Query psy14552
Match_columns 290
No_of_seqs 159 out of 541
Neff 7.1
Searched_HMMs 46136
Date Fri Aug 16 22:47:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14552.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14552hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1898|consensus 100.0 2.3E-38 4.9E-43 319.0 21.4 238 1-289 467-704 (1205)
2 KOG1897|consensus 100.0 7.4E-35 1.6E-39 292.6 26.0 230 1-289 417-646 (1096)
3 PF10433 MMS1_N: Mono-function 99.7 1.9E-15 4.1E-20 149.5 15.1 101 3-104 371-476 (504)
4 KOG1896|consensus 99.5 5.7E-12 1.2E-16 130.5 20.3 239 2-255 553-813 (1366)
5 KOG1898|consensus 99.3 7.1E-11 1.5E-15 121.2 15.9 164 73-253 536-716 (1205)
6 KOG1897|consensus 99.2 3.8E-10 8.3E-15 115.4 17.6 161 40-219 464-639 (1096)
7 COG5161 SFT1 Pre-mRNA cleavage 98.2 5.6E-06 1.2E-10 84.6 9.3 100 4-106 559-659 (1319)
8 PRK11028 6-phosphogluconolacto 97.6 0.069 1.5E-06 49.6 26.8 133 121-278 183-326 (330)
9 PF03178 CPSF_A: CPSF A subuni 97.5 0.07 1.5E-06 49.7 24.2 167 86-281 42-234 (321)
10 KOG2110|consensus 97.4 0.11 2.4E-06 49.3 23.4 210 37-260 89-334 (391)
11 PF10282 Lactonase: Lactonase, 97.0 0.3 6.6E-06 46.0 28.8 220 30-277 93-343 (345)
12 KOG0318|consensus 96.9 0.28 6.2E-06 48.5 20.7 110 75-195 405-518 (603)
13 COG2706 3-carboxymuconate cycl 96.7 0.49 1.1E-05 44.7 20.6 135 118-277 196-342 (346)
14 KOG0306|consensus 96.7 0.067 1.4E-06 54.9 15.2 139 47-195 377-539 (888)
15 KOG0291|consensus 96.6 1 2.3E-05 46.5 23.8 155 70-255 388-549 (893)
16 KOG2111|consensus 96.6 0.61 1.3E-05 43.6 21.6 145 41-195 100-257 (346)
17 PF00780 CNH: CNH domain; Int 96.4 0.26 5.6E-06 44.4 16.5 145 81-251 2-161 (275)
18 cd00200 WD40 WD40 domain, foun 96.3 0.62 1.3E-05 39.6 19.3 148 78-256 11-165 (289)
19 PF08596 Lgl_C: Lethal giant l 96.1 0.21 4.6E-06 48.4 15.0 180 79-283 4-204 (395)
20 PF03178 CPSF_A: CPSF A subuni 96.1 1.2 2.6E-05 41.4 21.9 161 79-254 91-263 (321)
21 KOG0318|consensus 96.0 1 2.2E-05 44.8 18.9 157 75-256 319-517 (603)
22 PRK11028 6-phosphogluconolacto 95.6 1.9 4E-05 39.9 26.3 215 30-277 41-279 (330)
23 KOG2110|consensus 95.5 1.9 4.1E-05 41.1 17.9 152 77-258 88-250 (391)
24 PTZ00421 coronin; Provisional 95.2 2.5 5.5E-05 42.2 19.2 109 82-196 36-158 (493)
25 KOG1538|consensus 95.1 0.84 1.8E-05 46.7 15.0 152 76-259 132-296 (1081)
26 cd00200 WD40 WD40 domain, foun 95.1 1.8 3.9E-05 36.7 22.0 140 86-256 63-207 (289)
27 PF14783 BBS2_Mid: Ciliary BBS 95.1 1.2 2.5E-05 35.6 13.0 93 125-250 16-108 (111)
28 KOG0647|consensus 95.1 0.93 2E-05 42.2 14.1 99 127-257 130-229 (347)
29 KOG0283|consensus 95.1 0.28 6.1E-06 50.5 11.8 102 125-257 380-482 (712)
30 PF10433 MMS1_N: Mono-function 95.0 0.059 1.3E-06 53.5 6.8 54 113-168 447-503 (504)
31 KOG1539|consensus 95.0 5.7 0.00012 41.7 26.9 108 79-196 165-277 (910)
32 PF10282 Lactonase: Lactonase, 94.7 3.8 8.3E-05 38.5 20.1 120 122-264 46-182 (345)
33 PF14779 BBS1: Ciliary BBSome 94.4 0.43 9.3E-06 43.6 10.1 79 157-253 175-255 (257)
34 KOG1274|consensus 94.3 0.69 1.5E-05 48.5 12.5 111 75-195 55-169 (933)
35 PLN00181 protein SPA1-RELATED; 94.2 4.6 0.0001 42.4 19.1 149 78-256 485-648 (793)
36 KOG0647|consensus 93.8 0.48 1E-05 44.1 9.3 98 157-282 26-123 (347)
37 KOG0266|consensus 93.8 7.3 0.00016 38.3 20.5 107 123-256 257-364 (456)
38 KOG0279|consensus 93.8 4.4 9.5E-05 37.5 15.3 107 121-255 201-312 (315)
39 KOG1036|consensus 93.7 6 0.00013 37.0 16.7 139 81-256 20-163 (323)
40 KOG2106|consensus 93.7 8.3 0.00018 38.5 21.7 101 85-198 379-481 (626)
41 KOG0310|consensus 93.6 7.3 0.00016 38.4 17.3 63 118-191 241-306 (487)
42 KOG1539|consensus 93.4 1.3 2.9E-05 46.1 12.6 123 126-278 174-305 (910)
43 KOG0299|consensus 93.4 8.7 0.00019 37.7 18.7 119 94-218 306-435 (479)
44 KOG2048|consensus 93.4 11 0.00023 38.7 18.5 68 123-201 121-191 (691)
45 KOG0316|consensus 93.3 6.2 0.00013 35.9 18.2 192 23-254 101-298 (307)
46 PF14783 BBS2_Mid: Ciliary BBS 93.1 3.3 7.1E-05 33.0 12.0 92 161-284 2-93 (111)
47 KOG1036|consensus 92.7 8.7 0.00019 35.9 20.2 153 75-258 53-209 (323)
48 KOG4649|consensus 92.6 8.4 0.00018 35.6 16.6 155 75-259 12-168 (354)
49 PLN00181 protein SPA1-RELATED; 92.5 16 0.00034 38.5 21.4 100 86-195 545-649 (793)
50 KOG0266|consensus 92.5 12 0.00025 36.9 19.2 110 121-261 212-321 (456)
51 KOG0646|consensus 92.3 7.1 0.00015 38.3 15.2 161 74-260 80-251 (476)
52 KOG2114|consensus 91.9 8 0.00017 40.8 15.9 115 116-257 27-156 (933)
53 KOG2106|consensus 91.6 16 0.00034 36.6 25.0 175 73-284 326-503 (626)
54 KOG0277|consensus 91.6 1.9 4.2E-05 39.4 9.9 94 93-194 35-135 (311)
