCCCc---eEEEEeeCCCCCC
Q psy14549 93 MVLAT---DTQNV---FKCGVSVAPVTNF 115 (117)
Q Consensus 93 ~~~~~---~~~~~---~~~~v~~~~~~~~ 115 (117)
..+.. +.|++ +.++++.+++.|+
T Consensus 87 ~AA~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 87 WAAELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred HHHHHhHHhCcccccceeEEeccCCccCH
Confidence 76533 33554 7888888888774
No 99
>PRK11071 esterase YqiA; Provisional
Probab=98.75 E-value=9.6e-08 Score=61.59 Aligned_cols=64 Identities=17% Similarity=0.204 Sum_probs=45.3
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceE
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFK 104 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~ 104 (117)
.+|.|+++|.||++ .+..+.+..+.++. +.+++.++|+|+||++++.++.++ |. +
T Consensus 31 ~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~-~~--~ 85 (190)
T PRK11071 31 PDIEMIVPQLPPYP-------------------ADAAELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCF-ML--P 85 (190)
T ss_pred CCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHc-CC--C
Confidence 48999999999863 11333333333322 346899999999999999999998 73 2
Q ss_pred EEEeeCCCCC
Q psy14549 105 CGVSVAPVTN 114 (117)
Q Consensus 105 ~~v~~~~~~~ 114 (117)
+|.++|..+
T Consensus 86 -~vl~~~~~~ 94 (190)
T PRK11071 86 -AVVVNPAVR 94 (190)
T ss_pred -EEEECCCCC
Confidence 466777655
No 100
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.69 E-value=2.4e-07 Score=59.90 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=51.5
Q ss_pred eEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEE
Q psy14549 27 VIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCG 106 (117)
Q Consensus 27 ~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~ 106 (117)
|.++.+|.||+|.+. .. . .........+..+.+.. ...++.++|||+||.++..++.+. |+.++++
T Consensus 51 ~~~~~~d~~g~g~s~-~~-----~----~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~~~~~~~~~-p~~~~~~ 116 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PA-----G----YSLSAYADDLAALLDAL---GLEKVVLVGHSMGGAVALALALRH-PDRVRGL 116 (282)
T ss_pred eEEEEecccCCCCCC-cc-----c----ccHHHHHHHHHHHHHHh---CCCceEEEEecccHHHHHHHHHhc-chhhhee
Confidence 999999999999987 10 0 00111133333333322 334599999999999999999999 9999999
Q ss_pred EeeCCCC
Q psy14549 107 VSVAPVT 113 (117)
Q Consensus 107 v~~~~~~ 113 (117)
+.+++..
T Consensus 117 v~~~~~~ 123 (282)
T COG0596 117 VLIGPAP 123 (282)
T ss_pred eEecCCC
Confidence 9888654
No 101
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.68 E-value=1.4e-07 Score=67.70 Aligned_cols=95 Identities=17% Similarity=0.201 Sum_probs=63.7
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhH--hhhhcCC-CcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEH--SVYRNLG-RYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVL 95 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~--~~~~~~~-~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~ 95 (117)
..++.+.|-.++.+.+|..|.|..-... ...+.+- +....|++..+++++++....+..++.++|.|++|.++.++-
T Consensus 52 ~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r 131 (434)
T PF05577_consen 52 WELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFR 131 (434)
T ss_dssp HHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHH
Confidence 3445567999999999999987542211 1122222 233788888999988644444667999999999999999999
Q ss_pred hhCCCCceEEEEeeCCCCC
Q psy14549 96 ATDTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 96 ~~~~~~~~~~~v~~~~~~~ 114 (117)
.++ |++|.++++.|+++.
T Consensus 132 ~ky-P~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 132 LKY-PHLFDGAWASSAPVQ 149 (434)
T ss_dssp HH--TTT-SEEEEET--CC
T ss_pred hhC-CCeeEEEEeccceee
Confidence 999 999999999887654
No 102
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.68 E-value=8.9e-08 Score=62.81 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~ 112 (117)
.+-+.++++||++ .+.++.++|+|+|.|.||.+++.++..+ | .++++|+.+|.
T Consensus 3 LEyfe~Ai~~L~~-~p~v~~~~Igi~G~SkGaelALllAs~~-~-~i~avVa~~ps 55 (213)
T PF08840_consen 3 LEYFEEAIDWLKS-HPEVDPDKIGIIGISKGAELALLLASRF-P-QISAVVAISPS 55 (213)
T ss_dssp CHHHHHHHHHHHC-STTB--SSEEEEEETHHHHHHHHHHHHS-S-SEEEEEEES--
T ss_pred hHHHHHHHHHHHh-CCCCCCCCEEEEEECHHHHHHHHHHhcC-C-CccEEEEeCCc
Confidence 3457899999999 8889999999999999999999999998 6 89999999874
No 103
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.68 E-value=7.6e-08 Score=68.11 Aligned_cols=38 Identities=32% Similarity=0.627 Sum_probs=29.3
Q ss_pred CCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCC
Q psy14549 72 QFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAP 111 (117)
Q Consensus 72 ~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~ 111 (117)
+++|.++|+++|||+||..++..+.+. ..++++|.+-|
T Consensus 223 grlD~~~i~~~GHSFGGATa~~~l~~d--~r~~~~I~LD~ 260 (379)
T PF03403_consen 223 GRLDLSRIGLAGHSFGGATALQALRQD--TRFKAGILLDP 260 (379)
T ss_dssp T-EEEEEEEEEEETHHHHHHHHHHHH---TT--EEEEES-
T ss_pred hhcchhheeeeecCchHHHHHHHHhhc--cCcceEEEeCC
Confidence 457889999999999999999998886 67899988765
No 104
>PRK05855 short chain dehydrogenase; Validated
Probab=98.67 E-value=8.5e-08 Score=70.41 Aligned_cols=69 Identities=20% Similarity=0.259 Sum_probs=43.1
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..+ .++|.|+++|+||+|.|.......... . ...++|+..+++.+. ...++.++||||||.+++.++.+
T Consensus 46 ~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~-~-~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 46 PLL-ADRFRVVAYDVRGAGRSSAPKRTAAYT-L-ARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHh-hcceEEEEecCCCCCCCCCCCcccccC-H-HHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHHHhC
Confidence 334 579999999999999886432111100 0 011444444444321 12349999999999999887665
No 105
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.66 E-value=1e-07 Score=65.63 Aligned_cols=86 Identities=23% Similarity=0.271 Sum_probs=60.7
Q ss_pred hhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCC
Q psy14549 21 LVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQ 100 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~ 100 (117)
.+.++||.||++|.||++.+.... ...+-.-+++|+...++++++.. -+.++.++|.|+||.+...++... .
T Consensus 99 ~~~~rg~~~Vv~~~Rgcs~~~n~~----p~~yh~G~t~D~~~~l~~l~~~~---~~r~~~avG~SLGgnmLa~ylgee-g 170 (345)
T COG0429 99 ALSRRGWLVVVFHFRGCSGEANTS----PRLYHSGETEDIRFFLDWLKARF---PPRPLYAVGFSLGGNMLANYLGEE-G 170 (345)
T ss_pred HHHhcCCeEEEEecccccCCcccC----cceecccchhHHHHHHHHHHHhC---CCCceEEEEecccHHHHHHHHHhh-c
Confidence 355899999999999998765421 12222335799999999998842 346899999999996666655554 3
Q ss_pred C--ceEEEEeeCCCCC
Q psy14549 101 N--VFKCGVSVAPVTN 114 (117)
Q Consensus 101 ~--~~~~~v~~~~~~~ 114 (117)
+ .+.++++++.+.|
T Consensus 171 ~d~~~~aa~~vs~P~D 186 (345)
T COG0429 171 DDLPLDAAVAVSAPFD 186 (345)
T ss_pred cCcccceeeeeeCHHH
Confidence 3 3566666665554
No 106
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.66 E-value=1.1e-07 Score=67.55 Aligned_cols=88 Identities=14% Similarity=0.111 Sum_probs=61.6
Q ss_pred hhhcCCeEEEEECCCCCCCCC-------h-hhhHhh-----hhcCCCcchhHHHHHHHHHHHhcCCCCCCceE-EEecCh
Q psy14549 21 LVSKRHVIVVHIDARGSAYRS-------K-EQEHSV-----YRNLGRYEIADQIAVVKYLTERFQFIDKTKVG-IWGWSY 86 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~-------~-~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~-i~G~S~ 86 (117)
.+.-..|.||++|..|.+.+. + ...+.. ..++......|+.+.+..+.+. +..+++. ++||||
T Consensus 94 ~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~---lgi~~~~~vvG~Sm 170 (389)
T PRK06765 94 AIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKS---LGIARLHAVMGPSM 170 (389)
T ss_pred CcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHH---cCCCCceEEEEECH
Confidence 355578999999999865421 1 111110 0123335578888777777664 3446775 999999
Q ss_pred HHHHHHHHHhhCCCCceEEEEeeCCC
Q psy14549 87 GGFATAMVLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 87 Gg~~a~~~~~~~~~~~~~~~v~~~~~ 112 (117)
||++++.++.++ |++++.+|.+++.
T Consensus 171 GG~ial~~a~~~-P~~v~~lv~ia~~ 195 (389)
T PRK06765 171 GGMQAQEWAVHY-PHMVERMIGVIGN 195 (389)
T ss_pred HHHHHHHHHHHC-hHhhheEEEEecC
Confidence 999999999999 9999999988653
No 107
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.64 E-value=3.7e-07 Score=62.46 Aligned_cols=89 Identities=13% Similarity=0.147 Sum_probs=55.7
Q ss_pred HhhhcCCeEEEEECCCCC-CCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhc-CCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 20 YLVSKRHVIVVHIDARGS-AYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERF-QFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~-g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..+.+.+|.|+.+..+.+ .+.+-... +.+++|+...++|+++.. +...+++|+++|||-|+.-+++++.+
T Consensus 57 ~aL~~~~wsl~q~~LsSSy~G~G~~SL--------~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~ 128 (303)
T PF08538_consen 57 EALEETGWSLFQVQLSSSYSGWGTSSL--------DRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSS 128 (303)
T ss_dssp HHHT-TT-EEEEE--GGGBTTS-S--H--------HHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH
T ss_pred HHhccCCeEEEEEEecCccCCcCcchh--------hhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhc
Confidence 334467999999998752 22211111 124899999999999842 22367899999999999999999888
Q ss_pred CCC----CceEEEEeeCCCCCCC
Q psy14549 98 DTQ----NVFKCGVSVAPVTNFL 116 (117)
Q Consensus 98 ~~~----~~~~~~v~~~~~~~~~ 116 (117)
..+ ..+.++|..+|+.|.-
T Consensus 129 ~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 129 PNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp -TT---CCCEEEEEEEEE---TT
T ss_pred cCccccccceEEEEEeCCCCChh
Confidence 622 4699999999999853
No 108
>KOG3043|consensus
Probab=98.62 E-value=4.6e-08 Score=63.90 Aligned_cols=89 Identities=26% Similarity=0.325 Sum_probs=66.6
Q ss_pred hHhhhcCCeEEEEECCC-CCCCCCh----hhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDAR-GSAYRSK----EQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAM 93 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~r-g~g~~~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~ 93 (117)
+..+|..||.|+.||+. |...+.. .......++....-..++..+++|++. .+ +..+|+++|+||||..+..
T Consensus 60 Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~-~g--~~kkIGv~GfCwGak~vv~ 136 (242)
T KOG3043|consen 60 ADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKN-HG--DSKKIGVVGFCWGAKVVVT 136 (242)
T ss_pred HHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHH-cC--CcceeeEEEEeecceEEEE
Confidence 34456789999999965 6433322 233344444444557899999999997 43 5679999999999999999
Q ss_pred HHhhCCCCceEEEEeeCCC
Q psy14549 94 VLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 94 ~~~~~~~~~~~~~v~~~~~ 112 (117)
+.... | .|.+++++.|.
T Consensus 137 ~~~~~-~-~f~a~v~~hps 153 (242)
T KOG3043|consen 137 LSAKD-P-EFDAGVSFHPS 153 (242)
T ss_pred eeccc-h-hheeeeEecCC
Confidence 98887 5 89999988874
No 109
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.61 E-value=6.1e-08 Score=64.48 Aligned_cols=52 Identities=15% Similarity=0.386 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCC
Q psy14549 62 AVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 62 ~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~ 115 (117)
+++.+++++.. ++..+.+|+|+||||+.++.++.++ |+.|.+++++||..++
T Consensus 101 el~p~i~~~~~-~~~~~~~i~G~S~GG~~Al~~~l~~-Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 101 ELIPYIEANYR-TDPDRRAIAGHSMGGYGALYLALRH-PDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHHSS-EEECCEEEEEETHHHHHHHHHHHHS-TTTESEEEEESEESET
T ss_pred cchhHHHHhcc-cccceeEEeccCCCcHHHHHHHHhC-ccccccccccCccccc
Confidence 67777777543 4555599999999999999999999 9999999999987554
No 110
>KOG1553|consensus
Probab=98.61 E-value=9.1e-08 Score=66.39 Aligned_cols=83 Identities=19% Similarity=0.249 Sum_probs=64.3
Q ss_pred hcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCc
Q psy14549 23 SKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNV 102 (117)
Q Consensus 23 a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~ 102 (117)
++.||.|+.+|++|.++|.+.+.... +..-+.+++++.....+ ..++.|.++|+|-||+-+++++..+ |+
T Consensus 265 ~~lgYsvLGwNhPGFagSTG~P~p~n-------~~nA~DaVvQfAI~~Lg-f~~edIilygWSIGGF~~~waAs~Y-Pd- 334 (517)
T KOG1553|consen 265 AQLGYSVLGWNHPGFAGSTGLPYPVN-------TLNAADAVVQFAIQVLG-FRQEDIILYGWSIGGFPVAWAASNY-PD- 334 (517)
T ss_pred HHhCceeeccCCCCccccCCCCCccc-------chHHHHHHHHHHHHHcC-CCccceEEEEeecCCchHHHHhhcC-CC-
Confidence 46899999999999999877543222 23446677888777444 4788999999999999999999999 75
Q ss_pred eEEEEeeCCCCCC
Q psy14549 103 FKCGVSVAPVTNF 115 (117)
Q Consensus 103 ~~~~v~~~~~~~~ 115 (117)
++++|..+.+-|+
T Consensus 335 VkavvLDAtFDDl 347 (517)
T KOG1553|consen 335 VKAVVLDATFDDL 347 (517)
T ss_pred ceEEEeecchhhh
Confidence 7888887765554
No 111
>KOG1516|consensus
Probab=98.60 E-value=4.4e-08 Score=72.03 Aligned_cols=90 Identities=22% Similarity=0.405 Sum_probs=63.2
Q ss_pred hHhhhcCCeEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh---cCCCCCCceEEEecChHHHHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER---FQFIDKTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~d~~~i~i~G~S~Gg~~a~~~ 94 (117)
...+..+..+||+++|| |.-+.........+.+++ ..|+..+++|++++ .+ -|+++|.++|||.||..+..+
T Consensus 137 ~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g---l~Dq~~AL~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 137 AYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG---LFDQLLALRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred hhccccCCEEEEEecccceeceeeecCCCCCCCccc---HHHHHHHHHHHHHHHHhcC-CCCCeEEEEeechhHHHHHHH
Confidence 44555779999999999 533311111222244543 77999999999887 33 499999999999999999887
Q ss_pred HhhCC-CCceEEEEeeCCC
Q psy14549 95 LATDT-QNVFKCGVSVAPV 112 (117)
Q Consensus 95 ~~~~~-~~~~~~~v~~~~~ 112 (117)
+.... ..+|+.+|..++.
T Consensus 213 ~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 213 TLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred hcCHhhHHHHHHHHhhccc
Confidence 76530 1367777777764
No 112
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.59 E-value=2.1e-07 Score=63.43 Aligned_cols=52 Identities=25% Similarity=0.359 Sum_probs=45.3
Q ss_pred HHHHH-HHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCC
Q psy14549 61 IAVVK-YLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 61 ~~~~~-~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~ 114 (117)
...++ -+.+ ...+|++||.++|.|+||+.++.++.++ |+.|.+++.++|-.|
T Consensus 253 idli~~vlas-~ynID~sRIYviGlSrG~~gt~al~~kf-PdfFAaa~~iaG~~d 305 (387)
T COG4099 253 IDLILEVLAS-TYNIDRSRIYVIGLSRGGFGTWALAEKF-PDFFAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHHhh-ccCcccceEEEEeecCcchhhHHHHHhC-chhhheeeeecCCCc
Confidence 33444 5556 7789999999999999999999999999 999999999999877
No 113
>KOG4667|consensus
Probab=98.58 E-value=1.8e-07 Score=61.07 Aligned_cols=93 Identities=14% Similarity=0.162 Sum_probs=73.4
Q ss_pred ccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHH
Q psy14549 14 SIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAM 93 (117)
Q Consensus 14 ~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~ 93 (117)
...-.+..+++.|+-++-+|.+|.|+|.+.+.....+ .+++|+..+++++.. .++.--+|+|||-||..++.
T Consensus 50 ~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~----~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ 121 (269)
T KOG4667|consen 50 IMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYN----TEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLL 121 (269)
T ss_pred HHHHHHHHHHhcCceEEEEEecCCCCcCCccccCccc----chHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHH
Confidence 3334456677899999999999999998876544433 447999999999876 35556789999999999999
Q ss_pred HHhhCCCCceEEEEeeCCCCCCC
Q psy14549 94 VLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 94 ~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
++.++ ++ ++-++.++|=.|.+
T Consensus 122 ya~K~-~d-~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 122 YASKY-HD-IRNVINCSGRYDLK 142 (269)
T ss_pred HHHhh-cC-chheEEcccccchh
Confidence 99998 65 77888888866643
No 114
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.53 E-value=6.4e-07 Score=70.23 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=52.1
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
..++++||.|+++|+ |.+...... ....+. ..+..+.++++.+++ . ..+++.++||||||.+++.++..+.
T Consensus 93 ~~L~~~g~~v~~~d~---G~~~~~~~~-~~~~l~-~~i~~l~~~l~~v~~-~---~~~~v~lvG~s~GG~~a~~~aa~~~ 163 (994)
T PRK07868 93 GILHRAGLDPWVIDF---GSPDKVEGG-MERNLA-DHVVALSEAIDTVKD-V---TGRDVHLVGYSQGGMFCYQAAAYRR 163 (994)
T ss_pred HHHHHCCCEEEEEcC---CCCChhHcC-ccCCHH-HHHHHHHHHHHHHHH-h---hCCceEEEEEChhHHHHHHHHHhcC
Confidence 445688999999995 222221100 000110 002233444444443 1 2358999999999999988876541
Q ss_pred CCceEEEEeeCCCCCC
Q psy14549 100 QNVFKCGVSVAPVTNF 115 (117)
Q Consensus 100 ~~~~~~~v~~~~~~~~ 115 (117)
+++++.++.++..+|+
T Consensus 164 ~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 164 SKDIASIVTFGSPVDT 179 (994)
T ss_pred CCccceEEEEeccccc
Confidence 4579999887777664
No 115
>PRK11460 putative hydrolase; Provisional
Probab=98.52 E-value=4.6e-07 Score=60.11 Aligned_cols=52 Identities=12% Similarity=0.178 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
+.+.++++.+ ...++.+||+++|||+||.+++.++.+. |+.+.+++++++..
T Consensus 87 l~~~i~~~~~-~~~~~~~~i~l~GfS~Gg~~al~~a~~~-~~~~~~vv~~sg~~ 138 (232)
T PRK11460 87 FIETVRYWQQ-QSGVGASATALIGFSQGAIMALEAVKAE-PGLAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHH-hcCCChhhEEEEEECHHHHHHHHHHHhC-CCcceEEEEecccc
Confidence 3455566655 4446888999999999999999999888 88888888887743
No 116
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.50 E-value=4.2e-07 Score=59.54 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=33.2
Q ss_pred CCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 74 IDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 74 ~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
++.+||++.|+|+||.+++.++.+. |+.+.++++++|..
T Consensus 102 i~~~ri~l~GFSQGa~~al~~~l~~-p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 102 IDPSRIFLGGFSQGAAMALYLALRY-PEPLAGVVALSGYL 140 (216)
T ss_dssp --GGGEEEEEETHHHHHHHHHHHCT-SSTSSEEEEES---
T ss_pred CChhheehhhhhhHHHHHHHHHHHc-CcCcCEEEEeeccc
Confidence 7999999999999999999999999 99999999999864
No 117
>COG0627 Predicted esterase [General function prediction only]
Probab=98.48 E-value=2e-07 Score=64.43 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=36.2
Q ss_pred CceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
++.+|+||||||+-++.++.++ |++|+.+.+++|+.+..
T Consensus 152 ~~~aI~G~SMGG~GAl~lA~~~-pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 152 DGRAIAGHSMGGYGALKLALKH-PDRFKSASSFSGILSPS 190 (316)
T ss_pred CCceeEEEeccchhhhhhhhhC-cchhceecccccccccc
Confidence 3899999999999999999999 99999999999988753
No 118
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.48 E-value=1.3e-06 Score=64.26 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=63.3
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHH----H
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAM----V 94 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~----~ 94 (117)
...+.++|+.|..+|.+..+.....+.- .++ +..+.++++.+++. ....+|.++|+|+||.+++. +
T Consensus 240 Vr~lv~qG~~VflIsW~nP~~~~r~~~l------dDY-v~~i~~Ald~V~~~---tG~~~vnl~GyC~GGtl~a~~~a~~ 309 (560)
T TIGR01839 240 VQYCLKNQLQVFIISWRNPDKAHREWGL------STY-VDALKEAVDAVRAI---TGSRDLNLLGACAGGLTCAALVGHL 309 (560)
T ss_pred HHHHHHcCCeEEEEeCCCCChhhcCCCH------HHH-HHHHHHHHHHHHHh---cCCCCeeEEEECcchHHHHHHHHHH
Confidence 3455689999999999986544222111 112 34677888887773 24578999999999999986 6
Q ss_pred HhhCCCC-ceEEEEeeCCCCCCC
Q psy14549 95 LATDTQN-VFKCGVSVAPVTNFL 116 (117)
Q Consensus 95 ~~~~~~~-~~~~~v~~~~~~~~~ 116 (117)
+++. ++ .++.++.++.++|+.
