BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14552
(290 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
Length = 1218
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/286 (57%), Positives = 198/286 (69%), Gaps = 43/286 (15%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYI+VSFSNATLVLSIGETVEEVS SGF GTTPTL CS +GD+++VQ+YP+G+RHI
Sbjct: 470 FDAYIIVSFSNATLVLSIGETVEEVSDSGFLGTTPTLSCSPLGDDAVVQIYPNGVRHI-- 527
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
SDK+ MH D K +KKKIV+CA
Sbjct: 528 -----------RSDKR-------------------------MH---DWKAPEKKKIVKCA 548
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
NQRQ+VIAL GG L+YFEM P TG L+E + +M S+VLCMAL+NAPSGEQMSRFLAV
Sbjct: 549 ANQRQVVIALGGGELVYFEMDP-TGHLNEHKDRKEMNSDVLCMALANAPSGEQMSRFLAV 607
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
GL D TVR+ISL DCL Q +Q +P + ESL ++EMGASD SSDEPA +L LYL
Sbjct: 608 GLTDETVRIISLDTTDCLVQLKMQAIPAMPESLCIVEMGASDGGSSDEPAMN-SLSMLYL 666
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G+++D R RYLG +PVKLFKIR +GNEA
Sbjct: 667 NIGLQNGVLLRTVLDGVTGEMADTRARYLGGKPVKLFKIRTRGNEA 712
>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
Length = 1217
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/287 (56%), Positives = 198/287 (68%), Gaps = 43/287 (14%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIG+TVEEV+ SGF GTTPTLCCSA+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGDTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I++C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIMKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL + PSGEQ S FLA
Sbjct: 548 AVNQRQVVIALSGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGSVPSGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL +++Q LP AESL ++EMG + TSS++ +T G +Y
Sbjct: 607 VGLADNTVRIISLDPTDCLSPRSMQALPSAAESLCIVEMGTVE-TSSEDDGVTITTGCIY 665
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 666 LNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIQMQGSEA 712
>gi|47212603|emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1171
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/287 (55%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IVRC
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL+ ++Q LP ESL ++EMG + DE ++G LY
Sbjct: 607 VGLADNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVE--KQDELGEKASIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|410926437|ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Takifugu
rubripes]
Length = 1020
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/287 (55%), Positives = 192/287 (66%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD ++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDEALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IVRC
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL+ ++Q LP ESL ++EMG + DE ++G LY
Sbjct: 607 VGLADNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVE--KQDELGEKGSMGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
Length = 1216
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/287 (56%), Positives = 192/287 (66%), Gaps = 45/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+G++++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I++C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIIKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL N +GEQ S FLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGNVAAGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP AESL ++EMG D TS D T L+
Sbjct: 607 VGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGIKDDTSEDSNQMQST---LH 663
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D SGDLSD R RYLGSRPVKLF+IR QGN+A
Sbjct: 664 LNIGLQNGVLLRTVLDPISGDLSDTRTRYLGSRPVKLFRIRMQGNQA 710
>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
Length = 1217
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/287 (56%), Positives = 194/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+G++++VQVYPDGIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL N GEQ S FLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP AESL ++EMGA D +S E A P +LY
Sbjct: 607 VGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDADNS-EDAAP-QQSSLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D SGDL+D R RYLGSRPVKLF+IR QGN+A
Sbjct: 665 LNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 711
>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis
niloticus]
Length = 1217
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/287 (55%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G++++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IVRC
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL+ ++Q LP ESL ++EMG + DE T+G LY
Sbjct: 607 VGLADNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVE--KQDELGDKGTIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
Length = 1217
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQ+YPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK IV+C
Sbjct: 528 ------------RSDKR----------------------------VNEWKTPGKKSIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL P GEQ RFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKEMSSEVVCMALGRVPVGEQRCRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL+DNTVR+ISL P DCL ++Q LP+ +ESL ++EMG ++ + +E P T+G L+
Sbjct: 607 VGLSDNTVRIISLDPSDCLSPLSMQALPEPSESLCIVEMGGTE--AKEETGEPGTVGGLF 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLG RPVKLF+I QG+EA
Sbjct: 665 LNIGLQNGVLLRTVLDNVTGDLSDTRTRYLGVRPVKLFRISMQGSEA 711
>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
Length = 1217
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/287 (55%), Positives = 195/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+G++++VQVYPDGIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL N GEQ S FLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP AESL ++EMGA + +S++ A + +LY
Sbjct: 607 VGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDAAPQQS--SLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D SGDL+D R RYLGSRPVKLF+IR QGN+A
Sbjct: 665 LNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 711
>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
Length = 1215
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 45/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIG+TVEEV+ SGF GTTPTLCCSA+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGDTVEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I++C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIIKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN RQ+VIAL GG L+YFEM P TG L+E +E +M S+V+CMAL + P+GEQ + FLA
Sbjct: 548 AVNSRQVVIALSGGELVYFEMDP-TGQLNEYTERKKMPSDVMCMALGSVPAGEQRAWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL +++Q LP AESL ++EMG + S+E T G Y
Sbjct: 607 VGLADNTVRIISLDPADCLSPRSMQALPSAAESLCIVEMGTGE---SNEEGTVSTAGCFY 663
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 664 LNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 710
>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
Length = 1217
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/287 (55%), Positives = 194/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+G++++VQVYPDGIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL N GEQ S FLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP AESL ++EMG D +S++ A + +LY
Sbjct: 607 VGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGVKDADNSEDSAPQQS--SLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D SGDL+D R RYLGSRPVKLF+IR QGN+A
Sbjct: 665 LNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 711
>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
Length = 1201
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/287 (55%), Positives = 195/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+G++++VQVYPDGIRHI
Sbjct: 453 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIR 512
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 513 A-------------DKR----------------------------VNEWKAPGKKTIVKC 531
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL N GEQ S FLA
Sbjct: 532 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLA 590
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP AESL ++EMGA + +S++ A + +LY
Sbjct: 591 VGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKEADNSEDSAPQQS--SLY 648
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D SGDL+D R RYLGSRPVKLF+IR QGN+A
Sbjct: 649 LNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQA 695
>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
Length = 908
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 160 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 219
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 220 A-------------DKR----------------------------VNEWKTPGKKTIVKC 238
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 239 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 297
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 298 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 355
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 356 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 402
>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
Length = 1133
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 367 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 426
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 427 A-------------DKR----------------------------VNEWKTPGKKTIVKC 445
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 446 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 504
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 505 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 562
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 563 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 609
>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
Length = 897
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 149 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 208
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 209 A-------------DKR----------------------------VNEWKTPGKKTIVKC 227
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 228 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 286
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 287 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 344
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 345 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 391
>gi|432863837|ref|XP_004070177.1| PREDICTED: splicing factor 3B subunit 3-like [Oryzias latipes]
Length = 1146
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/287 (55%), Positives = 192/287 (66%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G++++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IVRC
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG + DE T+G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVE--KQDELGEKGTMGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|444722328|gb|ELW63026.1| Splicing factor 3B subunit 3 [Tupaia chinensis]
Length = 840
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 140 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 199
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 200 A-------------DKR----------------------------VNEWKTPGKKTIVKC 218
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 219 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 277
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 278 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 335
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 336 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 382
>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
Length = 1217
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
Length = 1217
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
Length = 1217
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/287 (55%), Positives = 195/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+G++++VQVYPDGIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL N GEQ S FLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP AESL ++EMGA D +S++ + + +LY
Sbjct: 607 VGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNSEDLSPQQS--SLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QGN+A
Sbjct: 665 LNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQA 711
>gi|74190887|dbj|BAE28225.1| unnamed protein product [Mus musculus]
Length = 937
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
Length = 1253
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 505 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 564
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 565 A-------------DKR----------------------------VNEWKTPGKKTIVKC 583
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 584 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 642
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 643 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 700
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 701 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 747
>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
jacchus]
gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
boliviensis]
gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=STAF130; AltName:
Full=Spliceosome-associated protein 130; Short=SAP 130
gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
Length = 1217
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
Length = 1217
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
Short=SF3b130; AltName: Full=Spliceosome-associated
protein 130; Short=SAP 130
gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
Length = 1217
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
Length = 1217
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
familiaris]
gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda
melanoleuca]
gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
rotundus]
gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
Length = 1217
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
Length = 1122
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
Length = 1217
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
mulatta]
gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
mulatta]
Length = 1199
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 451 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 510
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 511 A-------------DKR----------------------------VNEWKTPGKKTIVKC 529
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 530 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 588
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 589 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 646
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 647 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 693
>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 1240
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 450 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 509
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 510 A-------------DKR----------------------------VNEWKTPGKKTIVKC 528
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 529 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 587
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 588 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 645
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 646 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 692
>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis
domestica]
Length = 1202
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 454 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 513
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 514 A-------------DKR----------------------------VNEWKTPGKKTIVKC 532
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 533 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 591
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 592 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAE--KQDELGERGSIGFLY 649
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 650 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 696
>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
Length = 1225
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 192/287 (66%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-VGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
Length = 1217
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 1218
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/287 (56%), Positives = 190/287 (66%), Gaps = 43/287 (14%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+GD+++VQVYPDGIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I++C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIMKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL G L+YFEM P TG L+E +E M S+V CMAL N GE SRFLA
Sbjct: 548 AVNQRQVVIALTAGELVYFEMDP-TGQLNEYTERKAMPSDVSCMALGNVVPGELRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL ++Q LP AESL ++EMGA+D D VT NLY
Sbjct: 607 VGLADNTVRIISLDPSDCLSPLSMQALPAAAESLCIVEMGAAD-KKPDSEESTVTQSNLY 665
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L VGLQNG LLR V+D +GDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 666 LNVGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRIKMQGSEA 712
>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
Length = 1217
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
Length = 1217
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
Length = 1217
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
Length = 1271
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 523 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 582
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 583 A-------------DKR----------------------------VNEWKTPGKKTIVKC 601
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 602 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 660
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 661 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 718
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 719 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 765
>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
Length = 1215
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 193/287 (67%), Gaps = 45/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIG+TVEEV+ SGF GTTPTL CSA+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGDTVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I +C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M S+V+CMAL + P+GEQ S FLA
Sbjct: 548 AVNQRQVVIALSGGELVYFEMDP-TGQLNEYTERKKMPSDVMCMALGSVPAGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL +++Q LP AESL ++EMG D ++E + G +Y
Sbjct: 607 VGLADNTVRVISLDPSDCLSPRSMQALPSAAESLCIVEMGTGD---TNEEGVASSAGCIY 663
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 664 LNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 710
>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
Length = 1217
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/287 (55%), Positives = 192/287 (66%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G++++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IVRC
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG + DE T+G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVE--KEDELGVKGTVGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
Length = 1217
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 192/287 (66%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G++++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I+RC
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIIRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG + DE T+G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVE--KQDELGEKGTIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
Length = 1217
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/287 (55%), Positives = 194/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+G++++VQVYPDGIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL N GEQ S FLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGNVAIGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP AESL ++EMGA D +S+E + + +LY
Sbjct: 607 VGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNSEELS--LQQSSLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D SGDL+D R RYLGSR VKLF+I+ QGN+A
Sbjct: 665 LNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRAVKLFRIKMQGNQA 711
>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
Length = 1217
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/287 (54%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G++++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAE--KQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
Length = 1215
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 192/287 (66%), Gaps = 46/287 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEV+ SGF GTTPTL CS++GDN+++QVYP+GIRHI
Sbjct: 469 EFDAYIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCSSLGDNALLQVYPEGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ +++ K K+ I RC
Sbjct: 529 A-------------DRR----------------------------INEWKSPGKRAISRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI+L GG L+YFEM P TG L+E +E +M +EV+CMAL+N PSGEQ SRFLA
Sbjct: 548 AVNQRQVVISLAGGELVYFEMDP-TGQLNEYTERKEMTAEVVCMALANVPSGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL ++Q LP ESL ++EMG D S E G T G L+
Sbjct: 607 VGLADNTVRVISLDPNDCLTPLSMQALPATPESLCIVEMGGHDKDS--ETTG--TSGQLF 662
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDL+D R RYLGSRPVKLF++ Q +EA
Sbjct: 663 LNIGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRVMTQNHEA 709
>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
Length = 1217
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/287 (54%), Positives = 191/287 (66%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G++++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I+RC
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIIRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG + DE T+ LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVE--KQDELGEKGTICFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
Length = 1217
Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 158/287 (55%), Positives = 192/287 (66%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+G++++VQVYPDGIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL N GEQ S FLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGNVAIGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP AESL ++EMGA D +++ +LY
Sbjct: 607 VGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKD--ANNSEELSSQQSSLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QGN+A
Sbjct: 665 LNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQA 711
>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
Length = 1101
Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 157/290 (54%), Positives = 193/290 (66%), Gaps = 47/290 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 413 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 472
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 473 A-------------DKR----------------------------VNEWKTPGKKTIVKC 491
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 492 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 550
Query: 181 V---GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
V GL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G
Sbjct: 551 VLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIG 608
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LYL +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 609 FLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 658
>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
tropicalis]
Length = 1217
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/287 (53%), Positives = 193/287 (67%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G++++VQVYPDGIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKIIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP E+L ++EMG ++ DE ++G LY
Sbjct: 607 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPEALCIVEMGGAE--RQDELGERGSIGFLY 664
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 711
>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
Length = 1228
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/295 (52%), Positives = 192/295 (65%), Gaps = 50/295 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSS------DEPA--G 232
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+S D PA
Sbjct: 607 VGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSAGGVNEDAPAQRS 666
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 667 GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 721
>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
Length = 1228
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/295 (52%), Positives = 192/295 (65%), Gaps = 50/295 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPDGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSS----DEPAGP--- 233
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+S D+ A P
Sbjct: 607 VGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSAGALDDDAPPQRS 666
Query: 234 -VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG EA
Sbjct: 667 GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEA 721
>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
Length = 1273
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/295 (52%), Positives = 193/295 (65%), Gaps = 50/295 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 514 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 572
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 573 ------------RSDKR----------------------------VNEWKAPGKKSITKC 592
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FL+
Sbjct: 593 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPDGEQRSWFLS 651
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSS-----DEPA---G 232
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T++ D PA G
Sbjct: 652 VGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTTAVGDEDVPAQRSG 711
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 712 GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 766
>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
Length = 1225
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/295 (52%), Positives = 192/295 (65%), Gaps = 50/295 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPDGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSS----DEPAGP--- 233
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+S D+ A P
Sbjct: 607 VGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTSAGALDDDAPPQRS 666
Query: 234 -VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG EA
Sbjct: 667 GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEA 721
>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
Length = 1229
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 192/296 (64%), Gaps = 51/296 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSS------DEPA--- 231
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T++ D PA
Sbjct: 607 VGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNAGGADDDVPAQRS 666
Query: 232 GPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG EA
Sbjct: 667 GGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEA 722
>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
Length = 1219
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 189/287 (65%), Gaps = 43/287 (14%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CSA+ D+++VQVYP GIRHI
Sbjct: 469 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSALSDDALVQVYPGGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK IV+C
Sbjct: 528 -------CSDKR---------------------------------VNEWKAPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A+NQRQ+VIAL GG L YFEM P TG L E E +M ++V+CMAL+N GEQ+S FLA
Sbjct: 548 AINQRQVVIALSGGELAYFEMDP-TGQLHEYKERKRMNADVVCMALANVAPGEQLSLFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLAD+TVR+ISL P DCL +++QGLP AESL ++EMG +D D A T LY
Sbjct: 607 VGLADSTVRIISLDPSDCLAPRSIQGLPVCAESLCIVEMGCTD-REPDNAAAASTTSTLY 665
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NGALLR V+D SG+LSD R RYLGSRPVKLF+IR Q +EA
Sbjct: 666 LNIGLTNGALLRNVLDPVSGELSDTRTRYLGSRPVKLFRIRMQQSEA 712
>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
Length = 1227
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 154/294 (52%), Positives = 191/294 (64%), Gaps = 49/294 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTS----SDEPAGPVT- 235
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+ D+ P +
Sbjct: 607 VGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGALDDDAPAPRSG 666
Query: 236 --LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG EA
Sbjct: 667 NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEA 720
>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
Length = 1227
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 191/294 (64%), Gaps = 49/294 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTS-----SDEPA--GP 233
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+ D PA
Sbjct: 607 VGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLDDDAPAQRSG 666
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 667 NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 720
>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
Length = 1227
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 191/294 (64%), Gaps = 49/294 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTS-----SDEPA--GP 233
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+ D PA
Sbjct: 607 VGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLDDDAPAQRSG 666
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 667 NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 720
>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
Length = 1227
Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 191/294 (64%), Gaps = 49/294 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTS-----SDEPA--GP 233
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+ D PA
Sbjct: 607 VGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLDDDAPAQRSG 666
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 667 NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 720
>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
Length = 1228
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 155/295 (52%), Positives = 192/295 (65%), Gaps = 50/295 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSS------DEPA--G 232
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T++ D PA
Sbjct: 607 VGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNASGADEDVPAQRS 666
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 667 GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 721
>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
[Rhipicephalus pulchellus]
Length = 1259
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/287 (52%), Positives = 195/287 (67%), Gaps = 49/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL C+ +GD+++VQVYP+GIRHI
Sbjct: 469 DYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCAQIGDDALVQVYPEGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ + KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWRTPGKKAIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E ++ +M ++++CM+L++ P+GEQ SRFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTDRREMSADIICMSLASVPTGEQRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL ++Q LP ESL ++EMG ++ ++ + G LY
Sbjct: 607 VGLADNTVRIISLDPSDCLSPLSMQALPATPESLSIVEMGMTEVETTGQ-------GILY 659
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+DQ +GDLSD R RYLGSRPVKLFK+R QG++A
Sbjct: 660 LNIGLQNGVLLRTVLDQVTGDLSDTRTRYLGSRPVKLFKVRMQGSDA 706
>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
Length = 1227
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 191/294 (64%), Gaps = 49/294 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSS-----DEPA--GP 233
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T++ D PA
Sbjct: 607 VGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNAGADDDVPAQRSG 666
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG EA
Sbjct: 667 SNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEA 720
>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
Length = 1227
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/294 (52%), Positives = 191/294 (64%), Gaps = 49/294 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P TG L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-TGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTS-----SDEPA--GP 233
VGL+DNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+ D PA
Sbjct: 607 VGLSDNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGGLDDDAPAQRSG 666
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 667 NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 720
>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
Length = 1227
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/294 (52%), Positives = 190/294 (64%), Gaps = 49/294 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTLCC+A+GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK I +C
Sbjct: 528 ------------RSDKR----------------------------VNEWKAPGKKSITKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VI L G L+YFEM P +G L+E +E +M +E++CMAL P GEQ S FLA
Sbjct: 548 AVNQRQVVITLSGRELVYFEMDP-SGELNEYTERSEMPAEIMCMALGTVPDGEQRSWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTS-----SDEPA--GP 233
VGLADNTVR++SL P +CL ++Q LP AESL ++EMG ++ T+ D PA
Sbjct: 607 VGLADNTVRILSLDPNNCLTPCSMQALPSPAESLCLVEMGHTESTTQGALDDDAPAQRSG 666
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG EA
Sbjct: 667 SNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEA 720
>gi|260819270|ref|XP_002604960.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
gi|229290289|gb|EEN60970.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
Length = 1049
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 190/287 (66%), Gaps = 46/287 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G+++++Q+YP+GIRHI
Sbjct: 469 EFDAYIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLIGEDALLQIYPEGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ + KK IV+C
Sbjct: 528 ------------RSDKR----------------------------VNEWRTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M +EV+CMAL+N P GEQ RFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKEMSAEVICMALANVPVGEQRCRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL D+TVR+ISL P DCL+ ++Q LP ESL +++MG + P + L+
Sbjct: 607 VGLTDDTVRIISLDPADCLQPLSMQALPATPESLCILQMGGGEGIDDTGPRNTM----LF 662
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+DQ +GDLSD R RYLGSRPVKLF+++ QGNEA
Sbjct: 663 LNIGLQNGVLLRTVLDQITGDLSDTRTRYLGSRPVKLFQVKMQGNEA 709
>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
purpuratus]
Length = 949
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 192/287 (66%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL S +GD++++Q+YPDGIRHI
Sbjct: 201 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSSSLIGDDALLQIYPDGIRHIR 260
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 261 A-------------DKR----------------------------VNEWKTPGKKSIVKC 279
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG ++YFEM P TG L+E +E +M ++V CM+L+ PSGEQ +RFLA
Sbjct: 280 AVNQRQVVIALTGGEMVYFEMDP-TGQLNEYTERKEMNADVKCMSLATVPSGEQRARFLA 338
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL DCL+ ++Q LP AE+L +IEMG ++ + +E + G L+
Sbjct: 339 VGLDDNTVRVISLDQSDCLQPLSMQALPAPAEALCIIEMGGTE--AREETGERGSSGGLF 396
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLRMV+D +GDLSD R RYLGSRPVKLF+I QG+EA
Sbjct: 397 LNIGLQNGVLLRMVLDSVTGDLSDTRTRYLGSRPVKLFRINMQGSEA 443
>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
Length = 1215
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/287 (53%), Positives = 187/287 (65%), Gaps = 46/287 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQ+YPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ K KK IVRC
Sbjct: 528 ------------RSDKR----------------------------VNEWKTPGKKTIVRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E ++ S+V+CM L PSGEQ RFLA
Sbjct: 548 AVNQRQVVIALSGGELVYFEMDP-TGQLNEYTERKELSSDVVCMGLGRVPSGEQRCRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL ++Q LP ESL ++EMG + E A + G L+
Sbjct: 607 VGLNDNTVRIISLDPTDCLSPLSMQALPASPESLCIVEMGGA--VEGQEEAH-INHG-LF 662
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF+I QG+++
Sbjct: 663 LNIGLQNGVLLRAVLDNVTGDLSDTRTRYLGSRPVKLFRISMQGSDS 709
>gi|256075924|ref|XP_002574265.1| Splicing factor 3B subunit 3 5' fragment [Schistosoma mansoni]
Length = 982
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/290 (51%), Positives = 188/290 (64%), Gaps = 45/290 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 432 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI- 490
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V+ + KK I +C
Sbjct: 491 ------------RSDKR----------------------------VNVWRAPGKKTITKC 510
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN+RQ+VIAL GG L+YFEM TG L+E +E +M ++V+CMAL P+ EQ SRFLA
Sbjct: 511 AVNRRQVVIALTGGELVYFEMD-MTGQLNEYTERKEMPADVICMALGRIPANEQRSRFLA 569
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSD---EPAGPVTLG 237
VGLADNTVR++SL P DCL +QG+P ESL ++EMG ++P+ S E + G
Sbjct: 570 VGLADNTVRILSLDPSDCLTPLTMQGIPSTPESLCIVEMGTNEPSPSTDDGESEATSSGG 629
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LY+ +GL NG LLR+++D +G+LSD R RYLG+RPVKLF+I QG EA
Sbjct: 630 ILYMNIGLINGVLLRVILDPVTGELSDTRTRYLGTRPVKLFRIMMQGGEA 679
>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
Length = 1073
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/290 (51%), Positives = 188/290 (64%), Gaps = 45/290 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 432 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI- 490
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V+ + KK I +C
Sbjct: 491 ------------RSDKR----------------------------VNVWRAPGKKTITKC 510
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN+RQ+VIAL GG L+YFEM TG L+E +E +M ++V+CMAL P+ EQ SRFLA
Sbjct: 511 AVNRRQVVIALTGGELVYFEMD-MTGQLNEYTERKEMPADVICMALGRIPANEQRSRFLA 569
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSD---EPAGPVTLG 237
VGLADNTVR++SL P DCL +QG+P ESL ++EMG ++P+ S E + G
Sbjct: 570 VGLADNTVRILSLDPSDCLTPLTMQGIPSTPESLCIVEMGTNEPSPSTDDGESEATSSGG 629
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LY+ +GL NG LLR+++D +G+LSD R RYLG+RPVKLF+I QG EA
Sbjct: 630 ILYMNIGLINGVLLRVILDPVTGELSDTRTRYLGTRPVKLFRIMMQGGEA 679
>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
(Spliceosome-associated protein 130) (SAP 130)
(Pre-mRNA-splicing factor SF3b 130 kDa subunit)
(SF3b130) (STAF130) [Ciona intestinalis]
Length = 1216
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/287 (51%), Positives = 185/287 (64%), Gaps = 46/287 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFD+YI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G+N++VQVYPDGIRHI
Sbjct: 469 EFDSYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGENALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I+RC
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTILRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM ++G L+E +E +M SEV+CM LS P EQ +RFLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMD-QSGQLNEYTERKEMNSEVVCMDLSKVPPTEQRTRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLADNTVR+ISL P DCL+ ++Q LP ES+ +IE+G + DE G L
Sbjct: 607 VGLADNTVRIISLDPTDCLQPLSMQALPATPESVCIIEIGGGE----DETGAQKASGGLV 662
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR +D +GDLSD R RYLG+R VKLF++ QG++A
Sbjct: 663 LNIGLQNGVLLRTTLDNVTGDLSDTRTRYLGTRAVKLFRVLTQGSDA 709
>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
Length = 1287
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 187/291 (64%), Gaps = 54/291 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIG+TVEEV+ SGF +GD+++VQVYPDGIRHI
Sbjct: 542 EFDAYIIVSFVNATLVLSIGDTVEEVTDSGF--------LVPLGDDALVQVYPDGIRHIR 593
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I++C
Sbjct: 594 A-------------DKR----------------------------VNEWKAPGKKTIMKC 612
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E +M SEV+CMAL + PSGEQ S FLA
Sbjct: 613 AVNQRQVVIALSGGELVYFEMDP-TGQLNEYTERKKMPSEVMCMALGSVPSGEQRSWFLA 671
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMG----ASDPTSSDEPAGPVTL 236
VGLADNTVR+ISL P DCL +++Q LP AESL ++EMG A++ D+ A T
Sbjct: 672 VGLADNTVRIISLDPSDCLSPRSMQALPSAAESLCIVEMGTVETAANDDDDDDDAPLKTS 731
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
G +YL +GL NG LLR V+D SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 732 GCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIQMQGSEA 782
>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
[Cavia porcellus]
Length = 1215
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/287 (51%), Positives = 184/287 (64%), Gaps = 46/287 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 469 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKTPGKKTIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P +G L+E +E +M ++V+CM+L+N GEQ SRF
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-SGQLNEYTERKEMSADVVCMSLANVSPGEQRSRFPG 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
GL R+IS P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 607 CGLW-TYCRIIS-DPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 662
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GDLSD R RYLGSRPVKLF++R QG EA
Sbjct: 663 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEA 709
>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
Length = 1216
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/287 (50%), Positives = 179/287 (62%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D+YI+VSF NATLVLSIGETVEEV+ SGF GTTPTL C A+G +++VQVYPDGIRHI
Sbjct: 469 DYDSYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK IV+C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKSIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG L+YFEM P TG L+E +E ++ S+V CMAL + +GEQ + FLA
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDP-TGQLNEYTERKKLSSDVSCMALGSVATGEQRAWFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL +++Q LP ESL ++ D+P L+
Sbjct: 607 VGLVDNTVRIISLDPADCLAPRSMQALPASPESLCIV----------DQPFESGAKSALH 656
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR +D SGDL+D R RYLGSRPVKLFK+R Q EA
Sbjct: 657 LNIGLSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEA 703
>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
Length = 1208
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 184/287 (64%), Gaps = 46/287 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIVVSF NATLVLSIGE+VEEVS SGF GTTPTL C +GD++++QVY +GIRH+
Sbjct: 469 EYDAYIVVSFVNATLVLSIGESVEEVSDSGFLGTTPTLHCCQIGDDALLQVYANGIRHVR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ K KK I +C
Sbjct: 529 A-------------DKR----------------------------VNEWKAPGKKIISKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN RQ+ IAL GG L+YFEM +G L+E +E + SEV+CM++ + P GE+ RFLA
Sbjct: 548 AVNNRQVAIALTGGELVYFEMDL-SGQLNEYTERREFSSEVICMSIGSVPVGEKRCRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLAD+TVR+ISL P DCL+ ++Q LP + ESL ++ MG+ D + S++ L Y
Sbjct: 607 VGLADHTVRMISLDPSDCLQPMSMQALPTVPESLCIVAMGSGDSSESEQGV----LSTYY 662
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR V+D +GD+SD R RYLGSRPV+LFK++ Q +EA
Sbjct: 663 LNIGLQNGVLLRSVLDSVTGDMSDTRTRYLGSRPVRLFKVKIQNSEA 709
>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
Length = 1213
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/284 (50%), Positives = 181/284 (63%), Gaps = 45/284 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E DAYIVVSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G+++++Q+YPDGIRHI
Sbjct: 461 EQDAYIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALLQIYPDGIRHI- 519
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SD++ V++ K KK I++C
Sbjct: 520 ------------RSDRR----------------------------VNEWKTPGKKNIIQC 539
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN+RQIVIAL G L+YFE+ ++G L+E +E +M ++V+CMAL +GEQ SRFLA
Sbjct: 540 AVNERQIVIALTGNELVYFELD-QSGQLNEYTERKEMSADVVCMALGPVHAGEQRSRFLA 598
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL +IEMG T E G L+
Sbjct: 599 VGLIDNTVRIISLDPNDCLEPLSMQALPAAGESLCIIEMGG---TEVGEKGTAGNAGGLF 655
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L +GL NG LLR V+D +GDLSD R+RYLGS+PVKLF ++ G
Sbjct: 656 LNIGLANGVLLRTVLDSVTGDLSDTRIRYLGSKPVKLFNVKTYG 699
>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
queenslandica]
Length = 1214
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/289 (47%), Positives = 185/289 (64%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FD+YIVVSF NATL+LSIGETVEEV+ SGF GTTPTL CS +GD++++Q+YP+GIRHI
Sbjct: 468 DFDSYIVVSFMNATLILSIGETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHI- 526
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ V++ + K+ I +C
Sbjct: 527 ------------RSDKR----------------------------VNEWRSPGKRLIRQC 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN+ Q+VIAL GG ++YFEM ++G L+E +E +M +EV+C++L + P G+Q RFLA
Sbjct: 547 AVNEHQVVIALSGGEIVYFEMD-QSGQLNEYTERKEMTAEVICISLGSVPPGQQRCRFLA 605
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGA--SDPTSSDEPAGPVTLGN 238
VGL+D TVR+ISL P D L+ ++Q LP L ESL ++ M SD T+ V+ G
Sbjct: 606 VGLSDQTVRIISLDPHDTLQPLSMQALPALPESLCIVNMSGNVSDDTT-------VSTGG 658
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L +GLQNG LLR +D +GDLSD R RYLG+RPVKLF++R QG E
Sbjct: 659 LFLNIGLQNGVLLRTALDNVTGDLSDTRTRYLGTRPVKLFRVRIQGTEG 707
>gi|402579535|gb|EJW73487.1| hypothetical protein WUBG_15606 [Wuchereria bancrofti]
Length = 254
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 184/287 (64%), Gaps = 51/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FD++IVVSF NATLVLSIGETVEEV+ SGF GTTPTL C+ +GD++++QVYPDGIRHI
Sbjct: 12 KFDSHIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIR 71
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ K K+ I++C
Sbjct: 72 A-------------DRR----------------------------VNEWKAPGKRTIMKC 90
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A+N+RQ+ IAL GG L+YFE+ TG L+E +E ++ ++VLCM+LS P GE SRFL
Sbjct: 91 ALNRRQVAIALAGGELVYFELDV-TGQLNEYTERRELPADVLCMSLSEIPEGELRSRFLT 149
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLAD TVR+ISL PQDCL ++Q LP ES++++EM ++ S+ ++
Sbjct: 150 VGLADKTVRIISLDPQDCLSPLSMQALPSEPESIIVLEMFGTEIQSA---------STVH 200
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR VDQ +G+L+DNR RYLG++ VKLF++R Q +A
Sbjct: 201 LNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFRVRIQSKDA 247
>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
occidentalis]
Length = 1223
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 187/295 (63%), Gaps = 53/295 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIVVSF NATLVLSIGETVEEV+ SGF GTTPTL C +G +++VQ+YP+GIRHI
Sbjct: 469 EYDAYIVVSFINATLVLSIGETVEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + S KK IV+C
Sbjct: 529 A-------------DRR----------------------------VNEWRTSGKKLIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG LIYFEM +G L+E +E +M S+VLCMAL + P+GEQ ++FLA
Sbjct: 548 AVNQRQVVIALTGGELIYFEMD-SSGQLNEYAERKEMNSDVLCMALGSVPAGEQRTKFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDL-AESLVMIEMGAS-------DPTSSDEPAG 232
VG +D TV +ISL P+ CL ++QG+ + ESL ++E+ A D + +E +G
Sbjct: 607 VGSSDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVELKACFLPSISVDMSGHEEGSG 666
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LYL +GLQNG L RMV+D +GD+SD R R+LGSR VKLFKI+ QG +A
Sbjct: 667 S---SALYLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKMQGTDA 718
>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
occidentalis]
Length = 1211
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 140/288 (48%), Positives = 182/288 (63%), Gaps = 51/288 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIVVSF NATLVLSIGETVEEV+ SGF GTTPTL C +G +++VQ+YP+GIRHI
Sbjct: 469 EYDAYIVVSFINATLVLSIGETVEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + S KK IV+C
Sbjct: 529 A-------------DRR----------------------------VNEWRTSGKKLIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVNQRQ+VIAL GG LIYFEM +G L+E +E +M S+VLCMAL + P+GEQ ++FLA
Sbjct: 548 AVNQRQVVIALTGGELIYFEMD-SSGQLNEYAERKEMNSDVLCMALGSVPAGEQRTKFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDL-AESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VG +D TV +ISL P+ CL ++QG+ + ESL +++M + S L
Sbjct: 607 VGSSDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVDMSGHEEGSGSSA--------L 658
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
YL +GLQNG L RMV+D +GD+SD R R+LGSR VKLFKI+ QG +A
Sbjct: 659 YLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKMQGTDA 706
>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
Length = 1197
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 183/287 (63%), Gaps = 51/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FD++IVVSF NATLVLSIGETVEEV+ SGF GTTPTL C+ +GD++++QVYPDGIRHI
Sbjct: 470 KFDSHIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIR 529
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ K K+ I++C
Sbjct: 530 A-------------DRR----------------------------VNEWKAPGKRTIMKC 548
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A+N+RQ+ IAL GG L+YFE+ TG L+E +E ++ ++VLCM+LS P GE SRFL
Sbjct: 549 ALNRRQVAIALAGGELVYFELDV-TGQLNEYTERRELPADVLCMSLSEIPEGELRSRFLT 607
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLAD TVR+ISL PQDCL ++Q LP ES++++EM ++ S+ ++
Sbjct: 608 VGLADKTVRIISLDPQDCLSPLSMQALPSEPESIIVLEMFGTETQSA---------STVH 658
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR VDQ +G+L+DNR RYLG++ VKLF +R Q +A
Sbjct: 659 LNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFHVRIQSKDA 705
>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
Length = 1214
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 181/287 (63%), Gaps = 51/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D++IVVSF NATLVLSIGETVEEV+ SGF GTTPTL C +GD++++QVYPDGIRHI
Sbjct: 470 KYDSHIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCGLIGDDALLQVYPDGIRHIR 529
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ K K+ I++C
Sbjct: 530 A-------------DRR----------------------------VNEWKAPGKRTIIKC 548
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A+N+RQ+ IAL GG ++YFE+ TG L+E +E ++ ++VLCM+LS P GE SRFL
Sbjct: 549 ALNRRQVAIALAGGEIVYFELDV-TGQLNEYTERRELPADVLCMSLSEIPEGELRSRFLT 607
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGLAD TVR+ISL PQDCL ++Q LP ES++++EM + S+ ++
Sbjct: 608 VGLADKTVRIISLDPQDCLAPLSMQALPSEPESIIVLEMFGGEGQSA---------STVH 658
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR VDQ +G+L+DNR RYLG+R V LF++R Q +A
Sbjct: 659 LNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTRSVNLFRVRIQSKDA 705
>gi|335310432|ref|XP_003362030.1| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
Length = 701
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/246 (51%), Positives = 158/246 (64%), Gaps = 44/246 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 468 EFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIR 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +V++ K KK IV+CAVNQRQ+VIAL GG L+YFEM P
Sbjct: 528 ADK---RVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDP--------------- 569
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+G L+E +E +M ++V+CM+L+N P GEQ SRFLA
Sbjct: 570 ------------------------SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLA 605
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL DNTVR+ISL P DCL+ ++Q LP ESL ++EMG ++ DE ++G LY
Sbjct: 606 VGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLY 663
Query: 241 LYVGLQ 246
L +GLQ
Sbjct: 664 LNIGLQ 669
>gi|313235544|emb|CBY10999.1| unnamed protein product [Oikopleura dioica]
Length = 1185
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 172/287 (59%), Gaps = 58/287 (20%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+ D+YI+VSF NATLVLSIGETVEE++ SGF GTTPTL MG++++VQ+YP+GIRHI
Sbjct: 469 DHDSYIIVSFVNATLVLSIGETVEEITDSGFLGTTPTLSSGLMGEDALVQIYPEGIRHI- 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SD++ V++ + D+K+IVRC
Sbjct: 528 ------------RSDRR----------------------------VNEWRAPDRKQIVRC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N++Q+VIAL GG ++YFEM P TG L+E +E + SE++ + + + P+GEQ RFLA
Sbjct: 548 ACNRQQVVIALTGGEIVYFEMDP-TGQLNEYTERREFGSEIIALDVGDVPAGEQRCRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL+D TVR+ISL P DCL+ + +Q LP + + + + E G
Sbjct: 607 VGLSDGTVRIISLDPNDCLQPRTMQALPTVPQDVAITEHK----------------GQYV 650
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG LLR +D +G++SD R RYLG++ VKL+K+ +G +
Sbjct: 651 LQIGLQNGVLLRTTIDSVTGEISDTRTRYLGTKAVKLYKVVTEGENS 697
>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
Length = 1181
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 174/292 (59%), Gaps = 58/292 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FD++IVVSF NATLVLSIGETVEEV+ SGF GTTPTL C+ +GD+++
Sbjct: 434 KFDSHIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALC----------- 482
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+R + ++ L GR H V+ ++++C
Sbjct: 483 -------------------IRTVFDILGLIGELMSGR------HLVN-------VQLLKC 510
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A+N+RQ+ IAL GG L+YFE+ TG L+E +E ++ ++VLCM+LS P GE SRFL
Sbjct: 511 ALNRRQVAIALAGGELVYFELDV-TGQLNEYTERRELPADVLCMSLSEIPEGELRSRFLT 569
Query: 181 VGLADNTVRLISLAPQDCLKQKNL-----QGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235
VGLAD TVR+ISL PQDCL L Q LP ES++++EM ++ S+
Sbjct: 570 VGLADKTVRIISLDPQDCLSPLQLISFSMQALPSEPESIIVLEMFGTETQSA-------- 621
Query: 236 LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++L +GLQNG LLR VDQ +G+L+DNR RYLG++ VKLF++R Q +A
Sbjct: 622 -STVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKLFRVRIQSKDA 672
>gi|17508021|ref|NP_491953.1| Protein TEG-4 [Caenorhabditis elegans]
gi|351060889|emb|CCD68627.1| Protein TEG-4 [Caenorhabditis elegans]
Length = 1220
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 168/287 (58%), Gaps = 51/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D+YIVVSF NATL L+IG+TVEE S SGF TTPT+ C+ +GD+S+VQ+Y +GIRHI
Sbjct: 469 QYDSYIVVSFVNATLALTIGDTVEEASDSGFLPTTPTIGCAMIGDDSLVQIYSEGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ +++ K +++IV+C
Sbjct: 529 A-------------DKR----------------------------INEWKAPPRRQIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN+RQ+ +AL GG L+YFE+ G L+E +E +++ CM S GE SRFLA
Sbjct: 548 AVNRRQVAVALTGGELVYFELDL-NGTLNEFTERKLFNADIACMTFSEISEGELNSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G DN VR+ISL P D L + Q LP ES+++I+ T +++ G + ++
Sbjct: 607 LGTVDNAVRIISLDPNDMLMPLSTQSLPCPPESILLID------TPNEDGKG---VAAVH 657
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG L R VD +G + D R RYLG+RPVKLFK++CQG A
Sbjct: 658 LNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSA 704
>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
Length = 1207
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/287 (44%), Positives = 167/287 (58%), Gaps = 47/287 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QVYP+GIRHI
Sbjct: 468 EFDAYIVVSFLNATLVLSIGETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHI- 526
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ +VR +++ K KK IV+
Sbjct: 527 ----------------RSLVR------------------------INEWKTPGKKTIVKV 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VI L GG LIYFEM P TG L E E +M +V C+A+ P G Q SRFLA
Sbjct: 547 GSNRMQVVIGLSGGELIYFEMDP-TGQLMEI-EKREMSGDVACLAIGPVPEGRQRSRFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG DNT+R++SL P DC+ ++Q + ESL+++E+ AS T ++ G V +++
Sbjct: 605 VGSYDNTIRILSLDPNDCMHILSVQMVASPPESLLLLEVQAS--TGGED--GAVYPASVF 660
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L GLQNG LLR VD +G LS R R+LG R KLF +G +A
Sbjct: 661 LNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQA 707
>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
Length = 1207
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/287 (44%), Positives = 167/287 (58%), Gaps = 47/287 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QVYP+GIRHI
Sbjct: 468 EFDAYIVVSFLNATLVLSIGETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVYPNGIRHI- 526
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ +VR +++ K KK IV+
Sbjct: 527 ----------------RSLVR------------------------INEWKTPGKKTIVKV 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VI L GG LIYFEM P TG L E E +M +V C+A+ P G Q SRFLA
Sbjct: 547 GSNRMQVVIGLSGGELIYFEMDP-TGQLMEI-EKREMSGDVACLAIGPVPEGRQRSRFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG DNT+R++SL P DC+ ++Q + ESL+++E+ AS T ++ G V +++
Sbjct: 605 VGSYDNTIRILSLDPNDCMHILSVQMVASPPESLLLLEVQAS--TGGED--GAVYPASVF 660
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L GLQNG LLR VD +G LS R R+LG R KLF +G +A
Sbjct: 661 LNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRAPKLFATSVRGRQA 707
>gi|341886293|gb|EGT42228.1| CBN-TEG-4 protein [Caenorhabditis brenneri]
Length = 1006
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 166/287 (57%), Gaps = 51/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D+YIVVSF NATL L+IG+TVEE S SGF TTPT+ CS +GD+S+VQ+Y +GIRHI
Sbjct: 469 QYDSYIVVSFVNATLALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYAEGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ +++ K +++IV+C
Sbjct: 529 A-------------DKR----------------------------INEWKAPPRRQIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
VN+RQ+ +AL GG L+YFE+ G L+E +E +++ CM S GE SRFLA
Sbjct: 548 CVNRRQVAVALSGGELVYFELD-LNGTLNEFTERKLFNADIACMTFSEISEGELNSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G DN VR+ISL P D L + Q LP ES+++I+ T +D+ G + ++
Sbjct: 607 LGTVDNAVRIISLDPNDMLMPLSTQNLPCPPESILLID------TPNDDGKG---VAAVH 657
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG L R VD +G + D R RYLG+RPVKLFK++ QG A
Sbjct: 658 LNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQVQGRSA 704
>gi|341886300|gb|EGT42235.1| hypothetical protein CAEBREN_28831 [Caenorhabditis brenneri]
Length = 1005
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 166/287 (57%), Gaps = 51/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D+YIVVSF NATL L+IG+TVEE S SGF TTPT+ CS +GD+S+VQ+Y +GIRHI
Sbjct: 469 QYDSYIVVSFVNATLALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYAEGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ +++ K +++IV+C
Sbjct: 529 A-------------DKR----------------------------INEWKAPPRRQIVKC 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
VN+RQ+ +AL GG L+YFE+ G L+E +E +++ CM S GE SRFLA
Sbjct: 548 CVNRRQVAVALSGGELVYFELD-LNGTLNEFTERKLFNADIACMTFSEISEGELNSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G DN VR+ISL P D L + Q LP ES+++I+ T +D+ G + ++
Sbjct: 607 LGTVDNAVRIISLDPNDMLMPLSTQNLPCPPESILLID------TPNDDGKG---VAAVH 657
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG L R VD +G + D R RYLG+RPVKLFK++ QG A
Sbjct: 658 LNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQVQGRSA 704
>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
Length = 1214
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 167/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGE VEEV+ SGF TTP+L S +GD+S++QV+P+GIRHI
Sbjct: 467 EFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHI- 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ IV+
Sbjct: 526 --------------------------------REDGR--------INEWRTPGKRSIVKV 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFE TG L E E +M +V C+ ++ P G + SRFLA
Sbjct: 546 GYNRLQVVIALSGGELIYFEAD-MTGQLMEV-EKHEMSGDVACLDIAPVPEGRKRSRFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG DNTVR++SL P DCL+ ++Q + ESL+ +E+ AS +D PA N
Sbjct: 604 VGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPA------N 657
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L GLQNG L R VVD +G LSD+R R+LG +P KLF I +G A
Sbjct: 658 LFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSA 706
>gi|308505958|ref|XP_003115162.1| CRE-TEG-4 protein [Caenorhabditis remanei]
gi|308259344|gb|EFP03297.1| CRE-TEG-4 protein [Caenorhabditis remanei]
Length = 1013
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 168/292 (57%), Gaps = 56/292 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQV-----YPDG 55
++D+YIVVSF NATL L+IG+TVEE S SGF TTPT+ CS +GD+S+VQV Y +G
Sbjct: 469 QYDSYIVVSFVNATLALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQVIRNQIYSEG 528
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKK 115
IRHI A DK+ +++ K ++
Sbjct: 529 IRHIRA-------------DKR----------------------------INEWKVPPRR 547
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQM 175
+IV+CAVN+RQ+ +AL GG L+YFE+ G L+E +E +++ CM S GE
Sbjct: 548 QIVKCAVNRRQVAVALSGGELVYFELD-LNGTLNEFTERKLFNADIACMTFSEISEGELN 606
Query: 176 SRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235
SRFLA+G DN VR+ISL P D L + Q LP ES+++I+ T +++ G
Sbjct: 607 SRFLALGTVDNAVRIISLDPNDMLMPLSTQNLPCPPESILLID------TPNEDGKG--- 657
Query: 236 LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ ++L +GLQNG L R VD +G + D R RYLG+RPVKLFK++CQG A
Sbjct: 658 VAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKVQCQGRSA 709
>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
Length = 1171
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 151/245 (61%), Gaps = 46/245 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEV+ SGF GTTPTL CS +G+ ++VQ+YPDGIRHI
Sbjct: 469 EFDAYIVVSFINATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGEEALVQIYPDGIRHIR 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +V++ K KK IV+ AVN+RQ+VIAL GG ++YFEM
Sbjct: 529 ADK---RVNEWKAPGKKTIVKSAVNERQVVIALTGGEVVYFEMD---------------- 569
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+G L+E +E +M ++V CMAL GE SRFLA
Sbjct: 570 -----------------------SSGQLNEYTERKEMSADVQCMALGTILHGELRSRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+GL+DNTVR+ISL PQDCL ++Q LP + ESL ++EMG + S+ G ++G L+
Sbjct: 607 IGLSDNTVRIISLDPQDCLTPLSMQALPAMPESLCIVEMGGKEGAESE--GG--SMGGLF 662
Query: 241 LYVGL 245
L +GL
Sbjct: 663 LNIGL 667
>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/289 (44%), Positives = 165/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P GIRHI
Sbjct: 468 EFDAYIVVSFVNATLVLSIGETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIR 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A GR +++ K KK IV+
Sbjct: 528 AD---------------------------------GR--------INEWKTPGKKTIVKV 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFEM +G L E E M +V C+ ++ P G Q SRFLA
Sbjct: 547 GYNRMQVVIALSGGELIYFEMD-MSGQLMEI-EKRDMTGDVACLHIAPVPEGRQRSRFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASD--PTSSDEPAGPVTLGN 238
VG D+T+R++SL P DC++ ++Q + ESL+++E+ AS +D PA +
Sbjct: 605 VGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGADHPA------S 658
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++L GLQNG LLR VD +G LSD R R+LG R KLF R +G A
Sbjct: 659 VFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSARVRGRRA 707
>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
Length = 1214
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 166/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P GIRHI
Sbjct: 467 EFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI- 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ IV+
Sbjct: 526 --------------------------------REDGR--------INEWRTPGKRTIVKV 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFE+ TG L E E +M +V C+ ++ P G Q SRFLA
Sbjct: 546 GSNRLQVVIALSGGELIYFEVD-MTGQLMEV-EKHEMSGDVACLDIAPVPEGRQRSRFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG DNT+R++SL P DC++ ++Q + ESL+ +E+ AS +D PA +
Sbjct: 604 VGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPA------S 657
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L GLQNG L R VVD +G LSD R R+LG R KLF + +G A
Sbjct: 658 LFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIVRGRRA 706
>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
Length = 1218
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 167/287 (58%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D+YIVVSF NATL L+IG+TVEE S SGF TTPT+ CS +GD+S+VQ+Y +GIRHI
Sbjct: 468 QYDSYIVVSFVNATLTLTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIYSEGIRHIR 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ +++ K +++IV+C
Sbjct: 528 A-------------DKR----------------------------INEWKAPPRRQIVKC 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN+RQ+ +AL GG L+YFE+ G L+E +E +++ CM S GE SRFLA
Sbjct: 547 AVNRRQVAVALSGGELVYFELD-LNGTLNEFTERKLFNADIACMTFSEISEGELNSRFLA 605
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G DN VR+ISL P D L + Q LP ES+++I+ T +++ G + +++
Sbjct: 606 LGTVDNAVRIISLDPNDMLMPLSTQNLPCPPESILLID------TPNEDGKG---VASVH 656
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GLQNG L R VD +G + D R RYLG+RP KLFK++ QG A
Sbjct: 657 LNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRP-KLFKVQVQGRSA 702
>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium
dendrobatidis JAM81]
Length = 1213
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 165/283 (58%), Gaps = 52/283 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF NATLVLSIGETVEEV+ +G TT T+ +G+N++VQVYP GIR+I A
Sbjct: 488 YDSYIIISFINATLVLSIGETVEEVTDTGVLATTSTITVGQLGENALVQVYPQGIRYIRA 547
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
DK+ VS+ K + IV A
Sbjct: 548 -------------DKR----------------------------VSEWKAPTNQSIVSAA 566
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
NQRQ+V+AL ++YFE+ +G L+E + +M S VLC++LS P+G +RFLA+
Sbjct: 567 CNQRQVVVALSNNEIVYFELD-VSGHLNEFQDRKEMSSRVLCLSLSPIPTGRLRARFLAI 625
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G AD TVR++SL P+ CL ++Q L +SL MI+M DPT+ + NL+L
Sbjct: 626 GCADLTVRILSLDPESCLHPLSMQALSAPPDSLAMIDM--PDPTTG--------VSNLFL 675
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
+GL NG LL+ VD SG++SD RMR+LGSR VKLF ++ QG
Sbjct: 676 NIGLANGVLLKTCVDSGSGNMSDTRMRFLGSRGVKLFLLKIQG 718
>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 167/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++Q++P+GIRHI
Sbjct: 467 EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHI- 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ IV+
Sbjct: 526 --------------------------------REDGR--------INEWRTPGKRTIVKV 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFE+ TG L E E +M +V C+ ++ P G Q SRFLA
Sbjct: 546 GSNRLQVVIALSGGELIYFEVD-MTGQLMEV-EKHEMSGDVACLDIAPVPEGRQRSRFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG DNT+R++SL P DC++ ++Q + ESL+ +E+ AS +D PA +
Sbjct: 604 VGSYDNTIRVLSLDPDDCMQILSVQSVSAPPESLLFLEVQASIGGEDGADHPA------S 657
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L GLQ G L R VVD +G LSD+R R+LG R KLF I +G A
Sbjct: 658 LFLNAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFAINVRGRRA 706
>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
Length = 1213
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 167/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++Q++P+GIRHI
Sbjct: 467 EFDAYIVVSFNNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQIHPNGIRHI- 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ IV+
Sbjct: 526 --------------------------------REDGR--------INEWRTPAKRTIVKV 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFE+ TG L E E +M +V C+ ++ P G Q SRFLA
Sbjct: 546 GSNRLQVVIALSGGELIYFEVD-MTGQLMEV-EKHEMSGDVACLDIAPVPEGRQRSRFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG DNT+R++SL P DC++ ++Q + ESL+ +E+ AS +D PA +
Sbjct: 604 VGSYDNTIRVLSLDPDDCMQILSVQSVSAPPESLLFLEVQASIGGEDGADHPA------S 657
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L GLQ G L R VVD +G LSD+R R+LG R KLF I +G A
Sbjct: 658 LFLNAGLQTGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSINVRGRRA 706
>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 165/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P+GIRHI
Sbjct: 467 EFDAYIVVSFTNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHI- 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ I +
Sbjct: 526 --------------------------------REDGR--------INEWRTPGKRSISKV 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+VIAL GG LIYFEM TG L E E +M +V C+ ++ P G Q SRFLA
Sbjct: 546 GSNTLQVVIALSGGELIYFEMDV-TGQLMEV-EKHEMSGDVACLDIAPVPEGRQRSRFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG D T+R++SL P DC++ ++Q + ESL+ +E+ AS +D PA +
Sbjct: 604 VGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPA------S 657
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L GLQNG + R VVD +G LSD+R R+LG R KLF I +G A
Sbjct: 658 LFLNAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRA 706
>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1214
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 164/289 (56%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P GIRHI
Sbjct: 468 EFDAYIVVSFVNATLVLSIGETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHIR 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A GR +++ K KK IV+
Sbjct: 528 AD---------------------------------GR--------INEWKTPGKKTIVKV 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFEM +G L E E M +V C+ ++ P G Q SRFLA
Sbjct: 547 GYNRMQVVIALSGGELIYFEMD-MSGQLMEI-EKRDMTGDVACLDIAPVPEGRQRSRFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASD--PTSSDEPAGPVTLGN 238
VG D+T+R++SL P DC++ ++Q + ESL+++E+ AS +D PA +
Sbjct: 605 VGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGADHPA------S 658
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++L GLQNG LLR VD +G LSD R R+LG R KLF +G A
Sbjct: 659 VFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSALVRGRRA 707
>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
Length = 1214
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 166/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P+GIRHI
Sbjct: 467 EFDAYIVVSFTNATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHI- 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ I +
Sbjct: 526 --------------------------------REDGR--------INEWRTPGKRTISKV 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFE+ TG L E E +M +V C+ ++ P G Q SRFLA
Sbjct: 546 GSNRLQVVIALSGGELIYFEVDV-TGQLMEV-EKHEMSGDVACLDIAPVPEGRQRSRFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG D T+R++SL P DC++ ++Q + ESL+ +E+ AS +D PA +
Sbjct: 604 VGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPA------S 657
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L GLQNG + R VVD +G LSD+R R+LG R KLF I +G A
Sbjct: 658 LFLNAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRA 706
>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
Length = 1199
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 159/287 (55%), Gaps = 57/287 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF GT PTL S +GD+S++QV+P G+RHI
Sbjct: 470 EFDAYIVVSFTNATLVLSIGETVEEVSDSGFLGTVPTLSASLLGDDSLLQVHPGGLRHIR 529
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ +++ + +K + R
Sbjct: 530 A-------------DKR----------------------------INEWRTPGRKTVTRV 548
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N RQ++IAL GG LIYFE+ +TG L E E ++ +V C+ + P G +RFLA
Sbjct: 549 TTNARQVIIALSGGELIYFELD-QTGQLMEV-EKLETSGDVACLDIGPVPEGHLRNRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL +DCL+ +Q L SL+M+ S G++Y
Sbjct: 607 VGSFDSTVRILSLGAEDCLQTMGVQALAAAPNSLLMLRDDGS--------------GSIY 652
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L VGL NG LLR VD +G LSD R R+LG+RP KL + QG A
Sbjct: 653 LNVGLTNGVLLRADVDSVTGQLSDTRARFLGARPPKLSAVSVQGKAA 699
>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
queenslandica]
Length = 1160
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 156/253 (61%), Gaps = 51/253 (20%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FD+YIVVSF NATL+LSIGETVEEV+ SGF GTTPTL CS +GD++++Q+YP+GIRHI
Sbjct: 468 DFDSYIVVSFMNATLILSIGETVEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHIR 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ +V++ + K+ I +CAVN+ Q+VIAL GG ++YFEM
Sbjct: 528 SDK---RVNEWRSPGKRLIRQCAVNEHQVVIALSGGEIVYFEMD---------------- 568
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
++G L+E +E +M +EV+C++L + P G+Q RFLA
Sbjct: 569 -----------------------QSGQLNEYTERKEMTAEVICISLGSVPPGQQRCRFLA 605
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGA--SDPTSSDEPAGPVTLGN 238
VGL+D TVR+ISL P D L+ ++Q LP L ESL ++ M SD T+ V+ G
Sbjct: 606 VGLSDQTVRIISLDPHDTLQPLSMQALPALPESLCIVNMSGNVSDDTT-------VSTGG 658
Query: 239 LYLYVGLQNGALL 251
L+L +GLQNG ++
Sbjct: 659 LFLNIGLQNGGVI 671
>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
Length = 1212
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 165/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P GIRHI
Sbjct: 467 EFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI- 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ IV+
Sbjct: 526 --------------------------------REDGR--------INEWRTPGKRTIVKV 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG +IYFE+ TG L E E +M +V C+ ++ P G Q SRFLA
Sbjct: 546 GSNRLQVVIALSGGEIIYFEVD-MTGQLMEV-EKQEMSGDVACLDIAPVPEGRQRSRFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG DN +R++SL P DC++ +LQ + ESL+ +E+ AS +D PA +
Sbjct: 604 VGSYDNCIRILSLDPDDCMQVLSLQSVSSPPESLLFLEVQASVGGEDGADHPA------S 657
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L GLQNG L R VVD +G LSD R R+LG R KLF + +G A
Sbjct: 658 LFLNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIIRGRRA 706
>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1201
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/289 (44%), Positives = 165/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P GIRHI
Sbjct: 455 EFDAYIVVSFVNATLVLSIGETVEEVSDSGFLDTTPSLAISLLGDDSLMQVHPSGIRHI- 513
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SD GR +++ K KK IV+
Sbjct: 514 ------------RSD--------------------GR--------INEWKTPGKKTIVKV 533
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFEM +G L E E M +V C+ ++ P G Q SRFLA
Sbjct: 534 GYNRMQVVIALSGGELIYFEMD-MSGQLMEI-EKRDMTGDVACLDIAPVPEGRQRSRFLA 591
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASD--PTSSDEPAGPVTLGN 238
VG D+T+R++SL P DC++ ++Q + ESL+++E+ AS +D PA +
Sbjct: 592 VGSYDSTIRILSLDPDDCMQILSVQAVSSPPESLLLLEVQASTGGEDGADHPA------S 645
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++L GLQNG LLR VD +G LSD R R+LG R KLF +G A
Sbjct: 646 VFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRAPKLFSALVRGRRA 694
>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1214
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 168/289 (58%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI+VSF+NATLVLSIGETVEEV+ SGF TTP+L S +GD+S++QV+P+GIRHI
Sbjct: 468 EFDAYIIVSFNNATLVLSIGETVEEVNNSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHI- 526
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ IV+
Sbjct: 527 --------------------------------REDGR--------INEWRTPGKRTIVKV 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFE+ TG L E E +M +V C+ ++ P G Q SRFLA
Sbjct: 547 GSNRVQVVIALSGGELIYFEVDI-TGQLMEV-EKHEMSGDVACLDIAPVPEGRQRSRFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG DNT+R++SL P DC++ ++Q + ESL+ +E+ AS +D PA +
Sbjct: 605 VGSFDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGREDVADHPA------S 658
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L GLQ+G L R +VD +G LSD+R R+LG R KLF I +G A
Sbjct: 659 LFLNAGLQSGVLFRTLVDMVTGQLSDSRSRFLGLRAPKLFSILVRGRRA 707
>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
Length = 1172
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 160/281 (56%), Gaps = 52/281 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D YIV+SF +ATLVL IGETVEEV+ SGF G+ TL S +GD++++Q++ GIRHI
Sbjct: 432 EADTYIVMSFVDATLVLGIGETVEEVTDSGFLGSVATLSASRIGDDALLQIHAMGIRHI- 490
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
L GR +++ K D+ KI C
Sbjct: 491 --------------------------------LHDGR--------INEWKAPDRTKISHC 510
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN+RQ V+AL G L+YFE+ +G L E SE ++M S+V +AL+ P G Q +RFLA
Sbjct: 511 AVNERQAVVALSNGELVYFELD-RSGQLIEHSERVEMSSQVTALALAPIPEGAQTARFLA 569
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+GL D TVRL+SL DCL ++Q LP A SL M+E+ + EP+G L
Sbjct: 570 LGLDDQTVRLMSLDKSDCLAPLSMQALPGAAASLCMVEVRG----THGEPSG------LS 619
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
L +GL NG L+R VD + DLSD R RYLG+R VKLF ++
Sbjct: 620 LAIGLGNGVLMRSRVDTLTADLSDTRTRYLGARAVKLFPVK 660
>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
C-169]
Length = 1205
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 166/286 (58%), Gaps = 45/286 (15%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYI+VSF+NATLVLSIGETV EV+ SGF GT PTL + D+S++QV+P G+RHI A
Sbjct: 469 FDAYIIVSFTNATLVLSIGETVVEVNDSGFLGTVPTLRTQLLTDDSMLQVHPSGLRHIRA 528
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
D++ V++ + ++ IV+ A
Sbjct: 529 -------------DRR----------------------------VNEWRAPGRRTIVKAA 547
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N++Q+VIAL GG LIYFE+ P TG L E E +M +V+C+ ++ P G Q SRFLAV
Sbjct: 548 TNEQQVVIALSGGELIYFELSP-TGQLMEV-EKKEMAGDVVCLDIAPVPEGRQRSRFLAV 605
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