55 KOG0296|consensus 90.8 16 0.00034 35.1 17.5 91 157-277 282-372 (399)
56 TIGR03300 assembly_YfgL outer 89.5 16 0.00035 34.3 15.0 133 85-253 240-376 (377)
57 KOG0294|consensus 89.4 17 0.00037 34.3 14.2 105 77-194 44-157 (362)
58 KOG0310|consensus 88.9 26 0.00056 34.7 20.1 107 124-261 208-316 (487)
59 KOG0291|consensus 88.0 38 0.00082 35.6 27.8 171 77-283 266-444 (893)
60 PF11768 DUF3312: Protein of u 87.7 4.5 9.8E-05 40.7 10.0 74 118-207 263-338 (545)
61 KOG2321|consensus 87.4 8 0.00017 39.2 11.4 123 127-280 148-279 (703)
62 PF12894 Apc4_WD40: Anaphase-p 87.3 1.9 4E-05 28.9 5.0 36 154-195 7-42 (47)
63 KOG2048|consensus 87.2 39 0.00085 34.8 20.3 146 78-255 27-183 (691)
64 KOG0270|consensus 86.9 19 0.0004 35.3 13.3 115 75-197 285-407 (463)
65 KOG0294|consensus 86.5 30 0.00064 32.7 16.1 70 118-195 46-116 (362)
66 KOG0319|consensus 86.4 5.6 0.00012 41.1 9.9 105 86-195 336-443 (775)
67 KOG2055|consensus 85.7 39 0.00085 33.4 18.0 149 75-255 256-416 (514)
68 KOG1407|consensus 85.3 16 0.00035 33.7 11.4 115 76-200 108-225 (313)
69 PF08596 Lgl_C: Lethal giant l 85.3 31 0.00067 33.5 14.3 72 122-195 95-174 (395)
70 KOG2445|consensus 85.2 34 0.00074 32.3 17.6 106 127-257 129-257 (361)
71 KOG1273|consensus 85.0 36 0.00077 32.3 15.2 170 84-286 33-210 (405)
72 KOG0283|consensus 84.9 14 0.00031 38.4 12.1 64 123-195 513-577 (712)
73 KOG2055|consensus 84.7 44 0.00095 33.1 21.1 103 80-194 309-417 (514)
74 KOG0646|consensus 84.3 20 0.00043 35.3 12.2 102 126-255 190-306 (476)
75 KOG2111|consensus 84.3 38 0.00081 32.0 19.8 68 76-143 181-257 (346)
76 KOG0277|consensus 84.0 35 0.00076 31.4 14.1 148 26-196 14-180 (311)
77 KOG0772|consensus 83.6 52 0.0011 33.1 15.4 160 74-255 164-346 (641)
78 KOG0296|consensus 83.6 43 0.00094 32.2 15.5 148 79-261 67-223 (399)
79 KOG1332|consensus 83.1 19 0.00041 33.0 10.8 64 127-196 73-136 (299)
80 KOG0299|consensus 83.0 17 0.00036 35.8 11.1 145 79-255 206-355 (479)
81 PF00400 WD40: WD domain, G-be 83.0 4.3 9.3E-05 24.7 5.0 30 157-192 10-39 (39)
82 KOG0772|consensus 82.9 25 0.00055 35.3 12.3 116 71-194 209-347 (641)
83 KOG1240|consensus 82.8 68 0.0015 35.6 16.4 120 118-256 1104-1225(1431)
84 KOG1645|consensus 82.7 5.1 0.00011 38.8 7.4 65 178-262 208-272 (463)
85 KOG0268|consensus 82.4 4.7 0.0001 38.6 7.0 63 126-197 286-348 (433)
86 KOG0306|consensus 82.2 71 0.0015 33.6 16.8 114 122-260 422-542 (888)
87 TIGR03866 PQQ_ABC_repeats PQQ- 81.9 35 0.00075 29.9 23.0 121 121-277 165-296 (300)
88 KOG0278|consensus 81.8 21 0.00045 32.9 10.5 137 44-197 154-300 (334)
89 KOG2321|consensus 80.9 12 0.00027 37.9 9.6 103 87-197 146-261 (703)
90 KOG3621|consensus 80.0 19 0.00042 37.2 10.8 115 74-195 33-155 (726)
91 KOG1538|consensus 79.5 42 0.00091 35.0 12.8 110 117-254 135-250 (1081)
92 PRK11138 outer membrane biogen 79.4 59 0.0013 30.9 15.5 135 85-255 255-393 (394)
93 KOG1274|consensus 78.1 1E+02 0.0022 33.0 20.2 152 79-256 101-262 (933)
94 KOG1188|consensus 78.1 65 0.0014 30.8 17.3 183 49-259 45-245 (376)
95 KOG0279|consensus 78.1 59 0.0013 30.3 17.7 65 121-195 114-181 (315)
96 KOG1332|consensus 77.9 47 0.001 30.5 11.5 114 122-258 21-136 (299)
97 KOG0301|consensus 77.7 63 0.0014 33.6 13.5 59 123-195 229-289 (745)
98 KOG1445|consensus 77.1 6.1 0.00013 40.5 6.2 103 83-194 588-708 (1012)
99 KOG0289|consensus 76.8 81 0.0018 31.1 19.9 171 3-193 315-505 (506)
100 KOG0281|consensus 75.2 12 0.00026 35.9 7.2 130 53-195 286-429 (499)
101 KOG2114|consensus 74.7 1.3E+02 0.0027 32.3 15.2 111 78-195 27-156 (933)
102 PTZ00420 coronin; Provisional 74.1 1.1E+02 0.0024 31.3 24.1 156 77-257 126-294 (568)
103 KOG1408|consensus 72.9 11 0.00024 39.3 6.8 68 121-195 468-535 (1080)
104 KOG1063|consensus 72.7 37 0.00081 35.2 10.5 80 113-194 616-699 (764)
105 KOG0272|consensus 72.4 18 0.00039 35.3 7.9 77 115-199 176-254 (459)
106 TIGR03300 assembly_YfgL outer 72.3 86 0.0019 29.4 17.1 99 84-194 63-163 (377)
107 KOG0295|consensus 71.9 98 0.0021 29.9 15.5 63 175-257 303-365 (406)
108 KOG0319|consensus 70.6 1.3E+02 0.0027 31.7 13.7 110 121-257 71-180 (775)
109 KOG2445|consensus 70.0 1E+02 0.0022 29.2 15.0 124 117-257 15-146 (361)
110 KOG0278|consensus 69.8 93 0.002 28.7 15.2 103 124-257 196-298 (334)
111 KOG0293|consensus 69.3 51 0.0011 32.4 10.1 113 118-257 230-343 (519)
112 KOG1034|consensus 68.9 1E+02 0.0023 29.4 11.8 116 74-198 36-170 (385)
113 PF02333 Phytase: Phytase; In 66.3 1.3E+02 0.0029 29.2 21.1 114 127-260 116-241 (381)
114 KOG2394|consensus 65.8 1.6E+02 0.0035 30.0 13.0 63 123-195 301-363 (636)