T Consensus 310 aA~~-~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 310 QALG-QLRKVNSLTYLVSLLDST 331 (560)
T ss_pred HhcC-CCCceeeEEeeecccccC
Confidence 6676 75 799999999988864
No 119
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.47 E-value=7.4e-07 Score=64.19 Aligned_cols=85 Identities=12% Similarity=0.072 Sum_probs=59.5
Q ss_pred hhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 18 HTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 18 ~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
....+.+.||.+ ..|.+|.+.++..... . .....++.+.++.+.+.. ...++.++||||||.++..++..
T Consensus 113 li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~----~~~~~~Lk~lIe~~~~~~---g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 113 MIEQLIKWGYKE-GKTLFGFGYDFRQSNR--L----PETMDGLKKKLETVYKAS---GGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHcCCcc-CCCcccCCCCcccccc--H----HHHHHHHHHHHHHHHHHc---CCCCEEEEEECHhHHHHHHHHHH
Confidence 345566899876 7899998876553210 0 112566777777766532 34689999999999999999887
Q ss_pred CCCC----ceEEEEeeCCCC
Q psy14549 98 DTQN----VFKCGVSVAPVT 113 (117)
Q Consensus 98 ~~~~----~~~~~v~~~~~~ 113 (117)
. |+ .++..|++++..
T Consensus 183 ~-p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 183 H-SDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred C-CHhHHhHhccEEEECCCC
Confidence 7 65 367888887653
No 120
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.41 E-value=2.3e-06 Score=61.29 Aligned_cols=52 Identities=17% Similarity=0.139 Sum_probs=43.1
Q ss_pred HHHHHHHHHhcC-CCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 61 IAVVKYLTERFQ-FIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 61 ~~~~~~~~~~~~-~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
.+++-++.++++ ..|+++.+|.|+||||..++.++.++ |+.|.+++++||-.
T Consensus 271 ~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~-Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 271 QELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHW-PERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhC-cccccEEEEeccce
Confidence 355566666433 34788999999999999999999999 99999999999854
No 121
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.41 E-value=3e-06 Score=57.44 Aligned_cols=100 Identities=19% Similarity=0.236 Sum_probs=63.4
Q ss_pred ccccchhhHhhh--cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHH-HHHHHHHHhcCC--CCCCceEEEecCh
Q psy14549 12 RFSIDFHTYLVS--KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQI-AVVKYLTERFQF--IDKTKVGIWGWSY 86 (117)
Q Consensus 12 ~~~~~~~~~~~a--~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~--~d~~~i~i~G~S~ 86 (117)
+|+..+...+.. ...+.|.+..+.|+.......... .+......+|+. ..++.+++.... ....++.++|||.
T Consensus 16 ~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~--~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSI 93 (266)
T PF10230_consen 16 EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS--PNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSI 93 (266)
T ss_pred HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc--CCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcH
Confidence 355556554443 358999999999987655431111 111112244444 333444332111 1457899999999
Q ss_pred HHHHHHHHHhhCCC---CceEEEEeeCCCCC
Q psy14549 87 GGFATAMVLATDTQ---NVFKCGVSVAPVTN 114 (117)
Q Consensus 87 Gg~~a~~~~~~~~~---~~~~~~v~~~~~~~ 114 (117)
|++++++++.+. + ..+..++.+-|++.
T Consensus 94 Gayi~levl~r~-~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 94 GAYIALEVLKRL-PDLKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHHhc-cccCCceeEEEEeCCccc
Confidence 999999999998 7 57888888888653
No 122
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.40 E-value=1.7e-06 Score=60.03 Aligned_cols=72 Identities=19% Similarity=0.233 Sum_probs=56.3
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..++-+.+..|+.+||||-+.|.+.... .+ .+.|..+.++|++++...+...+|.+.|||.||.++..++.+
T Consensus 164 ~~~ak~~~aNvl~fNYpGVg~S~G~~s~---~d----Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 164 QRFAKELGANVLVFNYPGVGSSTGPPSR---KD----LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHcCCcEEEECCCccccCCCCCCH---HH----HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 3445468999999999999988775532 22 288899999999874434678899999999999998886554
No 123
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.35 E-value=1.1e-06 Score=67.03 Aligned_cols=79 Identities=27% Similarity=0.328 Sum_probs=52.0
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhh---------Hh-hh----------hcCCCcchhHHHHHHHHHH------Hh--
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQE---------HS-VY----------RNLGRYEIADQIAVVKYLT------ER-- 70 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~---------~~-~~----------~~~~~~~~~d~~~~~~~~~------~~-- 70 (117)
...++++||.|+++|+||+|.+..... .. .+ .++ +..+.|+...+..+. +.
T Consensus 469 A~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~-rQ~v~Dll~L~~~l~~~~~~~~~~~ 547 (792)
T TIGR03502 469 AGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNL-RQSILDLLGLRLSLNGSALAGAPLS 547 (792)
T ss_pred HHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCH-HHHHHHHHHHHHHHhcccccccccc
Confidence 344567899999999999998833200 00 00 011 223566666666665 11
Q ss_pred -cCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 71 -FQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 71 -~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
....+..++.++||||||.++..++...
T Consensus 548 ~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 548 GINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1124678999999999999999998764
No 124
>KOG1454|consensus
Probab=98.33 E-value=2.9e-06 Score=59.08 Aligned_cols=73 Identities=19% Similarity=0.307 Sum_probs=50.8
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceE
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFK 104 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~ 104 (117)
.|+.|.++|.+|.|.+........ ..+.+....+..+-.. .-.+++.++|||+||.++..+|..+ |+.++
T Consensus 85 ~~~~v~aiDl~G~g~~s~~~~~~~------y~~~~~v~~i~~~~~~---~~~~~~~lvghS~Gg~va~~~Aa~~-P~~V~ 154 (326)
T KOG1454|consen 85 KGLRVLAIDLPGHGYSSPLPRGPL------YTLRELVELIRRFVKE---VFVEPVSLVGHSLGGIVALKAAAYY-PETVD 154 (326)
T ss_pred cceEEEEEecCCCCcCCCCCCCCc------eehhHHHHHHHHHHHh---hcCcceEEEEeCcHHHHHHHHHHhC-ccccc
Confidence 369999999999774332211111 2244444444443332 2445699999999999999999999 99999
Q ss_pred EEE
Q psy14549 105 CGV 107 (117)
Q Consensus 105 ~~v 107 (117)
.++
T Consensus 155 ~lv 157 (326)
T KOG1454|consen 155 SLV 157 (326)
T ss_pred cee
Confidence 998
No 125
>COG0400 Predicted esterase [General function prediction only]
Probab=98.32 E-value=1.6e-06 Score=56.73 Aligned_cols=57 Identities=16% Similarity=0.140 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~ 115 (117)
+..+.+.+..+.+ .-.++.+|+.++|+|.|+.+++.++.+. |+.+++++.++|..-+
T Consensus 80 ~~~~~~~l~~~~~-~~gi~~~~ii~~GfSqGA~ial~~~l~~-~~~~~~ail~~g~~~~ 136 (207)
T COG0400 80 TEKLAEFLEELAE-EYGIDSSRIILIGFSQGANIALSLGLTL-PGLFAGAILFSGMLPL 136 (207)
T ss_pred HHHHHHHHHHHHH-HhCCChhheEEEecChHHHHHHHHHHhC-chhhccchhcCCcCCC
Confidence 4555566666666 3446899999999999999999999999 9999999999987644
No 126
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.31 E-value=1.7e-06 Score=60.38 Aligned_cols=87 Identities=13% Similarity=0.180 Sum_probs=60.6
Q ss_pred hhcCCeEEEEECCCCCC-CCChhhhHhhh-----hcCCCcchhHHHHHHHHHHHhcCCCCCCceE-EEecChHHHHHHHH
Q psy14549 22 VSKRHVIVVHIDARGSA-YRSKEQEHSVY-----RNLGRYEIADQIAVVKYLTERFQFIDKTKVG-IWGWSYGGFATAMV 94 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g-~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~-i~G~S~Gg~~a~~~ 94 (117)
+.-..|-||++|..|.. +|.+....... ..+....+.|+..+-+.+.++.+ -.++. |+|.||||+.++..
T Consensus 88 iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LG---I~~l~avvGgSmGGMqaleW 164 (368)
T COG2021 88 IDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALG---IKKLAAVVGGSMGGMQALEW 164 (368)
T ss_pred CCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcC---cceEeeeeccChHHHHHHHH
Confidence 34467999999999754 44332211111 12233457788888877767544 24555 89999999999999
Q ss_pred HhhCCCCceEEEEeeCCC
Q psy14549 95 LATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 95 ~~~~~~~~~~~~v~~~~~ 112 (117)
+..+ |+.++.++.++..
T Consensus 165 a~~y-Pd~V~~~i~ia~~ 181 (368)
T COG2021 165 AIRY-PDRVRRAIPIATA 181 (368)
T ss_pred HHhC-hHHHhhhheeccc
Confidence 9999 9999888887753
No 127
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.29 E-value=3e-06 Score=56.92 Aligned_cols=81 Identities=22% Similarity=0.273 Sum_probs=56.9
Q ss_pred hhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcC-------CCCCCceEEEecChHHHHHHH
Q psy14549 21 LVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQ-------FIDKTKVGIWGWSYGGFATAM 93 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------~~d~~~i~i~G~S~Gg~~a~~ 93 (117)
..++.||+|++|+......-. +..++++..++++|+.+... ..+.++++++|||.||..+..
T Consensus 68 HIASHGfIVVAPQl~~~~~p~-----------~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFA 136 (307)
T PF07224_consen 68 HIASHGFIVVAPQLYTLFPPD-----------GQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFA 136 (307)
T ss_pred HHhhcCeEEEechhhcccCCC-----------chHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHH
Confidence 346899999999976432211 11236778888888876411 347889999999999999999
Q ss_pred HHhhCCCC-ceEEEEeeCCC
Q psy14549 94 VLATDTQN-VFKCGVSVAPV 112 (117)
Q Consensus 94 ~~~~~~~~-~~~~~v~~~~~ 112 (117)
++..+..+ .|++.|.+-|+
T Consensus 137 lALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 137 LALGYATSLKFSALIGIDPV 156 (307)
T ss_pred HHhcccccCchhheeccccc
Confidence 88876112 37777766665
No 128
>KOG2984|consensus
Probab=98.22 E-value=4.4e-07 Score=58.88 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=58.0
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceE
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFK 104 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~ 104 (117)
.-+.||++|.||+|.|......-.... -.+|...+++-++. ++.+++.|+|+|=||..++..++++ ++.+.
T Consensus 70 l~~TivawDPpGYG~SrPP~Rkf~~~f----f~~Da~~avdLM~a----Lk~~~fsvlGWSdGgiTalivAak~-~e~v~ 140 (277)
T KOG2984|consen 70 LQVTIVAWDPPGYGTSRPPERKFEVQF----FMKDAEYAVDLMEA----LKLEPFSVLGWSDGGITALIVAAKG-KEKVN 140 (277)
T ss_pred CceEEEEECCCCCCCCCCCcccchHHH----HHHhHHHHHHHHHH----hCCCCeeEeeecCCCeEEEEeeccC-hhhhh
Confidence 349999999999998765322211111 26777778887766 5789999999999999999999998 88776
Q ss_pred EEEeeCC
Q psy14549 105 CGVSVAP 111 (117)
Q Consensus 105 ~~v~~~~ 111 (117)
..+..++
T Consensus 141 rmiiwga 147 (277)
T KOG2984|consen 141 RMIIWGA 147 (277)
T ss_pred hheeecc
Confidence 6555443
No 129
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.17 E-value=4.1e-06 Score=56.30 Aligned_cols=42 Identities=21% Similarity=0.229 Sum_probs=38.2
Q ss_pred cCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 71 FQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 71 ~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
...++++|.+|+|||+||.+++..+..+ |+.|.+.++.||-.
T Consensus 131 ~y~~~~~~~~i~GhSlGGLfvl~aLL~~-p~~F~~y~~~SPSl 172 (264)
T COG2819 131 RYRTNSERTAIIGHSLGGLFVLFALLTY-PDCFGRYGLISPSL 172 (264)
T ss_pred ccccCcccceeeeecchhHHHHHHHhcC-cchhceeeeecchh
Confidence 4557999999999999999999999999 99999999999854
No 130
>KOG2183|consensus
Probab=98.11 E-value=5.2e-06 Score=58.87 Aligned_cols=90 Identities=22% Similarity=0.280 Sum_probs=63.9
Q ss_pred hhhcCCeEEEEECCCCCCCCCh--hhhHhhhhcCC----CcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHH
Q psy14549 21 LVSKRHVIVVHIDARGSAYRSK--EQEHSVYRNLG----RYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~~--~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~ 94 (117)
++.+.+-.+|.+.+|-.|+|-. +.......+++ ++...|.+..++.++++ ......+|.++|.|+||+++.++
T Consensus 106 ~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~-~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 106 LAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRD-LSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred hhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhc-cccccCcEEEecCchhhHHHHHH
Confidence 3446788999999998887622 11111222221 23367888999999884 44577899999999999999999
Q ss_pred HhhCCCCceEEEEe-eCCC
Q psy14549 95 LATDTQNVFKCGVS-VAPV 112 (117)
Q Consensus 95 ~~~~~~~~~~~~v~-~~~~ 112 (117)
-.++ |.++.++.+ .+|+
T Consensus 185 RlKY-PHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 185 RLKY-PHIVLGALAASAPV 202 (492)
T ss_pred HhcC-hhhhhhhhhccCce
Confidence 9999 988666554 4454
No 131
>KOG3847|consensus
Probab=98.10 E-value=9.1e-06 Score=55.93 Aligned_cols=37 Identities=19% Similarity=0.534 Sum_probs=31.5
Q ss_pred CCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCC
Q psy14549 73 FIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAP 111 (117)
Q Consensus 73 ~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~ 111 (117)
.+|.++++|+|||+||..++..+..+ ..|+|+|++-+
T Consensus 237 nl~~s~~aViGHSFGgAT~i~~ss~~--t~FrcaI~lD~ 273 (399)
T KOG3847|consen 237 NLDTSQAAVIGHSFGGATSIASSSSH--TDFRCAIALDA 273 (399)
T ss_pred chhhhhhhheeccccchhhhhhhccc--cceeeeeeeee
Confidence 47889999999999999999988775 57999987653
No 132
>KOG4627|consensus
Probab=98.09 E-value=5e-06 Score=54.14 Aligned_cols=82 Identities=10% Similarity=0.043 Sum_probs=60.5
Q ss_pred hhhcCCeEEEEECCCCCCCC-ChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC
Q psy14549 21 LVSKRHVIVVHIDARGSAYR-SKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT 99 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~ 99 (117)
-+.++||.|+..+|-.+..- .. ...+.++...++|+.+..+ +-..+.+-|||.|+.++..+.++..
T Consensus 92 ~a~~~gY~vasvgY~l~~q~htL-----------~qt~~~~~~gv~filk~~~--n~k~l~~gGHSaGAHLa~qav~R~r 158 (270)
T KOG4627|consen 92 PAVRRGYRVASVGYNLCPQVHTL-----------EQTMTQFTHGVNFILKYTE--NTKVLTFGGHSAGAHLAAQAVMRQR 158 (270)
T ss_pred hhhhcCeEEEEeccCcCcccccH-----------HHHHHHHHHHHHHHHHhcc--cceeEEEcccchHHHHHHHHHHHhc
Confidence 34579999999998765431 11 1126778888888887433 4456888999999999998888753
Q ss_pred CCceEEEEeeCCCCCC
Q psy14549 100 QNVFKCGVSVAPVTNF 115 (117)
Q Consensus 100 ~~~~~~~v~~~~~~~~ 115 (117)
.+++.+++.++|++++
T Consensus 159 ~prI~gl~l~~GvY~l 174 (270)
T KOG4627|consen 159 SPRIWGLILLCGVYDL 174 (270)
T ss_pred CchHHHHHHHhhHhhH
Confidence 4588999988888765
No 133
>KOG2182|consensus
Probab=98.05 E-value=1.7e-05 Score=57.30 Aligned_cols=95 Identities=20% Similarity=0.163 Sum_probs=70.3
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhh--hHhhhhcCC-CcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQ--EHSVYRNLG-RYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~--~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
..+.+-|-.|+...||-.|.+.... .....+.+- .....|+++.++.+..+....+..+++.+|.|+-|.++.++-.
T Consensus 112 ~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~ 191 (514)
T KOG2182|consen 112 QWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE 191 (514)
T ss_pred HHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH
Confidence 4556789999999999887553211 111111111 2346888888888877665667779999999999999999999
Q ss_pred hCCCCceEEEEeeCCCCCC
Q psy14549 97 TDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 97 ~~~~~~~~~~v~~~~~~~~ 115 (117)
.+ |+++.++|+.+++...
T Consensus 192 ~y-Pel~~GsvASSapv~A 209 (514)
T KOG2182|consen 192 KY-PELTVGSVASSAPVLA 209 (514)
T ss_pred hC-chhheeecccccceeE
Confidence 99 9999999888876543
No 134
>KOG4389|consensus
Probab=97.98 E-value=4.5e-06 Score=60.34 Aligned_cols=91 Identities=22% Similarity=0.326 Sum_probs=64.0
Q ss_pred HhhhcCCeEEEEECCC-CCCCCCh-hhhHhhhhcCCCcchhHHHHHHHHHHHh---cCCCCCCceEEEecChHHHHHHHH
Q psy14549 20 YLVSKRHVIVVHIDAR-GSAYRSK-EQEHSVYRNLGRYEIADQIAVVKYLTER---FQFIDKTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~r-g~g~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~d~~~i~i~G~S~Gg~~a~~~ 94 (117)
.+++.++.+|+.+||| |.-+.-. ...+..+++.+ ..|+.=+++|++++ .+ -|++||.++|.|.|+.-+..-
T Consensus 160 ~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG---l~DQqLAl~WV~~Ni~aFG-Gnp~~vTLFGESAGaASv~aH 235 (601)
T KOG4389|consen 160 FLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG---LLDQQLALQWVQENIAAFG-GNPSRVTLFGESAGAASVVAH 235 (601)
T ss_pred eeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc---hHHHHHHHHHHHHhHHHhC-CCcceEEEeccccchhhhhhe
Confidence 3455789999999999 5332211 12333444543 88999999999987 33 499999999999999887666
Q ss_pred HhhC-CCCceEEEEeeCCCCC
Q psy14549 95 LATD-TQNVFKCGVSVAPVTN 114 (117)
Q Consensus 95 ~~~~-~~~~~~~~v~~~~~~~ 114 (117)
+... +..+|+-+|..||-.|
T Consensus 236 LlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 236 LLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred ecCCCchhhHHHHHhhcCCCC
Confidence 5553 0236888888887554
No 135
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.92 E-value=9.6e-05 Score=51.66 Aligned_cols=85 Identities=15% Similarity=0.190 Sum_probs=58.8
Q ss_pred hhcCCeEEEEECCCCCCCCChhhhHh-hh------hcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHH
Q psy14549 22 VSKRHVIVVHIDARGSAYRSKEQEHS-VY------RNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~~~~~~~~~-~~------~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~ 94 (117)
++++|+..+.+..+.+|......... .. -..+...+.+....++|+++ .+. .+++|.|.||||.+|...
T Consensus 117 Ll~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~-~G~---~~~g~~G~SmGG~~A~la 192 (348)
T PF09752_consen 117 LLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLER-EGY---GPLGLTGISMGGHMAALA 192 (348)
T ss_pred HHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHh-cCC---CceEEEEechhHhhHHhh
Confidence 44679999999988777543322111 00 11122347788889999998 443 599999999999999999
Q ss_pred HhhCCCCceEEEEeeCC
Q psy14549 95 LATDTQNVFKCGVSVAP 111 (117)
Q Consensus 95 ~~~~~~~~~~~~v~~~~ 111 (117)
+... |..+..+-.+++
T Consensus 193 a~~~-p~pv~~vp~ls~ 208 (348)
T PF09752_consen 193 ASNW-PRPVALVPCLSW 208 (348)
T ss_pred hhcC-CCceeEEEeecc
Confidence 8888 876655544443
No 136
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.91 E-value=6.4e-05 Score=49.79 Aligned_cols=77 Identities=18% Similarity=0.104 Sum_probs=48.3
Q ss_pred CCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC---CCceEEEEee
Q psy14549 33 DARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT---QNVFKCGVSV 109 (117)
Q Consensus 33 d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~---~~~~~~~v~~ 109 (117)
-+||+..+..+|.+...--+. ........+++++.+.... .+.++.+.|||.||.+|..++.... .+++..++++
T Consensus 42 aFRGTd~t~~~W~ed~~~~~~-~~~~~q~~A~~yl~~~~~~-~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~f 119 (224)
T PF11187_consen 42 AFRGTDDTLVDWKEDFNMSFQ-DETPQQKSALAYLKKIAKK-YPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSF 119 (224)
T ss_pred EEECCCCchhhHHHHHHhhcC-CCCHHHHHHHHHHHHHHHh-CCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEe
Confidence 357775555555543322222 2255566777777664222 3346999999999999999988840 2367777766
Q ss_pred CC
Q psy14549 110 AP 111 (117)
Q Consensus 110 ~~ 111 (117)
-+
T Consensus 120 Dg 121 (224)
T PF11187_consen 120 DG 121 (224)
T ss_pred eC
Confidence 54
No 137
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.80 E-value=4.8e-05 Score=53.15 Aligned_cols=94 Identities=15% Similarity=0.147 Sum_probs=53.0
Q ss_pred ccccchhhHhhhc--CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHH
Q psy14549 12 RFSIDFHTYLVSK--RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGF 89 (117)
Q Consensus 12 ~~~~~~~~~~~a~--~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~ 89 (117)
.|.......++.. +++.||++|+....... ....... . +.....+...++.|.+.. .++.++|.++|||+|++
T Consensus 88 ~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~--Y~~a~~n-~-~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAH 162 (331)
T PF00151_consen 88 SWIQDMIKALLQKDTGDYNVIVVDWSRGASNN--YPQAVAN-T-RLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAH 162 (331)
T ss_dssp THHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHH-H-HHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHH
T ss_pred hHHHHHHHHHHhhccCCceEEEEcchhhcccc--ccchhhh-H-HHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchh
Confidence 3444444445545 68999999987432221 1111111 0 011344566777777523 36889999999999999
Q ss_pred HHHHHHhhCCCC--ceEEEEeeCC
Q psy14549 90 ATAMVLATDTQN--VFKCGVSVAP 111 (117)
Q Consensus 90 ~a~~~~~~~~~~--~~~~~v~~~~ 111 (117)
++..+.... .. .+..+..+-|
T Consensus 163 vaG~aG~~~-~~~~ki~rItgLDP 185 (331)
T PF00151_consen 163 VAGFAGKYL-KGGGKIGRITGLDP 185 (331)
T ss_dssp HHHHHHHHT-TT---SSEEEEES-
T ss_pred hhhhhhhhc-cCcceeeEEEecCc
Confidence 999888776 44 4555555544
No 138
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.76 E-value=7.7e-05 Score=48.04 Aligned_cols=80 Identities=18% Similarity=0.221 Sum_probs=58.5
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...++++|+.|+.+|-+-+-++.+++. ....|+.+++++-.+ ++ ...++.++|.|+|+-+.-.+..+-
T Consensus 22 a~~l~~~G~~VvGvdsl~Yfw~~rtP~---------~~a~Dl~~~i~~y~~-~w--~~~~vvLiGYSFGADvlP~~~nrL 89 (192)
T PF06057_consen 22 AEALAKQGVPVVGVDSLRYFWSERTPE---------QTAADLARIIRHYRA-RW--GRKRVVLIGYSFGADVLPFIYNRL 89 (192)
T ss_pred HHHHHHCCCeEEEechHHHHhhhCCHH---------HHHHHHHHHHHHHHH-Hh--CCceEEEEeecCCchhHHHHHhhC
Confidence 345668999999999775544433322 226788888888877 43 557999999999998887777766
Q ss_pred CCC----ceEEEEeeCC
Q psy14549 99 TQN----VFKCGVSVAP 111 (117)
Q Consensus 99 ~~~----~~~~~v~~~~ 111 (117)
|+ .++.++.++|
T Consensus 90 -p~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 90 -PAALRARVAQVVLLSP 105 (192)
T ss_pred -CHHHHhheeEEEEecc
Confidence 53 5777777766
No 139
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.71 E-value=0.00017 Score=52.54 Aligned_cols=90 Identities=11% Similarity=0.068 Sum_probs=58.2
Q ss_pred CCeEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC---CC
Q psy14549 25 RHVIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD---TQ 100 (117)
Q Consensus 25 ~g~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~---~~ 100 (117)
+-..++.+|.+ |.|.|....... ..-....+.|+..+++...++.+.....++.|+|+|+||..+..++.+- +.