D++VR++SL P+D + +Q + + ESL+ I+ A+D E A G L+L
Sbjct: 606 ASYDSSVRILSLDPEDMMSALAVQMVSAVPESLLFIDSPAADIAGKGEDASGA--GGLFL 663
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GL NG LLR VD+ +G LSD R R+LG+RP KLF + +G +
Sbjct: 664 NIGLLNGVLLRTEVDKVTGQLSDTRTRFLGTRPPKLFAVSVRGKRS 709
>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
Length = 1214
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 166/289 (57%), Gaps = 51/289 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P+GIRHI
Sbjct: 467 EFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHI- 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ IV+
Sbjct: 526 --------------------------------REDGR--------INEWRTPGKRTIVKV 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFE+ TG L E E +M +V C+ ++ P G Q SRFLA
Sbjct: 546 GSNRLQVVIALSGGELIYFEVD-MTGQLMEV-EKHEMSGDVACLDIAPVPEGRQRSRFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG DNT+R++SL P DC++ ++Q + ESL+ +E+ AS +D PA +
Sbjct: 604 VGSYDNTIRILSLDPDDCMQILSVQSVSAAPESLLFLEVLASVGGEDGADHPA------S 657
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L L +G L R VVD +G LSD+R R+LG R KLF + +G A
Sbjct: 658 LFLNAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVVLRGRRA 706
>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus
A1163]
Length = 1225
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 161/287 (56%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG++PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTA 719
>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus
Af293]
Length = 1225
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 161/287 (56%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG++PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTA 719
>gi|154295205|ref|XP_001548039.1| pre-mRNA splicing factor 3b [Botryotinia fuckeliana B05.10]
Length = 1020
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 157/286 (54%), Gaps = 52/286 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+DAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI A
Sbjct: 489 YDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIRA 548
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
H V++ + IV
Sbjct: 549 D-----------------------------------------HRVNEWAAPQHRSIVAAT 567
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G Q S+FLAV
Sbjct: 568 TNERQVAVALSSGEIVYFEMDSD-GSLAEYDEKKEMSGTVTCLSLGEVPEGRQRSQFLAV 626
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D+TVR++SL P L+ K++Q L +L ++ M SD +G TL YL
Sbjct: 627 GCDDSTVRILSLDPDSTLENKSVQALTSPPNALSIMAM-------SDSSSGGSTL---YL 676
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ QG A
Sbjct: 677 HIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQGQTA 722
>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
Length = 1212
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 157/286 (54%), Gaps = 52/286 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+DAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI A
Sbjct: 489 YDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIRA 548
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
H V++ + IV
Sbjct: 549 D-----------------------------------------HRVNEWAAPQHRSIVAAT 567
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G Q S+FLAV
Sbjct: 568 TNERQVAVALSSGEIVYFEMDSD-GSLAEYDEKKEMSGTVTCLSLGEVPEGRQRSQFLAV 626
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D+TVR++SL P L+ K++Q L +L ++ M SD +G TL YL
Sbjct: 627 GCDDSTVRILSLDPDSTLENKSVQALTSPPNALSIMAM-------SDSSSGGSTL---YL 676
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ QG A
Sbjct: 677 HIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVAVQGQTA 722
>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
Length = 1209
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 161/287 (56%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++Q++P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDSD-GSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LGS+PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTA 719
>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL
1]
gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL
1]
Length = 1209
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 161/287 (56%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG++PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVRGQTA 719
>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
distachyon]
Length = 1228
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/279 (44%), Positives = 158/279 (56%), Gaps = 51/279 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYIVVSF+N TLVLSIGET+EEVS S F TT +L S +G++S++QV+P+GIRHI
Sbjct: 479 FDAYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHI-- 536
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ GR V++ + KK I +
Sbjct: 537 -------------------------------REDGR--------VNEWRTPGKKTITKVG 557
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G Q SRFLAV
Sbjct: 558 SNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGRQRSRFLAV 615
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGNL 239
G DNT+R++SL P DCL+ ++Q + ESL+ +E+ AS +D PA NL
Sbjct: 616 GSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPA------NL 669
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 670 FLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 708
>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
Japonica Group]
gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
Japonica Group]
gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
Length = 1234
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 158/279 (56%), Gaps = 51/279 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYIVVSF+N TLVLSIGET+EEVS S F TT +L S +G++S++QV+P+GIRHI
Sbjct: 484 FDAYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHI-- 541
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ GR V++ + KK I +
Sbjct: 542 -------------------------------REDGR--------VNEWRTPGKKTITKVG 562
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G Q SRFLAV
Sbjct: 563 SNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGRQRSRFLAV 620
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGNL 239
G DNT+R++S+ P DCL+ ++Q + ESL+ +E+ AS +D PA NL
Sbjct: 621 GSFDNTIRILSVDPDDCLQPLSVQSVSSAPESLMFLEVQASVGGEDGADHPA------NL 674
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 675 FLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 713
>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
Length = 1219
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 161/287 (56%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++Q++P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDSD-GSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LGS+PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTA 719
>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
Length = 1224
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 158/279 (56%), Gaps = 51/279 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYIVVSF+N TLVLSIGET+EEVS S F TT +L S +G++S++QV+P+GIRHI
Sbjct: 474 FDAYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHI-- 531
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ GR V++ + KK I +
Sbjct: 532 -------------------------------REDGR--------VNEWRTPGKKTITKVG 552
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G Q SRFLAV
Sbjct: 553 SNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGRQRSRFLAV 610
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGNL 239
G DNT+R++S+ P DCL+ ++Q + ESL+ +E+ AS +D PA NL
Sbjct: 611 GSFDNTIRILSVDPDDCLQPLSVQSVSSAPESLMFLEVQASVGGEDGADHPA------NL 664
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 665 FLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 703
>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
Length = 845
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 158/279 (56%), Gaps = 51/279 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYIVVSF+N TLVLSIGET+EEVS S F TT +L S +G++S++QV+P+GIRHI
Sbjct: 95 FDAYIVVSFANVTLVLSIGETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVHPNGIRHI-- 152
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ GR V++ + KK I +
Sbjct: 153 -------------------------------REDGR--------VNEWRTPGKKTITKVG 173
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G Q SRFLAV
Sbjct: 174 SNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGRQRSRFLAV 231
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGNL 239
G DNT+R++S+ P DCL+ ++Q + ESL+ +E+ AS +D PA NL
Sbjct: 232 GSFDNTIRILSVDPDDCLQPLSVQSVSSAPESLMFLEVQASVGGEDGADHPA------NL 285
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 286 FLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 324
>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1227
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 157/279 (56%), Gaps = 51/279 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYIVVSF+N TLVLSIGET+EEVS S F TT +L S +G++S++QV+P+GIRHI
Sbjct: 479 FDAYIVVSFANVTLVLSIGETIEEVSDSHFLDTTHSLAVSLLGEDSLMQVHPNGIRHI-- 536
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ GR V++ + KK I +
Sbjct: 537 -------------------------------REDGR--------VNEWRTPGKKTITKVG 557
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G Q SRFLAV
Sbjct: 558 SNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGRQRSRFLAV 615
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGNL 239
G DNT+R++S P DCL+ ++Q + ESL+ +E+ AS +D PA NL
Sbjct: 616 GSYDNTIRILSFDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPA------NL 669
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 670 FLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 708
>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
Length = 1229
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 158/279 (56%), Gaps = 51/279 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYIVVSF+N TLVLSIGET+EEVS S F TT +L + +G++S++QV+P+GIRHI
Sbjct: 480 FDAYIVVSFTNVTLVLSIGETIEEVSDSQFLDTTHSLAVTLLGEDSLMQVHPNGIRHI-- 537
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ GR V++ + KK I +
Sbjct: 538 -------------------------------REDGR--------VNEWRTPGKKTITKVG 558
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G Q SRFLAV
Sbjct: 559 SNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGRQRSRFLAV 616
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGNL 239
G DNT+R++SL P DCL+ ++Q + ESL+ +E+ AS +D PA NL
Sbjct: 617 GSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPA------NL 670
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 671 FLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 709
>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
Length = 1232
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 158/279 (56%), Gaps = 51/279 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYIVVSF+N TLVLSIGET+EEVS S F TT +L + +G++S++QV+P+GIRHI
Sbjct: 482 FDAYIVVSFTNVTLVLSIGETIEEVSDSQFLDTTHSLAVTLLGEDSLMQVHPNGIRHI-- 539
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ GR V++ + KK I +
Sbjct: 540 -------------------------------REDGR--------VNEWRTPGKKTITKVG 560
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G Q SRFLAV
Sbjct: 561 SNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGRQRSRFLAV 618
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGNL 239
G DNT+R++SL P DCL+ ++Q + ESL+ +E+ AS +D PA NL
Sbjct: 619 GSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASIGGEDGADYPA------NL 672
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 673 FLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 711
>gi|156051126|ref|XP_001591524.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980]
gi|154704748|gb|EDO04487.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1147
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 159/286 (55%), Gaps = 52/286 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+DAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI A
Sbjct: 489 YDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIRA 548
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
D++ V++ + IV
Sbjct: 549 -------------DRR----------------------------VNEWAAPQHRSIVAAT 567
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G Q S+FLAV
Sbjct: 568 TNERQVAVALSSGEIVYFEMDSD-GSLAEYDEKKEMSGTVTCLSLGEVPEGRQRSQFLAV 626
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D+TVR++SL P L+ K++Q L +L ++ M SD +G TL YL
Sbjct: 627 GCDDSTVRILSLDPDSTLENKSVQALTSPPNALSIMAM-------SDSSSGGSTL---YL 676
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ QG A
Sbjct: 677 HIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPVKLFRVSVQGQTA 722
>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1213
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 155/287 (54%), Gaps = 58/287 (20%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF NATLVLSIGETVEEVS SGF GTTPTL S +GD+S++Q +P G+RH+
Sbjct: 470 EFDAYIVVSFVNATLVLSIGETVEEVSDSGFLGTTPTLSASLLGDDSLLQAHPGGLRHVR 529
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A ++++ + +K I R A N RQ+VIAL GG +IYFE+
Sbjct: 530 ADK---RINEWRCPGRKTITRVACNNRQVVIALSGGEIIYFELD---------------- 570
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
TG L E E ++ +V C+ + P G +RFLA
Sbjct: 571 -----------------------STGQLMEI-EKLETNGDVACLHVGPVPEGSLRNRFLA 606
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL+ DCL+ +Q L SL+M++ G LY
Sbjct: 607 VGSFDSTVRVLSLSADDCLQTMGVQALAAAPCSLLMLQ---------------TREGGLY 651
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L VGL NG LLR VD+ +G LSD R R+LG+RP KL +G A
Sbjct: 652 LNVGLANGVLLRAEVDRVTGQLSDTRARFLGARPPKLHGATVRGQPA 698
>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
181]
Length = 1209
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 160/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSM-------ADSSSGGTT---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG++ VKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKQVKLFRVSVKGQTA 719
>gi|242772631|ref|XP_002478075.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
gi|218721694|gb|EED21112.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
Length = 1209
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 156/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIV+SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIVLSFTNGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPKGIRHIL 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A H V++ + IV
Sbjct: 545 AD-----------------------------------------HRVNEWPAPQHRTIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V ++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTSLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSM-------ADSTSGGSTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG++PVKLF + +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSVKGQSA 719
>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
Length = 1232
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 154/287 (53%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D Y+V+SF + TLVL IGETVEEV SGF PTL S +GD+S++QVYP GIRHI
Sbjct: 475 ESDTYLVLSFVDKTLVLGIGETVEEVKDSGFLEEVPTLSASRIGDDSLLQVYPGGIRHI- 533
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QR V + K I C
Sbjct: 534 ----------------------RFDQR------------------VKEWKAPGSTAITNC 553
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN+RQ+VI L L+YFE+ G L+E +E I+M S+V MAL+ S+FLA
Sbjct: 554 AVNERQVVITLSSNELVYFELD-RAGQLNEYTERIEMTSKVTAMALAPVAEDAFTSQFLA 612
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+GL DNTVR++SL P CL+ +Q LP SL +IE+ + EP G L
Sbjct: 613 LGLEDNTVRVLSLDPSSCLQPLRMQALPGAPSSLCIIEIAG----QAGEP------GTLQ 662
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL NG + R +D+ +GDLSD+R RYLG R V+LF +R G+ A
Sbjct: 663 LHIGLANGVVSRSTMDKVTGDLSDSRTRYLGVREVRLFPVRAHGHPA 709
>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 158/291 (54%), Gaps = 55/291 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI- 59
EFDAYIVVSF+NATLVLSIGET +EVS SGF T P+L S +GD+S++QV+P+GIRHI
Sbjct: 478 EFDAYIVVSFTNATLVLSIGETADEVSDSGFLDTAPSLAVSLIGDDSLMQVHPNGIRHIR 537
Query: 60 -GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ W+ S K+ I
Sbjct: 538 EDGRTNEWQTSGKR-------------------------------------------TIA 554
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ N+ Q+VIAL GG LIYFE+ TG L E E +M +V C+ ++ P G SRF
Sbjct: 555 KVGSNRLQVVIALNGGELIYFEVDV-TGQLMEV-ERHEMSGDVACLDIAPVPKGRLRSRF 612
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTL 236
LAVG D T+R++SL P DC++ +Q L ESL+ +E+ AS +D PA
Sbjct: 613 LAVGSYDKTIRILSLDPDDCMQTLGIQSLSSAPESLLFLEVQASVGGEDGADHPA----- 667
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+L+L GLQNG L R VVD +G LSD R R+LG + KLF I +G A
Sbjct: 668 -SLFLNAGLQNGVLSRTVVDMVTGLLSDTRSRFLGLKAPKLFPIIVRGKRA 717
>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 1225
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 158/284 (55%), Gaps = 55/284 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI- 59
EFD+YIVVSF+NATLVLSIGETVEEVS SGF T P+L S +GD+SI+QV+P+GIRHI
Sbjct: 478 EFDSYIVVSFTNATLVLSIGETVEEVSNSGFLDTAPSLAVSLIGDDSIMQVHPNGIRHIR 537
Query: 60 -GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ W+ S K+ I
Sbjct: 538 EDGRTNEWQTSGKR-------------------------------------------TIA 554
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ N+ Q+VIAL GG L+YFE+ TG L E E +M +V C+ ++ P G SRF
Sbjct: 555 KVGSNRLQVVIALNGGELVYFEVDV-TGQLMEV-EKHEMSGDVACLDIAPVPKGRLRSRF 612
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTL 236
LAVG DNT+R++SL P DC++ ++Q L ESL+ +E+ AS +D PA
Sbjct: 613 LAVGSYDNTIRILSLDPDDCMQTLSIQSLSSAPESLLFLEVQASVGGEDGADHPA----- 667
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
+L+L GLQ+G L R VVD +G LSD R R+LG + KLF I
Sbjct: 668 -SLFLSAGLQSGVLSRTVVDTVTGLLSDARSRFLGLKAPKLFPI 710
>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1209
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 160/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++Q++P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDSD-GSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LGS+ VKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKAVKLFQVSVKGQTA 719
>gi|212531303|ref|XP_002145808.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
gi|210071172|gb|EEA25261.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
Length = 1209
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIV+SF+N TLVLSIGETVEEV+ +GF T PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIVLSFTNGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPKGIRHIL 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A H V++ + IV
Sbjct: 545 AD-----------------------------------------HRVNEWPAPQHRTIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V ++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTSLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMSM-------IDSTSGGSTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG++PVKLF + +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSVKGQPA 719
>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
Length = 1217
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 159/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +G++S+VQ++P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLVQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
V++R V++ + IV
Sbjct: 544 ----------------------MVDRR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V ++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTSLSLGEVPEGRIRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LGS+PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTA 719
>gi|414882040|tpg|DAA59171.1| TPA: hypothetical protein ZEAMMB73_269016 [Zea mays]
Length = 690
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 156/279 (55%), Gaps = 51/279 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FDAYIVVSF+N TLVLSIGET+EEVS S F TT +L + +G++S++QV+P+GIRHI
Sbjct: 331 FDAYIVVSFTNVTLVLSIGETIEEVSDSQFLDTTHSLAVTLLGEDSLMQVHPNGIRHIR- 389
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ GR V++ + KK I +
Sbjct: 390 --------------------------------EDGR--------VNEWRTPGKKTITKVG 409
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G Q SRFL V
Sbjct: 410 SNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGRQRSRFLVV 467
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGNL 239
G DNT+ ++SL P DCL+ ++Q + ESL+ +E+ AS +D PA NL
Sbjct: 468 GSYDNTIGILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPA------NL 521
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 522 FLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 560
>gi|261196131|ref|XP_002624469.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
gi|239587602|gb|EEQ70245.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
gi|239614558|gb|EEQ91545.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis ER-3]
gi|327356791|gb|EGE85648.1| pre-mRNA-splicing factor rse1 [Ajellomyces dermatitidis ATCC 18188]
Length = 1209
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 158/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 564 TTNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEVPKGRARSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M SD +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAM-------SDSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ + +A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKA 719
>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
Length = 1202
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 157/284 (55%), Gaps = 49/284 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIV+SF+N TLVLSIGETVEEV+ +GF + PTL +G+++++QV+P GIRHI
Sbjct: 479 EFDAYIVLSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDALLQVHPKGIRHIR 538
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 539 A-------------DRR----------------------------VNEWPAPQHRSIVAA 557
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 558 STNSRQVAVALSSGEIVYFEMDSD-GQLAEYEEKKEMSGTVTCLSLGEVPEGRVRSSFLA 616
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P L+ K++Q L SL ++ M P S+ E + +TL Y
Sbjct: 617 VGCDDATVRILSLDPDSTLESKSVQALTSAPSSLCIMSM----PDSASETSRSLTL---Y 669
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D +G+L+D R R+LG +PVK+FK+ QG
Sbjct: 670 LHIGLYSGVYLRTVLDTVTGELTDTRTRFLGPKPVKIFKVIAQG 713
>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
[Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
nidulans FGSC A4]
Length = 1209
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 158/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIV+SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++Q++P GIRHI
Sbjct: 485 EFDAYIVLSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFE+ + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFELDAD-GSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L +I M +D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDTTLENKSVQALTAAPSALNIIAM-------ADSSSGGTT---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR +D+ +G+LSD R R+LGS+ VKLF++ G A
Sbjct: 673 LHIGLHSGVYLRTALDEVTGELSDTRTRFLGSKAVKLFQVSVTGQTA 719
>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
Length = 1226
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 158/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIV+SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++Q++P GIRHI
Sbjct: 485 EFDAYIVLSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------LADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFE+ + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFELDAD-GSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L +I M +D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDTTLENKSVQALTAAPSALNIIAM-------ADSSSGGTT---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR +D+ +G+LSD R R+LGS+ VKLF++ G A
Sbjct: 673 LHIGLHSGVYLRTALDEVTGELSDTRTRFLGSKAVKLFQVSVTGQTA 719
>gi|302504587|ref|XP_003014252.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
gi|291177820|gb|EFE33612.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
Length = 762
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FDAYIV+SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QFDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 545 A-----------------------DQR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM-------IDSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 719
>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1236
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 52/286 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+DAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +GD+ ++QV+P GIRHI A
Sbjct: 489 YDAYIILSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGDDGLIQVHPKGIRHIRA 548
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+++ A Q + IV A
Sbjct: 549 D--------------RRVNEWAAPQH---------------------------RSIVAAA 567
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N RQ+ +AL G ++YFEM + G L E E +M V C++L P G S+FLAV
Sbjct: 568 TNARQVAVALSSGEIVYFEMDSD-GSLAEYDEKKEMSGTVTCLSLGEVPEGRVRSQFLAV 626
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D+TVR++SL P L+ K++Q L +L ++ M SD +G T LYL
Sbjct: 627 GCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAM-------SDSSSGGST---LYL 676
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++GL +G LR V+D+ +G+LSD R R+LG +P +LF++ QG A
Sbjct: 677 HIGLYSGVYLRTVLDEVTGELSDTRTRFLGPKPARLFRVSVQGQAA 722
>gi|154277742|ref|XP_001539706.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
gi|150413291|gb|EDN08674.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
Length = 1233
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 156/283 (55%), Gaps = 52/283 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E M V C++L P G S FLA
Sbjct: 564 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRAMSGTVTCLSLGEVPRGRARSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L +L ++ M SD +G T LY
Sbjct: 623 VGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAM-------SDSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ +
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVK 715
>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
Length = 1241
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 159/292 (54%), Gaps = 70/292 (23%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIVVSF NATLVLSIGETVEEV+ S G VQ+YP+GIRHI
Sbjct: 504 EYDAYIVVSFVNATLVLSIGETVEEVTDSVVLGVVD------------VQIYPEGIRHI- 550
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
RC ++R V++ K ++ I C
Sbjct: 551 --------------------RC--DRR------------------VNEWKVPGRRVITNC 570
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
AVN RQ++IAL GG ++YFE+ E G L+E +E +M +V+ MAL++ P GE RFLA
Sbjct: 571 AVNCRQVLIALNGGEIVYFELD-EGGQLNEYTERKEMPCDVVAMALADIPPGEIRCRFLA 629
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
V L D TVR+ISL P DCL N+Q LP +A+SL + +G S+ L+
Sbjct: 630 VALTDRTVRVISLDPSDCLTPLNMQSLPAMAQSLCIAAVGGDTMEST-----------LF 678
Query: 241 LYVGLQ-----NGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL+ NG LLR V+D +G+L D R RYLG +PVKLFK++ N A
Sbjct: 679 LNIGLEVNKFTNGVLLRTVLDSVTGELQDTRTRYLGMKPVKLFKVKMHDNIA 730
>gi|296814646|ref|XP_002847660.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
gi|238840685|gb|EEQ30347.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
Length = 1235
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 157/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QYDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 545 A-----------------------DQR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L +L ++ M D TS GP LY
Sbjct: 623 VGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMSM--IDSTS----GGP----TLY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFGVSVKEQRA 719
>gi|302654421|ref|XP_003019018.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
gi|291182708|gb|EFE38373.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
Length = 802
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FDAYIV+SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QFDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 545 A-----------------------DQR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTCLSLGEVPEGRGRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM-------IDSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 719
>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus
NRRL3357]
gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus
NRRL3357]
Length = 1210
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 158/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++Q++P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------MADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M S + LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSSGGT----------TLY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LGS+PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTA 719
>gi|225560964|gb|EEH09245.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus G186AR]
Length = 1209
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 156/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E M V C++L P G S FLA
Sbjct: 564 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRAMSGTVTCLSLGEVPRGRARSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L +L ++ M SD TS LY
Sbjct: 623 VGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAM--SDSTSGG--------STLY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQTA 719
>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
Length = 1034
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 158/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++Q++P GIRHI
Sbjct: 310 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHI- 368
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 369 -------MADRR---------------------------------VNEWPAPQHRSIVAA 388
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 389 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 447
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M S + LY
Sbjct: 448 VGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSSGGT----------TLY 497
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LGS+PVKLF++ +G A
Sbjct: 498 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTA 544
>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
Length = 1144
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 158/278 (56%), Gaps = 46/278 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSFSNATLVLSIGETVEEV+ SGF G PTL + D+S++QVYP+G+RHI
Sbjct: 443 EFDAYIVVSFSNATLVLSIGETVEEVNDSGFNGNVPTLQTQLLADDSMLQVYPNGLRHI- 501
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
D++ +++ + +K IV+
Sbjct: 502 ------------RPDRR----------------------------INEWRAPGRKTIVKA 521
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL GG +IYFE++P+ G+L E SE +M +V C+ ++ P G FLA
Sbjct: 522 TTNERQVAIALGGGEVIYFELNPQ-GMLVE-SEKREMGGDVACLDVAPVPEGRTRCAFLA 579
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG+ D R++SL P LK + Q + ES+++++ ++E AG G L+
Sbjct: 580 VGMYDGAARVLSLQPDSTLKVLSTQAVGATPESVLLLDSPLMGKDGTEEGAGS---GALF 636
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
L VGL NG LLR VD+ +G LSD R R+LG++P KLF
Sbjct: 637 LQVGLVNGVLLRTEVDRVTGQLSDTRTRFLGTKPPKLF 674
>gi|325096432|gb|EGC49742.1| pre-mRNA-splicing factor Rse1 [Ajellomyces capsulatus H88]
Length = 1209
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 157/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E M V C++L P G S FLA
Sbjct: 564 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRAMSGTVTCLSLGEVPRGRARSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L +L ++ M SD +G T LY
Sbjct: 623 VGCDDSTVRILSLDPESTLENKSVQALTSAPSALSIMAM-------SDSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQTA 719
>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
Length = 1209
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 154/287 (53%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FDAYIV+SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QFDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 545 A-----------------------DQR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D TS LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM--IDSTSGG--------STLY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 719
>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1270
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 158/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++Q++P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------MADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M S + LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSSGGT----------ALY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LGS+PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTA 719
>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
Length = 1209
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 158/287 (55%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++Q++P GIRHI
Sbjct: 485 EFDAYIILSFANGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHI- 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++D++ V++ + IV
Sbjct: 544 -------MADRR---------------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M S + LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSSGGT----------ALY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LGS+PVKLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTA 719
>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
Length = 1209
Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FDAYIV+SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QFDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 545 A-----------------------DQR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 564 TSNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM-------IDSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 719
>gi|295666353|ref|XP_002793727.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278021|gb|EEH33587.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1209
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 157/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 564 TTNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEVPKGRARSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L K++Q L +L ++ M +D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLGNKSVQALTSAPSALSIMAM-------ADSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ + +A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKA 719
>gi|226293297|gb|EEH48717.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb18]
Length = 1208
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 157/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 564 TTNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEVPKGRARSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L K++Q L +L ++ M +D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLGNKSVQALTSAPSALSIMAM-------ADSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ + +A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKA 719
>gi|225683909|gb|EEH22193.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb03]
Length = 1209
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 157/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 EFDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 564 TTNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEVPKGRARSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L K++Q L +L ++ M +D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLGNKSVQALTSAPSALSIMAM-------ADSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF++ + +A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKA 719
>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
Length = 1197
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 154/287 (53%), Gaps = 50/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ AYIVVSF+NATLVLSIGETVEEV+ +GF PTL +G++++VQV+P GIRHI
Sbjct: 461 QYHAYIVVSFANATLVLSIGETVEEVTDTGFLTNAPTLAVQQIGEDALVQVHPHGIRHIR 520
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + + IV
Sbjct: 521 A-------------DRR----------------------------VNEWRAPQGQTIVEA 539
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N RQI IAL G ++YFEM G L+E E QM + + +AL P G +R++A
Sbjct: 540 ATNSRQIAIALSNGEIVYFEMD-NMGQLNEHQEHRQMSAYITTLALGEVPEGRVRARYIA 598
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P CL+ ++Q L + SL +IEM + G Y
Sbjct: 599 VGCEDQTVRILSLDPDSCLEPISMQALQGVPSSLCIIEMMDTGIEQGH--------GTQY 650
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LR ++D +G LSD R R++G++ VKLF+I QG+ A
Sbjct: 651 LNIGLSNGIFLRTILDTITGQLSDTRARFIGAKSVKLFRISIQGHPA 697
>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1197
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 156/283 (55%), Gaps = 54/283 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF N TLVLSIGETVEEVS +GF ++PTL +GD++++QV+P GIRHI
Sbjct: 480 QYDAYIVLSFVNGTLVLSIGETVEEVSDTGFLSSSPTLAVQQLGDDALIQVHPKGIRHI- 538
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++DK+ V++ K + IV+
Sbjct: 539 ------------QADKR----------------------------VNEWKTPQHRSIVQV 558
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
NQRQ+V+AL G ++YFE+ E G L+E + QM V +++ + P G Q FLA
Sbjct: 559 TTNQRQVVVALSNGEIVYFELDDE-GNLNEYQDRKQMTGSVTSLSIGHVPEGRQRHPFLA 617
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR+ISL P++ L+ ++Q L SL ++ M + + Y
Sbjct: 618 VGCDDSTVRIISLEPENTLESLSVQALTAPPNSLCIMSMKDGN------------IETFY 665
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL NG LR V++ ++G L D R R+LGSRPVKLF + Q
Sbjct: 666 LHIGLFNGVYLRSVLELSTGQLKDTRTRFLGSRPVKLFSVTIQ 708
>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
Length = 1210
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 156/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI++SF TLVLSIGETVEEV+ +GF T PTL +G++++VQV+P GIRHI
Sbjct: 485 QYDAYIILSFRTGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDALVQVHPKGIRHIR 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ + IV
Sbjct: 545 A-------------DKR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ +AL G ++YFEM + G L E E +M V C++L + P G S FLA
Sbjct: 564 TTNERQVAVALSSGEIVYFEMDTD-GSLAEYDERREMTGTVTCLSLGDVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G T+ Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAM-------ADSTSGGTTM---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG RP KLF++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPAKLFRVSVKGQNA 719
>gi|358253751|dbj|GAA53701.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
Length = 726
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 124/195 (63%), Gaps = 42/195 (21%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL CS +GD+++VQVYPDGIRHI
Sbjct: 472 EYDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHIR 531
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +V+ + KK IVRCAVN+RQ+VIAL GG L+YFEM
Sbjct: 532 ADK---RVNVWRAPGKKMIVRCAVNRRQVVIALTGGELVYFEMD---------------- 572
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
TG L+E +E +M ++V+CMAL P+ EQ SRFLA
Sbjct: 573 -----------------------MTGQLNEYTERKEMPADVICMALGRIPTSEQRSRFLA 609
Query: 181 VGLADNTVRLISLAP 195
VGLADNTVR++SL P
Sbjct: 610 VGLADNTVRILSLDP 624
>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 914
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 156/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI++SF TLVLSIGETVEEV+ +GF T PTL +G++++VQV+P GIRHI
Sbjct: 189 QYDAYIILSFRTGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDALVQVHPKGIRHIR 248
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ V++ + IV
Sbjct: 249 A-------------DKR----------------------------VNEWPAPQHRSIVAA 267
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ +AL G ++YFEM + G L E E +M V C++L + P G S FLA
Sbjct: 268 TTNERQVAVALSSGEIVYFEMDTD-GSLAEYDERREMTGTVTCLSLGDVPEGRVRSSFLA 326
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G T+ Y
Sbjct: 327 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAM-------ADSTSGGTTM---Y 376
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG RP KLF++ +G A
Sbjct: 377 LHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPAKLFRVSVKGQNA 423
>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
Length = 1209
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 156/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEVPPGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM-------VDSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRA 719
>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
Length = 967
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 152/286 (53%), Gaps = 52/286 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+DAYI++SFSN TLVLSIGETVEEV+ +GF T TL +G++ ++QV+P GIRHI A
Sbjct: 300 YDAYIILSFSNGTLVLSIGETVEEVTDTGFLSTASTLAVQQLGEDGLIQVHPKGIRHIRA 359
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+++ A Q + IV
Sbjct: 360 D--------------RRVNEWAAPQH---------------------------RSIVAAT 378
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+ +AL G ++YFEM + G L E E +M V C++L + P G S +LAV
Sbjct: 379 TNERQVAVALSSGEIVYFEMDSD-GSLAEYDEKKEMSGTVTCLSLGDVPEGRVRSPYLAV 437
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D+TVR++SL P L+ K++Q L +L ++ M S S LYL
Sbjct: 438 GCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSSSGGS----------TLYL 487
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++GL +G LR V+D+ +G+L+D R+R+LG +P KLFK+ QG A
Sbjct: 488 HIGLYSGVYLRTVLDEVTGELTDTRLRFLGPKPAKLFKVSVQGQTA 533
>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
Length = 1208
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEVPPGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D TS LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM--VDSTSGG--------STLY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRA 719
>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
phaseolina MS6]
Length = 1210
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 154/287 (53%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI++SFSN TLVLSIGETVEEV+ +GF +T TL +G+++++QV+P GIRHI
Sbjct: 485 EYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSTRTLAVQLLGEDALIQVHPKGIRHIQ 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A GGR +++ + IV
Sbjct: 545 A---------------------------------GGR--------INEWPAPQHRTIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 564 TTNERQVAVALSSGEIVYFEMDVD-GSLAEYDEKKEMSGTVTCLSLGEVPEGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M S S LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSSSGGS----------TLY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+L+D R R+LG++ VKLF++ Q A
Sbjct: 673 LHIGLYSGVYLRTVIDEITGELTDTRTRFLGAKGVKLFRVTVQDQSA 719
>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
Length = 1212
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 161/286 (56%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+DAYI++SF N TLVL+IG+T+EEVS +GF + PTL +GD++++Q+YP GIRHI
Sbjct: 486 YDAYIILSFVNGTLVLAIGDTIEEVSDTGFISSAPTLGVQQLGDDALLQIYPRGIRHI-- 543
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++DK+ V++ K ++ IV
Sbjct: 544 ------LADKR---------------------------------VNEWKVGARETIVCAT 564
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N RQ+VI L G L+YFE+ + G L+E E M +E+L ++++ P G Q + +LAV
Sbjct: 565 TNSRQVVIGLSTGELVYFELDMD-GQLNEFQERKPMGAEILALSIAEVPEGRQRTPYLAV 623
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G AD+TVR+ISL P++ L +LQ L S+VM E+ +D + A +++
Sbjct: 624 GCADSTVRIISLDPENTLDSLSLQALTAPPSSIVMAEI--TDASIDKYHA------TMFV 675
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GL NG LLR V+D +G L D R R+LGSRPVKL ++ QG+ A
Sbjct: 676 NIGLNNGVLLRTVLDPLTGSLGDTRTRFLGSRPVKLARVPVQGSPA 721
>gi|171685748|ref|XP_001907815.1| hypothetical protein [Podospora anserina S mat+]
gi|170942835|emb|CAP68488.1| unnamed protein product [Podospora anserina S mat+]
Length = 1235
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 154/284 (54%), Gaps = 54/284 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIV+SF+NATLVLSIGETVEEVS SGF T PTL +G+ ++QV+P GIRHI
Sbjct: 491 EYDAYIVLSFTNATLVLSIGETVEEVSDSGFLTTVPTLAVQQLGEEGLIQVHPKGIRHI- 549
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QG V++ + IV
Sbjct: 550 --------------------------------VQGR---------VNEWPAPQHRSIVAA 568
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+ Q+VIAL G ++YFEM + G L E E +M V ++L P G + S FLA
Sbjct: 569 ATNENQVVIALSSGEIVYFEMDAD-GSLAEYDEKKEMSGTVTSLSLGRVPEGLRRSSFLA 627
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL ++ M ++ G TL Y
Sbjct: 628 VGCDDCTVRILSLDPESTLEMKSIQALTAAPASLSIMSM--------EDSFGGTTL---Y 676
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG +P KLF++ QG
Sbjct: 677 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQG 720
>gi|340959394|gb|EGS20575.1| putative pre-mRNA splicing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 153/283 (54%), Gaps = 54/283 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIV+SF+NATLVLSIGETVEEVS SGF T PTL MG+ ++Q++P GIRHI
Sbjct: 489 EYDAYIVLSFTNATLVLSIGETVEEVSDSGFLTTVPTLAVQQMGEEGLIQIHPKGIRHI- 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QG V++ + IV
Sbjct: 548 --------------------------------VQGR---------VNEWPAPQHRSIVAA 566
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL G ++YFEM + G L E E QM V ++L P G + S FLA
Sbjct: 567 TTNENQVVIALSSGEIVYFEMDAD-GSLAEYDEKKQMSGTVTSLSLGKVPEGLRRSSFLA 625
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL+++ M ++ G T LY
Sbjct: 626 VGCDDCTVRILSLDPESTLEMKSIQALTAAPSSLLIMSM--------EDSTGGTT---LY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R ++LG +P KLF++ Q
Sbjct: 675 LHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPTKLFQVTVQ 717
>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii
str. Neff]
Length = 1227
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 157/282 (55%), Gaps = 54/282 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YI+VSF NATLVLSIG+ VEEV +GF TL +GD+S+VQV+P GIR I
Sbjct: 462 EYDSYIIVSFLNATLVLSIGDNVEEVKDAGFNENASTLNVGLVGDDSLVQVFPTGIRFI- 520
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
SDK+ +++ ++ IVR
Sbjct: 521 ------------RSDKR----------------------------ITEWPTPARRTIVRS 540
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A+N +Q+VIAL GG L+YFE+ TG L E M ++ C+ ++ P G +RFLA
Sbjct: 541 AINNKQVVIALTGGELLYFELDI-TGSLVEVGRK-DMGRDIACIDIAPIPEGRLRARFLA 598
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEM-GASDPTSSDEPAGPVTLGNL 239
VG +NTVR++SL P+D +Q LP ESL +++M G +D ++ G L
Sbjct: 599 VGDYENTVRVLSLDPEDVFSSLAVQALPAPPESLCIVKMKGGTDSSA----------GTL 648
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+L +GL NG L R V+D+ +G+LSD R R+LGSRPV+L K+R
Sbjct: 649 FLNIGLTNGVLQRTVLDKVTGELSDTRTRFLGSRPVRLLKLR 690
>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
Length = 1212
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 153/287 (53%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYI+++FSN TLVLSIGETVEEV+ +GF + TL +G++ ++QV+P GIRHI
Sbjct: 488 EYDAYIILAFSNGTLVLSIGETVEEVTDTGFLSSATTLAVQQLGEDGLIQVHPKGIRHIR 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +++ A Q + IV
Sbjct: 548 AD--------------RRVNEWAAPQH---------------------------RSIVAA 566
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N +Q+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 567 TTNAQQVAVALSSGEIVYFEMDSD-GSLAEYDEKREMSGTVTCLSLGEVPEGRVRSNFLA 625
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L SL ++ M +D +G TL Y
Sbjct: 626 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSSLSIMAM-------TDSSSGGSTL---Y 675
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +P KLF++ QG A
Sbjct: 676 LHIGLYSGVYLRTVLDEITGELSDTRTRFLGPKPAKLFRVSVQGQTA 722
>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
Length = 1212
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 151/284 (53%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +G++ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
Q Q V++ + IV
Sbjct: 547 ------------------------RQGQ-----------------VNEWAAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 566 TTNEHQVAVALSSGEIVYFEMDGD-GSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L SL +I M S S LY
Sbjct: 625 VGCDDSTVRVLSLDPESTLESKSVQALTAPPSSLAIIAMDDSSSGGS----------TLY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG +PV+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVRLFQVTVQG 718
>gi|425768510|gb|EKV07031.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum PHI26]
gi|425775700|gb|EKV13954.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum Pd1]
Length = 1209
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EF YI++SF+N TLVLSIGE VEEVS +GF + PTL +G++S+VQV+P GIRHI
Sbjct: 485 EFHTYIILSFANGTLVLSIGEIVEEVSDTGFLSSAPTLAVQQLGEDSLVQVHPRGIRHIL 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 545 A-----------------------DQR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V +++ P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTSLSMGEVPEGRMRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALQIMAM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R++G++PVKL ++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAKPVKLSQVSVKGQTA 719
>gi|255946770|ref|XP_002564152.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591169|emb|CAP97395.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1209
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EF YI++SF+N TLVLSIGE VEEVS +GF + PTL +G++S+VQV+P GIRHI
Sbjct: 485 EFHTYIILSFANGTLVLSIGEIVEEVSDTGFLSSAPTLAVQQLGEDSLVQVHPRGIRHIL 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 545 A-----------------------DQR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E QM V +++ P G S FLA
Sbjct: 564 AANERQVAVALSSGEIVYFEMDAD-GTLAEYDERRQMSGTVTSLSMGEVPEGRMRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M +D +G TL Y
Sbjct: 623 VGCDDSTVRILSLNPDSTLENKSVQALTSAPSALQIMAM-------ADSSSGGTTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R++G++PVKL ++ +G A
Sbjct: 673 LHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAKPVKLSQVSVKGQTA 719
>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 1209
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEVPPGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D +G T LY
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM-------VDSTSGGST---LY 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG + VKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQRA 719
>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
Length = 1212
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 150/284 (52%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +G++ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHIR 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ V++ + IV
Sbjct: 548 HGH------------------------------------------VNEWAAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 566 TTNEHQVAVALSSGEIVYFEMDGD-GSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L SL +I M S S LY
Sbjct: 625 VGCDDSTVRVLSLDPESTLESKSVQALTAPPSSLAIIAMDDSSSGGS----------TLY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG +PV+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPVRLFQVTVQG 718
>gi|302406266|ref|XP_003000969.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
gi|261360227|gb|EEY22655.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
Length = 1059
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 153/284 (53%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+NATLVLSIGETVEEV+ SGF + PTL +G ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNATLVLSIGETVEEVNDSGFLTSVPTLAAQLLGGEGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G+ V++ + IV
Sbjct: 547 ---------------------------------RNGQ--------VNEWAAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 566 TTNEHQVAVALSSGEIVYFEMDSD-GSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L SL +I M D +G TL Y
Sbjct: 625 VGCDDSTVRVLSLDPETTLESKSVQALTAPPTSLAVIAM-------EDSSSGGSTL---Y 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG +PVKLF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVKLFQVTVQG 718
>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
24927]
Length = 1308
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 49/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIV+SF+N TLVLSIGETVEEV+ +GF + PTL +G++ ++QV+P GIRHI
Sbjct: 585 EYDAYIVLSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDGLLQVHPKGIRHIR 644
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 645 A-------------DRR----------------------------VNEWPAPQHRSIVAA 663
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N RQ+ IAL G ++YFE+ + G L E + +M V C++L + P G+ S FLA
Sbjct: 664 STNSRQVAIALSSGEIVYFELDSD-GQLAEYEDKKEMSGTVTCLSLGDVPEGKMRSSFLA 722
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D G L+
Sbjct: 723 VGCDDSTVRILSLDPDSTLESKSVQALTSAPTALRIMSM-------PDSAGGDSQRSTLF 775
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D +G+L+D R R+LG +PVKLF + G A
Sbjct: 776 LHIGLYSGVYLRTVLDTITGELTDTRTRFLGPQPVKLFSVSAAGTTA 822
>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
Length = 1230
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 153/284 (53%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+NATLVLSIGETVEEV+ SGF + PTL +G ++QV+P GIRHI
Sbjct: 506 QYDAYIVLSFTNATLVLSIGETVEEVNDSGFLTSVPTLAAQLLGGEGLIQVHPKGIRHI- 564
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G+ V++ + IV
Sbjct: 565 ---------------------------------RNGQ--------VNEWAAPQHRSIVAA 583
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 584 TTNEHQVAVALSSGEIVYFEMDSD-GSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLA 642
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L SL +I M D +G TL Y
Sbjct: 643 VGCDDSTVRVLSLDPETTLESKSVQALTAPPTSLAVIAM-------EDSSSGGSTL---Y 692
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG +PVKLF++ QG
Sbjct: 693 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVKLFQVTVQG 736
>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str.
Silveira]
Length = 970
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI++SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 246 QYDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 305
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 306 A-------------DRR----------------------------VNEWPAPQHRSIVAA 324
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 325 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEIPPGRVRSSFLA 383
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D +G T LY
Sbjct: 384 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM-------VDSTSGGST---LY 433
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG + VKLF + + A
Sbjct: 434 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQRA 480
>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1212
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 152/284 (53%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +G++ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+I A Q + IV
Sbjct: 547 --------------RHGQINEWAAPQH---------------------------RSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+ +AL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 566 TTNEHQVAVALSSGEIVYFEMDGD-GSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L SL +I M D +SS A LY
Sbjct: 625 VGCDDSTVRVLSLDPDSTLESKSVQALTAPPSSLAIIAM---DDSSSGGSA-------LY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG +PV+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPVRLFQVTVQG 718
>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
Length = 1212
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 150/284 (52%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +GD+ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHIR 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N V++ + IV
Sbjct: 548 NGN------------------------------------------VNEWAAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+ +AL G ++YFEM + G L E E +M V C++L + P G S FLA
Sbjct: 566 TANAHQVAVALSSGEIVYFEMDAD-GSLAEYDEKKEMFGTVTCLSLGDVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M D +G T LY
Sbjct: 625 VGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAIIAM-------EDSSSGGST---LY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQG 718
>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
Length = 1208
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 150/284 (52%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +GD+ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHIR 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N V++ + IV
Sbjct: 548 NGN------------------------------------------VNEWAAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+ +AL G ++YFEM + G L E E +M V C++L + P G S FLA
Sbjct: 566 TANAHQVAVALSSGEIVYFEMDAD-GSLAEYDEKKEMFGTVTCLSLGDVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M D +G T LY
Sbjct: 625 VGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAIIAM-------EDSSSGGST---LY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEVRLFQVTVQG 718
>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
Length = 1212
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 150/285 (52%), Gaps = 53/285 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +GD+ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFSTSVPTLAAQLLGDDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G+ V++ + IV
Sbjct: 547 ---------------------------------RNGK--------VNEWDAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N Q+ IAL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 566 STNAHQVAIALSSGEIVYFEMDSD-GSLAEYDEKKEMFGTVTCLSLGEVPEGRVRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M S S LY
Sbjct: 625 VGCDDCTVRILSLDPESTLESKSVQALTAAPSSLAIIAMDDSSSGGS----------TLY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGT 719
>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
Length = 1221
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 150/285 (52%), Gaps = 53/285 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +GD+ ++QV+P GIRH+
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFSTSVPTLAAQLLGDDGLIQVHPKGIRHV- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G+ V++ + IV
Sbjct: 547 ---------------------------------RNGK--------VNEWDAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N Q+ IAL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 566 STNAHQVAIALSSGEIVYFEMDSD-GSLAEYDEKKEMFGTVTCLSLGEVPEGRARSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M S S LY
Sbjct: 625 VGCDDCTVRILSLDPESTLESKSVQALTAAPSSLAIIAMDDSSSGGS----------TLY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGT 719
>gi|258570355|ref|XP_002543981.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
gi|237904251|gb|EEP78652.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
Length = 1209
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 155/287 (54%), Gaps = 52/287 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI++SF+N TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QYDAYIILSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A D++ V++ + IV
Sbjct: 545 A-------------DRR----------------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V C++L G S FLA
Sbjct: 564 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKREMSGTVTCLSLGEILPGRVRSSFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D +G TL Y
Sbjct: 623 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM-------IDSTSGGSTL---Y 672
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 673 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRA 719
>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1211
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 154/283 (54%), Gaps = 54/283 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D YIV+SF+NATLVLSIGETVEEV+ SGF + PTL +G+ ++QV+P GIRHI
Sbjct: 488 EYDGYIVLSFTNATLVLSIGETVEEVTESGFLTSVPTLAVQQLGEEGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QG V++ + IV
Sbjct: 547 --------------------------------VQGR---------VNEWPAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+ Q+VIAL G ++YFEM + G L E E +M V ++L P G + S FLA
Sbjct: 566 ATNENQVVIALSSGEIVYFEMDAD-GSLAEYDEKKEMSGTVTSLSLGRVPEGLRRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL+++ M ++ G +T LY
Sbjct: 625 VGCDDCTVRILSLDPESTLEMKSIQALTSAPSSLLVMAM--------EDSTGGMT---LY 673
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R ++LG +P KLF++ Q
Sbjct: 674 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQ 716
>gi|367027320|ref|XP_003662944.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
42464]
gi|347010213|gb|AEO57699.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
42464]
Length = 1211
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 156/287 (54%), Gaps = 55/287 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D YIV+SF+NATLVLSIGETVEEV+ SGF + PTL MG+ ++QV+P GIRHI
Sbjct: 488 EYDGYIVLSFTNATLVLSIGETVEEVTESGFLTSVPTLAVQQMGEEGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QG V++ + IV
Sbjct: 547 --------------------------------VQGR---------VNEWPAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+ Q+VIAL G ++YFEM + G L E E +M V +++ P G + S FLA
Sbjct: 566 ATNENQVVIALSSGEIVYFEMDAD-GSLAEYDEKKEMSGTVTSLSIGKVPEGLRRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL ++ M ++ G +TL Y
Sbjct: 625 VGCDDCTVRILSLDPESTLEMKSIQALTSAPSSLSIMSM--------EDSTGGMTL---Y 673
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+L+D R ++LG +P KLF++ Q N+A
Sbjct: 674 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQ-NQA 719
>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
Length = 1189
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 149/284 (52%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +GD+ ++QV+P GIRH+
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHV- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G V++ + IV
Sbjct: 547 ---------------------------------RNGH--------VNEWAAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+ +AL G ++YFEM + G L E E +M V C++L + P G S FLA
Sbjct: 566 TANAHQVAVALSSGEIVYFEMDAD-GSLAEYDEKKEMFGTVTCLSLGDVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M S S LY
Sbjct: 625 VGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAIIAMDDSSSGGS----------TLY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEVRLFQVTVQG 718
>gi|358378986|gb|EHK16667.1| hypothetical protein TRIVIDRAFT_40938 [Trichoderma virens Gv29-8]
Length = 1212
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 151/284 (53%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +GD+ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G+ V+ + IV
Sbjct: 547 ---------------------------------RNGQ--------VNQWDAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N Q+ IAL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 566 STNAHQVAIALSSGEIVYFEMD-DDGSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M D +G T LY
Sbjct: 625 VGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAIISM-------EDSSSGGST---LY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQG 718
>gi|320587625|gb|EFX00100.1| nuclear mRNA splicing factor protein [Grosmannia clavigera kw1407]
Length = 1220
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 152/283 (53%), Gaps = 53/283 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DA+IV+SF+N TLVLSIGETVEEV+ +GF + PTL +GD+ ++QV+P GIRHI
Sbjct: 489 EYDAFIVLSFNNGTLVLSIGETVEEVTDTGFLSSVPTLAVQQLGDDGLIQVHPKGIRHI- 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR V++ + IV
Sbjct: 548 ---------------------------------RDGR--------VNEWAAPQHRSIVAA 566
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+V+AL G ++YFEM + G L E E +M V C++L P G S +LA
Sbjct: 567 ATNERQVVVALSSGEIVYFEMDTD-GSLAEYDEKKEMFGTVTCLSLGAVPEGRLRSSYLA 625
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L ++Q L SL+++ M D AG L Y
Sbjct: 626 VGCDDCTVRILSLDPETTLDNMSIQALTAAPSSLLIMAM-------DDSSAGGTAL---Y 675
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R R+LG + V+LF++ Q
Sbjct: 676 LHIGLHSGVYLRTVLDEVTGELTDTRQRFLGPKLVRLFQVSVQ 718
>gi|302680006|ref|XP_003029685.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
gi|300103375|gb|EFI94782.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
Length = 1213
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 157/286 (54%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 FDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPQGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+SD++ VN+ ++ QG K IV+
Sbjct: 543 ------LSDRR-----------VNEWRVP---QG-------------------KSIVQAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL +++ P G Q + FLAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIGEVPEGRQRTPFLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR+ISL P+ L +LQ L S+ + EM + A T +++
Sbjct: 623 GCEDQTVRIISLDPESTLDTISLQALTAPPSSICIAEML--------DAAINKTHPTMFV 674
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G L+D R R+LG+RPVKL ++ Q N A
Sbjct: 675 NIGLQNGVLLRTVLDPMTGQLTDTRTRFLGTRPVKLVRVAIQRNPA 720
>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
206040]
Length = 1212
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 151/284 (53%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +GD+ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G+ V+ + IV
Sbjct: 547 ---------------------------------RNGQ--------VNQWDAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N Q+ IAL G ++YFEM + G L E + +M V C++L P G S FLA
Sbjct: 566 STNAHQVAIALSSGEIVYFEMD-DDGSLAEYDDKKEMFGTVTCLSLGEVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M D +G T LY
Sbjct: 625 VGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAIISM-------EDSSSGGST---LY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQG 718
>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
Length = 1209
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 156/285 (54%), Gaps = 52/285 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYI++SF N TLVLSIGET+EEVS +GF ++PT+ +G++S++QVYP GIRH+
Sbjct: 480 QYDAYIILSFVNGTLVLSIGETIEEVSDTGFLSSSPTIAVQQIGEDSLLQVYPHGIRHV- 538
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+SD++ ++ RC IV
Sbjct: 539 -------LSDRRVNEW----RCP-----------------------------QHTTIVAA 558
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N RQ+ IAL +L+YFE+ E G L+E + + S VL M+++ P G Q + +LA
Sbjct: 559 TTNSRQVAIALSSAQLVYFELDLE-GQLNEYQDRKSLGSGVLAMSIAEVPEGRQRTPYLA 617
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIE-MGASDPTSSDEPAGPVTLGNL 239
VG D TVR+ISL P L+ +LQ L S+ + E M AS ++P +
Sbjct: 618 VGCEDQTVRIISLDPDTTLENISLQALTAPPSSICVAEIMDAS--IDKNQP-------TM 668
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
++ +GLQNG LLR V+D +G L+D R R+LGSRPV+L ++ G
Sbjct: 669 FVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGSRPVRLIRVNVHG 713
>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
Length = 1212
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 145/284 (51%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D YIV+SF+N TLVLSIGETVEEVS SGF + PT+ +G + ++QV+P GIRHI
Sbjct: 488 QYDTYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTIAAQLLGTDGLIQVHPRGIRHIR 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N V++ + IV
Sbjct: 548 NGN------------------------------------------VNEWSAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N Q+ IAL G ++YFEM + G L E E +M V ++L P G S FLA
Sbjct: 566 STNAHQVAIALSSGEIVYFEMDSD-GSLAEYDEKKEMFGTVTALSLGEVPEGRVRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M S S LY
Sbjct: 625 VGCDDATVRILSLDPESTLENKSVQALTAAPTSLAIIPMDDSSSGGS----------TLY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +GDLSD R ++LG +PV+LF++ G
Sbjct: 675 LHIGLHSGVYLRTVLDEITGDLSDTRQKFLGPKPVRLFQVSVGG 718
>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
98AG31]
Length = 1210
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 151/281 (53%), Gaps = 50/281 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD YI++ F NATLVLSIGET+ EVS +GF +PT+ + N ++Q++P GIRHI
Sbjct: 484 FDRYIILGFLNATLVLSIGETIVEVSDTGFLTNSPTISIQQLDKNGLLQIHPTGIRHI-- 541
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
L GG V++ K +KIV
Sbjct: 542 ------------------------------HLNGG---------VTEWKVPAGRKIVVST 562
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
NQRQ+V+ L GG LIYFE+ E G L+E E +M S + ++LS P G Q + FLA+
Sbjct: 563 SNQRQVVVGLSGGELIYFELDLE-GQLNEYQEQKEMGSTITTLSLSEVPKGRQRTPFLAI 621
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
GL + TV++ISL P L+ +LQ L + S+ + E+ S ++E L++
Sbjct: 622 GLENLTVQIISLDPNSVLETISLQALTSVPSSICIAELLDSSIDKNNE--------TLFV 673
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRC 282
+GL NG LLR V+D +G L+D R R+LGSRPVKL +++
Sbjct: 674 NIGLSNGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKV 714
>gi|367050506|ref|XP_003655632.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
gi|347002896|gb|AEO69296.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
Length = 1211
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 150/284 (52%), Gaps = 56/284 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D YIV+SF+NATLVLSIGETVEEV+ SGF + PTL +G+ ++QV+P GIRHI
Sbjct: 488 EYDGYIVLSFTNATLVLSIGETVEEVTESGFLTSVPTLAVQQLGEEGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QG V++ + IV
Sbjct: 547 --------------------------------VQGR---------VNEWPAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+ Q+VIAL G ++YFEM + G L E E +M V ++L P G S FLA
Sbjct: 566 ATNESQVVIALSSGEIVYFEMDAD-GSLAEYDEKKEMSGTVTSLSLGKVPEGLTRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN-L 239
VG D TVR++ L P+ L+ K++Q L SL ++ M S T GN L
Sbjct: 625 VGCDDCTVRILGLDPESTLEMKSIQALTSAPSSLSIMSMEDS------------TGGNTL 672
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
YL++GL +G LR V+D+ +G+L+D R ++LG +P KLF++ Q
Sbjct: 673 YLHIGLHSGVYLRTVLDEVTGELTDTRSKFLGPKPTKLFQVSVQ 716
>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
Length = 1206
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 147/284 (51%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PT+ +G + ++QV+P GIRHI
Sbjct: 482 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTIAAQLLGTDGLIQVHPRGIRHIR 541
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N V++ + IV
Sbjct: 542 NGN------------------------------------------VNEWSAPQHRSIVAA 559
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N Q+ IAL G ++YFEM + G L E E +M V ++L P G S FLA
Sbjct: 560 STNSHQVAIALSSGEIVYFEMDSD-GSLAEYDEKKEMFGTVTALSLGEVPEGRVRSSFLA 618
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P+ L+ K++Q L SL +I M S S LY
Sbjct: 619 VGCDDSTVRILSLDPESTLENKSVQALTAAPTSLAIIPMDDSSSGGS----------TLY 668
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG +PV+LF++ G
Sbjct: 669 LHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPVRLFQVTVGG 712
>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1212
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 151/284 (53%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +G++ ++QV+P GIRH+
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHV- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G +++ + IV
Sbjct: 547 ---------------------------------RNGH--------INEWAAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N Q+ IAL G ++YFEM + G L E E +M V C++L + P G S FLA
Sbjct: 566 SANAHQVAIALSSGEIVYFEMDAD-GSLAEYDEKKEMFGTVTCLSLGDVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P L+ K++Q L SL +I M D +G T LY
Sbjct: 625 VGCDDCTVRILSLDPDSTLENKSVQALTAAPTSLAIIAM-------EDSSSGGST---LY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEVRLFQVTVQG 718
>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
Length = 1216
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 151/283 (53%), Gaps = 53/283 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIV+SF+N TLVLSIGETVEEVS +GF + PTL +GD+ +VQV+P GIRHI
Sbjct: 488 EYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
R V V++ + IV
Sbjct: 547 --------------------RNGV---------------------VNEWSSPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V ++L P G S +LA
Sbjct: 566 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKKEMFGTVTSLSLGEVPEGRLRSSYLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L +L ++ M D +G TL Y
Sbjct: 625 VGCDDCTVRILSLDPESTLESKSVQALTAAPSALSIMSM-------EDSSSGGTTL---Y 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ Q
Sbjct: 675 LHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQ 717
>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
Length = 1223
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 151/283 (53%), Gaps = 53/283 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIV+SF+N TLVLSIGETVEEVS +GF + PTL +GD+ +VQV+P GIRHI
Sbjct: 488 EYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
R V V++ + IV
Sbjct: 547 --------------------RNGV---------------------VNEWSSPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V ++L P G S +LA
Sbjct: 566 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKKEMFGTVTSLSLGEVPEGRLRSSYLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L +L ++ M D +G TL Y
Sbjct: 625 VGCDDCTVRILSLDPESTLESKSVQALTAAPSALSIMSM-------EDSSSGGTTL---Y 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ Q
Sbjct: 675 LHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQ 717
>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
Length = 1229
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 151/283 (53%), Gaps = 53/283 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIV+SF+N TLVLSIGETVEEVS +GF + PTL +GD+ +VQV+P GIRHI
Sbjct: 488 EYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
R V V++ + IV
Sbjct: 547 --------------------RNGV---------------------VNEWSSPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V ++L P G S +LA
Sbjct: 566 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDEKKEMFGTVTSLSLGEVPEGRLRSSYLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L +L ++ M D +G TL Y
Sbjct: 625 VGCDDCTVRILSLDPESTLESKSVQALTAAPSALSIMSM-------EDSSSGGTTL---Y 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ Q
Sbjct: 675 LHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQ 717
>gi|340520436|gb|EGR50672.1| predicted protein [Trichoderma reesei QM6a]
Length = 1212
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 150/284 (52%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF + PTL +G++ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G+ V+ + IV
Sbjct: 547 ---------------------------------RNGQ--------VNQWDAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+ IAL G ++YFEM + G L E E +M V C++L P G S FLA
Sbjct: 566 TTNAHQVAIALSSGEIVYFEMD-DDGSLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L SL +I M D +G T LY
Sbjct: 625 VGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAIISM-------EDSSSGGST---LY 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQG 718
>gi|350290373|gb|EGZ71587.1| Pre-mRNA-splicing factor rse-1 [Neurospora tetrasperma FGSC 2509]
Length = 1209
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 150/283 (53%), Gaps = 54/283 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF T PTL MG++ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QG V++ + IV
Sbjct: 547 --------------------------------VQGR---------VNEWPAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL G ++YFEM + G L E E +M V +++ P G + S FLA
Sbjct: 566 TANENQVVIALSSGEIVYFEMDSD-GSLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P L+ K++Q L +L ++ M S S+ LY
Sbjct: 625 VGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSMEDSFGGST-----------LY 673
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R ++LG +P KLF++ Q
Sbjct: 674 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQ 716
>gi|336257679|ref|XP_003343663.1| hypothetical protein SMAC_08834 [Sordaria macrospora k-hell]
gi|380091896|emb|CCC10625.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1209
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 151/283 (53%), Gaps = 54/283 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF T PTL MG++ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTTAPTLAVRQMGEDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QG V++ + IV
Sbjct: 547 --------------------------------VQGR---------VNEWPAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL G ++YFEM + G L E E +M V +++ P G + S FLA
Sbjct: 566 TANENQVVIALSSGEIVYFEMDSD-GSLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P L+ K++Q L +L ++ M ++ G TL Y
Sbjct: 625 VGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSM--------EDSFGGFTL---Y 673
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R ++LG +P KLF++ Q
Sbjct: 674 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQ 716
>gi|189044515|sp|Q7RYR4.2|RSE1_NEUCR RecName: Full=Pre-mRNA-splicing factor rse-1
Length = 1209
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 150/283 (53%), Gaps = 54/283 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SF+N TLVLSIGETVEEVS SGF T PTL MG++ ++QV+P GIRHI
Sbjct: 488 QYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+QG V++ + IV
Sbjct: 547 --------------------------------VQGR---------VNEWPAPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL G ++YFEM + G L E E +M V +++ P G + S FLA
Sbjct: 566 TANENQVVIALSSGEIVYFEMDSD-GSLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P L+ K++Q L +L ++ M S S+ LY
Sbjct: 625 VGCDDCTVRILSLDPDSTLEMKSIQALTAAPSALSIMSMEDSFGGST-----------LY 673
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L++GL +G LR V+D+ +G+L+D R ++LG +P +LF++ Q
Sbjct: 674 LHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTRLFQVSVQ 716
>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f.
nagariensis]
gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f.