115 KOG3914|consensus 65.5 62 0.0013 31.3 9.9 115 74-199 107-228 (390)
116 PRK11138 outer membrane biogen 65.4 1.1E+02 0.0023 29.1 11.9 100 83-193 291-393 (394)
117 KOG0315|consensus 64.8 1.2E+02 0.0026 28.1 13.2 67 121-198 92-158 (311)
118 PF00780 CNH: CNH domain; Int 62.6 1.1E+02 0.0024 27.1 23.4 105 79-194 38-165 (275)
119 KOG1587|consensus 62.5 43 0.00094 34.1 8.8 52 135-195 223-274 (555)
120 TIGR03866 PQQ_ABC_repeats PQQ- 60.5 1.1E+02 0.0025 26.5 20.2 82 121-216 215-298 (300)
121 KOG0263|consensus 59.9 2.3E+02 0.005 29.8 14.6 68 122-199 545-612 (707)
122 KOG1517|consensus 59.9 2.4E+02 0.0052 31.3 13.7 133 56-196 1189-1335(1387)
123 TIGR02276 beta_rpt_yvtn 40-res 58.7 40 0.00087 20.6 5.8 38 176-216 3-41 (42)
124 KOG0289|consensus 58.6 2E+02 0.0042 28.6 20.1 106 79-195 308-420 (506)
125 COG2706 3-carboxymuconate cycl 58.6 1.7E+02 0.0038 27.9 15.2 108 127-257 5-120 (346)
126 KOG0288|consensus 57.2 2E+02 0.0043 28.3 12.3 61 124-195 353-418 (459)
127 KOG0274|consensus 56.7 2.3E+02 0.005 28.8 17.1 77 113-201 289-366 (537)
128 PF02239 Cytochrom_D1: Cytochr 56.5 1.9E+02 0.0041 27.7 17.8 74 121-208 45-119 (369)
129 KOG3621|consensus 56.2 1E+02 0.0022 32.2 10.0 111 118-257 38-155 (726)
130 KOG1523|consensus 55.9 48 0.001 31.4 7.1 101 74-193 65-175 (361)
131 PF12341 DUF3639: Protein of u 54.8 26 0.00057 20.7 3.4 26 159-192 2-27 (27)
132 KOG0639|consensus 54.0 2.5E+02 0.0054 28.5 12.0 199 47-280 423-644 (705)
133 KOG0645|consensus 53.9 1.9E+02 0.0041 27.0 15.5 69 121-198 70-139 (312)
134 KOG0293|consensus 53.7 1.1E+02 0.0023 30.2 9.3 91 94-195 332-426 (519)
135 KOG0270|consensus 51.8 2.5E+02 0.0054 27.8 14.7 118 127-272 302-420 (463)
136 KOG0263|consensus 51.1 1.2E+02 0.0027 31.6 9.8 64 121-195 586-650 (707)
137 PF11768 DUF3312: Protein of u 49.8 3E+02 0.0065 28.1 22.8 75 154-256 255-329 (545)
138 KOG1517|consensus 49.8 4.1E+02 0.0088 29.6 18.8 66 123-194 1220-1287(1387)
139 KOG0650|consensus 49.4 85 0.0018 32.3 8.1 55 123-186 411-465 (733)
140 KOG0321|consensus 49.4 80 0.0017 32.6 8.0 131 105-258 45-177 (720)
141 KOG0272|consensus 48.5 1.2E+02 0.0027 29.7 8.8 65 121-194 354-418 (459)
142 KOG0286|consensus 48.1 2.4E+02 0.0053 26.6 18.2 179 29-254 103-301 (343)
143 PTZ00420 coronin; Provisional 47.5 3.3E+02 0.0071 27.9 24.4 108 77-195 75-198 (568)
144 KOG4378|consensus 47.1 3.2E+02 0.007 27.7 15.2 154 75-258 120-282 (673)
145 KOG2096|consensus 46.4 2.2E+02 0.0048 27.2 9.9 66 121-195 95-164 (420)
146 PTZ00421 coronin; Provisional 46.4 3.2E+02 0.0069 27.4 27.0 109 77-195 126-246 (493)
147 KOG0315|consensus 46.2 2.5E+02 0.0053 26.0 17.6 131 124-285 52-190 (311)
148 KOG0284|consensus 45.5 43 0.00094 32.7 5.3 93 77-193 85-209 (464)
149 PF07569 Hira: TUP1-like enhan 44.1 1.3E+02 0.0028 26.6 7.9 83 154-260 8-99 (219)
150 KOG0301|consensus 43.9 3.9E+02 0.0084 28.0 11.9 57 178-257 232-289 (745)
151 KOG0271|consensus 43.7 1E+02 0.0022 30.0 7.4 58 127-195 220-277 (480)
152 KOG0302|consensus 43.4 3.2E+02 0.007 26.6 14.2 90 127-223 317-410 (440)
153 KOG1407|consensus 43.1 2.8E+02 0.0061 25.8 16.2 133 118-285 112-244 (313)
154 PF14655 RAB3GAP2_N: Rab3 GTPa 42.5 2.2E+02 0.0048 28.0 9.8 21 175-195 78-98 (415)
155 PF02333 Phytase: Phytase; In 41.7 2.7E+02 0.0058 27.1 10.1 66 186-265 127-199 (381)
156 KOG1963|consensus 41.4 2.4E+02 0.0053 30.0 10.3 71 118-195 211-282 (792)
157 smart00320 WD40 WD40 repeats. 41.3 55 0.0012 17.5 3.6 27 159-191 13-39 (40)
158 KOG0295|consensus 39.1 1.9E+02 0.0042 27.9 8.4 65 124-198 303-368 (406)
159 KOG0264|consensus 38.4 2.7E+02 0.0058 27.4 9.5 60 127-195 288-348 (422)
160 KOG0771|consensus 38.3 1.5E+02 0.0034 28.8 7.8 87 121-221 153-239 (398)
161 KOG0285|consensus 35.6 1.8E+02 0.004 28.1 7.7 67 161-256 154-223 (460)
162 KOG1240|consensus 35.2 2.5E+02 0.0053 31.6 9.4 70 176-260 1061-1132(1431)
163 KOG0286|consensus 35.0 4E+02 0.0086 25.2 11.8 69 118-195 102-175 (343)
164 KOG0269|consensus 34.6 4.7E+02 0.01 27.9 10.9 104 127-257 103-208 (839)
165 PF14727 PHTB1_N: PTHB1 N-term 34.1 4.6E+02 0.01 25.7 16.5 118 124-256 37-163 (418)
166 KOG0650|consensus 33.6 2.3E+02 0.0049 29.3 8.4 40 175-217 411-450 (733)
167 KOG1188|consensus 33.4 4.5E+02 0.0097 25.3 15.2 174 87-289 41-239 (376)
168 PF04762 IKI3: IKI3 family; I 33.1 6.8E+02 0.015 27.3 16.1 125 73-208 20-160 (928)
169 PF11715 Nup160: Nucleoporin N 32.4 5.2E+02 0.011 25.8 12.3 75 123-199 157-253 (547)
170 KOG1523|consensus 32.0 4.6E+02 0.01 25.0 13.6 113 78-197 12-133 (361)
171 KOG0640|consensus 31.8 65 0.0014 30.6 4.0 64 126-197 185-249 (430)