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~~~--~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~ 197 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKADY--DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNK 197 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCCCC--CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcc
Confidence 34678888875 777664432111 1111123677777777665557777778999999999999886665541 01
Q ss_pred ------CceEEEEeeCCCCCCC
Q psy14549 101 ------NVFKCGVSVAPVTNFL 116 (117)
Q Consensus 101 ------~~~~~~v~~~~~~~~~ 116 (117)
-.+++++.-.|.+|+.
T Consensus 198 ~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 198 KGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred ccCCceeeeEEEEEeccccChh
Confidence 1368888888887753
No 140
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.69 E-value=7.3e-05 Score=51.13 Aligned_cols=54 Identities=19% Similarity=0.193 Sum_probs=44.5
Q ss_pred HHHHHHHHhcCC-CCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 62 AVVKYLTERFQF-IDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 62 ~~~~~~~~~~~~-~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
+.+-+++++++. -+.++-+++|.|+||..++..+..+ |++|..+++.||..+|.
T Consensus 161 eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~-Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 161 ELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRH-PERFGHVLSQSGSFWWT 215 (299)
T ss_pred HhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcC-chhhceeeccCCccccC
Confidence 455666665442 2667799999999999999999999 99999999999988764
No 141
>KOG4840|consensus
Probab=97.68 E-value=4.2e-05 Score=50.49 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=63.1
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+.+.++.++.+..+.+-.-.+.+. + ..+.+|+..+++++.. .. ..+.|+++|||-|+.-.++++...
T Consensus 59 ~~~lde~~wslVq~q~~Ssy~G~Gt~s------l-k~D~edl~~l~~Hi~~-~~--fSt~vVL~GhSTGcQdi~yYlTnt 128 (299)
T KOG4840|consen 59 NRYLDENSWSLVQPQLRSSYNGYGTFS------L-KDDVEDLKCLLEHIQL-CG--FSTDVVLVGHSTGCQDIMYYLTNT 128 (299)
T ss_pred HHHHhhccceeeeeecccccccccccc------c-cccHHHHHHHHHHhhc-cC--cccceEEEecCccchHHHHHHHhc
Confidence 344568999999999886432111110 1 2358899999998766 43 345899999999999999998442
Q ss_pred C-CCceEEEEeeCCCCCCC
Q psy14549 99 T-QNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 99 ~-~~~~~~~v~~~~~~~~~ 116 (117)
. +..++++|..+|+.|..
T Consensus 129 ~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 129 TKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cchHHHHHHHHhCccchhh
Confidence 1 45689999999998853
No 142
>KOG2624|consensus
Probab=97.66 E-value=6.1e-05 Score=53.81 Aligned_cols=92 Identities=21% Similarity=0.246 Sum_probs=68.1
Q ss_pred hhHhhhcCCeEEEEECCCCCCCCChhh--hHh-hhhcC----CCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHH
Q psy14549 18 HTYLVSKRHVIVVHIDARGSAYRSKEQ--EHS-VYRNL----GRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFA 90 (117)
Q Consensus 18 ~~~~~a~~g~~vv~~d~rg~g~~~~~~--~~~-~~~~~----~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~ 90 (117)
.+..++++||.|=.-|-||...|.+-. ... ....| .+....|+.+.++++.+. -.++++..+|||+|+..
T Consensus 98 Laf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~---T~~~kl~yvGHSQGtt~ 174 (403)
T KOG2624|consen 98 LAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK---TGQEKLHYVGHSQGTTT 174 (403)
T ss_pred HHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh---ccccceEEEEEEccchh
Confidence 467788999999999999955543311 111 11122 233478999999999884 26789999999999999
Q ss_pred HHHHHhhCCCC---ceEEEEeeCCCC
Q psy14549 91 TAMVLATDTQN---VFKCGVSVAPVT 113 (117)
Q Consensus 91 a~~~~~~~~~~---~~~~~v~~~~~~ 113 (117)
...++... |+ .++..++++|+.
T Consensus 175 ~fv~lS~~-p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 175 FFVMLSER-PEYNKKIKSFIALAPAA 199 (403)
T ss_pred heehhccc-chhhhhhheeeeecchh
Confidence 88777666 54 689999999976
No 143
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.63 E-value=0.00068 Score=44.96 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=47.5
Q ss_pred CCeEEEEECCCCCCC--CChhhhHhhhhcCCCcchhHHHHHHHHHHHhc--CCCCCCceEEEecChHHHHHHHHHhhCC-
Q psy14549 25 RHVIVVHIDARGSAY--RSKEQEHSVYRNLGRYEIADQIAVVKYLTERF--QFIDKTKVGIWGWSYGGFATAMVLATDT- 99 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~d~~~i~i~G~S~Gg~~a~~~~~~~~- 99 (117)
..+.+++.|+..... .+.... . ..+.+...++.+.+.. ......+|.++||||||.++-.++....
T Consensus 38 ~~~d~ft~df~~~~s~~~g~~l~-~--------q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~ 108 (225)
T PF07819_consen 38 SHFDFFTVDFNEELSAFHGRTLQ-R--------QAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNY 108 (225)
T ss_pred cceeEEEeccCccccccccccHH-H--------HHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhcccc
Confidence 468888888775321 111111 0 1233444555554422 1236789999999999999888776541
Q ss_pred -CCceEEEEeeCCC
Q psy14549 100 -QNVFKCGVSVAPV 112 (117)
Q Consensus 100 -~~~~~~~v~~~~~ 112 (117)
++.++.++.++.+
T Consensus 109 ~~~~v~~iitl~tP 122 (225)
T PF07819_consen 109 DPDSVKTIITLGTP 122 (225)
T ss_pred ccccEEEEEEEcCC
Confidence 2368888877743
No 144
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.62 E-value=0.0004 Score=44.19 Aligned_cols=53 Identities=21% Similarity=0.162 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHH-hhCCCCceEEEEeeCCCC
Q psy14549 59 DQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVL-ATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~-~~~~~~~~~~~v~~~~~~ 113 (117)
+..+.++.+.+....+ ...+.++|||.|+..++.++ ... ...+++++.++|.-
T Consensus 38 ~~~~W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~~~~-~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAI-DEPTILVAHSLGCLTALRWLAEQS-QKKVAGALLVAPFD 91 (171)
T ss_dssp -HHHHHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHHHTC-CSSEEEEEEES--S
T ss_pred CHHHHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHhhcc-cccccEEEEEcCCC
Confidence 3555666666633223 34699999999999999999 666 77899999999874
No 145
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.60 E-value=0.00018 Score=47.94 Aligned_cols=63 Identities=14% Similarity=0.174 Sum_probs=42.9
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcC-CCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQ-FIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
--+.++.++++|.+....... ..|+.+..+.+..... ..-....+++||||||.++-+++.+.
T Consensus 32 ~~iel~avqlPGR~~r~~ep~-----------~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl 95 (244)
T COG3208 32 ADIELLAVQLPGRGDRFGEPL-----------LTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRL 95 (244)
T ss_pred chhheeeecCCCcccccCCcc-----------cccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHH
Confidence 368899999999877543221 4455555555544311 12334799999999999998888774
No 146
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.52 E-value=0.00074 Score=45.63 Aligned_cols=56 Identities=23% Similarity=0.230 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCC--C--CceEEEEeeCCCCCC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDT--Q--NVFKCGVSVAPVTNF 115 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~--~--~~~~~~v~~~~~~~~ 115 (117)
...+..++.+|++++ .-.++=++||||||.....++..+. + +.+...|+++++.|-
T Consensus 86 a~wl~~vl~~L~~~Y---~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 86 AKWLKKVLKYLKKKY---HFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHHCC-----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHHHHHhc---CCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 566778889888843 3479999999999999999998851 1 257888988887663
No 147
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.51 E-value=0.00058 Score=44.65 Aligned_cols=80 Identities=13% Similarity=0.119 Sum_probs=47.1
Q ss_pred hhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHH-HHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 18 HTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQ-IAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 18 ~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
....+....+.|..++++|........ ...+++ ...++.+++..+ ..++.++|||+||.+|..++.
T Consensus 19 la~~l~~~~~~v~~i~~~~~~~~~~~~----------~si~~la~~y~~~I~~~~~---~gp~~L~G~S~Gg~lA~E~A~ 85 (229)
T PF00975_consen 19 LARALPDDVIGVYGIEYPGRGDDEPPP----------DSIEELASRYAEAIRARQP---EGPYVLAGWSFGGILAFEMAR 85 (229)
T ss_dssp HHHHHTTTEEEEEEECSTTSCTTSHEE----------SSHHHHHHHHHHHHHHHTS---SSSEEEEEETHHHHHHHHHHH
T ss_pred HHHhCCCCeEEEEEEecCCCCCCCCCC----------CCHHHHHHHHHHHhhhhCC---CCCeeehccCccHHHHHHHHH
Confidence 444452225999999999876221110 012223 345555555322 238999999999999999887
Q ss_pred hC--CCCceEEEEeeC
Q psy14549 97 TD--TQNVFKCGVSVA 110 (117)
Q Consensus 97 ~~--~~~~~~~~v~~~ 110 (117)
+- ....+..++.+.
T Consensus 86 ~Le~~G~~v~~l~liD 101 (229)
T PF00975_consen 86 QLEEAGEEVSRLILID 101 (229)
T ss_dssp HHHHTT-SESEEEEES
T ss_pred HHHHhhhccCceEEec
Confidence 62 022355666555
No 148
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.43 E-value=0.00079 Score=41.71 Aligned_cols=36 Identities=17% Similarity=0.167 Sum_probs=27.1
Q ss_pred CCCceEEEecChHHHHHHHHHhhCCCC----ceEEEEeeCC
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLATDTQN----VFKCGVSVAP 111 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~~~~~----~~~~~v~~~~ 111 (117)
...+|.++|||+||.++..++... +. ....++++++
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~-~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDL-RGRGLGRLVRVYTFGP 65 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHH-HhccCCCceEEEEeCC
Confidence 457999999999999998887776 43 3455666654
No 149
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.43 E-value=0.0014 Score=43.37 Aligned_cols=72 Identities=14% Similarity=0.046 Sum_probs=40.4
Q ss_pred hhHhhhcCCeE---EEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHH
Q psy14549 18 HTYLVSKRHVI---VVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 18 ~~~~~a~~g~~---vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~ 94 (117)
....+.++||. |.+++|-............ .. ...+.++.+.++.+++. -.. ||-|+|||||+.++-++
T Consensus 21 ~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~--~~--~~~~~~l~~fI~~Vl~~---TGa-kVDIVgHS~G~~iaR~y 92 (219)
T PF01674_consen 21 LAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAH--MS--CESAKQLRAFIDAVLAY---TGA-KVDIVGHSMGGTIARYY 92 (219)
T ss_dssp HHHHHHHTT--CCCEEEE--S-CCHHTHHHHHH--B---HHHHHHHHHHHHHHHHH---HT---EEEEEETCHHHHHHHH
T ss_pred HHHHHHHcCCCcceeEeccCCCCCCCCcccccc--cc--hhhHHHHHHHHHHHHHh---hCC-EEEEEEcCCcCHHHHHH
Confidence 44556689999 7999985443322111111 01 01246677777777663 133 99999999999999888
Q ss_pred Hhh
Q psy14549 95 LAT 97 (117)
Q Consensus 95 ~~~ 97 (117)
...
T Consensus 93 i~~ 95 (219)
T PF01674_consen 93 IKG 95 (219)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 150
>KOG2382|consensus
Probab=97.41 E-value=0.00062 Score=47.09 Aligned_cols=78 Identities=17% Similarity=0.089 Sum_probs=51.8
Q ss_pred hhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHH-HHHHHHHhhCC
Q psy14549 21 LVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGG-FATAMVLATDT 99 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg-~~a~~~~~~~~ 99 (117)
+..+.+-.|+..|.|-+|.|...-... ....++|+...++..... .--.++.+.|||||| .+++......
T Consensus 75 Ls~~l~~~v~~vd~RnHG~Sp~~~~h~-----~~~ma~dv~~Fi~~v~~~---~~~~~~~l~GHsmGG~~~~m~~t~~~- 145 (315)
T KOG2382|consen 75 LSRKLGRDVYAVDVRNHGSSPKITVHN-----YEAMAEDVKLFIDGVGGS---TRLDPVVLLGHSMGGVKVAMAETLKK- 145 (315)
T ss_pred hcccccCceEEEecccCCCCccccccC-----HHHHHHHHHHHHHHcccc---cccCCceecccCcchHHHHHHHHHhc-
Confidence 334567799999999988876543222 112366666666665431 123589999999999 6667776777
Q ss_pred CCceEEEE
Q psy14549 100 QNVFKCGV 107 (117)
Q Consensus 100 ~~~~~~~v 107 (117)
|+.+..++
T Consensus 146 p~~~~rli 153 (315)
T KOG2382|consen 146 PDLIERLI 153 (315)
T ss_pred CcccceeE
Confidence 87765544
No 151
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.37 E-value=0.00051 Score=44.32 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=27.3
Q ss_pred CCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCC
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~ 114 (117)
..+.+.++|.|+||+.|..++.++ + +++ |.+.|..+
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~-~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERY-G--LPA-VLINPAVR 92 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHh-C--CCE-EEEcCCCC
Confidence 334599999999999999999887 3 333 66666554
No 152
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.35 E-value=0.00018 Score=39.97 Aligned_cols=25 Identities=16% Similarity=0.201 Sum_probs=21.6
Q ss_pred hhHhhhcCCeEEEEECCCCCCCCCh
Q psy14549 18 HTYLVSKRHVIVVHIDARGSAYRSK 42 (117)
Q Consensus 18 ~~~~~a~~g~~vv~~d~rg~g~~~~ 42 (117)
....++++||.|+++|+||+|.|.+
T Consensus 35 ~a~~L~~~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 35 LAEFLAEQGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred HHHHHHhCCCEEEEECCCcCCCCCC
Confidence 4566779999999999999999974
No 153
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.32 E-value=0.00082 Score=47.93 Aligned_cols=62 Identities=18% Similarity=0.160 Sum_probs=48.5
Q ss_pred hcCCCcchhHHHHHHHHHHHhcCCCC-CCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCC
Q psy14549 50 RNLGRYEIADQIAVVKYLTERFQFID-KTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 50 ~~~~~~~~~d~~~~~~~~~~~~~~~d-~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~ 112 (117)
++++-..+.|+..++.++.++.+... .-++.+.|+|.||+++..++.-. |..+.+++--|+-
T Consensus 156 QN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~a-P~~~~~~iDns~~ 218 (403)
T PF11144_consen 156 QNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIA-PWLFDGVIDNSSY 218 (403)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhC-ccceeEEEecCcc
Confidence 34443447899999999988755443 24899999999999999998887 9999998866653
No 154
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.31 E-value=0.00076 Score=49.40 Aligned_cols=92 Identities=17% Similarity=0.103 Sum_probs=64.2
Q ss_pred hhcCCeEEEEECCCCCCC------CChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHH
Q psy14549 22 VSKRHVIVVHIDARGSAY------RSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVL 95 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~ 95 (117)
..++||+++.-|.=..+. +.. .......++.-....+...+-+.+.+.+-...+.+-...|.|-||..++..+
T Consensus 55 ~~~~G~A~~~TD~Gh~~~~~~~~~~~~-~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~A 133 (474)
T PF07519_consen 55 ALARGYATASTDSGHQGSAGSDDASFG-NNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAA 133 (474)
T ss_pred hhhcCeEEEEecCCCCCCccccccccc-CCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHH
Confidence 347999999999432222 122 2223334444333555555555555543334778899999999999999999
Q ss_pred hhCCCCceEEEEeeCCCCCC
Q psy14549 96 ATDTQNVFKCGVSVAPVTNF 115 (117)
Q Consensus 96 ~~~~~~~~~~~v~~~~~~~~ 115 (117)
.++ |+.|.++++-+|..||
T Consensus 134 Qry-P~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 134 QRY-PEDFDGILAGAPAINW 152 (474)
T ss_pred HhC-hhhcCeEEeCCchHHH
Confidence 999 9999999999998886
No 155
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.24 E-value=0.0016 Score=39.47 Aligned_cols=52 Identities=25% Similarity=0.305 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC---CC---CceEEEEeeCCC
Q psy14549 58 ADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD---TQ---NVFKCGVSVAPV 112 (117)
Q Consensus 58 ~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~---~~---~~~~~~v~~~~~ 112 (117)
..+...++.+.++.+ ..+|.+.|||+||.+|..++... .+ ..+++...-+|.
T Consensus 48 ~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~ 105 (140)
T PF01764_consen 48 DQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPR 105 (140)
T ss_dssp HHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-
T ss_pred HHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcc
Confidence 344455555555343 36899999999999997776662 01 345555554443
No 156
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.20 E-value=0.0032 Score=42.24 Aligned_cols=86 Identities=12% Similarity=-0.029 Sum_probs=48.9
Q ss_pred CCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCC--Cce
Q psy14549 2 GGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDK--TKV 79 (117)
Q Consensus 2 gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~--~~i 79 (117)
||......+ .-.|.+.-..++++||+|++.=|.-.-+...--.+ ....+...++.+.+ ...++. -++
T Consensus 24 GGaf~ga~P-~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~---------~~~~f~~~~~~L~~-~~~~~~~~lP~ 92 (250)
T PF07082_consen 24 GGAFVGAAP-QITYRYLLERLADRGYAVIATPYVVTFDHQAIARE---------VWERFERCLRALQK-RGGLDPAYLPV 92 (250)
T ss_pred CcceeccCc-HHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHH---------HHHHHHHHHHHHHH-hcCCCcccCCe
Confidence 444444332 33444555556689999999988743322111110 02334445555555 332332 267
Q ss_pred EEEecChHHHHHHHHHhhC
Q psy14549 80 GIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 80 ~i~G~S~Gg~~a~~~~~~~ 98 (117)
.=+|||+|+-+-+.+...+
T Consensus 93 ~~vGHSlGcklhlLi~s~~ 111 (250)
T PF07082_consen 93 YGVGHSLGCKLHLLIGSLF 111 (250)
T ss_pred eeeecccchHHHHHHhhhc
Confidence 7899999999988876554
No 157
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.19 E-value=0.0016 Score=46.75 Aligned_cols=88 Identities=16% Similarity=0.188 Sum_probs=63.6
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+.++|..|..++.+....+-.. .++.+.-.+++..+++.+++. .-..+|-++|+|.||.+...++...
T Consensus 132 V~~l~~~g~~vfvIsw~nPd~~~~~------~~~edYi~e~l~~aid~v~~i---tg~~~InliGyCvGGtl~~~ala~~ 202 (445)
T COG3243 132 VRWLLEQGLDVFVISWRNPDASLAA------KNLEDYILEGLSEAIDTVKDI---TGQKDINLIGYCVGGTLLAAALALM 202 (445)
T ss_pred HHHHHHcCCceEEEeccCchHhhhh------ccHHHHHHHHHHHHHHHHHHH---hCccccceeeEecchHHHHHHHHhh
Confidence 3556689999999998876554332 122222246677888888773 2336899999999999998888887
Q ss_pred CCCc-eEEEEeeCCCCCCC
Q psy14549 99 TQNV-FKCGVSVAPVTNFL 116 (117)
Q Consensus 99 ~~~~-~~~~v~~~~~~~~~ 116 (117)
+.. ++.++.+..+.|+.
