RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy14549
(117 letters)
>gnl|CDD|215859 pfam00326, Peptidase_S9, Prolyl oligopeptidase family.
Length = 212
Score = 103 bits (260), Expect = 5e-29
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 13 FSIDFHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQ 72
S ++ L++ R +V + RGS + + +LG+ E D IA +YL +
Sbjct: 1 PSFSWNLQLLADRGYVVAVANGRGSGGYGRAWHDAGKGDLGQNEFDDFIAAAEYLIAQG- 59
Query: 73 FIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFLY 117
++D ++ IWG SYGG+ T L ++FK V+V PV ++L
Sbjct: 60 YVDPDRLAIWGGSYGGYLTGAAL-NQRPDLFKAAVAVVPVVDWLT 103
>gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
[Amino acid transport and metabolism].
Length = 620
Score = 83.3 bits (206), Expect = 5e-20
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 1 YGGPGSNIISDRFSID-FHTYLVSKRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIAD 59
+GGP + +S + L S V+ + RGS +E ++ + G ++ D
Sbjct: 401 HGGPSA---QVGYSFNPEIQVLAS-AGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLED 456
Query: 60 QIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFLY 117
IA V L + +D ++GI G SYGG+ T + FK V+VA ++L
Sbjct: 457 LIAAVDAL-VKLPLVDPERIGITGGSYGGYMTLLAATKT--PRFKAAVAVAGGVDWLL 511
>gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This
catalytic domain is found in a very wide range of
enzymes.
Length = 226
Score = 33.3 bits (76), Expect = 0.016
Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 10/88 (11%)
Query: 29 VVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWSYGG 88
V+ D RG S ++ Y D ++ L + KV + G S GG
Sbjct: 3 VIAFDLRGFGRSSP------PKDFADYRFDDLAEDLEALLDAL---GLDKVNLVGHSMGG 53
Query: 89 FATAMVLATDTQNVFKCGVSVAPVTNFL 116
A+ A + K V V V
Sbjct: 54 L-IALAYAAKYPDRVKALVLVGTVHPAG 80
>gnl|CDD|202693 pfam03583, LIP, Secretory lipase. These lipases are expressed
and secreted during the infection cycle of these
pathogens. In particular, C. albicans has a large
number of different lipases, possibly reflecting broad
lipolytic activity, which may contribute to the
persistence and virulence of C. albicans in human
tissue.
Length = 291
Score = 32.4 bits (74), Expect = 0.036
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 77 TKVGIWGWSYGGFATA 92
KV +WG+S GG A+
Sbjct: 71 AKVALWGYSGGGLASG 86
>gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family
contains alpha/beta hydrolase enzymes of diverse
specificity.
Length = 187
Score = 30.5 bits (69), Expect = 0.12
Identities = 15/79 (18%), Positives = 21/79 (26%), Gaps = 10/79 (12%)
Query: 24 KRHVIVVHIDARGSAYRSKEQEHSVYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWG 83
V+ D G S Y + D A + L + V + G
Sbjct: 22 AAGYRVLAPDLPG-------HGDSDGPPRTPYSLEDDAADLAALLDAL---GLGPVVLVG 71
Query: 84 WSYGGFATAMVLATDTQNV 102
S GG A + V
Sbjct: 72 HSLGGAVALAAAARRPERV 90
>gnl|CDD|218645 pfam05577, Peptidase_S28, Serine carboxypeptidase S28. These
serine proteases include several eukaryotic enzymes such
as lysosomal Pro-X carboxypeptidase,
dipeptidyl-peptidase II, and thymus-specific serine
peptidase.
Length = 433
Score = 30.8 bits (70), Expect = 0.14
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTNFL 116
+AD + +K + ++F + +K +G SY G A V S AP+ +
Sbjct: 93 LADVASFIKAMNQKFNGLSSSKWITFGGSYSGSLAAWARKKYPHLVVGAVASSAPLLAKV 152
>gnl|CDD|217536 pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase,
isoform II. Platelet-activating factor acetylhydrolase
(PAF-AH) is a subfamily of phospholipases A2,
responsible for inactivation of platelet-activating
factor through cleavage of an acetyl group. Three known
PAF-AHs are the brain heterotrimeric PAF-AH Ib, whose
catalytic beta and gamma subunits are aligned in
pfam02266, the extracellular, plasma PAF-AH (pPAF-AH),
and the intracellular PAF-AH isoform II (PAF-AH II).
This family aligns pPAF-AH and PAF-AH II, whose
similarity was previously noted.
Length = 372
Score = 30.5 bits (69), Expect = 0.16
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 74 IDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGV 107
+D +K+ + G S+GG L+ DT+ F+CG+
Sbjct: 218 LDTSKIAVIGHSFGGATVIQSLSEDTR--FRCGI 249
>gnl|CDD|223489 COG0412, COG0412, Dienelactone hydrolase and related enzymes
[Secondary metabolites biosynthesis, transport, and
catabolism].