172 KOG1587|consensus 31.7 5.8E+02 0.013 26.1 17.2 189 75-285 241-465 (555)
173 KOG0265|consensus 31.1 4.6E+02 0.01 24.8 11.6 61 124-195 144-205 (338)
174 KOG0308|consensus 30.8 5.3E+02 0.012 27.0 10.5 71 159-255 214-284 (735)
175 KOG0271|consensus 30.7 5.3E+02 0.011 25.3 16.2 109 121-255 166-275 (480)
176 PF14781 BBS2_N: Ciliary BBSom 30.5 3.1E+02 0.0068 22.7 11.0 42 154-197 43-84 (136)
177 KOG0322|consensus 30.3 1.9E+02 0.0041 26.9 6.7 60 124-193 263-322 (323)
178 KOG0281|consensus 30.1 3E+02 0.0066 26.6 8.2 64 124-199 330-393 (499)
179 KOG0288|consensus 29.9 4E+02 0.0088 26.2 9.1 46 122-169 397-442 (459)
180 KOG1445|consensus 29.6 1.6E+02 0.0034 30.8 6.5 69 122-196 589-660 (1012)
181 KOG0273|consensus 29.5 5.9E+02 0.013 25.5 14.6 146 34-202 245-397 (524)
182 KOG3630|consensus 29.3 1.4E+02 0.0031 33.1 6.5 110 74-193 98-227 (1405)
183 PF14779 BBS1: Ciliary BBSome 29.2 3.2E+02 0.007 25.0 8.1 56 160-222 16-76 (257)
184 COG4247 Phy 3-phytase (myo-ino 28.8 4.9E+02 0.011 24.3 15.9 108 133-260 123-238 (364)
185 PF02239 Cytochrom_D1: Cytochr 28.2 5.3E+02 0.011 24.6 13.9 102 127-262 8-112 (369)
186 KOG0275|consensus 28.2 2.8E+02 0.0061 26.6 7.5 70 121-201 315-385 (508)
187 PF01011 PQQ: PQQ enzyme repea 27.6 1.5E+02 0.0033 18.1 4.1 29 240-272 2-30 (38)
188 KOG0771|consensus 27.1 81 0.0018 30.6 3.9 39 158-202 281-319 (398)
189 KOG0276|consensus 26.9 2.5E+02 0.0053 29.3 7.4 69 161-256 16-85 (794)
190 KOG2444|consensus 26.9 1.4E+02 0.003 27.0 5.1 65 125-197 71-135 (238)
191 KOG1645|consensus 26.5 2.7E+02 0.0058 27.4 7.3 61 124-194 206-266 (463)
192 smart00564 PQQ beta-propeller 25.7 1.1E+02 0.0024 17.6 3.1 21 240-262 8-28 (33)
193 TIGR02658 TTQ_MADH_Hv methylam 25.4 6E+02 0.013 24.3 25.8 203 30-277 111-348 (352)
194 KOG0308|consensus 24.6 8.3E+02 0.018 25.6 12.3 107 121-257 222-328 (735)
195 PF12234 Rav1p_C: RAVE protein 24.5 8.2E+02 0.018 25.5 12.4 117 117-255 34-156 (631)
196 KOG0316|consensus 23.2 6E+02 0.013 23.4 15.9 138 113-286 58-197 (307)
197 KOG4640|consensus 23.2 2.6E+02 0.0056 29.0 6.7 75 89-166 35-113 (665)
198 PF14781 BBS2_N: Ciliary BBSom 23.0 4.4E+02 0.0095 21.8 8.7 68 176-257 10-82 (136)
199 PRK04968 SecY interacting prot 22.2 1.2E+02 0.0026 26.3 3.8 38 236-276 125-162 (181)
200 PF13540 RCC1_2: Regulator of 21.9 1.8E+02 0.0039 17.0 5.0 24 79-102 1-24 (30)
201 PF13360 PQQ_2: PQQ-like domai 21.2 5E+02 0.011 21.9 15.5 107 76-194 26-140 (238)
202 KOG2079|consensus 20.7 6.1E+02 0.013 28.2 9.1 68 125-201 100-167 (1206)
203 PF13570 PQQ_3: PQQ-like domai 20.4 1.3E+02 0.0029 18.5 2.8 15 240-254 23-37 (40)
204 KOG1310|consensus 20.2 3E+02 0.0065 28.3 6.4 103 85-192 106-229 (758)
205 KOG0303|consensus 20.0 8.5E+02 0.018 24.0 12.8 111 81-197 39-165 (472)
No 1
>KOG1898|consensus
Probab=100.00 E-value=2.3e-38 Score=319.03 Aligned_cols=238 Identities=52% Similarity=0.889 Sum_probs=214.0
Q ss_pred CcceEEEEEcCCceEEEEeCCEEEEeecCCccCCCCeEEEEeeCCCeEEEEecCCeEEEeecCcceeeeccCCCCCceEE
Q psy14552 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIV 80 (290)
Q Consensus 1 ~~~~ylvlS~~~~T~vl~~~~~~~e~~~~gf~~~~~Ti~~~~~~~~~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~~Iv 80 (290)
.||.||++||.++|+||++|+.+||++++||..+.+|++|+.|+++++|||+++++|++-..++
T Consensus 467 ~ydsyivvsF~n~TlVLsIgesveEvtdsgFls~~~Tl~~~l~Gd~slVQi~~d~iRhi~~~~r---------------- 530 (1205)
T KOG1898|consen 467 VYDSYIVVSFVNGTLVLSIGESVEEVTDSGFLSTTPTLACSLMGDDSLVQIHPDGIRHIRPTKR---------------- 530 (1205)
T ss_pred ccceEEEEEeeccEEEEEcchhHHHhhhcccccCCceEEEEEecCCcEEEEchhhhhhcccccc----------------
Confidence 4899999999999999999999999999999999999999999999999999999999866553
Q ss_pred EEeecCceEEEEeeCCeEEEEEecCCCceecCCCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcc
Q psy14552 81 RCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESE 160 (290)
Q Consensus 81 ~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~e 160 (290)
..+|..|+++.|+.|+.|+.|++||+++++++||+++. ++++.|+.++.++..+
T Consensus 531 -------------------------~~ew~~P~~~~Iv~~avnr~qiVvalSngelvyfe~d~-sgql~E~~er~tl~~~ 584 (1205)
T KOG1898|consen 531 -------------------------INEWKTPERVRIVKCAVNRRQIVVALSNGELVYFEGDV-SGQLNEFTERVTLSTD 584 (1205)
T ss_pred -------------------------cccccCCCceEEEEEeecceEEEEEccCCeEEEEEecc-Cccceeeeeeeeecee
Confidence 34787888877787788888888888888888888775 5778887677889999
Q ss_pred eeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceE
Q psy14552 161 VLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240 (290)
Q Consensus 161 i~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