T Consensus 203 -~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 203 -AAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred -hhcccccceeeecchhhc
Confidence 766 88888887777764
No 158
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.19 E-value=0.00024 Score=45.22 Aligned_cols=52 Identities=17% Similarity=0.192 Sum_probs=42.1
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 61 IAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 61 ~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
.+.-+|+.+. .-+.+..+.|.|||++.+..+..++ |+++.++|+++|+.|.+
T Consensus 88 ~AyerYv~eE---alpgs~~~sgcsmGayhA~nfvfrh-P~lftkvialSGvYdar 139 (227)
T COG4947 88 RAYERYVIEE---ALPGSTIVSGCSMGAYHAANFVFRH-PHLFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHHh---hcCCCccccccchhhhhhhhhheeC-hhHhhhheeecceeeHH
Confidence 3455666653 2345677889999999999999999 99999999999998754
No 159
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.10 E-value=0.0061 Score=43.32 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=54.7
Q ss_pred CeEEEEECCCCCC--CCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC---C-
Q psy14549 26 HVIVVHIDARGSA--YRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD---T- 99 (117)
Q Consensus 26 g~~vv~~d~rg~g--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~---~- 99 (117)
...++..||.... +.+... +....+..+..+++.+..+ ...|.++|-|.||.+++.++..- +
T Consensus 154 ~~SILvLDYsLt~~~~~~~~y---------PtQL~qlv~~Y~~Lv~~~G---~~nI~LmGDSAGGnL~Ls~LqyL~~~~~ 221 (374)
T PF10340_consen 154 EVSILVLDYSLTSSDEHGHKY---------PTQLRQLVATYDYLVESEG---NKNIILMGDSAGGNLALSFLQYLKKPNK 221 (374)
T ss_pred CCeEEEEeccccccccCCCcC---------chHHHHHHHHHHHHHhccC---CCeEEEEecCccHHHHHHHHHHHhhcCC
Confidence 6699999998654 111111 1236778889999885343 36899999999999997776542 0
Q ss_pred CCceEEEEeeCCCCCCC
Q psy14549 100 QNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 100 ~~~~~~~v~~~~~~~~~ 116 (117)
....+.+|.+||=+++.
T Consensus 222 ~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 222 LPYPKSAILISPWVNLV 238 (374)
T ss_pred CCCCceeEEECCCcCCc
Confidence 12368999999976653
No 160
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.08 E-value=0.0032 Score=42.36 Aligned_cols=92 Identities=15% Similarity=0.117 Sum_probs=50.8
Q ss_pred ccchhhHhhhcCCeEEEEECCCCC-CCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHH
Q psy14549 14 SIDFHTYLVSKRHVIVVHIDARGS-AYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATA 92 (117)
Q Consensus 14 ~~~~~~~~~a~~g~~vv~~d~rg~-g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~ 92 (117)
.+.-.+++++..||+|+-+|..-+ |.|.+...+-... ....++..+++|+++ .+ ..+++++--|..+-+|.
T Consensus 45 h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms----~g~~sL~~V~dwl~~-~g---~~~~GLIAaSLSaRIAy 116 (294)
T PF02273_consen 45 HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS----IGKASLLTVIDWLAT-RG---IRRIGLIAASLSARIAY 116 (294)
T ss_dssp GGHHHHHHHHTTT--EEEE---B-------------HH----HHHHHHHHHHHHHHH-TT------EEEEEETTHHHHHH
T ss_pred HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH----HhHHHHHHHHHHHHh-cC---CCcchhhhhhhhHHHHH
Confidence 344456778899999999998754 5565553332222 226788899999997 54 36799999999999999
Q ss_pred HHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 93 MVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 93 ~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
..+.. ++ +.-.|..-|+.|++
T Consensus 117 ~Va~~--i~-lsfLitaVGVVnlr 137 (294)
T PF02273_consen 117 EVAAD--IN-LSFLITAVGVVNLR 137 (294)
T ss_dssp HHTTT--S---SEEEEES--S-HH
T ss_pred HHhhc--cC-cceEEEEeeeeeHH
Confidence 99774 44 55566555777653
No 161
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.04 E-value=0.0039 Score=39.73 Aligned_cols=52 Identities=17% Similarity=0.026 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCC
Q psy14549 59 DQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~ 112 (117)
+....+..+.+... .-...+.+++||.|+..+++++.+. ...++++..++|.
T Consensus 42 ~~~dWi~~l~~~v~-a~~~~~vlVAHSLGc~~v~h~~~~~-~~~V~GalLVApp 93 (181)
T COG3545 42 VLDDWIARLEKEVN-AAEGPVVLVAHSLGCATVAHWAEHI-QRQVAGALLVAPP 93 (181)
T ss_pred CHHHHHHHHHHHHh-ccCCCeEEEEecccHHHHHHHHHhh-hhccceEEEecCC
Confidence 34444444444211 2234599999999999999999887 6679999998874
No 162
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.01 E-value=0.0022 Score=45.85 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC------ceEEEEeeCCCC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN------VFKCGVSVAPVT 113 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~------~~~~~v~~~~~~ 113 (117)
...+...++.+.+. +..+|.|+||||||.++..++... +. .++..|+++++.
T Consensus 103 ~~~lk~~ie~~~~~----~~~kv~li~HSmGgl~~~~fl~~~-~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 103 FTKLKQLIEEAYKK----NGKKVVLIAHSMGGLVARYFLQWM-PQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHHHHHHHHHh----cCCcEEEEEeCCCchHHHHHHHhc-cchhhHHhhhhEEEEeCCCC
Confidence 34455555555442 357999999999999999988776 43 378888888753
No 163
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.99 E-value=0.0034 Score=44.73 Aligned_cols=90 Identities=14% Similarity=0.121 Sum_probs=54.9
Q ss_pred CCeEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh---CCC
Q psy14549 25 RHVIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT---DTQ 100 (117)
Q Consensus 25 ~g~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~---~~~ 100 (117)
+-..++.+|++ |.|-|............ +..++|+..+|+...++.+.....++.|+|.|+||..+-.++.. .+.
T Consensus 84 ~~an~l~iD~PvGtGfS~~~~~~~~~~~~-~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~ 162 (415)
T PF00450_consen 84 KFANLLFIDQPVGTGFSYGNDPSDYVWND-DQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNK 162 (415)
T ss_dssp GTSEEEEE--STTSTT-EESSGGGGS-SH-HHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTC
T ss_pred cccceEEEeecCceEEeeccccccccchh-hHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccc
Confidence 45778999977 77766443332211111 12366666666665555887777899999999999877554433 102
Q ss_pred ------CceEEEEeeCCCCCC
Q psy14549 101 ------NVFKCGVSVAPVTNF 115 (117)
Q Consensus 101 ------~~~~~~v~~~~~~~~ 115 (117)
-.+++++...|.+|+
T Consensus 163 ~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 163 KGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp C--STTSEEEEEEEESE-SBH
T ss_pred cccccccccccceecCccccc
Confidence 237899988888774
No 164
>KOG2112|consensus
Probab=96.88 E-value=0.0062 Score=39.75 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=35.0
Q ss_pred CCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCC
Q psy14549 73 FIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTN 114 (117)
Q Consensus 73 ~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~ 114 (117)
.++.+||.+-|+|+||.++++.+..+ |..+.+.+..++...
T Consensus 89 Gi~~~rI~igGfs~G~a~aL~~~~~~-~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 89 GIPSNRIGIGGFSQGGALALYSALTY-PKALGGIFALSGFLP 129 (206)
T ss_pred CCCccceeEcccCchHHHHHHHHhcc-ccccceeeccccccc
Confidence 36889999999999999999999998 877777777776544
No 165
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.76 E-value=0.0055 Score=40.45 Aligned_cols=36 Identities=17% Similarity=0.112 Sum_probs=24.6
Q ss_pred CCceEEEecChHHHHHHHHHhhCC----CCceEEEEeeCC
Q psy14549 76 KTKVGIWGWSYGGFATAMVLATDT----QNVFKCGVSVAP 111 (117)
Q Consensus 76 ~~~i~i~G~S~Gg~~a~~~~~~~~----~~~~~~~v~~~~ 111 (117)
..++.++|||+||.+|..++.... +..+.+...-+|
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P 166 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQP 166 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCC
Confidence 468999999999999987766520 123555554444
No 166
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=96.74 E-value=0.013 Score=37.17 Aligned_cols=84 Identities=18% Similarity=0.089 Sum_probs=48.4
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChh--hhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKE--QEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
...++.+|+.|+-++.+........ ....... .....-+.++ ..+.. ..+..+..+-|+||||-++...+.
T Consensus 36 a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~---t~~~~~~~~~-aql~~---~l~~gpLi~GGkSmGGR~aSmvad 108 (213)
T COG3571 36 AAALARRGWLVARFEFPYMAARRTGRRKPPPGSG---TLNPEYIVAI-AQLRA---GLAEGPLIIGGKSMGGRVASMVAD 108 (213)
T ss_pred HHHHHhCceeEEEeecchhhhccccCCCCcCccc---cCCHHHHHHH-HHHHh---cccCCceeeccccccchHHHHHHH
Confidence 4456789999999997764322111 0111111 1112222233 23333 245568999999999999988876
Q ss_pred hCCCCceEEEEeeC
Q psy14549 97 TDTQNVFKCGVSVA 110 (117)
Q Consensus 97 ~~~~~~~~~~v~~~ 110 (117)
.- ...+.+.++++
T Consensus 109 e~-~A~i~~L~clg 121 (213)
T COG3571 109 EL-QAPIDGLVCLG 121 (213)
T ss_pred hh-cCCcceEEEec
Confidence 64 33466766654
No 167
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.71 E-value=0.0092 Score=48.29 Aligned_cols=74 Identities=12% Similarity=0.059 Sum_probs=45.6
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHH-HHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh---CC
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAV-VKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT---DT 99 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~---~~ 99 (117)
..++.|+.++.+|.+..... .....++... ++.+.. .. ...++.++|||+||.++..++.+ .
T Consensus 1092 ~~~~~v~~~~~~g~~~~~~~----------~~~l~~la~~~~~~i~~-~~--~~~p~~l~G~S~Gg~vA~e~A~~l~~~- 1157 (1296)
T PRK10252 1092 DPQWSIYGIQSPRPDGPMQT----------ATSLDEVCEAHLATLLE-QQ--PHGPYHLLGYSLGGTLAQGIAARLRAR- 1157 (1296)
T ss_pred CCCCcEEEEECCCCCCCCCC----------CCCHHHHHHHHHHHHHh-hC--CCCCEEEEEechhhHHHHHHHHHHHHc-
Confidence 46799999999988643210 0113333322 222322 11 12479999999999999999885 4
Q ss_pred CCceEEEEeeCC
Q psy14549 100 QNVFKCGVSVAP 111 (117)
Q Consensus 100 ~~~~~~~v~~~~ 111 (117)
++.+..++.+.+
T Consensus 1158 ~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1158 GEEVAFLGLLDT 1169 (1296)
T ss_pred CCceeEEEEecC
Confidence 566766665543
No 168
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.66 E-value=0.016 Score=42.82 Aligned_cols=55 Identities=24% Similarity=0.338 Sum_probs=37.7
Q ss_pred chhHHHHHHHHH----HHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeC-CCC
Q psy14549 56 EIADQIAVVKYL----TERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVA-PVT 113 (117)
Q Consensus 56 ~~~d~~~~~~~~----~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~-~~~ 113 (117)
...|+..+.... .+..+ +..|..++|.|+||+.++.+++.+ |+++.-+|.-. |+.
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp--~~~kp~liGnCQgGWa~~mlAA~~-Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHP--DAPKPNLIGNCQGGWAAMMLAALR-PDLVGPLVLAGAPLS 176 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCC--CCCCceEEeccHHHHHHHHHHhcC-cCccCceeecCCCcc
Confidence 356665443333 33222 344999999999999999999999 99886665444 443
No 169
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.62 E-value=0.0027 Score=41.57 Aligned_cols=56 Identities=21% Similarity=0.261 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC-------CCCceEEEEeeCCCC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD-------TQNVFKCGVSVAPVT 113 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~-------~~~~~~~~v~~~~~~ 113 (117)
..++..+++++.+. -.-+..-.+|+|+|+|+.++..++... ....++.+|.+++..
T Consensus 83 ~~~~~~sl~~l~~~-i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 83 YEGLDESLDYLRDY-IEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp G---HHHHHHHHHH-HHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ccCHHHHHHHHHHH-HHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 34556666666552 111222489999999999998877542 023478888888754
No 170
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.60 E-value=0.012 Score=40.28 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=50.4
Q ss_pred cCCeEEEEECCCCCCCCChhhhHh-hhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCc
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHS-VYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNV 102 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~ 102 (117)
.+.|.++-+|.+|+-+-.....+. .++ .++++++.+..+.++. .-..+.-+|--.|+++-..++..+ |++
T Consensus 53 ~~~f~i~Hi~aPGqe~ga~~~p~~y~yP-----smd~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~-p~~ 123 (283)
T PF03096_consen 53 LQNFCIYHIDAPGQEEGAATLPEGYQYP-----SMDQLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKH-PER 123 (283)
T ss_dssp HTTSEEEEEE-TTTSTT-----TT----------HHHHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHS-GGG
T ss_pred hhceEEEEEeCCCCCCCccccccccccc-----CHHHHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccC-ccc
Confidence 479999999999987643332221 111 1344444444444422 224688999999999999999999 999
Q ss_pred eEEEEeeCCCCC
Q psy14549 103 FKCGVSVAPVTN 114 (117)
Q Consensus 103 ~~~~v~~~~~~~ 114 (117)
+.+.|.+++.+.
T Consensus 124 V~GLiLvn~~~~ 135 (283)
T PF03096_consen 124 VLGLILVNPTCT 135 (283)
T ss_dssp EEEEEEES---S
T ss_pred eeEEEEEecCCC
Confidence 999999988653
No 171
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.58 E-value=0.017 Score=38.52 Aligned_cols=82 Identities=12% Similarity=0.022 Sum_probs=49.8
Q ss_pred EEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC---CC----
Q psy14549 28 IVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD---TQ---- 100 (117)
Q Consensus 28 ~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~---~~---- 100 (117)
.++.+..+..+....-....... ......+...++.+.+ . ....+|.|++||||+.+.+..+..- .+
T Consensus 50 ~~i~FsWPS~g~~~~Y~~d~~~a---~~s~~~l~~~L~~L~~-~--~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~ 123 (233)
T PF05990_consen 50 VVILFSWPSDGSLLGYFYDRESA---RFSGPALARFLRDLAR-A--PGIKRIHILAHSMGNRVLLEALRQLASEGERPDV 123 (233)
T ss_pred eEEEEEcCCCCChhhhhhhhhhH---HHHHHHHHHHHHHHHh-c--cCCceEEEEEeCchHHHHHHHHHHHHhcccchhh
Confidence 78888888665421111111000 1124555666666666 3 2457999999999999998876551 02
Q ss_pred -CceEEEEeeCCCCCC
Q psy14549 101 -NVFKCGVSVAPVTNF 115 (117)
Q Consensus 101 -~~~~~~v~~~~~~~~ 115 (117)
..|..++..+|-+|.
T Consensus 124 ~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 124 KARFDNVILAAPDIDN 139 (233)
T ss_pred HhhhheEEEECCCCCH
Confidence 256788888886653
No 172
>PLN02454 triacylglycerol lipase
Probab=96.52 E-value=0.0073 Score=43.46 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 59 DQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
++...++.+.+.++. .+-+|.++|||+||.+|+..+..
T Consensus 211 qvl~~V~~l~~~Yp~-~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKD-EKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCC-CCceEEEEecCHHHHHHHHHHHH
Confidence 344555555553432 22359999999999999888743
No 173
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.50 E-value=0.019 Score=41.37 Aligned_cols=82 Identities=6% Similarity=-0.053 Sum_probs=50.2
Q ss_pred hhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC---
Q psy14549 22 VSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD--- 98 (117)
Q Consensus 22 ~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~--- 98 (117)
+.+ |+.|...|..-......+ .++ ...+|....+..+.+. +- .++.++|.|+||.+++.+++..
T Consensus 126 Ll~-g~dVYl~DW~~p~~vp~~-----~~~---f~ldDYi~~l~~~i~~---~G-~~v~l~GvCqgG~~~laa~Al~a~~ 192 (406)
T TIGR01849 126 LLP-DHDVYITDWVNARMVPLS-----AGK---FDLEDYIDYLIEFIRF---LG-PDIHVIAVCQPAVPVLAAVALMAEN 192 (406)
T ss_pred HhC-CCcEEEEeCCCCCCCchh-----cCC---CCHHHHHHHHHHHHHH---hC-CCCcEEEEchhhHHHHHHHHHHHhc
Confidence 335 999999997755432110 111 1244444433333332 22 2399999999999965443331
Q ss_pred -CCCceEEEEeeCCCCCCC
Q psy14549 99 -TQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 99 -~~~~~~~~v~~~~~~~~~ 116 (117)
.|..++.++.+++++|+.
T Consensus 193 ~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 193 EPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred CCCCCcceEEEEecCccCC
Confidence 145699999999999975
No 174
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.39 E-value=0.011 Score=38.76 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=44.7
Q ss_pred cCCeEEEEECCCCCCC-CCh-hhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 24 KRHVIVVHIDARGSAY-RSK-EQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~-~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
+.-..|.+|=||-..- +.. ...... .......-.|+.++.++-.++.. +...+.+.|||+|+.+...++...
T Consensus 43 ~~~~~vfAP~YRQatl~~~~~~~~~~~-~~a~~~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 43 NGVCNVFAPRYRQATLYAFLDTDREDA-EKAFDLAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hcCCccccChhhcchhhhhhccCcchh-HHHHHhhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3456678888884321 111 001111 11112337889999998777532 334799999999999999998763
No 175
>KOG3975|consensus
Probab=96.33 E-value=0.057 Score=36.61 Aligned_cols=50 Identities=18% Similarity=0.238 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC--ceEEEEeeCCC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN--VFKCGVSVAPV 112 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~--~~~~~v~~~~~ 112 (117)
+.-=++++++..+ ...|+.++|||-|+++.+.++... .. .+..|+.+-|+
T Consensus 95 V~HKlaFik~~~P--k~~ki~iiGHSiGaYm~Lqil~~~-k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 95 VDHKLAFIKEYVP--KDRKIYIIGHSIGAYMVLQILPSI-KLVFSVQKAVLLFPT 146 (301)
T ss_pred HHHHHHHHHHhCC--CCCEEEEEecchhHHHHHHHhhhc-ccccceEEEEEecch
Confidence 3345666666444 235899999999999999998753 22 35666666664
No 176
>PLN02408 phospholipase A1
Probab=96.19 E-value=0.014 Score=41.44 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=23.4
Q ss_pred HHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 62 AVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 62 ~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
+.++.+.+.++. ..-+|.++|||+||.+|+.++..
T Consensus 186 ~eI~~ll~~y~~-~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 186 EEIARLLQSYGD-EPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHhcCC-CCceEEEeccchHHHHHHHHHHH
Confidence 444444443332 23469999999999999877665
No 177
>PLN02571 triacylglycerol lipase
Probab=96.13 E-value=0.015 Score=41.93 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
+.+.++.+.+.++. ..-+|.++|||+||.+|+..+..
T Consensus 210 vl~eV~~L~~~y~~-e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 210 VLNEVGRLVEKYKD-EEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHhcCc-ccccEEEeccchHHHHHHHHHHH
Confidence 44444444443331 22379999999999999887654
No 178
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.09 E-value=0.018 Score=39.00 Aligned_cols=55 Identities=20% Similarity=0.189 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCC----CceEEEEeeCCCCC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQ----NVFKCGVSVAPVTN 114 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~----~~~~~~v~~~~~~~ 114 (117)
...+..++.+|++++ +-.++=++||||||.....++..+.. +.++..|++++..|
T Consensus 119 s~wlk~~msyL~~~Y---~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SKWLKKAMSYLQKHY---NIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHhc---CCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 566788999999863 55789999999999999999888621 13677777776655
No 179
>PRK04940 hypothetical protein; Provisional
Probab=96.08 E-value=0.0088 Score=38.39 Aligned_cols=33 Identities=18% Similarity=0.133 Sum_probs=25.2
Q ss_pred CceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
+++.++|.|+||+.|.+++.++ . + .+|.+.|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~--g-~-~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC--G-I-RQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH--C-C-CEEEECCCC
Confidence 4699999999999999999988 2 3 344455543
No 180
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.02 E-value=0.027 Score=39.23 Aligned_cols=87 Identities=14% Similarity=0.116 Sum_probs=53.5
Q ss_pred EEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh---CCC---
Q psy14549 28 IVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT---DTQ--- 100 (117)
Q Consensus 28 ~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~---~~~--- 100 (117)
.++.+|.| |.|-|-......... ....+.|+..+++...++.|.....+..|+|.|+||..+-.++.. .+.
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~--d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~ 80 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTG--DISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 80 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccc--cHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccccc
Confidence 47888988 655553221111000 011246666666665555888888899999999999877555443 101
Q ss_pred ---CceEEEEeeCCCCCCC
Q psy14549 101 ---NVFKCGVSVAPVTNFL 116 (117)
Q Consensus 101 ---~~~~~~v~~~~~~~~~ 116 (117)
-.+++++.-.|.+|..
T Consensus 81 ~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 81 EPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred CCceeeeEEEeCCCCCCcc
Confidence 1467888877877653
No 181
>KOG3724|consensus
Probab=95.99 E-value=0.013 Score=45.31 Aligned_cols=38 Identities=21% Similarity=0.298 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhc---CCCC---CCceEEEecChHHHHHHHHHhh
Q psy14549 60 QIAVVKYLTERF---QFID---KTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 60 ~~~~~~~~~~~~---~~~d---~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
+..++.++++.+ +..+ +..|.++||||||.+|...+..
T Consensus 159 V~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 159 VNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred HHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 334555555431 1223 6679999999999999887665
No 182
>PLN02324 triacylglycerol lipase
Probab=95.97 E-value=0.02 Score=41.27 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
+...++.+.+.++. ..-+|.++|||+||.+|+..+.
T Consensus 199 Vl~eV~~L~~~Yp~-e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 199 VQGELKRLLELYKN-EEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHCCC-CCceEEEecCcHHHHHHHHHHH
Confidence 33444445443432 2247999999999999988764
No 183
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.85 E-value=0.032 Score=35.73 Aligned_cols=78 Identities=18% Similarity=0.172 Sum_probs=43.7
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh--CC---
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT--DT--- 99 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~--~~--- 99 (117)
....+..++|+-..... .+..... ..+.++...++...++.| ..|++++|+|+|+.++..++.. ..