nagariensis]
Length = 1221
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 156/295 (52%), Gaps = 59/295 (20%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQ---------- 50
EFDA+IVVSF+NATLV SIGE V+E + SGF GT PTL + DNS++Q
Sbjct: 468 EFDAFIVVSFANATLVFSIGEEVKETNESGFLGTVPTLHTQLLADNSMLQATFFDLSEPQ 527
Query: 51 VYPDGIRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKK 110
VYP G+RHI + D++ +++ K
Sbjct: 528 VYPGGLRHI-------------KPDRR----------------------------INEWK 546
Query: 111 ESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAP 170
++ I A N++Q+ IALQGG + FE+ TG+L E +E + +V C+ + P
Sbjct: 547 VPGRRNIKAAASNEKQVAIALQGGEVTVFELEVGTGLLVE-AEKRDLGEDVSCLEIPPVP 605
Query: 171 SGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
G S FLAVG D TVR++SL P LK ++Q L + ES++M+ + E
Sbjct: 606 EGLVRSSFLAVGTYDQTVRVLSLDPGQGLKNLSMQALNSVPESILMLYNTGPGTERATE- 664
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
G L+L+VGLQNG L+R VD+ SG L+D+R R+LG++P KLF +GN
Sbjct: 665 ------GGLFLHVGLQNGILIRSEVDRISGQLTDSRTRFLGTKPPKLFAAAVRGN 713
>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1196
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 155/288 (53%), Gaps = 54/288 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YI+VSF NATLVLSIG+TV EV+ SG GTT TL M D S++Q++P G+RHI
Sbjct: 468 EYDSYIIVSFLNATLVLSIGDTVSEVNDSGILGTTTTLQACLMSDESLLQIHPGGLRHIK 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ +++ + +K+I +C
Sbjct: 528 A-------------DKR----------------------------INEWRTPGRKQISKC 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N +Q+VIAL GG +IYFE+ G L E E ++ ++ C+ + P G +RFLA
Sbjct: 547 TCNSKQVVIALTGGEVIYFELD-SAGQLIEV-EKLETSGDIACLDIGPVPEGALRNRFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLA-ESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+G D TVR++SL P DCL+ +Q L A SL++++ ++ T G L
Sbjct: 605 MGSYDGTVRVMSLNPDDCLQTLAVQALKGSAPSSLLVLQTAGTESTQ----------GGL 654
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L VG+ NG L+R +DQ SG LSD RMR+LG+R KL + +G A
Sbjct: 655 LLNVGMANGVLIRATIDQVSGQLSDMRMRFLGARAPKLVRTSVRGAPA 702
>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1216
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 160/286 (55%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 FDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPQGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++D++ VN+ ++ QG K IV A
Sbjct: 543 ------LADRR-----------VNEWRVP---QG-------------------KTIVSAA 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL +++ P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSVGEVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR+ISL P+ L+ +LQ L ++ + +M + + +P +++
Sbjct: 623 GCEDQTVRIISLDPESTLETISLQALTAPPSAICIADMLDAS-INKTQP-------TMFV 674
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G L+D R R+LG+RP++L +++ GN A
Sbjct: 675 NIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLVRVQIHGNPA 720
>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
Length = 1273
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 158/281 (56%), Gaps = 47/281 (16%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDN---SIVQVYPDGIRHI 59
DAYIVVSF+NATLVLSIG+TVEEV+ +G T+ TL SA+GD+ S++Q++P G+RH+
Sbjct: 489 DAYIVVSFTNATLVLSIGDTVEEVTDTGILATSSTLAVSALGDDDDGSLIQIHPSGVRHV 548
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
N V++ + +KKI
Sbjct: 549 RGNNKG----------------------------------------VNEWRAPGRKKITA 568
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
CA N+ Q ++AL GG L+YFE+ E G L E E I+ SEV+ + + P G ++F
Sbjct: 569 CACNRGQAIVALTGGELVYFELD-EAGQLLEI-EKIETSSEVVSVDIPPIPDGSLRAKFA 626
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
AV D+TVR++SL P + L+ +Q P ES++++E+ ++ T+ ++ AG ++
Sbjct: 627 AVAGYDSTVRVLSLNPGEALRTVGVQATPSPPESVLLLEV--NNKTTKNKKAGSSAPPSM 684
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
+L VGL NG L+R VD+ SG LSD R R++G RP KL +I
Sbjct: 685 FLNVGLSNGILVRCEVDRVSGALSDARSRFVGQRPPKLNRI 725
>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 151/284 (53%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D+YIV+SF+N TLVLSIGETVEEVS +GF + TL +G++ +VQV+P GIRHI
Sbjct: 488 QYDSYIVLSFTNGTLVLSIGETVEEVSDTGFLSSVSTLAVQQLGEDGLVQVHPRGIRHI- 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
R V V++ + IV
Sbjct: 547 --------------------RSGV---------------------VNEWPTPQHRSIVAA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N+RQ+ +AL G ++YFEM + G L E E +M V ++L P G S FLA
Sbjct: 566 ATNERQVAVALSSGEIVYFEMDTD-GSLAEYDERKEMSGTVTSLSLGEVPEGRLRSSFLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++SL P+ L+ K++Q L +L ++ M D +G TL Y
Sbjct: 625 VGCDDCTVRILSLDPETTLESKSVQALTAAPSALSIMAM-------EDSSSGGTTL---Y 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR V+D+ +G+L+D R ++LG + V+LF++ QG
Sbjct: 675 LHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAVRLFQVSVQG 718
>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
Length = 1285
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 154/287 (53%), Gaps = 45/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YIV+SF N TL+LSIGET+EEVS SG ++ TL +G+++++QV+P GIRHI
Sbjct: 550 EYDSYIVLSFVNGTLLLSIGETIEEVSDSGLLTSSSTLAVQQLGEDALLQVHPHGIRHI- 608
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+V +N+ + +L GR + IV
Sbjct: 609 ------------------LVDKQINE-WVTPSLPNGR----------------QTTIVAT 633
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+V+AL L+YFE+ + G L+E E M + VL M++ P G Q + +LA
Sbjct: 634 CTNERQVVVALSSNELVYFELDMD-GQLNEYQERKAMGAPVLTMSMPECPEGRQRTAYLA 692
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L ++Q L A S+ M EM D T A +
Sbjct: 693 VGCGDSTVRIVSLEPSSTLASISIQALTAPASSICMAEM--HDSTVDRHHA------TTF 744
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +GLQNG LLR V+D +G L+D R R+LGS+ V+L + R G A
Sbjct: 745 VNIGLQNGVLLRTVLDGVTGQLTDTRTRFLGSKAVRLVRTRVHGQTA 791
>gi|392570042|gb|EIW63215.1| hypothetical protein TRAVEDRAFT_161375 [Trametes versicolor
FP-101664 SS1]
Length = 1213
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 154/286 (53%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QVYP GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVYPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++D++ V++ K K IV
Sbjct: 543 ------LADRR---------------------------------VNEWKVPSGKTIVCAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL ++++ P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSVAEVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR++SL P+ L+ +LQ L ++ + +M + S P T N
Sbjct: 623 GCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDASINKSQ----PTTFVN--- 675
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G L+D R R+LG+RP++L ++ Q N A
Sbjct: 676 -IGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIRLLRVNIQQNPA 720
>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1213
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 60/289 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 FDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++D++ VN+ ++ QG K IV
Sbjct: 543 ------LADRR-----------VNEWRVP---QG-------------------KTIVSAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL +++ + P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIGDVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEM-----GASDPTSSDEPAGPVTL 236
G D TVR+ISL P+ L+ +LQ L ++ + +M S PT
Sbjct: 623 GCEDQTVRIISLDPETTLETISLQALTAPPSAICIADMLDASINKSQPT----------- 671
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
+++ +GLQNG LLR V+D +G L+D R R+LG+RP+KL +++ Q N
Sbjct: 672 --MFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVQIQRN 718
>gi|393217872|gb|EJD03361.1| hypothetical protein FOMMEDRAFT_108572 [Fomitiporia mediterranea
MF3/22]
Length = 1213
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 159/286 (55%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPQGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++D++ VN+ ++ QG + IV
Sbjct: 543 ------LADRR-----------VNEWRVP---QG-------------------RTIVAAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ E G L+E + M S VL +++ P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLE-GQLNEYQDRKAMGSTVLALSVGEVPPGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR++SL P+ L+ +LQ L ++ + +M S ++P +++
Sbjct: 623 GCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDSS-IDKNQP-------TMFV 674
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G L+D R R+LG+RPVKL +++ Q N +
Sbjct: 675 NIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVKLMRVQVQRNSS 720
>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
Length = 1221
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 154/287 (53%), Gaps = 45/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D+YI++SF N TLVLSIGET+EEVS SGF ++ TL +G+++++QV+P GIRHI
Sbjct: 486 EHDSYIILSFVNGTLVLSIGETIEEVSDSGFLTSSSTLAVQQLGEDALLQVHPHGIRHI- 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+V +N+ +L GR + IV
Sbjct: 545 ------------------LVDKQINE-WATPSLPNGR----------------QTTIVAT 569
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+V+A L+YFE+ + G L+E E M + VL M++++ P G Q + +LA
Sbjct: 570 CTNERQVVVAFSSNELVYFELDMD-GQLNEYQERKAMGAAVLTMSMADCPEGRQRTPYLA 628
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR+ISL P L ++Q L A S+ M EM D T A +
Sbjct: 629 VGCDDSTVRIISLEPNSTLASISIQALTAPASSICMAEM--HDATIDRNHA------TTF 680
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +GLQNG LLR V+D +G L+D R R+LGS+ V+L + + G A
Sbjct: 681 VNIGLQNGVLLRTVLDAVTGQLTDTRTRFLGSKAVRLIRTKVHGQSA 727
>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
Length = 1218
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 153/282 (54%), Gaps = 53/282 (18%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAK 62
D Y +VS+++AT+VLS+G+ V VS SG T T+ S +G++ ++QVY DGIRHI A
Sbjct: 492 DTYFIVSWASATVVLSVGDQVAPVSDSGLLLTVGTIAVSRIGEDDLLQVYTDGIRHIRAD 551
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
+ V++ + +++IVR A+
Sbjct: 552 SR-----------------------------------------VNEWRTPGRRQIVRAAI 570
Query: 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
N RQ+VIAL GG L+YFE+ TG L+E +E +EV +A++ P+ + +RFLAV
Sbjct: 571 NDRQVVIALAGGELVYFELD-ITGQLNEFAERFTSSAEVCALAIAPVPADRRRARFLAVA 629
Query: 183 LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLY 242
DNTVR++SL D L+ +Q + D A SL +DP+ + A +L L
Sbjct: 630 AEDNTVRIVSLELSDTLQSLGVQTVADRASSLCF-----ADPSLDNSSA------DLVLG 678
Query: 243 VGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
VGLQNG LLR V+ +SG+L+D R RYLG+RPV LF + G
Sbjct: 679 VGLQNGILLRTSVEPSSGNLTDTRTRYLGTRPVMLFPSKVHG 720
>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1213
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 153/284 (53%), Gaps = 50/284 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD+YI++SF N TLVLSIGET+EEV +GF ++PTL +G ++++QV+P GIRH+
Sbjct: 485 FDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSSPTLAVQQLGADALLQVHPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+V VN+ ++ QG K IV
Sbjct: 543 -----------------LVDRRVNEWRVP---QG-------------------KTIVCAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ E G L+E E M S VL +++ P G Q + FLAV
Sbjct: 564 TNRRQVVVALSSAELVYFELDLE-GQLNEYQERKAMGSTVLALSVGEVPEGRQRTPFLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR++SL P+ L+ +LQ L ++ + +M + P T N
Sbjct: 623 GCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADM----LDAGINKVQPTTFVN--- 675
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
+GLQNG LLR V+D +G L+D R R+LG+RP+KL +++ Q N
Sbjct: 676 -IGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVQIQRN 718
>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
Length = 1213
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 157/291 (53%), Gaps = 60/291 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVLSIGET+EEV +GF ++PT+ +G ++++QV+P GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSSPTIAVQQIGADALLQVHPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++D++ VN+ ++ QG K IV
Sbjct: 543 ------LADRR-----------VNEWRVP---QG-------------------KTIVTAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL +++ P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIGEVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEM-----GASDPTSSDEPAGPVTL 236
G D TVR+ISL P+ L+ +LQ L S+ + +M S PT
Sbjct: 623 GCEDQTVRIISLDPETTLETLSLQALTAPPSSICIADMLDASINKSQPT----------- 671
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+++ +GLQNG LLR V+D +G L+D R R+LG+RP+KL ++ N A
Sbjct: 672 --MFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLIRVPVHKNPA 720
>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666
SS1]
Length = 1213
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 157/291 (53%), Gaps = 60/291 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++D++ VN+ ++ QG K IV
Sbjct: 543 ------LADRR-----------VNEWRVP---QG-------------------KTIVSAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL +++ P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIGEVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEM-----GASDPTSSDEPAGPVTL 236
G D TVR+ISL P+ L+ +LQ L +L + +M S PT
Sbjct: 623 GCEDQTVRIISLDPESTLETISLQALTAPPSALCIADMLDAGINKSQPT----------- 671
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+++ +GLQNG LLR V+D +G L+D R R+LG+RPV+L +++ Q A
Sbjct: 672 --MFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVRLIRVQIQHQPA 720
>gi|353236335|emb|CCA68332.1| probable splicing factor 3B subunit 3 [Piriformospora indica DSM
11827]
Length = 1243
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 153/285 (53%), Gaps = 50/285 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D+YIV+SF N TLVLS GE +EE+ SGF + PTL +G ++++QV+P GIRH+
Sbjct: 514 QYDSYIVLSFINGTLVLSFGEEIEEIPNSGFLSSEPTLAAQQLGSDALLQVHPRGIRHV- 572
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+SDK+ VN+ + I + IV
Sbjct: 573 -------LSDKR-----------VNEWRAPIGM----------------------AIVAA 592
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+V+AL L+YFE+ E G L+E E M S VL +++ P G Q ++LA
Sbjct: 593 TTNKRQVVVALSSAELVYFELDYE-GQLNEFQERKAMGSTVLALSVGEVPEGLQRFKYLA 651
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR+ISL P L+ +LQ + S+ + +M SS + P T N
Sbjct: 652 VGCEDQTVRIISLDPDSTLEMISLQAVTAPPSSISIADMF----DSSIDKHRPTTFVN-- 705
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
+GLQNG LLR V+D T+G L+D R R+LG+RPV+L + + G+
Sbjct: 706 --IGLQNGVLLRTVLDPTNGKLADTRTRFLGNRPVRLVRTQVHGS 748
>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
Length = 1221
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 154/287 (53%), Gaps = 45/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YI++SF N TLVLSIGET+EEVS SGF ++ TL +G ++++QV+P GIRH+
Sbjct: 486 EYDSYIILSFVNGTLVLSIGETIEEVSDSGFLTSSSTLAVQQLGQDALLQVHPHGIRHV- 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+V +N+ +L GR + IV
Sbjct: 545 ------------------LVDKQINE-WATPSLPNGR----------------QTTIVAT 569
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+V+AL L+YFE+ + G L+E E M + VL M++ + P G Q + +LA
Sbjct: 570 CTNERQVVVALSSNELVYFELDMD-GQLNEYQERKAMGAGVLTMSMPDCPEGRQRTPYLA 628
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR+ISL P L ++Q L A S+ M EM D T A +
Sbjct: 629 VGCDDSTVRIISLEPNSTLASISIQALTAPASSICMAEM--LDATIDRNHA------TTF 680
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +GLQNG LLR ++D +G L+D R R+LGS+ V+L + + G A
Sbjct: 681 VNIGLQNGVLLRTILDAVTGQLTDTRTRFLGSKAVRLIRTKVHGQAA 727
>gi|392593521|gb|EIW82846.1| hypothetical protein CONPUDRAFT_81012 [Coniophora puteana
RWD-64-598 SS2]
Length = 1213
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 60/289 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPQGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+SD++ VN+ ++ QG K IV
Sbjct: 543 ------LSDRR-----------VNEWRVP---QG-------------------KTIVCAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL +++ P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDWKAMGSTVLALSVGEVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEM-----GASDPTSSDEPAGPVTL 236
G D TVR+ISL P+ L+ +LQ L ++ + +M S PT
Sbjct: 623 GCEDQTVRIISLDPESTLETISLQALTAPPSAICIADMLDASINKSQPT----------- 671
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
+++ +GLQNG LLR V+D +G L+D R R+LG+RP++L ++ Q N
Sbjct: 672 --MFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLVRVTVQKN 718
>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1214
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 153/285 (53%), Gaps = 50/285 (17%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAK 62
D+YI++SF N TLVLSIGET+EEV +GF + PT+ +G ++++QV+P GIRH+
Sbjct: 485 DSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTIAVQQIGADALLQVHPQGIRHV--- 541
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
++D++ V++ + K IV
Sbjct: 542 -----LADRR---------------------------------VNEWRVPAGKTIVTATT 563
Query: 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
N+RQ+V+AL L+YFE+ E G L+E + M S VL +++ P G Q + FLAVG
Sbjct: 564 NKRQVVVALSSAELVYFELDLE-GQLNEYQDRKAMGSTVLALSIGEVPEGRQRTPFLAVG 622
Query: 183 LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLY 242
D TVR+ISL P+ L+ +LQ L ++ + +M +S P +++
Sbjct: 623 CEDQTVRIISLDPESTLETISLQALTAPPTAICIADML----DASINKVHP----TMFVN 674
Query: 243 VGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G L+D R R+LG+RPV+L ++ Q N A
Sbjct: 675 IGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPVRLIRVNVQRNPA 719
>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 60/289 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVL IGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 484 YDSYIILSFVNGTLVLCIGETIEEVQDTGFLSSAPTLAVQQIGYDALLQVHPHGIRHV-- 541
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+SDK+ VN+ ++ QG K IV
Sbjct: 542 ------LSDKR-----------VNEWRVP---QG-------------------KTIVAAT 562
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL ++++ P G Q + +LAV
Sbjct: 563 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIAEVPEGRQRTPYLAV 621
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEM-----GASDPTSSDEPAGPVTL 236
G D TVR++SL P+ L+ +LQ L ++ + +M + PTS
Sbjct: 622 GCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDAGINKTQPTS---------- 671
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
++ +GLQNG LLR V+D +G L+D R R+LG+RP+KL ++ Q N
Sbjct: 672 ---FVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIKLIRVLVQRN 717
>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1213
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 155/286 (54%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++D++ V++ + K IV
Sbjct: 543 ------LADRR---------------------------------VNEWRVPSNKTIVAAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL +++ + P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIGDVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR+ISL P+ L+ +LQ L ++ + +M +S A P +++
Sbjct: 623 GCEDQTVRIISLDPESTLETISLQALTAPPSAICIADM----LDASINKAQP----TMFV 674
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G L+D R R+LG+RP+KL ++ + A
Sbjct: 675 NIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVLIHKHPA 720
>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
TFB-10046 SS5]
Length = 1244
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 152/288 (52%), Gaps = 54/288 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD YIV+SF N TLVL+IGET+EE +GF PTL +GD++++QVYP GIRHI
Sbjct: 465 FDTYIVLSFVNGTLVLTIGETIEECQETGFLSAEPTLGVQQIGDDALLQVYPHGIRHI-- 522
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++DK+ V++ K K IV+ A
Sbjct: 523 ------LADKR---------------------------------VNEWKVPSGKTIVQAA 543
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N RQ+V+AL L+YFE+ + G L+E + M S VL ++++ P G Q + +LAV
Sbjct: 544 TNSRQVVVALNSAELVYFELDLD-GQLNEYQDRKAMGSVVLALSMAEVPEGRQRTPYLAV 602
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGL--PDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
G D TVR+ISL P + L+ +LQ L P A +V I A + S L
Sbjct: 603 GCEDQTVRIISLDPDNTLETISLQALTAPPSAICIVAIIDAAVNKISE----------TL 652
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++ +GL +G LR V+D +G+L+D R R+LG+RP++L ++ G A
Sbjct: 653 FVNIGLTSGLFLRTVLDPVTGELTDTRTRFLGTRPIRLNRVTIAGKPA 700
>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
Length = 1203
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 150/285 (52%), Gaps = 50/285 (17%)
Query: 2 FDAYIVVSFSNATLVLSIG-ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD Y++VSF TLVLSIG E V EV SGF TL + DNS +QV P I H+
Sbjct: 470 FDKYMIVSFQQQTLVLSIGQEKVSEVKDSGFVDNERTLHVGILEDNSYIQVTPKSIIHVK 529
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K + K +S + KIV+
Sbjct: 530 GDQQNRKRA---------------------------------------KWDSGQGKIVKA 550
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
NQRQ+ ++++GG+++YFE+ +G L+E E+ +SEV C+ +++ P G Q RFLA
Sbjct: 551 CSNQRQVAVSIEGGQIVYFELDEMSGTLNEV-ESRFYDSEVACIDIADVPEGRQRCRFLA 609
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG AD TV+++SL P+ CL++ ++Q LP ES+ +I + + L+
Sbjct: 610 VGYADKTVKIMSLDPESCLQRISMQALPAHPESVALISFQRDEVAQQQQ--------QLF 661
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
L+VGL NG LLR +VD +G LSD+R R+LG+ + L K+R QGN
Sbjct: 662 LHVGLVNGVLLRTLVDNVTGVLSDSRTRFLGTNSISLAKVR-QGN 705
>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
Length = 1216
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 150/288 (52%), Gaps = 56/288 (19%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDN-SIVQVYPDGIRHIG 60
FD YI++SFS T+VLS+GE V EV+ SGF TT T+ S +G++ VQV+P GIRHI
Sbjct: 486 FDKYIILSFSEFTMVLSVGENVAEVTESGFLTTTKTIYASNIGESGEFVQVHPKGIRHI- 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVS-DKKESDKKKIVR 119
HP ++ S K I +
Sbjct: 545 -------------------------------------------HPDRVNEWNSGNKIIEK 561
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
AVN QIV++L GG +IYFE +G L E +E + +V C+ALS G RFL
Sbjct: 562 AAVNGYQIVVSLSGGEIIYFEYDTSSGNLIE-TERNDLSQDVACLALSPIQDGRTRGRFL 620
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
AVG D TVRLISL D + + Q LP ESL +IE+ + S DE + L
Sbjct: 621 AVGFYDKTVRLISLGEYDMMSILSRQALPADPESLSLIELQSGH--SRDETS-------L 671
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
YL +GL NG LLR VD ++G+LSD R R+LG++ VKL ++ +G+ A
Sbjct: 672 YLNIGLSNGILLRSTVDSSTGELSDTRSRFLGTKGVKLRNVKVRGDNA 719
>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
TFB-10046 SS5]
Length = 1214
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 151/286 (52%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD YIV+SF N TLVL+IGET+EE +GF PTL +GD++++QVYP GIRHI
Sbjct: 488 FDTYIVLSFVNGTLVLTIGETIEECQETGFLSAEPTLGVQQIGDDALLQVYPHGIRHI-- 545
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++DK+ V++ K K IV+ A
Sbjct: 546 ------LADKR---------------------------------VNEWKVPSGKTIVQAA 566
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N RQ+V+AL L+YFE+ + G L+E + M S VL ++++ P G Q + +LAV
Sbjct: 567 TNSRQVVVALNSAELVYFELDLD-GQLNEYQDRKAMGSVVLALSMAEVPEGCQRTPYLAV 625
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR+ISL P + L+ +LQ L ++ ++ M + E L++
Sbjct: 626 GCEDQTVRIISLDPDNTLETISLQALTAPPSAICIVAMIDAAVNKISE--------TLFV 677
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GL NG LR V+D +G+L+D R R+LG+RP++L ++ G A
Sbjct: 678 NIGLTNGLFLRTVLDPVTGELTDTRTRFLGTRPIRLNRVTIAGKPA 723
>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
bisporus H97]
Length = 1213
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 155/286 (54%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGSDALLQVHPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++D++ V++ + K IV
Sbjct: 543 ------LADRR---------------------------------VNEWRVPSNKIIVAAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL +++ + P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIGDVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR+ISL P+ L+ +LQ L ++ + +M +S A P +++
Sbjct: 623 GCEDQTVRIISLDPESTLETISLQALTAPPSAICIADM----LDASINKAQP----TMFV 674
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G L+D R R+LG+RP+KL ++ + A
Sbjct: 675 NIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLVRVLIHKHPA 720
>gi|395333071|gb|EJF65449.1| hypothetical protein DICSQDRAFT_178021 [Dichomitus squalens
LYAD-421 SS1]
Length = 1213
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 153/286 (53%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVL IGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLCIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+SD++ V++ + K IV
Sbjct: 543 ------LSDRR---------------------------------VNEWRVPSGKTIVCAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL ++++ P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIAEVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR++SL P+ L+ +LQ L ++ + +M + + P T N
Sbjct: 623 GCEDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDAGINKTQ----PTTFVN--- 675
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GLQNG LLR V+D +G L+D R R+LG+RP++L ++ Q N A
Sbjct: 676 -IGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIRLLRVNIQRNPA 720
>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
H99]
Length = 1217
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 143/287 (49%), Gaps = 50/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YIV+SF N TLVLSIGET+EEV+ +GF + PTL +G+ ++QV+P G+RHI
Sbjct: 488 EYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVHPYGLRHIR 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A + V + + IV
Sbjct: 548 AADR-----------------------------------------VDEWPAPPGQTIVAA 566
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
NQRQ+VIAL L+YFE+ PE G L E E + C+ ++ P G + + FLA
Sbjct: 567 TTNQRQVVIALSTAELVYFELDPE-GSLSEYQEKKALPGNATCVTIAEVPEGRRRTPFLA 625
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG + TV +ISL P L +LQ L S+ + E+ TS D+ ++
Sbjct: 626 VGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSICLAEIFD---TSIDK-----NRATMF 677
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR VVD G LSD R+R+LG++P KL + QG +
Sbjct: 678 LNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRANVQGQPS 724
>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 1217
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 143/287 (49%), Gaps = 50/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YIV+SF N TLVLSIGET+EEV+ +GF + PTL +G+ ++QV+P G+RHI
Sbjct: 488 EYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVHPYGLRHIR 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A + V + + IV
Sbjct: 548 AADR-----------------------------------------VDEWPAPPGQTIVAA 566
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
NQRQ+VIAL L+YFE+ PE G L E E + C+ ++ P G + + FLA
Sbjct: 567 TTNQRQVVIALSTAELVYFELDPE-GSLSEYQEKKALPGNATCVTIAEVPEGRRRTPFLA 625
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG + TV +ISL P L +LQ L S+ + E+ TS D+ ++
Sbjct: 626 VGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSICLAEIFD---TSIDK-----NRATMF 677
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR VVD G LSD R+R+LG++P KL + QG +
Sbjct: 678 LNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRANVQGQPS 724
>gi|340508225|gb|EGR33979.1| splicing factor subunit 130kda, putative [Ichthyophthirius
multifiliis]
Length = 983
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 151/286 (52%), Gaps = 50/286 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
F YI++SFS TLVLSI + V++V+ SG T+ + + DN+I+QV PDG RHI
Sbjct: 465 FSKYIILSFSKQTLVLSISDRVQQVTDSGIDLNKQTIHANLLEDNAIIQVMPDGFRHI-- 522
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
V++R + +G KIV+
Sbjct: 523 ---------------------RVDKRVQQLKTEG--------------------KIVKAV 541
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
NQ+QI I+LQGG +IYFE+ G L E ++T ++ E+ CM + P G Q S+FL+V
Sbjct: 542 SNQKQIAISLQGGDIIYFELD-YAGQLIEVAKT-NLQEEIECMDIGEVPFGRQKSKFLSV 599
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G +D++VR++SL CL++ ++Q LP +AE++ +IEM + LYL
Sbjct: 600 GCSDHSVRILSLENDTCLQKISIQALPGIAENVSLIEMKRGSGLEQEAEQ-----YQLYL 654
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
YVGL+NG LLR VDQ +G LSD R R L PV+ K + QG A
Sbjct: 655 YVGLKNGILLRASVDQITGSLSDTRTRVLSGAPVRTCKYQVQGQPA 700
>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
Length = 1197
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 155/286 (54%), Gaps = 47/286 (16%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D YIVVSF +ATLVL +GETVEEV+ SGF +L + + D+S +Q++ +GIRH+
Sbjct: 463 YDKYIVVSFEDATLVLEVGETVEEVTQSGFLRDHGSLLVALLEDDSKLQIHANGIRHVP- 521
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ PV++ K KK I CA
Sbjct: 522 ----------------------------------------KFQPVTEWKAPGKKVIEHCA 541
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N RQ+VI+L GG +IYFE+ ++G L E + + + EV + L P G Q +F+AV
Sbjct: 542 ANSRQVVISLAGGEIIYFELG-QSGELAEKGK-LDLGFEVCSLDLGEVPEGRQRFQFMAV 599
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G DNTVR++SL P D +QK+ L +L + ++ S+P++ D + +L+L
Sbjct: 600 GSWDNTVRILSLDPNDLFRQKSTLALTSHPHTLCLAQL-QSEPSTPDSEH---SSQSLFL 655
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GL NG L + ++D + +L+D+R R+LG+ PVKLF++ +G +
Sbjct: 656 SIGLDNGVLQQSLIDPITANLTDSRSRFLGTNPVKLFRVAVEGKRS 701
>gi|449546293|gb|EMD37262.1| hypothetical protein CERSUDRAFT_83017 [Ceriporiopsis subvermispora
B]
Length = 1213
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 154/284 (54%), Gaps = 50/284 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF N TLVL IGET+EEV +GF + PTL +G ++++QV+P GIRH+
Sbjct: 485 YDSYIILSFVNGTLVLCIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIRHV-- 542
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++DK+ VN+ ++ QG K IV
Sbjct: 543 ------LADKR-----------VNEWRVP---QG-------------------KTIVCAT 563
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N+RQ+V+AL L+YFE+ + G L+E + M S VL ++++ P G Q + +LAV
Sbjct: 564 TNKRQVVVALSSAELVYFELDLD-GQLNEYQDRKAMGSTVLALSIAEVPEGRQRTPYLAV 622
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D TVR+ISL P+ L +LQ L ++ + +M + + + ++
Sbjct: 623 GCEDQTVRIISLDPESTLDTISLQALTAPPSAICIADMLDAGINKTQQ--------TTFV 674
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
+GLQNG LLR V+D +G L+D R R+LG+RP+KL ++ Q N
Sbjct: 675 NIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLIRVLVQRN 718
>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
Length = 1188
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 145/287 (50%), Gaps = 62/287 (21%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FDAYIV+ IGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 474 QFDAYIVL----------IGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 523
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 524 A-----------------------DQR------------------VNEWPAPQHRSIVAA 542
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E QM V C++L P G S FLA
Sbjct: 543 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLA 601
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+TVR++SL P L+ K++Q L +L ++ M D TS LY
Sbjct: 602 VGCDDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSM--IDSTSGG--------STLY 651
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++GL +G LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 652 LHIGLYSGIYLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 698
>gi|308805058|ref|XP_003079841.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
gi|116058298|emb|CAL53487.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
Length = 1166
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 154/288 (53%), Gaps = 54/288 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D YIVVSF NATLVL+IG+TV EVS SG GTT TL M D+S++QV+ G+RHI
Sbjct: 468 QYDGYIVVSFLNATLVLAIGDTVTEVSDSGILGTTMTLQVCLMNDDSLLQVHAGGLRHIK 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A DK+ +++ + +K+I +C
Sbjct: 528 A-------------DKR----------------------------INEWRTPGRKQISKC 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N +Q+VIAL GG +IYFE+ +++ E ++ ++ C+ ++ P G SRFLA
Sbjct: 547 TCNSKQVVIALTGGEVIYFELDSAGQLIE--VEKLETNGDIACVDIAPVPEGALRSRFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTL-GNL 239
+G D TVR++SL DCL+ +Q L S ++I + AG +L G+L
Sbjct: 605 MGSYDGTVRVMSLNSDDCLQTLAVQALKGSTPSSLLIL----------QTAGTESLQGSL 654
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L VG+ NG L+R +DQ SG LSD R+R+LG+R KL + +G A
Sbjct: 655 LLNVGMANGVLMRATLDQVSGQLSDMRVRFLGTRAPKLVRTSVRGESA 702
>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1217
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 142/284 (50%), Gaps = 50/284 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YIV+SF N TLVLSIGET+EEV+ +GF + PTL +G+ ++QV+P G+RHI
Sbjct: 488 EYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVHPYGLRHIR 547
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A + V + + IV
Sbjct: 548 AADR-----------------------------------------VDEWPAPPGQTIVAA 566
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+VIAL L+YFE+ PE G L E E + C+ ++ P G + + FLA
Sbjct: 567 TTNRRQVVIALSTAELVYFELDPE-GSLSEYQEKKALPGNATCVTIAEVPEGRRRTSFLA 625
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG + TV +ISL P L +LQ L S+ + E+ TS D+ ++
Sbjct: 626 VGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSICLAEIFD---TSIDK-----NRATMF 677
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L +GL NG LLR VVD G LSD R+R+LG++P KL + QG
Sbjct: 678 LNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRANVQG 721
>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 147/284 (51%), Gaps = 54/284 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFD YI++ F NATLVL+IGET+ EV+ +G +PT+ + N ++Q++P GIRHI
Sbjct: 483 EFDRYIILGFLNATLVLAIGETIVEVADTGLLTNSPTIAIQQLDSNGLLQIHPTGIRHIH 542
Query: 61 AKN--TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
T WKV GR KIV
Sbjct: 543 LDGAITEWKVPP-------------------------GR------------------KIV 559
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
N+RQ+VI L GG LIYFE+ + G L+E E +M + + ++LS G Q + F
Sbjct: 560 VSTSNRRQVVIGLSGGELIYFELDLD-GQLNEYQEQKEMGATITSLSLSEVSKGRQRTPF 618
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
LA+GL + TV++ISL P L+ +LQ L + S+ + E+ S + E
Sbjct: 619 LAIGLENLTVQIISLDPNSVLETISLQALTAVPTSICIAELLDSSIDKNSE--------T 670
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRC 282
L++ +GL NG LLR V+D +G L+D R R+LGSRPVKL +++
Sbjct: 671 LFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKV 714
>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1213
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 147/284 (51%), Gaps = 54/284 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFD YI++ F NATLVL+IGET+ EV+ +G +PT+ + N ++Q++P GIRHI
Sbjct: 483 EFDRYIILGFLNATLVLAIGETIVEVADTGLLTNSPTIAIQQLDSNGLLQIHPTGIRHIH 542
Query: 61 AKN--TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
T WKV GR KIV
Sbjct: 543 LDGAITEWKVPP-------------------------GR------------------KIV 559
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
N+RQ+VI L GG LIYFE+ + G L+E E +M + + ++LS G Q + F
Sbjct: 560 VSTSNRRQVVIGLSGGELIYFELDLD-GQLNEYQEQKEMGATITSLSLSEVSKGRQRTPF 618
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
LA+GL + TV++ISL P L+ +LQ L + S+ + E+ S + E
Sbjct: 619 LAIGLENLTVQIISLDPNSVLETISLQALTAVPTSICIAELLDSSIDKNSE--------T 670
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRC 282
L++ +GL NG LLR V+D +G L+D R R+LGSRPVKL +++
Sbjct: 671 LFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLRVKV 714
>gi|157141630|ref|XP_001647735.1| spliceosomal protein sap [Aedes aegypti]
gi|108867854|gb|EAT32403.1| AAEL015441-PA, partial [Aedes aegypti]
Length = 645
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 105/143 (73%), Gaps = 3/143 (2%)
Query: 145 TGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNL 204
TG L+E +E +M S+V+CMAL + P+GEQ S FLAVGLADNTVR+ISL P DCL +++
Sbjct: 1 TGQLNEYTERKKMPSDVMCMALGSVPAGEQRSWFLAVGLADNTVRVISLDPSDCLSPRSM 60
Query: 205 QGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSD 264
Q LP AESL ++EMG D ++E + G +YL +GL NG LLR V+D SGDL+D
Sbjct: 61 QALPSAAESLCIVEMGTGD---TNEEGVASSAGCIYLNIGLTNGVLLRTVLDPVSGDLAD 117
Query: 265 NRMRYLGSRPVKLFKIRCQGNEA 287
R RYLGSRPVKLF+I+ QG+EA
Sbjct: 118 TRTRYLGSRPVKLFRIKMQGSEA 140
>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
Length = 650
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 107/147 (72%), Gaps = 3/147 (2%)
Query: 141 MHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200
M P +G L+E +E +M ++V+CM+L+N P GEQ SRFLAVGL DNTVR+ISL P DCL+
Sbjct: 1 MDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQ 59
Query: 201 QKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG 260
++Q LP ESL ++EMG ++ DE ++G LYL +GLQNG LLR V+D +G
Sbjct: 60 PLSMQALPAQPESLCIVEMGGTE--KQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTG 117
Query: 261 DLSDNRMRYLGSRPVKLFKIRCQGNEA 287
DLSD R RYLGSRPVKLF++R QG EA
Sbjct: 118 DLSDTRTRYLGSRPVKLFRVRMQGQEA 144
>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM
1558]
Length = 1214
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 146/287 (50%), Gaps = 50/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFD+YIV+SF N TLVLSIGET+EEV+ +GF + PTL +GD ++QV+P G+RHI
Sbjct: 485 EFDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGDAGLLQVHPYGLRHIR 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A + R+ + P S I
Sbjct: 545 AAD---------------------------------RVDEWACPPGS--------AITAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+VIAL L+YFE+ PE G L E + + C++++ P G + + FLA
Sbjct: 564 TTNKRQVVIALSTAELVYFELDPE-GSLSEYQDKKSLPGNATCVSIAEVPEGRRRTPFLA 622
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG + TV +ISL P+ L +LQ L S+ + E+ TS D+ ++
Sbjct: 623 VGCDNQTVHVISLEPESTLTTLSLQALTAPPASICLAEIFD---TSIDK-----NRATMF 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR VVD G LSD R+R+LG++P KL + G+ +
Sbjct: 675 LNIGLMNGVLLRTVVDPVEGSLSDTRLRFLGAKPPKLVRSSIHGSPS 721
>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
Length = 1221
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 151/287 (52%), Gaps = 45/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YI++SF N TLVLSIGET+EEV SGF ++PTL +G+++++QV+P GIRHI
Sbjct: 486 EYDSYIILSFLNGTLVLSIGETIEEVGDSGFLTSSPTLAVQQLGEDALLQVHPYGIRHI- 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+V VN+ +L G + IV
Sbjct: 545 ------------------LVDKQVNE-WATPSLPNGV----------------QTTIVAI 569
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ +AL L+YFE+ + G L+E + + VL M++++ P G Q + +LA
Sbjct: 570 CTNERQVAVALSSNELVYFELDMD-GQLNEYQDRKATGATVLTMSMADCPEGRQRTPYLA 628
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
G D+TVR+ISL P L ++Q L A S+ + EM D T A +
Sbjct: 629 AGCDDSTVRIISLEPASTLASISIQALTAPASSICVAEM--KDATVDRNQA------TTF 680
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +GL NG LLR V+D +G L+D R R+LGS+ V+L + + G A
Sbjct: 681 VNIGLSNGVLLRTVLDAMTGQLTDTRTRFLGSKAVRLIRTKVHGQSA 727
>gi|301632350|ref|XP_002945249.1| PREDICTED: splicing factor 3B subunit 3-like [Xenopus (Silurana)
tropicalis]
Length = 196
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 107/147 (72%), Gaps = 3/147 (2%)
Query: 141 MHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200
M P +G L+E +E +M ++V+CM+L+N P GEQ SRFLAVGL DNTVR+ISL P DCL+
Sbjct: 1 MDP-SGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQ 59
Query: 201 QKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG 260
++Q LP E+L ++EMG ++ DE ++G LYL +GLQNG LLR V+D +G
Sbjct: 60 PLSMQALPAQPEALCIVEMGGAE--RQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTG 117
Query: 261 DLSDNRMRYLGSRPVKLFKIRCQGNEA 287
DLSD R RYLGSRPVKLF++R QG EA
Sbjct: 118 DLSDTRTRYLGSRPVKLFRVRMQGQEA 144
>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
Length = 1197
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 152/286 (53%), Gaps = 47/286 (16%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D YIVVSF +ATLVL +GETVEEV+ SGF +L + + D+S +Q++ +GIRH+
Sbjct: 463 YDKYIVVSFEDATLVLEVGETVEEVAQSGFLRDHGSLLVALLEDDSKLQIHTNGIRHVP- 521
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ PV++ K KK I CA
Sbjct: 522 ----------------------------------------KFQPVTEWKAPGKKVIEHCA 541
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N RQ+VI+L GG +IYFE+ ++G L E + + + EV + L P G Q +F+AV
Sbjct: 542 ANSRQVVISLAGGEIIYFELG-QSGELAEKGK-LDLGFEVCSLDLGEVPEGRQRFQFMAV 599
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G DNTVR++SL P + +QK+ L +L + ++ ++P++ D L +L
Sbjct: 600 GSWDNTVRILSLDPNELFRQKSTLALTSHPHTLCLAQL-QNEPSTPDSEHSSQAL---FL 655
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GL NG L + ++D + L+D+R R+LG+ PVKLF++ +G +
Sbjct: 656 SIGLDNGVLQQSLIDPITATLADSRSRFLGTNPVKLFRVAVEGKRS 701
>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
Length = 1212
Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats.
Identities = 104/283 (36%), Positives = 145/283 (51%), Gaps = 58/283 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D YIVVSF+NATLVLSIGETVEEV+ SGF T PTL + + DN+++QV+ +GIRH+
Sbjct: 478 YDKYIVVSFTNATLVLSIGETVEEVTDSGFLATAPTLDVALLADNALLQVHGEGIRHVRG 537
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++S+ K +K I + A N+RQ+ AL GG +IYFE+
Sbjct: 538 D---LRISEWKTPGRKAIEKAAANERQVAAALAGGEVIYFELDA---------------- 578
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
+G L E T ++ EV C+ + P+G + FLA+
Sbjct: 579 -----------------------SGALAELG-TKELGVEVACLDVGVVPAGRARAPFLAL 614
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G D ++RL+SLAP + L Q L AES+ E + D G L +
Sbjct: 615 GGWDGSLRLLSLAPDELLVQVATMQLGARAESVRFCE-------TPD--------GRLGV 659
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
GL NG L R VD ++G L D R R+LGSR V+LF++ G
Sbjct: 660 AAGLANGVLQRAAVDASTGQLGDARARFLGSRAVRLFRVDVGG 702
>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
yFS275]
Length = 1166
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 143/286 (50%), Gaps = 53/286 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D Y+V+SF+N TLVLSIGETVEEV SG + TL +G +S+VQ++ GIR I A
Sbjct: 481 YDKYMVLSFTNGTLVLSIGETVEEVLDSGLLSSVSTLNVRQLGRSSVVQIHSKGIRCISA 540
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
KE V++ K I A
Sbjct: 541 N---------KE--------------------------------VTEWKTPADTVITNSA 559
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
+N++QIV++L L YFEM E G L+E E + S V +AL P G + S FL +
Sbjct: 560 INEQQIVVSLSNDELAYFEMDDEYGQLNEYQERKLLTSPVTALALGPVPQGSKRSNFLCL 619
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
D+TVR++SL P L+ ++Q L A SL M+ M E G T LYL
Sbjct: 620 ASEDSTVRIVSLDPYTTLENLSVQALSAPASSLCMVNM---------EVTGYET---LYL 667
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++GL NG LR VVD TSG L D R R+LG RP++L I +G ++
Sbjct: 668 HIGLSNGVYLRTVVDVTSGQLIDTRTRFLGPRPIRLSPIIVRGKQS 713
>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
Full=Pre-mRNA-processing protein 12; AltName:
Full=Spliceosome-associated protein 130
gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
pombe]
Length = 1206
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 142/283 (50%), Gaps = 59/283 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI++SF+N TLVLSIGETVEE+S SGF + TL MG +S+VQ++P GIR+I A
Sbjct: 495 YDSYIILSFTNGTLVLSIGETVEEISDSGFLSSVSTLNARQMGRDSLVQIHPKGIRYIRA 554
Query: 62 KNTT--WKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
T WK+ +Y +V+
Sbjct: 555 NKQTSEWKLPQD---------------------------VY----------------VVQ 571
Query: 120 CAVNQRQIVIALQGGRLIYFEMHP--ETGILDECSETIQMESEVLCMALSNAPSGEQMSR 177
A+N QIV+AL G L+YFEM E G L+E E + + V +AL G + S
Sbjct: 572 SAINDMQIVVALSNGELVYFEMSDDVEGGQLNEYQERKTLTANVTSLALGPVQEGSRRSN 631
Query: 178 FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
F+ + D TVR++SL L+ ++Q L A SL +I M + +
Sbjct: 632 FMCLACDDATVRVLSLDLYTTLENLSVQALSSPANSLCIIPMNVNG------------VS 679
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
LYL++GL NG LR V+D TSG L D R R+LG R VK++ I
Sbjct: 680 TLYLHIGLMNGVYLRTVIDVTSGQLLDTRTRFLGPRAVKIYPI 722
>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
Length = 1233
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 148/286 (51%), Gaps = 49/286 (17%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA- 61
D YIVVSF +T VLS+GET++E SG +T TL +MG++SI+QV+P G R I +
Sbjct: 475 DKYIVVSFVGSTSVLSVGETIQENHESGILESTTTLLIGSMGEDSILQVFPTGFRFIRSD 534
Query: 62 -KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ W+ GR K IVR
Sbjct: 535 MRTNEWRAP--------------------------GR-----------------KTIVRA 551
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
NQ Q+VIAL GG +IYFE+ G+ + + + ++ C+ +S P G M+RFLA
Sbjct: 552 TCNQNQLVIALSGGEVIYFELDQSGGLTEIIKKDFR--RDIACIEISPIPKGRSMARFLA 609
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDL-AESLVMIEMGASDPTSSDEPAGPVTLG-N 238
+ + VRL+SL +CL Q ++ + ESL ++EM ++ + +G +
Sbjct: 610 ISDWEGPVRLLSLDRDNCLGQISMLDTDKVYIESLSIVEMQVNEAGVDNFKVSSQNMGGS 669
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L+L+VGL+NG + R +D SG+LSD R R LG RPVKLFKI+ +G
Sbjct: 670 LFLFVGLKNGVIKRATLDNYSGELSDIRTRLLGRRPVKLFKIKVRG 715
>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
Length = 1256
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 148/290 (51%), Gaps = 62/290 (21%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D YIV+SF+NAT+VL + ++VEEV SGF T+ TL M +N I+QVY G+R
Sbjct: 478 DYDRYIVLSFTNATMVLEVQDSVEEVENSGFLATSSTLDVKLMANNKILQVYSHGLR--- 534
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ ++G P + + KK+I +
Sbjct: 535 ------------------------------VIMKG--------QPPQEWRAPGKKQIEKA 556
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMES-------EVLCMALSNAPSGE 173
N+RQ+V+AL GG +I+FE LDE + IQ E+ C+ + P
Sbjct: 557 CANERQVVLALAGGEIIFFE-------LDEAMQNIQEVGTKQLGGVEIACLEMGEVPKDR 609
Query: 174 QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
+ FLAVG + V+++ L+P++ L+Q + LP AESL + M A E A
Sbjct: 610 VRAPFLAVGDWNGNVKILGLSPENLLEQVAMINLPHPAESLCLAHMAA-------EQAAG 662
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
+ L+LY+GL +G R+ VD T+G LSD R R+LGS+PVKLF+I+ Q
Sbjct: 663 GSNEQLFLYIGLASGVCQRVAVDATAGTLSDPRQRFLGSKPVKLFRIQVQ 712
>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
Length = 635
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 97/131 (74%), Gaps = 2/131 (1%)
Query: 157 MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVM 216
M ++V+CM+L+N P GEQ SRFLAVGL DNTVR+ISL P DCL+ ++Q LP ESL +
Sbjct: 1 MSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCI 60
Query: 217 IEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVK 276
+EMG ++ DE ++G LYL +GLQNG LLR V+D +GDLSD R RYLGSRPVK
Sbjct: 61 VEMGGTE--KQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVK 118
Query: 277 LFKIRCQGNEA 287
LF++R QG EA
Sbjct: 119 LFRVRMQGQEA 129
>gi|17861814|gb|AAL39384.1| GM01240p [Drosophila melanogaster]
gi|220943184|gb|ACL84135.1| CG13900-PB [synthetic construct]
Length = 688
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 7/151 (4%)
Query: 144 ETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKN 203
+TG L+E +E +M +E++CMAL P GEQ S FLAVGLADNTVR++SL P +CL +
Sbjct: 31 QTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVGLADNTVRILSLDPNNCLTPCS 90
Query: 204 LQGLPDLAESLVMIEMGASDPTS-----SDEPA--GPVTLGNLYLYVGLQNGALLRMVVD 256
+Q LP AESL ++EMG ++ T+ D PA G +YL +GL NG LLR V+D
Sbjct: 91 MQALPSPAESLCLVEMGHTESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLD 150
Query: 257 QTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
SGDL+D R RYLGSRPVKLF+I+ QG+EA
Sbjct: 151 PVSGDLADTRTRYLGSRPVKLFRIKMQGSEA 181
>gi|164656549|ref|XP_001729402.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
gi|159103293|gb|EDP42188.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
Length = 1207
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 149/287 (51%), Gaps = 45/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D YIV+SF N TLVLSIGET+EEV SGF T TL +G ++++QV+P GIRHI
Sbjct: 484 QYDGYIVLSFVNGTLVLSIGETIEEVEDSGFLTTERTLAVQQLGTDALLQVHPRGIRHIL 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ K+ ++ C ++ +IV
Sbjct: 544 SN---------KQVNEWTTPSC---------------------------QDGSPTQIVAA 567
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+V+AL ++YFE+ + G L+E E +E++++ +++S P G Q + ++A
Sbjct: 568 TTNERQVVLALDSQEIVYFELDMD-GQLNEFQERRDIEADIVALSISACPEGSQRTPYVA 626
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+ AD TVR++SL P L +LQ L S+ + EM + ++
Sbjct: 627 IACADQTVRIVSLDPDSTLAPMSLQALTAPPSSISVCEMLDASLDRHHL--------TMF 678
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +GL NG +R V+D ++G L+D R R+LG RPV+L + + G+ A
Sbjct: 679 VCIGLANGVYIRTVLDPSTGQLTDTRTRFLGGRPVRLVRTQVHGDTA 725
>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1216
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 143/287 (49%), Gaps = 50/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YIV+SF N TLVLSIGET+EEV+ +GF + PTL +G ++QV+P G+RHI
Sbjct: 487 EYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGSAGLLQVHPAGLRHIR 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A + V + IV
Sbjct: 547 AADR-----------------------------------------VDEWNAPAGTTIVSA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL L+YFE+ E G L+E E + C+++++ P G + + +LA
Sbjct: 566 TTNKNQVVIALSTQELVYFELD-EEGSLNEYQERKSLPGNATCVSIADVPEGRRRTPYLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG + TV +ISL P + L+ +LQ L + + E+ TS D+ ++
Sbjct: 625 VGCDNQTVHIISLEPDNTLETLSLQALTAPPSDICLAEIFD---TSIDK-----NRATMF 676
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR VVD G LSD R+R+LGS+P ++ + G+ A
Sbjct: 677 LTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRIVRSAVHGSPA 723
>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 1216
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 143/287 (49%), Gaps = 50/287 (17%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D+YIV+SF N TLVLSIGET+EEV+ +GF + PTL +G ++QV+P G+RHI
Sbjct: 487 EYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGSAGLLQVHPAGLRHIR 546
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A + V + IV
Sbjct: 547 AADR-----------------------------------------VDEWNAPAGTTIVSA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL L+YFE+ E G L+E E + C+++++ P G + + +LA
Sbjct: 566 TTNKNQVVIALSTQELVYFELD-EEGSLNEYQERKSLPGNATCVSIADVPEGRRRTPYLA 624
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG + TV +ISL P + L+ +LQ L + + E+ TS D+ ++
Sbjct: 625 VGCDNQTVHIISLEPDNTLETLSLQALTAPPSDICLAEIFD---TSIDK-----NRATMF 676
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L +GL NG LLR VVD G LSD R+R+LGS+P ++ + G+ A
Sbjct: 677 LTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRIVRSAVHGSPA 723
>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
Length = 1205
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 53/288 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH-I 59
+D +V+SF NAT+VLSIGE++EEV SGF + PTL +G+N ++QV+ GIRH +
Sbjct: 478 HYDNLLVMSFQNATIVLSIGESMEEVKDSGFLTSMPTLAVQQIGENGLIQVHTHGIRHLV 537
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
++ WKV QG + IV
Sbjct: 538 DSQVNEWKVP------------------------QG-------------------QTIVA 554
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N+RQ+V+AL ++YFE+ E G L+E + M S VL + L P G +L
Sbjct: 555 ANTNRRQVVVALSSAEIVYFELDQE-GQLNEYQDMKAMGSTVLALGLGEVPEGRLRFPYL 613
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
AVG D TVR++SL P L+ +LQ L S+ + M + ++
Sbjct: 614 AVGCEDQTVRVMSLDPDSTLETISLQALTAPPSSICIAYMLDASINKVQR--------SM 665
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++ +GL NG LLR V+D T+G L+D R R+LG++PV+L +++ +G +A
Sbjct: 666 FVNIGLANGVLLRTVLDGTNGQLTDTRTRFLGTKPVRLLRVKLKGEDA 713
>gi|134106833|ref|XP_777958.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260658|gb|EAL23311.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1218
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 136/278 (48%), Gaps = 50/278 (17%)
Query: 7 VVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTW 66
V+SF N TLVLSIGET+EEV+ +GF + PTL +G+ ++QV+P G+RHI A +
Sbjct: 495 VLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVHPYGLRHIRAADR-- 552
Query: 67 KVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQ 126
V + + IV N+RQ
Sbjct: 553 ---------------------------------------VDEWPAPPGQTIVAATTNRRQ 573
Query: 127 IVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADN 186
+VIAL L+YFE+ PE G L E E + C+ ++ P G + + FLAVG +
Sbjct: 574 VVIALSTAELVYFELDPE-GSLSEYQEKKALPGNATCVTIAEVPEGRRRTSFLAVGCDNQ 632
Query: 187 TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQ 246
TV +ISL P L +LQ L S+ + E+ TS D+ ++L +GL
Sbjct: 633 TVSIISLEPDSTLDTLSLQALTAPPTSICLAEIFD---TSIDK-----NRATMFLNIGLM 684
Query: 247 NGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
NG LLR VVD G LSD R+R+LG++P KL + QG
Sbjct: 685 NGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRANVQG 722
>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
Length = 1194
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 144/288 (50%), Gaps = 46/288 (15%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDN--SIVQVYPDGIRHIG 60
D YIVVSF +TLVL +GETVEEV SG TT T+ +MG N SIVQ++ GIRHI
Sbjct: 477 DRYIVVSFVGSTLVLGVGETVEEVQDSGILSTTTTILIRSMGANLDSIVQIFAQGIRHIN 536
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A+ VS+ + +K I
Sbjct: 537 AERR-----------------------------------------VSEWRAPGRKTISIA 555
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A NQ+Q++I + G +IYFE+ P G L E + M ++ C+ + P G MSRF+A
Sbjct: 556 AANQQQVIICIGGSEIIYFELDP-AGNLTEVFKK-DMRKDINCIEFAPIPRGRTMSRFVA 613
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLP-DLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+ D VR++SL + L Q ++ E L + E+ +P + G L
Sbjct: 614 ISDYDGPVRILSLERDNMLNQVSMVDTDRQQVEQLCVAELMVHEPGVDQQIVNTQRQGTL 673
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+L++GL+NG L R V+D +G++SD R R LG RP+K F+++ +G+ A
Sbjct: 674 FLHIGLKNGVLKRAVLDGLTGEISDMRTRILGRRPIKFFRVKIKGSPA 721
>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
Length = 1174
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 145/285 (50%), Gaps = 52/285 (18%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
YIV+S+ N TLVL IGE VE+V +G GT T+ + D+S +Q+ +G RHI
Sbjct: 463 YIVISYINKTLVLKIGEKVEQVHDTGLEGTKQTIHVGTLIDDSQIQILTNGYRHIR---- 518
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
+K +D + G K+++ N+
Sbjct: 519 ----KNKPPTD---------------YIIDG--------------------KVIKGVSNE 539
Query: 125 RQIVIALQGGRLIYFEMHPET--GILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
+Q+ AL GG + YFE+ + G L E ++ QM++E+ + L G Q +FL V
Sbjct: 540 KQVAFALAGGDVYYFELDTTSFQGNLIEITKD-QMDNEIKALELGPIEEGRQRCKFLCVA 598
Query: 183 LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLY 242
L+D T+RL+SL P+ C ++ +Q LP AESL M+EM +S++ L+L+
Sbjct: 599 LSDQTIRLLSLEPESCFERGAMQALPSEAESLCMMEM------ASEQEGQQSFTKQLFLF 652
Query: 243 VGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GL NG L+R VDQ SG LSD R RYLG++PVK +I +A
Sbjct: 653 IGLNNGLLMRTSVDQLSGGLSDTRTRYLGTKPVKCLRINANQQQA 697
>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
Length = 1178
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 145/285 (50%), Gaps = 52/285 (18%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
YIV+S+ N TLVL IGE VE+V +G GT T+ + D+S +Q+ +G RHI
Sbjct: 467 YIVISYINKTLVLKIGEKVEQVHDTGLEGTKQTIHVGTLIDDSQIQILTNGYRHIR---- 522
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
+K +D + G K+++ N+
Sbjct: 523 ----KNKPPTD---------------YIIDG--------------------KVIKGVSNE 543
Query: 125 RQIVIALQGGRLIYFEMHPET--GILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
+Q+ AL GG + YFE+ + G L E ++ QM++E+ + L G Q +FL V
Sbjct: 544 KQVAFALAGGDVYYFELDTTSVSGNLIEITKD-QMDNEIKALELGPIEEGRQRCKFLCVA 602
Query: 183 LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLY 242
L+D T+RL+SL P+ C ++ +Q LP AESL M+EM +S++ L+L+
Sbjct: 603 LSDQTIRLLSLEPESCFERGAMQALPSEAESLCMMEM------ASEQEGQQSFTKQLFLF 656
Query: 243 VGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GL NG L+R VDQ SG LSD R RYLG++PVK +I +A
Sbjct: 657 IGLNNGLLMRTSVDQLSGGLSDTRTRYLGTKPVKCLRITANQQQA 701
>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
Length = 1208
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 146/291 (50%), Gaps = 60/291 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+ IV+SF N TLVL IGE++EEVS +G + TL +G++S++QV+P GIRHI
Sbjct: 487 YDSLIVLSFVNGTLVLGIGESIEEVSDTGLATSVSTLSVDQLGEDSMIQVFPQGIRHI-- 544
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++DK+ V++ K I
Sbjct: 545 ------LNDKR---------------------------------VNEWKSPSDTYITAST 565
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N RQ+ +AL G L+YFEM E G L+E E MES V M++ P G Q +LA+
Sbjct: 566 TNSRQVCVALSNGELVYFEMDNE-GQLNEFQERKSMESTVTTMSIGEVPQGRQRCPYLAL 624
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIE-----MGASDPTSSDEPAGPVTL 236
G D T+R++SL P++ L+ ++Q + S+ + E + +PT
Sbjct: 625 GCDDQTIRIVSLDPENTLEVVSVQAVTAQPSSICVAEILDKSLDKYNPT----------- 673
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L++ +GL NG LLR V+D +G L+D R R+LG++PV L ++ +A
Sbjct: 674 --LFVNIGLANGVLLRTVLDTVNGSLADTRTRFLGAKPVVLRRVTVDKQQA 722
>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
Length = 1644
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 139/289 (48%), Gaps = 57/289 (19%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAK 62
D YIVVSF +ATLVL IG+TVEE++ SG +L + + DNS++QV+ +G RHI
Sbjct: 914 DKYIVVSFEDATLVLEIGDTVEEITDSGLLRDHSSLLVALLEDNSMLQVHQNGFRHIR-- 971
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
+ PV++ K KK I RCA
Sbjct: 972 ---------------------------------------KSQPVTEWKAPGKKIIERCAA 992
Query: 123 NQRQIVIALQGGRLIYFEMHP----ETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
N RQ+V++L GG +IYFE+ E G LD + E+ + + P G Q F
Sbjct: 993 NARQLVVSLAGGEVIYFELGVNELMEKGKLD-------LGFEITSLDVGQVPQGRQRFPF 1045
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
LAVG DN+VR++SL P D +QK+ L +L + SD T
Sbjct: 1046 LAVGSWDNSVRVLSLDPNDLFRQKSTLALTSHPHTLCFSNLQTESAAGSDH-----TTQC 1100
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L +GL NG + +D + L+D+ R+LG++PVKLF + QG A
Sbjct: 1101 LFLNIGLHNGVFQQTRMDSITAALADSSARFLGTKPVKLFCVTIQGKRA 1149
>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
Length = 1256
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 157/305 (51%), Gaps = 63/305 (20%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAK 62
D YIVVSF T VLS+G+T++E SG TT TL +MGD++I+QV+P G RHI
Sbjct: 488 DKYIVVSFVGTTSVLSVGDTIQENHESGILETTTTLLVKSMGDDAIIQVFPTGFRHI--- 544
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
+SD + +++ + +K IVR +
Sbjct: 545 ----------KSDLR----------------------------INEWRAPGRKTIVRASA 566
Query: 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
NQ Q+ IAL GG +IYFE+ + +++ + + ++ C+ +S P G M+RF+AV
Sbjct: 567 NQSQLAIALSGGEIIYFELDQASNLIEIIKK--DLRRDIACIEISPIPKGRNMARFIAVS 624
Query: 183 LADNTVRLISLAPQDCLKQKNLQGLPDL-AESLVMIEMGASD------------------ 223
+ +R++SL +CL Q ++ + ESL +IEM ++
Sbjct: 625 DWEGPIRVLSLDRDNCLGQVSMLDTDKVYIESLSIIEMQLNEMGIETKKSQSQTGQTTTT 684
Query: 224 -PTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRC 282
++S + + G+L+L+VGL+NG + R +D +G+LSD R R LG +PVKLFK++
Sbjct: 685 TTSTSSASSSVTSGGSLFLFVGLKNGVVKRATLDSVTGELSDIRTRLLGRKPVKLFKVKV 744
Query: 283 QGNEA 287
+G+ A
Sbjct: 745 RGSNA 749
>gi|336469942|gb|EGO58104.1| pre-mRNA splicing factor RSE1 [Neurospora tetrasperma FGSC 2508]
Length = 1192
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 133/265 (50%), Gaps = 54/265 (20%)
Query: 19 IGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKK 78
IGETVEEVS SGF T PTL MG++ ++QV+P GIRHI
Sbjct: 489 IGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI------------------- 529
Query: 79 IVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIY 138
+QG V++ + IV N+ Q+VIAL G ++Y
Sbjct: 530 --------------VQGR---------VNEWPAPQHRSIVAATANENQVVIALSSGEIVY 566
Query: 139 FEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC 198
FEM + G L E E +M V +++ P G + S FLAVG D TVR++SL P
Sbjct: 567 FEMDSD-GSLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLAVGCDDCTVRILSLDPDST 625
Query: 199 LKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQT 258
L+ K++Q L +L ++ M S S+ LYL++GL +G LR V+D+
Sbjct: 626 LEMKSIQALTAAPSALSIMSMEDSFGGST-----------LYLHIGLHSGVYLRTVLDEV 674
Query: 259 SGDLSDNRMRYLGSRPVKLFKIRCQ 283
+G+L+D R ++LG +P KLF++ Q
Sbjct: 675 TGELTDTRQKFLGPKPTKLFQVSVQ 699
>gi|164429062|ref|XP_957282.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
gi|157072394|gb|EAA28046.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
Length = 1192
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 133/265 (50%), Gaps = 54/265 (20%)
Query: 19 IGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKK 78
IGETVEEVS SGF T PTL MG++ ++QV+P GIRHI
Sbjct: 489 IGETVEEVSDSGFLTTAPTLAVQQMGEDGLIQVHPKGIRHI------------------- 529
Query: 79 IVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIY 138
+QG V++ + IV N+ Q+VIAL G ++Y
Sbjct: 530 --------------VQGR---------VNEWPAPQHRSIVAATANENQVVIALSSGEIVY 566
Query: 139 FEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC 198
FEM + G L E E +M V +++ P G + S FLAVG D TVR++SL P
Sbjct: 567 FEMDSD-GSLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLAVGCDDCTVRILSLDPDST 625
Query: 199 LKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQT 258
L+ K++Q L +L ++ M S S+ LYL++GL +G LR V+D+
Sbjct: 626 LEMKSIQALTAAPSALSIMSMEDSFGGST-----------LYLHIGLHSGVYLRTVLDEV 674
Query: 259 SGDLSDNRMRYLGSRPVKLFKIRCQ 283
+G+L+D R ++LG +P +LF++ Q
Sbjct: 675 TGELTDTRQKFLGPKPTRLFQVSVQ 699
>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
Length = 1019
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 120/212 (56%), Gaps = 52/212 (24%)
Query: 50 QVYPDGIRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDK 109
QVYP+GIRHI A DK+ V++
Sbjct: 283 QVYPEGIRHIRA-------------DKR----------------------------VNEW 301
Query: 110 KESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNA 169
+ KK IV+CAVNQRQ+VIAL GG L+YFEM P TG L+E ++ +M ++++CM+L++
Sbjct: 302 RTPGKKAIVKCAVNQRQVVIALTGGELVYFEMDP-TGQLNEYTDRREMSADIICMSLASV 360
Query: 170 PSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDE 229
P GEQ SRFLAVGLADNTVR+ISL P DCL ++Q LP ESL ++EMG ++
Sbjct: 361 PVGEQRSRFLAVGLADNTVRIISLDPSDCLSPLSMQALPATPESLSIVEMGLAE------ 414
Query: 230 PAGPVTLGNLYLYVGLQNGALLRMVVDQTSGD 261
P + G LYL +GLQ + M V + G+
Sbjct: 415 -MDPSSQGVLYLNIGLQ---VSEMAVSELPGN 442