++|+++.+...+.+++.||++|..|+++++++|++..+|...+.|.|+..|+|+++++|...+++ ...++|
T Consensus 585 vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d~l~~ls~q~l~~~~~s~~iv~~~~~~~~---------~~~~L~ 655 (1205)
T KOG1898|consen 585 VACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQPLSVQGLSSPPESLCIVEMEATGGT---------DVAQLY 655 (1205)
T ss_pred ehhhccCCCCcchhhcceeeeeccccceeEEEecCcceEEEccccccCCCccceEEEEecccCCc---------cceeEE
Confidence 99999999888888999999999999999999999999999999999999999999999765321 135899
Q ss_pred EEEEecCceEEEEEEeCCCCcccccceEEecCcceEEEEEEeCCceeec
Q psy14552 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEANY 289 (290)
Q Consensus 241 L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l~~~~~~~~~~~~ 289 (290)
|++||+||+|+|+.+|..+|.|.|.|+|+||.+||+++++..+|+.+++
T Consensus 656 l~~GL~NGvllR~~id~v~G~l~d~rtR~lG~~pvkLf~~~~~~~s~vL 704 (1205)
T KOG1898|consen 656 LLIGLRNGVLLRFVIDTVTGQLLDIRTRFLGLRPVKLFPISMRGQSDVL 704 (1205)
T ss_pred EEecccccEEEEEEecccccceeeeheeeeccccceEEEEeecCcceeE
Confidence 9999999999999999999999999999999999999999999998875
No 2
>KOG1897|consensus
Probab=100.00 E-value=7.4e-35 Score=292.62 Aligned_cols=230 Identities=31% Similarity=0.476 Sum_probs=200.4
Q ss_pred CcceEEEEEcCCceEEEEeCCEEEEeecCCccCCCCeEEEEeeCCCeEEEEecCCeEEEeecCcceeeeccCCCCCceEE
Q psy14552 1 EFDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIV 80 (290)
Q Consensus 1 ~~~~ylvlS~~~~T~vl~~~~~~~e~~~~gf~~~~~Ti~~~~~~~~~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~~Iv 80 (290)
++|.|||+||+++|++|.++++++|.+++||.+++|||+|+++.++.++|||+++||+++....
T Consensus 417 ~~d~ylvlsf~~eTrvl~i~~e~ee~~~~gf~~~~~Tif~S~i~g~~lvQvTs~~iRl~ss~~~---------------- 480 (1096)
T KOG1897|consen 417 NYDNYLVLSFISETRVLNISEEVEETEDPGFSTDEQTIFCSTINGNQLVQVTSNSIRLVSSAGL---------------- 480 (1096)
T ss_pred cCCcEEEEEeccceEEEEEccceEEeccccccccCceEEEEccCCceEEEEecccEEEEcchhh----------------
Confidence 4788999999999999999888999999999999999999999999999999999999976522
Q ss_pred EEeecCceEEEEeeCCeEEEEEecCCCceecCCCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcc
Q psy14552 81 RCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESE 160 (290)
Q Consensus 81 ~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~e 160 (290)
..+|.+|.++.|.+|.+|..|++||..+..+.|+++.+ ..|.+. .+..+..|
T Consensus 481 -------------------------~~~W~~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~--~~l~e~-~~~~~e~e 532 (1096)
T KOG1897|consen 481 -------------------------RSEWRPPGKITIGVVSANASQVVVAGGGLALFYLEIED--GGLREV-SHKEFEYE 532 (1096)
T ss_pred -------------------------hhcccCCCceEEEEEeecceEEEEecCccEEEEEEeec--cceeee-eeheecce
Confidence 56899999888888888888999998788888888887 236665 46789999
Q ss_pred eeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceE
Q psy14552 161 VLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240 (290)
Q Consensus 161 i~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
++|++|.|.++++.++.+++||+|+..+.++...|+..+..........+|||+++..+++ ...|
T Consensus 533 vaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~---------------d~~y 597 (1096)
T KOG1897|consen 533 VACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEG---------------DIHY 597 (1096)
T ss_pred eEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeec---------------cceE
Confidence 9999999887666688999999997766666666665555554456677999999999732 2789
Q ss_pred EEEEecCceEEEEEEeCCCCcccccceEEecCcceEEEEEEeCCceeec
Q psy14552 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQGNEANY 289 (290)
Q Consensus 241 L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l~~~~~~~~~~~~ 289 (290)
|+|+++||++++|.+|..+|.++++|++.||++|++|+.++.+++.++|
T Consensus 598 LlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vf 646 (1096)
T KOG1897|consen 598 LLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVF 646 (1096)
T ss_pred EEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEE
Confidence 9999999999999999999999999999999999999999999999987
No 3
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=99.65 E-value=1.9e-15 Score=149.53 Aligned_cols=101 Identities=43% Similarity=0.693 Sum_probs=68.9
Q ss_pred ceEEEEEcCCceEEEEeC-----CEEEEeecCCccCCCCeEEEEeeCCCeEEEEecCCeEEEeecCcceeeeccCCCCCc
Q psy14552 3 DAYIVVSFSNATLVLSIG-----ETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKK 77 (290)
Q Consensus 3 ~~ylvlS~~~~T~vl~~~-----~~~~e~~~~gf~~~~~Ti~~~~~~~~~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~ 77 (290)
|.|||+|++++|+||+++ ++++|++..+|.++++||+||+++++.+||||+++||+++.+.... ....+||.+.