T Consensus 38 ~~~~~~~V~YpA~~~~~-~y~~S~~-----~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~~ 108 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPN-SYGDSVA-----AGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPDV 108 (179)
T ss_dssp CEEEEEE--S---SCGG-SCHHHHH-----HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHHH
T ss_pred CeeEEEecCCCCCCCcc-cccccHH-----HHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChhh
Confidence 34666667788543321 1111111 125556666665555444 3699999999999999998877 10
Q ss_pred CCceEEEEeeCC
Q psy14549 100 QNVFKCGVSVAP 111 (117)
Q Consensus 100 ~~~~~~~v~~~~ 111 (117)
.+.+.+++.++-
T Consensus 109 ~~~I~avvlfGd 120 (179)
T PF01083_consen 109 ADRIAAVVLFGD 120 (179)
T ss_dssp HHHEEEEEEES-
T ss_pred hhhEEEEEEecC
Confidence 236788777763
No 184
>PLN02310 triacylglycerol lipase
Probab=95.84 E-value=0.053 Score=39.08 Aligned_cols=21 Identities=19% Similarity=0.234 Sum_probs=17.9
Q ss_pred CceEEEecChHHHHHHHHHhh
Q psy14549 77 TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
.+|.++|||+||.+|+..+..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 579999999999999877643
No 185
>KOG2931|consensus
Probab=95.73 E-value=0.12 Score=35.83 Aligned_cols=80 Identities=15% Similarity=0.079 Sum_probs=55.1
Q ss_pred CeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEE
Q psy14549 26 HVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKC 105 (117)
Q Consensus 26 g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~ 105 (117)
.|++.-+|.+|+-.-...+.+. +.--.++++++-+..+.+. +....|.-+|--.|+++-.+++..+ |+++-+
T Consensus 78 ~fcv~HV~~PGqe~gAp~~p~~----y~yPsmd~LAd~l~~VL~~---f~lk~vIg~GvGAGAyIL~rFAl~h-p~rV~G 149 (326)
T KOG2931|consen 78 HFCVYHVDAPGQEDGAPSFPEG----YPYPSMDDLADMLPEVLDH---FGLKSVIGMGVGAGAYILARFALNH-PERVLG 149 (326)
T ss_pred heEEEecCCCccccCCccCCCC----CCCCCHHHHHHHHHHHHHh---cCcceEEEecccccHHHHHHHHhcC-hhheeE
Confidence 4999999999975432222111 1001145555555555553 2335788899999999999999999 999999
Q ss_pred EEeeCCCC
Q psy14549 106 GVSVAPVT 113 (117)
Q Consensus 106 ~v~~~~~~ 113 (117)
.|.+.+.+
T Consensus 150 LvLIn~~~ 157 (326)
T KOG2931|consen 150 LVLINCDP 157 (326)
T ss_pred EEEEecCC
Confidence 99887754
No 186
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.73 E-value=0.13 Score=32.52 Aligned_cols=73 Identities=14% Similarity=-0.015 Sum_probs=42.1
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHH-HHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC--CC
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQI-AVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD--TQ 100 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~--~~ 100 (117)
...+.|+.++.+|.+...... ....+.. ...+.+.... ...++.++|||+||.++..++.+. .+
T Consensus 23 ~~~~~v~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~l~~~~---~~~~~~l~g~s~Gg~~a~~~a~~l~~~~ 89 (212)
T smart00824 23 RGRRDVSALPLPGFGPGEPLP----------ASADALVEAQAEAVLRAA---GGRPFVLVGHSSGGLLAHAVAARLEARG 89 (212)
T ss_pred CCCccEEEecCCCCCCCCCCC----------CCHHHHHHHHHHHHHHhc---CCCCeEEEEECHHHHHHHHHHHHHHhCC
Confidence 356889999999886432211 0122222 2233333311 245789999999999998877752 03
Q ss_pred CceEEEEee
Q psy14549 101 NVFKCGVSV 109 (117)
Q Consensus 101 ~~~~~~v~~ 109 (117)
..+..++..
T Consensus 90 ~~~~~l~~~ 98 (212)
T smart00824 90 IPPAAVVLL 98 (212)
T ss_pred CCCcEEEEE
Confidence 345555443
No 187
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.72 E-value=0.1 Score=33.51 Aligned_cols=51 Identities=14% Similarity=0.080 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVA 110 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~ 110 (117)
..++...++-|.... ....++.++|||+|+.++...+... +..+.-++.+.
T Consensus 91 a~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~~-~~~vddvv~~G 141 (177)
T PF06259_consen 91 APRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQG-GLRVDDVVLVG 141 (177)
T ss_pred HHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhhC-CCCcccEEEEC
Confidence 455556666665533 3567999999999999999887774 44454444443
No 188
>PLN02802 triacylglycerol lipase
Probab=95.60 E-value=0.033 Score=41.13 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=17.8
Q ss_pred CceEEEecChHHHHHHHHHhh
Q psy14549 77 TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
-+|.|+|||+||.+|+..+..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 479999999999999876654
No 189
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.49 E-value=0.062 Score=38.13 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh----CC---CCceEEEEeeCCCCC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT----DT---QNVFKCGVSVAPVTN 114 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~----~~---~~~~~~~v~~~~~~~ 114 (117)
..+++..++++.++. ...+|.|+.||||.+++...+.+ .. +..|+-+|..+|=+|
T Consensus 174 r~aLe~~lr~La~~~---~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 174 RPALERLLRYLATDK---PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred HHHHHHHHHHHHhCC---CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 677888999998843 35799999999999999877655 10 124666777777555
No 190
>PLN02719 triacylglycerol lipase
Probab=95.48 E-value=0.04 Score=40.76 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcCC--CCCCceEEEecChHHHHHHHHHh
Q psy14549 60 QIAVVKYLTERFQF--IDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 60 ~~~~~~~~~~~~~~--~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
+.+.++.+.+.++. -...+|.++|||+||.+|+..+.
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 44445555443432 12348999999999999988764
No 191
>PLN00413 triacylglycerol lipase
Probab=95.47 E-value=0.041 Score=40.34 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
+...++.+.++. ...++.++|||+||.+|..++.
T Consensus 270 i~~~Lk~ll~~~---p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQN---PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHC---CCCeEEEEecCHHHHHHHHHHH
Confidence 444455444433 3458999999999999988764
No 192
>PLN02162 triacylglycerol lipase
Probab=95.46 E-value=0.079 Score=38.86 Aligned_cols=21 Identities=33% Similarity=0.321 Sum_probs=17.9
Q ss_pred CCceEEEecChHHHHHHHHHh
Q psy14549 76 KTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 76 ~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
..++.++|||+||.+|+.++.
T Consensus 277 ~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CceEEEEecChHHHHHHHHHH
Confidence 458999999999999988654
No 193
>PLN02761 lipase class 3 family protein
Probab=95.40 E-value=0.043 Score=40.65 Aligned_cols=38 Identities=21% Similarity=0.172 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhcC---CCCCCceEEEecChHHHHHHHHHh
Q psy14549 59 DQIAVVKYLTERFQ---FIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 59 d~~~~~~~~~~~~~---~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
++.+.++.+.+.++ .-...+|.++|||+||.+|+..+.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34455555544332 113347999999999999987764
No 194
>PLN02209 serine carboxypeptidase
Probab=95.35 E-value=0.035 Score=40.47 Aligned_cols=89 Identities=12% Similarity=0.168 Sum_probs=53.4
Q ss_pred CCeEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh----C-
Q psy14549 25 RHVIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT----D- 98 (117)
Q Consensus 25 ~g~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~----~- 98 (117)
+-..++.+|.+ |.|-|....... ... ...+++|+..+++...+..+.....++.|+|.|+||..+-.++.. .
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~-~~~-~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~ 193 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPIE-RTS-DTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNY 193 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCCC-ccC-CHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcc
Confidence 34568899977 666553221111 111 112245566665555444777777789999999999866555432 1
Q ss_pred ---CCC-ceEEEEeeCCCCCC
Q psy14549 99 ---TQN-VFKCGVSVAPVTNF 115 (117)
Q Consensus 99 ---~~~-~~~~~v~~~~~~~~ 115 (117)
.+. .+++++...|.+|+
T Consensus 194 ~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 194 ICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred cccCCceeeeeEEecCcccCh
Confidence 011 46888888888875
No 195
>KOG3967|consensus
Probab=95.34 E-value=0.15 Score=34.01 Aligned_cols=86 Identities=14% Similarity=0.110 Sum_probs=48.7
Q ss_pred hhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCC
Q psy14549 21 LVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQ 100 (117)
Q Consensus 21 ~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~ 100 (117)
.+.+.||-|+..|.--....-....+. ...-+..++-..-+..++.. + ...+.|+++-||+||..++.++.+. |
T Consensus 139 rAv~~Gygviv~N~N~~~kfye~k~np--~kyirt~veh~~yvw~~~v~--p-a~~~sv~vvahsyGG~~t~~l~~~f-~ 212 (297)
T KOG3967|consen 139 RAVAEGYGVIVLNPNRERKFYEKKRNP--QKYIRTPVEHAKYVWKNIVL--P-AKAESVFVVAHSYGGSLTLDLVERF-P 212 (297)
T ss_pred HHHHcCCcEEEeCCchhhhhhhcccCc--chhccchHHHHHHHHHHHhc--c-cCcceEEEEEeccCChhHHHHHHhc-C
Confidence 344689999988855221110000100 11111224444444444433 1 3668899999999999999999998 6
Q ss_pred C---ceEEEEeeCCC
Q psy14549 101 N---VFKCGVSVAPV 112 (117)
Q Consensus 101 ~---~~~~~v~~~~~ 112 (117)
+ .++.+...+++
T Consensus 213 ~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 213 DDESVFAIALTDSAM 227 (297)
T ss_pred CccceEEEEeecccc
Confidence 5 23444444443
No 196
>PLN02934 triacylglycerol lipase
Probab=95.33 E-value=0.043 Score=40.55 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
+...++.+.++.+ ..++.++|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p---~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHK---NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCC---CCeEEEeccccHHHHHHHHHH
Confidence 4444555544333 358999999999999988764
No 197
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.31 E-value=0.039 Score=40.16 Aligned_cols=89 Identities=13% Similarity=0.146 Sum_probs=52.5
Q ss_pred CCeEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh----CC
Q psy14549 25 RHVIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT----DT 99 (117)
Q Consensus 25 ~g~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~----~~ 99 (117)
+-..++.+|.+ |.|-|..........+ ...++++..+++...++.+.....++.|+|.|+||..+-.++.. ..
T Consensus 114 ~~anllfiDqPvGtGfSy~~~~~~~~~d--~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~ 191 (433)
T PLN03016 114 KMANIIFLDQPVGSGFSYSKTPIDKTGD--ISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNY 191 (433)
T ss_pred hcCcEEEecCCCCCCccCCCCCCCccCC--HHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcc
Confidence 34678899977 6665532211110000 01234555555544444777677889999999999866555433 10
Q ss_pred -----CCceEEEEeeCCCCCC
Q psy14549 100 -----QNVFKCGVSVAPVTNF 115 (117)
Q Consensus 100 -----~~~~~~~v~~~~~~~~ 115 (117)
+-.+++++.-.|.+|.
T Consensus 192 ~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 192 ICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred cccCCcccceeeEecCCCcCc
Confidence 1147788888887765
No 198
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.18 E-value=0.085 Score=35.83 Aligned_cols=60 Identities=22% Similarity=0.194 Sum_probs=40.3
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhH-HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIAD-QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
.-..|+..+.+|.+...... ...++ +...++.+++.+|. -.+.+.|+|+||.++..++.+
T Consensus 25 ~~~~v~~l~a~g~~~~~~~~----------~~l~~~a~~yv~~Ir~~QP~---GPy~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 25 PLLPVYGLQAPGYGAGEQPF----------ASLDDMAAAYVAAIRRVQPE---GPYVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred cCceeeccccCccccccccc----------CCHHHHHHHHHHHHHHhCCC---CCEEEEeeccccHHHHHHHHH
Confidence 44788899999876422111 11233 33566666664544 489999999999999998877
No 199
>KOG4569|consensus
Probab=95.17 E-value=0.054 Score=38.13 Aligned_cols=37 Identities=19% Similarity=0.239 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 58 ADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 58 ~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..+.+.++.+...++ .-+|.+.|||+||.+|..++..
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHH
Confidence 456677777766555 4589999999999999777654
No 200
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.08 E-value=0.076 Score=37.37 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=30.8
Q ss_pred CCCceEEEecChHHHHHHHHHhhCCC--CceEEEEeeCCC
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLATDTQ--NVFKCGVSVAPV 112 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~~~~--~~~~~~v~~~~~ 112 (117)
...++-++|||+||..+..++... + ..++.++.++++
T Consensus 125 ga~~v~LigHS~GG~~~ry~~~~~-~~~~~V~~~~tl~tp 163 (336)
T COG1075 125 GAKKVNLIGHSMGGLDSRYYLGVL-GGANRVASVVTLGTP 163 (336)
T ss_pred CCCceEEEeecccchhhHHHHhhc-CccceEEEEEEeccC
Confidence 347899999999999999888777 6 678888887764
No 201
>PLN02753 triacylglycerol lipase
Probab=94.92 E-value=0.075 Score=39.49 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=18.3
Q ss_pred CCceEEEecChHHHHHHHHHh
Q psy14549 76 KTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 76 ~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
.-+|.++|||+||.+|+..+.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred CceEEEEccCHHHHHHHHHHH
Confidence 358999999999999988764
No 202
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.75 E-value=0.035 Score=40.79 Aligned_cols=70 Identities=17% Similarity=0.242 Sum_probs=40.2
Q ss_pred CeEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCC--CceEEEecChHHHHHHHHHhh
Q psy14549 26 HVIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDK--TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 26 g~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~--~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
.-.+|.+|++ |.|-|...-.+....+.+ .-.|+..+.+.+.+..++..+ ++..|+|.|+||.-+..++..
T Consensus 146 ~adLvFiDqPvGTGfS~a~~~e~~~d~~~--~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~ 218 (498)
T COG2939 146 FADLVFIDQPVGTGFSRALGDEKKKDFEG--AGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHE 218 (498)
T ss_pred CCceEEEecCcccCcccccccccccchhc--cchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHH
Confidence 3457788866 666654311222222221 245566555555443333333 489999999999988666654
No 203
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.64 E-value=0.093 Score=38.95 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=17.9
Q ss_pred CceEEEecChHHHHHHHHHhh
Q psy14549 77 TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
-+|.|+|||+||.+|+..+..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999877643
No 204
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=94.22 E-value=0.095 Score=34.51 Aligned_cols=21 Identities=29% Similarity=0.483 Sum_probs=17.4
Q ss_pred CCceEEEecChHHHHHHHHHh
Q psy14549 76 KTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 76 ~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
..+|.++|||+||.++-.++.
T Consensus 77 ~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccceEEEecccHHHHHHHHH
Confidence 368999999999999866555
No 205
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=93.95 E-value=0.16 Score=38.47 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
...+...++.+.+.. ...||.|+||||||.+++.++..
T Consensus 196 F~rLK~lIE~ay~~n---ggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 196 LSRLKSNIELMVATN---GGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHHHHHc---CCCeEEEEEeCCchHHHHHHHHh
Confidence 444566666655421 24699999999999999988763
No 206
>PLN02847 triacylglycerol lipase
Probab=93.59 E-value=0.19 Score=38.07 Aligned_cols=21 Identities=33% Similarity=0.390 Sum_probs=17.7
Q ss_pred CceEEEecChHHHHHHHHHhh
Q psy14549 77 TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
-++.++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999766554
No 207
>KOG4388|consensus
Probab=93.48 E-value=0.14 Score=38.76 Aligned_cols=83 Identities=11% Similarity=-0.005 Sum_probs=53.0
Q ss_pred CCCCCccccccccccchhhHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHh---cCCCCCC
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTER---FQFIDKT 77 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~d~~ 77 (117)
|||....-..+ -.-.+..+.+.+.|+-|+.+||..-.+.+- ....+++--+.-|+.++ .+. .-+
T Consensus 403 HGGGfVAqsSk-SHE~YLr~Wa~aL~cPiiSVdYSLAPEaPF-----------PRaleEv~fAYcW~inn~allG~-TgE 469 (880)
T KOG4388|consen 403 HGGGFVAQSSK-SHEPYLRSWAQALGCPIISVDYSLAPEAPF-----------PRALEEVFFAYCWAINNCALLGS-TGE 469 (880)
T ss_pred cCCceeeeccc-cccHHHHHHHHHhCCCeEEeeeccCCCCCC-----------CcHHHHHHHHHHHHhcCHHHhCc-ccc
Confidence 66655543222 223355555667899999999986554321 12256666677777665 332 678
Q ss_pred ceEEEecChHHHHHHHHHh
Q psy14549 78 KVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 78 ~i~i~G~S~Gg~~a~~~~~ 96 (117)
||.+.|.|.||.+..-.+.
T Consensus 470 riv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred eEEEeccCCCcceeehhHH
Confidence 9999999999987644433
No 208
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=93.02 E-value=0.46 Score=33.13 Aligned_cols=51 Identities=16% Similarity=0.057 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC-ceEEEEeeCCC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN-VFKCGVSVAPV 112 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~-~~~~~v~~~~~ 112 (117)
..-+.+++.++.+ ++. .+|+|+||..|+.+++.++... +. .+.+.|.+++-
T Consensus 177 ~ari~Aa~~~~~~-~~~---~~ivlIg~G~gA~~~~~~la~~-~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 177 FARIEAAIAFAQQ-QGG---KNIVLIGHGTGAGWAARYLAEK-PPPMPDALVLINAY 228 (310)
T ss_pred HHHHHHHHHHHHh-cCC---ceEEEEEeChhHHHHHHHHhcC-CCcccCeEEEEeCC
Confidence 3445567777766 432 3599999999999999999887 43 47888887763
No 209
>KOG2565|consensus
Probab=92.85 E-value=0.31 Score=35.06 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=52.2
Q ss_pred CeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEE
Q psy14549 26 HVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKC 105 (117)
Q Consensus 26 g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~ 105 (117)
-|-||+|..+|.|.|..... .- .....++.+++.+.-+ +.-++..|=|.-||.-++..++..+ |+.+.+
T Consensus 188 ~FEVI~PSlPGygwSd~~sk----~G---Fn~~a~ArvmrkLMlR---Lg~nkffiqGgDwGSiI~snlasLy-PenV~G 256 (469)
T KOG2565|consen 188 AFEVIAPSLPGYGWSDAPSK----TG---FNAAATARVMRKLMLR---LGYNKFFIQGGDWGSIIGSNLASLY-PENVLG 256 (469)
T ss_pred eEEEeccCCCCcccCcCCcc----CC---ccHHHHHHHHHHHHHH---hCcceeEeecCchHHHHHHHHHhhc-chhhhH
Confidence 47799999999999865321 11 2255566677766553 4557999999999999999999999 987655
Q ss_pred E
Q psy14549 106 G 106 (117)
Q Consensus 106 ~ 106 (117)
.
T Consensus 257 l 257 (469)
T KOG2565|consen 257 L 257 (469)
T ss_pred h
Confidence 3
No 210
>KOG1282|consensus
Probab=92.82 E-value=0.48 Score=34.85 Aligned_cols=88 Identities=15% Similarity=0.115 Sum_probs=51.1
Q ss_pred eEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHH-HHHHHHHHhcCCCCCCceEEEecChHHHHH----HHHHhhC--
Q psy14549 27 VIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQI-AVVKYLTERFQFIDKTKVGIWGWSYGGFAT----AMVLATD-- 98 (117)
Q Consensus 27 ~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a----~~~~~~~-- 98 (117)
.-++..|.| |.|-|-........ .-.+..+.|.- ...+|+.+ .|........|.|.|++|..+ ..+...+
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~k-fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~ 195 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEK-FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKK 195 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHh-ChhhcCCCeEEecccccceehHHHHHHHHhcccc
Confidence 347778877 54443221111011 11112245555 45566666 887788899999999999555 4444332
Q ss_pred --CC-CceEEEEeeCCCCCCC
Q psy14549 99 --TQ-NVFKCGVSVAPVTNFL 116 (117)
Q Consensus 99 --~~-~~~~~~v~~~~~~~~~ 116 (117)
.| -.+++.+.-.|++|..
T Consensus 196 ~~~~~iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 196 CCKPNINLKGYAIGNGLTDPE 216 (454)
T ss_pred ccCCcccceEEEecCcccCcc
Confidence 01 2478888888887753
No 211
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.36 E-value=0.63 Score=31.00 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=19.2
Q ss_pred CCCceEEEecChHHHHHHHHHhh
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..+++.|+|+|+|+.++...+.+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHH
Confidence 56789999999999999776554
No 212
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.30 E-value=0.46 Score=33.11 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=20.7
Q ss_pred CCCceEEEecChHHHHHHHHHhhC
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+|.+.|||.||.+|..+-.++
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCceEEEeccccchHHHHHhcccc
Confidence 346999999999999999887776
No 213
>KOG4540|consensus
Probab=92.30 E-value=0.46 Score=33.11 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=20.7
Q ss_pred CCCceEEEecChHHHHHHHHHhhC
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+|.+.|||.||.+|..+-.++
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCceEEEeccccchHHHHHhcccc
Confidence 346999999999999999887776
No 214
>COG3150 Predicted esterase [General function prediction only]
Probab=91.93 E-value=0.2 Score=32.04 Aligned_cols=21 Identities=24% Similarity=0.124 Sum_probs=19.3
Q ss_pred ceEEEecChHHHHHHHHHhhC
Q psy14549 78 KVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 78 ~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
+..|+|-|.||+.+.++..++
T Consensus 60 ~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 60 SPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred CceEEeecchHHHHHHHHHHh
Confidence 499999999999999998886
No 215
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=91.70 E-value=0.39 Score=34.83 Aligned_cols=66 Identities=18% Similarity=0.246 Sum_probs=45.8
Q ss_pred HhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 20 YLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 20 ~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..++++|+.||-+|-.-+.++.+.+. ....|+...+++-.. ++ ...++.++|.|+|+-+.-.+..+
T Consensus 281 ~~l~~~gvpVvGvdsLRYfW~~rtPe---------~~a~Dl~r~i~~y~~-~w--~~~~~~liGySfGADvlP~~~n~ 346 (456)
T COG3946 281 EALQKQGVPVVGVDSLRYFWSERTPE---------QIAADLSRLIRFYAR-RW--GAKRVLLIGYSFGADVLPFAYNR 346 (456)
T ss_pred HHHHHCCCceeeeehhhhhhccCCHH---------HHHHHHHHHHHHHHH-hh--CcceEEEEeecccchhhHHHHHh
Confidence 45668999999999665544443322 126778888888776 33 45799999999999876444333
No 216
>PF03283 PAE: Pectinacetylesterase
Probab=91.44 E-value=0.26 Score=35.19 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHH
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVL 95 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~ 95 (117)
...+.++++++.++ +.-+.++|.+.|.|.||.-++..+
T Consensus 137 ~~i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 137 YRILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHH
Confidence 56677899999984 444678999999999999986543
No 217
>KOG2369|consensus
Probab=91.36 E-value=0.45 Score=34.99 Aligned_cols=24 Identities=25% Similarity=0.228 Sum_probs=21.6
Q ss_pred CceEEEecChHHHHHHHHHhhCCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDTQN 101 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~~~ 101 (117)
.||.+++||||+.+.+.++... ++
T Consensus 182 kkVvlisHSMG~l~~lyFl~w~-~~ 205 (473)
T KOG2369|consen 182 KKVVLISHSMGGLYVLYFLKWV-EA 205 (473)
T ss_pred CceEEEecCCccHHHHHHHhcc-cc
Confidence 6999999999999999998877 55
No 218
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=90.37 E-value=2.1 Score=29.56 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=26.5
Q ss_pred CceEEEecChHHHHHHHHHhhCCCC-ceEEEEeeCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDTQN-VFKCGVSVAPV 112 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~~~-~~~~~v~~~~~ 112 (117)
+-+-++|+|.||.+.=.++.+. ++ .++-.|++++.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c-~~~~V~nlISlggp 115 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRC-NDPPVHNLISLGGP 115 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH--TSS-EEEEEEES--
T ss_pred cceeeeeeccccHHHHHHHHHC-CCCCceeEEEecCc
Confidence 5799999999999999998887 54 58888888764
No 219
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=89.97 E-value=0.093 Score=37.96 Aligned_cols=82 Identities=15% Similarity=0.011 Sum_probs=57.6
Q ss_pred eEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEE
Q psy14549 27 VIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCG 106 (117)
Q Consensus 27 ~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~ 106 (117)
-.-|.+.||-++.|...+.+..+-... ....|..++++.+++- =+.|..-.|.|=||+.++.+=..+ |+-+.+.