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 45/50 (90%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQ 50
+FDAYI+VSF NATLVLSIGETVEEV+ SGF GTTPTL C+ +GD+++VQ
Sbjct: 456 DFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCAQIGDDALVQ 505
>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
Length = 1143
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 143/287 (49%), Gaps = 70/287 (24%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P GIRHI
Sbjct: 449 EFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIR 508
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
++++ + K+ IV+ N+ Q+VIAL GG LIYFE+ E + V
Sbjct: 509 EDG---RINEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMERSRFLAVGS 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N +I+ + P D+C + + ++S +S+ P + FL
Sbjct: 566 YDNTIRIL-----------SLDP-----DDCMQILSVQS------VSSPP---ESLLFLE 600
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
V Q ++ G E GA P S L+
Sbjct: 601 V-------------------QASVGG-----------EDGADHPAS------------LF 618
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L GLQNG L R VVD +G LSD R R+LG R KLF + +G A
Sbjct: 619 LNAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVIVRGRRA 665
>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
Length = 934
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 132/271 (48%), Gaps = 85/271 (31%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFDAYIVVSF+NATLVLSIGETVEEVS SGF TTP+L S +GD+S++QV+P GIRHI
Sbjct: 328 EFDAYIVVSFANATLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHI- 386
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ GR +++ + K+ IV+
Sbjct: 387 --------------------------------REDGR--------INEWRTPGKRTIVKV 406
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+ Q+VIAL GG LIYFE+ +
Sbjct: 407 GSNRLQVVIALSGGELIYFEVD------------------------------------MT 430
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVTLGN 238
VG DNT+R++SL P DC++ ++Q + ESL+ +E+ AS +D PA +
Sbjct: 431 VGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASVGGEDGADHPA------S 484
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRY 269
L+L GLQNG L R VVD +G + Y
Sbjct: 485 LFLNAGLQNGVLFRTVVDMVTGHFLLTPLSY 515
>gi|396488712|ref|XP_003842924.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
gi|312219502|emb|CBX99445.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
Length = 1236
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 142/290 (48%), Gaps = 44/290 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D IV+ + TLVL IG+ VEE S +GF T TL G++ I+Q++P GIRHI
Sbjct: 482 ETDTLIVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHI- 540
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + +D + + ++D + + IV C
Sbjct: 541 -QGIQFPDNDANATHQS----------------------------LTDWQPPAHRTIVAC 571
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N RQ+ IAL G+++YFE + G L E I ++S + C+A+ + P G + FLA
Sbjct: 572 ATNNRQVAIALSSGQILYFECDSD-GSLAMAEEEIALDSTINCLAMPDVPEGSVRAFFLA 630
Query: 181 VGLADNTVRLISLAPQ---DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
VG +D TVR+ +L+P + L+ ++Q L L + M P +
Sbjct: 631 VGCSDQTVRIFNLSPDMEGNILRSISVQALTSPPSDLTINLMSDKSPRGYSQ-------- 682
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+L++GL++G +R V+D+ +GD+ D R R+LG P+K K+ G A
Sbjct: 683 --FLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTVAGEPA 730
>gi|281202530|gb|EFA76732.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
Length = 933
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 144/298 (48%), Gaps = 55/298 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D YIVVSF +TLVLS+GETVEEV SG TT ++ +G +SI+QV+P GIRHI
Sbjct: 304 IDKYIVVSFIGSTLVLSVGETVEEVVDSGILATTTSILVRPIGADSIIQVFPHGIRHIKG 363
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++++ + +K I N Q+VIAL GG +IYFE+ + E KK+ R
Sbjct: 364 DR---RINEWRAPGRKTISLATSNATQVVIALGGGEVIYFELDAAGNLSEVAKKEFRR-- 418
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
E+ + ++ G QM+RF+A+
Sbjct: 419 --------------------------------------EISALEIAPVRKGRQMARFVAI 440
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLA-ESLVMIEM--GASDPTSSDEPAGPVTLGN 238
G + VR++SL + L Q ++ + ESL+M EM G P + + +
Sbjct: 441 GDWEGPVRVLSLDKDNLLNQVSVLDTERMHIESLMMNEMTIGVEMPEGTASSSSAIAKQQ 500
Query: 239 ---------LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L VGL+NG + R VVD +G+LSD R R LG +PVK +++ + A
Sbjct: 501 QLQNQSNQVLFLNVGLKNGVMKRAVVDPITGELSDTRTRLLGRKPVKFSRVKLKSGNA 558
>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
Length = 1246
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 143/290 (49%), Gaps = 44/290 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D IV+ + TLVL IGE VEE S +GF T TL G++ I+QV+P GIRHI
Sbjct: 482 ETDTLIVLCLHSRTLVLKIGEDVEEASNTGFMADTNTLGVQQFGEDCIIQVHPKGIRHI- 540
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ I G + + +D + + IV C
Sbjct: 541 --------------------------QGIQFPEDGAVATHTSL---TDWQPPAHRTIVAC 571
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N RQ+ IAL G+++YFE + G L E I ++S + C+A+ + P G + F+A
Sbjct: 572 ATNNRQVAIALSSGQILYFECDAD-GSLAMAEEEIALDSTINCLAIPDVPEGSVRAFFMA 630
Query: 181 VGLADNTVRLISLAPQ---DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
VG +D TVR+ +L+P + L+ ++Q L L + M SD +S
Sbjct: 631 VGCSDQTVRIFNLSPDMEGNILRSISVQALTSPPSGLTINMM--SDKSSRGY-------- 680
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +L++GL++G +R V+D+ +GD+ D R R+LG P+K K+ G A
Sbjct: 681 SQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTVAGEPA 730
>gi|237837399|ref|XP_002367997.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
gi|211965661|gb|EEB00857.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
gi|221488748|gb|EEE26962.1| splicing factor 3B subunit, putative [Toxoplasma gondii GT1]
gi|221509241|gb|EEE34810.1| splicing factor 3B subunit, putative [Toxoplasma gondii VEG]
Length = 1233
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 138/290 (47%), Gaps = 50/290 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI-- 59
FD YI V+F ++LVL IG+TVEEV+ S F +L + M D+S +QV+ GIRHI
Sbjct: 468 FDGYIFVAFDGSSLVLQIGDTVEEVTDSAFLTNVSSLLVALMYDDSFIQVHETGIRHILK 527
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ W+ GGR +I
Sbjct: 528 SKRVNEWRAP-------------------------GGR------------------RIKA 544
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
A N+RQ+VI+L GG L+ FE+ +++ I +ES CM++ P G + FL
Sbjct: 545 AAANERQLVISLAGGELVLFEVDDAHTLVETARRNINVEST--CMSMQAIPKGRLRASFL 602
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLA--ESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG DN VR++SL L+Q + Q LP+ A ES+ + + S+D G
Sbjct: 603 AVGGLDNMVRILSLEKDRNLRQLSTQLLPNDATPESVCLATLTGLGANSTDAGKSQDN-G 661
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LYL+VGL G ++R VVD G L D R R+LG R V+ + QG A
Sbjct: 662 VLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPA 711
>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1247
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 44/283 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D IV+ + TLVL IG+ VEE S +GF T TL G++ I+Q++P GIRHI
Sbjct: 476 EADTLIVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQ 535
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+D ++ + HP + + IV C
Sbjct: 536 GIQFPNDDADATHAN------------------------LMDWHPPA------HRTIVAC 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N RQ+ IAL G+++YFE + G L E I ++S + C+A+ + P G + FLA
Sbjct: 566 ATNNRQVAIALSSGQILYFECDSD-GSLAMAEEEISLDSTINCLAMPDVPEGSVRAFFLA 624
Query: 181 VGLADNTVRLISLAPQ---DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
VG +D TVR+ +L+P + L+ ++Q L L + M P +
Sbjct: 625 VGCSDQTVRIFNLSPDMDGNILRSISVQALTSPPSDLTINFMKDRSPRGESQ-------- 676
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
+L++GL++G +R V+D+ +GD+ D R R+LG P+K K+
Sbjct: 677 --FLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKV 717
>gi|219110831|ref|XP_002177167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411702|gb|EEC51630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1303
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 148/294 (50%), Gaps = 56/294 (19%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSG-SGFYGTTPTLCCSAMG-DNSIVQVYPDGIRH 58
+ D +IVVSF++ATLVLS+GETVEEV SGF +PTL CSA+G D ++ QV+P G+RH
Sbjct: 541 KLDQFIVVSFADATLVLSVGETVEEVGKESGFLTNSPTLACSALGSDGALCQVHPVGVRH 600
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
I ++ + K C +R +
Sbjct: 601 I-------------QNGQAKQWHCPGLKR------------------------------I 617
Query: 119 RCA-VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSR 177
CA N+ Q+++AL GG +IYFE+ P +G L E S T +M ++V C+ + P G S
Sbjct: 618 ECASANESQVIVALAGGEIIYFELDPMSGNLME-SATREMGADVCCLDVGTIPKGRSRSL 676
Query: 178 FLAVGLADNTVRLISLAPQDC--LKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235
F VG D TVR+ISL P L Q++ L S+ + M A S+
Sbjct: 677 FAVVGCRDQTVRVISLEPDKTKILSQRSSTALKARPHSVALQMMNAGVANSN------AN 730
Query: 236 LGNLYLYVGLQNGALLRMVVDQTSGDL-SDNRMRYLGSRPVKLFKIRCQGNEAN 288
+ +L L +GL +G+ LR +D +G + + R+LG+RPV + +I + N A
Sbjct: 731 VDDLTLIIGLDDGSSLRASIDPITGSIGTSPTRRFLGARPVAVSRISLESNPAT 784
>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
Length = 1247
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 140/287 (48%), Gaps = 44/287 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D IV+ + TLVL IG+ VEE S +GF T TL G++ I+Q++P GIRHI
Sbjct: 476 EADTLIVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHI- 534
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + D + + + HP + + IV C
Sbjct: 535 -QGIQFPNDDAGATHANLM----------------------DWHPPA------HRTIVAC 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N RQ+ IAL G+++YFE + G L E I ++S + C+A+ + P G + FLA
Sbjct: 566 ATNNRQVAIALSSGQILYFECDSD-GSLAMAEEEISLDSTINCLAMPDVPEGSVRAFFLA 624
Query: 181 VGLADNTVRLISLAPQ---DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
VG +D TVR+ +L+P + L+ ++Q L L + M P +
Sbjct: 625 VGCSDQTVRIFNLSPDMDGNILRSISVQALTSPPSDLTINLMTDRSPRGYSQ-------- 676
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
+L++GL++G +R V+D+ +GD+ D R R+LG P+K K+ G
Sbjct: 677 --FLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTVAG 721
>gi|326511015|dbj|BAJ91855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 124/236 (52%), Gaps = 51/236 (21%)
Query: 45 DNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMH 104
++S++QV+P+GIRHI + GR
Sbjct: 1 EDSLMQVHPNGIRHI---------------------------------REDGR------- 20
Query: 105 PVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCM 164
V++ + KK I + N+ Q+VIAL GG LIYFEM TG L E E M +V C+
Sbjct: 21 -VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACL 77
Query: 165 ALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS-- 222
A++ P G Q SRFLAVG DNT+R++SL P DCL+ ++Q + ESL+ +E+ AS
Sbjct: 78 AIAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVG 137
Query: 223 DPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
+D PA NL+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 138 GEDGADYPA------NLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 187
>gi|451852814|gb|EMD66108.1| hypothetical protein COCSADRAFT_34693 [Cochliobolus sativus ND90Pr]
Length = 1235
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 44/290 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D IV+ + TLVL IG+ VEE S +GF T TL G++ I+Q++P GIRHI
Sbjct: 476 ETDTLIVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHI- 534
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + D + ++D + + IV C
Sbjct: 535 -QGIQFPNDDASATHAS----------------------------LTDWQPPAHRTIVAC 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N RQ+ IAL G+++YFE + G L E I +ES + C+A+ + P G + FLA
Sbjct: 566 ATNNRQVAIALSSGQILYFECDSD-GSLAMAEEEIVLESTINCLAMPDVPEGSVRAFFLA 624
Query: 181 VGLADNTVRLISLAPQ---DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
VG +D TVR+ +L+P + L+ ++Q L L + M +D +S
Sbjct: 625 VGCSDQTVRIYNLSPDMEGNILRSISVQALTSPPSDLTINLM--TDKSSRGY-------- 674
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +L++GL++G +R V+D+ +GD+ D R R+LG P+K K+ G A
Sbjct: 675 SQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTVAGEPA 724
>gi|342888540|gb|EGU87812.1| hypothetical protein FOXB_01669 [Fusarium oxysporum Fo5176]
Length = 1408
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 142/284 (50%), Gaps = 53/284 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FD+YI+++ S+ T+V+S+G+ VE+VS SGF T TL +GD+ IVQ++ GIRH+
Sbjct: 826 KFDSYIILTSSDGTVVMSVGDEVEQVSDSGFLTTVTTLAIQQIGDDGIVQIHSKGIRHLR 885
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +++ + IV
Sbjct: 886 AGQ------------------------------------------INEWPAPQHRSIVAV 903
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQI IAL G ++YFE+ + G L E ET + + V C++L P G S L
Sbjct: 904 TTNKRQIAIALSSGEIVYFEVDSD-GSLAEYDETKVISTTVTCLSLGPVPEGRLRSPLLV 962
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D TVR++ L P L+ +++ L + +L+++ M +SS L
Sbjct: 963 VGCEDCTVRILGLNPDSMLESNSIKTLTAVPSALIIMAMEHPLTSSS----------GLC 1012
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
L++GL +G LR +++ +G+LSD + R+LG + +KLF++ +G
Sbjct: 1013 LHIGLSSGVYLRTGMNEITGELSDTQTRFLGLKAIKLFQVTVKG 1056
>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
associated protein [Thalassiosira pseudonana CCMP1335]
Length = 1212
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 148/298 (49%), Gaps = 66/298 (22%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSG-SGFYGTTPTLCCSAM-------GDNSIVQVYP 53
+D YIVVSF++ATLVLS+GETVEE+ SGF T PTL CSA+ + IVQVYP
Sbjct: 458 YDRYIVVSFADATLVLSVGETVEEMGKESGFLTTEPTLACSALGNGGNGEQEGGIVQVYP 517
Query: 54 DGIRHIGAKNTT-WKVSDKKESDKKKIVRCA-VNQRQIVIALQGGRLIYFEMHPVSDKKE 111
G+RHI + + W V K+ + CA N+ QI+IAL GG LIYFE+ P+S
Sbjct: 518 GGVRHIQRGSVSQWHVPGIKK------IECASANESQILIALVGGELIYFELDPLS---- 567
Query: 112 SDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPS 171
G L E + T + ++V + + P
Sbjct: 568 ----------------------------------GNLMEAA-TKDVGADVCSLDVGAVPK 592
Query: 172 GEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPA 231
G+ S F AVG D+TVRL+SLAP L+QK+ L V + G
Sbjct: 593 GKSRSLFAAVGCRDSTVRLLSLAPGSLLEQKSSTTLGTTRPHSVALSNG----------V 642
Query: 232 GPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDN-RMRYLGSRPVKLFKIRCQGNEAN 288
G G + L VGL +G+ LR VD +G +S + R+LG+RPV + ++ +G+ +
Sbjct: 643 GSDGAGEITLSVGLDDGSALRAGVDPITGAMSTSPSRRFLGARPVAVSRVMIEGSPST 700
>gi|452002380|gb|EMD94838.1| hypothetical protein COCHEDRAFT_1128717 [Cochliobolus
heterostrophus C5]
Length = 1235
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 143/290 (49%), Gaps = 44/290 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E D IV+ + TLVL IG+ VEE S +GF T TL G++ I+Q++P GIRHI
Sbjct: 476 ETDTLIVLCLHSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHI- 534
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + D + ++D + + IV C
Sbjct: 535 -QGIQFPNDDASATHAS----------------------------LTDWQPPAHRTIVAC 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N RQ+ IAL G+++YFE + G L E I ++S + C+A+ + P G + FLA
Sbjct: 566 ATNNRQVAIALSSGQILYFECDSD-GSLAMAEEEIVLDSTINCLAMPDVPEGSVRAFFLA 624
Query: 181 VGLADNTVRLISLAPQ---DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
VG +D TVR+ +L+P + L+ ++Q L L + M +D +S
Sbjct: 625 VGCSDQTVRIYNLSPDMEGNILRSISVQALTSPPSDLTVNLM--TDKSSRGY-------- 674
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +L++GL++G +R V+D+ +GD+ D R R+LG P+K K+ G A
Sbjct: 675 SQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTVAGEPA 724
>gi|358060450|dbj|GAA93855.1| hypothetical protein E5Q_00501 [Mixia osmundae IAM 14324]
Length = 1153
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 143/281 (50%), Gaps = 53/281 (18%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YIV+S AT+VL+IGE++E+ S SG TLC +GD+SIVQV+P G + A
Sbjct: 428 YDSYIVLSAPAATIVLTIGESIEQASNSGLVENQRTLCVQQVGDDSIVQVHPAGFLRVRA 487
Query: 62 KNT--TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ W ++ ++ + V CA NQRQIV+A G +IY +R
Sbjct: 488 DGSKEVWPLAPERVN---LAVACA-NQRQIVLATTSGDIIY-----------------LR 526
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
C ++ G + F+ + G+ V M++ + +L
Sbjct: 527 CELD----------GEITVFDDRKQLGV------------SVTSMSIGELSEDRLQTDYL 564
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VG D TVR+ISL Q+CL+ ++Q L L S+ + E+ SS + P T N
Sbjct: 565 CVGCEDQTVRIISLQEQNCLETISIQALTALPSSICIAEI----LDSSVDKTRPTTFVN- 619
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
+GLQNG LLR V+D SG L+D R R+LG+RPVKL ++
Sbjct: 620 ---IGLQNGVLLRTVLDPMSGRLTDTRTRFLGTRPVKLRRL 657
>gi|114318675|gb|ABI63336.1| putative splicing factor 3b [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 102/167 (61%), Gaps = 10/167 (5%)
Query: 114 KKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGE 173
KK I + N+ Q+VIAL GG LIYFEM TG L E E M +V C+A++ P G
Sbjct: 4 KKTITKVGSNRLQVVIALSGGELIYFEMD-MTGQLMEV-EKQDMSGDVACLAIAPVPEGR 61
Query: 174 QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPA 231
Q SRFLAVG DNT+R++SL P DCL+ ++Q + ESL+ +E+ AS +D PA
Sbjct: 62 QRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPA 121
Query: 232 GPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLF 278
NL+L GLQNG L R VD +G LSD R R+LG RP KLF
Sbjct: 122 ------NLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLF 162
>gi|401407861|ref|XP_003883379.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
gi|325117796|emb|CBZ53347.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
Length = 1233
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 137/290 (47%), Gaps = 50/290 (17%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI-- 59
FD YI+V+F ++LVL IG+TVEEV+ S F +L + M D+S +QV+ GIRHI
Sbjct: 468 FDGYIIVAFEGSSLVLQIGDTVEEVTDSLFLTNVSSLLVALMYDDSFIQVHETGIRHILK 527
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ W+ GGR I K +D
Sbjct: 528 SKRVNEWRTP-------------------------GGRRI----------KAAD------ 546
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N+RQ+VI+L GG LI FE+ +++ I +E+ CM++ P G + FL
Sbjct: 547 --ANERQLVISLAGGELILFEVDESHTLVETARRNINVETT--CMSMQAIPKGRLRASFL 602
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLA--ESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG DN VR++SL L+Q Q LP+ A ES+ + + D G
Sbjct: 603 AVGGLDNMVRILSLEKDRNLRQLATQLLPNNATPESVCLATLTGLGAHGKDAGKSEDN-G 661
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LYL+VGL G ++R VVD G L D R R+LG R V+ + QG A
Sbjct: 662 VLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLGGRAVRFHAVTLQGQPA 711
>gi|300120114|emb|CBK19668.2| unnamed protein product [Blastocystis hominis]
Length = 1240
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 66/289 (22%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
++V+SF+NAT+VL++G++VE+V +GF TL + NS +QVYP G R I
Sbjct: 490 FMVISFNNATIVLAVGKSVEQVMDTGFKLDESTLATGVLEGNSFLQVYPGGFRQI----- 544
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
FE + ++ I A+N
Sbjct: 545 ------------------------------------FEDGHTKVWEPPSRRSITAAAMNL 568
Query: 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMES-----EVLCMALSNAPSGEQMSRFL 179
RQIV+AL G ++YFE LDE E ++ ES EV+C+ L + FL
Sbjct: 569 RQIVVALSNGEVLYFE-------LDERLEWVERESMNHREEVICLDLPALAPNSLRAPFL 621
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVM--IEMGASDPTSSDEPAGPVTLG 237
AVG D + R+ SLAP L++ ++Q L + +L + + MG +G +
Sbjct: 622 AVGYGDRSCRVYSLAPNSLLEELSMQALNAMPSNLTLDTMRMG----------SGSLARE 671
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNR-MRYLGSRPVKLFKIRCQGN 285
L L VG++NG L+R+ VD SG LS+ R R+LG RPV+LFKI GN
Sbjct: 672 TLLLTVGMENGILMRVEVDPVSGKLSNARSTRFLGPRPVRLFKILAGGN 720
>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
falciparum 3D7]
gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
falciparum 3D7]
Length = 1329
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 136/289 (47%), Gaps = 53/289 (18%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D YIVVSF TL+L IGE+VEEVS + TL + + DNS +QVY GIRHI
Sbjct: 501 EYDGYIVVSFEGNTLILEIGESVEEVSDTLLLNNVTTLHINILYDNSFIQVYDTGIRHIN 560
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K V+ K K+I
Sbjct: 561 GKVVQEWVAPKN------------------------------------------KQIKAA 578
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N QIVI+L GG LIYFE+ +++ + + +E VLC+++ P + FLA
Sbjct: 579 SSNSSQIVISLSGGELIYFEIDESHTLVEIFRKNLNVE--VLCLSIQQIPPNRVRANFLA 636
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLA--ESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG DN VRL+S+ KQ + LP+ + + + + EM + T +
Sbjct: 637 VGCLDNVVRLLSIEKDKYFKQLSTHLLPNNSSPQDICISEMNDNGNTMKERNI------- 689
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++L +GL G LLR ++D +G LS++ +YLG++ +K+ + N A
Sbjct: 690 IFLNIGLNTGVLLRSIIDPVAGTLSNHYSKYLGAKSIKICPVNVNKNPA 738
>gi|255725990|ref|XP_002547921.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
gi|240133845|gb|EER33400.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
Length = 1053
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 137/279 (49%), Gaps = 55/279 (19%)
Query: 1 EFDAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
E D Y+V+S S+ TLVLSIGE VE+V S F PT+ +G NS+VQ+Y +GI+H
Sbjct: 465 ENDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGKNSVVQIYTNGIKH 524
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ N +KKKI +D I
Sbjct: 525 VRQIN----------GEKKKI---------------------------TDWLPPAGITIT 547
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
A N +Q++IAL ++YFE+ L E E +++ S +A+ + S F
Sbjct: 548 HAATNNQQVLIALSNLEVVYFEIDHLDDQLIEYQERLELSSSTTALAIEEHTNNHHQSPF 607
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
+G +D T++++SL Q+CL+ +++Q L S+ MI++G +
Sbjct: 608 AIIGCSDETIQVVSLKQQNCLEIQSIQALSSNCSSVKMIKLGK----------------D 651
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
L +++G+ NG R+ +D +G LSD+R++YLGS+PVKL
Sbjct: 652 LMVHIGMNNGVYARIKIDPINGKLSDSRIKYLGSKPVKL 690
>gi|149245793|ref|XP_001527373.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449767|gb|EDK44023.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1223
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 138/281 (49%), Gaps = 60/281 (21%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V + S+ TLV SIGE++E+V+ S F PT+ +G S+VQ+Y G+RHI
Sbjct: 465 DEYLVFTSTLSSETLVFSIGESLEDVTDSKFVLDQPTIAVQQVGKASVVQIYAYGLRHIS 524
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K + + K+ V+D IV
Sbjct: 525 TK-----IGNSKK--------------------------------VTDWYPPAGISIVHA 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N +Q++IAL ++YFE P L E E +++ S V M +S + S F
Sbjct: 548 ATNNKQVLIALSNSEVVYFETDPTDDQLLEYQEKLEVTSPVTSMTIS-----PERSSFAI 602
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G +D T+++ISL PQ CL+ K+LQ L A SL M+ ++ T+ Y
Sbjct: 603 IGCSDETIQVISLQPQSCLEVKSLQALSSKANSLAML---TNERTT-------------Y 646
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+++G++NG R +D+ SG LSD R++YLGS+P+ L ++
Sbjct: 647 VHIGMENGVYARTKIDKFSGKLSDTRVKYLGSKPIALEHVK 687
>gi|402588688|gb|EJW82621.1| splicing factor 3b [Wuchereria bancrofti]
Length = 601
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 84/103 (81%), Gaps = 3/103 (2%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+FD++IVVSF NATLVLSIGETVEEV+ SGF GTTPTL C+ +GD++++QVYPDGIRHI
Sbjct: 484 KFDSHIVVSFVNATLVLSIGETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIR 543
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEM 103
A +V++ K K+ I++CA+N+RQ+ IAL GG L+YFE+
Sbjct: 544 ADR---RVNEWKAPGKRTIMKCALNRRQVAIALAGGELVYFEL 583
>gi|406602265|emb|CCH46158.1| Pre-mRNA-splicing factor [Wickerhamomyces ciferrii]
Length = 1123
Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats.
Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 58/284 (20%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
EFD Y+V+SF + TLVLSIGE VEE++ SG T+ +G NS+VQ++ +GIR+I
Sbjct: 459 EFDKYLVISFMDTTLVLSIGENVEEITDSGLALNEETIGIQQIGINSLVQIHSNGIRNI- 517
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ G LI E P + K I+
Sbjct: 518 ---------------------------------KNGELIN-EWQPPAGIK------ILTT 537
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ RQI I L L+YFE+ ++ E +E ++ S ++ ++L + P G S FL
Sbjct: 538 STTNRQIAIGLSNDELVYFEVDDRDRLI-EYNERKELTSRIVSLSLGDIPEGRLRSPFLI 596
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D+T+R++S P L+ +LQ L + ++ + M L+
Sbjct: 597 VGCQDSTIRVLSTDPGSTLELLSLQALSSIPFDILTLSMN----------------NQLF 640
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
+ +GL+NG +R ++D+ +G LSD R++YLG++PV L KI G
Sbjct: 641 VNIGLENGVYVRTLIDEQNGQLSDTRIKYLGNKPVSLSKISISG 684
>gi|357496593|ref|XP_003618585.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355493600|gb|AES74803.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 702
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 138/272 (50%), Gaps = 65/272 (23%)
Query: 18 SIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKK 77
S+ ETV+EV+ +GF TTP+L S +GD+S++QV+P+GIRHI
Sbjct: 30 SVRETVKEVTDNGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIR----------------- 72
Query: 78 KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLI 137
E +++ + K+ I + N+ Q+VIAL GG LI
Sbjct: 73 ------------------------EDGHINEWRTPGKRTIAKVGSNRLQVVIALNGGELI 108
Query: 138 YFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197
YFE+ TG L E E +M +V C+ ++ P G Q SRFLAVG D T+R++SL P D
Sbjct: 109 YFEVDV-TGQLMEV-EKHEMSGDVACLDIAPVPEGRQRSRFLAVGSYDKTIRILSLDPDD 166
Query: 198 CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQ--NGALLRMVV 255
C++ +Q L +ESL+ +E+ AS VG + NG L R VV
Sbjct: 167 CMQTLGIQSLSSASESLLFLEVQAS--------------------VGGEDGNGVLSRTVV 206
Query: 256 DQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
D +G LSD+R +LG RP KLF I +G A
Sbjct: 207 DMVTGLLSDSRSPFLGLRPPKLFPIVVRGKRA 238
>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
Length = 1169
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 136/284 (47%), Gaps = 60/284 (21%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D +I+V F TLVLS+GE VEEV+ S F + TL S MGD S +QV+ G+RH+
Sbjct: 470 YDGFILVGFEGNTLVLSVGEAVEEVTDSCFLTSITTLHVSMMGDGSYIQVHDGGVRHV-- 527
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
++M V + K K++ A
Sbjct: 528 ---------------------------------------YDM-KVREWKTPTAKRVKVAA 547
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
NQ Q+V+AL GG L+YFE+ +++ ++ +E + C++L G M+ F++V
Sbjct: 548 SNQHQLVLALSGGELVYFELDESHTLVEVAKRSLNVE--ITCLSLQPTAKGRLMANFMSV 605
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
G DN VR++SL Q LKQ + Q LP+ ES+ + E PV L
Sbjct: 606 GALDNLVRVLSLDRQ--LKQYSTQLLPNNSTPESVCIAEFQIG--------THPV----L 651
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
L VGL G ++R +D SG LSD R+LGSR VK I+ Q
Sbjct: 652 MLVVGLNTGVMIRATIDAVSGALSDQYTRFLGSRAVKFKYIKNQ 695
>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
Length = 1202
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 52/289 (17%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAK 62
D YIVV+F+NAT+VLSIG+TVEEV+ SGF T TL S +GD+S++QV+P+G+R + +
Sbjct: 469 DKYIVVTFANATIVLSIGDTVEEVTDSGFLATNKTLSVSLLGDDSLLQVHPNGLRTVRSD 528
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
++S +K I AVNQ+Q+V+AL +IYFE+ V +E K +I
Sbjct: 529 K---RISQFTPPNKGVINLVAVNQQQVVVALADHTMIYFELDAVGQLQEKAKPEI----- 580
Query: 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
GG++ ++ P +G RFLAVG
Sbjct: 581 ---------GGGQIAALDISP-------------------------LGAGRSRGRFLAVG 606
Query: 183 LADN---TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+ + VR++SL P + + Q LP ESL +IE+ S G T L
Sbjct: 607 ASVDGSWFVRILSLDPGSFMHIVSRQALPAKPESLCLIEISIGAAQSD---GGTPT---L 660
Query: 240 YLYVGLQNGALLRMVVDQTSGDLS-DNRMRYLGSRPVKLFKIRCQGNEA 287
+L+ GL+NG L+R+ VD +G L+ + R R+LG++PVKLFK+ Q A
Sbjct: 661 FLFAGLENGVLMRITVDPITGQLAPEFRTRFLGTKPVKLFKVLVQEQPA 709
>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
Length = 1232
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 135/277 (48%), Gaps = 52/277 (18%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKN 63
YI+V F TLVLS+G+ VEEVS S F T TLC M D+S +Q++ GIRHI
Sbjct: 476 GYIIVVFEGNTLVLSVGDAVEEVSNSFFNTETTTLCAMLMYDDSFIQIHEGGIRHI---- 531
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ H VS+ K K+I C+ N
Sbjct: 532 -------------------------------------IDNH-VSEWKPPTSKRIKCCSAN 553
Query: 124 QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL 183
RQI+IAL GG +IYFE+ +++ + ++ CMA+ P+ S F A+
Sbjct: 554 TRQILIALSGGEVIYFEIDESHALVEIFKRNFGV--DITCMAIQAVPTDRVYSSFGAISG 611
Query: 184 ADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLG-NLY 240
DN V+LISL + LKQ + Q LP+ AES+ + ++ D D AG + +L+
Sbjct: 612 LDNVVKLISLEKEKGLKQLSTQLLPNNATAESVCIAQI---DSLVRD--AGHMRRNSSLF 666
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
L VGL G ++R +D +G LSD R+LG+R V+
Sbjct: 667 LVVGLNTGVMIRSNIDAITGALSDQHSRFLGARAVRF 703
>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS
6054]
gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1228
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 147/277 (53%), Gaps = 50/277 (18%)
Query: 3 DAYIVVSFSNA--TLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S + A TLVLSIGE VEEV S F PTL +G +S+VQ+Y +GIRH+
Sbjct: 483 DEYLVISSTVASRTLVLSIGEVVEEVENSQFVNDQPTLAVQQVGTSSVVQIYTNGIRHV- 541
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K+T + DK++S +KI + +P + IV
Sbjct: 542 -KHT--RTEDKEQSISRKIT---------------------DWYPPA------GITIVNA 571
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ ++ Q++IAL + YFE+ L E + ++M + + +A+ + ++ + F
Sbjct: 572 STHREQVIIALSNAEICYFEVDATDDQLIEYQDRVEMSNSITSIAICEETANKK-NLFAV 630
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG +D T++++SL P +CL+ +LQ L + SL M++ +D T+
Sbjct: 631 VGCSDETIQVLSLQPHNCLETLSLQALSANSTSLSMLQ---NDNTT-------------M 674
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
+++G+ NG +R +++ SG+LSD R++YLGS+PV L
Sbjct: 675 VHIGMDNGLYVRTSIEEISGNLSDTRIKYLGSKPVTL 711
>gi|116191283|ref|XP_001221454.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
gi|88181272|gb|EAQ88740.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 126/280 (45%), Gaps = 74/280 (26%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+ D YI+++ S TLVLSIGE V++VS SGF + TL +GD+S+ QV+P GIRHI
Sbjct: 256 KHDTYIILTSSTDTLVLSIGEEVKQVSDSGFLTSVSTLAIQQIGDDSLAQVHPKGIRHI- 314
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ SD+ I+ Q + ++A
Sbjct: 315 -----------RSSDQ--IIEWPAPQHRTIVA---------------------------T 334
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A NQRQ+ +AL G +IYFE+ G L E +M V C++L P G S FLA
Sbjct: 335 ATNQRQVAVALSSGEIIYFELDDADGSLAEYDGREEMSGTVTCLSLGQVPEGRLRSSFLA 394
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D T+R++SL P+ L+ +++Q L +L +I M S
Sbjct: 395 VGCDDRTIRILSLDPESTLESRSVQALTAAPSALAIIPMDDS------------------ 436
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
+G N SD ++LG RPV+LF +
Sbjct: 437 -LLGGSNS--------------SDTNYKFLGVRPVRLFPV 461
>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
Length = 1175
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 60/281 (21%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D +I+V F TLVLS+GE VEEV+ S F + TL + MGD S +QV+ GIRH+
Sbjct: 470 YDGFIIVGFEGNTLVLSVGEAVEEVTDSCFLTSITTLHVALMGDGSFIQVHDAGIRHV-- 527
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+QR V + + K++ A
Sbjct: 528 ----------------------YDQR------------------VKEWRAPSSKRVKVAA 547
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N RQ+++ L GG +IYFE+ +++ +++ +E + C+ L P G ++ F+A+
Sbjct: 548 SNDRQVILGLSGGDVIYFEIDDSGNLVEYAKKSLSVE--ISCLDLQPTPKGRILANFMAI 605
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
G DN+VR+++L LK + Q L + ES+ + E D + +
Sbjct: 606 GTLDNSVRVLTL--DKSLKVVSTQILSNNSTPESVCISEFAVGDSSL------------V 651
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
YL+VGL G +LR VD SG LSD R+LG R VK ++
Sbjct: 652 YLHVGLNTGVMLRSTVDPISGALSDQESRFLGGRAVKFRRV 692
>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
Length = 1230
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 66/295 (22%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D YI+VSF +TL+L IGETVEEV S T+ + + DNS++QV+ GIRHI
Sbjct: 469 DYDGYIIVSFEGSTLILEIGETVEEVVDSLLLTNVTTIHVNILYDNSLIQVHDAGIRHIN 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K V K + K CA
Sbjct: 529 GKVIHEWVPPKNKQIKAATSNCA------------------------------------- 551
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
QIVI+L GG L+YFE+ +++ + + +E+ LC+++ + + FLA
Sbjct: 552 -----QIVISLSGGELLYFEIDESHTLVETFRKNLNVET--LCLSIQQVQENKLRANFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG DN VRL+S+ + Q + LP+ A+ + + EM LGN
Sbjct: 605 VGCLDNVVRLLSIEKEKYFNQLSTFILPNNSSAQDICITEMSE--------------LGN 650
Query: 239 ------LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L +GL NG LLR VVD +G L+++ +YLG++ VK+ + + N A
Sbjct: 651 DKERKLLFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKKNAA 705
>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
strain H]
Length = 1276
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 66/295 (22%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D YI+VSF +TL+L IGETVEEV + T+ + + DNS++QV+ GIRHI
Sbjct: 469 DYDGYIIVSFEGSTLILEIGETVEEVVDTLLLTNVTTIHVNILYDNSLIQVHDTGIRHIN 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K V ++ K K V+ A +
Sbjct: 529 GK-----VINEWVPPKNKQVKAATS----------------------------------- 548
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N QIVI+L GG LIYFE+ +++ +++ +E +LC+++ + + FLA
Sbjct: 549 --NATQIVISLSGGELIYFEIDESHSLVEIFRKSLNVE--ILCLSIQEVEENKVRANFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG DN VRL+S+ + Q + LP+ A+ + + EM LGN
Sbjct: 605 VGCLDNVVRLLSIEKEKYFNQLSTFILPNNSSAQDICISEM--------------CELGN 650
Query: 239 ------LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
L+L +GL NG LLR VVD +G L+++ +YLG++ VK+ + + N A
Sbjct: 651 DKERKLLFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHVKKNPA 705
>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
Length = 1181
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 129/287 (44%), Gaps = 86/287 (29%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++DAYIV+SFSN TLVLSIGETVEEV+ +GF + PTL +G++S++QV+P GIRHI
Sbjct: 485 QYDAYIVLSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIH 544
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A +QR V++ + IV
Sbjct: 545 A-----------------------DQR------------------VNEWPAPQHRSIVAA 563
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N+RQ+ IAL G ++YFEM + G L E E QM V C++L P +
Sbjct: 564 TTNERQVAIALSSGEIVYFEMDTD-GSLAEYDEKRQMSGTVTCLSLGEVPKDD------- 615
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
V + P + + + V++ +G
Sbjct: 616 -------VDFCPVCPIHHVHDRFTLRVD------VILHIG-------------------- 642
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LY G+ LR V+D+ +G+LSD R R+LG +PVKLF + + A
Sbjct: 643 LYSGI----YLRTVLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRA 685
>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain
ANKA]
gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
Length = 1216
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 132/295 (44%), Gaps = 66/295 (22%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D YI+VSF TL+L IGETVEEV S T+ + + DNS +QVY GIRHI
Sbjct: 468 EYDGYIIVSFEGNTLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHIN 527
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K V K K+I
Sbjct: 528 GKIVQEWVPPKN------------------------------------------KQINAA 545
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N QIVI+L GG LIYFE+ + + + I +E +LC+++ + + FLA
Sbjct: 546 TSNGSQIVISLSGGELIYFEIDESHTLTEIFRKNINVE--ILCLSIQQIQQNKLRASFLA 603
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPD--------LAESLVMIEMGASDPTSSDEPAG 232
VG DN VRL+S+ KQ + LP+ ++E M E+G+ +
Sbjct: 604 VGCLDNVVRLLSIEKDQYFKQLSTYILPNNSSPQDICISE---MKELGSQKEHTI----- 655
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LYL +GL G LLR V+D G LS++ +YLG++ VK+ ++ N A
Sbjct: 656 ------LYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPA 704
>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
yoelii]
Length = 1235
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 132/295 (44%), Gaps = 66/295 (22%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D YI+VSF TL+L IGETVEEV S T+ + + DNS +QVY GIRHI
Sbjct: 469 EYDGYIIVSFEGNTLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHIN 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K + K K+I
Sbjct: 529 GKIVQEWIPPKN------------------------------------------KQINAA 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N QIV++L GG LIYFE+ + + + I +E +LC+++ + + FLA
Sbjct: 547 TSNGSQIVVSLSGGELIYFEIDESHTLTEIFRKNINVE--ILCLSIQQIQQNKLRASFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLA--ESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG DN VRL+S+ KQ + LP+ + + + + EM LGN
Sbjct: 605 VGCLDNVVRLLSIEKDQYFKQLSTYILPNNSSPQDICISEMKE--------------LGN 650
Query: 239 ------LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LYL +GL G LLR V+D G LS++ +YLG++ VK+ ++ N A
Sbjct: 651 QKEHTILYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPA 705
>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
Length = 1171
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 67/283 (23%)
Query: 3 DAYIVVSFSNA--TLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V++ + A TLVLSIGE +EEV+ S F PT+ +G +SIVQVY +G+RHI
Sbjct: 465 DEYLVITSTLAFKTLVLSIGEVIEEVNDSKFVMDQPTVAVQQVGKSSIVQVYSNGLRHIN 524
Query: 61 AKN--TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
K T W +P + I
Sbjct: 525 GKKKVTNW-------------------------------------YPPAGIT------IT 541
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
N +Q+++ + L+YFE PE L E + +++ S + M + ++ S F
Sbjct: 542 HATTNNQQVLLGMSNLELVYFETDPEDDQLREYQDRLEVSSPIRSMCIP-----KEQSSF 596
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG +D T+ ++SL Q+CL+ K+LQ L A SLVM+ +P+++
Sbjct: 597 AVVGCSDETISVVSLQSQNCLQVKSLQALSSSANSLVML---THNPSTT----------- 642
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+++G+ NG +R +D +G LSD R++YLG +PV L +++
Sbjct: 643 -LIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPKPVTLNELK 684
>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
Length = 1258
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 132/288 (45%), Gaps = 60/288 (20%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D YIVVSF + TL L + + + EV+ SGF PTL M D S +QV P GIRH+
Sbjct: 490 ESDRYIVVSFVDQTLTLLVTSDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQVMPTGIRHV 549
Query: 60 GA--KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKI 117
A + T W+ A RQ+ +A
Sbjct: 550 AAGRRTTEWR---------------APPGRQVTMA------------------------- 569
Query: 118 VRCAVNQRQIVIALQGGRLIYFEMHPET-GILDECSETIQMESEVLCMALSNAPSGEQMS 176
A N Q+VIAL GG + FE+ +T G L E ++ + EV + + SG S
Sbjct: 570 ---ASNGSQVVIALSGGEIQLFELDADTNGHLSEVAKR-DIGCEVAALTVQPLSSGRTRS 625
Query: 177 RFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTL 236
+F+AV D++VR++SL L+Q Q L A S+ M++ G T
Sbjct: 626 QFMAVAGVDSSVRVLSLDSDRPLRQLAAQALRTTASSVCMLQFGEG------------TT 673
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
+YL +GL++G L+R VVD +G LSD R R LG R V L I G
Sbjct: 674 ATIYLAIGLEDGVLVRSVVDGVTGQLSDQRQRVLGPRRVTLCPITVDG 721
>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
Length = 1256
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 142/280 (50%), Gaps = 55/280 (19%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S S+ TLVLSIGE VEEV+ S F PT+ +G +S+VQ+Y +GIRHI
Sbjct: 483 DEYLVISSTLSSQTLVLSIGEVVEEVNDSQFVTNEPTINVQQVGKSSVVQIYSNGIRHI- 541
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K + + ++ +KK Y + +P + I++
Sbjct: 542 ------KHTMRNDTIEKK---------------------YTDWYPPA------GISIIQA 568
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSR--- 177
+ N Q++I L + YFE+ P L E E ++M + ++ S ++ R
Sbjct: 569 STNNEQVIIGLSNREICYFEIDPHDDQLVEYQERLEMSGGSISALAISSSSISKLQRKSS 628
Query: 178 FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
+ VG +D T++ ISL P +CL+ LQ L + S+ M+ G S TS
Sbjct: 629 YAIVGCSDETIQAISLKPHNCLEIVTLQALSANSSSIAMVPHGYS--TS----------- 675
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
+++G++NG +R+ +D+ +G LSD R+++LGS+PV+L
Sbjct: 676 ---VHIGMENGLYVRVTIDEITGKLSDTRIQFLGSKPVQL 712
>gi|118400837|ref|XP_001032740.1| CPSF A subunit region family protein [Tetrahymena thermophila]
gi|89287084|gb|EAR85077.1| CPSF A subunit region family protein [Tetrahymena thermophila
SB210]
Length = 1197
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 137/289 (47%), Gaps = 55/289 (19%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
YIV+S S T VLSI +T+ V+ S + TL + +N I+QV P+ R I
Sbjct: 470 YIVLSSSKKTYVLSIKDTISAVNDSSLDTNSQTLHAGILENNCIIQVTPESFRQIRDNRV 529
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
T +Y K ES+K V+ N
Sbjct: 530 T---------------------------------LY--------KTESNK--FVKACSNS 546
Query: 125 RQIVIALQGGR------LIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
RQI +ALQGG+ +IYFE G L E ++ S++ C+ + P G +F
Sbjct: 547 RQIALALQGGQGQPGGDIIYFEFDL-GGQLKRIEEKAKLTSDIECIDIGEVPIGRPKFKF 605
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
LAVG D TVR++SL L++ +LQ LP + ES+ +IEM T +++ A
Sbjct: 606 LAVGCKDQTVRILSLEQDQYLQRLSLQALPGIPESVSLIEMKRG--TGTEQEAEEY---Q 660
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
LYL+VGLQNG LLR VDQ +G LSD R R L + P++ K QG A
Sbjct: 661 LYLFVGLQNGILLRATVDQVTGSLSDVRTRVLSAAPIRTCKYVVQGQPA 709
>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
Length = 1286
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 66/295 (22%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D YI+VSF +TL+L IGETVEEV S T+ + + DN+++QV+ GIRHI
Sbjct: 469 DYDGYIIVSFEGSTLILEIGETVEEVVDSLLLTNVTTIHVNILYDNTLIQVHDTGIRHIN 528
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K V K K+I
Sbjct: 529 GKVVHEWVPPKN------------------------------------------KQIKAA 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N QIVI+L GG LIYFE+ +++ + + +E+ LC+++ + + FLA
Sbjct: 547 TSNSTQIVISLSGGELIYFEIDESHTLVEIFRKNLNVET--LCLSIQQVEENKLRANFLA 604
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG DN VRL+S+ + Q + LP+ A+ + + +M LGN
Sbjct: 605 VGCLDNVVRLLSIEKEKYFNQLSTFILPNNSSAQDICISQM--------------CELGN 650
Query: 239 ------LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
++L +GL NG LLR VVD +G L+++ +YLG++ VK+ + + N A
Sbjct: 651 DKERKLIFLNIGLNNGVLLRSVVDPITGTLTNHYSKYLGAKNVKICPVHLKKNSA 705
>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
Length = 1170
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 67/283 (23%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V++ S TLVLS+GE +EEV+ S F PT+ +G +SIVQ+Y +G+RHI
Sbjct: 465 DEYLVITSTLSFKTLVLSLGEVIEEVNDSEFVLDQPTVAVQQVGKSSIVQIYSNGLRHIN 524
Query: 61 A--KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
K T W +P + +
Sbjct: 525 GNKKVTNW-------------------------------------YPPAGIT------VT 541
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
N +Q+ + L L+YFE P+ L E + +++ S + M +S ++ S F
Sbjct: 542 HATTNNQQVFLGLSNLELVYFETDPDDDQLREYQDRLEVSSPIRSMCIS-----KEQSSF 596
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG +D T+ +ISL Q+CL+ K+LQ L A SL+M+ + +P G
Sbjct: 597 AVVGCSDETISVISLQRQNCLQVKSLQALSSSANSLIML---------THKP------GT 641
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+++G+ NG +R +D +G LSD R++YLG +PV L +++
Sbjct: 642 TLIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPKPVTLNELK 684
>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
Length = 1294
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 143/293 (48%), Gaps = 61/293 (20%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D+YI+VSF NA+LVLS+GETVEEVS SGF T+ +NSIVQV+ GI
Sbjct: 471 YDSYIIVSFVNASLVLSVGETVEEVSDSGFSTFVSTIFVQLFSNNSIVQVHAQGI----- 525
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
R I ++ V + K I
Sbjct: 526 -----------------------------------RHIRPDLQTVHEWKPPKGLFIQVAD 550
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSE-------TIQMESEVLCMALSNAPSGEQ 174
N Q+VI L +L+YFE+ ETG+L E E + + S + C++++ +G+
Sbjct: 551 GNASQLVIILNSKQLLYFELD-ETGMLTEIQEVELIQDQSYESSSFLPCVSIAPLVAGQS 609
Query: 175 MSRFLAV--GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAG 232
+ F+AV G++ T RL SL + CLK +LQ L +A S+++I G S P SS
Sbjct: 610 KASFVAVSDGISYYT-RLYSLKKESCLKPISLQALDTVANSVLLI--GLSAPASSR---- 662
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
L L +G +G +R +VD +G LS+ + R +G++PV+L +I QG
Sbjct: 663 ----SELVLLIGSHSGIYIRALVDPITGALSEQQSRLVGTQPVRLQRIEIQGK 711
>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC
6260]
Length = 1206
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 55/283 (19%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S S+ TLVL+IGE VEEV S F PT+ +G S++Q+Y +GIRHI
Sbjct: 474 DEYMVISSSASSKTLVLAIGEVVEEVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIR 533
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
T K++ K F+ +P + I+
Sbjct: 534 QTETEGKITKKT----------------------------FDWYPPAGIT------IISA 559
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLC---MALSNAPSGEQMSR 177
+ NQ Q++I L L YFE+ P L E E I+M +C +A S ++ S
Sbjct: 560 STNQEQVLIGLSNRELCYFEIDPTDDQLIEYQERIEMSGGQICALALASSFVNKSQRKSP 619
Query: 178 FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
F V D TV++ISL +CL+ Q L S V+I S+ TS
Sbjct: 620 FALVACTDETVQVISLQQHNCLETLTFQALSANCTSAVII----SNETS----------- 664
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
L ++GL+NG +R ++ +G SD R++YLG+ VKL I
Sbjct: 665 -LVAHLGLENGLYVRSTLESITGKFSDTRVKYLGADSVKLSAI 706
>gi|146420838|ref|XP_001486372.1| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC
6260]
Length = 1206
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 55/283 (19%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S S+ TLVL+IGE VEEV S F PT+ +G S++Q+Y +GIRHI
Sbjct: 474 DEYMVISSSASSKTLVLAIGEVVEEVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIR 533
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
T K++ K F+ +P + I+
Sbjct: 534 QTETEGKITKKT----------------------------FDWYPPAGIT------IISA 559
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLC---MALSNAPSGEQMSR 177
+ NQ Q++I L L YFE+ P L E E I+M +C +A S ++ S
Sbjct: 560 STNQEQVLIGLSNRELCYFEIDPTDDQLIEYQERIEMSGGQICALALASSFVNKSQRKSP 619
Query: 178 FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
F V D TV++ISL +CL+ Q L S V+I S+ TS
Sbjct: 620 FALVACTDETVQVISLQQHNCLETLTFQALSANCTSAVII----SNETS----------- 664
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
L ++GL+NG +R ++ +G SD R++YLG+ VKL I
Sbjct: 665 -LVAHLGLENGLYVRSTLESITGKFSDTRVKYLGADSVKLSAI 706
>gi|147854459|emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
Length = 2232
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 126/281 (44%), Gaps = 94/281 (33%)
Query: 7 VVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTW 66
VVSF+NATL+ SIG+ VE+VS SGF TT +L S +GD+S++Q++ GIRHI
Sbjct: 60 VVSFANATLMPSIGDEVEKVSDSGFLDTTLSLAVSLIGDDSLMQIHNSGIRHI------- 112
Query: 67 KVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQ 126
+ GR I ++ + K+ IV+ N+ Q
Sbjct: 113 ---------------------------REGRRI-------NEWRTPGKRTIVKVGSNRLQ 138
Query: 127 IVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADN 186
+ A GG LIYFEM +G Q SRFLAVG DN
Sbjct: 139 VAFAPSGGELIYFEMDM---------------------------TGRQRSRFLAVGSCDN 171
Query: 187 TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQ 246
T+R +SL P DC++ LQ + ESL+ +E+ A VG +
Sbjct: 172 TIRSLSLDPDDCMQILGLQSVSSPPESLLFLEVQA--------------------LVGGE 211
Query: 247 NGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GA D + LSD+ R+LG R +KLF + +G A
Sbjct: 212 DGA------DHPASQLSDSCSRFLGLRDLKLFSVIVRGRRA 246
>gi|320581947|gb|EFW96166.1| hypothetical protein HPODL_2449 [Ogataea parapolymorpha DL-1]
Length = 1203
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 46/294 (15%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D YIV+SF + TLVL IGE VEEV SG T TL +G ++VQV+P+G+R +
Sbjct: 482 EYDKYIVLSFVDGTLVLRIGEDVEEVENSGLVLDTNTLGVFQVGSTALVQVHPNGVRQVF 541
Query: 61 -AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
T K D +++ C+ Q+ IAL ++YFE+ +
Sbjct: 542 YVDETPQKTIDWAPPAGIRVLHCSATNSQLAIALSNREIVYFELDDLD------------ 589
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+LI + H E + +++ + L +G +L
Sbjct: 590 ---------------KLIEYNEHKE------------LAAQITALTLGEVQAGTARFPYL 622
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS------DPTSSDEPAGP 233
V D T+ + S P+ L+ + L A SL+ M + D DE
Sbjct: 623 LVACQDKTLTVFSTDPESTLEIVGEEILSSAASSLMAFYMKDTAIVLNKDAGEDDEDEPE 682
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ LY+++G+++G R+ +D +G+LS+ R +Y G RPV+L KI G A
Sbjct: 683 LATSLLYVHIGMESGVYARLQMDPQTGELSNPRNKYTGPRPVQLSKIEAVGQNA 736
>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
Length = 1179
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 57/283 (20%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++D Y+V+SF + TLVLSIGE+V+EVS SG T+ +G NS+ QV+ GI H+
Sbjct: 470 QYDKYMVISFIDGTLVLSIGESVDEVSDSGLELQVSTIAVQQVGRNSLAQVHSHGIVHLK 529
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N + S +K + + V +I+
Sbjct: 530 GLN--------EPSFEKSLWQPPVG-----------------------------AEILVA 552
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
++ QI + L L+YFE+ E L E E +M + ++L P G S FLA
Sbjct: 553 SMTNSQIALGLSNRELVYFEI-DEYDQLIEHKERKEMSGRISALSLGQIPDGRLRSPFLA 611
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VG D T++++S P CL+ +LQ L + L + T+ ++ AG +
Sbjct: 612 VGCNDMTIKILSTDPNSCLEVLSLQALSSIPSDLQI--------TNLEQGAG------YF 657
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSR-----PVKLF 278
+++GL +G +R ++++ SG LSD R+ YLG + PVK+F
Sbjct: 658 VHIGLDSGIYIRTLLNRISGQLSDTRVNYLGPKRVSLSPVKIF 700
>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
Length = 1242
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 62/285 (21%)
Query: 3 DAYIVV--SFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+ S + ++VLSIGE VEEVS SGF T+ +G +S+VQV+ +GIRHI
Sbjct: 500 DDYLVLTSSLTMKSMVLSIGEVVEEVSDSGFALDQHTIAVQQIGQHSLVQVHNNGIRHI- 558
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKK---- 116
R + + V+ K+E++
Sbjct: 559 ------------------------------------RNFFDDSDNVTSKRETNWYPPAGI 582
Query: 117 -IVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMES---EVLCMALSNAPSG 172
I+ + N Q+++ L + YFE+ P L E E +++ L +A G
Sbjct: 583 VILHASTNNEQVLVGLSNREVCYFEIDPADDQLIEYQERLEVTGGSITALALASKFVTEG 642
Query: 173 EQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAG 232
++ S F +G ++ T+++ISL P+ C + LQ L SL+M+
Sbjct: 643 DRKSNFAVIGTSEETIQVISLLPKTCFEIVTLQALSANCFSLLMM--------------- 687
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
P+ N ++++G+ NG R+ +D SG L D+R++YLG++PV L
Sbjct: 688 PLDKDNYFVHIGMINGVYARVRIDVVSGKLGDSRLKYLGTQPVSL 732
>gi|344300987|gb|EGW31299.1| hypothetical protein SPAPADRAFT_140061 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1107
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 127/280 (45%), Gaps = 73/280 (26%)
Query: 3 DAYIVV--SFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D+Y+VV S ++ TLVLSIGE VEEV S TL MG +S+VQVY +GIR IG
Sbjct: 432 DSYLVVTSSLASQTLVLSIGEVVEEVPDSKLVTDQHTLSIQQMGKSSLVQVYTNGIRQIG 491
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
H V+D +
Sbjct: 492 -------------------------------------------HKVTDWFSPAGITVTHA 508
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N Q++IA+ ++YFE+ + ++ E + +++ S + +A+S+ S
Sbjct: 509 STNANQVIIAMSNCEVVYFEIDVDDQLI-EYQQRLELTSSITSLAISDT-----RSDVAV 562
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G AD T++++SLA DCL K+LQ L A SLVMIE
Sbjct: 563 IGCADETIQVVSLAESDCLDVKSLQALSANASSLVMIENT-------------------- 602
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
+++G++NG R +D L D R++YLGSRPV + +I
Sbjct: 603 VHIGMENGVYARTKLD--IKQLKDTRVQYLGSRPVSMSRI 640
>gi|448111975|ref|XP_004201977.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359464966|emb|CCE88671.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1249
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 53/286 (18%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S S+ TLVLSIGE VEEVS S F PT+ G +SIVQV+ +GIR I
Sbjct: 480 DDYLVISSELSSQTLVLSIGEVVEEVSDSEFVTNQPTIHVQQTGKSSIVQVFSNGIRSI- 538
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K D+ E+ +D +++
Sbjct: 539 --------RHIKNGDE-------------------------EIKKTTDWYPPAGISVIKA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMES-EVLCMALSNAPSGEQMSRFL 179
+ N Q++I + + YFE+ L E E +++ + +A+ ++ E+ S
Sbjct: 566 SGNNTQLIIGMSNREVCYFEIDSADDQLIEYQERLEVSGGSISSLAILSSKDPEKRSSHA 625
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+G +D T++++SL +CL LQ L + S++MI S +
Sbjct: 626 IIGSSDETIQVVSLKRHNCLSIVALQALSSKSTSILMINHNDS----------------V 669
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
Y+++G++NG +R ++D+ SG LSD R+++LGS+ V+L I+ GN
Sbjct: 670 YVHIGMENGLYVRTMIDEVSGKLSDTRIKFLGSKSVRLSPIKVPGN 715
>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
albicans SC5314]
Length = 1219
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 57/281 (20%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S S+ TLVLSIGE VE+V S F PT+ +G S+VQ+Y +GI+H+
Sbjct: 497 DEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASVVQIYSNGIKHVR 556
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N K +D +F ++ I
Sbjct: 557 TVNGNKKTTD-----------------------------WFPPAGIT---------ITHA 578
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N +Q++IAL ++YFE+ L E + +++ + + MA+ S + S F
Sbjct: 579 TTNNQQVLIALSNLSVVYFEIDATDDQLIEYQDRLEIATTITAMAIQENIS--EKSPFAI 636
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G +D T++++SL +CL+ K+LQ L S + +G T +
Sbjct: 637 IGCSDETIQVVSLQEHNCLEIKSLQALS-----------ANSSSLKMLKSSGKET----H 681
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+++G++NG R+ +D +G+LS++R++Y+GS+PV L I+
Sbjct: 682 VHIGMENGVYARIKIDTINGNLSNSRVKYIGSKPVSLSVIK 722
>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
Length = 1039
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 102/217 (47%), Gaps = 47/217 (21%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI- 59
++DAYI+++F + T+VLS+GETV +V+ SGF T TL +G NS+ QVY GIRHI
Sbjct: 484 DYDAYIILTFLHDTMVLSVGETVTQVTDSGFITTVATLAVQQIGKNSLFQVYSKGIRHIQ 543
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ T W V + IV A N+RQ+ IAL G ++YFE+
Sbjct: 544 SGQFTEWPV-----PQHRTIVAAATNERQVAIALSSGEIVYFEVD--------------- 583
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ G L F+ E G V + L P G S FL
Sbjct: 584 ------------EDGSLAEFDERKEIG-------------SVTSLGLGPVPEGRLRSPFL 618
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGL-PDLAESLV 215
AVG D TVR++SL P+ L++ L P L L+
Sbjct: 619 AVGCDDCTVRILSLEPESTLEKSENNTLDPSLCAQLL 655
>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
putative [Candida dubliniensis CD36]
gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
Length = 1187
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 57/281 (20%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S S+ TLVLSIGE VE+V S F T+ +G S+VQVY +GI+HI
Sbjct: 466 DEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQSTISVQQVGIASVVQVYSNGIKHIR 525
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N K +D +F ++ I
Sbjct: 526 TVNGKKKTTD-----------------------------WFPPAGIT---------ITHA 547
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
+ N +Q++IAL ++YFE+ L E + +++ + + MA+ S + S F
Sbjct: 548 STNNQQVLIALSNLNVVYFEIDSTDDQLIEYQDHLEISTTITAMAIQEHNS--EKSSFAI 605
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G +D T++++SL +CL+ K+LQ L S + +G T +
Sbjct: 606 IGCSDETIQVVSLQEDNCLEIKSLQALS-----------ANSSSLKMLKSSGKET----H 650
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+++G++NG R+ +D +G+LS++R++YLGS+PV L I+
Sbjct: 651 VHIGMENGVYARIKIDTINGNLSNSRVKYLGSKPVNLSVIK 691
>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1168
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 57/281 (20%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S S+ TLVLSIGE VE+V S F PT+ +G S+VQ+Y +GI+H+
Sbjct: 493 DEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASVVQIYSNGIKHVR 552
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N K +D +F ++ I
Sbjct: 553 MVNGNKKTTD-----------------------------WFPPAGIT---------ITHA 574
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N +Q++IAL ++YFE+ L E + +++ + + MA+ S + S F
Sbjct: 575 TTNNQQVLIALSNLSVVYFEIDATDDQLIEYQDRLEIATTITAMAIQENIS--EKSPFAI 632
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
+G +D T++++SL +CL+ K+LQ L S + +G T +
Sbjct: 633 IGCSDETIQVVSLQEHNCLEIKSLQALS-----------ANSSSLKMLKSSGKET----H 677
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+++G++NG R+ +D +G+LS++R++Y+GS+PV L I+
Sbjct: 678 VHIGMENGVYARIKIDTINGNLSNSRVKYIGSKPVSLSVIK 718
>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
Length = 1218
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 60/291 (20%)
Query: 1 EFDAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
EF Y+++S + + T+ SIG++VE++ S F T+ MGD ++VQV+ GIR
Sbjct: 494 EFHRYLLLSSSYGDLTIACSIGDSVEQIENSSFLENRATVHAQQMGDATLVQVHARGIRS 553
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
I L+ G L ++ + +V
Sbjct: 554 I---------------------------------LESGAL--------NEWPTPAHRTVV 572
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ N+RQ+++AL L +F M + GIL + E +M +V +++ P G Q +++
Sbjct: 573 VASANERQLLLALSSAELAFFFMQ-DDGILVQLEEMPEMSGKVTALSVGRTPKGRQQAKY 631
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG D T+R++S+ L+ +++Q L + SL ++EM DP+S N
Sbjct: 632 AVVGCDDCTIRVLSIELDSPLEPRSVQALSAVPTSLEVVEM--HDPSS-----------N 678
Query: 239 LY---LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNE 286
Y +++GLQ+G LR V+D+T+G+L D R ++LG+RP +L + E
Sbjct: 679 SYVNVVHIGLQSGLYLRAVIDETTGELGDVRTKFLGTRPPRLCPVEINDQE 729
>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis
UAMH 10762]
Length = 1224
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 142/282 (50%), Gaps = 54/282 (19%)
Query: 1 EFDAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
++ +Y+++S + + T+VLSIG+ VE + S F T+ + MGD ++VQV+ GI
Sbjct: 499 DYHSYLLLSSGYGDKTIVLSIGDEVETMENSPFLTNRATITANQMGDATLVQVHARGILS 558
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ L+ G L ++ + IV
Sbjct: 559 V---------------------------------LESGAL--------NEWPAPAHRTIV 577
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ N RQ+++ L L +F M + G+L++ E +M ++ +++ P G+Q +++
Sbjct: 578 AASSNDRQLLLGLSSSELAFFFMG-DDGVLNQLEEMPEMSGKITALSVGQTPRGQQQAKY 636
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG D T+R+ S+ + L+ +++Q L + S+ ++EM DP+S+ L N
Sbjct: 637 AVVGCDDCTIRVYSIELETALEPRSVQALSAVPTSIEVVEM--LDPSSN-------VLVN 687
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
Y+++GLQ+G LR V+D +G+L + R R+LG+RP ++F +
Sbjct: 688 -YVHIGLQSGLYLRAVIDDVTGELGEVRTRFLGARPTRIFPV 728
>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
Length = 1223
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 54/288 (18%)
Query: 1 EFDAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
E Y+++S + + T+ SIG++VE++ S F T+ MGD +VQV+ GIR
Sbjct: 499 EHHRYLLLSSNYGDLTIACSIGDSVEQIENSNFLENRATVHAEQMGDAVLVQVHARGIRS 558
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
I Q G+L ++ + V
Sbjct: 559 I---------------------------------YQDGKL--------NEWNTPAHRTCV 577
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ NQRQ+++ L L +F M E IL + E +M ++ +++ + P G Q +++
Sbjct: 578 VASANQRQLLLGLSSAELCFFWMG-EDEILVQLEEMPEMSGKITAISVGSTPKGRQQAKY 636
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG D T+R++S+ L+ +++Q L + SL ++EM DP S T N
Sbjct: 637 AVVGCDDCTIRVLSIELDSPLEARSVQALSAVPTSLEVVEM--LDPASG-------TTVN 687
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNE 286
+ +++GLQ+G LR ++D+T+G+L D R ++LG++ +L ++ + E
Sbjct: 688 V-VHIGLQSGLYLRAIIDETTGELGDVRTKFLGTKAPRLCPVQVEDEE 734
>gi|124359136|gb|ABD32504.2| CPSF A subunit, C-terminal; WD40-like [Medicago truncatula]
Length = 632
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 26/182 (14%)
Query: 106 VSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMA 165
+++ + K+ I + N+ Q+VIAL GG LIYFE+ TG L E E +M +V C+
Sbjct: 17 INEWRTPGKRTIAKVGSNRLQVVIALNGGELIYFEVD-VTGQLMEV-EKHEMSGDVACLD 74
Query: 166 LSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPT 225
++ P G Q SRFLAVG D T+R++SL P DC++ +Q L +ESL+ +E+ AS
Sbjct: 75 IAPVPEGRQRSRFLAVGSYDKTIRILSLDPDDCMQTLGIQSLSSASESLLFLEVQAS--- 131
Query: 226 SSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
NG L R VVD +G LSD+R +LG RP KLF I +G
Sbjct: 132 ---------------------NGVLSRTVVDMVTGLLSDSRSPFLGLRPPKLFPIVVRGK 170
Query: 286 EA 287
A
Sbjct: 171 RA 172
>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum
NZE10]
Length = 1223
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 138/272 (50%), Gaps = 58/272 (21%)
Query: 9 SFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI---GAKNTT 65
S+ + T+ SIG++VE++ S F T+ MGD ++VQV+ GIR I GA N
Sbjct: 509 SYGDLTIACSIGDSVEQIESSPFLENRATVHAQQMGDATLVQVHARGIRSILESGAHNE- 567
Query: 66 WKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQR 125
W+ + R +V+A + N+R
Sbjct: 568 WQ---------------SPAHRTVVVA----------------------------SANER 584
Query: 126 QIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLAD 185
Q+++AL L +F M + GIL++ E +M ++ +++ P G Q +R+ VG D
Sbjct: 585 QLLLALSSAELAFFFMG-DDGILNQLEEMPEMSGKITALSVGQTPRGRQQARYAVVGCDD 643
Query: 186 NTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGL 245
T+R++S+ L+ +++Q L + SL ++EM DP S+ T+ N+ +++GL
Sbjct: 644 CTIRVLSIELDSPLEPRSVQALSAIPTSLEVVEM--LDPASN-------TIVNV-VHIGL 693
Query: 246 QNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
Q+G LR ++D+T+G+L D R ++LG++P +L
Sbjct: 694 QSGLYLRAIIDETTGELGDVRTKFLGTQPPRL 725
>gi|448114553|ref|XP_004202604.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
gi|359383472|emb|CCE79388.1| Piso0_001448 [Millerozyma farinosa CBS 7064]
Length = 1248
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 53/286 (18%)
Query: 3 DAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V+S S+ TLVLSIGE VEEVS S F P + G++SIVQV+ +GIR I
Sbjct: 480 DDYLVISSELSSQTLVLSIGEVVEEVSDSEFVTDQPAIHVQQTGNSSIVQVFSNGIRSI- 538
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
R N + E+ +D + +
Sbjct: 539 --------------------RHIRNGDE-------------EIKKTTDWYPPAGISVTKA 565
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMES-EVLCMALSNAPSGEQMSRFL 179