T Consensus 371 ~~~lv~S~~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~~~~ivQVt~~~i~l~~~~~~~~-~~~w~~~~~~ 449 (504)
T PF10433_consen 371 HSYLVLSFPNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVGDGRIVQVTPKGIRLIDLEDGKL-TQEWKPPAGS 449 (504)
T ss_dssp BSEEEEEESSEEEEEEES----SSEEEEE---TS-SSS-EEEEEEETTTEEEEEESSEEEEEESSSTSE-EEEEE-TTS-
T ss_pred ceEEEEEcCCceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcCCCeEEEEecCeEEEEECCCCeE-EEEEeCCCCC
Confidence 789999999999999994 5677775459999999999999999999999999999997543211 1222355555
Q ss_pred eEEEEeecCceEEEEeeCCeEEEEEec
Q psy14552 78 KIVRCAVNQRQIVIALQGGRLIYFEMH 104 (290)
Q Consensus 78 ~Iv~as~n~~qv~ial~~g~i~~~~~~ 104 (290)
.|++|++|++|+++++++|++.||+++
T Consensus 450 ~I~~a~~~~~~v~v~~~~~~~~~~~~~ 476 (504)
T PF10433_consen 450 IIVAASINDPQVLVALSGGELVYFELD 476 (504)
T ss_dssp --SEEEESSSEEEEEE-TTEEEEEEEE
T ss_pred eEEEEEECCCEEEEEEeCCcEEEEEEE
Confidence 666666666666666555555555554
No 4
>KOG1896|consensus
Probab=99.45 E-value=5.7e-12 Score=130.50 Aligned_cols=239 Identities=19% Similarity=0.274 Sum_probs=148.9
Q ss_pred cceEEEEEcCCceEEEEeCCEEEEeecCCccCCCCeEEEEeeCCC-eEEEEecCCeEEEeecCcceeeeccCCCCCceEE
Q psy14552 2 FDAYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDN-SIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIV 80 (290)
Q Consensus 2 ~~~ylvlS~~~~T~vl~~~~~~~e~~~~gf~~~~~Ti~~~~~~~~-~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~~Iv 80 (290)
.|.|+++|.+++|+||++|+++.|++.++|..+.+||++|+++++ .||||||+++|++|.+.. -++.++.+.+..++
T Consensus 553 ~h~~lilS~e~~t~il~tge~~~Ev~~s~f~~~~~Tl~~gnlg~~rriVQVtp~~~rllDg~~r--~lq~i~fd~~~~vv 630 (1366)
T KOG1896|consen 553 QHLYLILSTESRTMILETGEELLEVSGSGFTRDGPTLFAGNLGNERRIVQVTPSGLRLLDGDLR--MLQRIPFDSGAIVV 630 (1366)
T ss_pred cceEEEeecccchhhhhccchhhhcccceeEeccceEEEEecCCceEEEEEccceeEEecCcch--heeEeccccCCcEE
Confidence 489999999999999999999999999999999999999999996 699999999999987532 26678889999999
Q ss_pred EEeecCceEEEEeeCCeEEEEEecCCC-ceec--CCCceE--EEE--EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeee
Q psy14552 81 RCAVNQRQIVIALQGGRLIYFEMHPVS-DKKE--SDKKKI--VRC--AVNQRQIVIALQGGRLIYFEMHPETGILDECSE 153 (290)
Q Consensus 81 ~as~n~~qv~ial~~g~i~~~~~~~~~-~~~~--~~~~~I--i~a--s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~ 153 (290)
.+++.|+||++-.++|++.+|++++.. ++.. |....+ ++| +.++.....+. +............
T Consensus 631 ~~sv~dpyv~v~~~~g~i~~~~l~~~s~rl~~~~~~s~~~~sv~~~~dlsg~f~~~s~---------l~~k~~~~~gr~~ 701 (1366)
T KOG1896|consen 631 QTSVADPYVAVRSSEGRITLYDLEEKSHRLALHDPMSFKVVSVSLPADLSGMFTTLSD---------LSLKGNEANGRSS 701 (1366)
T ss_pred EEeccCceEEEEEcCCceEEEEeccccchhhccCcccceeEEEechhhhccceEEEee---------ecccCcccccccc
Confidence 999999999999999999999997652 2211 211122 222 12233333331 1100000000000
Q ss_pred -eeecCcceeEEEeeeCCCC--CccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCC--CCCCCC
Q psy14552 154 -TIQMESEVLCMALSNAPSG--EQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS--DPTSSD 228 (290)
Q Consensus 154 -~~~l~~ei~~l~i~~~~~~--~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~--~~~~~~ 228 (290)
.-.+...+ .+....+.+ .+...++++...+|.+.+|.++..+.+..+.... .-++.+........ ...+.+
T Consensus 702 ~~~~~~~~~--~kv~~~egg~~~~~~~~~~~~~e~g~leiy~~pd~~lVf~v~~f~--~~~~~L~~~~~~~~~~~~~s~~ 777 (1366)
T KOG1896|consen 702 EAEGLQSLP--CKVDDEEGGSPEQEPYWCVFVTESGTLEIYALPDFDLVFEVDMFD--TGNRVLMDSRLRGPTTNKESED 777 (1366)
T ss_pred cccccccCC--ccccCCCCCCcccCceEEEEEcCCCceEEEccCCcceEEEeeccC--CCcceEEeecccCccccccccc
Confidence 00000111 111100000 0112677777789999999998656555554333 23444444333222 111111
Q ss_pred --------CCCCCc-cCCceEEEEEecCceEEEEEE
Q psy14552 229 --------EPAGPV-TLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 229 --------~~~~~~-~~~~~~L~iGl~dG~l~~~~~ 255 (290)
.|=+.. .....+|+.=+.+|.++-|+.
T Consensus 778 ~~l~q~~~~~L~~e~~~~e~~L~lv~~~~eil~Yka 813 (1366)
T KOG1896|consen 778 LELKQLFVNPLGSEIVFKEPHLFLVVSDNEILIYKA 813 (1366)
T ss_pred hHHHHhhccccchhhhccCCceEEEEeCceEEEEee
Confidence 111111 124567999999999988885
No 5
>KOG1898|consensus
Probab=99.29 E-value=7.1e-11 Score=121.25 Aligned_cols=164 Identities=21% Similarity=0.310 Sum_probs=119.0
Q ss_pred CCCCceEEEEeecCceEEEEeeCCeEEEEEecCCCceecC-CCceE---EEE-EeC-------CCE-EEEEEeCCeEEEE
Q psy14552 73 ESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKES-DKKKI---VRC-AVN-------QRQ-IVIALQGGRLIYF 139 (290)
Q Consensus 73 ~~~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~-~~~~I---i~a-s~~-------~~~-l~Val~~~~i~~l 139 (290)
+|++.+|+.|++|++|+++|++||+++|||++..+++.+- +++++ ++| +.. +.+ +++|+.++.++++
T Consensus 536 ~P~~~~Iv~~avnr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vrii 615 (1205)
T KOG1898|consen 536 TPERVRIVKCAVNRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRII 615 (1205)
T ss_pred CCCceEEEEEeecceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEE
Confidence 7999999999999999999999999999999987777663 45555 777 422 122 9999999999999
Q ss_pred EEcCCCCCceeeeeeee---cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC-CceeEeeEEecCCcceEEE
Q psy14552 140 EMHPETGILDECSETIQ---MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ-DCLKQKNLQGLPDLAESLV 215 (290)
Q Consensus 140 ~l~~~~~~l~~~~~~~~---l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~-~~l~~~~~~~L~~~p~Sl~ 215 (290)
+++++ ..|..+. ... .|.+..++.+.....+.....||++|+.+|.+.++.+|.- +.|.+.+...||..|..+.