T Consensus 89 ~NQl~vEhRfF~~SrP~p~DW~~Lti~-QAA~D~Hri~~A~K~i----Y~~kWISTG~SKGGmTa~y~rrFy-P~DVD~t 162 (448)
T PF05576_consen 89 GNQLSVEHRFFGPSRPEPADWSYLTIW-QAASDQHRIVQAFKPI----YPGKWISTGGSKGGMTAVYYRRFY-PDDVDGT 162 (448)
T ss_pred cceEEEEEeeccCCCCCCCCcccccHh-HhhHHHHHHHHHHHhh----ccCCceecCcCCCceeEEEEeeeC-CCCCCee
Confidence 334577888888876654443332221 2378888888888773 346899999999999999886666 9888888
Q ss_pred EeeCCCCC
Q psy14549 107 VSVAPVTN 114 (117)
Q Consensus 107 v~~~~~~~ 114 (117)
|+...+.|
T Consensus 163 VaYVAP~~ 170 (448)
T PF05576_consen 163 VAYVAPND 170 (448)
T ss_pred eeeecccc
Confidence 77665544
No 220
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=89.02 E-value=1.1 Score=33.34 Aligned_cols=75 Identities=17% Similarity=0.109 Sum_probs=46.1
Q ss_pred EEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEe
Q psy14549 29 VVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVS 108 (117)
Q Consensus 29 vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~ 108 (117)
.+.-|.|-.|++.---.+. . -..+..+++...+..+ .+.+...+.|.|||.+-|+.+.++- ..+++|.
T Consensus 318 LL~~DpRleGGaFYlGs~e-------y-E~~I~~~I~~~L~~Lg-F~~~qLILSGlSMGTfgAlYYga~l---~P~AIiV 385 (511)
T TIGR03712 318 LLIGDPRLEGGAFYLGSDE-------Y-EQGIINVIQEKLDYLG-FDHDQLILSGLSMGTFGALYYGAKL---SPHAIIV 385 (511)
T ss_pred EEeeccccccceeeeCcHH-------H-HHHHHHHHHHHHHHhC-CCHHHeeeccccccchhhhhhcccC---CCceEEE
Confidence 5566777666543211100 0 1224444444444233 5888999999999999999998876 2356666
Q ss_pred eCCCCCC
Q psy14549 109 VAPVTNF 115 (117)
Q Consensus 109 ~~~~~~~ 115 (117)
-=|++|+
T Consensus 386 gKPL~NL 392 (511)
T TIGR03712 386 GKPLVNL 392 (511)
T ss_pred cCcccch
Confidence 6677664
No 221
>KOG2029|consensus
Probab=89.01 E-value=1.5 Score=33.49 Aligned_cols=68 Identities=16% Similarity=0.162 Sum_probs=36.9
Q ss_pred CCeEEEEECCCCCCCCChh--hhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 25 RHVIVVHIDARGSAYRSKE--QEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
.++.++..+|+..--.+.. +.+...+.. ..-..+.++.+.. ..--|...|..+||||||.++=.++..
T Consensus 477 p~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl----~~Rs~~lleql~~-~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 477 PKSRIIGLEYTTSITDWRARCPAEAHRRSL----AARSNELLEQLQA-AGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred ccceEEEeecccchhhhcccCcccchhhHH----HHHHHHHHHHHHH-hccCCCCceEEEecccchHHHHHHHHH
Confidence 4588899998863211111 111001100 1112244555544 443467789999999999988655544
No 222
>PLN02633 palmitoyl protein thioesterase family protein
Probab=88.51 E-value=2.2 Score=29.98 Aligned_cols=35 Identities=17% Similarity=0.076 Sum_probs=29.6
Q ss_pred CceEEEecChHHHHHHHHHhhCCCC--ceEEEEeeCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDTQN--VFKCGVSVAPV 112 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~~~--~~~~~v~~~~~ 112 (117)
+-+-++|+|.||.+.=.++.+. |+ .++-.|++++.
T Consensus 94 ~G~naIGfSQGGlflRa~ierc-~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFC-DGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHC-CCCCCcceEEEecCC
Confidence 3589999999999999999988 65 48888888764
No 223
>PLN02606 palmitoyl-protein thioesterase
Probab=87.61 E-value=2.7 Score=29.42 Aligned_cols=35 Identities=17% Similarity=0.008 Sum_probs=29.5
Q ss_pred CceEEEecChHHHHHHHHHhhCCCC--ceEEEEeeCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDTQN--VFKCGVSVAPV 112 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~~~--~~~~~v~~~~~ 112 (117)
+-+-++|+|.||.+.=.++.+. |+ .++-.|++++.
T Consensus 95 ~G~naIGfSQGglflRa~ierc-~~~p~V~nlISlggp 131 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFC-DNAPPVINYVSLGGP 131 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHC-CCCCCcceEEEecCC
Confidence 4689999999999999999998 65 48888888764
No 224
>KOG2551|consensus
Probab=87.39 E-value=3.1 Score=27.84 Aligned_cols=51 Identities=22% Similarity=0.232 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC--C-----CCceEEEEeeCCCCCC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD--T-----QNVFKCGVSVAPVTNF 115 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~--~-----~~~~~~~v~~~~~~~~ 115 (117)
+..+.++++++-| . =+|+|+|.|+.++..++... . .+.|+-+|.++|..-+
T Consensus 92 l~yl~~~i~enGP-F----DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 92 LEYLEDYIKENGP-F----DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred HHHHHHHHHHhCC-C----ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 4556666666333 3 36999999999999988721 0 1246888988886543
No 225
>KOG1283|consensus
Probab=87.24 E-value=0.76 Score=32.52 Aligned_cols=71 Identities=17% Similarity=0.216 Sum_probs=45.9
Q ss_pred CeEEEEECCC-CCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 26 HVIVVHIDAR-GSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 26 g~~vv~~d~r-g~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
-..++.+|-+ |.|-|.-+-. ..+..-......|+.+.++.+..+.+.....+..|+..|+||-++..++..
T Consensus 71 ~adllfvDnPVGaGfSyVdg~-~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGS-SAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred hccEEEecCCCcCceeeecCc-ccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 3456777766 6554432211 111111112267777888777776778888999999999999999776554
No 226
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=86.67 E-value=5.2 Score=27.44 Aligned_cols=38 Identities=13% Similarity=0.341 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
...+..+..++.++. -..++|.++|+|.|++.+-.++.
T Consensus 74 ~~~I~~ay~~l~~~~--~~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 74 EARIRDAYRFLSKNY--EPGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred HHHHHHHHHHHHhcc--CCcceEEEEecCccHHHHHHHHH
Confidence 455667777776644 24567999999999999866543
No 227
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=85.76 E-value=1.8 Score=28.69 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=26.1
Q ss_pred CceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVT 113 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~ 113 (117)
.+|.++++|||=+.|..++... .++..+++.|..
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~---~~~~aiAINGT~ 90 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGI---PFKRAIAINGTP 90 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccC---CcceeEEEECCC
Confidence 4799999999999998876543 366777777643
No 228
>KOG3253|consensus
Probab=85.74 E-value=2.3 Score=32.73 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=51.8
Q ss_pred CCCCCccccccccccchhhHhh-hcCCeEEEEECCCC-CCCCChhhhHhhhhcCCCcchhHHHHHHHHHH-HhcCCCCCC
Q psy14549 1 YGGPGSNIISDRFSIDFHTYLV-SKRHVIVVHIDARG-SAYRSKEQEHSVYRNLGRYEIADQIAVVKYLT-ERFQFIDKT 77 (117)
Q Consensus 1 ~gGp~~~~~~~~~~~~~~~~~~-a~~g~~vv~~d~rg-~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~d~~ 77 (117)
||+|... ....|...|...+- ..+=.-|.++|++. .++- ...+. .+-...+.++.. +..+..-..
T Consensus 183 ps~p~ap-~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~--nI~h~---------ae~~vSf~r~kvlei~gefpha 250 (784)
T KOG3253|consen 183 PSTPLAP-KTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGA--NIKHA---------AEYSVSFDRYKVLEITGEFPHA 250 (784)
T ss_pred cCCCCCC-ccchHHHhHHHHHhhhceeeeeccccccCCCCCc--chHHH---------HHHHHHHhhhhhhhhhccCCCC
Confidence 4555322 34556666654332 22334566677663 3321 10110 222344444322 114445557
Q ss_pred ceEEEecChHHHHHHHHHhhCCCC-ceEEEEeeC
Q psy14549 78 KVGIWGWSYGGFATAMVLATDTQN-VFKCGVSVA 110 (117)
Q Consensus 78 ~i~i~G~S~Gg~~a~~~~~~~~~~-~~~~~v~~~ 110 (117)
.|.++|+|||+.++.+....+ .+ .++++|++.
T Consensus 251 ~IiLvGrsmGAlVachVSpsn-sdv~V~~vVCig 283 (784)
T KOG3253|consen 251 PIILVGRSMGALVACHVSPSN-SDVEVDAVVCIG 283 (784)
T ss_pred ceEEEecccCceeeEEecccc-CCceEEEEEEec
Confidence 899999999988877776665 44 377777765
No 229
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=83.52 E-value=3.8 Score=29.18 Aligned_cols=38 Identities=13% Similarity=0.387 Sum_probs=29.3
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
...+.++.+++.+++. --++|.++|+|-|++.+-.++.
T Consensus 104 ~~nI~~AYrFL~~~ye--pGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 104 VQNIREAYRFLIFNYE--PGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHHHHHHHHhcC--CCCeEEEeeccchhHHHHHHHH
Confidence 5667788888888632 3468999999999999866554
No 230
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=80.47 E-value=3.8 Score=28.44 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=32.6
Q ss_pred HHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC---ceEEEEeeCCC
Q psy14549 62 AVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN---VFKCGVSVAPV 112 (117)
Q Consensus 62 ~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~---~~~~~v~~~~~ 112 (117)
++.+.+.+ .+.-++.|+.++|.|.|++-+....... .+ .+.+++-..|+
T Consensus 95 aV~~~~~~-lP~~~RPkL~l~GeSLGa~g~~~af~~~-~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 95 AVYARWST-LPEDRRPKLYLYGESLGAYGGEAAFDGL-DDLRDRVDGALWVGPP 146 (289)
T ss_pred HHHHHHHh-CCcccCCeEEEeccCccccchhhhhccH-HHhhhhcceEEEeCCC
Confidence 44444555 7777899999999999999887654432 22 35555555543
No 231
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=79.69 E-value=11 Score=27.02 Aligned_cols=37 Identities=16% Similarity=0.099 Sum_probs=25.7
Q ss_pred CCceEEEecChHHHHHHHHHhhCCC-----CceEEEEeeCCCC
Q psy14549 76 KTKVGIWGWSYGGFATAMVLATDTQ-----NVFKCGVSVAPVT 113 (117)
Q Consensus 76 ~~~i~i~G~S~Gg~~a~~~~~~~~~-----~~~~~~v~~~~~~ 113 (117)
..+|.++|||+|+.+...++..- . .++.-++.+..++
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L-~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLEL-AERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHH-HhccccCeEeeEEEecCCC
Confidence 34699999999999987666553 2 2466666666543
No 232
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=78.03 E-value=11 Score=23.76 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=21.1
Q ss_pred CCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCC
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAP 111 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~ 111 (117)
+..+|+++|-|..|.+-+.++... ++.+..++-..|
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~-~~~I~~vvD~np 102 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLD-NDLIDYVVDDNP 102 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT---TTTS--EEES-G
T ss_pred cCCEEEEECcchHHHHHHHHhCCC-cceeEEEEeCCh
Confidence 446899999999999999998877 677887776544
No 233
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=77.81 E-value=9.7 Score=21.07 Aligned_cols=42 Identities=17% Similarity=0.066 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+.+-++|++++...-.+.++.|+|-|-|=.++..++..+
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 344566677777632222457899999999988888777764
No 234
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=74.27 E-value=14 Score=24.70 Aligned_cols=30 Identities=7% Similarity=0.008 Sum_probs=18.7
Q ss_pred hhHHHHHHHHHHHhcC---CCCCCceEEEecCh
Q psy14549 57 IADQIAVVKYLTERFQ---FIDKTKVGIWGWSY 86 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~---~~d~~~i~i~G~S~ 86 (117)
..-++.+++|+....+ ......++++|.|-
T Consensus 106 pg~LKNaiDwls~~~~~~~~~~~KpvaivgaSg 138 (219)
T TIGR02690 106 TGSQKDQIDWIPLSVGPVRPTQGKTLAVMQVSG 138 (219)
T ss_pred CHHHHHHHHhcccCcccccccCCCcEEEEEeCC
Confidence 3446778888865211 13455789999883
No 235
>KOG2541|consensus
Probab=70.18 E-value=33 Score=23.94 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=25.9
Q ss_pred CCceEEEecChHHHHHHHHHhhCCCC-ceEEEEeeCC
Q psy14549 76 KTKVGIWGWSYGGFATAMVLATDTQN-VFKCGVSVAP 111 (117)
Q Consensus 76 ~~~i~i~G~S~Gg~~a~~~~~~~~~~-~~~~~v~~~~ 111 (117)
++-+-++|.|.||.++-.++... ++ .++-.|++++
T Consensus 91 sqGynivg~SQGglv~Raliq~c-d~ppV~n~ISL~g 126 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFC-DNPPVKNFISLGG 126 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhC-CCCCcceeEeccC
Confidence 45688999999999998877765 32 4566666654
No 236
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=67.89 E-value=30 Score=22.83 Aligned_cols=80 Identities=9% Similarity=-0.037 Sum_probs=42.8
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh----CC
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT----DT 99 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~----~~ 99 (117)
+.|+.++..-.+-..-.... . ....-...+++.+.+ ....++.++.+=.+|+||...+..+.. ..
T Consensus 25 ~~g~~il~~~~~~~~~~~~~------~----~~~~~~~~l~~~l~~-~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~ 93 (240)
T PF05705_consen 25 DPGFDILLVTSPPADFFWPS------K----RLAPAADKLLELLSD-SQSASPPPILFHSFSNGGSFLYSQLLEAYQSRK 93 (240)
T ss_pred hcCCeEEEEeCCHHHHeeec------c----chHHHHHHHHHHhhh-hccCCCCCEEEEEEECchHHHHHHHHHHHHhcc
Confidence 58999888875532111100 0 001222234444444 332233489999999988887665552 10
Q ss_pred -----CCceEEEEeeCCCCC
Q psy14549 100 -----QNVFKCGVSVAPVTN 114 (117)
Q Consensus 100 -----~~~~~~~v~~~~~~~ 114 (117)
-+.+++.|..|.+..
T Consensus 94 ~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 94 KFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred cccccccccceeEEeCCCCc
Confidence 123788887776543
No 237
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=65.44 E-value=34 Score=26.64 Aligned_cols=38 Identities=29% Similarity=0.177 Sum_probs=30.5
Q ss_pred eEEEecChHHHHHHHHHhhCCCCceEEEEeeCCCCCCC
Q psy14549 79 VGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFL 116 (117)
Q Consensus 79 i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~~~~~ 116 (117)
|...+-|.||..++..+.++...+|.+++..-|-++.+
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 44558899999999999998334789999888877754
No 238
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=64.75 E-value=22 Score=22.74 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=33.5
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHH
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATA 92 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~ 92 (117)
.......|+++++|.|.++- ..-++.+++|+-. .. ....++.+++.|.|+.-..
T Consensus 63 ~~i~~aD~li~~tPeYn~s~------------------pg~lKnaiD~l~~-~~-~~~Kpv~~~~~s~g~~~~~ 116 (184)
T COG0431 63 EAIAAADGLIIATPEYNGSY------------------PGALKNAIDWLSR-EA-LGGKPVLLLGTSGGGAGGL 116 (184)
T ss_pred HHHHhCCEEEEECCccCCCC------------------CHHHHHHHHhCCH-hH-hCCCcEEEEecCCCchhHH
Confidence 34445577888888877531 2336777888766 32 3455777777776665554
No 239
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=64.45 E-value=49 Score=23.55 Aligned_cols=40 Identities=20% Similarity=0.097 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcCCC-CCCceEEEecChHHHHHHHHHhhC
Q psy14549 59 DQIAVVKYLTERFQFI-DKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~-d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
.+..-++|.+..-+.. -+.||.|+|-|.|=.++..++..+
T Consensus 23 nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaF 63 (398)
T COG3007 23 NVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAF 63 (398)
T ss_pred HHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHh
Confidence 3556677777743333 577899999999999999998876
No 240
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=62.13 E-value=7.6 Score=24.43 Aligned_cols=37 Identities=16% Similarity=0.282 Sum_probs=24.0
Q ss_pred CCcchhHHHHHH----HHHHHhc-CCCCCCceEEEecChHHH
Q psy14549 53 GRYEIADQIAVV----KYLTERF-QFIDKTKVGIWGWSYGGF 89 (117)
Q Consensus 53 ~~~~~~d~~~~~----~~~~~~~-~~~d~~~i~i~G~S~Gg~ 89 (117)
......+++..+ +.++++. ....+++|.++|.|++..
T Consensus 75 ~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 75 AGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp TTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 445577777777 6666542 345788999999999887
No 241
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=60.82 E-value=18 Score=23.29 Aligned_cols=30 Identities=17% Similarity=0.419 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEEecC-hHHHHH
Q psy14549 59 DQIAVVKYLTERFQFIDKTKVGIWGWS-YGGFAT 91 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a 91 (117)
+...+++|.... +.-..|.|+||| .|+..+
T Consensus 66 ~~~asleyAv~~---L~v~~IvV~GHs~CGav~a 96 (182)
T cd00883 66 NCLSVLQYAVDV---LKVKHIIVCGHYGCGGVKA 96 (182)
T ss_pred chhhhHHHHHHh---cCCCEEEEecCCCchHHHH
Confidence 367888887663 455789999999 555444
No 242
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=58.78 E-value=22 Score=23.98 Aligned_cols=37 Identities=24% Similarity=0.228 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.++++...+..+. +.|-|.|+.++..++...
T Consensus 15 h~GVl~aL~e~g~~~~~d~--i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 15 HVGVAVCLKKYAPHLLLNK--ISGASAGALAACCLLCDL 51 (245)
T ss_pred HHHHHHHHHHhCcccCCCe--EEEEcHHHHHHHHHHhCC
Confidence 4567777777432222333 999999999999887764
No 243
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=58.49 E-value=51 Score=23.89 Aligned_cols=55 Identities=22% Similarity=0.151 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHh---cCCCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeC-CCCC
Q psy14549 58 ADQIAVVKYLTER---FQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVA-PVTN 114 (117)
Q Consensus 58 ~d~~~~~~~~~~~---~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~-~~~~ 114 (117)
.-...+++-+++- ...++.++..|.|.|==|..++..++.+ +++++++.+. .+.|
T Consensus 150 ka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D--~RV~aivP~Vid~LN 208 (367)
T PF10142_consen 150 KAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVD--PRVKAIVPIVIDVLN 208 (367)
T ss_pred HHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccC--cceeEEeeEEEccCC
Confidence 3344444444332 2345789999999999999999998876 5777777553 3433
No 244
>PLN03006 carbonate dehydratase
Probab=57.77 E-value=19 Score=25.29 Aligned_cols=30 Identities=17% Similarity=0.357 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecC-hHHHHHH
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWS-YGGFATA 92 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a~ 92 (117)
+.++++|.... +.-+.|.|+||| .||..++
T Consensus 158 ~~aSLEYAV~~---L~V~~IVV~GHs~CGaV~Aa 188 (301)
T PLN03006 158 TKAALEFSVNT---LNVENILVIGHSRCGGIQAL 188 (301)
T ss_pred hhhhHHHHHHH---hCCCEEEEecCCCchHHHHH
Confidence 56788887774 455789999999 5655543
No 245
>PLN03014 carbonic anhydrase
Probab=55.14 E-value=20 Score=25.70 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecC-hHHHHHH
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWS-YGGFATA 92 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a~ 92 (117)
+.++++|.... ++-..|.|+||| +||..++
T Consensus 206 v~asLEYAV~~---L~V~~IVV~GHs~CGaV~Aa 236 (347)
T PLN03014 206 VGAAIEYAVLH---LKVENIVVIGHSACGGIKGL 236 (347)
T ss_pred chhHHHHHHHH---hCCCEEEEeCCCCchHHHHH
Confidence 66788887774 455789999999 6665554
No 246
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.87 E-value=31 Score=23.04 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.+.+ .+ +.++.-.+.|-|.|+.++..++...