+ N Q++I + + YFE+ P L E E +++ + +A+ ++ EQ S
Sbjct: 566 SGNSTQLIIGMSNREVCYFEIDPVDDQLVEYQERLEVSGGSISSLAILSSKDPEQRSAHA 625
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+G +D T++++SL +CL LQ L + S++M+ S +
Sbjct: 626 IIGSSDETIQVVSLKRHNCLSVVALQALSSKSTSILMLRHEDS----------------I 669
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGN 285
Y+++G++NG + ++D+ SG LSD R+++LGS+ V+L I+ G+
Sbjct: 670 YVHIGMENGLYVCTMIDEVSGKLSDTRIKFLGSKSVRLSPIKVPGS 715
>gi|71028348|ref|XP_763817.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350771|gb|EAN31534.1| hypothetical protein TP04_0182 [Theileria parva]
Length = 1231
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 130/286 (45%), Gaps = 72/286 (25%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-------IVQVYPD 54
+D YI++SF TLVLSIGE VEEV+ S F + TL MG S VQV+
Sbjct: 471 YDEYIIISFQGNTLVLSIGEAVEEVTDSFFLTSITTLHSCHMGSTSGSVGGGIFVQVHDG 530
Query: 55 GIRHI-GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESD 113
G R++ G WKV K V+ A N
Sbjct: 531 GFRYLTGDVVKEWKVQTTKR------VKLADN---------------------------- 556
Query: 114 KKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSET--IQMESEVLCMALSNAPS 171
N Q+V+ L GG +IYF++ E +L E E + +EV C+A+ + S
Sbjct: 557 ---------NNTQLVLVLTGGEVIYFQL-TEADVL-ELVEVGRRNLSTEVTCLAVQHQVS 605
Query: 172 GEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPA 231
G + + F G DN VR++ L L + G L ES+ ++ TS DE
Sbjct: 606 GNK-AEFCCCGSIDNIVRVMKLDKTLKLCSSQILGNNSLPESVALL------TTSVDE-- 656
Query: 232 GPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
LYLYVGL NG L+R VD +G+LSD R+LG++P++L
Sbjct: 657 -------LYLYVGLNNGVLIRNTVD-VAGNLSDQESRFLGAKPLRL 694
>gi|452986188|gb|EME85944.1| hypothetical protein MYCFIDRAFT_59215 [Pseudocercospora fijiensis
CIRAD86]
Length = 1223
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 140/288 (48%), Gaps = 54/288 (18%)
Query: 1 EFDAYIVVS--FSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
E Y+++S + + T+ SIG++VE++ S F T+ MGD+++VQV+ GIR
Sbjct: 499 EHHKYLIISSSYGDLTVACSIGDSVEQIENSPFLENRATVHAQQMGDSTLVQVHARGIRS 558
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
I L+ G + P + +
Sbjct: 559 I---------------------------------LETGAFNEWPTPP--------HRTVA 577
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ N+RQ+++AL L +F M E GIL + E +M ++ +++ P G Q +++
Sbjct: 578 AASANERQLLLALSSAELAFFFMG-EDGILIQLEEMPEMSGKITAISVGQTPKGRQQAKY 636
Query: 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
VG D T+R++S+ L+ +++Q L + SL ++EM DP S T N
Sbjct: 637 AVVGCEDCTIRVLSIELDSPLEARSVQALSAVPTSLEVVEM--LDPASG-------TTVN 687
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNE 286
+ +++GL++G LR ++D+T+G+L D R ++LG++P +L + G +
Sbjct: 688 V-VHIGLRSGLYLRAIIDETTGELGDVRTKFLGTKPPRLCPVEVDGED 734
>gi|84996279|ref|XP_952861.1| splicing factor 3b subunit [Theileria annulata strain Ankara]
gi|65303859|emb|CAI76236.1| splicing factor 3b subunit, putative [Theileria annulata]
Length = 1340
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 28/277 (10%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD YI++SF TLVLSIGE VEEV+ S F + TL C M Y +G+ G
Sbjct: 524 FDEYIIISFQGNTLVLSIGEAVEEVTDSFFLTSITTLHCCYMS-------YRNGVSSSGV 576
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ ++ + R I + + G Y + + K K++
Sbjct: 577 GGVSGVSGVGTVTNGVPVTGGTGITRGIYVQIHDGGYRYLSGDIIKEWKVQSTKRVKLAD 636
Query: 122 VNQRQIVIALQGGRLIYFEM-HPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+++ L GG +IYF++ E L E + +E+ C+A+ + SG + + F
Sbjct: 637 NNDTQLILVLTGGEIIYFQLTDTEVPELVEVGRR-NLSTEITCLAIQHPNSGTK-AEFCC 694
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
G DN VR++ L L + G L ES+ ++ ++DE +Y
Sbjct: 695 CGSIDNIVRIMKLDKNLKLCSSQILGNNSLPESVTLL--------TNDE---------IY 737
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
LYVGL NG L+R +D G+L D R++G++P+KL
Sbjct: 738 LYVGLNNGVLIRNTLDMI-GNLIDQESRFMGTKPLKL 773
>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 1078
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+DAYIVVSF+NATLV SIGE V+E + SGF GT PTL + DNS++QVYP G+RHI
Sbjct: 456 EYDAYIVVSFANATLVFSIGEEVKETNESGFLGTVPTLHTQLLADNSMLQVYPGGLRHIR 515
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRL 98
++++ K ++ I A N +Q+ IALQGG +
Sbjct: 516 PDR---RINEWKVPGRRVIKAAASNDKQVAIALQGGEV 550
>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
Length = 1212
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 122/292 (41%), Gaps = 92/292 (31%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHI 59
++D YI++SF N TLVLSIGET+EEV+ +GF + PTL + DN ++QV+P G+RH
Sbjct: 506 QYDKYIILSFVNGTLVLSIGETIEEVADTGFLSSAPTLAVQQLADNGGLIQVHPGGVRH- 564
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
V Q +A G V++ + +++
Sbjct: 565 ------------------------VRPSQGDLASTAG---------VTEWRAPQGRQVAS 591
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N RQ+ +AL G L+YFE+ G+L E E + S V+CM+++ P G Q
Sbjct: 592 ATTNTRQVCVALNSGELVYFELD-LNGVLQEYGEMRAVGSAVVCMSIAEVPEGRQ----- 645
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP-VTLGN 238
P S+ GP V LGN
Sbjct: 646 --------------------------------------------PNGSNHFLGPRVDLGN 661
Query: 239 LYLYVGLQNGALLRMV--VDQTS---GDLSDNRMRYLGSRPVKLFKIRCQGN 285
+L GL + +V ++TS + N +LG+RPV+L ++ Q N
Sbjct: 662 -HLVTGLSRHVWMLVVGLTNETSVVGAHGTSNVYFFLGTRPVRLTRVSVQRN 712
>gi|358255664|dbj|GAA57348.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
Length = 1055
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 189 RLISLAPQDCLKQKNLQGLPDLAESLVMIEMGA---SDPTSSDEPAGPVTLGNLYLYVGL 245
R I +A DCL +QGLP ESL ++EMG S PT +E G LYL +GL
Sbjct: 424 RSIVIATDDCLAPLTMQGLPSTPESLCIVEMGVGEPSGPTDENENETLPATGILYLNIGL 483
Query: 246 QNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
NG LLR+++D +G+LSD R RYLG+RPVKLF+I QG EA
Sbjct: 484 INGVLLRVILDPVTGELSDTRTRYLGTRPVKLFRIMMQGGEA 525
>gi|344231825|gb|EGV63707.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
gi|344231826|gb|EGV63708.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
Length = 991
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 76/279 (27%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI-GA 61
DAY+V+S S+ T VLSIGE V EV+ S F PT+ +G +++QVY +GI+HI G
Sbjct: 390 DAYLVIS-SSETSVLSIGEEVAEVTDSKF-SKDPTILVQQVGKMALIQVYSNGIKHINGE 447
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
K T W +N I++ +
Sbjct: 448 KVTDW------------FPPAGIN-------------------------------IIKAS 464
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N +Q++I L +IYFE+ + ++ E + +++ + + +A+S F
Sbjct: 465 SNNQQLIIGLTNNEVIYFEVDVDDQLV-EYQDKVELPTNITALAIS--------KDFAVA 515
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G AD TV++ISL Q+CL+ ++Q L SS+ A + +
Sbjct: 516 GCADETVQVISLKQQNCLEILSMQML------------------SSNSSA--IEFSEQEV 555
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
++G++NG +R +D G LS+ R++YLG++P++L KI
Sbjct: 556 HIGMENGLFVRTNID-ARGKLSNTRVKYLGTKPIRLSKI 593
>gi|50549733|ref|XP_502337.1| YALI0D02717p [Yarrowia lipolytica]
gi|74634908|sp|Q6CAH5.1|RSE1_YARLI RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49648205|emb|CAG80525.1| YALI0D02717p [Yarrowia lipolytica CLIB122]
Length = 1143
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 54/285 (18%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAK 62
D YIV+S++NATLVL IG++V E + SG PTL C ++G +S VQV DG+ I
Sbjct: 469 DKYIVLSYANATLVLEIGDSVVETTSSGLTLDKPTLHCGSVG-SSYVQVMTDGMNVI--- 524
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
+S + S+ + Q++ A +
Sbjct: 525 ----PMSREGSSESLPATKWTAPSGQVICA----------------------------SS 552
Query: 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
+ Q+V+ L L YFE P + L ++ S +A++ P+G S F+AV
Sbjct: 553 SSHQVVLGLTS-SLFYFEDTPGSE-LSAYDGAYELSSPPTAVAVAPVPAGRVRSPFVAVA 610
Query: 183 LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLY 242
D TVR++S+ P+ + +QGL A SL ++ +G LYL+
Sbjct: 611 TDDETVRIVSVDPESMFETVAVQGLMATASSLALLSVGQV----------------LYLH 654
Query: 243 VGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+GL NG +R+ +D +G++ + +++G + + + C G E+
Sbjct: 655 MGLANGVYVRVELDPLTGEIVGSWSKFVGLGRLSVVPVTCGGEES 699
>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
Length = 1300
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 75/296 (25%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMG-DNSIVQVYPDGIRHIG 60
+ ++I++SF + TLVLS+GE VEE+S S F + T+ S+M NS +Q+ ++ I
Sbjct: 483 YHSFIIISFIDRTLVLSVGEQVEEISDSPFTLSESTIYASSMELKNSYLQILETYVKLIT 542
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + + K D + IV
Sbjct: 543 EEK------------------------------------------IYEWKAPDGRHIVAA 560
Query: 121 AVNQRQIVIALQGGRLIYFEMH----------PETGILDECSETIQMESEVLCMALSNAP 170
N RQI +AL GG ++ EM+ G+ + C ++ +++C+++
Sbjct: 561 DSNGRQISLALSGGYIVILEMNTIDLISGTTNSIMGLTELCHR--EVSYDIICISIQQLI 618
Query: 171 SGEQMSR-FLAVGLA-DNTVRLISLAPQDC-LKQKNLQGLPD---LAESLVMIEMGASDP 224
++ R ++AVG + DN+VR+ + D LKQ + Q +P+ + E++V+ + G +D
Sbjct: 619 YPTKLCREYVAVGTSTDNSVRVYWINTADKKLKQTSTQVMPNASSIPENIVLYKPGLND- 677
Query: 225 TSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
+LYL +GL NG LL +VD+ +G LSDNR R+LG + +K+ ++
Sbjct: 678 -------------SLYLLIGLNNGVLLCCIVDELNGTLSDNRSRFLGGKSIKMVRV 720
>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 8/112 (7%)
Query: 178 FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSDEPAGPVT 235
LAVG DNTVR++SL P DCL+ ++Q + ESL+ +E+ AS +D PA
Sbjct: 20 LLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGEDGADHPA---- 75
Query: 236 LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
NL+L GLQNG L R VVD +G LSD+R R+LG +P KLF I +G A
Sbjct: 76 --NLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSA 125
>gi|238609081|ref|XP_002397396.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
gi|215471757|gb|EEB98326.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
Length = 180
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
FD+YI++SF N TLVLSIGET+EEV +GF + PTL +G ++++QV+P GIRH+ A
Sbjct: 97 FDSYIILSFVNGTLVLSIGETIEEVQDTGFLSSAPTLAVQQIGADALLQVHPGGIRHVLA 156
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQ 88
+ +V++ + K IV N+RQ
Sbjct: 157 DS---RVNEWRVPTGKSIVAATTNKRQ 180
>gi|403224220|dbj|BAM42350.1| splicing factor 3b subunit [Theileria orientalis strain Shintoku]
Length = 1272
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 129/281 (45%), Gaps = 35/281 (12%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
+D +I+VSF TLVLSIGE VEEV+ S F + TL M + + R G
Sbjct: 467 YDEFIIVSFQGNTLVLSIGEAVEEVTDSFFLTSITTLHSCYMSNYHATESLEG--RFEGG 524
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
VSD I + + Y V + K K++
Sbjct: 525 ------VSDG-----------------IFVQVHDSGFRYSHGQVVKEWKVPSTKRVKLAD 561
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAP---SGEQMSR- 177
N Q+++ L GG ++YFE+ L+E ++ + +E+ C+AL + P +GE++ +
Sbjct: 562 NNLNQLLLVLSGGEVVYFELVDND--LEEVAKR-NLSTEITCVALQHTPASKAGERVRKG 618
Query: 178 -FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTL 236
F VG DN +R++ L + L L ESL ++ + S +G +
Sbjct: 619 EFCCVGSIDNIIRVLKLDKTLKMCSSQLLSNNALPESLALV-TAETGSGSGGGSSGGLGE 677
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YLYVGL NG L+R VD G+LSD R++G++ VKL
Sbjct: 678 SESYLYVGLNNGILIRNNVDSL-GNLSDQESRFMGTKAVKL 717
>gi|428180132|gb|EKX49000.1| hypothetical protein GUITHDRAFT_105085 [Guillardia theta CCMP2712]
Length = 1207
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 52/289 (17%)
Query: 3 DAYIVVSFSNA---TLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
D YIVVS +++ TLVLSIGETVE V+ G ++ + MGD ++QV+ +GI+
Sbjct: 471 DRYIVVSLAHSSVQTLVLSIGETVEAVANHGLLPHAKSISIATMGD-CMIQVHTNGIQ-- 527
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
++GG+ I + ++
Sbjct: 528 --------------------------------VMKGGKNI--------PSPFASSNPVIL 547
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N++Q+++ G Y EM TG L E + EV + ++ + + + +F
Sbjct: 548 SVNNEQQMLVTQTDGVTSYLEMEG-TGTLREKGKININAQEVCAVEVTPLSASQTLGKFA 606
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+G + + + D ++ G L I + S SS EP V
Sbjct: 607 IMGAFMDNAWFLCVVSLDASSFSSVVGRQVLQARPSSIALLQSYSRSSREPGRSV----F 662
Query: 240 YLYVGLQNGALLRMVVDQTSGDLS-DNRMRYLGSRPVKLFKIRCQGNEA 287
+LYVGL+NG L+RM + +G++S + R R LGS PVKL +++ Q EA
Sbjct: 663 FLYVGLENGVLMRMSFNAETGEISQEFRTRSLGSNPVKLVRVKVQEKEA 711
>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
Length = 1318
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 69/290 (23%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAM-GDNSIVQVYPDGIRHIGAKN 63
YI++SF + +LVL+IGE VEE + + F T+ ++M NS +QV ++ I
Sbjct: 481 YIIISFIDRSLVLTIGEHVEETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKLI---- 536
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ D+ + D K D +KI+ N
Sbjct: 537 ----IQDR----------------------------------IYDWKTPDSRKIIAADSN 558
Query: 124 QRQIVIALQGGRLIYFEMHPET----------GILDECSETIQMESEVLCMALSN-APSG 172
RQ+ +AL+GG ++ E++ G+++ C ++ E++C+ + + SG
Sbjct: 559 GRQVSLALEGGLIVILELNVNGVSGITNTGIGGLVEVCRR--EITCEIICIGIQQLSYSG 616
Query: 173 EQMSRFLAVGLA-DNTVRLISL-APQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
+ S ++ VG + +N +RL + + + LKQ Q LP+ +++ S+
Sbjct: 617 QMRSDYVVVGTSTENALRLYKIDSAEKRLKQTCTQILPNSNSIPENVQLYHSNK------ 670
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
G+L L+VGL G +L VD ++G +SD R +YLG+R V + +I
Sbjct: 671 -----YGHLILFVGLTTGVILSCKVDASNGSISDPRSKYLGNRGVNICRI 715
>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
Length = 1317
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 69/290 (23%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAM-GDNSIVQVYPDGIRHIGAKN 63
YI++SF + +LVL+IGE VEE + + F T+ ++M NS +QV ++ I
Sbjct: 481 YIIISFIDRSLVLTIGEHVEETNDTLFTLNETTMYAASMIFYNSFLQVLETHVKLI---- 536
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ D+ + D K D +KI+ N
Sbjct: 537 ----IQDR----------------------------------IYDWKTPDSRKIIAADSN 558
Query: 124 QRQIVIALQGGRLIYFEMHPET----------GILDECSETIQMESEVLCMALSN-APSG 172
RQ+ +AL+GG ++ E++ G+++ C ++ E++C+ + + SG
Sbjct: 559 GRQVSLALEGGLIVILELNVNGVSGITNTGMGGLVEVCRR--EITCEIICIGIQQLSYSG 616
Query: 173 EQMSRFLAVGLA-DNTVRLISL-APQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
+ S ++ VG + +N +RL + + + LKQ Q LP+ +++ S+
Sbjct: 617 QMRSDYVVVGTSTENALRLYKIDSAEKRLKQTCTQILPNSNSIPENVQLYHSNK------ 670
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
G+L L+VGL G +L VD ++G +SD R +YLG+R V + +I
Sbjct: 671 -----YGHLILFVGLTTGVILSCKVDASNGSISDPRSKYLGNRGVNICRI 715
>gi|294889072|ref|XP_002772683.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
gi|239877121|gb|EER04499.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
Length = 229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D YIVVSF + TL L + + + EV+ SGF PTL M D S +QV P GIRH+
Sbjct: 90 ESDRYIVVSFVDQTLTLLVTSDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQVMPTGIRHV 149
Query: 60 GA--KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESD-KKK 116
A + T W+ ++ + A N Q+VIAL GG + FE+ ++ S+ K+
Sbjct: 150 AAGRRTTEWRAPPGRQ-----VTMAASNGSQVVIALSGGEIQLFELDADTNGHLSEVAKR 204
Query: 117 IVRCAV 122
+ C V
Sbjct: 205 DIGCEV 210
>gi|301616502|ref|XP_002937687.1| PREDICTED: DNA damage-binding protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 1140
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 64/282 (22%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D +V+SF T VL++ GE VEE +GF T C + ++Q+ +R +
Sbjct: 422 DDTLVLSFVGQTRVLTLTGEEVEETDLAGFVDDQQTFFCGNVAHQQLIQITSASVRLV-- 479
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
A N + +V S+ KE +K+ C+
Sbjct: 480 ---------------------AQNPQSLV----------------SEWKEPQGRKVSVCS 502
Query: 122 VNQRQIVIALQGGRLIYF-EMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N RQ+++A+ GR++Y+ E+HP G L + S T +ME EV C+ ++ + +S A
Sbjct: 503 CNSRQVLLAV--GRVLYYLEIHP--GELRQISCT-EMEHEVACLDVTPLGGSDTLSSLCA 557
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+GL D + R++SL P L K + G + S++M +S
Sbjct: 558 IGLWTDISARILSL-PGFQLLHKEMLGGEIIPRSILMTSFESSH---------------- 600
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 YLLCALGDGALFYFSLNTDTGLLSDRKKVTLGTQPTVLRTFR 642
>gi|147906138|ref|NP_001083624.1| DNA damage-binding protein 1 [Xenopus laevis]
gi|82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|38303806|gb|AAH61946.1| Ddb1 protein [Xenopus laevis]
Length = 1140
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 64/282 (22%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D +V+SF T VL++ GE VEE +GF T C + ++Q+ +R +
Sbjct: 422 DDTLVLSFVGQTRVLTLTGEEVEETDLAGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQ 481
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
N + +V S+ KE +K+ C+
Sbjct: 482 -----------------------NPQNLV----------------SEWKEPQGRKVSVCS 502
Query: 122 VNQRQIVIALQGGRLIYF-EMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N RQ+++A+ GR++Y+ E+HP G L + S T +ME EV C+ ++ + +S A
Sbjct: 503 CNSRQVLLAV--GRVLYYLEIHP--GELRQTSCT-EMEHEVACLDVTPLGGNDTLSSLCA 557
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+GL D + R++SL P L K + G + S++M +S
Sbjct: 558 IGLWTDISARILSL-PGFQLLHKEMLGGEIIPRSILMTSFESSH---------------- 600
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 YLLCALGDGALFYFSLNTDTGLLSDRKKVTLGTQPTVLRTFR 642
>gi|351711389|gb|EHB14308.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
Length = 273
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQ 50
EFDAYI+VSF NATLVLSIGETV +V+ SGF GTT TL CS +GD+++V
Sbjct: 224 EFDAYIIVSFMNATLVLSIGETVGKVTDSGFLGTTSTLSCSLLGDDALVH 273
>gi|147793838|emb|CAN71167.1| hypothetical protein VITISV_038358 [Vitis vinifera]
Length = 289
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 33/163 (20%)
Query: 118 VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSR 177
V+ N+ Q+VIAL G LIYFE+ + +++ E +M +V C ++ P G SR
Sbjct: 4 VKVGPNRLQVVIALSKGELIYFEVDMTSQLME--VEKYEMSGDVACSDIAPVPKGRXRSR 61
Query: 178 FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
FL VG D T+ ++SL P D ++ ++Q + ESL
Sbjct: 62 FLTVGSXDYTIHILSLDPDDYMQILSMQSVSFPPESLSQFRH------------------ 103
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
R+VVD +G LSD R R LG R K F +
Sbjct: 104 -------------XRIVVDMATGQLSDARSRSLGLRAPKPFYV 133
>gi|374109159|gb|AEY98065.1| FAFR382Wp [Ashbya gossypii FDAG1]
Length = 1288
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 64/283 (22%)
Query: 2 FDAYIVVSFSNATLVLSIGE-TVEEV---SGSGFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
F + ++ +T++L I TVEE+ T+ + MG SI+QV + +
Sbjct: 486 FHKLLFIALQESTMILKIAAGTVEELELPHNPFVIAQDKTVLIAHMGGQSIIQVTENKMV 545
Query: 58 HIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKI 117
HI + ++ ES + K+ E P + I
Sbjct: 546 HI--------IENRDESYESKL----------------------EWFPPA------GICI 569
Query: 118 VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSR 177
++ + N Q+++AL ++YFE+ L+E + I++E + +A+ N S
Sbjct: 570 LKASSNSTQLILALSNNEVVYFEIGSNES-LNELQDRIEVEERITALAIGNG----NRSD 624
Query: 178 FLAVGLADNTVRLISLAPQD---CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPV 234
++ + D+TV++ SL QD L+ ++Q L A SL + G
Sbjct: 625 YMIIASVDSTVKVYSLKVQDQANFLEVVSMQVLVSPASSLQLASSG-------------- 670
Query: 235 TLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
G+L L++GL +G +R +D+ +G+L D R +YLG++PV++
Sbjct: 671 --GSLCLHIGLDSGVYVRSKLDRNTGELFDVRTKYLGTKPVEI 711
>gi|302308830|ref|NP_985929.2| AFR382Wp [Ashbya gossypii ATCC 10895]
gi|442570014|sp|Q753D4.2|RSE1_ASHGO RecName: Full=Pre-mRNA-splicing factor RSE1
gi|299790815|gb|AAS53753.2| AFR382Wp [Ashbya gossypii ATCC 10895]
Length = 1288
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 64/283 (22%)
Query: 2 FDAYIVVSFSNATLVLSIGE-TVEEV---SGSGFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
F + ++ +T++L I TVEE+ T+ + MG SI+QV + +
Sbjct: 486 FHKLLFIALQESTMILKIAAGTVEELELPHNPFVIAQDKTVLIAHMGGQSIIQVTENKMV 545
Query: 58 HIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKI 117
HI + ++ ES + K+ E P + I
Sbjct: 546 HI--------IENRDESYESKL----------------------EWFPPA------GICI 569
Query: 118 VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSR 177
++ + N Q+++AL ++YFE+ L+E + I++E + +A+ N S
Sbjct: 570 LKASSNSTQLILALSNNEVVYFEIGSNES-LNELQDRIEVEERITALAIGNG----NRSD 624
Query: 178 FLAVGLADNTVRLISLAPQD---CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPV 234
++ + D+TV++ SL QD L+ ++Q L A SL + G
Sbjct: 625 YMIIASVDSTVKVYSLKVQDQANFLEVVSMQVLVSPASSLQLASSG-------------- 670
Query: 235 TLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
G+L L++GL +G +R +D+ +G+L D R +YLG++PV++
Sbjct: 671 --GSLCLHIGLDSGVYVRSKLDRNTGELFDVRTKYLGTKPVEI 711
>gi|414872273|tpg|DAA50830.1| TPA: hypothetical protein ZEAMMB73_069624 [Zea mays]
Length = 507
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 8/96 (8%)
Query: 166 LSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--D 223
++ P G Q SRFLAVG DNT+R++SL P DCL+ ++Q + ESL+ +E+ AS
Sbjct: 127 IAPVPEGRQRSRFLAVGSYDNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGG 186
Query: 224 PTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTS 259
+D PA NL+L GLQNG L VD +
Sbjct: 187 EDGADYPA------NLFLNAGLQNGVLFHTNVDMVT 216
>gi|328874742|gb|EGG23107.1| UV-damaged DNA binding protein1 [Dictyostelium fasciculatum]
Length = 1116
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 126/289 (43%), Gaps = 74/289 (25%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D Y+++SF ++T VL GE +EE +GF +PTL C + D I+Q+ GI +
Sbjct: 405 DRYLILSFISSTKVLEFQGEDIEETEIAGFDLQSPTLYCGNVADKQILQISTSGIYLVDH 464
Query: 62 KNT----TWKVSDKKESDKKKIVRCAVNQ-RQIVIALQGGRLIYFEMHPVSDKKESDKKK 116
+ WK S + A +Q QI+I+ G LIYFE + D+K
Sbjct: 465 ETNLNYDVWKPSSGS-------INLASHQGNQILISF-GKTLIYFE---IKDQK------ 507
Query: 117 IVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMS 176
+I L+ ++ME E+ C+ +S+ GE+ S
Sbjct: 508 -----------IIKLK---------------------ELEMEFEISCLDISSFQVGER-S 534
Query: 177 RFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235
+ VGL D ++R++SL + + ++NL G + S++MI +
Sbjct: 535 KICVVGLWTDISLRILSLPTLEQVHKENLGG-EVIPRSVLMIAFEGIN------------ 581
Query: 236 LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +VD + L + + LG++P+ L K + +G
Sbjct: 582 ----YLLCSLGDGHLFNFIVDTINNTLHERKKVSLGNQPIILSKFQLKG 626
>gi|91087281|ref|XP_975549.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270010588|gb|EFA07036.1| hypothetical protein TcasGA2_TC010010 [Tribolium castaneum]
Length = 1149
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 114/282 (40%), Gaps = 62/282 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+D +V++F T VLS+ GE VEE +GF T C + IVQ+ P R I
Sbjct: 421 YDNTLVLAFVGQTRVLSLNGEEVEETDIAGFASDQQTFFCGNVIHEQIVQITPISARLIS 480
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
A+N T K SD K I A N QIV++ G L Y E+H
Sbjct: 481 AQNKTLLAEWKPPSD-KNIAVVACNTCQIVVS-TGSILYYIEIH---------------- 522
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
Q +++ ++G ++ EV C+ +S G S ++A
Sbjct: 523 ---QNELI--MKG--------------------VTTLDVEVACLDISPLGDGVTTSEYIA 557
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D T R++ +PDL+E+ G P S G+
Sbjct: 558 VGLWTDITARILR--------------IPDLSEATKEYLGGEIIPRSVLMTCFE---GHS 600
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ V + +G LSD + LG++P L R
Sbjct: 601 YLLCALGDGSMFYFVFHKDTGTLSDKKRVTLGTQPTVLRTFR 642
>gi|407044064|gb|EKE42344.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
Length = 1145
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 74/294 (25%)
Query: 1 EFDAYIVVSFSNATLVLSIGE-TVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E+ Y+ +S+SN T +L I E + E + S +TP+L S + D + +QV D I
Sbjct: 459 EYHQYLAISYSNITTLLKITEDEMSECTTSPILLSTPSLLVSMLFDGTFLQVMTDRIIIY 518
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGR---LIYFEM---HPVSDKKESD 113
+ D+K V + N +++++++ LIYF+ H ++ +++ +
Sbjct: 519 SEPIQQFITEDQK------YVCASCNGSELIVSVEKNNQTSLIYFQYQSGHLLTMERKDN 572
Query: 114 KKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGE 173
KI A++Q HP
Sbjct: 573 LSKITALALDQ----------------FHP------------------------------ 586
Query: 174 QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
S+ A+G D +V L+SL P + K + L S+ + D TS
Sbjct: 587 --SKHCAIGCIDGSVHLLSLIPNETTKALSRVSLQTYECSINSLTFNIIDNTS------- 637
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
YL+ GL NG L R V D SG+++++ + ++GSRPV L ++ G ++
Sbjct: 638 ------YLFAGLSNGLLGRSVYDPISGEINESSLNFVGSRPVTLSNVKDCGEDS 685
>gi|385305455|gb|EIF49426.1| nuclear mrna splicing [Dekkera bruxellensis AWRI1499]
Length = 570
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 37/217 (17%)
Query: 3 DAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAK 62
D I +SF + TL+L IGE VEE +GF TL + +G+ S+VQVY DG R I
Sbjct: 130 DKLIALSFYDETLLLKIGEEVEEAENTGFKTDVATLAXAQLGNGSVVQVYADGXRQIFYD 189
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
+ D K D D K +++ AV
Sbjct: 190 D------DDKPVD------------------------------TVDWKAPVGIEVLHGAV 213
Query: 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
++ Q+V+AL + YFE+ + ++ E E ++ S++ + L G + F+ G
Sbjct: 214 SETQVVLALSSREIAYFEVDEQDRLI-EYGERKELGSQITSLCLGELSGGHKRFPFIFAG 272
Query: 183 LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEM 219
+ T+ ++ P L + Q L + SL M
Sbjct: 273 GKNQTLTVLKTDPSSTLDVVSKQDLSSVPTSLAAFSM 309
>gi|444319478|ref|XP_004180396.1| hypothetical protein TBLA_0D03780 [Tetrapisispora blattae CBS 6284]
gi|387513438|emb|CCH60877.1| hypothetical protein TBLA_0D03780 [Tetrapisispora blattae CBS 6284]
Length = 1330
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 26/168 (15%)
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETG----ILDECSETIQMESEVLCMALSNAPS 171
KIVR + Q+ +AL ++YFE++ ET + E I+M S +L M++ S
Sbjct: 581 KIVRATNTKTQLALALSNNEIVYFEINTETSSNSDTMHELQLHIEMTSSILSMSMGTGMS 640
Query: 172 GEQMSRFLAVGLADNTVRLISLA--PQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDE 229
S FLAVG D+ V +ISL + L+ ++Q L LV++
Sbjct: 641 ----SDFLAVGCDDSVVSIISLKKLSDEFLEIVSIQSLLSSPTDLVLLHFK--------- 687
Query: 230 PAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
G + L++G +NG +R ++ T+G + D +++YLG+ + L
Sbjct: 688 -------GKIQLHIGQENGVYVRSSINPTNGQIFDVKLKYLGTTALNL 728
>gi|67472417|ref|XP_652013.1| splicing factor 3B subunit 3 [Entamoeba histolytica HM-1:IMSS]
gi|56468814|gb|EAL46625.1| splicing factor 3B subunit 3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709507|gb|EMD48761.1| premRNA-splicing factor rse-1, putative [Entamoeba histolytica
KU27]
Length = 1145
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 74/294 (25%)
Query: 1 EFDAYIVVSFSNATLVLSIGE-TVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E+ Y+ +S+SN T +L I E + E + S +TP+L S + D + +QV D I
Sbjct: 459 EYHQYLAISYSNITTLLKITEDEMSECTTSPILLSTPSLLVSMLFDGTFLQVMTDRIIIY 518
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGR---LIYFEM---HPVSDKKESD 113
+ D+K V + N +++++++ LIYF+ H ++ +++ +
Sbjct: 519 SEPIQQFITEDQK------YVCASCNGCELIVSVEKNNQTSLIYFQYQSGHLLTMERKDN 572
Query: 114 KKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGE 173
KI A++Q HP
Sbjct: 573 LSKITALALDQ----------------FHP------------------------------ 586
Query: 174 QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
S+ A+G D +V L+SL P + K + L S+ + D TS
Sbjct: 587 --SKHCAIGCIDGSVHLLSLIPNETTKALSRVSLQTYECSINSLTFNIIDNTS------- 637
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
YL+ GL NG L R V D SG+++++ + ++GSRPV L ++ G ++
Sbjct: 638 ------YLFAGLSNGLLGRSVYDPISGEINESSLNFVGSRPVTLSNVKDCGEDS 685
>gi|327278830|ref|XP_003224163.1| PREDICTED: DNA damage-binding protein 1-like [Anolis carolinensis]
Length = 1140
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 115/284 (40%), Gaps = 64/284 (22%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF T C + ++Q+ +R
Sbjct: 420 ETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVR-- 477
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
V Q + VS+ KE + K I
Sbjct: 478 -----------------------LVTQEPKAL--------------VSEWKEPNGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYF-EMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ N Q+V+A+ GR++Y+ E+HP+ C+E ME EV C+ ++ MS
Sbjct: 501 ASCNSSQVVVAV--GRVLYYLEIHPQELKQISCTE---MEHEVACLDITPLGDASGMSPL 555
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
A+GL D + R++ L D L ++ L G + S++M S
Sbjct: 556 CAIGLWTDISARILKLPSFDLLHKEMLGG-EIIPRSILMTTFENSH-------------- 600
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 --YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|145351726|ref|XP_001420218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580451|gb|ABO98511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1120
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 117/285 (41%), Gaps = 73/285 (25%)
Query: 1 EFDAYIVVSFSNATLVLSI----GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGI 56
+ D Y+VV+F N T +L G+T++E +GF TLCC M N +QV G+
Sbjct: 441 QMDKYLVVTFINETRILGFVGDEGDTLDETEIAGFDAEAQTLCCGNMQGNVFLQVTHRGV 500
Query: 57 RHI---GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESD 113
R + G WK D E I+ N QI++A GG+L +
Sbjct: 501 RLVSRGGDLLDEWKPKDGAE-----ILSAKCNPTQILVAAAGGQLHCLNVA--------- 546
Query: 114 KKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGE 173
K KIV A S+T E+E+ C L P G+
Sbjct: 547 KGKIVLLA------------------------------SKT--FENEIAC--LDCTPMGD 572
Query: 174 QMSR-FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAG 232
MS AVGL + L S++ + +++ D+ ++ + D P
Sbjct: 573 GMSSPVCAVGLWSMDIVLASMSDLSVITKESTD--EDIIPRSTLL------CSFEDIP-- 622
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL+VGL +G L+ V+DQ +G LS + LG++P+ L
Sbjct: 623 -------YLFVGLGDGQLITYVLDQNTGALSGRKKLSLGTKPITL 660
>gi|223647932|gb|ACN10724.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 65/284 (22%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ G+R
Sbjct: 420 ETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNLQTFYCGNVAHQQLIQITSGGVR-- 477
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ +Q + + VS+ KE + I
Sbjct: 478 -------------------------------LVMQDSKAL------VSEWKEPQGRNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQM-SRF 178
A N Q+V+A+ GR +Y+ + +G L + S T++ME EV C+ ++ P GE S
Sbjct: 501 AACNSSQVVLAV--GRALYY-LQILSGELKQIS-TVEMEHEVACLDIT--PLGEDGDSPL 554
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVGL D + R++ L L ++ L G + S++M AS
Sbjct: 555 CAVGLWTDISARVLKLPCFTALHKEMLGG-EIIPRSILMTTFEAS--------------- 598
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL +D TSG LS+ + LG++P L R
Sbjct: 599 -YYLLCALGDGALFYFGLDLTSGVLSERKKVTLGTQPTVLRTFR 641
>gi|440893607|gb|ELR46310.1| DNA damage-binding protein 1 [Bos grunniens mutus]
Length = 1143
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 111/282 (39%), Gaps = 60/282 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ MS
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGMSPLC 556
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
A+GL + I+ P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARIAKLPSFELLHKEMLGGEIIPRSILMTTFESSH---------------- 600
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|122692537|ref|NP_001073731.1| DNA damage-binding protein 1 [Bos taurus]
gi|426251842|ref|XP_004019630.1| PREDICTED: DNA damage-binding protein 1 [Ovis aries]
gi|134034086|sp|A1A4K3.1|DDB1_BOVIN RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|119223918|gb|AAI26630.1| Damage-specific DNA binding protein 1, 127kDa [Bos taurus]
gi|296471644|tpg|DAA13759.1| TPA: DNA damage-binding protein 1 [Bos taurus]
Length = 1140
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 111/282 (39%), Gaps = 60/282 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ MS
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGMSPLC 556
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
A+GL + I+ P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARIAKLPSFELLHKEMLGGEIIPRSILMTTFESSH---------------- 600
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|311247551|ref|XP_003122699.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Sus scrofa]
Length = 1140
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 111/282 (39%), Gaps = 60/282 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSNQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
A+GL + IS P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARISKLPSFELLHKEMLGGEIIPRSILMTTFESSH---------------- 600
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|45383688|ref|NP_989547.1| DNA damage-binding protein 1 [Gallus gallus]
gi|82098863|sp|Q805F9.1|DDB1_CHICK RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=UV-damaged DNA-binding factor
gi|28375613|dbj|BAC56999.1| damaged-DNA binding protein DDB p127 subunit [Gallus gallus]
gi|53130071|emb|CAG31438.1| hypothetical protein RCJMB04_6h2 [Gallus gallus]
Length = 1140
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 112/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF T C + ++Q+ +R +
Sbjct: 420 EMDNMLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE + K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPNGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y E+ P+ C+E ME EV C+ ++ MS
Sbjct: 501 ASCNSNQVVVAV-GRALYYLEIRPQELRQINCTE---MEHEVACLDITPLGDTNGMSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL + +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|68060004|ref|XP_671977.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56488645|emb|CAI04030.1| hypothetical protein PB301494.00.0 [Plasmodium berghei]
Length = 346
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
E+D YI+VSF TL+L IGETVEEV S T+ + + DNS +QVY GIRHI
Sbjct: 257 EYDGYIIVSFEGNTLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTGIRHIN 316
Query: 61 AK 62
K
Sbjct: 317 GK 318
>gi|255712143|ref|XP_002552354.1| KLTH0C02904p [Lachancea thermotolerans]
gi|238933733|emb|CAR21916.1| KLTH0C02904p [Lachancea thermotolerans CBS 6340]
Length = 1288
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETG--ILDECSETIQMESEVLCMALSNAPSGE 173
KIV + Q+ + L +++FE+ G +L+E + ++M ++ ++L
Sbjct: 570 KIVEATCSSTQLALGLSNNEIVWFELDTSNGGEVLNEYQDRVEMPDKITALSLPQTFK-- 627
Query: 174 QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
S FLAVG D++V++I L D ++ +++ S P+ +
Sbjct: 628 --SDFLAVGCQDSSVKIIGLKSTS----------RDSFLEVLSMQVVLSPPS---DLKLV 672
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
+ G L+L++GL G +R +D+T G L D R +YLGS+PVK+
Sbjct: 673 YSKGLLFLHLGLDAGVYIRSNIDKTDGQLFDIRTKYLGSKPVKV 716
>gi|345328202|ref|XP_003431248.1| PREDICTED: DNA damage-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 1045
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 111/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF T C + ++Q+ +R
Sbjct: 325 ETDDTLVLSFVGQTRVLMLNGEEVEETELTGFVDNQQTFFCGNVAHQQLIQITSASVR-- 382
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
V Q + VS+ KE K I
Sbjct: 383 -----------------------LVTQEPKAL--------------VSEWKEPQGKNISV 405
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP L + S T +ME EV C+ ++ MS
Sbjct: 406 ASCNSSQVVVAV-GRALYYLQIHPRE--LRQISHT-EMEHEVACLDITPLGDSHGMSPLC 461
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 462 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 505
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL + +G LSD + LG++P L R
Sbjct: 506 -YLLCALGDGALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFR 547
>gi|241260143|ref|XP_002404926.1| DNA repair protein xp-E, putative [Ixodes scapularis]
gi|215496735|gb|EEC06375.1| DNA repair protein xp-E, putative [Ixodes scapularis]
Length = 1148
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 64/281 (22%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D +V+SF T VL + GE VEE +GF + T C + +N ++QV +R +
Sbjct: 424 DNTLVLSFVGQTRVLMLSGEEVEETELAGFDISQQTFFCGNVRNNQLIQVTAAAVRLVDG 483
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
K T +++ K K I NQ Q+V CA
Sbjct: 484 K-TKLLLNEWKPPGGKNISVVTCNQNQVV-----------------------------CA 513
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
V Q + + G L + + +ME+EV C+ ++ G S AV
Sbjct: 514 VRQEVFCLEIADGTL-------------KQTSNAEMENEVACLDITPLNDGSGKSDLCAV 560
Query: 182 GL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
GL D ++R++ L + L+++N+ G + S++M G Y
Sbjct: 561 GLWTDISIRVLRLPSLEQLQKENIGG-EIIPRSILMTTFE----------------GVHY 603
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRP--VKLFK 279
L L +G+L ++D ++G +SD + LG++P +K FK
Sbjct: 604 LLCALGDGSLFYFLLDASTGAVSDRKKVTLGTQPTVLKTFK 644
>gi|194381178|dbj|BAG64157.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 106 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 165
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 166 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 186
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 187 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 242
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 243 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 286
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 287 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 328
>gi|224050582|ref|XP_002191856.1| PREDICTED: DNA damage-binding protein 1 [Taeniopygia guttata]
Length = 1140
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 110/283 (38%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF T C + ++Q+ +R +
Sbjct: 420 ETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ + VS+ KE + K I
Sbjct: 480 SQEPKSL---------------------------------------VSEWKEPNGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y E+ P+ C+E ME EV C+ ++ MS
Sbjct: 501 ASCNSNQVVVAV-GRALYYLEIRPQELRQISCTE---MEHEVACLDITPLGDSNGMSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL + +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|326919947|ref|XP_003206238.1| PREDICTED: DNA damage-binding protein 1-like [Meleagris gallopavo]
Length = 1079
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF T C + ++Q+ +R +
Sbjct: 359 EMDNMLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLV 418
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE + K I
Sbjct: 419 --------------SQEPKAL-------------------------VSEWKEPNGKNISV 439
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y E+ P+ C+E ME EV C+ ++ MS
Sbjct: 440 ASCNSNQVVVAV-GRALYYLEIRPQELRQINCTE---MEHEVACLDITPLGDTNGMSPLC 495
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L + L ++ L G + S++M +S
Sbjct: 496 AIGLWTDISARILKLPSFEMLHKEMLGG-EIIPRSILMTTFESSH--------------- 539
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL + +G LSD + LG++P L R
Sbjct: 540 -YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFR 581
>gi|359546285|pdb|4A11|A Chain A, Structure Of The Hsddb1-Hscsa Complex
gi|361132519|pdb|4A0K|C Chain C, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 1159
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 439 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 498
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 499 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 519
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 520 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 575
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 576 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 619
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 620 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 661
>gi|197097564|ref|NP_001126613.1| DNA damage-binding protein 1 [Pongo abelii]
gi|75041202|sp|Q5R649.1|DDB1_PONAB RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|55732122|emb|CAH92767.1| hypothetical protein [Pongo abelii]
Length = 1140
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|403255013|ref|XP_003920244.1| PREDICTED: DNA damage-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 1140
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|361132523|pdb|4A0L|A Chain A, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
gi|361132525|pdb|4A0L|C Chain C, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 1144
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 424 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 483
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 484 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 504
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 505 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 560
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 561 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 604
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 605 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 646
>gi|221046711|pdb|3EI1|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4
Photoproduct Containing Dna-Duplex
gi|221046715|pdb|3EI2|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Abasic Site
Containing Dna-Duplex
gi|221046719|pdb|3EI3|A Chain A, Structure Of The Hsddb1-Drddb2 Complex
Length = 1158
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 438 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 497
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 498 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 518
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 519 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 574
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 575 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 618
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 619 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 660
>gi|441604084|ref|XP_004087862.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
[Nomascus leucogenys]
Length = 1140
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|418316|sp|P33194.1|DDB1_CERAE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=DDBa; AltName:
Full=Damage-specific DNA-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1; Short=UV-DDB 1
gi|304026|gb|AAA03021.1| UV-damaged DNA-binding protein [Chlorocebus aethiops]
Length = 1140
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|221040048|dbj|BAH11787.1| unnamed protein product [Homo sapiens]
Length = 1092
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|119594339|gb|EAW73933.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_a [Homo
sapiens]
Length = 1094
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|148529014|ref|NP_001914.3| DNA damage-binding protein 1 [Homo sapiens]
gi|296218432|ref|XP_002807395.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
[Callithrix jacchus]
gi|397516558|ref|XP_003828491.1| PREDICTED: DNA damage-binding protein 1 [Pan paniscus]
gi|402893195|ref|XP_003909786.1| PREDICTED: DNA damage-binding protein 1 [Papio anubis]
gi|426368721|ref|XP_004051351.1| PREDICTED: DNA damage-binding protein 1 [Gorilla gorilla gorilla]
gi|12643730|sp|Q16531.1|DDB1_HUMAN RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=DNA damage-binding protein a;
Short=DDBa; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=HBV X-associated protein 1;
Short=XAP-1; AltName: Full=UV-damaged DNA-binding
factor; AltName: Full=UV-damaged DNA-binding protein 1;
Short=UV-DDB 1; AltName: Full=XPE-binding factor;
Short=XPE-BF; AltName: Full=Xeroderma pigmentosum group
E-complementing protein; Short=XPCe
gi|203282525|pdb|3E0C|A Chain A, Crystal Structure Of Dna Damage-Binding Protein 1(Ddb1)
gi|695362|gb|AAA62838.1| X-associated protein 1, partial [Homo sapiens]
gi|1052865|gb|AAC50349.1| DDBa p127 [Homo sapiens]
gi|15079750|gb|AAH11686.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|29792243|gb|AAH50530.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|30354567|gb|AAH51764.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|61354161|gb|AAX44048.1| damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
gi|119594341|gb|EAW73935.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_c [Homo
sapiens]
gi|168275638|dbj|BAG10539.1| DNA damage-binding protein 1 [synthetic construct]
gi|189065506|dbj|BAG35345.1| unnamed protein product [Homo sapiens]
gi|355566436|gb|EHH22815.1| Damage-specific DNA-binding protein 1 [Macaca mulatta]
gi|380784123|gb|AFE63937.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|380808126|gb|AFE75938.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|380810144|gb|AFE76947.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|383408123|gb|AFH27275.1| DNA damage-binding protein 1 [Macaca mulatta]
gi|410305600|gb|JAA31400.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
gi|410352015|gb|JAA42611.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
Length = 1140
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|400260815|pdb|4E54|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
gi|401871507|pdb|4E5Z|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
Length = 1150
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 430 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 489
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 490 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 510
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 511 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 566
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 567 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 610
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 611 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 652
>gi|358440058|pdb|4A08|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex (
Purine At D-1 Position) At 3.0 A Resolution (Cpd 1)
gi|358440062|pdb|4A09|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex
(Purine At D-1 Position) At 3.1 A Resolution (Cpd 2)
Length = 1159
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 439 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 498
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 499 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 519
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 520 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 575
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 576 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 619
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 620 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 661
>gi|119594342|gb|EAW73936.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_d [Homo
sapiens]
Length = 1146
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|297267724|ref|XP_001082958.2| PREDICTED: DNA damage-binding protein 1 [Macaca mulatta]
Length = 1092
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|384941436|gb|AFI34323.1| DNA damage-binding protein 1 [Macaca mulatta]
Length = 1140
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|358440066|pdb|4A0A|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3)
Length = 1159
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 439 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 498
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 499 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 519
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 520 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 575
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 576 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 619
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 620 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 661
>gi|410045300|ref|XP_508472.4| PREDICTED: DNA damage-binding protein 1 [Pan troglodytes]
Length = 1107
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 427 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 486
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 487 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 507
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 508 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 563
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 564 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 607
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 608 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 649
>gi|358440070|pdb|4A0B|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
gi|358440072|pdb|4A0B|C Chain C, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
Length = 1159
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 439 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 498
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 499 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 519
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 520 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 575
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 576 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 619
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 620 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 661
>gi|119594343|gb|EAW73937.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_e [Homo
sapiens]
Length = 896
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 176 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 235
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 236 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 256
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 257 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 312
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 313 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 356
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 357 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 398
>gi|119594340|gb|EAW73934.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_b [Homo
sapiens]
Length = 923
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 203 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 262
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 263 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 283
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 284 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 339
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 340 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 383
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 384 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 425
>gi|16197726|emb|CAC94909.1| damaged-DNA recognition protein 1 [Mus musculus]
Length = 994
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPRAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKMTLGTQPTVLRTFR 642
>gi|355752055|gb|EHH56175.1| Damage-specific DNA-binding protein 1, partial [Macaca
fascicularis]
Length = 1125
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 405 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 464
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 465 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 485
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 486 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 541
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 542 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 585
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 586 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 627
>gi|355683071|gb|AER97036.1| damage-specific DNA binding protein 1, 127kDa [Mustela putorius
furo]
Length = 1122
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|357135348|ref|XP_003569272.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1074
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 63/285 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D ++VV+F N T L +++ +EEV GF T TL C + N ++QV +R +
Sbjct: 411 YDTFLVVTFINETHFLAMNMENELEEVDIKGFDSETQTLACGSAIHNQLIQVTSRSVRLV 470
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ + ++ D+ + + V A
Sbjct: 471 SS--VSLELLDQWFAPARFSVNVA------------------------------------ 492
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
A N Q+++A L+Y E+ + + IQ+E E+ C+ ++ Q S
Sbjct: 493 -AANANQVLLATGNCHLVYLEITSSKIV---PVKHIQLEHEISCLDINPIGENPQYSSLA 548
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL +++++L + + L IE +
Sbjct: 549 AVGMWTDISVRIFSLPGLKLIRKEHLGEVVPRSVLLCTIEAVS----------------- 591
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
YL+ GL +G L V++ ++ +LSD R LG++P+ L Q
Sbjct: 592 -YLFCGLGDGHLFSFVLNSSTCELSDRRRVSLGAQPISLHIFSSQ 635
>gi|70929379|ref|XP_736760.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511568|emb|CAH82825.1| hypothetical protein PC300187.00.0 [Plasmodium chabaudi chabaudi]
Length = 289
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 35/176 (19%)
Query: 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEV---LCMALSNAPSGEQMSRFL 179
N QIV +L GG L+YF +DE S T+++ + LC+++ + + FL
Sbjct: 19 NGSQIVGSLTGGELLYF--------IDE-SHTLEIFKNINVILCLSVQHIQLYILRASFL 69
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLA--ESLVMIEMGASDPTSSDEPAGPVTLG 237
+G DN VRL+S+ KQ + LP+ + + + + EM LG
Sbjct: 70 -LGCLDNVVRLLSIEKDQYFKQLSTYILPNNSSPQDICISEMKE--------------LG 114
Query: 238 N------LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
N LYL +GL G LLR V+D G LS++ +YLG++ VK+ ++ N A
Sbjct: 115 NQKEHTILYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICHVQVNKNPA 170
>gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|194389106|dbj|BAG61570.1| unnamed protein product [Homo sapiens]
Length = 1009
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 289 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 348
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 349 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 369
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 370 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 425
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 426 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 469
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 470 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 511
>gi|7657011|ref|NP_056550.1| DNA damage-binding protein 1 [Mus musculus]
gi|134034087|sp|Q3U1J4.2|DDB1_MOUSE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
subunit; AltName: Full=Damage-specific DNA-binding
protein 1; AltName: Full=UV-damaged DNA-binding factor
gi|5931596|dbj|BAA84699.1| XPE UV-damaged DNA binding factor [Mus musculus]
gi|16307148|gb|AAH09661.1| Damage specific DNA binding protein 1 [Mus musculus]
gi|74182145|dbj|BAE34102.1| unnamed protein product [Mus musculus]
gi|74196166|dbj|BAE32993.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|410974071|ref|XP_003993471.1| PREDICTED: DNA damage-binding protein 1 [Felis catus]
Length = 1193
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 473 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 532
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 533 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 553
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 554 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 609
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 610 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 653
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 654 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 695
>gi|431910407|gb|ELK13480.1| DNA damage-binding protein 1 [Pteropus alecto]
Length = 1143
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|444513057|gb|ELV10249.1| DNA damage-binding protein 1 [Tupaia chinensis]
Length = 1146
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSSGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1090
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 62/285 (21%)
Query: 2 FDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D ++VVSF + T +L++ + +EE GF TL C + +VQV +R +
Sbjct: 413 YDTFLVVSFISETRILAMNTDDELEETEIDGFDSEAQTLFCYNAVHDQLVQVTAGSLRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
AK +RQ+ ++ K I
Sbjct: 473 DAKT----------------------RRQL-----------------TEWKAPAPMTINV 493
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L E + +Q+E E+ C+ ++ + S +
Sbjct: 494 ATANASQVLLATGGGNLVYIEIG--QGTLVEVAH-VQLEYEISCLDINPVGDNPERSNLV 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D ++R+ +L P L K + G + S++ G
Sbjct: 551 AVGMWTDISIRIFAL-PSLTLITKEMLGGEIIPRSVLFCSFD----------------GI 593
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
YL L +G L ++ +G+LSD + LG++P+ L R +
Sbjct: 594 AYLLCALGDGHLFNFTLNPATGELSDRKKISLGTQPIALRTFRSK 638
>gi|449283451|gb|EMC90093.1| DNA damage-binding protein 1 [Columba livia]
Length = 1140
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 112/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF T C + ++Q+ +R +
Sbjct: 409 ETDNMLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLV 468
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE + K I
Sbjct: 469 --------------SQEPKAL-------------------------VSEWKEPNGKNISV 489
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y E+ P+ C+E ME EV C+ ++ MS
Sbjct: 490 ASCNSSQVVVAV-GRALYYLEIRPQELRQISCTE---MEHEVACLDITPLGDTNGMSPLC 545
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 546 AIGLWTDISARILRL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 589
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL + +G LSD + LG++P L R
Sbjct: 590 -YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFR 631
>gi|354504619|ref|XP_003514371.1| PREDICTED: DNA damage-binding protein 1-like [Cricetulus griseus]
gi|344258340|gb|EGW14444.1| DNA damage-binding protein 1 [Cricetulus griseus]
Length = 1140
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|413081953|ref|NP_741992.2| DNA damage-binding protein 1 [Rattus norvegicus]
gi|293344614|ref|XP_002725831.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
gi|293356422|ref|XP_002728912.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
gi|149062405|gb|EDM12828.1| damage-specific DNA binding protein 1 [Rattus norvegicus]
Length = 1140
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGESNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|73983859|ref|XP_533275.2| PREDICTED: DNA damage-binding protein 1 [Canis lupus familiaris]
gi|291409601|ref|XP_002721069.1| PREDICTED: damage-specific DNA binding protein 1 [Oryctolagus
cuniculus]
gi|301781686|ref|XP_002926259.1| PREDICTED: DNA damage-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 1140
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|281345356|gb|EFB20940.1| hypothetical protein PANDA_015888 [Ailuropoda melanoleuca]
Length = 1124
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 402 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 461
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 462 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 482
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 483 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 538
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 539 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 582
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 583 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 624
>gi|148709424|gb|EDL41370.1| damage specific DNA binding protein 1 [Mus musculus]
Length = 968
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|432089478|gb|ELK23419.1| DNA damage-binding protein 1 [Myotis davidii]
Length = 1047
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 64/284 (22%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELTGFVDEQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
D K +V S+ KE K I
Sbjct: 480 S-------------QDPKALV--------------------------SEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIY-FEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ N Q+V+A+ GR +Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV--GRALYCLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPL 555
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 556 CAIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH-------------- 600
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 --YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|395852550|ref|XP_003798801.1| PREDICTED: DNA damage-binding protein 1 [Otolemur garnettii]
Length = 1140
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVR-- 477
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ Q + + VS+ KE K I
Sbjct: 478 -------------------------------LVCQEPKAL------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ MS
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGMSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|259155222|ref|NP_001158852.1| DNA damage-binding protein 1 [Salmo salar]
gi|223647700|gb|ACN10608.1| DNA damage-binding protein 1 [Salmo salar]
Length = 1139
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ G+R
Sbjct: 420 ETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNLQTFYCGNVAHQQLIQITSGGVR-- 477
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ +Q + + VS+ KE + I
Sbjct: 478 -------------------------------LVMQDSKAL------VSEWKEPQGRNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
A N Q+V+A+ GR +Y+ + +G L + S T++ME EV C+ ++ G + S
Sbjct: 501 AACNSSQVVLAV--GRALYY-LQILSGELKQIS-TVEMEHEVACLDITPLGEGGE-SPLC 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + R++ L L ++ L G + S++M G
Sbjct: 556 AVGLWTDISARVLKLPCFTALHKEMLGG-EIIPRSILMTTFE----------------GG 598
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL +D T+G LS+ + LG++P L R
Sbjct: 599 YYLLCALGDGALFYFGLDLTTGVLSERKKVTLGTQPTVLRTFR 641
>gi|81868411|sp|Q9ESW0.1|DDB1_RAT RecName: Full=DNA damage-binding protein 1; AltName:
Full=Damage-specific DNA-binding protein 1
gi|9843869|emb|CAB89874.2| damage-specific DNA binding protein 1 [Rattus norvegicus]
Length = 1140
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPRAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDVTPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|5353754|gb|AAD42230.1|AF159853_1 damage-specific DNA binding protein 1 [Mus musculus]
Length = 1140
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSR--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|344295432|ref|XP_003419416.1| PREDICTED: DNA damage-binding protein 1 [Loxodonta africana]
Length = 1140
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAQQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K +
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNVSV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