T Consensus 616 sL~p~-d~l~~ls-~q~l~~~~~s~~iv~~~~~~~~~~~~L~l~~GL~NGvllR~~id~v~G~l~d~rtR~lG~~pvkLf 693 (1205)
T KOG1898|consen 616 SLDPS-DCLQPLS-VQGLSSPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRFVIDTVTGQLLDIRTRFLGLRPVKLF 693 (1205)
T ss_pred EecCc-ceEEEcc-ccccCCCccceEEEEecccCCccceeEEEEecccccEEEEEEecccccceeeeheeeeccccceEE
Confidence 99983 4443321 112 3445555555433211124789999999999999999874 5688888899999999888
Q ss_pred EEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEE
Q psy14552 216 MIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRM 253 (290)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~ 253 (290)
.+.|..+ ...|...-|++.++.+
T Consensus 694 ~~~~~~~---------------s~vL~lSsr~wl~y~~ 716 (1205)
T KOG1898|consen 694 PISMRGQ---------------SDVLALSSRPWLLYTY 716 (1205)
T ss_pred EEeecCc---------------ceeEEecCChhhhhhh
Confidence 7776432 3345666666655544
No 6
>KOG1897|consensus
Probab=99.23 E-value=3.8e-10 Score=115.43 Aligned_cols=161 Identities=22% Similarity=0.286 Sum_probs=121.2
Q ss_pred EEeeCCCeEEEEecCCeEEEeecCcceeeeccCCCCCceEEEEeecCceEEEEeeCCeEEEEEecCCCceecCCCceE--
Q psy14552 40 CSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKI-- 117 (290)
Q Consensus 40 ~~~~~~~~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~I-- 117 (290)
.-|+..+.|.-+...+.+- . |. ||.++.|.+|++|.-||++|..++.++|+++++.. +.+..++++
T Consensus 464 lvQvTs~~iRl~ss~~~~~-----~-W~-----~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~-l~e~~~~~~e~ 531 (1096)
T KOG1897|consen 464 LVQVTSNSIRLVSSAGLRS-----E-WR-----PPGKITIGVVSANASQVVVAGGGLALFYLEIEDGG-LREVSHKEFEY 531 (1096)
T ss_pred EEEEecccEEEEcchhhhh-----c-cc-----CCCceEEEEEeecceEEEEecCccEEEEEEeeccc-eeeeeeheecc
Confidence 3455566677776664332 2 33 89999999999999999999999999999998554 777777777
Q ss_pred -EEE-EeC-----CC---EEEEEEeCCeEEEEEEcCCCCCceee--eeeeecCcceeEEEeeeCCCCCccccEEEEEeCC
Q psy14552 118 -VRC-AVN-----QR---QIVIALQGGRLIYFEMHPETGILDEC--SETIQMESEVLCMALSNAPSGEQMSRFLAVGLAD 185 (290)
Q Consensus 118 -i~a-s~~-----~~---~l~Val~~~~i~~l~l~~~~~~l~~~--~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~d 185 (290)
++| +.+ +. +++||+|+..+..+...|+ ..+... +.-..+|++|.+..+.. ...||.|+++|
T Consensus 532 evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd-~~~~~~~~l~~~~iPRSIl~~~~e~------d~~yLlvalgd 604 (1096)
T KOG1897|consen 532 EVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPD-LILITHEQLSGEIIPRSILLTTFEG------DIHYLLVALGD 604 (1096)
T ss_pred eeEEEecccCCCCCCcceEEEEEeecceEEEEEECCC-cceeeeeccCCCccchheeeEEeec------cceEEEEEcCC
Confidence 888 532 22 4999999888777766653 322111 11224899999988862 26899999999
Q ss_pred CeEEEEEeCCC-CceeEeeEEecCCcceEEEEEEe
Q psy14552 186 NTVRLISLAPQ-DCLKQKNLQGLPDLAESLVMIEM 219 (290)
Q Consensus 186 g~v~i~~l~~~-~~l~~~~~~~L~~~p~Sl~~~~~ 219 (290)
|.+.+|.++.. ..+.+.++..||+.|.++.-..+
T Consensus 605 G~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~s 639 (1096)
T KOG1897|consen 605 GALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSS 639 (1096)
T ss_pred ceEEEEEEEcccceEccccccccCCCCcEEEEEee
Confidence 99999999864 46888888999999999987765
No 7
>COG5161 SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification]
Probab=98.21 E-value=5.6e-06 Score=84.57 Aligned_cols=100 Identities=13% Similarity=0.191 Sum_probs=84.2
Q ss_pred eEEEEEcCCceEEEEeCCEEEEeecCCccCCCCeEEEEeeCCC-eEEEEecCCeEEEeecCcceeeeccCCCCCceEEEE
Q psy14552 4 AYIVVSFSNATLVLSIGETVEEVSGSGFYGTTPTLCCSAMGDN-SIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIVRC 82 (290)
Q Consensus 4 ~ylvlS~~~~T~vl~~~~~~~e~~~~gf~~~~~Ti~~~~~~~~-~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~~Iv~a 82 (290)
.|.++|...+|.||+-++++.+.....|..+..|++++.++++ .+|||||+..+++|.+-.. ++-.+ -+.+-|++.
T Consensus 559 ~~~~ls~~s~S~If~~~e~f~l~~~g~~~rd~~Tl~~~~fgee~rvVQvtp~~l~~yD~~lR~--l~~~~-F~~~~V~~~ 635 (1319)
T COG5161 559 DFYILSRVSDSRIFRWSEEFLLEVSGEYTRDVNTLLFVEFGEENRVVQVTPSYLLRYDQDLRM--LGRVE-FASRAVEAR 635 (1319)
T ss_pred eEEEeecccccceeeccccceeeecceeeccccEEEeeeccCcceEEEecchHhhhhccccee--eeeEe-eceeeeEEE
Confidence 5899999999999999999999998999999999999999985 7999999999999865211 11111 234478999
Q ss_pred eecCceEEEEeeCCeEEEEEecCC
Q psy14552 83 AVNQRQIVIALQGGRLIYFEMHPV 106 (290)
Q Consensus 83 s~n~~qv~ial~~g~i~~~~~~~~ 106 (290)
|+.||++++...+|.+..|++++.
T Consensus 636 Sv~Dp~ilvv~~~g~i~~f~~~ek 659 (1319)
T COG5161 636 SVRDPLILVVRDSGKILTFYDREK 659 (1319)
T ss_pred eccCCEEEEEEecCceEEEEehhh
Confidence 999999999999999999998754
No 8
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.56 E-value=0.069 Score=49.55 Aligned_cols=133 Identities=14% Similarity=0.133 Sum_probs=86.8
Q ss_pred EeCCCEEEEEEe-CCeEEEEEEcCCCCCceeeeeeee-cCc------ceeEEEeeeCCCCCccccEEEEEeC-CCeEEEE
Q psy14552 121 AVNQRQIVIALQ-GGRLIYFEMHPETGILDECSETIQ-MES------EVLCMALSNAPSGEQMSRFLAVGLA-DNTVRLI 191 (290)
Q Consensus 121 s~~~~~l~Val~-~~~i~~l~l~~~~~~l~~~~~~~~-l~~------ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v~i~ 191 (290)
+.++..+.|+.. +++|.++.+++.++.+... .... +|. -.+.+.+.+ ...+++|+.. ++.|.+|
T Consensus 183 ~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~i~~~p------dg~~lyv~~~~~~~I~v~ 255 (330)
T PRK11028 183 HPNQQYAYCVNELNSSVDVWQLKDPHGEIECV-QTLDMMPADFSDTRWAADIHITP------DGRHLYACDRTASLISVF 255 (330)
T ss_pred CCCCCEEEEEecCCCEEEEEEEeCCCCCEEEE-EEEecCCCcCCCCccceeEEECC------CCCEEEEecCCCCeEEEE
Confidence 456667777765 8899999998532444332 2222 222 222344443 2468889875 8899999
Q ss_pred EeCCCC-ceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEec-CceEEEEEEeCCCCcccccceEE
Q psy14552 192 SLAPQD-CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQ-NGALLRMVVDQTSGDLSDNRMRY 269 (290)
Q Consensus 192 ~l~~~~-~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~-dG~l~~~~~d~~~~~l~~~~~~~ 269 (290)
.++++. .++.+.....+..|+.+.+.. ...+|+++-+ +|.+.-|++|..++.|.......