T Consensus 14 h~GVl~~L~e-~g-i~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 14 HLGVLSLLIE-AG-VINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHHH-cC-CCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 4567788877 44 3344568999999999999887764
No 247
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=53.36 E-value=8.5 Score=25.89 Aligned_cols=15 Identities=33% Similarity=0.543 Sum_probs=12.4
Q ss_pred CCCceEEEecChHHH
Q psy14549 75 DKTKVGIWGWSYGGF 89 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~ 89 (117)
+-..|.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 557899999999853
No 248
>KOG0256|consensus
Probab=53.16 E-value=37 Score=25.18 Aligned_cols=43 Identities=12% Similarity=-0.015 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhCCCC
Q psy14549 58 ADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQN 101 (117)
Q Consensus 58 ~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~ 101 (117)
+.++..+...+.+.-..|++|+++.+.+-+..-++.....+ |.
T Consensus 128 qa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLad-pg 170 (471)
T KOG0256|consen 128 QAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLAD-PG 170 (471)
T ss_pred HHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcC-CC
Confidence 33455555555545567999999999999999999988887 53
No 249
>PLN00416 carbonate dehydratase
Probab=52.32 E-value=27 Score=23.97 Aligned_cols=31 Identities=23% Similarity=0.301 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEEecC-hHHHHHH
Q psy14549 59 DQIAVVKYLTERFQFIDKTKVGIWGWS-YGGFATA 92 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a~ 92 (117)
+..++++|.... +.-..|.|+||| .||.-++
T Consensus 125 ~~~asLEyAv~~---L~V~~IVV~GHs~CGaV~Aa 156 (258)
T PLN00416 125 GVGAAVEYAVVH---LKVENILVIGHSCCGGIKGL 156 (258)
T ss_pred cchhHHHHHHHH---hCCCEEEEecCCCchHHHHH
Confidence 356788887774 455789999999 5655443
No 250
>PLN02154 carbonic anhydrase
Probab=51.50 E-value=31 Score=24.15 Aligned_cols=32 Identities=19% Similarity=0.406 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEEecC-hHHHHHHH
Q psy14549 59 DQIAVVKYLTERFQFIDKTKVGIWGWS-YGGFATAM 93 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a~~ 93 (117)
.+.++++|.... +.-..|.|+||| .||.-++.
T Consensus 151 ~~~aslEyAv~~---L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 151 ETNSALEFAVTT---LQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred chhhHHHHHHHH---hCCCEEEEecCCCchHHHHHH
Confidence 356788887664 455789999999 66655543
No 251
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=51.01 E-value=32 Score=22.33 Aligned_cols=30 Identities=20% Similarity=0.380 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecC-hHHHHHH
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWS-YGGFATA 92 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a~ 92 (117)
..+.++|.... +.-..|.|+||| .||.-+.
T Consensus 73 ~~asleyav~~---l~v~~ivV~GH~~Cgav~Aa 103 (190)
T cd00884 73 TSAAIEYAVAV---LKVEHIVVCGHSDCGGIRAL 103 (190)
T ss_pred hhhhHHHHHHH---hCCCEEEEeCCCcchHHHHH
Confidence 56788887664 455789999999 5554443
No 252
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=50.71 E-value=13 Score=25.78 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=17.2
Q ss_pred CceEEEecChHHHHHHHHHhh
Q psy14549 77 TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
.+-+++|||+|-+.++.++..
T Consensus 84 ~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 84 KPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp CESEEEESTTHHHHHHHHTTS
T ss_pred ccceeeccchhhHHHHHHCCc
Confidence 567799999999998877654
No 253
>PRK15219 carbonic anhydrase; Provisional
Probab=50.61 E-value=33 Score=23.32 Aligned_cols=31 Identities=13% Similarity=0.219 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHhcCCCCCCceEEEecC-hHHHHH
Q psy14549 58 ADQIAVVKYLTERFQFIDKTKVGIWGWS-YGGFAT 91 (117)
Q Consensus 58 ~d~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a 91 (117)
.++...++|.... ++-..|.|+||| .|+.-+
T Consensus 127 ~~~~~slEyAv~~---L~v~~IvVlGHt~CGav~A 158 (245)
T PRK15219 127 DDLLGSMEFACAV---AGAKVVLVMGHTACGAVKG 158 (245)
T ss_pred cchhhHHHHHHHH---cCCCEEEEecCCcchHHHH
Confidence 5677888888774 456789999999 555444
No 254
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=48.05 E-value=36 Score=24.01 Aligned_cols=23 Identities=13% Similarity=0.109 Sum_probs=18.9
Q ss_pred CCCceEEEecChHHHHHHHHHhh
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
.....++.|||.|=+.++.++..
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag~ 105 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAGV 105 (310)
T ss_pred CCCCceeecccHhHHHHHHHccc
Confidence 45677999999999999887653
No 255
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=45.31 E-value=68 Score=20.03 Aligned_cols=35 Identities=26% Similarity=0.182 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+++.+.+ .+ ...-.+.|-|.|+.++..++...
T Consensus 13 ~~Gvl~aL~e-~g---i~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 13 HVGVAKALRE-RG---PLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHHH-cC---CCCCEEEEECHHHHHHHHHHcCC
Confidence 4567777777 33 22566899999999998887754
No 256
>PLN03019 carbonic anhydrase
Probab=44.70 E-value=34 Score=24.41 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecC-hHHHHHH
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWS-YGGFATA 92 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a~ 92 (117)
+.++++|.... +.-..|.|+||| .||.-++
T Consensus 201 v~aSIEYAV~~---L~V~~IVV~GHs~CGaVkAa 231 (330)
T PLN03019 201 VGAAIEYAVLH---LKVENIVVIGHSACGGIKGL 231 (330)
T ss_pred cchhHHHHHHH---hCCCEEEEecCCCchHHHHH
Confidence 56788887764 455789999999 5655544
No 257
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=44.68 E-value=72 Score=19.48 Aligned_cols=30 Identities=13% Similarity=0.328 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHhcCCCCCCceEEEecC-hHHHH
Q psy14549 58 ADQIAVVKYLTERFQFIDKTKVGIWGWS-YGGFA 90 (117)
Q Consensus 58 ~d~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~ 90 (117)
.+..+.+.|.... +.-..|.|+||+ .|+.-
T Consensus 39 ~~~~~sle~av~~---l~v~~IiV~gHt~CGa~~ 69 (153)
T PF00484_consen 39 DSALASLEYAVYH---LGVKEIIVCGHTDCGAIK 69 (153)
T ss_dssp HHHHHHHHHHHHT---ST-SEEEEEEETT-HHHH
T ss_pred cchhhheeeeeec---CCCCEEEEEcCCCchHHH
Confidence 5667888887763 355789999999 45544
No 258
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=43.59 E-value=22 Score=24.11 Aligned_cols=21 Identities=14% Similarity=0.129 Sum_probs=16.9
Q ss_pred CceEEEecChHHHHHHHHHhh
Q psy14549 77 TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..-.++|||+|-+.++.++..
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCEEeecCHHHHHHHHHhCC
Confidence 456899999999988776654
No 259
>COG4003 Uncharacterized protein conserved in archaea [Function unknown]
Probab=43.42 E-value=30 Score=19.51 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHhcCCCCCCc
Q psy14549 57 IADQIAVVKYLTERFQFIDKTK 78 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~ 78 (117)
-++..++++|+.+ ++.+++++
T Consensus 47 ~EEAlEii~yleK-rGEi~~E~ 67 (98)
T COG4003 47 EEEALEIINYLEK-RGEITPEM 67 (98)
T ss_pred HHHHHHHHHHHHH-hCCCCHHH
Confidence 5677889999998 77776654
No 260
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=43.40 E-value=21 Score=22.93 Aligned_cols=34 Identities=3% Similarity=0.027 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
.+++...++|.+++ -...+|-|||++.++.++--
T Consensus 84 w~El~~i~dwa~~~-------v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 84 WEELTEILDWAKTH-------VTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred HHHHHHHHHHHHHh-------CcchHHHHHHHHHHHHHHcC
Confidence 45688999999874 25688889999999887643
No 261
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=43.29 E-value=66 Score=20.20 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecCh-HHHHH
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSY-GGFAT 91 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~-Gg~~a 91 (117)
..+..+.+.|.... +.-+.|.|+|||- |+..+
T Consensus 75 ~~~~~~sl~yav~~---l~v~~IvV~GHt~CG~~~a 107 (154)
T cd03378 75 DDDVLGSLEYAVEV---LGVPLVVVLGHESCGAVAA 107 (154)
T ss_pred ChhHHHHHHHHHHH---hCCCEEEEEcCCCccHHHH
Confidence 34566778877663 4557899999994 66443
No 262
>PRK10437 carbonic anhydrase; Provisional
Probab=42.99 E-value=52 Score=22.02 Aligned_cols=30 Identities=23% Similarity=0.471 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEEecC-hHHHHH
Q psy14549 59 DQIAVVKYLTERFQFIDKTKVGIWGWS-YGGFAT 91 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a 91 (117)
+...+++|.... +.-..|.|+||+ .|+..+
T Consensus 76 ~~~~~leyAV~~---L~v~~IvV~GHt~CG~V~A 106 (220)
T PRK10437 76 NCLSVVQYAVDV---LEVEHIIICGHYGCGGVQA 106 (220)
T ss_pred chHHHHHHHHHH---cCCCEEEEeCCCCchHHHH
Confidence 467788886663 355789999999 555444
No 263
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=42.87 E-value=56 Score=22.19 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.+.++.+.+-.+--.+.|-|.|+.++..++...
T Consensus 19 h~GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 19 HVGVASCLLEHAPFLVANARKIYGASAGALTATALVTGV 57 (249)
T ss_pred HHHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcCC
Confidence 456777777732222222355789999999999887654
No 264
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=42.49 E-value=61 Score=20.50 Aligned_cols=34 Identities=29% Similarity=0.244 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 61 IAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 61 ~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..+++.+++ .. +. .=.+.|-|.|+.++..++...
T Consensus 15 ~Gvl~~L~e-~~-~~--~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 15 IGALKALEE-AG-IL--KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHH-cC-CC--cceEEEECHHHHHHHHHHcCC
Confidence 467777766 32 22 367899999999998887654
No 265
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=42.35 E-value=43 Score=23.55 Aligned_cols=34 Identities=6% Similarity=-0.006 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..++...++|++++ .+.++|-|+|.++++.++.-
T Consensus 121 W~El~~i~~w~~~~-------~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 121 WDELKEILDWAKTH-------VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHHHc-------CCCEEEEcHHHHHHHHHcCC
Confidence 45688899998873 46789999999998876543
No 266
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=42.24 E-value=59 Score=22.10 Aligned_cols=21 Identities=29% Similarity=0.319 Sum_probs=16.9
Q ss_pred CceEEEecChHHHHHHHHHhh
Q psy14549 77 TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..-.++|||.|-+.++.++..
T Consensus 82 ~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 82 RPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred cccEEEecCHHHHHHHHHhCC
Confidence 356899999999999877654
No 267
>KOG1551|consensus
Probab=42.19 E-value=19 Score=25.13 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=18.8
Q ss_pred CCceEEEecChHHHHHHHHHhhC
Q psy14549 76 KTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 76 ~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
-.+..+.|-||||.++...-..+
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~~ 216 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSLH 216 (371)
T ss_pred cccceeeeeecccHHHHhhcccC
Confidence 45799999999999998875543
No 268
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=41.32 E-value=27 Score=23.92 Aligned_cols=21 Identities=29% Similarity=0.487 Sum_probs=17.3
Q ss_pred CceEEEecChHHHHHHHHHhh
Q psy14549 77 TKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
....++|||.|-+.++.++..
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred CCcEEeecCHHHHHHHHHhCC
Confidence 567899999999998877654
No 269
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.73 E-value=80 Score=21.70 Aligned_cols=39 Identities=21% Similarity=0.100 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+++.+.++.+.+...-=.+.|-|.||.++..++...
T Consensus 17 ~~~vL~~Le~~~~~~~~~fD~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 17 QLVLLKRLAEEFPSFLDQIDLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred HHHHHHHHHHhCcccccceeEEEEeCHHHHHHHHHHcCc
Confidence 345666666632221112236889999999999987653
No 270
>PRK10279 hypothetical protein; Provisional
Probab=38.50 E-value=61 Score=22.70 Aligned_cols=35 Identities=23% Similarity=0.228 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.+.+ .+ + ..-.|.|-|+|+.++..++...
T Consensus 20 hiGVL~aL~E-~g-i--~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 20 HIGVINALKK-VG-I--EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHH-cC-C--CcCEEEEEcHHHHHHHHHHcCC
Confidence 4567777777 33 2 3467899999999998887543
No 271
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.34 E-value=76 Score=21.56 Aligned_cols=39 Identities=21% Similarity=0.277 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.++++.+.+-+..-.+.|-|.|+..+..++...
T Consensus 15 h~GVl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~asg~ 53 (252)
T cd07221 15 HVGVTRCLSERAPHLLRDARMFFGASAGALHCVTFLSGL 53 (252)
T ss_pred HHHHHHHHHHhCcchhccCCEEEEEcHHHHHHHHHHhCC
Confidence 445677776632222223456999999999998887654
No 272
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=37.77 E-value=77 Score=23.19 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=15.4
Q ss_pred ceEEEecChH--HHHHHHHHhhCCCCceEEEEee
Q psy14549 78 KVGIWGWSYG--GFATAMVLATDTQNVFKCGVSV 109 (117)
Q Consensus 78 ~i~i~G~S~G--g~~a~~~~~~~~~~~~~~~v~~ 109 (117)
||+|+| |-| |..++....++ |++|+.....
T Consensus 3 ~VaILG-sTGSIG~~tL~vi~~~-p~~f~VvaLa 34 (385)
T PRK05447 3 RITILG-STGSIGTQTLDVIRRN-PDRFRVVALS 34 (385)
T ss_pred eEEEEc-CChHHHHHHHHHHHhC-ccccEEEEEE
Confidence 566676 444 33344445555 6665544433
No 273
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=37.19 E-value=1e+02 Score=19.18 Aligned_cols=35 Identities=31% Similarity=0.205 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+++.+.+ .. +. .-.+.|-|.|+.++..++...
T Consensus 15 ~~Gvl~~L~~-~~-~~--~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 15 HIGVLKALEE-AG-IP--IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHHH-cC-CC--eeEEEEECHHHHHHHHHHcCC
Confidence 3567777776 33 22 347999999999998887653
No 274
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=36.66 E-value=1.1e+02 Score=20.14 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
...+++.+.+ .+ ++ .-.+.|-|.|+.++..++...
T Consensus 15 ~~GvL~aL~e-~g-i~--~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 15 HLGFLAALLE-MG-LE--PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHHH-cC-CC--ceEEEEeCHHHHHHHHHHcCC
Confidence 4556777766 33 23 336999999999998887643
No 275
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=36.05 E-value=33 Score=24.20 Aligned_cols=19 Identities=16% Similarity=0.172 Sum_probs=15.4
Q ss_pred eEEEecChHHHHHHHHHhh
Q psy14549 79 VGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 79 i~i~G~S~Gg~~a~~~~~~ 97 (117)
-+++|||+|-+.++.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3689999999998777654
No 276
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=35.66 E-value=63 Score=21.35 Aligned_cols=31 Identities=10% Similarity=0.249 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHhcCCCCCCceEEEecC-hHHHHH
Q psy14549 58 ADQIAVVKYLTERFQFIDKTKVGIWGWS-YGGFAT 91 (117)
Q Consensus 58 ~d~~~~~~~~~~~~~~~d~~~i~i~G~S-~Gg~~a 91 (117)
.++.+.++|.... ++-..|.|+||+ .||.-+
T Consensus 76 ~~~l~sleyAv~~---L~v~~IiV~GH~~CGav~a 107 (207)
T COG0288 76 GSVLRSLEYAVYV---LGVKEIIVCGHTDCGAVKA 107 (207)
T ss_pred cchhHHHHHHHHH---cCCCEEEEecCCCcHHHHh
Confidence 5788888887774 456789999999 555443
No 277
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=35.23 E-value=34 Score=26.08 Aligned_cols=22 Identities=18% Similarity=-0.017 Sum_probs=18.2
Q ss_pred CceEEEecChHHHHHHHHHhhC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
.+-+++|||+|-+.++.++...
T Consensus 265 ~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 265 KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCCEEeecCHHHHHHHHHhCCC
Confidence 3458999999999998887764
No 278
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=34.99 E-value=88 Score=21.94 Aligned_cols=35 Identities=31% Similarity=0.304 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.+.+ .+ + .-=.|.|-|+|+.++..++...
T Consensus 30 hiGvL~aLee-~g-i--~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 30 HIGVIKALEE-AG-I--PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHHH-cC-C--CCCEEEEECHHHHHHHHHHcCC
Confidence 4567777777 43 2 2456889999999998887653
No 279
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=34.85 E-value=88 Score=21.02 Aligned_cols=38 Identities=26% Similarity=0.239 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCC-CCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQF-IDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~-~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.+++ .+. +-++--.+.|-|.|+.++..++...
T Consensus 14 h~GVl~~L~e-~g~~l~~~~~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 14 HVGVASALRE-HAPRLLQNARRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred HHHHHHHHHH-cCcccccCCCEEEEEcHHHHHHHHHHhCC
Confidence 4456777777 331 1111237999999999999887764
No 280
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=34.58 E-value=1.7 Score=28.90 Aligned_cols=21 Identities=33% Similarity=0.759 Sum_probs=13.9
Q ss_pred CCCceEEEecChHHHHHHHHH
Q psy14549 75 DKTKVGIWGWSYGGFATAMVL 95 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~ 95 (117)
+..++.++|.|+||..++...
T Consensus 158 ~~~~~~~~g~s~g~~~~~~~~ 178 (299)
T COG1073 158 DASRIVVWGESLGGALALLLL 178 (299)
T ss_pred HhhcccceeeccCceeecccc
Confidence 455677777777777766643
No 281
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=34.42 E-value=1.2e+02 Score=19.85 Aligned_cols=35 Identities=31% Similarity=0.283 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.+.+ .+. .--.+.|-|.|+.++..++...
T Consensus 13 ~~Gvl~aL~e-~g~---~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 13 QAGVLKALAE-AGI---EPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHHHH-cCC---CCCEEEEECHHHHHHHHHHcCC
Confidence 3457777777 332 3447899999999999988765
No 282
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=32.37 E-value=1.3e+02 Score=19.00 Aligned_cols=47 Identities=19% Similarity=0.140 Sum_probs=29.8
Q ss_pred cCCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChHHHH
Q psy14549 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFA 90 (117)
Q Consensus 24 ~~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~ 90 (117)
..|-.|++.|-+|-..+ +++++..++.+.. .+ ++=.+++|.|.|=.=
T Consensus 65 ~~~~~vi~Ld~~Gk~~s----------------Se~fA~~l~~~~~-~G---~~i~f~IGG~~Gl~~ 111 (155)
T COG1576 65 PKGSYVVLLDIRGKALS----------------SEEFADFLERLRD-DG---RDISFLIGGADGLSE 111 (155)
T ss_pred CCCCeEEEEecCCCcCC----------------hHHHHHHHHHHHh-cC---CeEEEEEeCcccCCH
Confidence 35767888888875443 4445556665555 32 455788898887433
No 283
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=32.15 E-value=70 Score=20.56 Aligned_cols=28 Identities=14% Similarity=0.065 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEEecChH
Q psy14549 59 DQIAVVKYLTERFQFIDKTKVGIWGWSYG 87 (117)
Q Consensus 59 d~~~~~~~~~~~~~~~d~~~i~i~G~S~G 87 (117)
+...+++-+.+ ...+.+..++++|.|-.
T Consensus 2 q~~~~~~El~~-~a~l~~g~i~VvGcSTS 29 (172)
T PF04260_consen 2 QLRQALEELLE-QANLKPGQIFVVGCSTS 29 (172)
T ss_dssp -HHHHHHHHHH-HS---TT-EEEEEE-HH
T ss_pred hHHHHHHHHHH-hcCCCCCCEEEEeeeHH
Confidence 34556666666 45568889999998853
No 284
>COG4425 Predicted membrane protein [Function unknown]
Probab=31.94 E-value=57 Score=24.65 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=25.0
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecChHHHHHHH
Q psy14549 61 IAVVKYLTERFQFIDKTKVGIWGWSYGGFATAM 93 (117)
Q Consensus 61 ~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~ 93 (117)
.++..+..+ .++-.+.|..+.|.|.|++....
T Consensus 382 ~aVy~yw~q-LP~~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 382 EAVYGYWTQ-LPKSSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred HHHHHHHHh-CCcCCCCceEEeccccccccCcc
Confidence 355556666 78888999999999999987644
No 285
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=31.40 E-value=48 Score=23.26 Aligned_cols=38 Identities=21% Similarity=0.154 Sum_probs=23.2
Q ss_pred HHHHHHHHHhcCC-CCCCceEEEecChHHHHHHHHHhhC
Q psy14549 61 IAVVKYLTERFQF-IDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 61 ~~~~~~~~~~~~~-~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..+++.+++..+. +-..-=.|.|-|.||.++..++...
T Consensus 15 i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 15 IQMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 4556666663121 0001135889999999999988643
No 286
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.36 E-value=40 Score=21.76 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=23.1
Q ss_pred ceEEEecChHHHHHHHHHhhCCCCceEEEEeeCC
Q psy14549 78 KVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAP 111 (117)
Q Consensus 78 ~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~ 111 (117)
.|.++.+|||=+++-.++.-. +++.++++.|
T Consensus 58 hirlvAwSMGVwvAeR~lqg~---~lksatAiNG 88 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGI---RLKSATAING 88 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhc---cccceeeecC
Confidence 467888899999998886544 4677777665
No 287
>PHA01735 hypothetical protein
Probab=31.13 E-value=68 Score=17.37 Aligned_cols=27 Identities=33% Similarity=0.388 Sum_probs=19.4
Q ss_pred CCcchhHHHHHHHHHHHhcCCCCCCceEEEe
Q psy14549 53 GRYEIADQIAVVKYLTERFQFIDKTKVGIWG 83 (117)
Q Consensus 53 ~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G 83 (117)
++....|..++++|++++ |-.-+.+-|
T Consensus 28 geATtaDL~AA~d~Lk~N----dItgv~~~g 54 (76)
T PHA01735 28 GEATTADLRAACDWLKSN----DITGVAVDG 54 (76)
T ss_pred CcccHHHHHHHHHHHHHC----CCceeeCCC
Confidence 456689999999999995 334455544
No 288
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=30.81 E-value=91 Score=20.04 Aligned_cols=27 Identities=19% Similarity=0.172 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChH
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYG 87 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~G 87 (117)
...+++-+.+ ...+.+..++++|.|-.