Length = 1089
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 64/287 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D Y+VVSF + T L +++ + +EE GF T TL C ++ ++QV + +R
Sbjct: 414 YDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVR-- 471
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+V C R++V D+ + + V
Sbjct: 472 -------------------LVSCT--SRELV-----------------DQWNAPEGFSVN 493
Query: 120 CA-VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
A N Q+++A GG L+Y E+ ++ +++ + IQ+E E+ C+ L+ Q S
Sbjct: 494 VASANASQVLLATGGGHLVYLEI-KDSKLVE--VKHIQLEHEISCVDLNPIGENPQYSSL 550
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR++SL + ++++NL G L+ G S
Sbjct: 551 AAVGMWTDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVS--------------- 595
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +++ ++G+L+D + LG++P+ L +G
Sbjct: 596 --YLLCALGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKG 640
>gi|367015172|ref|XP_003682085.1| hypothetical protein TDEL_0F00630 [Torulaspora delbrueckii]
gi|359749747|emb|CCE92874.1| hypothetical protein TDEL_0F00630 [Torulaspora delbrueckii]
Length = 1254
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQM 175
+IV ++ Q+ I L ++YFE+ +G L E I+++ + +++ + +
Sbjct: 544 RIVCATSSETQLSIGLSNCEIVYFEI--TSGSLHESQNKIELDEPITSISMVRS----KR 597
Query: 176 SRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235
S +LAVG D+TV+LISL D + + + + + +++ +
Sbjct: 598 SDYLAVGSNDSTVKLISLKRSDMDEFMEIVSIQTVLAPVTDLKL--------------IQ 643
Query: 236 LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
NL L++GL+NG R +V+ G L D R ++LG RPV L
Sbjct: 644 DSNLELHIGLENGVYCRSMVNNNDGQLYDVRTKFLGPRPVTL 685
>gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens]
Length = 1140
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQAKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-GMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|167395195|ref|XP_001741266.1| pre-mRNA-splicing factor rse-1 [Entamoeba dispar SAW760]
gi|165894222|gb|EDR22283.1| pre-mRNA-splicing factor rse-1, putative [Entamoeba dispar SAW760]
Length = 1145
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 120/294 (40%), Gaps = 74/294 (25%)
Query: 1 EFDAYIVVSFSNATLVLSIGE-TVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E+ Y+ +S+SN T +L I E + E + + +TP+L S + D + +QV D I
Sbjct: 459 EYHQYLAISYSNITTLLKITEDEMSECNTTPILLSTPSLLVSMLSDGTFLQVMTDRIIVY 518
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGR---LIYFEM---HPVSDKKESD 113
+ ++ +K V + N +++++++ LIYF+ H ++ +++ +
Sbjct: 519 SEPIQQFI------TENQKYVCASCNGSELIVSVEKNNQTALIYFQYQSGHLLTMERKEN 572
Query: 114 KKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGE 173
KI A++Q HP
Sbjct: 573 LAKITALALDQ----------------FHP------------------------------ 586
Query: 174 QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
S+ A+G D +V L+SL P + K + L S+ + D S
Sbjct: 587 --SQHCAIGCVDGSVHLLSLIPNETTKALSRVSLQTYDCSVNSLTFNIIDNKS------- 637
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
YL+ GL NG L R D SG+++++ + ++GSRPV L ++ G ++
Sbjct: 638 ------YLFAGLSNGLLGRSTYDPISGEINESSLNFVGSRPVTLSNVKDCGEDS 685
>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
Length = 1090
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 64/287 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D Y+VVSF + T L +++ + +EE GF T TL C ++ ++QV + +R
Sbjct: 414 YDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVR-- 471
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+V C R++V D+ + + V
Sbjct: 472 -------------------LVSCT--SRELV-----------------DQWNAPEGFSVN 493
Query: 120 CA-VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
A N Q+++A GG L+Y E+ ++ +++ + IQ+E E+ C+ L+ Q S
Sbjct: 494 VASANASQVLLATGGGHLVYLEI-KDSKLVE--VKHIQLEHEISCVDLNPIGENPQYSSL 550
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR++SL + ++++NL G L+ G S
Sbjct: 551 AAVGMWTDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVS--------------- 595
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +++ ++G+L+D + LG++P+ L +G
Sbjct: 596 --YLLCALGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKG 640
>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
Length = 1089
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 62/285 (21%)
Query: 2 FDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T +L++ + +EE GF TL C + I+QV +R +
Sbjct: 413 FDIFLVVSFISETRILAMNMDDELEETEIEGFDSEAQTLFCHNAIHDQIIQVTSTSLRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
A ++RQ+ ++ + I
Sbjct: 473 DA----------------------TSRRQL-----------------TEWRTPSGVAINV 493
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L E +Q+++E+ C+ ++ + S
Sbjct: 494 ATANASQVLLATGGGNLVYIEIG--RGSLTEVKH-VQLQNEISCLDINPIGTDPDRSNIA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +V++ SL + L +++L G L+ G S
Sbjct: 551 AVGMWTDISVQVFSLPNLEVLAKESLGGEIIPRSVLICAFEGVS---------------- 594
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
YL L +G L ++D ++G LSD + LG++P+ L R +
Sbjct: 595 -YLLCALGDGHLFNFLIDTSTGQLSDRKKISLGTQPIMLRTFRSK 638
>gi|348560393|ref|XP_003465998.1| PREDICTED: DNA damage-binding protein 1-like [Cavia porcellus]
Length = 1140
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELVGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSCGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILQL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|90108797|pdb|2B5L|A Chain A, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
Protein
gi|90108798|pdb|2B5L|B Chain B, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
Protein
gi|90108801|pdb|2B5M|A Chain A, Crystal Structure Of Ddb1
gi|116667897|pdb|2HYE|A Chain A, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
gi|1136228|gb|AAA88883.1| UV-damaged DNA binding factor [Homo sapiens]
gi|1588524|prf||2208446A xeroderma pigmentosum group E-binding factor
Length = 1140
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 112/278 (40%), Gaps = 62/278 (22%)
Query: 6 IVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
+V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 425 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV----- 479
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
S + K + VS+ KE K I + N
Sbjct: 480 ---------SQEPKAL-------------------------VSEWKEPQAKNISVASCNS 505
Query: 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL- 183
Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S A+GL
Sbjct: 506 SQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLW 561
Query: 184 ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYV 243
D + R++ L P L K + G + S++M +S YL
Sbjct: 562 TDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH----------------YLLC 604
Query: 244 GLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
L +GAL ++ +G LSD + LG++P L R
Sbjct: 605 ALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|221046721|pdb|3EI4|A Chain A, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046723|pdb|3EI4|C Chain C, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046725|pdb|3EI4|E Chain E, Structure Of The Hsddb1-Hsddb2 Complex
Length = 1158
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 112/278 (40%), Gaps = 62/278 (22%)
Query: 6 IVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
+V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 443 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV----- 497
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
S + K + VS+ KE K I + N
Sbjct: 498 ---------SQEPKAL-------------------------VSEWKEPQAKNISVASCNS 523
Query: 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL- 183
Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S A+GL
Sbjct: 524 SQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLW 579
Query: 184 ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYV 243
D + R++ L P L K + G + S++M +S YL
Sbjct: 580 TDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH----------------YLLC 622
Query: 244 GLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
L +GAL ++ +G LSD + LG++P L R
Sbjct: 623 ALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 660
>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
Length = 1089
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 62/285 (21%)
Query: 2 FDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T +L++ + +EE GF TL C + I+QV +R +
Sbjct: 413 FDIFLVVSFISETRILAMNMDDELEETEIEGFDSEAQTLFCHNAIHDQIIQVTSTSLRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
A ++RQ+ ++ + I
Sbjct: 473 DA----------------------TSRRQL-----------------TEWRTPSAVAINV 493
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L E +Q+++E+ C+ ++ + S
Sbjct: 494 ATANASQVLLATGGGNLVYIEIG--RGSLTEVKH-VQLQNEISCLDINPIGTDPDRSNIA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +V++ SL + L +++L G L+ G S
Sbjct: 551 AVGMWTDISVQVFSLPNLEVLAKESLGGEIIPRSVLICAFEGVS---------------- 594
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
YL L +G L ++D ++G LSD + LG++P+ L R +
Sbjct: 595 -YLLCALGDGHLFNFLIDTSNGQLSDRKKISLGTQPIMLRTFRSK 638
>gi|90108802|pdb|2B5N|A Chain A, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108803|pdb|2B5N|B Chain B, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108804|pdb|2B5N|C Chain C, Crystal Structure Of The Ddb1 Bpb Domain
gi|90108805|pdb|2B5N|D Chain D, Crystal Structure Of The Ddb1 Bpb Domain
Length = 323
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 112/278 (40%), Gaps = 62/278 (22%)
Query: 6 IVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
+V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 39 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV----- 93
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
S + K + VS+ KE K I + N
Sbjct: 94 ---------SQEPKAL-------------------------VSEWKEPQAKNISVASCNS 119
Query: 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL- 183
Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S A+GL
Sbjct: 120 SQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLW 175
Query: 184 ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYV 243
D + R++ L P L K + G + S++M +S YL
Sbjct: 176 TDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH----------------YLLC 218
Query: 244 GLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
L +GAL ++ +G LSD + LG++P L R
Sbjct: 219 ALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 256
>gi|270346571|pdb|3I7H|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Hbx
gi|270346573|pdb|3I7K|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Whx
gi|270346575|pdb|3I7L|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Ddb2
gi|270346577|pdb|3I7N|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdtc1
gi|270346579|pdb|3I7O|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Iqwd1
gi|270346581|pdb|3I7P|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr40a
gi|270346583|pdb|3I89|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr22
gi|270346585|pdb|3I8C|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr21a
gi|270346587|pdb|3I8E|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr42a
gi|270346588|pdb|3I8E|B Chain B, Crystal Structure Of Ddb1 In Complex With The H-Box Motif
Of Wdr42a
Length = 1143
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 112/278 (40%), Gaps = 62/278 (22%)
Query: 6 IVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
+V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 428 LVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV----- 482
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
S + K + VS+ KE K I + N
Sbjct: 483 ---------SQEPKAL-------------------------VSEWKEPQAKNISVASCNS 508
Query: 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL- 183
Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S A+GL
Sbjct: 509 SQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLW 564
Query: 184 ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYV 243
D + R++ L P L K + G + S++M +S YL
Sbjct: 565 TDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH----------------YLLC 607
Query: 244 GLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
L +GAL ++ +G LSD + LG++P L R
Sbjct: 608 ALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 645
>gi|242089089|ref|XP_002440377.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
gi|241945662|gb|EES18807.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
Length = 1783
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 64/287 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D Y+VVSF + T L +++ + +EE GF T TL C ++ ++QV + +R
Sbjct: 414 YDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNATNDLLIQVTANSVR-- 471
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+V C R++V D+ + V
Sbjct: 472 -------------------LVSCT--SRELV-----------------DQWNAPAGFSVN 493
Query: 120 CA-VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
A N Q+++A GG L+Y E+ L E Q+E E+ C+ L+ Q S
Sbjct: 494 VASANASQVLLATGGGHLVYLEIRDSK--LVEVKHA-QLEHEISCLDLNPIGENPQYSSL 550
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR+ SL + ++++NL G L+ G S
Sbjct: 551 AAVGMWTDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVS--------------- 595
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +++ ++G+L+D + LG++P+ L +G
Sbjct: 596 --YLLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKG 640
>gi|348526664|ref|XP_003450839.1| PREDICTED: DNA damage-binding protein 1-like [Oreochromis
niloticus]
Length = 1140
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R
Sbjct: 420 ETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVR-- 477
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ LQ + + VS+ KE + I
Sbjct: 478 -------------------------------LVLQDSKTL------VSEWKEPQGRNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
A N Q+V+A+ GR +Y+ + G L + S T +ME EV C+ ++ G S
Sbjct: 501 AACNHTQVVLAV--GRALYY-LQILAGELKQIS-TTEMEHEVACLDITPLGEGGGESPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + R++ L L ++ L G + S++M G+
Sbjct: 557 AVGLWTDISARVLKLPCFTALHKEMLGG-EIIPRSILMTTFE----------------GS 599
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL +D +G LS+ + LG++P L R
Sbjct: 600 YYLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFR 642
>gi|170057515|ref|XP_001864517.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876915|gb|EDS40298.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1138
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 107/281 (38%), Gaps = 60/281 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+D +V+SF T +L + GE VEE GF T C+ + I+QV P R I
Sbjct: 422 YDNTLVLSFVGHTRILMLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQVTPMTARLIS 481
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N + + + K D K+I A N Q+V A R IY+
Sbjct: 482 CDNKSM-ICEWKPPDDKRIGVVACNSCQMVCAT--ARDIYY------------------- 519
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
I ++ G+L++ T+ ++ EV C+ +S S +A
Sbjct: 520 --------IEIEAGKLVH-------------KSTVTLDYEVACLDISPLDEPATRSELVA 558
Query: 181 VGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240
VGL I P K G + S++M G +Y
Sbjct: 559 VGLWTEISACILRLPNLEFVHKEKLGGEIIPRSILM----------------ACFEGIIY 602
Query: 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
L L +G++ VVD+T+ L+D + LG++P L R
Sbjct: 603 LLCALGDGSMFYFVVDKTTHRLTDQKKVTLGTQPTILKTFR 643
>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
Length = 1090
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 64/287 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D Y+VVSF + T L +++ + +EE GF T TL C ++ ++QV + +R
Sbjct: 414 YDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVR-- 471
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+V C R++V D+ + + V
Sbjct: 472 -------------------LVSCT--SRELV-----------------DQWNAPEGFSVN 493
Query: 120 CA-VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
A N Q+++A GG L+Y E+ ++ +++ + IQ+E E+ C+ L+ Q S
Sbjct: 494 VASANASQVLLATGGGHLVYLEI-KDSKLVE--VKHIQLEHEISCVDLNPIGENPQYSSL 550
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR++S + ++++NL G L+ G S
Sbjct: 551 AAVGMWTDISVRILSFPDLELIRKENLGGEIVPRSVLLCTLEGVS--------------- 595
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +++ ++G+L+D + LG++P+ L +G
Sbjct: 596 --YLLCALGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKG 640
>gi|238590334|ref|XP_002392284.1| hypothetical protein MPER_08162 [Moniliophthora perniciosa FA553]
gi|215458122|gb|EEB93214.1| hypothetical protein MPER_08162 [Moniliophthora perniciosa FA553]
Length = 276
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 235 TLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
T L++ +GLQNG LLR V+D +G L+D R R+LG+RP+KL +++ Q N A
Sbjct: 9 TQPTLFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLIRVQTQRNPA 61
>gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis]
Length = 953
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + N ++Q+ +R
Sbjct: 290 ETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHNQLIQITSGSVR-- 347
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ LQ + + VS+ +E + I
Sbjct: 348 -------------------------------LVLQDSKAL------VSEWREPQGRNISV 370
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
A N Q+V+A+ GR +Y+ + G L + S T +ME EV C+ ++ S
Sbjct: 371 AACNHTQVVLAV--GRALYY-LQILAGELKQIS-TTEMEHEVACLDITPLGEAGAESPLC 426
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + R++ L L ++ L G + S++M G+
Sbjct: 427 AVGLWTDISARVLKLPCFTALHKEMLGG-EIIPRSILMTTFE----------------GS 469
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL +D +G LS+ + LG++P L R
Sbjct: 470 YYLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFR 512
>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
Length = 1089
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 120/286 (41%), Gaps = 62/286 (21%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD Y+VVSF + T L +++ + +EE GF T TL C ++ ++QV + +R +
Sbjct: 414 FDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLV 473
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ R VNQ A G F ++ S
Sbjct: 474 SCTS-----------------RELVNQWN---APAG-----FSVNVAS------------ 496
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ L E Q+E E+ C+ L+ Q S
Sbjct: 497 --ANASQVLLATGGGHLVYLEIRDAK--LVEVKHA-QLEHEISCLDLNPIGENPQYSSLA 551
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL + ++++NL G L+ G S
Sbjct: 552 AVGMWTDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVS---------------- 595
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +++ ++G+L+D + LG++P+ L +G
Sbjct: 596 -YLLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKG 640
>gi|405970039|gb|EKC34976.1| DNA damage-binding protein 1 [Crassostrea gigas]
Length = 1160
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E+D IV+SF T VL + GE VEE SG T C+ + N ++Q+ P +R I
Sbjct: 440 EYDNMIVLSFVGQTRVLMLNGEEVEETELSGIESDQQTFLCANVVHNQLLQITPQSVRLI 499
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
D +K+++ + K S K I
Sbjct: 500 SC-------------DNQKLLK--------------------------EWKHSGGKNISL 520
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V A G L Y E+ G + + S T ME EV C+ L+ GE+ S
Sbjct: 521 ASSNTCQVV-ACVGSELYYLEL--LQGDIKQVS-TSTMEHEVACVDLTPLREGEEKSHLC 576
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++SL + L + L G + S++M G
Sbjct: 577 AIGLWTDISARVLSLPDFNSLHVEMLGG-EIIPRSILMTTFE----------------GI 619
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G+L + +G ++ R LG++P L R
Sbjct: 620 HYLLCALGDGSLFYFNFNIDTGYFTEKRKVTLGTQPTVLRTFR 662
>gi|449693281|ref|XP_004213384.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Hydra
magnipapillata]
Length = 68
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 197 DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVD 256
DCL+ ++Q LP ESL +IEMG T E G L+L +GL NG LLR V+D
Sbjct: 1 DCLEPLSMQALPAAGESLCIIEMGG---TEVGEKGTAGNAGGLFLNIGLANGVLLRTVLD 57
Query: 257 QTSGDLSDNRM 267
+GDLSD R+
Sbjct: 58 SVTGDLSDTRI 68
>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1089
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 117/285 (41%), Gaps = 62/285 (21%)
Query: 2 FDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D ++VVSF + T +L++ + +EE GF TL C + +VQV +R +
Sbjct: 413 YDTFLVVSFISETRILAMNTDDELEETEIDGFDSEAQTLFCHNAVHDQLVQVTAGSLRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
AK + K+ ++ K +N
Sbjct: 473 NAK------TRKQLTEWKAPAPMTINV--------------------------------- 493
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L + + Q+E E+ C+ ++ + S +
Sbjct: 494 ATANASQVLLATGGGNLVYIEIG--QGTLTGVAHS-QLEYEISCLDINPVGENPERSNLV 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ +L P L K + G + S++ G
Sbjct: 551 AVGMWTDISVRIFAL-PSLTLINKEMLGGEIIPRSVLFCSFD----------------GL 593
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
YL + +G L +++ ++G+LSD + LG++P+ L R +
Sbjct: 594 AYLLCAVGDGHLFNFMLNPSTGELSDRKKISLGTQPIALRTFRSK 638
>gi|149725200|ref|XP_001502072.1| PREDICTED: DNA damage-binding protein 1 [Equus caballus]
Length = 1140
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++H + L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHAQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
Length = 1171
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 122/292 (41%), Gaps = 36/292 (12%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV + +R +
Sbjct: 443 FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSNSVRLV 502
Query: 60 GAKNTTWKVSDKKESDKKKIVRCA---VNQRQIVIALQGGRLIYFEMHPVSDKKESDKKK 116
+ SD V A +Q + + L + + K+ D
Sbjct: 503 SSSTRELLNEWHAPSDYSVNVATANATQSQNHFIFQISSPSLSHGNIMICLSCKDVDNWS 562
Query: 117 I----------VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMAL 166
V + +++A GG L+Y E+ GIL E Q+E E+ C+ +
Sbjct: 563 STSSSLSLIYRVLFLLVAASVLLATGGGHLVYLEI--GDGILQEVKHA-QLEYEISCLDI 619
Query: 167 SNAPSGEQMSRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPT 225
+ S+ AVG+ D +VRL SL + + +++L G L+ G S
Sbjct: 620 NPIGENPNQSQLAAVGMWTDISVRLFSLPELNLITKEHLGGEIIPRSVLLCAFEGIS--- 676
Query: 226 SSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G+L+D + LG++P+ L
Sbjct: 677 --------------YLLCALGDGHLLNFMLNTSTGELTDRKKVSLGTQPITL 714
>gi|432851195|ref|XP_004066902.1| PREDICTED: DNA damage-binding protein 1-like [Oryzias latipes]
Length = 1140
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 111/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R
Sbjct: 420 ESDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVR-- 477
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ LQ + + VS+ KE + I
Sbjct: 478 -------------------------------LVLQDSKAL------VSEWKEPQGRNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
A N Q+V+A+ GR +Y+ + G L + S T +ME EV C+ ++ S
Sbjct: 501 AACNHTQVVLAV--GRALYY-LQILAGELKQIS-TTEMEHEVACLDITPLGESSSESPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + R++ L P K + G + S++M G+
Sbjct: 557 AVGLWTDISARMLKL-PCFTPLHKEMLGGEIIPRSILMTTFE----------------GS 599
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL +D +G LS+ + LG++P L R
Sbjct: 600 YYLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFR 642
>gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus]
Length = 1140
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K I
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNISV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+V+A+ G L Y ++HP+ L + S T +ME EV C+ ++ +S
Sbjct: 501 ASCNSSQVVVAV-GRALYYLQIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILKL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
L L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -CLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|410912407|ref|XP_003969681.1| PREDICTED: DNA damage-binding protein 1-like [Takifugu rubripes]
Length = 1140
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + N ++Q+ +R +
Sbjct: 420 ETDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHNQLIQITSGSVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+++ VS+ KE + I A N Q+V+A+ GR +Y+
Sbjct: 480 -LQDSKALVSEWKEPQGRNISVAACNHTQVVLAV--GRALYY------------------ 518
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
QI+ G L + S T +ME EV C+ ++ S
Sbjct: 519 -----LQIL----------------AGELKQIS-TTEMEHEVACLDITPLGEAGAESPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + R++ L P K + G + S++M G+
Sbjct: 557 AVGLWTDISARVLKL-PCFTPLHKEMLGGEIIPRSILMTTFE----------------GS 599
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL +D +G LS+ + LG++P L R
Sbjct: 600 YYLLCALGDGALFYFGLDLQTGALSECKKVTLGTQPTVLRTFR 642
>gi|395544366|ref|XP_003774082.1| PREDICTED: DNA damage-binding protein 1 [Sarcophilus harrisii]
Length = 1239
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 103/263 (39%), Gaps = 61/263 (23%)
Query: 20 GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKI 79
GE VEE +GF T C + ++Q+ +R + ++ VS+ KE K I
Sbjct: 539 GEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLV-SQEPKALVSEWKEPQGKNI 597
Query: 80 VRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYF 139
+ N Q+V+A+ GR +Y Y
Sbjct: 598 SVASCNSSQVVVAV--GRALY-------------------------------------YL 618
Query: 140 EMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL-ADNTVRLISLAPQDC 198
++HP+ L + S T +ME EV C+ ++ MS A+GL D + R++ L P
Sbjct: 619 QIHPQE--LRQISHT-EMEHEVACLDITPLGDSNGMSPLCAIGLWTDISARILKL-PSFE 674
Query: 199 LKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQT 258
L K + G + S++M +S YL L +GAL +
Sbjct: 675 LLHKEMLGGEIIPRSILMTTFESSH----------------YLLCALGDGALFYFGLSIE 718
Query: 259 SGDLSDNRMRYLGSRPVKLFKIR 281
+G LSD + LG++P L R
Sbjct: 719 TGLLSDRKKVTLGTQPTVLRTFR 741
>gi|427780151|gb|JAA55527.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1181
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 64/283 (22%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF + T C + + ++QV +R +
Sbjct: 459 ERDNTLVLSFVRQTRVLMLSGEEVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLV 518
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
++ T +++ K + I NQ Q+V
Sbjct: 519 DSQ-TKQLLNEWKPPGARNISVVTCNQSQVV----------------------------- 548
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
CAV R+ V L+ G G+L++ S ++E+EV C+ ++ + +
Sbjct: 549 CAV--RKEVFCLEIG----------DGVLNQISNA-ELENEVACLDITPLSEKAEKATLC 595
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D ++R++SL L+++N+ G ++ ++I T+ + G
Sbjct: 596 AVGLWTDISIRILSLPSLQQLQKENIGG--EIIPRSILI-------TTFE--------GI 638
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRP--VKLFK 279
YL L +G+L +++ T+G L+D + LG++P +K FK
Sbjct: 639 HYLLCALGDGSLFYFLLEATTGALTDRKKVTLGTQPTVLKTFK 681
>gi|427788481|gb|JAA59692.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
Length = 1156
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 64/283 (22%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE +GF + T C + + ++QV +R +
Sbjct: 434 ERDNTLVLSFVRQTRVLMLSGEEVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLV 493
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
++ T +++ K + I NQ Q+V
Sbjct: 494 DSQ-TKQLLNEWKPPGARNISVVTCNQSQVV----------------------------- 523
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
CAV R+ V L+ G G+L++ S ++E+EV C+ ++ + +
Sbjct: 524 CAV--RKEVFCLEIG----------DGVLNQISNA-ELENEVACLDITPLSEKAEKATLC 570
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D ++R++SL L+++N+ G ++ ++I T+ + G
Sbjct: 571 AVGLWTDISIRILSLPSLQQLQKENIGG--EIIPRSILI-------TTFE--------GI 613
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRP--VKLFK 279
YL L +G+L +++ T+G L+D + LG++P +K FK
Sbjct: 614 HYLLCALGDGSLFYFLLEATTGALTDRKKVTLGTQPTVLKTFK 656
>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine
max]
Length = 1089
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV +R +
Sbjct: 413 FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT ++ ++ + V A
Sbjct: 473 SS--TTRELRNEWHAPSGYSVNVA------------------------------------ 494
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ GIL E Q+E E+ C+ ++ S
Sbjct: 495 -TANATQVLLATGGGHLVYLEI--GDGILQEVKHA-QLEYEISCLDINPIGENPNHSHLA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL + ++ L G L+ G S
Sbjct: 551 AVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGIS---------------- 594
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G+L+D + LG++P+ L
Sbjct: 595 -YLLCALGDGHLLNFMLNTSTGELADRKKVSLGTQPITL 632
>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine
max]
Length = 1068
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV +R +
Sbjct: 392 FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLV 451
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT ++ ++ + V A
Sbjct: 452 SS--TTRELRNEWHAPSGYSVNVA------------------------------------ 473
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ GIL E Q+E E+ C+ ++ S
Sbjct: 474 -TANATQVLLATGGGHLVYLEI--GDGILQEVKHA-QLEYEISCLDINPIGENPNHSHLA 529
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL + ++ L G L+ G S
Sbjct: 530 AVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGIS---------------- 573
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G+L+D + LG++P+ L
Sbjct: 574 -YLLCALGDGHLLNFMLNTSTGELADRKKVSLGTQPITL 611
>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1067
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV + +R +
Sbjct: 392 FDTFLVVSFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLV 451
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT ++ D+ + V A
Sbjct: 452 SS--TTRELRDEWHAPAGFTVNVA------------------------------------ 473
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L E + +E EV C+ ++ S+
Sbjct: 474 -TANASQVLLATGGGHLVYLEIG--DGKLTEVQHAL-LEYEVSCLDINPIGDNPNYSQLA 529
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL P+ L K G + S+++ G
Sbjct: 530 AVGMWTDISVRIFSL-PELTLITKEQLGGEIIPRSVLLCAFE----------------GI 572
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D T+G L D + LG++P+ L
Sbjct: 573 SYLLCALGDGHLLNFQMDTTTGQLKDRKKVSLGTQPITL 611
>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName:
Full=UV-damaged DNA-binding protein 1a; Short=DDB1a
gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
Length = 1088
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV + +R +
Sbjct: 413 FDTFLVVSFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT ++ D+ + V A
Sbjct: 473 SS--TTRELRDEWHAPAGFTVNVA------------------------------------ 494
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L E + +E EV C+ ++ S+
Sbjct: 495 -TANASQVLLATGGGHLVYLEIG--DGKLTEVQHAL-LEYEVSCLDINPIGDNPNYSQLA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL P+ L K G + S+++ G
Sbjct: 551 AVGMWTDISVRIFSL-PELTLITKEQLGGEIIPRSVLLCAFE----------------GI 593
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D T+G L D + LG++P+ L
Sbjct: 594 SYLLCALGDGHLLNFQMDTTTGQLKDRKKVSLGTQPITL 632
>gi|259148530|emb|CAY81775.1| Rse1p [Saccharomyces cerevisiae EC1118]
Length = 1361
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 68/291 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSG-----SGF-YGTTPTLCCSAMGDNSIVQVYPDG 55
+ + ++F T++L I E++EE++ S F T+ MG +SI+QV
Sbjct: 547 NTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSIIQVCTAE 606
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVR--CAVNQR-QIVIALQGGRLIYFEMHPVSDKKES 112
+RHI + + S+K +R CA + + Q++I+L L+YF++ SD
Sbjct: 607 LRHIVPTGKS-RYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFKIDVSSDS--- 662
Query: 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG 172
LI HPE LD M S+V +
Sbjct: 663 -----------------------LIELTTHPE---LD------TMPSKVAIV------QD 684
Query: 173 EQMSRFLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
Q + LA+ + ++++SL Q D L +LQ + + ++M+ +
Sbjct: 685 TQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVRDSS--------- 735
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+G L L+VGL+NG ++ + G +D + R+LG +PV L +R
Sbjct: 736 -----IGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLR 781
>gi|365763701|gb|EHN05227.1| Rse1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1361
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 68/291 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSG-----SGF-YGTTPTLCCSAMGDNSIVQVYPDG 55
+ + ++F T++L I E++EE++ S F T+ MG +SI+QV
Sbjct: 547 NTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSIIQVCTAE 606
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVR--CAVNQR-QIVIALQGGRLIYFEMHPVSDKKES 112
+RHI + + S+K +R CA + + Q++I+L L+YF++ SD
Sbjct: 607 LRHIVPTGKS-RYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFKIDVSSDS--- 662
Query: 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG 172
LI HPE LD M S+V +
Sbjct: 663 -----------------------LIELTTHPE---LD------TMPSKVAIV------QD 684
Query: 173 EQMSRFLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
Q + LA+ + ++++SL Q D L +LQ + + ++M+ +
Sbjct: 685 TQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVRDSS--------- 735
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+G L L+VGL+NG ++ + G +D + R+LG +PV L +R
Sbjct: 736 -----IGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLR 781
>gi|6323592|ref|NP_013663.1| Rse1p [Saccharomyces cerevisiae S288c]
gi|2497090|sp|Q04693.1|RSE1_YEAST RecName: Full=Pre-mRNA-splicing factor RSE1; AltName: Full=RNA
splicing and ER to Golgi transport factor 1; AltName:
Full=Spliceosome-associated protein 130
gi|642306|emb|CAA87825.1| unknown [Saccharomyces cerevisiae]
gi|190408196|gb|EDV11461.1| pre-mRNA splicing factor RSE1 [Saccharomyces cerevisiae RM11-1a]
gi|256271284|gb|EEU06357.1| Rse1p [Saccharomyces cerevisiae JAY291]
gi|285813955|tpg|DAA09850.1| TPA: Rse1p [Saccharomyces cerevisiae S288c]
Length = 1361
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 68/291 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSG-----SGF-YGTTPTLCCSAMGDNSIVQVYPDG 55
+ + ++F T++L I E++EE++ S F T+ MG +SI+QV
Sbjct: 547 NTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSIIQVCTAE 606
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVR--CAVNQR-QIVIALQGGRLIYFEMHPVSDKKES 112
+RHI + + S+K +R CA + + Q++I+L L+YF++ SD
Sbjct: 607 LRHIVPTGKS-RYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFKIDVSSDS--- 662
Query: 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG 172
LI HPE LD M S+V +
Sbjct: 663 -----------------------LIELTTHPE---LD------TMPSKVAIV------QD 684
Query: 173 EQMSRFLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
Q + LA+ + ++++SL Q D L +LQ + + ++M+ +
Sbjct: 685 TQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVRDSS--------- 735
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+G L L+VGL+NG ++ + G +D + R+LG +PV L +R
Sbjct: 736 -----IGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLR 781
>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
Length = 727
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV + +R +
Sbjct: 52 FDTFLVVSFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLV 111
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT ++ D+ + V A
Sbjct: 112 SS--TTRELRDEWHAPAGFTVNVA------------------------------------ 133
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L E + +E EV C+ ++ S+
Sbjct: 134 -TANASQVLLATGGGHLVYLEIGD--GKLTEVQHAL-LEYEVSCLDINPIGDNPNYSQLA 189
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL P+ L K G + S+++ G
Sbjct: 190 AVGMWTDISVRIFSL-PELTLITKEQLGGEIIPRSVLLCAFE----------------GI 232
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D T+G L D + LG++P+ L
Sbjct: 233 SYLLCALGDGHLLNFQMDTTTGQLKDRKKVSLGTQPITL 271
>gi|194741158|ref|XP_001953056.1| GF17579 [Drosophila ananassae]
gi|190626115|gb|EDV41639.1| GF17579 [Drosophila ananassae]
Length = 1140
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T C+ + + I+QV D +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQIIQVTSDSVRLVK 479
Query: 61 AKNTTWKVSDKKESDKK-KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ + E D+ +V C N QIV+A R I++
Sbjct: 480 SATKDLVAEWRPEGDRSIGVVSC--NSTQIVVA--SARDIFY------------------ 517
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
I ++ G+L+ ++ +T+ E V C+ ++ + S +
Sbjct: 518 ---------IVIEDGKLV-----------EKSRKTLAYE--VACLDITPLDESQNKSDLV 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + ++SL + + + L G + S++M G
Sbjct: 556 AVGLWTDISAVILSLPELETIYTEKLSG-EIIPRSILMTTFE----------------GI 598
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++DQT+G L+D + LG++P L R
Sbjct: 599 HYLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
Length = 1088
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T VL++ + +EE GF TL C N +VQV + +R +
Sbjct: 413 FDTFLVVSFISETRVLAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT ++ D+ + V A
Sbjct: 473 SS--TTRELRDEWHAPAGFTVNVA------------------------------------ 494
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L E + +E EV C+ ++ S+
Sbjct: 495 -TANASQVLLATGGGHLVYLEI--GDGKLTEVQHAV-LEYEVSCLDINPIGDNPNYSQLA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
+VG+ D +VR+ SL P+ L K G + S+++ G
Sbjct: 551 SVGMWTDISVRIFSL-PELTLITKEQLGGEIIPRSVLLCAFE----------------GI 593
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D T+G L D + LG++P+ L
Sbjct: 594 SYLLCALGDGHLLNFQLDTTTGQLKDRKKVSLGTQPITL 632
>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine
max]
Length = 1068
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV +R +
Sbjct: 392 FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLV 451
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT + ++ + V A
Sbjct: 452 SS--TTRDLRNEWHAPSGYSVNVA------------------------------------ 473
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ GIL E Q+E E+ C+ ++ S
Sbjct: 474 -TANATQVLLATGGGHLVYLEI--GDGILQEVKHA-QLEYEISCLDINPIGENPNHSNLA 529
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL + ++ L G L+ G S
Sbjct: 530 AVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGIS---------------- 573
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G+L+D + LG++P+ L
Sbjct: 574 -YLLCALGDGHLLNFMLNTSTGELTDRKKVSLGTQPITL 611
>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine
max]
Length = 1089
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV +R +
Sbjct: 413 FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSSSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT + ++ + V A
Sbjct: 473 SS--TTRDLRNEWHAPSGYSVNVA------------------------------------ 494
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ GIL E Q+E E+ C+ ++ S
Sbjct: 495 -TANATQVLLATGGGHLVYLEI--GDGILQEVKHA-QLEYEISCLDINPIGENPNHSNLA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL + ++ L G L+ G S
Sbjct: 551 AVGMWTDISVRIFSLPDLSLITKEQLGGEIIPRSVLLCAFEGIS---------------- 594
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G+L+D + LG++P+ L
Sbjct: 595 -YLLCALGDGHLLNFMLNTSTGELTDRKKVSLGTQPITL 632
>gi|363750540|ref|XP_003645487.1| hypothetical protein Ecym_3168 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889121|gb|AET38670.1| Hypothetical protein Ecym_3168 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1295
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQM 175
+I+ + Q+V+AL ++YFE+ L+E + I++E + ++++N
Sbjct: 569 RILDATCSNTQLVLALSNNEIVYFEIGTNDS-LNELQDRIELEDTINGLSVANG----MR 623
Query: 176 SRFLAVGLADNTVRLISLAPQD---CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAG 232
S +L V D +V++ SL D + ++Q L A S+ ++ +S+D
Sbjct: 624 SNYLVVVCGDTSVKVYSLKMDDQNNFFEVVSMQALTSSANSIKLV-------SSND---- 672
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
+L L++GL +G +R +D+ G L D R +YLGS+PV +
Sbjct: 673 -----SLCLHIGLASGVYVRSRLDKHDGQLFDVRTKYLGSKPVDI 712
>gi|207342522|gb|EDZ70265.1| YML049Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1267
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 68/291 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSG-----SGF-YGTTPTLCCSAMGDNSIVQVYPDG 55
+ + ++F T++L I E++EE++ S F T+ MG +SI+QV
Sbjct: 453 NTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSIIQVCTAE 512
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVR--CAVNQR-QIVIALQGGRLIYFEMHPVSDKKES 112
+RHI + + S+K +R CA + + Q++I+L L+YF+
Sbjct: 513 LRHIVPTGKS-RYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFK---------- 561
Query: 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG 172
I + LI HPE LD M S+V +
Sbjct: 562 ----------------IDVSSDSLIELTTHPE---LD------TMPSKVAIV------QD 590
Query: 173 EQMSRFLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
Q + LA+ + ++++SL Q D L +LQ + + ++M+ +
Sbjct: 591 TQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVRDSS--------- 641
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+G L L+VGL+NG ++ + G +D + R+LG +PV L +R
Sbjct: 642 -----IGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLR 687
>gi|195145844|ref|XP_002013900.1| GL24391 [Drosophila persimilis]
gi|194102843|gb|EDW24886.1| GL24391 [Drosophila persimilis]
Length = 1140
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T C+ + + ++QV D +R +
Sbjct: 420 YENTLVLAFVGLTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVK 479
Query: 61 AKNTTWKVSDKKESDKK-KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ + E D+ +V C N QIV+A R I++
Sbjct: 480 SATKALICEWRPEGDRSIGVVSC--NSTQIVLA--SARDIFY------------------ 517
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
I ++ GRL+ ++ +T+ E V C+ ++ + S +
Sbjct: 518 ---------IVIEDGRLV-----------EKSRKTLAYE--VACLDITPLDETQNKSDLI 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + ++SL + + + L G + S++M G
Sbjct: 556 AVGLWTDISAVILSLPDLETIYTEKLSG-EIIPRSILMTTFE----------------GI 598
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++DQT+G L+D + LG++P L R
Sbjct: 599 HYLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|125774475|ref|XP_001358496.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
gi|54638233|gb|EAL27635.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
Length = 1140
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T C+ + + ++QV D +R +
Sbjct: 420 YENTLVLAFVGLTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVK 479
Query: 61 AKNTTWKVSDKKESDKK-KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ + E D+ +V C N QIV+A R I++
Sbjct: 480 SATKALICEWRPEGDRSIGVVSC--NSTQIVLA--SARDIFY------------------ 517
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
I ++ GRL+ ++ +T+ E V C+ ++ + S +
Sbjct: 518 ---------IVIEDGRLV-----------EKSRKTLAYE--VACLDITPLDETQNKSDLI 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + ++SL + + + L G + S++M G
Sbjct: 556 AVGLWTDISAVILSLPDLETIYTEKLSG-EIIPRSILMTTFE----------------GI 598
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++DQT+G L+D + LG++P L R
Sbjct: 599 HYLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|392297537|gb|EIW08637.1| Rse1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1332
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 68/291 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSG-----SGF-YGTTPTLCCSAMGDNSIVQVYPDG 55
+ + ++F T++L I E++EE++ S F T+ MG +SI+QV
Sbjct: 518 NTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSIIQVCTAE 577
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVR--CAVNQR-QIVIALQGGRLIYFEMHPVSDKKES 112
+RHI + + S+K +R CA + + Q++I+L L+YF+
Sbjct: 578 LRHIVPTGKS-RYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFK---------- 626
Query: 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG 172
I + LI HPE LD M S+V +
Sbjct: 627 ----------------IDVSSDSLIELTTHPE---LD------TMPSKVAIV------QD 655
Query: 173 EQMSRFLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
Q + LA+ + ++++SL Q D L +LQ + + ++M+ +
Sbjct: 656 TQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVRDSS--------- 706
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+G L L+VGL+NG ++ + G +D + R+LG +PV L +R
Sbjct: 707 -----IGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLR 752
>gi|323336187|gb|EGA77458.1| Rse1p [Saccharomyces cerevisiae Vin13]
Length = 1332
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 68/291 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSG-----SGF-YGTTPTLCCSAMGDNSIVQVYPDG 55
+ + ++F T++L I E++EE++ S F T+ MG +SI+QV
Sbjct: 518 NTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSIIQVCTAE 577
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVR--CAVNQR-QIVIALQGGRLIYFEMHPVSDKKES 112
+RHI + + S+K +R CA + + Q++I+L L+YF+
Sbjct: 578 LRHIVPTGKS-RYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFK---------- 626
Query: 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG 172
I + LI HPE LD M S+V +
Sbjct: 627 ----------------IDVSSDSLIELTTHPE---LD------TMPSKVAIV------QD 655
Query: 173 EQMSRFLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
Q + LA+ + ++++SL Q D L +LQ + + ++M+ +
Sbjct: 656 TQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVRDSS--------- 706
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+G L L+VGL+NG ++ + G +D + R+LG +PV L +R
Sbjct: 707 -----IGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLR 752
>gi|151946117|gb|EDN64348.1| pre-spliceosome component [Saccharomyces cerevisiae YJM789]
Length = 1361
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 68/291 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSG-----SGF-YGTTPTLCCSAMGDNSIVQVYPDG 55
+ + ++F T++L I E++EE++ S F T+ MG +SI+QV
Sbjct: 547 NTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSIIQVCTAE 606
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVR--CAVNQR-QIVIALQGGRLIYFEMHPVSDKKES 112
+RHI + + S+K +R CA + + Q++I+L L+YF+
Sbjct: 607 LRHIVPTGKS-RYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFK---------- 655
Query: 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG 172
I + LI HPE LD M S+V +
Sbjct: 656 ----------------IDVSSDSLIELTTHPE---LD------TMPSKVAIV------QD 684
Query: 173 EQMSRFLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
Q + LA+ + ++++SL Q D L +LQ + + ++M+ +
Sbjct: 685 TQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVRDSS--------- 735
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+G L L+VGL+NG ++ + G +D + R+LG +PV L +R
Sbjct: 736 -----IGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLR 781
>gi|349580241|dbj|GAA25401.1| K7_Rse1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1361
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 68/291 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSG-----SGF-YGTTPTLCCSAMGDNSIVQVYPDG 55
+ + ++F T++L I E++EE++ S F T+ MG +SI+QV
Sbjct: 547 NTLLFITFPKKTMILQIDNESMEELTPDEATRSAFKLSQDTTIHTCLMGSHSIIQVCTAE 606
Query: 56 IRHIGAKNTTWKVSDKKESDKKKIVR--CAVNQR-QIVIALQGGRLIYFEMHPVSDKKES 112
+RHI + + S+K +R CA + + Q++I+L L+YF+
Sbjct: 607 LRHIVPTGKS-RYSNKLTWVPPAGIRIVCATSSKTQLIISLSNYELVYFK---------- 655
Query: 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG 172
I + LI HPE LD M S+V +
Sbjct: 656 ----------------IDVSSDSLIELTTHPE---LD------TMPSKVAIV------QD 684
Query: 173 EQMSRFLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
Q + LA+ + ++++SL Q D L +LQ + + ++M+ +
Sbjct: 685 TQHADLLAIADNEGMIKIMSLKDQKEDFLTVISLQLVSEKISDMIMVRDSS--------- 735
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+G L L+VGL+NG ++ + G +D + R+LG +PV L +R
Sbjct: 736 -----IGQLNLHVGLENGVYMKFHIGDVDGSFTDIKRRFLGLKPVSLSYLR 781
>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
lyrata]
gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV + +R +
Sbjct: 413 FDTFLVVSFISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT ++ D+ + V A
Sbjct: 473 SS--TTRELRDEWHAPAGFTVNVA------------------------------------ 494
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L E + +E EV C+ ++ S+
Sbjct: 495 -TANASQVLLATGGGHLVYLEI--GDGKLTEVQHAL-LEYEVSCLDINPIGDNPNYSQLA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
+VG+ D +VR+ SL P+ L K G + S+++ G
Sbjct: 551 SVGMWTDISVRIFSL-PELTLITKEQLGGEIIPRSVLLCAFE----------------GI 593
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D T+G L D + LG++P+ L
Sbjct: 594 SYLLCALGDGHLLNFQLDTTTGQLKDRKKVSLGTQPITL 632
>gi|384250802|gb|EIE24281.1| hypothetical protein COCSUDRAFT_28729 [Coccomyxa subellipsoidea
C-169]
Length = 1101
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 109/285 (38%), Gaps = 61/285 (21%)
Query: 2 FDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++V+SF T +L+I + ++E GF TLCC + +VQV +R +
Sbjct: 422 FDTFLVISFVGETRILAINADDELDEAELPGFSADAQTLCCGNTVSDHLVQVAGADVRLV 481
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
A R + + P + I
Sbjct: 482 DAST---------------------------------RQLTHQWRPPA------GLNINV 502
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+V+ Q + G L+Y E+ E+GI E +++++EV C+ +S + + L
Sbjct: 503 ASVSPTQASPSTAHGNLVYLELG-ESGI--EQKGHVKLDAEVACVDISPLSEDGEAASLL 559
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
AVG D V + SL L + L G ++ V+ P
Sbjct: 560 AVGTWDMRVHIFSLPAMAPLVSEPLGG--EIIPRSVLFAAFEGVP--------------- 602
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL + +G L VD+ +G L+D + LG++P+ L R G
Sbjct: 603 YLLCAMGDGQLYNFHVDEATGALADRKKICLGTKPIMLRSFRSNG 647
>gi|194901554|ref|XP_001980317.1| GG19434 [Drosophila erecta]
gi|190652020|gb|EDV49275.1| GG19434 [Drosophila erecta]
Length = 1140
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 62/282 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T CS + + ++QV D +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVS 479
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T V++ + + + I + N QIV+A
Sbjct: 480 SA-TKALVAEWRPTGDRSIGVVSCNTTQIVVA---------------------------S 511
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A + IVI E G L E S +E EV C+ ++ ++ S +A
Sbjct: 512 ACDLFYIVI--------------EDGTLREQSRR-TLEYEVACLDITPLDETQKKSDMVA 556
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D + ++SL + + + L G + S++M G
Sbjct: 557 VGLWTDISAVIMSLPDLETIYTEKLSG-EIIPRSILMTTFE----------------GIH 599
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++DQT+G L+D + LG++P L R
Sbjct: 600 YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|351699158|gb|EHB02077.1| DNA damage-binding protein 1 [Heterocephalus glaber]
Length = 1144
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 62/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 420 ETDDTLVLSFVGQTRVLMLNGEEVEETELVGFVDDQQTFFCGNVAHQQLIQITSASVRLV 479
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K + VS+ KE K
Sbjct: 480 --------------SQEPKAL-------------------------VSEWKEPQGKNNSV 500
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ + Q+V+A+ G L Y ++HP L + S+T +ME EV C+ ++ +S
Sbjct: 501 ASGSSSQVVVAV-GRALYYLQIHPRE--LRQISQT-EMEHEVACLDITPLGDSSGLSPLC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+GL D + R++ L P L K + G + S++M +S
Sbjct: 557 AIGLWTDISARILQL-PSFELLHKEMLGGEIIPRSILMTTFESSH--------------- 600
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL ++ +G LSD + LG++P L R
Sbjct: 601 -YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFR 642
>gi|410079495|ref|XP_003957328.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
gi|372463914|emb|CCF58193.1| hypothetical protein KAFR_0E00390 [Kazachstania africana CBS 2517]
Length = 1267
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 27/166 (16%)
Query: 117 IVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMS 176
I+ + +Q+V+AL ++IYFEM E L E ++ +Q+ + VL ++L + S
Sbjct: 559 IIAASSTHKQLVVALSNNQVIYFEMPGEDSTLVESTKKLQLSTRVLTLSL--RLDVNKFS 616
Query: 177 RFLAVGLADNTVRLISL----APQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAG 232
+ L V D + ++SL + + L+ + Q L S+ IE
Sbjct: 617 KNLIVATDDALIHIVSLDHEKSEDEFLEITSFQKLLGNVSSITYIEDT------------ 664
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDL-SDNRMRYLGSRPVKL 277
+++GL NG +R + DL SD R +YLG++PV L
Sbjct: 665 --------IHLGLDNGVYIRSKFFGGNNDLISDVRTKYLGNKPVNL 702
>gi|41055225|ref|NP_956920.1| DNA damage-binding protein 1 [Danio rerio]
gi|34784892|gb|AAH56837.1| Zgc:63840 [Danio rerio]
Length = 897
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 66/283 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 422 DDMLVLSFVGQTRVLMLSGEEVEETELQGFVDNQQTFFCGNVAHQQLIQITSVSVRLV-- 479
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
D K +V S+ KE + I +
Sbjct: 480 -----------TQDSKALV--------------------------SEWKEPQGRNISVAS 502
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQM--SRFL 179
N Q+V+A+ GR++Y+ + +G L + S T +ME EV C+ ++ P GE+ S
Sbjct: 503 CNNTQVVLAV--GRVLYY-LQILSGELKQISST-EMEHEVACLDIT--PLGERTADSCIC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + RL+ L P K + G + S++M G+
Sbjct: 557 AVGLWTDISARLLKL-PCFTPLHKEMLGGEIIPRSILMTTFE----------------GS 599
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL +D +G LS+ + LG++P L R
Sbjct: 600 HYLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTFR 642
>gi|385865228|gb|AFI92852.1| DNA damage-binding protein 1 [Danio rerio]
Length = 1140
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 66/283 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D +V+SF T VL + GE VEE GF T C + ++Q+ +R +
Sbjct: 422 DDMLVLSFVGQTRVLMLSGEEVEETELQGFVDNQQTFFCGNVAHQQLIQITSVSVRLV-- 479
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
D K +V S+ KE + I +
Sbjct: 480 -----------TQDSKALV--------------------------SEWKEPQGRNISVAS 502
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQM--SRFL 179
N Q+V+A+ GR++Y+ + +G L + S T +ME EV C+ ++ P GE+ S
Sbjct: 503 CNNTQVVLAV--GRVLYY-LQILSGELKQISST-EMEHEVACLDIT--PLGERTADSCIC 556
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + RL+ L P K + G + S++M G+
Sbjct: 557 AVGLWTDISARLLKL-PCFTPLHKEMLGGEIIPRSILMTTFE----------------GS 599
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +GAL +D +G LS+ + LG++P L R
Sbjct: 600 HYLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTFR 642
>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
lyrata]
Length = 1088
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 64/280 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L ++I + +EE GF TL C N +VQV + +R +
Sbjct: 413 FDTFLVVSFISETRILAMNIEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAV-NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ TT ++ +K ++ V A N Q+++A GG L+Y E + D ++ K ++
Sbjct: 473 SS--TTRELRNKWDAPAGFAVNVATANASQVLLATGGGHLVYLE---IGDGTLTEVKHVL 527
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+E EV C+ ++ S+
Sbjct: 528 --------------------------------------LEYEVSCLDINPIGDNPNYSQL 549
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVGL D +VR+ L P L K G + S+++ G
Sbjct: 550 AAVGLWTDISVRIFVL-PDLTLITKEQLGGEIIPRSVLLCAFE----------------G 592
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D +SG L D + LG++P+ L
Sbjct: 593 ISYLLCALGDGHLLNFQLDTSSGKLRDRKKVSLGTQPITL 632
>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
distachyon]
Length = 1090
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 62/286 (21%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D ++VVSF + T L +++ + +EE GF TL C + ++QV + +R
Sbjct: 414 YDTFLVVSFISETRFLAMNMEDELEETEIEGFDAQIQTLFCQNAISDLLIQVTANSVR-- 471
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+V CA R++V D +
Sbjct: 472 -------------------LVSCA--SRELV----------------DHWNAPDGFSVNV 494
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
+ N Q+++A GG L+Y E+ L E Q+E E+ C+ L+ Q S
Sbjct: 495 ASANASQVLLATGGGHLVYLEIRDAK--LVEVKHA-QLEHEISCVDLNPIGENPQYSSLA 551
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
A+G+ D +V L+SL + ++++NL G L+ G S
Sbjct: 552 AIGMWTDISVSLLSLPDLELIRKENLGGEIVPRSVLLCTLEGVS---------------- 595
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +++ ++G+L+D + LG++P+ L +G
Sbjct: 596 -YLLCALGDGHLFSFLLNVSTGELTDKKKVSLGTQPISLRTFSSKG 640
>gi|159489018|ref|XP_001702494.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
reinhardtii]
gi|158280516|gb|EDP06273.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
reinhardtii]
Length = 1147
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 120/291 (41%), Gaps = 67/291 (23%)
Query: 1 EFDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
E DAY+V++F T +L++ E ++E GF TL C + ++QV +R
Sbjct: 457 EHDAYLVLTFVGETRLLALNAEEELDEAEIPGFDAAAQTLWCGNTACDHLLQVTSSSVRL 516
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ + + +AL VS+ + I
Sbjct: 517 VDSSS---------------------------LAL------------VSEWRPPAGFSIN 537
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETG--ILDECSETIQMESEVLC-----MALSNAPS 171
A + Q+V+A GG L+Y E+ + G + E + + ++SEV C + L+ P
Sbjct: 538 VAAGSPTQVVVATGGGHLVYLEVQAQAGGAAVVEVAN-VTLDSEVACVDVSPLLLTAGPG 596
Query: 172 GE-QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230
G + S +AVG D T++L+++ L L G + S++ + +
Sbjct: 597 GSAERSGLVAVGRWDQTLQLLAVPGLTPLSVTPLGG-EVIPRSVLCVGLE---------- 645
Query: 231 AGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
G Y VGL +GAL ++ +G L+D + LG++P+ L R
Sbjct: 646 ------GVPYCMVGLGDGALHTWRLEPATGALTDRKRVVLGTKPITLRTFR 690
>gi|449684814|ref|XP_004210722.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
magnipapillata]
Length = 725
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 74 SDKKKIVRCA-VNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQ 132
S K+ CA VN Q++ + +F S+ D K I N QIV++L
Sbjct: 146 SSDKQTTYCANVNFNQLI-----QKHFFF-----SNWLPPDNKHISVAVSNSFQIVVSL- 194
Query: 133 GGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL-ADNTVRLI 191
G LIY E+ E + + S T+ +E EV C+ LS S E S L VGL D +VR++
Sbjct: 195 GKELIYLEV--EDSNIKQISHTV-LEYEVACLDLSPKGSNETTSDRLCVGLWTDISVRIL 251
Query: 192 SLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALL 251
+L + L + L G + S++MI T D+ YL L +G+L
Sbjct: 252 ALPNLEELYVEKLSG-EMIPRSILMI-------TFEDKE---------YLLCALGDGSLF 294
Query: 252 RMVVDQTSGDLSDNRMRYLGSRP 274
++++ +G LSD + LG++P
Sbjct: 295 YFLLNRLTGVLSDQKKVSLGTKP 317
>gi|290998415|ref|XP_002681776.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
gi|284095401|gb|EFC49032.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
Length = 1103
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 65/278 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGF-YGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+ Y+V+SF+ TL+ S+ E + E GF +T LC + +G+N +
Sbjct: 418 EKYLVMSFTGQTLISSVDNEEIGEAKIPGFDVDSTTVLCDTVIGNNYL------------ 465
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+V+DK RL+ + D+ + I
Sbjct: 466 ------QVTDKT-----------------------ARLVSSHTLELIDEWKPSSGTISLA 496
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A N Q+V++L G+L+Y E+ ++ L + +T +++ EV C+ +S G+ S A
Sbjct: 497 ASNPTQLVVSLGEGKLVYIEISAQS--LKQIQQT-KLDYEVSCIDIS-PEEGKISSTVCA 552
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VG+ + +VR+++L D L + L G L S++M P G
Sbjct: 553 VGMWTEISVRVLTLPSFDILTVQELGG-EILPRSILM----------------PTFEGIN 595
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL GL +G L +D+ G L+D + GS+P+ L
Sbjct: 596 YLMCGLGDGHLFTFKMDRGMGILTDKKRIVAGSKPIML 633
>gi|195449948|ref|XP_002072297.1| GK22405 [Drosophila willistoni]
gi|194168382|gb|EDW83283.1| GK22405 [Drosophila willistoni]
Length = 1140
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T C+ + + ++QV D +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVEHDQLIQVTSDSVRLVK 479
Query: 61 AKNTTWKVSDKKESDKK-KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ + + + E D+ +V C N QIV+A R I++
Sbjct: 480 SSSKSLVAEWRPEGDRSIGVVSC--NGTQIVVA--SARDIFY------------------ 517
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
I ++ G L ++C +T+ E V C+ ++ + S +
Sbjct: 518 ---------IVIEDGNL-----------QEKCRKTLAYE--VACLDITPLDEKQNKSELV 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + ++SL D + + L G + S++M G
Sbjct: 556 AVGLWTDISAVMLSLPSLDTIYTEKLSG-EIIPRSILMTTFE----------------GI 598
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++D +G L+D + LG++P L R
Sbjct: 599 HYLLCALGDGSMYYFIMDPITGQLTDKKKVTLGTQPTTLRTFR 641
>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
Length = 1088
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 64/280 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L ++I + +EE GF TL C N +VQV + +R +
Sbjct: 413 FDTFLVVSFISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAV-NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ TT ++ +K ++ V A N Q+++A GG L+Y E + D ++ K ++
Sbjct: 473 SS--TTRELRNKWDAPAGFSVNVATANASQVLLATGGGHLVYLE---IGDGTLTEVKHVL 527
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+E EV C+ ++ S+
Sbjct: 528 --------------------------------------LEYEVSCLDINPIGDNPNYSQL 549
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR+ L + ++ L G L+ G S
Sbjct: 550 AAVGMWTDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGIS--------------- 594
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D + G L D + LG+RP+ L
Sbjct: 595 --YLLCALGDGHLLNFQLDTSCGKLRDRKKVSLGTRPITL 632
>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName:
Full=UV-damaged DNA-binding protein 1b; Short=DDB1b
gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
Length = 1088
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 64/280 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L ++I + +EE GF TL C N +VQV + +R +
Sbjct: 413 FDTFLVVSFISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAV-NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ TT ++ +K ++ V A N Q+++A GG L+Y E + D ++ K ++
Sbjct: 473 SS--TTRELRNKWDAPAGFSVNVATANASQVLLATGGGHLVYLE---IGDGTLTEVKHVL 527
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+E EV C+ ++ S+
Sbjct: 528 --------------------------------------LEYEVSCLDINPIGDNPNYSQL 549
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR+ L + ++ L G L+ G S
Sbjct: 550 AAVGMWTDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGIS--------------- 594
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D + G L D + LG+RP+ L
Sbjct: 595 --YLLCALGDGHLLNFQLDTSCGKLRDRKKVSLGTRPITL 632
>gi|340381612|ref|XP_003389315.1| PREDICTED: DNA damage-binding protein 1-like [Amphimedon
queenslandica]
Length = 1142
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D +V++F T+ L + GE VEE T CS + N+I+Q+ +R +
Sbjct: 421 ELDDTVVLTFVGQTMALRLAGEEVEETELPALVTDQQTFYCSNVTGNAIIQITTKSVRLM 480
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
K M + D D + I
Sbjct: 481 DDK---------------------------------------AMELICDWSPPDGRGIST 501
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPET-GILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
A N Q+++A+ G L Y E+ P + G L S T M EV C+ + N S S
Sbjct: 502 AACNSSQVMVAV-GCDLYYLEVKPGSPGELLLISHT-TMSHEVACLDI-NPLSEAGTSSL 558
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVGL D +V+++++ + L + L G + S++M+E+G G