Length = 236
Score = 28.9 bits (65), Expect = 0.48
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 57 IADQIAVVKYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAP 111
+AD A + YL R +D ++G+ G+ GG A++ AT V K V+
Sbjct: 93 LADIDAALDYL-ARQPQVDPKRIGVVGFCMGG-GLALLAATRAPEV-KAAVAFYG 144
>gnl|CDD|226651 COG4188, COG4188, Predicted dienelactone hydrolase [General
function prediction only].
Length = 365
Score = 29.0 bits (65), Expect = 0.51
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Query: 47 SVYRNLGRYEIADQIAVVKYLTERFQF------IDKTKVGIWGWSYGGFATAMVLA 96
S D A++ L + +D +VG+ G S+GG+ TAM LA
Sbjct: 123 SYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGY-TAMELA 177
>gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family. This
family contains a diverse range of alpha/beta hydrolase
enzymes.
Length = 145
Score = 27.0 bits (60), Expect = 2.0
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 74 IDKTKVGIWGWSYGGFATAMVLATD 98
+D ++ + G S GG ++ A D
Sbjct: 55 LDPERIVLVGHSLGGGVALLLAARD 79
>gnl|CDD|216890 pfam02129, Peptidase_S15, X-Pro dipeptidyl-peptidase (S15 family).
Length = 265
Score = 27.3 bits (61), Expect = 2.0
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 28 IVVHIDARGSAYRSKEQEHS--VYRNLGRYEIADQIAVVKYLTERFQFIDKTKVGIWGWS 85
VV D RG+ S V+ G E+AD V+ +L Q KVG+ G S
Sbjct: 53 AVVVQDVRGTGG-------SEGVFTVGGPQEVADGKDVIDWLAG--QPWCNGKVGMTGIS 103
Query: 86 YGGFATAMVLATD 98
Y G AT
Sbjct: 104 YLGTTQLAAAATG 116
>gnl|CDD|178061 PLN02442, PLN02442, S-formylglutathione hydrolase.
Length = 283
Score = 26.7 bits (59), Expect = 3.4
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 65 KYLTERFQFIDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAPVTN 114
K L++ F +D ++ I+G S GG A+ + + +K + AP+ N
Sbjct: 131 KLLSDNFDQLDTSRASIFGHSMGGHG-ALTIYLKNPDKYKSVSAFAPIAN 179
>gnl|CDD|225989 COG3458, COG3458, Acetyl esterase (deacetylase) [Secondary
metabolites biosynthesis, transport, and catabolism].
Length = 321
Score = 26.2 bits (58), Expect = 4.0
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 71 FQFIDKTKVGIWGWSYGGFATAMVLATD 98
+D+ ++G+ G S GG A D
Sbjct: 170 LDEVDEERIGVTGGSQGGGLALAAAALD 197
>gnl|CDD|225375 COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily
[General function prediction only].
Length = 264
Score = 26.2 bits (58), Expect = 4.3
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 74 IDKTKVGIWGWSYGGFATAMVLATDTQNVFKCGVSVAP 111
+ + I G S GG L T + F ++P
Sbjct: 134 TNSERTAIIGHSLGGLFVLFALLTY-PDCFGRYGLISP 170
>gnl|CDD|137782 PRK10259, PRK10259, hypothetical protein; Provisional.
Length = 86
Score = 25.1 bits (54), Expect = 6.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 85 SYGGFATAMVLATDTQNVFKCGVSVA 110
S+G FA V A+ QN+ K GV A
Sbjct: 17 SFGVFAAEPVTASQAQNMNKIGVVSA 42
>gnl|CDD|215741 pfam00135, COesterase, Carboxylesterase family.
Length = 510
Score = 25.8 bits (57), Expect = 6.8
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 27/106 (25%)
Query: 13 FSIDFHTYLVSKRHVIVVHIDARGSAYR--------SKEQEHSVYRNLGRYEIADQIAVV 64
L + V+VV I YR + + E G + DQ+ +
Sbjct: 118 LDDYDGPDLAASEDVVVVTI-----NYRLGALGFLSTGDSELP-----GNAGLLDQVLAL 167
Query: 65 KYLTERFQFI-----DKTKVGIWGWSYGGFAT-AMVLATDTQNVFK 104
+++ I D V ++G S G + ++L+ ++ +F
Sbjct: 168 RWVK---DNIAAFGGDPDNVTLFGESAGAASVSLLLLSPASRGLFH 210
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.138 0.423
Gapped
Lambda K H
0.267 0.0784 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 5,901,033
Number of extensions: 498196
Number of successful extensions: 405
Number of sequences better than 10.0: 1
Number of HSP's gapped: 401
Number of HSP's successfully gapped: 32
Length of query: 117
Length of database: 10,937,602
Length adjustment: 80
Effective length of query: 37
Effective length of database: 7,389,282
Effective search space: 273403434
Effective search space used: 273403434
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (24.1 bits)