T Consensus 3 ~~~~~~El~~-~a~l~~g~i~VvGcSTS 29 (172)
T TIGR01440 3 LTTVLEELKD-ASNLKKGDLFVIGCSTS 29 (172)
T ss_pred HHHHHHHHHH-hhCCCCCCEEEEecchH
Confidence 4455666666 55578889999998853
No 289
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.60 E-value=99 Score=20.82 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcCC-CCCCceEEEecChHHHHHHHHHh
Q psy14549 60 QIAVVKYLTERFQF-IDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 60 ~~~~~~~~~~~~~~-~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
..-+++.+++ .+. +-+.--.+.|-|.|+.++..++.
T Consensus 14 hiGVl~~L~e-~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 14 HLGAAKALLR-HGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHHH-cCchhhccCCEEEEECHHHHHHHHHhc
Confidence 4567777777 332 11112369999999999998874
No 290
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=30.57 E-value=1.1e+02 Score=21.29 Aligned_cols=35 Identities=31% Similarity=0.186 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++-|.+ .+ ...-.|.|-|+|+.++..++...
T Consensus 26 hiGVl~aL~e-~g---i~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 26 HIGVLKALEE-AG---IPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHHH-cC---CCccEEEecCHHHHHHHHHHcCC
Confidence 3456666666 33 35677999999999998888754
No 291
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=30.20 E-value=1e+02 Score=21.22 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..-+++.+.+ .+ + .-=.|.|-|+|+.++..++..
T Consensus 25 hiGVL~aLeE-~g-i--~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 25 HIGILQALEE-AG-I--PIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHHH-cC-C--CccEEEEECHHHHHHHHHHcC
Confidence 3467777766 33 2 244688999999999888765
No 292
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=30.01 E-value=1.4e+02 Score=18.61 Aligned_cols=34 Identities=32% Similarity=0.248 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 61 IAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 61 ~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
.-+++.+++ .+ + .-=.+.|-|.|+.++..++...
T Consensus 16 ~Gvl~~L~e-~g-~--~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 16 IGVLRALEE-EG-I--EIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHHH-CC-C--CeeEEEEeCHHHHHHHHHHcCC
Confidence 456677766 33 2 2457899999999998887764
No 293
>KOG4372|consensus
Probab=29.24 E-value=15 Score=26.86 Aligned_cols=19 Identities=26% Similarity=0.459 Sum_probs=15.7
Q ss_pred CCceEEEecChHHHHHHHH
Q psy14549 76 KTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 76 ~~~i~i~G~S~Gg~~a~~~ 94 (117)
-++|..+|||.||..+..+
T Consensus 149 i~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYA 167 (405)
T ss_pred cceeeeeeeecCCeeeeEE
Confidence 3799999999999887443
No 294
>PRK13690 hypothetical protein; Provisional
Probab=29.24 E-value=1.1e+02 Score=19.86 Aligned_cols=30 Identities=13% Similarity=0.106 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChH
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYG 87 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~G 87 (117)
..+...+++-+.+ ...+.+..++++|.|-.
T Consensus 7 ~~~~~~~~~El~~-~a~l~~g~i~VvGcSTS 36 (184)
T PRK13690 7 KKQTRQILEELLE-QANLKPGQIFVLGCSTS 36 (184)
T ss_pred HHHHHHHHHHHHH-hhCCCCCCEEEEecchH
Confidence 3456667777777 55678899999998853
No 295
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.51 E-value=63 Score=19.69 Aligned_cols=22 Identities=23% Similarity=0.066 Sum_probs=16.4
Q ss_pred CceEEEecChHHHHHHHHHhhC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
.--.|.|-|.|+.+++.++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 3456899999999998877663
No 296
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.03 E-value=2.2e+02 Score=20.12 Aligned_cols=38 Identities=16% Similarity=0.206 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecC--hHHHHHHHHHhhC
Q psy14549 61 IAVVKYLTERFQFIDKTKVGIWGWS--YGGFATAMVLATD 98 (117)
Q Consensus 61 ~~~~~~~~~~~~~~d~~~i~i~G~S--~Gg~~a~~~~~~~ 98 (117)
.++++.++...-.+...+|+++|.| +|-.++..++.+.
T Consensus 144 ~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 144 SGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH 183 (301)
T ss_pred HHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 3444444442223566789999997 9999999987653
No 297
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.91 E-value=70 Score=21.57 Aligned_cols=36 Identities=22% Similarity=0.158 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
..-+++.+.+ .. +. .-=.+.|-|.|+.++..++...
T Consensus 13 ~~Gvl~al~e-~~-~~-~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 13 TAGVLDAFLE-AG-IR-PFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHHHH-cC-CC-CCCEEEEECHHHHhHHHHHhCC
Confidence 3567777777 33 12 1337899999999999887765
No 298
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=27.29 E-value=1.4e+02 Score=17.61 Aligned_cols=32 Identities=28% Similarity=0.379 Sum_probs=20.2
Q ss_pred ceEEEecC--hHHHHHHHHHhhCCCC-ceEEEEeeCC
Q psy14549 78 KVGIWGWS--YGGFATAMVLATDTQN-VFKCGVSVAP 111 (117)
Q Consensus 78 ~i~i~G~S--~Gg~~a~~~~~~~~~~-~~~~~v~~~~ 111 (117)
||+|+|.| ||-.++..+... ++ .+.+++...+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~--~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILES--PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS--TTEEEEEEEETTT
T ss_pred EEEEECCCCHHHHHHHHHHHhc--CCcEEEEEEecCC
Confidence 78999985 777777776553 34 3445544433
No 299
>PF02972 Phycoerythr_ab: Phycoerythrin, alpha/beta chain; InterPro: IPR004228 Cryptophytes are unicellular photosynthetic algae that use a lumenally located light-harvesting system, which is distinct from the phycobilisome structure found in cyanobacteria and red algae. One of the key components of this system is water-soluble phycoerythrin (PE) 545 whose expression is enhanced by low light levels []. Phycoerythrin (PE) 545 is a heterodimeric of alpha(1)alpha(2)betabeta subunits. Each alpha subunit carries a covalently linked 15,16-dihydrobiliverdin chromophore that probably acts as the final energy acceptor. The architecture of the heterodimer suggests that PE 545 may dock to an acceptor protein via a deep cleft and that energy may be transferred via this intermediary protein to the reaction centre [].; GO: 0030089 phycobilisome; PDB: 1XG0_B 1QGW_B 1XF6_B.
Probab=27.22 E-value=45 Score=17.19 Aligned_cols=16 Identities=31% Similarity=0.517 Sum_probs=8.1
Q ss_pred EEEEECCCCCCCCChh
Q psy14549 28 IVVHIDARGSAYRSKE 43 (117)
Q Consensus 28 ~vv~~d~rg~g~~~~~ 43 (117)
.+-.+|+||+.+...+
T Consensus 4 vItiFDhRGC~r~~kE 19 (57)
T PF02972_consen 4 VITIFDHRGCDRAPKE 19 (57)
T ss_dssp EEEEEE-TT-SS---S
T ss_pred EEEEecccccCCCccc
Confidence 4678999998665443
No 300
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=26.95 E-value=1.3e+02 Score=22.02 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhh
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
..-+++.+.++.+.+-..--.+.|-|.|+.++..++..
T Consensus 27 HvGVl~aL~E~gp~ll~~~d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 27 QAGVVDALRDLAPRMLETAHRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred HHHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHhC
Confidence 44566777663222211234589999999999888765
No 301
>KOG1199|consensus
Probab=26.94 E-value=1.6e+02 Score=19.34 Aligned_cols=56 Identities=14% Similarity=0.010 Sum_probs=31.7
Q ss_pred hHhhhcCCeEEEEECCCCCCCCChhhhHhhhhcC---CCcchhHHHHHHHHHHHhcCCC
Q psy14549 19 TYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNL---GRYEIADQIAVVKYLTERFQFI 74 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~rg~g~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~ 74 (117)
...++++|-.|+..|.+.+.+......-...--+ .-..-+|+.+++...+.+++++
T Consensus 26 aerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 26 AERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred HHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 4556799999999999977543221111110001 1112467777777776655544
No 302
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=26.69 E-value=50 Score=22.20 Aligned_cols=26 Identities=31% Similarity=0.129 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecCh
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSY 86 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~ 86 (117)
=..+++|+.+ ...++++++.++|-|.
T Consensus 166 K~~Al~~L~~-~~~~~~~~vl~aGDSg 191 (247)
T PF05116_consen 166 KGAALRYLME-RWGIPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHH-HHT--GGGEEEEESSG
T ss_pred HHHHHHHHHH-HhCCCHHHEEEEeCCC
Confidence 4578999988 4456888999999994
No 303
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=26.60 E-value=91 Score=23.02 Aligned_cols=34 Identities=29% Similarity=0.241 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 61 IAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 61 ~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
.-+++.+.+ .+ +.+ -.|.|-|.|+.++..++...
T Consensus 89 iGVLkaL~E-~g-l~p--~vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 89 IGVLKALFE-AN-LLP--RIISGSSAGSIVAAILCTHT 122 (421)
T ss_pred HHHHHHHHH-cC-CCC--CEEEEECHHHHHHHHHHcCC
Confidence 357777766 33 333 36999999999998887764
No 304
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.59 E-value=2.3e+02 Score=19.91 Aligned_cols=38 Identities=16% Similarity=0.188 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecC--hHHHHHHHHHhhC
Q psy14549 61 IAVVKYLTERFQFIDKTKVGIWGWS--YGGFATAMVLATD 98 (117)
Q Consensus 61 ~~~~~~~~~~~~~~d~~~i~i~G~S--~Gg~~a~~~~~~~ 98 (117)
.++++.++.....+.-.+|+++|.| +|..++..++...
T Consensus 143 ~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g 182 (296)
T PRK14188 143 LGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAAN 182 (296)
T ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCC
Confidence 3445544442223567789999977 9999999987553
No 305
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi. Since they are not found in humans, they make a promising new target for antimicrobial drug development. Homoserine O-succinyltransferase (HST) is a representative from this class and has recently had the key amino acids involved in substrate specificity and catalysis elucidated [].; GO: 0016746 transferase activity, transferring acyl groups, 0019281 L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine, 0005737 cytoplasm; PDB: 2H2W_A 2GHR_A 2VDJ_A.
Probab=26.54 E-value=2.2e+02 Score=20.18 Aligned_cols=33 Identities=6% Similarity=0.044 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHh
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLA 96 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~ 96 (117)
..++.++++|.+++ ....+.-|||++.++...-
T Consensus 120 W~El~~i~dwa~~~-------v~stl~iCWgAqAaLy~~y 152 (298)
T PF04204_consen 120 WDELTEIFDWAKTH-------VTSTLFICWGAQAALYHFY 152 (298)
T ss_dssp HHHHHHHHHHHHHH-------EEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-------CCcchhhhHHHHHHHHHHc
Confidence 68899999999885 4667777999999887753
No 306
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB. When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.
Probab=25.16 E-value=48 Score=21.64 Aligned_cols=17 Identities=12% Similarity=0.186 Sum_probs=13.3
Q ss_pred hHhhhcCCeEEEEECCC
Q psy14549 19 TYLVSKRHVIVVHIDAR 35 (117)
Q Consensus 19 ~~~~a~~g~~vv~~d~r 35 (117)
..++|++||.|.++|.-
T Consensus 45 alyLA~~G~~VtAvD~s 61 (192)
T PF03848_consen 45 ALYLASQGFDVTAVDIS 61 (192)
T ss_dssp HHHHHHTT-EEEEEESS
T ss_pred HHHHHHCCCeEEEEECC
Confidence 46678999999999965
No 307
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=24.90 E-value=1.6e+02 Score=20.09 Aligned_cols=21 Identities=38% Similarity=0.468 Sum_probs=16.2
Q ss_pred ceEEEecChHHHHHHHHHhhC
Q psy14549 78 KVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 78 ~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
+|.|+|...+|.++..++.+.
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~ 23 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARA 23 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHT
T ss_pred eEEEECCCHHHHHHHHHHHhc
Confidence 689999999999988887775
No 308
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=24.25 E-value=97 Score=19.33 Aligned_cols=21 Identities=33% Similarity=0.355 Sum_probs=17.7
Q ss_pred ceEEEecChHHHHHHHHHhhC
Q psy14549 78 KVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 78 ~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
+|.|+|.+.+|..+...+...
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~ 21 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARP 21 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHT
T ss_pred CEEEEecHHHHHHHHHHHhcC
Confidence 588999999999998777664
No 309
>COG4475 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.84 E-value=1.6e+02 Score=18.76 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecChH
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYG 87 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~G 87 (117)
..|....++.+++ ...+.+..++++|.|-.
T Consensus 5 ~k~~~~vl~d~~~-~s~lk~g~lfvlG~StS 34 (180)
T COG4475 5 KKDTRTVLDDVQD-QSELKQGQLFVLGLSTS 34 (180)
T ss_pred HHHHHHHHHHHHH-hhccCCCCEEEEecchH
Confidence 3556677777777 56678899999999853
No 310
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=23.30 E-value=1.7e+02 Score=17.07 Aligned_cols=23 Identities=30% Similarity=0.374 Sum_probs=17.4
Q ss_pred ceEEEe-cChHHHHHHHHHhhCCCC
Q psy14549 78 KVGIWG-WSYGGFATAMVLATDTQN 101 (117)
Q Consensus 78 ~i~i~G-~S~Gg~~a~~~~~~~~~~ 101 (117)
||+|+| ..+.|.-.+.++..+ |+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~ 24 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PD 24 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-ST
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CC
Confidence 688999 667777777777776 65
No 311
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.29 E-value=2.7e+02 Score=19.50 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCCCCCCceEEEecC--hHHHHHHHHHhhC
Q psy14549 62 AVVKYLTERFQFIDKTKVGIWGWS--YGGFATAMVLATD 98 (117)
Q Consensus 62 ~~~~~~~~~~~~~d~~~i~i~G~S--~Gg~~a~~~~~~~ 98 (117)
++++.++...-.+.-.+++++|.| +|--++..++.+.
T Consensus 144 avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~g 182 (284)
T PRK14179 144 GIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKN 182 (284)
T ss_pred HHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCC
Confidence 344444431123466789999997 9999999987654
No 312
>PF00598 Flu_M1: Influenza Matrix protein (M1); InterPro: IPR001561 Matrix protein (M1) of Influenza virus is a bifunctional membrane/RNA-binding protein that mediates the encapsidation of RNA-nucleoprotein cores into the membrane envelope. It is therefore required that M1 binds both membrane and RNA simultaneously []. M1 is comprised of two domains connected by a linker sequence. The N-terminal domain has a multi-helical structure that can be divided into two subdomains []. The C-terminal domain also contains alpha-helical structure.; GO: 0003723 RNA binding, 0005198 structural molecule activity; PDB: 3MD2_C 4D9J_L 1EA3_B 1AA7_A 3VDX_C 1HHI_F 2Z16_B.
Probab=23.01 E-value=7 Score=23.83 Aligned_cols=29 Identities=17% Similarity=0.376 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEecCh
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSY 86 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~ 86 (117)
-.|...+++|++. ++.+.+-.-+++|+|+
T Consensus 35 n~DLd~llEWlK~-r~~Ls~l~K~iiG~~~ 63 (157)
T PF00598_consen 35 NTDLDSLLEWLKN-RPILSPLTKGIIGFVF 63 (157)
T ss_dssp ---HHHHHHHHHT--SSS-HHHHHHHHHHH
T ss_pred ccCHHHHHHHHhc-CcccchHHHhhhheEE
Confidence 4678899999988 7766555556666554
No 313
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=22.74 E-value=2.1e+02 Score=17.97 Aligned_cols=44 Identities=18% Similarity=0.145 Sum_probs=25.4
Q ss_pred CCeEEEEECCCCCCCCChhhhHhhhhcCCCcchhHHHHHHHHHHHhcCCCCCCceEEEecChH
Q psy14549 25 RHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYG 87 (117)
Q Consensus 25 ~g~~vv~~d~rg~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~~~i~i~G~S~G 87 (117)
.+-.+|+.|-+|-.-+ +.+++..++.... .+ ..+=++++|.+.|
T Consensus 66 ~~~~~i~Ld~~Gk~~s----------------S~~fA~~l~~~~~-~g--~~~i~F~IGG~~G 109 (155)
T PF02590_consen 66 PNDYVILLDERGKQLS----------------SEEFAKKLERWMN-QG--KSDIVFIIGGADG 109 (155)
T ss_dssp TTSEEEEE-TTSEE------------------HHHHHHHHHHHHH-TT--S-EEEEEE-BTTB
T ss_pred CCCEEEEEcCCCccCC----------------hHHHHHHHHHHHh-cC--CceEEEEEecCCC
Confidence 4566778887764322 5666766666555 32 2234889999997
No 314
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=22.43 E-value=2e+02 Score=17.67 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHH
Q psy14549 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVL 95 (117)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~ 95 (117)
..-+++.+.+ .. +...--.+.|-|.|+.++..++
T Consensus 13 ~~gvl~~l~~-~~-~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 13 HAGVLSALAE-RG-LLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHH-hC-CccCCCEEEEEcHHHHHHHHHh
Confidence 3456666666 32 2224566889999999998776
No 315
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=22.01 E-value=85 Score=21.75 Aligned_cols=17 Identities=24% Similarity=0.149 Sum_probs=14.8
Q ss_pred EEEecChHHHHHHHHHh
Q psy14549 80 GIWGWSYGGFATAMVLA 96 (117)
Q Consensus 80 ~i~G~S~Gg~~a~~~~~ 96 (117)
.|.|-|.||.+++.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48899999999988865
No 316
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=21.90 E-value=1.6e+02 Score=21.62 Aligned_cols=34 Identities=26% Similarity=0.259 Sum_probs=24.4
Q ss_pred HHHHHHHHHhcCCCCCCceEEEecChHHHHHHHHHhhC
Q psy14549 61 IAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 61 ~~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
.-+++.+.+ .+ + ..-.|.|-|.|+.++..++...
T Consensus 83 ~GVlkaL~e-~g-l--lp~iI~GtSAGAivaalla~~t 116 (407)
T cd07232 83 FGVVKALLD-AD-L--LPNVISGTSGGSLVAALLCTRT 116 (407)
T ss_pred HHHHHHHHh-CC-C--CCCEEEEECHHHHHHHHHHcCC
Confidence 457777777 33 2 2345999999999998888754
No 317
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=21.60 E-value=1.6e+02 Score=21.59 Aligned_cols=22 Identities=23% Similarity=0.164 Sum_probs=18.0
Q ss_pred CceEEEecChHHHHHHHHHhhC
Q psy14549 77 TKVGIWGWSYGGFATAMVLATD 98 (117)
Q Consensus 77 ~~i~i~G~S~Gg~~a~~~~~~~ 98 (117)
.||.|+|.+++|..+...+.+.
T Consensus 2 ~~VVIIGgG~aG~~aA~~l~~~ 23 (438)
T PRK13512 2 PKIIVVGAVAGGATCASQIRRL 23 (438)
T ss_pred CeEEEECCcHHHHHHHHHHHhh
Confidence 3799999999999988776553
No 318
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=20.82 E-value=1.2e+02 Score=21.88 Aligned_cols=23 Identities=26% Similarity=0.218 Sum_probs=18.9
Q ss_pred CCCceEEEecChHHHHHHHHHhh
Q psy14549 75 DKTKVGIWGWSYGGFATAMVLAT 97 (117)
Q Consensus 75 d~~~i~i~G~S~Gg~~a~~~~~~ 97 (117)
++..|.|+|.|+|...-..+...
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~ 204 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPE 204 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHH
Confidence 78899999999999987665544
No 319
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=20.77 E-value=2.4e+02 Score=20.71 Aligned_cols=28 Identities=7% Similarity=0.138 Sum_probs=17.5
Q ss_pred HHHHHHHHhcCCCCCCceEEEecChHHHHHHHH
Q psy14549 62 AVVKYLTERFQFIDKTKVGIWGWSYGGFATAMV 94 (117)
Q Consensus 62 ~~~~~~~~~~~~~d~~~i~i~G~S~Gg~~a~~~ 94 (117)
+.++-+++ ++++.-++|.|.|+.+...+
T Consensus 16 qtLdVi~~-----~p~~f~vval~ag~n~~~l~ 43 (385)
T COG0743 16 QTLDVIRR-----NPDKFEVVALAAGKNVELLA 43 (385)
T ss_pred HHHHHHHh-----CCCcEEEEEEecCCcHHHHH
Confidence 34454444 45577778888888766544
No 320
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional
Probab=20.30 E-value=2.5e+02 Score=22.04 Aligned_cols=27 Identities=22% Similarity=0.384 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHHhcCCCCCCceEEEe
Q psy14549 57 IADQIAVVKYLTERFQFIDKTKVGIWG 83 (117)
Q Consensus 57 ~~d~~~~~~~~~~~~~~~d~~~i~i~G 83 (117)
..|+.+....++++..++..-||+|||
T Consensus 528 LfDLq~tta~Ik~~t~HLkGlkI~IMG 554 (611)
T PRK02048 528 LYDLQSTIARIKEATSHLKGLKIGIMG 554 (611)
T ss_pred hhhHHHHHHHHHHHhCCCCCceEEEEE
Confidence 566777777777766677778999998
No 321
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=20.20 E-value=2.3e+02 Score=17.60 Aligned_cols=49 Identities=12% Similarity=0.092 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcC---CCCCCceEEEecChHHHHHHHHHhhCCCCceEEEEeeCCC
Q psy14549 61 IAVVKYLTERFQ---FIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPV 112 (117)
Q Consensus 61 ~~~~~~~~~~~~---~~d~~~i~i~G~S~Gg~~a~~~~~~~~~~~~~~~v~~~~~ 112 (117)
.++.+++.+.++ .+++++|.+...+..+...+..+... |. .+++.-.|.
T Consensus 99 ~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d-pG--D~VlVp~P~ 150 (153)
T PLN02994 99 KAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD-PG--DAFLVPTPY 150 (153)
T ss_pred HHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC-CC--CEEEEeCCC
Confidence 345556655333 36888998886666666555555555 43 334444443
Done!