Sbjct: 559 CAVGLWTDISVQILNVPQFEHLFTQPLGG-DIIPRSVLMVELG----------------G 601
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +D +G L + LG++P+ L + + G
Sbjct: 602 ACYLLCALGDGCLHYYTMDSETGQLRGGKRVVLGTKPIVLKQFKSDG 648
>gi|302837243|ref|XP_002950181.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
gi|300264654|gb|EFJ48849.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
nagariensis]
Length = 1104
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 118/298 (39%), Gaps = 77/298 (25%)
Query: 1 EFDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
E+D Y++++F T L L+ E ++E GF + TL C M + ++Q +R
Sbjct: 425 EYDKYLLLTFVGETRLLALNTEEELDEAELPGFDSGSQTLWCGNMATDHLLQASGSSVRL 484
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ + + VS+ + + I
Sbjct: 485 VDTAS---------------------------------------LQLVSEWRPAPGFAIH 505
Query: 119 RCAVNQRQIVIALQGGRLIYFEM--HPETGILD--ECSETIQMESEVLCMALS------- 167
A + Q+V+A GG L+Y E+ PE G+++ E S + ++SEV C+ +S
Sbjct: 506 VAAGSPTQVVVATGGGHLVYLEVVRRPE-GVVEVVEISNVV-LDSEVACVDVSPLMLQQQ 563
Query: 168 ----NAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASD 223
P G S +AVG D T++L+S+ L L G ++ V+
Sbjct: 564 PLAGEWPGGR--SSVVAVGRWDQTMQLLSVPSLAPLSSTPLGG--EVIPRSVLCTALEGV 619
Query: 224 PTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
P Y VGL +GAL +D +G LSD + LG++P+ L R
Sbjct: 620 P---------------YCMVGLGDGALHTWRLDPATGGLSDKKRLVLGTKPIMLRTFR 662
>gi|195500686|ref|XP_002097479.1| GE26244 [Drosophila yakuba]
gi|194183580|gb|EDW97191.1| GE26244 [Drosophila yakuba]
Length = 1140
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 62/282 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T CS + + ++QV D +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQVIQVTSDSVRLVS 479
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T V++ + + + I + N QIV+A
Sbjct: 480 SA-TKALVAEWRPTGDRSIGVVSCNTTQIVVA---------------------------S 511
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A + IVI E G L E S +E EV C+ ++ + S +A
Sbjct: 512 ACDIFYIVI--------------EDGSLREQSRR-TLEYEVACLDITPLDETQTKSDLVA 556
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D + ++SL + + L G + S++M G
Sbjct: 557 VGLWTDISAVIMSLPDLKTIYTEKLSG-EIIPRSILMTTFE----------------GIH 599
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++DQT+G L+D + LG++P L R
Sbjct: 600 YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
Length = 1102
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 64/280 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L ++I + +EE GF TL C N +VQV + +R +
Sbjct: 427 FDTFLVVSFISETRILAMNIEDELEETEIEGFLSEVQTLFCHDAVYNQLVQVTSNSVRLV 486
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAV-NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ TT ++ +K ++ V A N Q+++A GG L+Y E + D ++ K ++
Sbjct: 487 SS--TTRELRNKWDAPAGFSVNVATANASQVLLATGGGHLVYLE---IGDGTLTEVKHVL 541
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+E EV C+ ++ S+
Sbjct: 542 --------------------------------------LEYEVSCLDINPIGDNPNYSQL 563
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR+ L + ++ L G L+ G S
Sbjct: 564 AAVGMWTDISVRIFVLPDLTLITKEELGGEIIPRSVLLCAFEGIS--------------- 608
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +D + G L D + LG+RP+ L
Sbjct: 609 --YLLCALGDGHLLNFQLDTSCGKLRDRKKVSLGTRPITL 646
>gi|156841606|ref|XP_001644175.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156114812|gb|EDO16317.1| hypothetical protein Kpol_1059p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 1346
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMH--PETGILDECSETIQMESEVLCMALSNAPSGE 173
+IV + + Q+V+AL ++YFE+ + L+E M + ++LSN E
Sbjct: 575 RIVCASSTKSQLVLALSNCEIVYFEIEVDSQNDSLNELQSRADMGDLITSISLSNTNRSE 634
Query: 174 QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
+LAVGL ++ V+++SL+ L D ++ + A + SD
Sbjct: 635 ----YLAVGLKNSLVKILSLS------------LNDTETFFEVVSIQAVMSSVSD--IRI 676
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKI 280
+ ++ L+VGL++G LR + T G + D R +Y+G PV + I
Sbjct: 677 IQGLDMELHVGLKDGVYLRSKLSVTDGQIYDIRTKYMGPEPVLFYII 723
>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 1 [Ciona intestinalis]
Length = 1150
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 74/284 (26%)
Query: 6 IVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
+V+SF + +L + GE VEE GF + T CS + N +VQ+ IR I +
Sbjct: 428 LVISFVGHSRILQLSGEEVEETDLPGFDDESQTFYCSNVCHNQLVQITEKSIRLI-SHTE 486
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
+V + K + + I N+ Q+++A+ G L YFE+ P + I R V+
Sbjct: 487 RRQVHEWKPKNDRHISVATCNKSQVLLAI-GSSLHYFEIQP--------GEVIERACVD- 536
Query: 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMA---LSNAPSGEQMSRFL-- 179
+ EV C+ L + PS + F+
Sbjct: 537 --------------------------------LPHEVACLTIEPLVSDPSELEGPDFVTA 564
Query: 180 ---AVGLA-DNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGP 233
AVGL DNT R++ L L++ + Q L D + S+++++
Sbjct: 565 SICAVGLWNDNTARVLKLP---TLEEMHQQKLADEIIPRSILLVQFD------------- 608
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
G YL V L +G L ++ +G +SD + LG++P L
Sbjct: 609 ---GINYLLVTLGDGTLFYFTLNPETGYISDRKKVPLGTQPTSL 649
>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
DNA-binding protein 1) (UV-damaged DNA-binding factor)
(DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
(UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
pigmentosum group E-co... isoform 2 [Ciona intestinalis]
Length = 1142
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 74/284 (26%)
Query: 6 IVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNT 64
+V+SF + +L + GE VEE GF + T CS + N +VQ+ IR I +
Sbjct: 424 LVISFVGHSRILQLSGEEVEETDLPGFDDESQTFYCSNVCHNQLVQITEKSIRLI-SHTE 482
Query: 65 TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQ 124
+V + K + + I N+ Q+++A+ G L YFE+ P + I R V+
Sbjct: 483 RRQVHEWKPKNDRHISVATCNKSQVLLAI-GSSLHYFEIQP--------GEVIERACVD- 532
Query: 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMA---LSNAPSGEQMSRFL-- 179
+ EV C+ L + PS + F+
Sbjct: 533 --------------------------------LPHEVACLTIEPLVSDPSELEGPDFVTA 560
Query: 180 ---AVGLA-DNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGP 233
AVGL DNT R++ L L++ + Q L D + S+++++
Sbjct: 561 SICAVGLWNDNTARVLKLP---TLEEMHQQKLADEIIPRSILLVQFD------------- 604
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
G YL V L +G L ++ +G +SD + LG++P L
Sbjct: 605 ---GINYLLVTLGDGTLFYFTLNPETGYISDRKKVPLGTQPTSL 645
>gi|345498295|ref|XP_001607743.2| PREDICTED: DNA damage-binding protein 1-like [Nasonia vitripennis]
Length = 1140
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 63/282 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD +V+SF T +L + GE VEE GF T + ++ I+Q+ P R I
Sbjct: 423 FDNTLVLSFVGQTRILMLNGEEVEETEIPGFVADEQTFHTGNVTNDVIIQITPTSARLIS 482
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
K+++ +S+ + +K+ I A N Q++ C
Sbjct: 483 NKSSS-VISEWEPDNKRTISVVACNGTQVL-----------------------------C 512
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A G L Y E++ + I+ + T+Q EV C+ +S G ++ +A
Sbjct: 513 AT----------GNDLFYLEIN-DNQIVSKGYTTLQ--HEVACVDIS-PLDGSSEAKIVA 558
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D +VR+++L P+ K L G + S++M GN
Sbjct: 559 VGLWTDISVRILTL-PKLEEINKELLGGEIIPRSILMTCFE----------------GNT 601
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ +++ +G L+D + LG++P L R
Sbjct: 602 YLLCALGDGSMYYFTLNKQNGMLADKKKVTLGTQPTVLRTFR 643
>gi|332030156|gb|EGI69950.1| DNA damage-binding protein 1 [Acromyrmex echinatior]
Length = 1138
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 115/288 (39%), Gaps = 73/288 (25%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD +V+SF T +L++ GE VEE GF T + D+ +Q+ +R I
Sbjct: 419 HFDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTDDLFIQITSTSVRLI 478
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+N KIV VS+ + +K+ I
Sbjct: 479 SHEN--------------KIV-------------------------VSEWEPQNKRTISV 499
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ-----MESEVLCMALSNAPSGEQ 174
A N Q++ A G L Y E+ C++ + ++ EV C+ +S G
Sbjct: 500 VACNGTQVLCA-TGNDLFYIEI--------ICNQIVSKGFVTLQHEVACLDIS-PLDGVN 549
Query: 175 MSRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
++ +AVGL D +VR+++L P K L G + S++M
Sbjct: 550 EAKIVAVGLWTDISVRILTL-PNLEEINKELLGGEIIPRSILMTCFE------------- 595
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
GN YL L +G++ ++ + SG LSD + LG++P L R
Sbjct: 596 ---GNTYLLCALGDGSMYYFILHRQSGMLSDKKKVTLGTQPTVLRTFR 640
>gi|195571247|ref|XP_002103615.1| GD18880 [Drosophila simulans]
gi|194199542|gb|EDX13118.1| GD18880 [Drosophila simulans]
Length = 1140
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 62/282 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T CS + + ++QV D +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVS 479
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + + E P D+ +V C
Sbjct: 480 SAT---------------------------------KALVAEWRPTGDRSIG----VVSC 502
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N QI++A I++ + + + ++C T+ E V C+ ++ ++ S +A
Sbjct: 503 --NTTQILVA--SACDIFYIVIEDGNLREQCRRTLAYE--VACLDITPLDETQKKSDLVA 556
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D + ++SL + + + L G + S++M G
Sbjct: 557 VGLWTDISAVILSLPDLETIYTEKLSG-EIIPRSILMTTFE----------------GIH 599
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++DQT+G L+D + LG++P L R
Sbjct: 600 YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|50302849|ref|XP_451361.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607703|sp|Q6CXH8.1|RSE1_KLULA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49640492|emb|CAH02949.1| KLLA0A08129p [Kluyveromyces lactis]
Length = 1269
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 63/282 (22%)
Query: 1 EFDAYIVVSFSNATLVLSIGE-TVEEVSGSG--FYGTTPTLCCSAMGDNSIVQVYPDGIR 57
E + I +S +T +L I E TVE+ G F P+L AM SI+QV D
Sbjct: 489 ETHSLIFLSMETSTTILKIHEGTVEDFGGDSNPFILNKPSLFVGAMVQRSIIQVTRD--- 545
Query: 58 HIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKI 117
C + QI+ G E +P + I
Sbjct: 546 ------------------------CLL---QIIEMHDGPYTKKLEWYPPA------GVGI 572
Query: 118 VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSR 177
V N+ Q+V+AL + YFE+ ++ L+E + ++M+S V +AL Q S
Sbjct: 573 VTAFCNETQLVVALTNHEICYFEIIEDS--LNELQDRVEMDSTVNSIALLAG----QKSG 626
Query: 178 FLAVGLADNTVRLISLAPQ--DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235
+ +G D+++++++L + D +Q L SL+ + +SD
Sbjct: 627 YCVLGCEDSSLQILNLQSKHPDFFTICAIQSLISKPHSLLFMR------DTSD------- 673
Query: 236 LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
L ++VG+++G L ++ G + D R R++G++PV++
Sbjct: 674 ---LKIHVGMKSGVYLSSKLNINDGTVFDVRTRFVGTKPVQV 712
>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
Length = 674
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 68/286 (23%)
Query: 5 YIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAK 62
Y+VVSF + T L +++ + +EE GF T TL C ++ ++QV + +R
Sbjct: 2 YLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVR----- 56
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA- 121
+V C R++V D+ + V A
Sbjct: 57 ----------------LVSCT--SRELV-----------------DQWNAPAGFSVNVAS 81
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQM--SRFL 179
N Q+++A GG L+Y E+ L E Q+E E+ C+ L+ P GE + S
Sbjct: 82 ANASQVLLATGGGHLVYLEIRDAK--LVEVKHA-QLEHEISCLDLN--PIGEHLEYSSLA 136
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL ++++NL G L+ G S
Sbjct: 137 AVGMWTDISVRIFSLPDLVLIRKENLGGEIVPRSVLLCTLEGVS---------------- 180
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +++ ++G+L+D + LG++P+ L +G
Sbjct: 181 -YLLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKG 225
>gi|157128866|ref|XP_001655232.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882187|gb|EAT46412.1| AAEL002407-PA [Aedes aegypti]
Length = 980
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 108/282 (38%), Gaps = 62/282 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+D +V+SF T +L++ GE VEE GF T C+ + I+QV P R I
Sbjct: 422 YDNTLVLSFVGHTRILTLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQVTPTTARLIQ 481
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N + + + K D K+I A N Q+V C
Sbjct: 482 CDNKSM-ICEWKPPDDKRISVVACNSCQMV-----------------------------C 511
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A I + +L++ T+ ++ EV C+ +S + +A
Sbjct: 512 ATACDIYYIEIGESKLVH-------------KSTVTLDYEVACLDISPLEDNATHAELVA 558
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D + ++ L + + + L G + S++M G +
Sbjct: 559 VGLWTDISACILRLPNLEVVHTEKLGG-EIIPRSILMAHFE----------------GIV 601
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ V+D+ + L+D + LG++P L R
Sbjct: 602 YLLCALGDGSMFYFVLDKNTNRLTDQKKVTLGTQPTILKTFR 643
>gi|367003052|ref|XP_003686260.1| hypothetical protein TPHA_0F03460 [Tetrapisispora phaffii CBS 4417]
gi|357524560|emb|CCE63826.1| hypothetical protein TPHA_0F03460 [Tetrapisispora phaffii CBS 4417]
Length = 1334
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 60/283 (21%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTP---TLCCSAMGDNSIVQVYPDGI 56
+F +++ ++N+T +L+I +++EE+ T T+ +G+ SI+QV
Sbjct: 491 KFHKILILGYTNSTTMLNIENDSIEELQLEDNPFITKGDNTILAELIGNRSIIQV----- 545
Query: 57 RHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKK 116
C QI + + + + +P + +
Sbjct: 546 -------------------------CENEMHQITLGTENNFKLKLKWYPPAGIR------ 574
Query: 117 IVRCAVNQRQIVIALQGGRLIYFEMH--PETGILDECSETIQMESEVLCMALSNAPSGEQ 174
I A QI +AL + YFE++ ++ ++E I++ + C++ N+
Sbjct: 575 ITSAACTASQIALALSNYEIAYFELNQFSDSDDINELQRRIEIGESISCLSFENSLK--- 631
Query: 175 MSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPV 234
S++LA+G +TV+++S+ G D + L +I M A SD V
Sbjct: 632 -SKYLAIGCQGSTVKIVSV----------YNGSSD--DFLEIISMQAVMAPVSD--IKLV 676
Query: 235 TLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
NL L+VGL NG ++ + D R RY+G V L
Sbjct: 677 RSNNLNLHVGLSNGVYNTSKINDVDSQIYDTRTRYIGPSKVNL 719
>gi|70952260|ref|XP_745310.1| splicing factor 3b, subunit 3, 130kD [Plasmodium chabaudi chabaudi]
gi|56525593|emb|CAH80831.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium chabaudi
chabaudi]
Length = 530
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVY 52
E+D YI+VSF TL+L IGETVEEV S T+ + + DNS +QVY
Sbjct: 479 EYDGYIIVSFEGNTLILEIGETVEEVYDSLLLTNVTTIHINLLYDNSFIQVY 530
>gi|157128864|ref|XP_001655231.1| DNA repair protein xp-e [Aedes aegypti]
gi|108882186|gb|EAT46411.1| AAEL002407-PB [Aedes aegypti]
Length = 1138
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 108/282 (38%), Gaps = 62/282 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+D +V+SF T +L++ GE VEE GF T C+ + I+QV P R I
Sbjct: 422 YDNTLVLSFVGHTRILTLSGEEVEETEIPGFLSDQQTFYCANVDFGQIIQVTPTTARLIQ 481
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
N + + + K D K+I A N Q+V C
Sbjct: 482 CDNKSM-ICEWKPPDDKRISVVACNSCQMV-----------------------------C 511
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A I + +L++ T+ ++ EV C+ +S + +A
Sbjct: 512 ATACDIYYIEIGESKLVH-------------KSTVTLDYEVACLDISPLEDNATHAELVA 558
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D + ++ L + + + L G + S++M G +
Sbjct: 559 VGLWTDISACILRLPNLEVVHTEKLGG-EIIPRSILMAHFE----------------GIV 601
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ V+D+ + L+D + LG++P L R
Sbjct: 602 YLLCALGDGSMFYFVLDKNTNRLTDQKKVTLGTQPTILKTFR 643
>gi|195329354|ref|XP_002031376.1| GM24084 [Drosophila sechellia]
gi|194120319|gb|EDW42362.1| GM24084 [Drosophila sechellia]
Length = 1140
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 62/282 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T CS + + ++QV D +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVS 479
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T V++ + + + I + N QI++A
Sbjct: 480 SA-TKALVAEWRPTGDRSIGVVSCNTTQILVA---------------------------S 511
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A + IVI E G L E S + EV C+ ++ ++ S +A
Sbjct: 512 ACDIFYIVI--------------EDGSLREQSRR-TLAYEVACLDITPLDETQKKSDLVA 556
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D + ++SL + + + L G + S++M G
Sbjct: 557 VGLWTDISAVILSLPDLETIYTEKLSG-EIIPRSILMTTFE----------------GIH 599
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++DQT+G L+D + LG++P L R
Sbjct: 600 YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|403216596|emb|CCK71092.1| hypothetical protein KNAG_0G00350 [Kazachstania naganishii CBS
8797]
Length = 1263
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 28/165 (16%)
Query: 117 IVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMS 176
IV A Q Q+ +AL +IYFE++PET L E ++ + MES++ ++L S
Sbjct: 559 IVSAASTQTQLALALSNSEIIYFEIYPETNTLIESTKILTMESKIKSISLDIT---SNRS 615
Query: 177 RFLAVGLADN----TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAG 232
F+ V ++ V++ S +PQ ++ +LQ D ++++E
Sbjct: 616 IFMVVATEEDQLVSIVKVQSQSPQ-FMEVVSLQRQGDAINEVLLVES------------- 661
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
+++GL NG +R + ++ + +Y+G +P+ +
Sbjct: 662 -------VIHIGLMNGVYVRSTMSLRDSEIVASSEKYIGGKPITM 699
>gi|21357503|ref|NP_650257.1| piccolo [Drosophila melanogaster]
gi|74872881|sp|Q9XYZ5.1|DDB1_DROME RecName: Full=DNA damage-binding protein 1; Short=D-DDB1; AltName:
Full=Damage-specific DNA-binding protein 1; AltName:
Full=Protein piccolo
gi|4928452|gb|AAD33592.1|AF132145_1 damage-specific DNA binding protein DDBa p127 subunit [Drosophila
melanogaster]
gi|7299719|gb|AAF54901.1| piccolo [Drosophila melanogaster]
gi|220942640|gb|ACL83863.1| DDB1-PA [synthetic construct]
Length = 1140
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 62/282 (21%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T CS + + ++QV D +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCSNVDYDQLIQVTSDSVRLVS 479
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T V++ + + + I + N QI++A
Sbjct: 480 SA-TKALVAEWRPTGDRTIGVVSCNTTQILVA---------------------------S 511
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
A + IVI E G L E S + EV C+ ++ ++ S +A
Sbjct: 512 ACDIFYIVI--------------EDGSLREQSRR-TLAYEVACLDITPLDETQKKSDLVA 556
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D + ++SL + + + L G + S++M G
Sbjct: 557 VGLWTDISAVILSLPDLETIYTEKLSG-EIIPRSILMTTFE----------------GIH 599
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++DQT+G L+D + LG++P L R
Sbjct: 600 YLLCALGDGSMYYFIMDQTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|195395112|ref|XP_002056180.1| GJ10363 [Drosophila virilis]
gi|194142889|gb|EDW59292.1| GJ10363 [Drosophila virilis]
Length = 1140
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF T C+ + + ++QV + +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQTFLCANVDYDQLIQVTAESVRLVK 479
Query: 61 AKNTTWKVSDKKESDKK-KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ T K E D+ +V C N QIV A R I++
Sbjct: 480 SATKTLVGEWKPEGDRSIGVVSC--NSTQIVAA--SAREIFY------------------ 517
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
I+++ G L+ ++C +T+ E V C+ ++ + S +
Sbjct: 518 ---------ISIEDGSLV-----------EKCRKTLPYE--VACLDVTPLDEKQTKSELV 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + ++ L + + + L G + S++M +
Sbjct: 556 AVGLWTDISAVILRLPDLETIYTEKLSG-EIIPRSILMTTFEDIN--------------- 599
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++D+T+G L+D + LG++P L R
Sbjct: 600 -YLLCALGDGSMYYFILDRTTGQLTDKKKVTLGTQPTTLRTFR 641
>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
Length = 1088
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L ++I + +EE GF TL C N +VQV +R +
Sbjct: 413 FDTFLVVSFISETRILAMNIEDELEETEIEGFCSQVQTLFCHCAVFNQLVQVTSSSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ TT ++ + + + A
Sbjct: 473 SS--TTRELRQEWNAPSGYSINVA------------------------------------ 494
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G L + Q+E E+ C+ ++ S+
Sbjct: 495 -TANATQVLLATGGGHLVYLEI--GDGTLTQAKHA-QLECEISCLDINPIGENPNYSQLA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL + + ++ L G + S+++ G
Sbjct: 551 AVGMWTDISVRIFSLPDLNLITKEPLGG-EIIPRSVLLCSFE----------------GI 593
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G L D + LG++P+ L
Sbjct: 594 AYLLCALGDGHLLNFLLNLSTGGLKDRKKVSLGTQPITL 632
>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
Length = 1158
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 110/289 (38%), Gaps = 67/289 (23%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D +V+SF T VL + GE +EE G T C +G +S++Q+ +R I
Sbjct: 424 DDTVVLSFVGQTRVLMLNGEEMEETEIPGLTADQQTFFCGNVGKDSVLQITTGSVRLISV 483
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
NT K+S+ D K + A N Q++ CA
Sbjct: 484 -NTKQKLSEWTPPDGKMLNVVACNHGQVL-----------------------------CA 513
Query: 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQM------ 175
G L Y EM +T ++ + ++ EV C+ L+ G Q
Sbjct: 514 A----------GRELYYLEMEDDTQVV--LKTHVTLDYEVACLDLTPISIGSQQNTTVSK 561
Query: 176 SRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPV 234
+ AVGL D + RL+ L + ++ L G ++ +++ + P
Sbjct: 562 AEVCAVGLWTDISARLLKLPTLEEFHKEPLGG--EIIPRSILMALFEGTP---------- 609
Query: 235 TLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
YL V L +G+L ++ + L D + LG++P L R Q
Sbjct: 610 -----YLLVALGDGSLFYFSMNPVTKLLGDRKKVTLGTQPTVLRPFRSQ 653
>gi|322787057|gb|EFZ13281.1| hypothetical protein SINV_13198 [Solenopsis invicta]
Length = 986
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 74/288 (25%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD +V+SF T +L++ GE VEE GF T + ++ +Q+ P +R I
Sbjct: 419 HFDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSVRLI 478
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
S + K+V +S+ + +K+ I
Sbjct: 479 --------------SYESKMV-------------------------ISEWEPQNKRTISV 499
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ-----MESEVLCMALSNAPSGEQ 174
A N Q++ A G L Y E+ C++ + ++ EV C+ +S P
Sbjct: 500 VACNGTQVLCA-TGNDLFYIEI--------SCNQIVSKGFVTLQHEVACLDIS--PLDGN 548
Query: 175 MSRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
++ +AVGL D +VR++ L P K L G + S++M
Sbjct: 549 EAKIVAVGLWTDISVRILIL-PNLEEINKELLGGEIIPRSILMTCFE------------- 594
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
GN YL L +G++ ++ + +G LSD + LG++P L R
Sbjct: 595 ---GNTYLLCALGDGSMYYFILHKQTGILSDKKKVTLGTQPTVLRTFR 639
>gi|195108657|ref|XP_001998909.1| GI23368 [Drosophila mojavensis]
gi|193915503|gb|EDW14370.1| GI23368 [Drosophila mojavensis]
Length = 1140
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 66/284 (23%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF + C+ + + ++QV + +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETEIPGFASDLQSFLCANVEYDQLIQVTAESVRLVK 479
Query: 61 AKNTTWKVSDKKESDKK-KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ K E D+ +V C N QIV A R I++
Sbjct: 480 SSTKALVGEWKPEGDRSIGVVSC--NSTQIVAA--SAREIFY------------------ 517
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
IA++ G L+ ++C +T+ E V C+ ++ + S +
Sbjct: 518 ---------IAIEDGSLV-----------EKCRKTLAYE--VACLDVTPLDEKQNKSELV 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + ++SL + + + L G + S++M T +
Sbjct: 556 AVGLWTDISAVILSLPDLETIYTEKLSG-EIIPRSILM-----------------TTFED 597
Query: 239 L-YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+ YL L +G++ ++D+T+G L+D + LG++P L R
Sbjct: 598 IHYLLCALGDGSMYYFILDRTTGFLTDKKKVTLGTQPTTLRTFR 641
>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
Length = 1089
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 62/278 (22%)
Query: 3 DAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D ++VVSF + T L +++ + +EE GF TL C + +VQV +R +G
Sbjct: 414 DTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVG 473
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + + K S V A
Sbjct: 474 STSRELRNEWKAPSGYSVNVATA------------------------------------- 496
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+++A GG L+Y E+ G L E Q+E ++ C+ ++ S+ A
Sbjct: 497 --NATQVLLATGGGHLVYLEI--GDGTLTEVKHA-QLEYDISCLDINPIGENPNFSQLAA 551
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VG+ D +VR+ SL + + ++ L G + S+++ G
Sbjct: 552 VGMWTDISVRIFSLPDLNLITKEYLGG-EIIPRSVLLCSFE----------------GIP 594
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G+L+D + LG++P+ L
Sbjct: 595 YLLCALGDGHLLNFLLNMSTGELTDRKKVSLGTQPITL 632
>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
Length = 1043
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 62/278 (22%)
Query: 3 DAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D ++VVSF + T L +++ + +EE GF TL C + +VQV +R +G
Sbjct: 414 DTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVG 473
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + + K S V A
Sbjct: 474 STSRELRNEWKAPSGYSVNVATA------------------------------------- 496
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+++A GG L+Y E+ G L E Q+E ++ C+ ++ S+ A
Sbjct: 497 --NATQVLLATGGGHLVYLEI--GDGTLTEVKHA-QLEYDISCLDINPIGENPNFSQLAA 551
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VG+ D +VR+ SL + + ++ L G + S+++ G
Sbjct: 552 VGMWTDISVRIFSLPDLNLITKEYLGG-EIIPRSVLLCSFE----------------GIP 594
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G+L+D + LG++P+ L
Sbjct: 595 YLLCALGDGHLLNFLLNMSTGELTDRKKVSLGTQPITL 632
>gi|452824087|gb|EME31092.1| DNA damage-binding protein 1 isoform 1 [Galdieria sulphuraria]
Length = 1128
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 114/278 (41%), Gaps = 60/278 (21%)
Query: 10 FSNATLVLSI--GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWK 67
F++ + VL + E + E + F PTL C + + IVQ+ P R I ++ +
Sbjct: 429 FASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQITPSKARLISCEDMSI- 487
Query: 68 VSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQI 127
V++ +I + N Q++IA GG LIYF++ +++ K+I+ + +
Sbjct: 488 VNEWHPPSGFRISVASGNSMQLIIATTGGNLIYFDI-------DANPKRIMEKSYKSLEY 540
Query: 128 VIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL-ADN 186
I CS ++ L A N S S F+AVG+ +
Sbjct: 541 EI---------------------CS----LDISPLGQAGMNLASQAIPSSFVAVGMWTEV 575
Query: 187 TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQ 246
++R SL D + + L GL +A SL+ + M D Y L
Sbjct: 576 SIRFYSLPSLDLIHTEKL-GLDVIARSLLFVTMDGED----------------YFLAALG 618
Query: 247 NGALLRMVVDQTSGD-------LSDNRMRYLGSRPVKL 277
+G LL +D+++ D L D R +G++P L
Sbjct: 619 DGRLLTYRLDKSAKDTDSEKKFLYDQRQMSIGTQPASL 656
>gi|350537001|ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
gi|350539125|ref|NP_001233864.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA damage-binding protein 1; AltName: Full=High
pigmentation protein 1; AltName: Full=UV-damaged
DNA-binding protein 1
gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
gi|42602165|gb|AAS21683.1| UV-damaged DNA binding protein 1 [Solanum lycopersicum]
Length = 1090
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D ++VVSF + T VL++ + +EE GF TL C N +VQV + +R +
Sbjct: 413 YDTFLVVSFISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ + K ++ V +VN
Sbjct: 473 SSTSRDLK------NEWFAPVGYSVNV--------------------------------- 493
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G+L+E +++ ++ C+ ++ S
Sbjct: 494 ATANATQVLLATGGGHLVYLEIG--DGVLNEVKYA-KLDYDISCLDINPIGENPNYSNIA 550
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL + + ++ L G + S++M G
Sbjct: 551 AVGMWTDISVRIYSLPDLNLITKEQLGG-EIIPRSVLMCSFE----------------GI 593
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL V+ ++G+L+D + LG++P+ L
Sbjct: 594 SYLLCALGDGHLLNFVLSMSTGELTDRKKVSLGTQPITL 632
>gi|452824086|gb|EME31091.1| DNA damage-binding protein 1 isoform 2 [Galdieria sulphuraria]
Length = 1150
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 114/278 (41%), Gaps = 60/278 (21%)
Query: 10 FSNATLVLSI--GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWK 67
F++ + VL + E + E + F PTL C + + IVQ+ P R I ++ +
Sbjct: 429 FASESRVLELVSTELMAEANFPVFEMQEPTLYCGNVVGDCIVQITPSKARLISCEDMSI- 487
Query: 68 VSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQI 127
V++ +I + N Q++IA GG LIYF++ +++ K+I+ + +
Sbjct: 488 VNEWHPPSGFRISVASGNSMQLIIATTGGNLIYFDI-------DANPKRIMEKSYKSLEY 540
Query: 128 VIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGL-ADN 186
I CS ++ L A N S S F+AVG+ +
Sbjct: 541 EI---------------------CS----LDISPLGQAGMNLASQAIPSSFVAVGMWTEV 575
Query: 187 TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQ 246
++R SL D + + L GL +A SL+ + M D Y L
Sbjct: 576 SIRFYSLPSLDLIHTEKL-GLDVIARSLLFVTMDGED----------------YFLAALG 618
Query: 247 NGALLRMVVDQTSGD-------LSDNRMRYLGSRPVKL 277
+G LL +D+++ D L D R +G++P L
Sbjct: 619 DGRLLTYRLDKSAKDTDSEKKFLYDQRQMSIGTQPASL 656
>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
Length = 1068
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 111/278 (39%), Gaps = 62/278 (22%)
Query: 3 DAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D ++VVSF + T L +++ + +EE GF TL C + +VQV +R +G
Sbjct: 393 DTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVYDQLVQVTSSSVRLVG 452
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + + K S V A
Sbjct: 453 STSRELRNEWKAPSGYSVNVATA------------------------------------- 475
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N Q+++A GG L+Y E+ G L E Q+E ++ C+ ++ S+ A
Sbjct: 476 --NATQVLLATGGGHLVYLEI--GDGTLTEVKHA-QLEYDISCLDINPIGENPNFSQLAA 530
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VG+ D +VR+ SL P L K G + S+++ G
Sbjct: 531 VGMWTDISVRIFSL-PDLNLITKEYLGGEIIPRSVLLCSFE----------------GIP 573
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ ++G+L+D + LG++P+ L
Sbjct: 574 YLLCALGDGHLLNFLLNMSTGELTDRKKVSLGTQPITL 611
>gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName:
Full=UV-damaged DNA-binding protein 1
gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
Length = 1095
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 117/279 (41%), Gaps = 62/279 (22%)
Query: 2 FDAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
+D ++VVSF + T VL++ + +EE GF TL C N +VQV + +R +
Sbjct: 418 YDTFLVVSFISETRVLAMNLEDELEETEIEGFNSQVQTLFCHDAVYNQLVQVTSNSVRLV 477
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ + K ++ V +VN
Sbjct: 478 SSTSRDLK------NEWFAPVGYSVNV--------------------------------- 498
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
N Q+++A GG L+Y E+ G+L+E + +++ ++ C+ ++ S
Sbjct: 499 ATANATQVLLATGGGHLVYLEI--GDGVLNEV-KYAKLDYDISCLDINPIGENPNYSNIA 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVG+ D +VR+ SL + + ++ L G + S++M G
Sbjct: 556 AVGMWTDISVRIYSLPDLNLITKEQLGG-EIIPRSVLMCSFE----------------GI 598
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL V+ ++G+L+D + LG++P+ L
Sbjct: 599 SYLLCALGDGHLLNFVLSMSTGELTDRKKVSLGTQPITL 637
>gi|390603312|gb|EIN12704.1| hypothetical protein PUNSTDRAFT_97523 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1268
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 115 KKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQME-SEVLCMALSNAPSGE 173
++IV ++N QI + L+GGRL F + P ++ + S V C+ L+ G
Sbjct: 646 QEIVTASINPTQIALGLRGGRLCVFRLAPNDHFDLRFTQHFSNDISAVSCLPLN---PGN 702
Query: 174 QMSRFLAVGLADNTVRLISLAPQDCLKQKNLQG--LPDLAESLVMIEMGAS----DPTSS 227
+S F+AVG + +I L + + + LQ LP L SL++ G S DP
Sbjct: 703 LISAFIAVGFWGSNNVMI-LCQKGNILELELQTDPLPALPRSLLLYNFGTSFGKKDPNY- 760
Query: 228 DEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEA 287
+ +L +GL +G+L+ + +L D ++ LG+ PV L G +A
Sbjct: 761 ----------HAHLLIGLADGSLVSYAYARK--ELKDKKVVPLGASPVSLVPCEANGKKA 808
Query: 288 NY 289
+
Sbjct: 809 IF 810
>gi|449661926|ref|XP_002167992.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Hydra magnipapillata]
Length = 1122
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTL-CCSAMGDNSIVQVYPDGIRHIG 60
+ +Y+++S ++T+VL G + E+ SGF PT+ C+ + + I+QV P I +
Sbjct: 514 YHSYLILSRDDSTMVLKTGAEITELDNSGFNVQQPTIFACNHLSNKYILQVCPQSIHLL- 572
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEM 103
T +++ D KI +C+++ +V+ G+LIY ++
Sbjct: 573 --EDTVQINSISLQDTIKITQCSISDPYVVMVDSTGQLIYLQV 613
>gi|307205760|gb|EFN83990.1| DNA damage-binding protein 1 [Harpegnathos saltator]
Length = 1138
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 114/282 (40%), Gaps = 63/282 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD +V+SF T +L++ GE VEE GF T + ++ +Q+ P R I
Sbjct: 420 FDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLI- 478
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T VS+ + +K+ I A N Q++ A G L Y E+
Sbjct: 479 SHETKIVVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYMEI----------------- 520
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
NQ I+ + T+Q EV C+ +S G ++ +A
Sbjct: 521 ICNQ----------------------IVPKGFATLQ--HEVACLDISPL-DGISEAKIVA 555
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D +VR+++L + + K L G + S++M GN
Sbjct: 556 VGLWTDISVRILTLPGLEEI-NKELLGGEIIPRSILMTCFE----------------GNT 598
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ + + +G LSD + LG++P L R
Sbjct: 599 YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFR 640
>gi|409049568|gb|EKM59045.1| hypothetical protein PHACADRAFT_181065 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1268
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 115 KKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQ 174
K+IV ++N Q +AL GG + F + P+ G L+ E+ ++ + +
Sbjct: 642 KEIVAASINPSQFAVALNGGTFLLFNLSPD-GQLNLLQTREFHGKEIAALSCAPLDPSKN 700
Query: 175 MSRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233
S F+AV NTV L+S LP LA SL++ GA T D P
Sbjct: 701 FSPFVAVSFWGSNTVTLLSTKDPALGTHTESAPLPALAHSLLLHNFGAGRST-RDADFQP 759
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
Y+ GL +G + V + +L D ++ LG+ PV L
Sbjct: 760 ------YVVAGLVDGTV--ACVSFRNNELRDQKLFALGAAPVSL 795
>gi|350410909|ref|XP_003489174.1| PREDICTED: DNA damage-binding protein 1-like [Bombus impatiens]
Length = 1141
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 112/282 (39%), Gaps = 63/282 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD +V+SF T +L++ GE VEE GF T + ++ +Q+ P R I
Sbjct: 423 FDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLIS 482
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T VS+ + +K+ I A N Q++ A G L Y E + C
Sbjct: 483 HETKT-VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYME---------------ISC 525
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
I+ + T+Q EV C+ +S G ++ A
Sbjct: 526 G------------------------QIVPKGFATLQY--EVACLDISPL-DGHTEAKIAA 558
Query: 181 VGLADN-TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL + +VR+++L + + K L G + S++M GN
Sbjct: 559 VGLWTHISVRILTLPALEEI-NKELLGGEIIPRSILMTCFE----------------GNT 601
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ + + +G LSD + LG++P L R
Sbjct: 602 YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFR 643
>gi|219125301|ref|XP_002182922.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217405716|gb|EEC45658.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 1284
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 126 QIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLAD 185
QI +AL GG+++Y ++ E G + ECS QME EV C+ L+ + S FLAVGL D
Sbjct: 591 QIAVALNGGKVLYLKI--EEGKIRECSGQ-QMEREVSCLNLNPFAATSHTSSFLAVGLWD 647
Query: 186 N-TVRLI 191
+ TVRL
Sbjct: 648 DFTVRLF 654
>gi|354491124|ref|XP_003507706.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform 2 [Cricetulus griseus]
Length = 1388
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 570 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 629
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 630 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSXXSHPHRLALHKPPLH 686
Query: 124 QRQIVIAL 131
+ VIAL
Sbjct: 687 HQSKVIAL 694
>gi|307186138|gb|EFN71863.1| DNA damage-binding protein 1 [Camponotus floridanus]
Length = 1136
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 73/287 (25%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD +V+SF T +L++ GE VEE GF T + ++ +Q+ P R I
Sbjct: 420 FDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLI- 478
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
S + K+V VS+ + +K+ I
Sbjct: 479 -------------SHESKMV-------------------------VSEWEPQNKRTISVV 500
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETI-----QMESEVLCMALSNAPSGEQM 175
A N Q++ A G L Y E+ C++ + ++ EV C+ +S G
Sbjct: 501 ACNGTQVLCA-TGNDLFYMEI--------SCNQIVPKGFATLQHEVACLDISPL-DGVNE 550
Query: 176 SRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPV 234
++ +AVGL D +VR+++L + + K L G + S++M
Sbjct: 551 AKIVAVGLWTDISVRILTLPGLEEI-NKELLGGEIIPRSILMTCFE-------------- 595
Query: 235 TLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
GN YL L +G++ + + +G LSD + LG++P L R
Sbjct: 596 --GNTYLLCALGDGSMYYFTLYKQNGVLSDKKRVTLGTQPTVLRTFR 640
>gi|354491122|ref|XP_003507705.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform 1 [Cricetulus griseus]
Length = 1441
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 572 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 631
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 632 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSXXSHPHRLALHKPPLH 688
Query: 124 QRQIVIAL 131
+ VIAL
Sbjct: 689 HQSKVIAL 696
>gi|340714589|ref|XP_003395809.1| PREDICTED: DNA damage-binding protein 1-like [Bombus terrestris]
Length = 1141
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 112/282 (39%), Gaps = 63/282 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD +V+SF T +L++ GE VEE GF T + ++ +Q+ P R I
Sbjct: 423 FDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLIS 482
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T VS+ + +K+ I A N Q++ A G L Y E+
Sbjct: 483 HETKT-VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYMEIS---------------- 524
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
Y ++ P+ ++ EV C+ +S G ++ A
Sbjct: 525 -----------------YGQIVPKG--------FATLQYEVACLDISPL-DGHTEAKIAA 558
Query: 181 VGLADN-TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL + +VR+++L + + K L G + S++M GN
Sbjct: 559 VGLWTHISVRILTLPALEEI-NKELLGGEIIPRSILMTCFE----------------GNT 601
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ + + +G LSD + LG++P L R
Sbjct: 602 YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFR 643
>gi|156389050|ref|XP_001634805.1| predicted protein [Nematostella vectensis]
gi|156221892|gb|EDO42742.1| predicted protein [Nematostella vectensis]
Length = 1157
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 106 VSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMA 165
VS+ K K I + N Q+V A+ G L Y E+ P G L + S+ + +E EV C+
Sbjct: 496 VSEWKHPSAKNISVASCNTEQVVAAV-GSELYYIEIMP--GELRQISQ-VTLEYEVACLD 551
Query: 166 LSNAPSGEQMSRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDP 224
++ G+ + +AVGL D +VR++ LP L + V + G P
Sbjct: 552 ITPTVEGKSRADMVAVGLWTDISVRVLQ--------------LPKLNQLHVQMLGGEIIP 597
Query: 225 TSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
S + A G YL L +G L +D ++G L++ + LG++P L
Sbjct: 598 RSILKTAFE---GIHYLLCALGDGTLFYFTMDPSTGALAECKKVTLGTQPTML 647
>gi|354491126|ref|XP_003507707.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform 3 [Cricetulus griseus]
Length = 1449
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 572 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 631
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 632 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSXXSHPHRLALHKPPLH 688
Query: 124 QRQIVIAL 131
+ VIAL
Sbjct: 689 HQSKVIAL 696
>gi|383863765|ref|XP_003707350.1| PREDICTED: DNA damage-binding protein 1-like [Megachile rotundata]
Length = 1138
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 110/287 (38%), Gaps = 73/287 (25%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD +V+SF T +L++ GE VEE GF T + ++ +Q+ P R I
Sbjct: 423 FDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLIS 482
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T VS+ + +K+ I
Sbjct: 483 HETKT---------------------------------------VVSEWEPENKRTISVV 503
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETI-----QMESEVLCMALSNAPSGEQM 175
A N Q++ A G L Y E+ C + + ++ EV C+ +S G
Sbjct: 504 ACNGTQVLCA-TGNDLFYMEI--------SCGQIVPKGFATLQYEVACLDISPL-DGNTE 553
Query: 176 SRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPV 234
++ AVGL D +VR+++L + + K L G + S++M
Sbjct: 554 AKIAAVGLWTDISVRILTLPALEEI-NKELLGGEIIPRSILMTCFE-------------- 598
Query: 235 TLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
GN YL L +G++ + + +G LSD + LG++P L R
Sbjct: 599 --GNTYLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFR 643
>gi|334326317|ref|XP_001364707.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Monodelphis domestica]
Length = 1449
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 579 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDNRYIVQVSPLGIRLLEGV 638
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + + +
Sbjct: 639 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRNHRLALHKPPL 695
Query: 123 NQRQIVIAL 131
+ + VIAL
Sbjct: 696 HHQSKVIAL 704
>gi|395512730|ref|XP_003760588.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Sarcophilus harrisii]
Length = 1449
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 579 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDNRYIVQVSPLGIRLLEGV 638
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + + +
Sbjct: 639 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRNHRLALHKPPL 695
Query: 123 NQRQIVIAL 131
+ + VIAL
Sbjct: 696 HHQSKVIAL 704
>gi|299743623|ref|XP_001835883.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
gi|298405741|gb|EAU85948.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
Length = 1282
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 33/187 (17%)
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSE--TIQMESEVLCMALSNAPSGE 173
+IV +N Q+V+AL GGRL+ + E + +E T++ S V C A A +
Sbjct: 633 EIVAADINPTQVVLALSGGRLVVLRHNEEGTAFELVAEKNTLREISAVSCQA---ADTKT 689
Query: 174 QMSRFLAVGLA----------DNTVRLISLAPQD----------CLKQKNLQGLPDLAES 213
++ VG D V ++ L + CL + + + +P L S
Sbjct: 690 PYTKVFLVGYWEQVAEADTDRDTVVEILELERRSNPGSGTPSLTCLVKVSKKYVPALPRS 749
Query: 214 LVMIEMGASD--PTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG-DLSDNRMRYL 270
L++ G D PT+ + P +L+ GL +G++ VV + G +++D+++ L
Sbjct: 750 LLLYSFGVPDSEPTNLKPNSQPT-----HLFCGLADGSVAHFVVWKDGGLNVTDSKIVPL 804
Query: 271 GSRPVKL 277
G+ PVK
Sbjct: 805 GTTPVKF 811
>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
Length = 1092
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 66/289 (22%)
Query: 1 EFDAYIVVSFSNATLVLSIG-ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
++D Y++ SF N T VL I E + E GF T+ CS + + ++Q+ +R +
Sbjct: 413 QYDKYLIQSFVNETRVLEIADEELSETEIDGFDHNAQTIFCSNVLGDCLLQITEVSLRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
K+ K++++ E P + ++I
Sbjct: 473 STKS-------------KQLLK--------------------EWFP------PNGERITV 493
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQ----M 175
N +Q+V+ LIY ++ G + E I+M+ E+ C+ L+ P GE+
Sbjct: 494 AGGNVQQVVLTSGKRTLIYLDV--SNGDVTEVKR-IEMDQEIACLNLN--PLGEKSDHNK 548
Query: 176 SRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235
S F+AVG + ++ ++ L + + +++ G + SL+++ + D
Sbjct: 549 SDFVAVGHWNLSLSMLRLPSMEVVCTESIGG-DAIPRSLLLVTLEGVD------------ 595
Query: 236 LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
YL L +G L +D ++ + + + LG+ P+ L K +G
Sbjct: 596 ----YLLCALGDGYLFTFAIDASTAQIGERKKISLGTHPMILSKFMSRG 640
>gi|325186344|emb|CCA20849.1| predicted protein putative [Albugo laibachii Nc14]
Length = 1148
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 48/286 (16%)
Query: 1 EFDAYIVVSFSNATLVLSIGET--VEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
E+D Y+V S+ N +++IG++ +EEV F TL C + ++ +QV +R
Sbjct: 412 EYDKYLVQSYLNEIRIMTIGDSDEMEEVEIEAFL-DAKTLYCRNVNEDGWLQVTETEVRI 470
Query: 59 IGAKNTT----WKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDK 114
I A+ T+ W +I + N QIV+A LIY E+
Sbjct: 471 IDAQTTSICCGWI-----PPPSTRITVASANPTQIVLATSSKVLIYMEIL---------D 516
Query: 115 KKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILD--ECSETIQMESEVLCMALSNAPSG 172
K+++ A + + IA ++ P +D + + Q+ E + A+ + +
Sbjct: 517 KQLMEKARKEMEFEIAC-------IDLSPRLDQIDPPALTRSSQVMDEAMEDAIVSRDAN 569
Query: 173 EQMSRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPA 231
+ AVG ++V ++SL D L ++ L S++ SD
Sbjct: 570 ALRTSICAVGFWTSSSVCVLSLPSLDELSKETFDK-DLLPRSVLCASFEDSD-------- 620
Query: 232 GPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL +GL +G+L+ +D+ G LS+ + LG++P+ L
Sbjct: 621 --------YLLIGLGDGSLVTCHLDREFGTLSERKRISLGTQPISL 658
>gi|380025901|ref|XP_003696702.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
[Apis florea]
Length = 1141
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 63/282 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD +V+SF T +L++ GE VEE GF T + ++ +Q+ P R I
Sbjct: 423 FDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLIS 482
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T VS+ + +K+ I A N Q++ A G L Y E + C
Sbjct: 483 YETKT-VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYLE---------------ISC 525
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
IL + T+Q EV C+ +S G ++ A
Sbjct: 526 G------------------------QILPKGFTTLQY--EVACLDISPL-DGNTEAKIAA 558
Query: 181 VGLADN-TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL + +V +++L + + K L G + S++M GN
Sbjct: 559 VGLWTHISVHILTLPALEEI-NKELLGGEIIPRSILMTCFE----------------GNT 601
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ + + +G LSD + LG++P L R
Sbjct: 602 YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFR 643
>gi|328788389|ref|XP_396048.3| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 1141
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 63/282 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
FD +V+SF T +L++ GE VEE GF T + ++ +Q+ P R I
Sbjct: 423 FDNTLVLSFVGQTRILTLNGEEVEETDIPGFVADEQTFHTGNVTNDLFIQITPTSARLIS 482
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T VS+ + +K+ I A N Q++ A G L Y E + C
Sbjct: 483 YETKT-VVSEWEPENKRTISVVACNGTQVLCA-TGNDLFYLE---------------ISC 525
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
IL + T+Q EV C+ +S G ++ A
Sbjct: 526 G------------------------QILPKGFTTLQY--EVACLDISPL-DGNTEAKIAA 558
Query: 181 VGLADN-TVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL + +V +++L + + K L G + S++M GN
Sbjct: 559 VGLWTHISVHILTLPALEEI-NKELLGGEIIPRSILMTCFE----------------GNT 601
Query: 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ + + +G LSD + LG++P L R
Sbjct: 602 YLLCALGDGSMYYFTLHKQNGILSDKKKVTLGTQPTVLRTFR 643
>gi|74212803|dbj|BAE33365.1| unnamed protein product [Mus musculus]
Length = 741
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 571 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 630
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 631 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 687
Query: 123 NQRQIVIAL 131
+ + VIAL
Sbjct: 688 HHQSKVIAL 696
>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
Length = 1108
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 119/296 (40%), Gaps = 77/296 (26%)
Query: 3 DAYIVVSFSNATLVLSIG--ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D Y+V++FS T VL + + ++E GF T TLCC+ + ++QV R +
Sbjct: 435 DTYLVLTFSGETRVLGMNAEDELDEAEIPGFNSTALTLCCANTVHDQLLQVTATAFRLVD 494
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
T V+ + +I A + Q+V A+ G L+Y E+ D + +K +
Sbjct: 495 CM-TQQLVTQWEPGADGRITIAAASPTQLVAAVGGRTLVYLEL---GDGQIEEKGR---- 546
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGE--QMSRF 178
+Q+++++ C+ ++ P GE + S
Sbjct: 547 ----------------------------------VQLDADIACLDIT--PVGELSEASEV 570
Query: 179 LAVG---LADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGP 233
+AVG L + L SLAP ++K LP + S + +
Sbjct: 571 VAVGSWALEAHIFALPSLAP--LFREK----LPTDVIPRSTLFAQFE------------- 611
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEANY 289
G+ YL GL +G L+ +D + +D + LG++P+ L R +G A +
Sbjct: 612 ---GDTYLMYGLGDGQLVNYRLD--ADGPTDRKKIALGTKPISLRTFRSRGAAAVF 662
>gi|166240328|ref|XP_637896.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
gi|238064940|sp|B0M0P5.1|DDB1_DICDI RecName: Full=DNA damage-binding protein 1; AltName: Full=DNA
repair protein E; AltName: Full=UV-damaged DNA-binding
protein 1
gi|165988543|gb|EAL64385.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
Length = 1181
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 62/285 (21%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGD-NSIVQVYPDGIRHIG 60
D Y++ SF T VLS GE +EE G TL C + N ++Q+ I I
Sbjct: 474 DRYLITSFIECTKVLSFQGEEIEETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINLID 533
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ NT +VS ++I + NQ QIV+++ L+YF+++ S K I
Sbjct: 534 S-NTFKRVSQWNVEPSRRINLVSTNQDQIVLSIDKS-LLYFQIN-------SSNKSI--- 581
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG-EQMSRFL 179
Q+V + I++ E+ C+ +S S + S+ +
Sbjct: 582 -----QLV------------------------KEIELPHEISCIDISPFDSFMDTKSQLV 612
Query: 180 AVGLA-DNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
+VGL D T+R+ L + + ++ L G L S++MI + D
Sbjct: 613 SVGLWNDITLRIFKLPTLEEIWKEPLGG-EILPRSILMISFDSID--------------- 656
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
Y++ L +G L + D +S L D R LG++P+ L K + +
Sbjct: 657 -YIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLK 700
>gi|1399512|gb|AAC47162.1| repE [Dictyostelium discoideum]
Length = 1139
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 62/285 (21%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGD-NSIVQVYPDGIRHIG 60
D Y++ SF T VLS GE +EE G TL C + N ++Q+ I I
Sbjct: 432 DRYLITSFIECTKVLSFQGEEIEETEFEGLESNCSTLYCGTIDKLNLLIQITNVSINLID 491
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ NT +VS ++I + NQ QIV+++ L+YF+++ S K I
Sbjct: 492 S-NTFKRVSQWNVEPSRRINLVSTNQDQIVLSIDKS-LLYFQIN-------SSNKSI--- 539
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG-EQMSRFL 179
Q+V + I++ E+ C+ +S S + S+ +
Sbjct: 540 -----QLV------------------------KEIELPHEISCIDISPFDSFMDTKSQLV 570
Query: 180 AVGLA-DNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
+VGL D T+R+ L + + ++ L G L S++MI + D
Sbjct: 571 SVGLWNDITLRIFKLPTLEEIWKEPLGG-EILPRSILMISFDSID--------------- 614
Query: 239 LYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
Y++ L +G L + D +S L D R LG++P+ L K + +
Sbjct: 615 -YIFCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLK 658
>gi|194474008|ref|NP_001124043.1| cleavage and polyadenylation specificity factor subunit 1 [Rattus
norvegicus]
gi|149066087|gb|EDM15960.1| cleavage and polyadenylation specific factor 1, 160kDa (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 1386
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 568 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 627
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 628 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 684
Query: 124 QRQIVIAL 131
+ VIAL
Sbjct: 685 HQSKVIAL 692
>gi|148697644|gb|EDL29591.1| cleavage and polyadenylation specific factor 1, isoform CRA_c [Mus
musculus]
Length = 1388
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 570 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 629
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 630 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 686
Query: 124 QRQIVIAL 131
+ VIAL
Sbjct: 687 HQSKVIAL 694
>gi|16751835|ref|NP_444423.1| cleavage and polyadenylation specificity factor subunit 1 isoform 2
[Mus musculus]
gi|17374611|sp|Q9EPU4.1|CPSF1_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=CPSF 160 kDa
subunit
gi|11762096|gb|AAG40326.1|AF322193_1 cleavage and polyadenylation specificity factor 1 [Mus musculus]
gi|38614159|gb|AAH56388.1| Cleavage and polyadenylation specific factor 1 [Mus musculus]
Length = 1441
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 571 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 630
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 631 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 687
Query: 123 NQRQIVIAL 131
+ + VIAL
Sbjct: 688 HHQSKVIAL 696
>gi|197245729|gb|AAI68713.1| Cpsf1 protein [Rattus norvegicus]
Length = 1439
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 569 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 628
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 629 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 685
Query: 123 NQRQIVIAL 131
+ + VIAL
Sbjct: 686 HHQSKVIAL 694
>gi|148697642|gb|EDL29589.1| cleavage and polyadenylation specific factor 1, isoform CRA_a [Mus
musculus]
Length = 1417
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 598 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 657
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 658 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 714
Query: 123 NQRQIVIAL 131
+ + VIAL
Sbjct: 715 HHQSKVIAL 723
>gi|148697643|gb|EDL29590.1| cleavage and polyadenylation specific factor 1, isoform CRA_b [Mus
musculus]
Length = 1311
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 492 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 551
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 552 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 608
Query: 123 NQRQIVIAL 131
+ + VIAL
Sbjct: 609 HHQSKVIAL 617
>gi|47217773|emb|CAG05995.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1446
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 39/208 (18%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHI-GAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN I+QV P GIR + G K
Sbjct: 538 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNKYIIQVSPMGIRLLEGVK 597
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
+ D IV C+V +VI G + F + K +S K R A+
Sbjct: 598 QLHFIPVDL----GSPIVHCSVADPYVVIMTAEGVVTMFVL-----KVDSYMGKTHRLAL 648
Query: 123 NQRQI-----VIALQGGR--------------------LIYFEMHPETGILDECSETIQM 157
+ QI VIAL R I + ET I D S +
Sbjct: 649 QKPQISTQSRVIALCAYRDVSGMFTTENKVSCAIAEDFNIRSQSETETVIHDLSSNIVDD 708
Query: 158 ESEVLCM-ALSNA-PSGEQMSR-FLAVG 182
E E+L + SNA PS E+M R F+A G
Sbjct: 709 EEEMLYGDSSSNAGPSKEEMIRSFVAPG 736
>gi|393905247|gb|EJD73911.1| CPSF A subunit region family protein [Loa loa]
Length = 1145
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 118/287 (41%), Gaps = 68/287 (23%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAM-GDNSIVQVYPDGIRH 58
EFD Y+++SF + T VL I GE +E+ +GF TL + +I+QV +
Sbjct: 421 EFDDYLILSFDSDTHVLLINGEELEDTQITGFVVDGATLWAGCLFQSTTILQVTHGEVIL 480
Query: 59 IGAKNT-TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKI 117
I N WK S K I AVN+ + G
Sbjct: 481 IDGDNIQIWKAS-------KWITLVAVNE------ITG---------------------- 505
Query: 118 VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSR 177
Q+VIA G LIY E ++ SE ++ E E+ C+ ++ + S
Sbjct: 506 --------QLVIAC-GALLIYLE--ADSAGFKLISE-LECEFEISCIDITPIGNETLRSE 553
Query: 178 FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG + +S+A L+ LP L E V+ E D S P+ G
Sbjct: 554 ICAVGYWTD----LSVA---------LRTLPQLME--VVREKIPGDMLSRSIMLSPME-G 597
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL--FKIRC 282
++YL V L +G + +D +G L D + LG++P+ L F+ RC
Sbjct: 598 HVYLLVALGDGTVHYFQIDMKTGALLDPKKATLGTQPIHLRKFRSRC 644
>gi|255918233|ref|NP_001157645.1| cleavage and polyadenylation specificity factor subunit 1 isoform 1
[Mus musculus]
Length = 1450
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 571 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 630
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 631 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 687
Query: 123 NQRQIVIAL 131
+ + VIAL
Sbjct: 688 HHQSKVIAL 696
>gi|440904368|gb|ELR54893.1| Cleavage and polyadenylation specificity factor subunit 1, partial
[Bos grunniens mutus]
Length = 1417
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 564 GFLILSREDSTMILQTGQEIMELDASGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 623
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 624 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKNDSYGGRHHRLALHKPPL 680
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 681 HHQSKVITL 689
>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
Length = 1275
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 70/286 (24%)
Query: 2 FDAYIVVSFSNATLVLSIGET--VEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
D+Y++VSF T +L+I + +EE GF ++ T+ C+ + N I QV G+ ++
Sbjct: 563 LDSYLIVSFIAETRILAINDNDELEEAVFPGFDASSQTIECANISGNVICQVTSKGV-YV 621
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
++ V+ SD+ I + ++ I +A GG L Y
Sbjct: 622 CDASSGELVASWVPSDESPITASSASENTIAVATVGGNLHY------------------- 662
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
++ QGG++ ETG + ++E+ C + G++
Sbjct: 663 ---------LSFQGGKI------SETG-------KMTFDAEISC--IDKTQCGDR--NVC 696
Query: 180 AVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
AVGL V L+ L +K + + L SL ++ D +
Sbjct: 697 AVGLWSTKVLLVELGSG--MKVCHTENL-----SLDVVPRSTLFCFFED---------TI 740
Query: 240 YLYVGLQNGALLRMVVDQTSG----DLSDNRMRYLGSRPV--KLFK 279
YL GL +G L+ VVD +S LSD + LG++PV KLFK
Sbjct: 741 YLLTGLGDGHLITNVVDSSSSAGGFALSDRKSVSLGTQPVTLKLFK 786
>gi|149512998|ref|XP_001514888.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like, partial [Ornithorhynchus anatinus]
Length = 831
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GD+ IVQV P G+R + N
Sbjct: 397 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDDRYIVQVSPLGLRLLEGVN 456
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ S IV+CAV +VI G + F + S + + + + ++
Sbjct: 457 QLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRTHRLALHKPPLH 513
Query: 124 QRQIVIALQGGRLIYFEMHPE---TGILDECSETIQMESEVLCMALSNAPSGEQ 174
+ VIAL R + E +G D+ S Q E+E L LS+ E+
Sbjct: 514 SQSKVIALCVYRDVSGMFTTESRASGPRDDPSLRGQSEAEPLLQELSHTVDDEE 567
>gi|254585271|ref|XP_002498203.1| ZYRO0G04730p [Zygosaccharomyces rouxii]
gi|238941097|emb|CAR29270.1| ZYRO0G04730p [Zygosaccharomyces rouxii]
Length = 1302
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 43/213 (20%)
Query: 77 KKIVRCAVNQ-RQIVIALQGGRLIYFEMHPVSDKKESDKK---------KIVRCAVNQRQ 126
K +V+ VN+ RQ+V +D K+ +KK ++V N Q
Sbjct: 526 KSVVQVCVNELRQVVFN--------------ADSKKYEKKLEWFPPAGIRVVAADCNYSQ 571
Query: 127 IVIALQGGRLIYFEMHPET--GILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLA 184
+ + L G + YFE+ E+ L E ++++ ++ +A+ P S +LAVG
Sbjct: 572 LAVGLSNGEICYFEIDTESLSDSLHELQNRVEIDEQIKGLAMIPEPR----SDYLAVGTK 627
Query: 185 DNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVG 244
+ ++++SL +KN D+ L ++ + A SD T ++ L++G
Sbjct: 628 EANLKVLSL-------KKN-----DMDNFLEVVSLQALMAPVSDLKITR-TERDVELHIG 674
Query: 245 LQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
L NG R +++ G L D R ++LG + V L
Sbjct: 675 LINGLYSRSKLNRYDGQLYDVRNKFLGPKEVTL 707
>gi|242010743|ref|XP_002426118.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
gi|212510165|gb|EEB13380.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
Length = 1148
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 113/283 (39%), Gaps = 64/283 (22%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
+D IV++F T +L++ GE VEE GF + C + +N+++Q+ P R I
Sbjct: 423 YDNTIVLAFVGQTRILTLNGEEVEETEIPGFLSDQQSFYCGNVENNNMIQLTPTCARLIS 482
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ T VS+ + K I A N Q + A G L Y E+ K ++V
Sbjct: 483 VE-TKQLVSEWRPPAGKTISVVACNTVQAICA-AGSDLYYLEIL---------KNELV-- 529
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
Q G +E EV C+ ++ G + + +A
Sbjct: 530 -----------QKGN-------------------TTLEYEVACLDITPLSEGGKTADIIA 559
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
VGL D + R++ L + L ++ L G + S++M N+
Sbjct: 560 VGLWTDISARILKLPDLEELNREYLGG-EIIPRSILM-----------------TCFENI 601
Query: 240 -YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
YL L +G++ ++ +G LSD + LG++P L R
Sbjct: 602 NYLLCALGDGSMFYFSLNNQNGILSDKKKVTLGTQPTVLRTFR 644
>gi|27807297|ref|NP_777145.1| cleavage and polyadenylation specificity factor subunit 1 [Bos
taurus]
gi|1706101|sp|Q10569.1|CPSF1_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=CPSF 160 kDa
subunit
gi|929007|emb|CAA58152.1| cleavage and polyadenylation specificity factor, 160 kDa subunit
[Bos taurus]
gi|296480730|tpg|DAA22845.1| TPA: cleavage and polyadenylation specificity factor subunit 1 [Bos
taurus]
Length = 1444
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 574 GFLILSREDSTMILQTGQEIMELDASGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 633
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 634 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKNDSYGGRHHRLALHKPPL 690
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 691 HHQSKVITL 699
>gi|33411762|emb|CAD58786.1| cleavage and polyadenylation specificity factor 1 [Bos taurus]
Length = 880
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 391 GFLILSREDSTMILQTGQEIMELDASGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 450
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 451 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKNDSYGGRHHRLALHKPPL 507
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 508 HHQSKVITL 516
>gi|345779232|ref|XP_532356.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Canis lupus familiaris]
Length = 1460
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 590 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 649
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 650 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 706
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 707 HHQSKVITL 715
>gi|358415280|ref|XP_003583063.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Bos taurus]
Length = 1490
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 620 GFLILSREDSTMILQTGQEIMELDASGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 679
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 680 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKNDSYGGRHHRLALHKPPL 736
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 737 HHQSKVITL 745
>gi|410987992|ref|XP_004000273.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Felis catus]
Length = 1432
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 562 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 621
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 622 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 678
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 679 HHQSKVITL 687
>gi|338728513|ref|XP_003365689.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Equus caballus]
Length = 1450
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 580 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 639
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 640 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 696
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 697 HHQSKVITL 705
>gi|338728511|ref|XP_001505047.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform 1 [Equus caballus]
Length = 1444
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 574 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 633
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 634 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 690
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 691 HHQSKVITL 699
>gi|441648592|ref|XP_004093268.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1 [Nomascus leucogenys]
Length = 1177
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 491 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 550
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 551 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYSGRHHRLALHKPPL 607
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 608 HHQSKVITL 616
>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
Length = 1033
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 64/280 (22%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV +R +
Sbjct: 358 FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHYAVYNQLVQVTSSSVRLV 417
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAV-NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ TT ++ ++ + + A N Q+++A GG L+Y E
Sbjct: 418 SS--TTRELQNEWHAPAGYSINVATANATQVLLATGGGHLVYLE---------------- 459
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ G L + ++ Q+E E+ C+ ++ S+
Sbjct: 460 ------------IGDGTLTH-------------TKHAQLECEISCLDINPIGENPNYSQL 494
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR+ SL + + +++L G + S+++ G
Sbjct: 495 AAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCSFE----------------G 537
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
YL L +G LL +++ +G+L+D + LG++P+ L
Sbjct: 538 ISYLLCALGDGHLLNFLLNLNTGELTDRKKVSLGTQPITL 577
>gi|281208174|gb|EFA82352.1| UV-damaged DNA binding protein1 [Polysphondylium pallidum PN500]
Length = 1054
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 65/276 (23%)
Query: 5 YIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCC-SAMGDNSIVQVYPDGIRHIGAK 62
+++VSF N+T VL+ GE +EE +GF TL C + +N +Q+ GI + +
Sbjct: 380 HLIVSFINSTKVLTFSGEEIEETEIAGFDSNATTLYCGNTTENNHFIQIATSGIYLVDS- 438
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
++ D+ +K I + N QI+I+ QG L Y E+ SD K I++
Sbjct: 439 -SSLMRLDQYTPEKGSINLASCNGSQILIS-QGSNLTYLEI--------SDSKLIIK--- 485
Query: 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182
+ Q++ E+ C+ +S G S AVG
Sbjct: 486 ------------------------------KEAQLQYEISCLDIS-LLDGFTSSPVCAVG 514
Query: 183 L-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
L D +VR++ L + + ++ L G L S++ I ++ YL
Sbjct: 515 LWTDISVRILQLPNLNEVCKETLGG-EILPRSILFITFEGTN----------------YL 557
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
L +G L D L + + LG+ P+ L
Sbjct: 558 LCSLGDGHLFNFTFDVVENLLQERKKLSLGTTPILL 593
>gi|417406474|gb|JAA49895.1| Putative mrna cleavage and polyadenylation factor ii complex
subunit cft1 cpsf subunit [Desmodus rotundus]
Length = 1444
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 574 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 633
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 634 NQLHFIPVDLGS---PIVQCAVADPCVVIMSAEGHVAMFLLKSDSYGGRHHRLALHKPPL 690
Query: 123 NQRQIVIAL 131
+ + VIA+
Sbjct: 691 HHQSKVIAM 699
>gi|395860104|ref|XP_003802355.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Otolemur garnettii]
Length = 1441
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 571 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 630
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 631 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYSGRHHRLALHKPPL 687
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 688 HHQSKVITL 696
>gi|296227035|ref|XP_002807684.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1 [Callithrix jacchus]
Length = 1394
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 524 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 583
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N V + IV+CAV +VI G + F + S + + + +
Sbjct: 584 NQLHFVPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 640
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 641 HHQSKVITL 649
>gi|195037449|ref|XP_001990173.1| GH18378 [Drosophila grimshawi]
gi|193894369|gb|EDV93235.1| GH18378 [Drosophila grimshawi]
Length = 1140
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 118/284 (41%), Gaps = 66/284 (23%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
++ +V++F T +L++ GE VEE GF + C+ + + ++QV + +R +
Sbjct: 420 YENTLVLAFVGHTRILTLSGEEVEETDIPGFASDLQSFLCANVDYDQLIQVTAESVRLVK 479
Query: 61 AKNTTWKVSDKKESDKK-KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVR 119
+ K E D+ +V C N QIV A R I++
Sbjct: 480 SATKALVGEWKPEGDRSIGVVSC--NTTQIVAA--SAREIFY------------------ 517
Query: 120 CAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFL 179
I+++ G L+ ++C + + E V C+ ++ + S +
Sbjct: 518 ---------ISIEDGSLV-----------EKCRKILPYE--VACLDVTPLDEKQNKSDLV 555
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D + ++SL + + + L G + S++M T +
Sbjct: 556 AVGLWTDISAVILSLPDLETIYTEKLSG-EIIPRSILM-----------------TTFED 597
Query: 239 L-YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
+ YL L +G++ ++D+T+G L++ + LG++P L R
Sbjct: 598 IHYLLCALGDGSMYYFILDKTTGQLTEKKKVTLGTQPTTLRTFR 641
>gi|449435512|ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
Length = 1093
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 68/284 (23%)
Query: 2 FDAYIVVSFSNAT--LVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
FD ++VVSF + T L +++ + +EE GF TL C N +VQV +R +
Sbjct: 413 FDTFLVVSFISETRILAMNLEDELEETEIEGFNSQVQTLFCHDALFNQLVQVTSSSVRLV 472
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAV-NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
+ TT ++ ++ + + A N Q+++A GG L++ E+
Sbjct: 473 SS--TTRELLNEWNAPSNYSINVATANASQVLLATGGGVLVHLEI--------------- 515
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
C G+L E + IQ+E E+ C+ ++ S+
Sbjct: 516 -C------------------------DGLLVE-KKHIQLEHEISCLDINPIGDNPNCSQL 549
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AVG+ D +VR+ SL + L ++ L G L+ G S
Sbjct: 550 AAVGMWTDISVRIFSLPDLNLLTKEQLGGEIIPRSVLLCTFEGIS--------------- 594
Query: 238 NLYLYVGLQNGALLRMVVDQTSG----DLSDNRMRYLGSRPVKL 277
YL L +G LL +++ S +L D + LG++P+ L
Sbjct: 595 --YLLCALGDGHLLNFILNTNSNSNSCELMDRKKVSLGTQPITL 636
>gi|229335612|ref|NP_001108153.2| cleavage and polyadenylation specificity factor subunit 1 [Danio
rerio]
Length = 1449
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN I+QV P GIR +
Sbjct: 574 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDNKYIIQVSPMGIRLLEGV 633
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV C+V +VI G + F + K +S K R A+
Sbjct: 634 NQLHFIPVDLGS---PIVHCSVADPYVVIMTAEGVVTMFVL-----KNDSYMGKSHRLAL 685
Query: 123 NQRQI 127
+ QI
Sbjct: 686 QKPQI 690
>gi|402879380|ref|XP_003903320.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1 [Papio anubis]
Length = 1389
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 519 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 578
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 579 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 635
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 636 HHQSKVITL 644
>gi|348555856|ref|XP_003463739.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform 2 [Cavia porcellus]
Length = 1387
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 568 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 627
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 628 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 684
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 685 HHQSKVITL 693
>gi|348555854|ref|XP_003463738.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 isoform 1 [Cavia porcellus]
Length = 1440
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 570 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 629
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 630 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 686
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 687 HHQSKVITL 695
>gi|49619065|gb|AAT68117.1| cleavage and polyadenylation specific factor 1 [Danio rerio]
Length = 1105
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN I+QV P GIR +
Sbjct: 230 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDNKYIIQVSPMGIRLLEGV 289
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV C+V +VI G + F + K +S K R A+
Sbjct: 290 NQLHFIPVDLGS---PIVHCSVADPYVVIMTAEGVVTMFVL-----KNDSYMGKSHRLAL 341
Query: 123 NQRQI 127
+ QI
Sbjct: 342 QKPQI 346
>gi|410042329|ref|XP_003954555.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1 [Pan troglodytes]
Length = 1296
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 573 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 632
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 633 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 689
Query: 124 QRQIVIAL 131
+ VI L
Sbjct: 690 HQSKVITL 697
>gi|119602512|gb|EAW82106.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
CRA_a [Homo sapiens]
gi|119602513|gb|EAW82107.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
CRA_a [Homo sapiens]
gi|119602514|gb|EAW82108.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
CRA_a [Homo sapiens]
Length = 1365
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 496 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 555
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 556 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 612
Query: 124 QRQIVIAL 131
+ VI L
Sbjct: 613 HQSKVITL 620
>gi|395740218|ref|XP_002819588.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Pongo abelii]
Length = 1388
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 520 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 579
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 580 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 636
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 637 HHQSKVITL 645
>gi|426361048|ref|XP_004047737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Gorilla gorilla gorilla]
Length = 1440
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 570 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 629
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 630 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 686
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 687 HHQSKVITL 695
>gi|1045574|gb|AAC50293.1| cleavage and polyadenylation specificity factor [Homo sapiens]
Length = 1442
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 574 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 633
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 634 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 690
Query: 124 QRQIVIAL 131
+ VI L
Sbjct: 691 HQSKVITL 698
>gi|397497327|ref|XP_003819464.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Pan paniscus]
gi|410336497|gb|JAA37195.1| cleavage and polyadenylation specific factor 1, 160kDa [Pan
troglodytes]
Length = 1442
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 573 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 632
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 633 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 689
Query: 124 QRQIVIAL 131
+ VI L
Sbjct: 690 HQSKVITL 697
>gi|392306997|ref|NP_001254722.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
mulatta]
gi|380812168|gb|AFE77959.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
mulatta]
gi|383417835|gb|AFH32131.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
mulatta]
Length = 1442
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 573 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 632
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 633 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 689
Query: 124 QRQIVIAL 131
+ VI L
Sbjct: 690 HQSKVITL 697
>gi|56676371|ref|NP_037423.2| cleavage and polyadenylation specificity factor subunit 1 [Homo
sapiens]
gi|23503048|sp|Q10570.2|CPSF1_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=CPSF 160 kDa
subunit
gi|16878041|gb|AAH17232.1| Cleavage and polyadenylation specific factor 1, 160kDa [Homo
sapiens]
gi|119602516|gb|EAW82110.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform
CRA_c [Homo sapiens]
gi|123993607|gb|ABM84405.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
construct]
gi|123999626|gb|ABM87355.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
construct]
gi|307684758|dbj|BAJ20419.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
construct]
Length = 1443
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 574 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 633
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 634 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 690
Query: 124 QRQIVIAL 131
+ VI L
Sbjct: 691 HQSKVITL 698
>gi|50292811|ref|XP_448838.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608786|sp|Q6FLQ6.1|RSE1_CANGA RecName: Full=Pre-mRNA-splicing factor RSE1
gi|49528151|emb|CAG61808.1| unnamed protein product [Candida glabrata]
Length = 1296
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 56/243 (23%)
Query: 37 TLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGG 96
T+ + MGDNSI+QV D R I + D K+ + K+
Sbjct: 503 TIHVATMGDNSIIQVCKDEFRQI--------LLDSKDEENFKM----------------- 537
Query: 97 RLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ 156
L ++ VS I+ N Q+++AL ++Y ++ E L E +
Sbjct: 538 NLKWYPPAGVS---------ILSAVSNFSQLILALSNNEIVYLQL--ENNTLIEYKNRPE 586
Query: 157 MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD---CLKQKNLQGLPDLAES 213
+ + +AL N + S LAVG +DN V ++SL D + Q L + S
Sbjct: 587 LPDVITSLALLN--DNTKKSEILAVGTSDNMVNVLSLEIVDEAISFETVVFQALDAIPSS 644
Query: 214 LVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSR 273
L+++ G L N L++G+++G+ L +D + +++ + LG+R
Sbjct: 645 LLILNQGHK-------------LVN--LHIGVEDGSYLVNRLDLRNMSINNILRKQLGTR 689
Query: 274 PVK 276
+K
Sbjct: 690 SIK 692
>gi|384946686|gb|AFI36948.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
mulatta]
Length = 1428
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 573 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 632
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 633 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 689
Query: 124 QRQIVIAL 131
+ VI L
Sbjct: 690 HQSKVITL 697
>gi|330792580|ref|XP_003284366.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
gi|325085712|gb|EGC39114.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
Length = 1064
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 64/286 (22%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMG-DNSIVQVYPDGIRHIG 60
D Y++VSF T VL GE +EE G + T+ CS + +N IVQV I I
Sbjct: 375 DQYLIVSFIGYTKVLQFQGEEIEETEFEGLDSNSSTILCSNIDKENVIVQVTNQAINLIN 434
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
T +V K I + NQ Q IAL G+ +Y
Sbjct: 435 PI-TFKRVDQWKSPSGSPINLVSSNQSQ--IALSIGKSLY-------------------- 471
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSG-EQMSRFL 179
YFE++ ++ I E + I++ E+ C+ +S S + S+
Sbjct: 472 -----------------YFEINEQSRI--ELIKEIELPHEISCIDISPLDSFMDSRSQIC 512
Query: 180 AVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238
AVGL D T+RL L + + ++ L G + S++MI D
Sbjct: 513 AVGLWTDITLRLFKLPTLEEIHKEPLGG-EIIPRSILMISFEGID--------------- 556
Query: 239 LYLYVGLQNGALLRMVVD-QTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
Y++ L +G L + +D + L D R LG++P+ L K + +
Sbjct: 557 -YIFCSLGDGHLFKFKIDIANNWKLFDKRKLTLGTQPIILKKFKLK 601
>gi|325189779|emb|CCA24259.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1911
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEV-SGSGFYGTTPTLCCSAM-GDNSIVQVYPDGIRHI 59
+D+Y+++S + T++L GE +E + SGFY PTLC + + IVQV+ G+R +
Sbjct: 807 YDSYLILSVAQRTMILRTGEEMEPLEDDSGFYTCGPTLCATNLFSQRRIVQVFKQGVRVM 866
Query: 60 GAKNTTWKVSDKKESDK 76
+ + S+ KE D+
Sbjct: 867 --QQASIPASEAKEDDE 881
>gi|410911304|ref|XP_003969130.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Takifugu rubripes]
Length = 1444
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 36/201 (17%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHI-GA 61
++++S ++T++L G+ + E+ SGF PT+ +GDN I+QV P GIR + G
Sbjct: 572 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNKYIIQVSPMGIRLLEGV 631
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ D IV C++ +VI G + F + K +S K R A
Sbjct: 632 TQLHFIPVDL----GSPIVHCSLADPYVVIMTAEGVVTMFVL-----KIDSYMGKTHRLA 682
Query: 122 VNQRQI-----VIALQGGR--------------------LIYFEMHPETGILDECSETIQ 156
+ + QI VIAL R I + ET I D + +
Sbjct: 683 LQKPQISTQSRVIALCAYRDVSGMFTTENKVSCSITEDISIRSQSEAETIIQDLSTNIVD 742
Query: 157 MESEVLCMALSNAPSGEQMSR 177
E E+L + PS E+M+R
Sbjct: 743 DEEEMLYGDSNTGPSKEEMNR 763
>gi|325187036|emb|CCA21579.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1912
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEV-SGSGFYGTTPTLCCSAM-GDNSIVQVYPDGIRHI 59
+D+Y+++S + T++L GE +E + SGFY PTLC + + IVQV+ G+R +
Sbjct: 808 YDSYLILSVAQRTMILRTGEEMEPLEDDSGFYTCGPTLCATNLFSQRRIVQVFKQGVRVM 867
Query: 60 GAKNTTWKVSDKKESDK 76
+ + S+ KE D+
Sbjct: 868 --QQASIPASEAKEDDE 882
>gi|291232722|ref|XP_002736302.1| PREDICTED: cleavage and polyadenylation specific factor 1-like
[Saccoglossus kowalevskii]
Length = 984
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
A++++S +++++LS G+ + E+ SGF PT+ +G+N+ I+QV P G+R +
Sbjct: 202 AFLILSRDDSSMILSTGQEIMELDHSGFSTQGPTVYAGNLGNNAYILQVSPMGVRLLEGV 261
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHP 105
N + S IV C+V+ ++ + G L+ + P
Sbjct: 262 NQLQHIPLDLGS---PIVLCSVSDPYALLMSEKGELVLLTLKP 301
>gi|432883539|ref|XP_004074300.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Oryzias latipes]
Length = 1456
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHI-GA 61
++++S ++T++L G+ + E+ SGF PT+ +GDN I+QV P G+R + G
Sbjct: 582 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNQYIIQVSPMGLRLLEGV 641
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
K + D IV C+V +VI G + F + K ++ K R A
Sbjct: 642 KQLHFIPVDL----GSPIVHCSVADPYVVIMTAEGVVTMFVL-----KSDTYMGKTHRLA 692
Query: 122 VNQRQI-----VIALQGGR 135
+ + QI VIAL R
Sbjct: 693 LQKPQISTLSRVIALCAYR 711
>gi|444523674|gb|ELV13604.1| Cleavage and polyadenylation specificity factor subunit 1 [Tupaia
chinensis]
Length = 1469
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 600 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 659
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYF 101
+ + IV+CAV +VI G + F
Sbjct: 660 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMF 694
>gi|298711490|emb|CBJ26578.1| n/a [Ectocarpus siliculosus]
Length = 1135
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 124/316 (39%), Gaps = 99/316 (31%)
Query: 3 DAYIVVSFSNATLVLSIGETVE--------EVSGSGFYGTTPTLCCSAMGDNSIVQVYPD 54
D Y+V +F + T VL+ E + E++G + TL C +G N VQV
Sbjct: 414 DKYLVQAFISETRVLAFEEDEDGDHQLAEGEIAG---FQEGCTLFCGCVGGNMAVQVTKR 470
Query: 55 GIRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDK 114
G+ I ++ I + N ++V+AL GG L++ E+ ++
Sbjct: 471 GVVLICCDGLQ-EIDRWDPPTDLNITVASGNATRVVLALGGGNLVHLEV-------DATA 522
Query: 115 KKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQ 174
KK+V+ A +Q+++E+ C++L N PS +
Sbjct: 523 KKLVQKA--------------------------------RVQLDNEIACISL-NPPSNQP 549
Query: 175 MSR------------------FLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLV 215
+S +AVG+ D TVRL+SL +LQG+
Sbjct: 550 VSNAEPATTAMECDEESKLDSLVAVGMWTDMTVRLLSL--------PDLQGV-------- 593
Query: 216 MIEMGASDPTSSDEPAGPVTLGNL----YLYVGLQNGALLRM---VVDQTSGDLSDNRMR 268
+S P D A V L + YL+VGL +G ++ V +++ L +
Sbjct: 594 -----SSQPLGGDTQARSVILATIADVHYLFVGLGDGHVVSFPLEVTAESTLALGTPKKV 648
Query: 269 YLGSRPVKLFKIRCQG 284
LG++PV L R G
Sbjct: 649 ALGTQPVGLACFRNNG 664
>gi|351713968|gb|EHB16887.1| Cleavage and polyadenylation specificity factor subunit 1
[Heterocephalus glaber]
Length = 1440
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR +
Sbjct: 571 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGV 630
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 631 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKNDSYGGRHHRLALHKPPL 687
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 688 HHQSKVITL 696
>gi|321475208|gb|EFX86171.1| hypothetical protein DAPPUDRAFT_313209 [Daphnia pulex]
Length = 1260
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
Y+++S +++T+VL G+ + E+ SGF T+PT+ + +G+N IVQV P +R + A
Sbjct: 534 TYLLLSRADSTMVLQTGQEINEMDQSGFSVTSPTILAANLGNNRFIVQVCPTSVRLLDAT 593
Query: 63 NT 64
T
Sbjct: 594 AT 595
>gi|301773406|ref|XP_002922132.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 1-like [Ailuropoda
melanoleuca]
Length = 1469
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GD+ IVQV P GIR +
Sbjct: 609 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDSRYIVQVSPLGIRLLEGV 668
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + S IV+CAV +VI G + F + S + + + +
Sbjct: 669 NQLHFIPVDLGS---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 725
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 726 HHQSKVITL 734
>gi|193644722|ref|XP_001942922.1| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
Length = 1156
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 71/287 (24%)
Query: 2 FDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D +V+SF + VL+ GE VEE+ GF T C DN +VQ+ +R I
Sbjct: 423 LDDTLVLSFVGHSRVLAYSGEEVEEIDLEGFQSELQTFYCGNTSDNKMVQITSASVRLIC 482
Query: 61 AKN----TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKK 116
++ + W V D K + +V C N Q V A G L Y E+ +DK
Sbjct: 483 LESKCLVSEWNVPDGKSIN---VVSC--NGHQAVCA-TGNSLYYIEI-------GTDK-- 527
Query: 117 IVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMS 176
V+Q+ + + E LD CS ++E + S
Sbjct: 528 -----VDQKG-----------FITLEHEVSCLDVCS----FKNEFY-----------KNS 556
Query: 177 RFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235
+AVGL D +V+++ LPD E LV +G S VT
Sbjct: 557 SLVAVGLWMDISVKILQ--------------LPDFVE-LVREPLGEEIIPRS---ILMVT 598
Query: 236 LGNL-YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIR 281
N+ YL L +G+L ++ +G LSD R LG++P + K +
Sbjct: 599 FENIDYLLCALGDGSLCYFHLNPENGVLSDKRKVNLGTQPTLIRKFQ 645
>gi|348512553|ref|XP_003443807.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Oreochromis niloticus]
Length = 1456
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHI-GAK 62
++++S ++T++L G+ + E+ SGF PT+ +GDN I+QV P G+R + G +
Sbjct: 584 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDNKYIIQVSPMGLRLLEGVR 643
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
+ D IV C+V +VI G + F + K +S K R A+
Sbjct: 644 QLHFIPVDL----GSPIVHCSVADPYVVIMTAEGVVTMFVL-----KSDSYMGKTHRLAL 694
Query: 123 NQRQI-----VIALQGGRLIYFEMHPETGILDECS---ETI--QMESEVLCMALSNAPSG 172
+ QI VI L R + E + CS +TI Q E+E + +SN
Sbjct: 695 QKPQIPSQSRVITLCAYRDVSGMFTTENKV--SCSIKEDTIRSQSEAETIIHDMSNTVDD 752
Query: 173 EQ 174
E+
Sbjct: 753 EE 754
>gi|159155577|gb|AAI54419.1| Cpsf1 protein [Danio rerio]
Length = 400
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN I+QV P GIR + N
Sbjct: 185 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVYAGNIGDNKYIIQVSPMGIRLLEGVN 244
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ S IV C+V +VI G + F + K +S K R A+
Sbjct: 245 QLHFIPVDLGS---PIVHCSVADPYVVIMTAEGVVTMFVL-----KNDSYMGKSHRLALQ 296
Query: 124 QRQI 127
+ QI
Sbjct: 297 KPQI 300
>gi|324502823|gb|ADY41238.1| DNA damage-binding protein 1, partial [Ascaris suum]
Length = 1129
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 69/287 (24%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI 59
E D Y+VV F + T +L I GE +E+ GF T TL +G I Q+ P + I
Sbjct: 413 ELDDYLVVGFVDETHILKISGEELEDTQLPGFSTTEQTLWAGRVGSGGIAQITPLKVVLI 472
Query: 60 GAKNT-TWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
NT TW+ +I +VN+ + L G +++ + ++DK
Sbjct: 473 LRGNTLTWE-------PPSRISVVSVNELSGQVVLACGNQLHYLL--LTDK--------- 514
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+ P T I EC E E+ C+ + E S+
Sbjct: 515 ----------------------ITPITNI--EC------EFEIACIDV-GCVGDEIESKL 543
Query: 179 LAVG-LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
AV D +V L SL + + ++ G LA SL++ M G
Sbjct: 544 CAVAYWTDMSVALRSLPDLNEIVREKCGG-EMLARSLLICMME----------------G 586
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
+YL V L +G L +D SG L+ + LG++P L K +G
Sbjct: 587 IVYLLVALGDGTLYYYQIDMNSGALTQPKKATLGTQPTTLKKFMSRG 633
>gi|403302917|ref|XP_003942095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Saimiri boliviensis boliviensis]
Length = 1390
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
++++S ++T++L G+ + E+ SGF PT+ +GD+ IVQV P GIR +
Sbjct: 520 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNVGDDRYIVQVSPLGIRLLEGV 579
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
N + + IV+CAV +VI G + F + S + + + +
Sbjct: 580 NQLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPL 636
Query: 123 NQRQIVIAL 131
+ + VI L
Sbjct: 637 HHQSKVITL 645
>gi|328773280|gb|EGF83317.1| hypothetical protein BATDEDRAFT_21894 [Batrachochytrium
dendrobatidis JAM81]
Length = 1673
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIG 60
F Y+++S S+ T +L GE E+ + FY PT+ A+ D + IVQV+P+G+
Sbjct: 654 FHKYVILSHSSGTSILKAGEAFTEMDDTTFYQAGPTVGVGALLDETIIVQVHPNGVILFD 713
Query: 61 AKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC 120
+ + D+ +++ + I ++G +L EM V D D ++ C
Sbjct: 714 FSKYDFTIIDRLNTNR---------MHALYIFVEGTKLQ--EMR-VGD----DDIWVISC 757
Query: 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSE 153
+ ++ + G ++ + T + + SE
Sbjct: 758 SFMDPYAMLLMNTGHIVLLSLDETTHQITQISE 790
>gi|303271531|ref|XP_003055127.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463101|gb|EEH60379.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1223
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 3 DAYIVVSFSNATLVLSIGET--VEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHI- 59
D ++VV+F T +L+I + ++E GF G L C+ + QV GIR +
Sbjct: 475 DTFLVVAFIGETRILAINDKDELDETEFEGFAGDERALACANVDGGYACQVTSGGIRLVD 534
Query: 60 ---GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLI 99
GA W +++ A N+ Q+V+AL+GG L+
Sbjct: 535 VATGALRARWT-----PEPGERVSVAAANRTQVVVALEGGTLV 572
>gi|154419018|ref|XP_001582526.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
gi|121916762|gb|EAY21540.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
Length = 1142
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 29/236 (12%)
Query: 65 TWKVSDKKES----DKKKI---VRCAVNQRQIV--IALQGGRLIY-FEMHPVSDKKESDK 114
T ++ D KES DKK I A N + I +G R+I E H D K +
Sbjct: 483 TRELKDSKESLFVTDKKTIDVFFLPAFNNTSSLAQITTEGMRIINDKEKH---DWKRDES 539
Query: 115 KKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQME--SEVLCMALSNAPSG 172
KI+ N QI I +++ FE ET + E S ME ++ +AL +G
Sbjct: 540 SKIICVTANPSQIAIVYDDNQIVLFETD-ETSLPKEVSSNKVMEIAGQITSIALPQPQTG 598
Query: 173 EQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAG 232
+ +LAV ++ + ++ + + + + V+ M P
Sbjct: 599 VRYVEWLAVSAVNDGLSIVYIVNISKTTEMWSVSSRQILDKTVISMMFLFVPG------- 651
Query: 233 PVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEAN 288
+GN+ L++G G L R +D ++G L + +++LG+ PV RC+ N
Sbjct: 652 ---IGNI-LHIGHNEGLLTRTNLDDSNGSLDNATLKFLGNAPVTF--SRCEVKNQN 701
>gi|414883930|tpg|DAA59944.1| TPA: hypothetical protein ZEAMMB73_987949 [Zea mays]
Length = 1355
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 32/262 (12%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIRHI- 59
+ +++V+SF T +LS+G + ++S + GF TL C + DN +VQ+Y G++
Sbjct: 546 YHSFLVLSFVEETRILSVGLSFNDISDAVGFQPDVCTLACGLVADNLLVQIYSKGVKVCL 605
Query: 60 --------GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKE 111
GA T+ +D + I AV +V+A +Y V +
Sbjct: 606 PTVYAHPEGAPLTSPICTDWYPA--ITISVGAVGHNIVVVATSNPCCLY-----VLGVRS 658
Query: 112 SDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPS 171
S + A + Q+ + + E I D S + E + +C N P
Sbjct: 659 SSSYQYELYATHHVQLQYEVSC-----ISIPQEDCIHDNVSFSCG-EGDDIC---KNPPP 709
Query: 172 GEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPA 231
+ +F +G +V +ISL P + L+ + + V +GA E
Sbjct: 710 KVNVCKFAVIGTHRPSVEIISLEPGEALRVLTIGTVS------VNNALGAPMSGCIPENV 763
Query: 232 GPVTLGNLYLYVGLQNGALLRM 253
V Y+ GL+NG LLR
Sbjct: 764 RFVAAERFYILAGLRNGMLLRF 785
>gi|344236599|gb|EGV92702.1| Cleavage and polyadenylation specificity factor subunit 1
[Cricetulus griseus]
Length = 1419
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 577 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 636
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVI 91
+ + IV+CAV +VI
Sbjct: 637 QLHFIPVDLGA---PIVQCAVADPYVVI 661
>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
occidentalis]
Length = 1154
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 26/170 (15%)
Query: 117 IVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMS 176
I +CA N Q+ +AL+ L+Y E+ G L E T ++E E+ CM L+ +
Sbjct: 499 ITQCACNDVQVALALKN-VLVYLEIR--DGSLTEIKRT-RLEYEIACMDLNTLDKEGDQT 554
Query: 177 RFLAVGLADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEM-GASDPTSSDEPAGP 233
+ VGL + L+ P L+Q Q LP + S++ I G++D
Sbjct: 555 SIITVGLWTDVSILVLSLPD--LEQLFRQELPKDVIPRSVLKITFEGSTD---------- 602
Query: 234 VTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283
YL L +G+L + T G+L+ + LG++P L K R Q
Sbjct: 603 ------YLLCTLADGSLFYYHLAST-GELTGQKRVTLGTQPTTLRKFRSQ 645
>gi|355680843|gb|AER96659.1| cleavage and polyadenylation specific factor 1, 160kDa [Mustela
putorius furo]
Length = 1399
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHI-GA 61
++++S ++T++L G+ + E+ SGF PT+ +GD IVQV P GIR + G
Sbjct: 530 GFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDGRYIVQVSPLGIRLLEGV 589
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA 121
+ D IV+CAV +VI G + F + S + + +
Sbjct: 590 SQLHFIPVDL----GSPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPP 645
Query: 122 VNQRQIVIAL 131
++ + VI L
Sbjct: 646 LHHQSKVITL 655
>gi|393212467|gb|EJC97967.1| hypothetical protein FOMMEDRAFT_162310 [Fomitiporia mediterranea
MF3/22]
Length = 1161
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 29/180 (16%)
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQME--------SEVLCMALS 167
KIV ++ QI +A+ GG ++ + D+ +E + + SE+ +++S
Sbjct: 542 KIVLADISPSQICVAISGGTVVLLNL-----FADKINEQSRKQFYSPDGSSSEISALSIS 596
Query: 168 NAPSGEQMSRFLAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTS 226
G S F+A+G + + V+++ L + + + +P L SL++ +
Sbjct: 597 PMKRGANFSSFVALGFWSSHEVKVLRLPTFEQIDAVPVV-MPHLPRSLLLCDF------- 648
Query: 227 SDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNE 286
S+E + P + YL VGL NG ++ M + G L + + LG PV L RC+ N+
Sbjct: 649 SEEESKP----HRYLMVGLANGTVVSMPFAE-KGVLGEKKFFGLGGAPVSL--SRCEVND 701
>gi|389614684|dbj|BAM20371.1| spliceosomal protein sap, partial [Papilio polytes]
Length = 541
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 19/24 (79%)
Query: 264 DNRMRYLGSRPVKLFKIRCQGNEA 287
D R RYLGSRPVKLFK+R G EA
Sbjct: 1 DTRTRYLGSRPVKLFKVRVHGAEA 24
>gi|384487281|gb|EIE79461.1| hypothetical protein RO3G_04166 [Rhizopus delemar RA 99-880]
Length = 1468
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHI 59
+FD + +S S +TLVLS G+ ++EV +GFY T+ S + D + IVQVY G+ +
Sbjct: 558 DFDKLLFISKSKSTLVLSAGDELQEVK-TGFYTRGSTIAVSTLFDATRIVQVYATGVMVL 616
Query: 60 GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLI 99
+ ++ KIV +++ I++ L +++
Sbjct: 617 TPEGK--RIQTVPIPRGAKIVEASIHDPYILLTLDNNKIL 654
>gi|301628217|ref|XP_002943254.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1 [Xenopus (Silurana) tropicalis]
Length = 628
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR
Sbjct: 568 GFLILSRDDSTMILQTGQEIMELDTSGFATQDPTVYAGNIGDNKYIVQVSPRGIR 622
>gi|302814354|ref|XP_002988861.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
gi|300143432|gb|EFJ10123.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
Length = 1413
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAM-GDNSIVQVYPDGIRH 58
E+ AY+++S + T+VL GET+ EV+ S +Y P++ + G I QVY G+R
Sbjct: 592 EYHAYLIISLESRTMVLETGETLGEVTDSVEYYTEGPSISAGNLFGRRRIAQVYQKGVRI 651
Query: 59 I-GAKNT 64
+ GA+ T
Sbjct: 652 LDGARQT 658
>gi|302761560|ref|XP_002964202.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
gi|300167931|gb|EFJ34535.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
Length = 1413
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAM-GDNSIVQVYPDGIRH 58
E+ AY+++S + T+VL GET+ EV+ S +Y P++ + G I QVY G+R
Sbjct: 592 EYHAYLIISLESRTMVLETGETLGEVTDSVEYYTEGPSISAGNLFGRRRIAQVYQKGVRI 651
Query: 59 I-GAKNT 64
+ GA+ T
Sbjct: 652 LDGARQT 658
>gi|366995619|ref|XP_003677573.1| hypothetical protein NCAS_0G03340 [Naumovozyma castellii CBS 4309]
gi|342303442|emb|CCC71221.1| hypothetical protein NCAS_0G03340 [Naumovozyma castellii CBS 4309]
Length = 1280
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 115/281 (40%), Gaps = 57/281 (20%)
Query: 4 AYIVVSFSNATLVLSI-GETVEEVS---GSGFYGTTP-TLCCSAMGDNSIVQVYPDGIRH 58
+ + +SF N+T++L I +++E+++ S F T+ + MG NSIVQ+ + +R
Sbjct: 458 SLMFLSFINSTMILQITNDSMEQLTLPYKSPFIEKDEMTIYVNKMGSNSIVQICTNTLRQ 517
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
I +T ++K L +F + I
Sbjct: 518 IHI-DTNQTFTEK--------------------------LNWFPPAGI---------HIT 541
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESE--VLCMALSNAPSGEQMS 176
N Q++++L ++YF+M ++ E ++ + + ++L + S S
Sbjct: 542 NAQCNDTQLILSLSNNEIVYFQMDQSDSLM-EYQRRLEFNDDEPITSISLIESSSSTTFS 600
Query: 177 RFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTL 236
+A+G + ++++SL D PD +V ++ S + T+
Sbjct: 601 NIMAIGTKGSLIKIVSLNSND----------PDTFLEVVSLQTTLSAVNQLKLVSNNKTI 650
Query: 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
L+VGL NG + V+ G + D R +YLG P+ L
Sbjct: 651 K---LHVGLDNGVYMNSNVNVKDGTIFDVRTKYLGPNPITL 688
>gi|170589357|ref|XP_001899440.1| CPSF A subunit region family protein [Brugia malayi]
gi|158593653|gb|EDP32248.1| CPSF A subunit region family protein [Brugia malayi]
Length = 655
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 123 NQRQIVIALQGGRLIYFEMHPE-TGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAV 181
N Q+V+A G LIY E + ++ E I+ E E+ C+ ++ G S AV
Sbjct: 3 NLGQLVVAC-GALLIYLEANSAGFKVITE----IECEFEISCIDITPIGKGTLRSEICAV 57
Query: 182 GLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYL 241
G + +S+A L+ LP L E V+ E D S P+ G++YL
Sbjct: 58 GYWTD----LSVA---------LRALPQLVE--VVREKIVGDMLSRSIMLSPME-GHVYL 101
Query: 242 YVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL--FKIRC 282
V L +G + +D +G L D + LG++P+ L F+ RC
Sbjct: 102 LVALGDGTVHYFQIDMKTGALLDPKKATLGTQPIHLRKFRSRC 144
>gi|451856466|gb|EMD69757.1| hypothetical protein COCSADRAFT_32431 [Cochliobolus sativus ND90Pr]
Length = 1116
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 32/191 (16%)
Query: 85 NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPE 144
N R + L GG +I E P +D K I +VN+ ++++L G ++ M
Sbjct: 488 NGRARICDLDGG-MITSEWVP------TDGKTITAASVNETHVLVSLGGVTIVSLSMANG 540
Query: 145 TGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNL 204
++ E +T ES+V C+ L PSG + F VG +N+ +++ D L+
Sbjct: 541 LQVVKE--KTFGAESQVACVTL---PSGTSSTCF--VGFWNNS--QLAICSLDTLEAVKT 591
Query: 205 QGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDL 262
+ D + SL++ ++ P S L+V L +G ++ DQ++ +L
Sbjct: 592 VQISDDSVPRSLLLTQIFPDQPPS--------------LFVALADGNVVTYTFDQSNHEL 637
Query: 263 SDNRMRYLGSR 273
S + LG+R
Sbjct: 638 SGRKSIVLGTR 648
>gi|303285993|ref|XP_003062286.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455803|gb|EEH53105.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1469
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCC-SAMGDNSIVQVYPDGIR-- 57
+ AY+V+S +++T++L GE ++EVS TLC +A G IVQVY G+R
Sbjct: 616 YHAYLVISLASSTMILETGEELKEVSEHVELVTDAATLCAGNAFGRERIVQVYDKGVRVA 675
Query: 58 ----HIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESD 113
+ +T V+D + + +IV ++ ++ L G L K + +
Sbjct: 676 AGPVKVQDIASTELVADAGDGEGIEIVAAEISFPYVLCRLSDGSLAVL-------KGDEE 728
Query: 114 KKKIVRCAVN 123
K +V+ V+
Sbjct: 729 SKTLVKLDVD 738
>gi|431908147|gb|ELK11750.1| Cleavage and polyadenylation specificity factor subunit 1 [Pteropus
alecto]
Length = 671
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
++++S ++T++L G+ + E+ SGF PT+ +GDN IVQV P GIR
Sbjct: 601 FLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIR 654
>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
Length = 1057
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 112 SDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPS 171
S + I +VN Q VI+L G+L+ ++ L+ ET ++ E+ C+ + P
Sbjct: 455 SSDELITVASVNPTQCVISLGFGKLVALQVLNRK--LNVIGET-RLSFEISCIDIH--PI 509
Query: 172 GEQM-SRFLAVGL--ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSD 228
G + S F+A+G ++ V L+SL+ + QK+L G + S+++ +
Sbjct: 510 GSRTESAFVALGTWNSNTNVCLLSLSDLQPIAQKSLGGTV-VPRSILISQFE-------- 560
Query: 229 EPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
+YL V L +G +D SG LSD + +LG P+ L G
Sbjct: 561 --------NTVYLLVALGDGQFYNFKLDSISGQLSDKKRTFLGKLPIHLSNFSLNG 608
>gi|297829750|ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328597|gb|EFH59016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1384
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V+SF T VLS+G + ++V+ S GF TL C + D +VQ++ D IR
Sbjct: 533 YHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVCTLACGLVADGLLVQIHQDAIR 589
>gi|348679545|gb|EGZ19361.1| putative cleavage and polyadenylation specificity factor CPSF
[Phytophthora sojae]
Length = 1752
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVS-GSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
++AY+++S ++ T+VL GE +E + SGFY + PTL + + + IVQ++ G R
Sbjct: 695 YNAYLILSVAHRTMVLRTGEGMEPLEDDSGFYTSGPTLAAANLFNKQRIVQIFKQGAR 752
>gi|301103686|ref|XP_002900929.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
gi|262101684|gb|EEY59736.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
Length = 1561
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVS-GSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
++AY+++S ++ T+VL GE +E + SGFY + PTL + + + IVQ++ G R
Sbjct: 522 YNAYLILSVAHRTMVLRTGEGMEPLEDDSGFYTSGPTLAAANLFNKQRIVQIFKQGAR 579
>gi|213407244|ref|XP_002174393.1| cleavage factor one Cft1 [Schizosaccharomyces japonicus yFS275]
gi|212002440|gb|EEB08100.1| cleavage factor one Cft1 [Schizosaccharomyces japonicus yFS275]
Length = 1431
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSA-MGDNSIVQVYPDGIR-- 57
E+D Y+VVS + V + GET +EV S F T+ +G IVQ+ +R
Sbjct: 586 EYDTYLVVSKEKESFVFTAGETFDEVEDSDFNTKGSTINVGGLLGGMRIVQICTTSLRVY 645
Query: 58 ----HIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEM 103
H+ + K K+ +V +V +V+ L GGR++ + M
Sbjct: 646 DPNIHLVQRINLGK--------KQNVVAASVCDPYVVLVLLGGRILLYSM 687
>gi|449526686|ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
sativus]
Length = 997
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +Y+V+SF T VLS+G + +V+ S GF T TL C + D ++Q++ + +R
Sbjct: 526 YHSYLVLSFVEETRVLSVGLSFIDVTDSVGFQSDTCTLACGLLDDGLVIQIHQNAVR 582
>gi|449437538|ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 1376
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +Y+V+SF T VLS+G + +V+ S GF T TL C + D ++Q++ + +R
Sbjct: 526 YHSYLVLSFVEETRVLSVGLSFIDVTDSVGFQSDTCTLACGLLDDGLVIQIHQNAVR 582
>gi|196012166|ref|XP_002115946.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
gi|190581722|gb|EDV21798.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
Length = 1187
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGD-NSIVQVYPDGIRHIGAKN 63
++++S N T++L G+ + EV GF T T+ + + N I+QV P + +
Sbjct: 469 FLIISRDNLTMILRTGKEITEVEQLGFLTQTKTVFAGNLDNGNCIIQVTPYEVILVSKGE 528
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
++ + ES IV C++ I + L+GG ++ +SD E K + +N
Sbjct: 529 KIQQLELENES---PIVFCSLQDPYISLLLEGGSIMMLAFE-LSDNGEKQVKLVNTTPLN 584
Query: 124 QRQI 127
+I
Sbjct: 585 HSRI 588
>gi|118354768|ref|XP_001010645.1| hypothetical protein TTHERM_00112500 [Tetrahymena thermophila]
gi|89292412|gb|EAR90400.1| hypothetical protein TTHERM_00112500 [Tetrahymena thermophila SB210]
Length = 2305
Score = 40.8 bits (94), Expect = 0.62, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 189 RLISLAPQDCLK---QKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGL 245
+L+S + C K Q NLQG+P++ I++ AS P+ S P V Y + L
Sbjct: 2129 QLLSATKKACFKTYFQSNLQGIPNVINIYKAIQIQASAPSQSQSPVTFVGNNWSYFEMQL 2188
Query: 246 QNGALLRMVVDQTSG 260
+ L+ M++D + G
Sbjct: 2189 KQNGLIYMIIDSSGG 2203
>gi|30681985|ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1329
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V+SF T VLS+G + ++V+ S GF T C + D +VQ++ D IR
Sbjct: 478 YHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVCTFACGLVADGLLVQIHQDAIR 534
>gi|6671952|gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
gi|10998135|dbj|BAB03106.1| unnamed protein product [Arabidopsis thaliana]
Length = 1331
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V+SF T VLS+G + ++V+ S GF T C + D +VQ++ D IR
Sbjct: 508 YHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVCTFACGLVADGLLVQIHQDAIR 564
>gi|449549048|gb|EMD40014.1| hypothetical protein CERSUDRAFT_63520 [Ceriporiopsis subvermispora
B]
Length = 1265
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 24/191 (12%)
Query: 105 PVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIY--------FEMHPETGILDECSETIQ 156
P S +++IV VN QIV+ L GG++ F++ G D +
Sbjct: 625 PKSQGAIGGRRRIVAADVNASQIVVGLDGGKVCLLNLADNSRFQVQRSRGFADPVYGPLD 684
Query: 157 MESEVLCMALSNAPSGEQMSRFLAVGL-ADNTVRLISLAPQDCLKQK--NLQGLPDLAES 213
+ S V C+ + + +AV N V+++S++ QD + GLP L S
Sbjct: 685 V-SAVSCVPFDRT---KNFATNIAVAFWGTNKVQILSISSQDATLATVCEVSGLPSLPRS 740
Query: 214 LVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSR 273
+++ G + EP + ++ VGL +G+++ V +L + ++ LG
Sbjct: 741 VLLHNFGTG--RTKKEPD-----FHPHVLVGLVDGSVISFSV--VENELKEKKVFSLGIA 791
Query: 274 PVKLFKIRCQG 284
PV L + G
Sbjct: 792 PVSLSRCEVDG 802
>gi|42564075|ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis thaliana]
gi|110739103|dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana]
gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
Length = 1379
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V+SF T VLS+G + ++V+ S GF T C + D +VQ++ D IR
Sbjct: 536 YHSFLVLSFVEETRVLSVGLSFKDVTDSVGFQSDVCTFACGLVADGLLVQIHQDAIR 592
>gi|255581562|ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223528782|gb|EEF30789.1| spliceosomal protein sap, putative [Ricinus communis]
Length = 1220
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V+SF T VLS+G + +V+ S GF TL C +GD +VQ++ +R
Sbjct: 528 YHSFVVLSFVEETRVLSVGVSFADVTDSAGFLPNVCTLACGLVGDGLLVQIHQTAVR 584
>gi|260835071|ref|XP_002612533.1| hypothetical protein BRAFLDRAFT_120973 [Branchiostoma floridae]
gi|229297910|gb|EEN68542.1| hypothetical protein BRAFLDRAFT_120973 [Branchiostoma floridae]
Length = 1003
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
++++S ++T+VL G+ + E+ SGF PT+ +G+N I+QV P GIR
Sbjct: 164 GFLILSREDSTMVLQTGKEIMELDHSGFSTQGPTVYAGNIGNNKYIIQVSPYGIR 218
>gi|307107849|gb|EFN56091.1| hypothetical protein CHLNCDRAFT_145620 [Chlorella variabilis]
Length = 1626
Score = 40.4 bits (93), Expect = 0.96, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTL-----CCSAMGDNSIVQVYPDGIR 57
AY+++SF AT VL+ GE + EV+ S F TPTL CC I Q +P G+R
Sbjct: 725 AYLLLSFQGATKVLATGEELREVTESVEFAVDTPTLAAGSVCCG----RRIAQAFPQGLR 780
Query: 58 HIGAKNTTWKV 68
+ + + V
Sbjct: 781 LLDGEESVQDV 791
>gi|390347522|ref|XP_003726804.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Strongylocentrotus purpuratus]
Length = 1439
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQV 51
A++++S ++++VL G+ + EV+ GF PT+ S MGD+ IVQV
Sbjct: 564 AFLILSKQDSSMVLQTGQEITEVAAGGFSTQAPTIFASNMGDDRYIVQV 612
>gi|158287218|ref|XP_309311.4| AGAP011340-PA [Anopheles gambiae str. PEST]
gi|157019545|gb|EAA05261.4| AGAP011340-PA [Anopheles gambiae str. PEST]
Length = 1434
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
A++++S T+VL GE + E+ +GF T PT+ +G N IVQV IR
Sbjct: 551 AFMILSQEGGTMVLQTGEEINEIENTGFATTVPTIHVGNIGTNRFIVQVTTKSIR 605
>gi|161899297|ref|XP_001712875.1| splicing factor 3b [Bigelowiella natans]
gi|75756369|gb|ABA27263.1| splicing factor 3b [Bigelowiella natans]
Length = 1158
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 24 EEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKN--TTWKVSDKKESDKKKIVR 81
EE +G + T+ CS + + SI+QV+ +GI I KN + W + E I
Sbjct: 496 EESHKTGLQESVKTIYCSILNETSIIQVFKEGIFWISKKNMISRWDIPKGSE-----ISI 550
Query: 82 CAVNQRQIVIALQGGRLIYFE 102
N Q+ + L+ ++YFE
Sbjct: 551 ATSNFSQLFVVLKSTWIMYFE 571
>gi|390358535|ref|XP_789715.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Strongylocentrotus purpuratus]
Length = 1223
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHI-GA 61
A++++S ++++VL G+ + EV+ GF PT+ S MGD+ IVQV I + G
Sbjct: 348 AFLILSKQDSSMVLQTGQEITEVAAGGFSTQAPTIFASNMGDDRYIVQVMNKSICLMEGV 407
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKK-KIVRC 120
+ V D I +C++ +++ + G I + P D++ S + + +
Sbjct: 408 EQIQHMVLDVGSP----IKQCSLADPYLLLLTENGDPILMTLKP--DQQGSGHRLHMTKP 461
Query: 121 AVNQRQIVIAL 131
++Q+ ++AL
Sbjct: 462 TLSQKSKIVAL 472
>gi|294873066|ref|XP_002766507.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
gi|239867408|gb|EEQ99224.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
Length = 276
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 EFDAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQ 50
E D YIVVSF + TL L + + + EV+ SGF PTL M D S +Q
Sbjct: 226 ESDRYIVVSFVDQTLTLLVTSDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQ 276
>gi|297739782|emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V+SF T VLS+G + +V+ S GF TL C + D +VQ++ +G++
Sbjct: 530 YHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGVVDDGLLVQIHKNGVK 586
>gi|387219217|gb|AFJ69317.1| dna damage-binding protein 1a, partial [Nannochloropsis gaditana
CCMP526]
Length = 383
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 51/210 (24%)
Query: 106 VSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMA 165
+S+ + +I A N Q+V+AL GG ++Y E+ L+E + I +E EV C++
Sbjct: 29 LSEWISAHGTRITVAAGNAMQVVLALSGGEVVYLELKANQRALEEKAR-IHLEHEVSCLS 87
Query: 166 LSNAPSG---------EQM-----------SRFL-AVG-LADNTVRLISLAPQDCLKQKN 203
+ G E M S FL AVG D +VRL++
Sbjct: 88 VHPLIPGPVPGEDGAEEAMQVEDGREEAPPSAFLVAVGTWTDLSVRLLA----------- 136
Query: 204 LQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL-----YLYVGLQNGALLRMVV--D 256
LP L +SL E+G SD A V L L YL VGL +G L+ V +
Sbjct: 137 ---LPSL-QSLHRCELG------SDTQARSVLLITLQADIHYLLVGLGDGFLVSFAVALE 186
Query: 257 QTSGDLSDNRMRYLGSRPVKLFKIRCQGNE 286
+ L + LG++P+ L E
Sbjct: 187 GKTPALGPRKKVSLGTQPLSLTPFSSTAAE 216
>gi|225441567|ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
Length = 1387
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V+SF T VLS+G + +V+ S GF TL C + D +VQ++ +G++
Sbjct: 530 YHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGVVDDGLLVQIHKNGVK 586
>gi|402223178|gb|EJU03243.1| hypothetical protein DACRYDRAFT_115454 [Dacryopinax sp. DJM-731
SS1]
Length = 1175
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 31/235 (13%)
Query: 73 ESDKKKIVR-----CAVNQRQ--IVIALQGGRLIYFEMHPVSDKKESDKK---KIVRCAV 122
ES+ + IVR A N R+ I + + G ++ ++ ++ ++ S K +IV AV
Sbjct: 495 ESEARGIVRQVPTLAAGNIREDDIFVQVTAGSVVAIDL--ITWEQRSIWKPHVEIVCAAV 552
Query: 123 NQRQIVIALQGGRLIYFEMHPETGIL--DECSETIQMESEVLCMALSNAPSGEQMSRFLA 180
N +++V L+GG L++ + I+ D S +E+ C+AL S E + + A
Sbjct: 553 NGQRVVAGLKGGYLVHLIPQRDQFIVANDWKSPGSWGLTEISCIALDPTLSAE-LGNYAA 611
Query: 181 VGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239
+G N V++ L + ++ P E + + + +S+ P
Sbjct: 612 IGFWGTNQVKIFYLGDETHRFEELKLAEPISPEDHLPVSTILTTFGTSNRP--------- 662
Query: 240 YLYVGLQNGAL------LRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEAN 288
+L VGL NG + +V+ + S +D ++ LG++P+ L G E+N
Sbjct: 663 HLLVGLGNGTISSYALKTEIVLGEPSVRATDKKIFSLGTKPIMLNACTDLGRESN 717
>gi|168021793|ref|XP_001763425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685218|gb|EDQ71614.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1452
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSA--MGDNSIVQVYPDGIRH 58
EF AY+++S + T+VL G+T+ EV+ + Y T + G +VQVY +G+R
Sbjct: 614 EFHAYLIISLESRTMVLETGDTLGEVTENVEYYTEGNTIAAGNLFGRRFVVQVYQNGLRL 673
Query: 59 I-GAK 62
+ GAK
Sbjct: 674 LDGAK 678
>gi|355698297|gb|EHH28845.1| Cleavage and polyadenylation specificity factor 160 kDa subunit
[Macaca mulatta]
Length = 1436
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAKN 63
++++S ++T+ G+ + E+ SGF PT+ +GDN IVQV P GIR + N
Sbjct: 600 FLILSREDSTMT---GQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVN 656
Query: 64 TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVN 123
+ + IV+CAV +VI G + F + S + + + ++
Sbjct: 657 QLHFIPVDLGA---PIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLH 713
Query: 124 QRQIVIAL 131
+ VI L
Sbjct: 714 HQSKVITL 721
>gi|260790329|ref|XP_002590195.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
gi|229275385|gb|EEN46206.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
Length = 1152
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 3 DAYIVVSFSNATLVLSI-GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGA 61
D +V++F T VL + GE VEE GF C + MG ++Q+ +R + +
Sbjct: 422 DDTLVLAFVGQTRVLLLSGEEVEETELPGFEDKQTFFCGNVMG-GQLLQITAASVRLV-S 479
Query: 62 KNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYF-EMH 104
+ T VS+ K +K I + N Q+V A+ G+++Y+ E+H
Sbjct: 480 RQTKQLVSEWKPPSEKNISVASSNTTQVVCAV--GQVVYYIEIH 521
>gi|345570887|gb|EGX53705.1| hypothetical protein AOL_s00006g33 [Arthrobotrys oligospora ATCC
24927]
Length = 1133
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 111/280 (39%), Gaps = 65/280 (23%)
Query: 2 FDAYIVVSFSNATLVLSIGE--TVEEV-SGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRH 58
FD ++ SF+N + + G VEEV + F+ T TL +G++ +VQV P
Sbjct: 439 FDDTLLFSFANESRAFAFGADGEVEEVDTFENFFLDTTTLEAGNVGNDKLVQVTP----- 493
Query: 59 IGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIV 118
++++ + ++ PV KIV
Sbjct: 494 ----------------------------FKVIVVEKATSKLWNWAPPVG-------AKIV 518
Query: 119 RCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRF 178
+++ ++V+ L G + F++ E I + T E+E+ C+ + + S F
Sbjct: 519 MASLSGARLVVVLNGRICLLFDLSSEP-IKQIANRT--FENEISCIHIPT-----KQSDF 570
Query: 179 LAVGL-ADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLG 237
L VG ++ L+ +A + +K+++L VM+ D SS
Sbjct: 571 LVVGFWMPASLALLRIADLETMKEEHLAVFEGSVPRSVMVANMEGDGPSS---------- 620
Query: 238 NLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277
L+VG+ +G ++ + + G L D + LG++ V
Sbjct: 621 ---LFVGMADGEVISYTITEGPGILDDQKRIRLGTQTVTF 657
>gi|312380158|gb|EFR26239.1| hypothetical protein AND_07834 [Anopheles darlingi]
Length = 1503
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
A++++S AT+VL GE + E+ +GF PT+ +G N IVQV IR
Sbjct: 555 AFMILSQEGATMVLQTGEEINEIENTGFATDVPTIHVGNIGSNRFIVQVTTKSIR 609
>gi|147860990|emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
Length = 1298
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V+SF T VLS+G + +V+ S GF TL C + D +VQ++ +G++
Sbjct: 571 YHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGVVDDGLLVQIHKNGVK 627
>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium
dendrobatidis JAM81]
Length = 1098
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 117 IVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMS 176
+ +V Q I+++L GG + FE + ++ +IQ++ EV C+ + E+++
Sbjct: 493 VTHASVYQNMILVSLGGGMIHLFEFNDRELVM---KRSIQIQVEVSCLHICKM---EELN 546
Query: 177 RFL-AVG-LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPV 234
L AVG DN+VRL+ +PDL+E I G + P S V
Sbjct: 547 VCLCAVGCWEDNSVRLLK--------------IPDLSEIQKEILPGDTIPRS----ILLV 588
Query: 235 TLGNL-YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284
NL YL V L +G L + + S L+D + L ++P+ L + G
Sbjct: 589 EFDNLPYLLVSLGDGQLFNFRIGK-SLKLADRKKITLATQPITLRTFQSHG 638
>gi|294950477|ref|XP_002786649.1| hypothetical protein Pmar_PMAR005356 [Perkinsus marinus ATCC 50983]
gi|239900941|gb|EER18445.1| hypothetical protein Pmar_PMAR005356 [Perkinsus marinus ATCC 50983]
Length = 1869
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 236 LGNLY-LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVK 276
+G L+ LY+GL NG L++ +D G L R R+LG +PV+
Sbjct: 1286 VGGLHSLYLGLTNGVLMKYSMDPDLGSLGRQRARFLGPKPVR 1327
>gi|443684051|gb|ELT88095.1| hypothetical protein CAPTEDRAFT_161045 [Capitella teleta]
Length = 1410
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
A++++S +++++VL G+ + E+ SGF PT+ + +G+ IVQV P+ I +
Sbjct: 555 AFLLLSRADSSMVLETGQEIMELDHSGFCTDAPTVHAANIGNGRYIVQVGPNAIWLLKGV 614
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
++ S +V C++ +++ + G+L++ + S + + ++ +
Sbjct: 615 ERIQHLALDVSS---PVVSCSLADPHVLLLCEDGQLLHLVL---SVQGDDPTLSLLTTKL 668
Query: 123 NQRQIVIALQGGR 135
+Q+ VIA+ R
Sbjct: 669 HQKSKVIAINLYR 681
>gi|284048171|ref|YP_003398510.1| NADH:flavin oxidoreductase [Acidaminococcus fermentans DSM 20731]
gi|283952392|gb|ADB47195.1| NADH:flavin oxidoreductase/NADH oxidase [Acidaminococcus fermentans
DSM 20731]
Length = 336
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 129 IALQGGRLIYFEM-HPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLAD 185
I+L GG I+F HPE G E S + + + + +GEQ +FLA G AD
Sbjct: 258 ISLSGGLCIFFRPGHPEAGYFAELSRAAKETARIPVLLTGGITTGEQAEQFLATGQAD 315
>gi|402582698|gb|EJW76643.1| CPSF A subunit region family protein [Wuchereria bancrofti]
Length = 418
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 204 LQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLS 263
L+ LP L E V+ E A D S P+ G++YL V L +G + +D +G L
Sbjct: 90 LRALPQLVE--VVREKIAGDMLSRSIMLSPME-GHVYLLVALGDGTVHYFQIDMKTGALL 146
Query: 264 DNRMRYLGSRPVKL--FKIRC 282
D + LG++P+ L F+ RC
Sbjct: 147 DPKKATLGTQPIHLRKFRSRC 167
>gi|170090007|ref|XP_001876226.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649486|gb|EDR13728.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1275
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAP--SGE 173
++V + N Q+V+A GG+L + + L+ + + E + A+S AP + +
Sbjct: 646 EVVAASANASQLVMAASGGKLTLWRLGENVDALEMIAGCQRKEGPEIS-AVSCAPLNTTK 704
Query: 174 QMSRFLAVG-LADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGA-SDPTSSDEPA 231
+ S + V NT+ ++ ++ + LP L S+++ G+ ++P +D
Sbjct: 705 RTSPTIIVSYWQSNTIEILQVSLKGLESVYKSPTLPALVRSVLLYNFGSDTNPKGTDH-- 762
Query: 232 GPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEANY 289
+ YL GL NG + L+D ++ LG PV L + +G A +
Sbjct: 763 ------HPYLLAGLANGTVASF--RWKDKQLTDKKIIPLGHAPVNLMPCQVEGRHAVF 812
>gi|312076590|ref|XP_003140929.1| CPSF A subunit region family protein [Loa loa]
Length = 655
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 126 QIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLAD 185
Q+VIA G LIY E ++ SE ++ E E+ C+ ++ + S AVG
Sbjct: 7 QLVIAC-GALLIYLE--ADSAGFKLISE-LECEFEISCIDITPIGNETLRSEICAVGYWT 62
Query: 186 NTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGL 245
+ +S+A L+ LP L E V+ E D S P+ G++YL V L
Sbjct: 63 D----LSVA---------LRTLPQLME--VVREKIPGDMLSRSIMLSPME-GHVYLLVAL 106
Query: 246 QNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL--FKIRC 282
+G + +D +G L D + LG++P+ L F+ RC
Sbjct: 107 GDGTVHYFQIDMKTGALLDPKKATLGTQPIHLRKFRSRC 145
>gi|452825139|gb|EME32137.1| cleavage and polyadenylation specificity factor subunit-like
protein [Galdieria sulphuraria]
Length = 1454
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 6 IVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCS-AMGDNSIVQVYPDGIRHIG 60
+++S T+VLS+ +T++E+ S F ++ TL S + D I+QV+ +G+R +G
Sbjct: 538 LILSTQRNTIVLSVSDTIDELVDSQFQTSSRTLWVSRVLHDRYIIQVFDEGLRILG 593
>gi|242021233|ref|XP_002431050.1| Cleavage and polyadenylation specificity factor 160 kDa subunit,
putative [Pediculus humanus corporis]
gi|212516279|gb|EEB18312.1| Cleavage and polyadenylation specificity factor 160 kDa subunit,
putative [Pediculus humanus corporis]
Length = 1409
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
A++++S ++T++L G+ + EV SGF PT+ + N IVQV G+R
Sbjct: 564 AFLILSQKDSTMILQTGQEINEVDHSGFNTQGPTIFAGNLASNKYIVQVSKAGVR 618
>gi|391328522|ref|XP_003738737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Metaseiulus occidentalis]
Length = 1500
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 5 YIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIR 57
++++S ++T++L G+ + E+ SGF +PT+ + D I+QV P+ +R
Sbjct: 630 FLILSRPDSTMILQTGQEINELDHSGFCTQSPTIFAGNLADGRYIIQVCPNSVR 683
>gi|358348136|ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
Length = 1370
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
++ +++V+SF T +LS+G + +V+ S GF TL C + D +VQ+Y ++
Sbjct: 528 QYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSAVK 585
>gi|308808936|ref|XP_003081778.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
gi|116060244|emb|CAL56303.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
Length = 1282
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 1 EFDAYIVVSFSNATLVLSI----GETVEEVSGSGFYGTTPTLCCSAM 43
+ D Y+VV+F N T +L G+T++E SGF TLCC M
Sbjct: 648 QVDKYLVVTFINETRILGFVGDEGDTLDETEISGFNAEAQTLCCGNM 694
>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
Length = 1114
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Query: 3 DAYIVVSFSNATLVLSIGETVE--EVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG 60
D ++VVSF+ T +L+I + E E GF TLC + +VQ G+R +
Sbjct: 430 DTHLVVSFAGETRILAIDDDDELAECEFRGFSANEQTLCVCNVDGGFVVQCVASGVRLVN 489
Query: 61 AKN----TTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRL 98
A + TW + + N+ Q ++A GG L
Sbjct: 490 AADGEPRATW-----SPPGGATVSVASANRTQALVATTGGSL 526
>gi|358348118|ref|XP_003638096.1| DNA damage-binding protein, partial [Medicago truncatula]
gi|355504031|gb|AES85234.1| DNA damage-binding protein, partial [Medicago truncatula]
Length = 822
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
++ +++V+SF T +LS+G + +V+ S GF TL C + D +VQ+Y ++
Sbjct: 528 QYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSAVK 585
>gi|452003044|gb|EMD95501.1| hypothetical protein COCHEDRAFT_1165632 [Cochliobolus
heterostrophus C5]
Length = 1116
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 32/191 (16%)
Query: 85 NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPE 144
N R + L GG + S+ +D K I +VN ++++L G ++ M
Sbjct: 488 NGRARICDLDGGMM-------TSEWVPADGKTITAASVNATHVLVSLGGVTIVSLSMADG 540
Query: 145 TGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNL 204
++ E +T ES+V C+ + PSG + F VG +N+ +++ D L+
Sbjct: 541 LQVVKE--KTFGAESQVACVTV---PSGTSSTCF--VGFWNNS--QLAICSLDTLEAVKT 591
Query: 205 QGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDL 262
+ D + SL++ ++ P S L+V L +G ++ D ++ +L
Sbjct: 592 VQISDDSVPRSLLLTQIFPDQPPS--------------LFVALADGNVVTYTFDPSNHEL 637
Query: 263 SDNRMRYLGSR 273
S + LG+R
Sbjct: 638 SGRKSIVLGTR 648
>gi|358348106|ref|XP_003638090.1| DNA damage-binding protein, partial [Medicago truncatula]
gi|355504025|gb|AES85228.1| DNA damage-binding protein, partial [Medicago truncatula]
Length = 642
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 1 EFDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
++ +++V+SF T +LS+G + +V+ S GF TL C + D +VQ+Y ++
Sbjct: 348 QYHSFLVLSFLGETRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSAVK 405
>gi|357111224|ref|XP_003557414.1| PREDICTED: DNA damage-binding protein 1-like [Brachypodium
distachyon]
Length = 1356
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 2 FDAYIVVSFSNATLVLSIGETVEEVSGS-GFYGTTPTLCCSAMGDNSIVQVYPDGIR 57
+ +++V++F T +LS+G + ++S + GF TL C + D +VQ++ G++
Sbjct: 546 YHSFLVLAFVEETRILSVGLSFNDISDAVGFQPDVCTLACGLIADGVLVQIHSKGVK 602
>gi|241060959|ref|XP_002408050.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215492346|gb|EEC01987.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 1241
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNS-IVQVYPDGIRHIGAK 62
A++++S ++++++L + + E+ SGF PT+ +GD ++QV P G+R +
Sbjct: 402 AFLILSRADSSMILQTDQEINELDHSGFSTQNPTVFAGNLGDGRYVLQVCPMGVRLL--- 458
Query: 63 NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAV 122
+ T ++ IV ++ ++I +GG +++ + D R AV
Sbjct: 459 DGTRQLQHIPLDVGSPIVGGSLADPHVLIRSEGGLVVHLTL-------RGDPASGCRLAV 511
Query: 123 NQRQIVIALQGGRLIYFEMH--PETGILDECSETIQMESE 160
+ Q+ A+ R H +G+LD+ E + +SE
Sbjct: 512 LRPQLT-AVVSHRANALTCHCIAVSGVLDDEDELLYGDSE 550
>gi|74318312|ref|YP_316052.1| phosphonate metabolism protein [Thiobacillus denitrificans ATCC
25259]
gi|74057807|gb|AAZ98247.1| phosphonate metabolism protein [Thiobacillus denitrificans ATCC
25259]
Length = 370
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 128 VIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGE-QMSRFLAVGLADN 186
V L+ G L HP TG L E E + E EV+ M + P G+ Q + N
Sbjct: 237 VAELRVGYLPVLLPHPVTGELAEAGEVLMTECEVVAMYAAAEPGGKPQFTVGYGACFGHN 296
Query: 187 TVRLISLAPQDCLKQKNLQGLP 208
V+ IS+A D QK +Q P
Sbjct: 297 EVKAISMAILDRALQKGMQDGP 318
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,414,408,946
Number of Sequences: 23463169
Number of extensions: 179264928
Number of successful extensions: 401363
Number of sequences better than 100.0: 674
Number of HSP's better than 100.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 297
Number of HSP's that attempted gapping in prelim test: 398993
Number of HSP's gapped (non-prelim): 1310
length of query: 290
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 149
effective length of database: 9,050,888,538
effective search space: 1348582392162
effective search space used: 1348582392162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)