T Consensus 256 ~i~~~~~~~~~~~~~~~~~~p~~~~~~~------------------dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~ 317 (330)
T PRK11028 256 SVSEDGSVLSFEGHQPTETQPRGFNIDH------------------SGKYLIAAGQKSHHISVYEIDGETGLLTELGRYA 317 (330)
T ss_pred EEeCCCCeEEEeEEEeccccCCceEECC------------------CCCEEEEEEccCCcEEEEEEcCCCCcEEEccccc
Confidence 997653 455555455555677764442 2345888876 99999999998888876666666
Q ss_pred ecCcceEEE
Q psy14552 270 LGSRPVKLF 278 (290)
Q Consensus 270 lG~~pv~l~ 278 (290)
.|..|+-+.
T Consensus 318 ~g~~P~~~~ 326 (330)
T PRK11028 318 VGQGPMWVS 326 (330)
T ss_pred cCCCceEEE
Confidence 798887663
No 9
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.54 E-value=0.07 Score=49.66 Aligned_cols=167 Identities=16% Similarity=0.180 Sum_probs=97.2
Q ss_pred CceEEEEee---------C-CeEEEEEecCC----CceecCCCceE---EEE-EeCCCEEEEEEeCCeEEEEEEcCCCCC
Q psy14552 86 QRQIVIALQ---------G-GRLIYFEMHPV----SDKKESDKKKI---VRC-AVNQRQIVIALQGGRLIYFEMHPETGI 147 (290)
Q Consensus 86 ~~qv~ial~---------~-g~i~~~~~~~~----~~~~~~~~~~I---i~a-s~~~~~l~Val~~~~i~~l~l~~~~~~ 147 (290)
.++++|.++ . |+|+.|++... .++......++ +.| +.-+.++++| .++.|++++++.+ ..
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~~~lv~~-~g~~l~v~~l~~~-~~ 119 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFNGRLVVA-VGNKLYVYDLDNS-KT 119 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEETTEEEEE-ETTEEEEEEEETT-SS
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhCCEEEEe-ecCEEEEEEccCc-cc
Confidence 366666655 2 99999999763 23332111112 333 3335566666 5889999999973 22
Q ss_pred ceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC-ceeEeeEEecCCcceEEEEEEecCCCCCC
Q psy14552 148 LDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD-CLKQKNLQGLPDLAESLVMIEMGASDPTS 226 (290)
Q Consensus 148 l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~-~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~ 226 (290)
+... .....+.-++++... ..+++||.--..+.++.+++.. .|..+++.. .|..+.-+.+-.
T Consensus 120 l~~~-~~~~~~~~i~sl~~~--------~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~---~~~~v~~~~~l~----- 182 (321)
T PF03178_consen 120 LLKK-AFYDSPFYITSLSVF--------KNYILVGDAMKSVSLLRYDEENNKLILVARDY---QPRWVTAAEFLV----- 182 (321)
T ss_dssp EEEE-EEE-BSSSEEEEEEE--------TTEEEEEESSSSEEEEEEETTTE-EEEEEEES---S-BEEEEEEEE------
T ss_pred chhh-heecceEEEEEEecc--------ccEEEEEEcccCEEEEEEEccCCEEEEEEecC---CCccEEEEEEec-----
Confidence 4332 233344445444432 4599999986666777776543 466665433 366665555421
Q ss_pred CCCCCCCccCCceEEEEEecCceEEEEEEeCCCC-------cccccceEEecCcceEEEEEE
Q psy14552 227 SDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG-------DLSDNRMRYLGSRPVKLFKIR 281 (290)
Q Consensus 227 ~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~-------~l~~~~~~~lG~~pv~l~~~~ 281 (290)
++. .+++|=++|.+.-|..++... .|......++|....++.+..
T Consensus 183 ---------d~~-~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~ 234 (321)
T PF03178_consen 183 ---------DED-TIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGS 234 (321)
T ss_dssp ---------SSS-EEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--
T ss_pred ---------CCc-EEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEE
Confidence 223 799999999999999875322 344456778999998886655
No 10
>KOG2110|consensus
Probab=97.44 E-value=0.11 Score=49.30 Aligned_cols=210 Identities=15% Similarity=0.165 Sum_probs=115.0
Q ss_pred eEEEEeeCCCeEEEEecCCeEEEeec--CcceeeeccCCCCCceEEEEeecCc--eEEEE--eeCCeEEEEEecCCCcee
Q psy14552 37 TLCCSAMGDNSIVQVYPDGIRHIGAK--NTTWKVSDKKESDKKKIVRCAVNQR--QIVIA--LQGGRLIYFEMHPVSDKK 110 (290)
Q Consensus 37 Ti~~~~~~~~~ivQVt~~~v~l~~~~--~~~~~~~~~~~~~~~~Iv~as~n~~--qv~ia--l~~g~i~~~~~~~~~~~~ 110 (290)
.|.+-.|...++|=+-++.|-++|.+ +...+| +..||..+.+.+-|.|.. |++.- ...|+|+.|.... +.
T Consensus 89 ~IL~VrmNr~RLvV~Lee~IyIydI~~MklLhTI-~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~n---l~ 164 (391)
T KOG2110|consen 89 SILAVRMNRKRLVVCLEESIYIYDIKDMKLLHTI-ETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTIN---LQ 164 (391)
T ss_pred ceEEEEEccceEEEEEcccEEEEecccceeehhh-hccCCCccceEeeccCCCCceEEecCCCCCceEEEEEccc---ce
Confidence 44555555556666666666666543 111111 122466666666666654 55432 3347888776432 22
Q ss_pred cC----CCceEEEE-E--eCCCEEEEEEeCCe-EEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEE
Q psy14552 111 ES----DKKKIVRC-A--VNQRQIVIALQGGR-LIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182 (290)
Q Consensus 111 ~~----~~~~Ii~a-s--~~~~~l~Val~~~~-i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VG 182 (290)
+. .+..=++| + .++..+|-|...|+ ||+|.+++ ...+.|+ .+=..|..|..++|.+. ..||.+.
T Consensus 165 ~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~-G~kl~eF-RRG~~~~~IySL~Fs~d------s~~L~~s 236 (391)
T KOG2110|consen 165 PVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPE-GQKLYEF-RRGTYPVSIYSLSFSPD------SQFLAAS 236 (391)
T ss_pred eeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCC-ccEeeee-eCCceeeEEEEEEECCC------CCeEEEe
Confidence 21 22222555 4 44666888766554 68999876 2235454 22235788888888753 5799999
Q ss_pred eCCCeEEEEEeCCCC--cee----------EeeEE---ecC-------CcceEEEEEEecCCCCCCCCCCCCCccCCceE
Q psy14552 183 LADNTVRLISLAPQD--CLK----------QKNLQ---GLP-------DLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240 (290)
Q Consensus 183 l~dg~v~i~~l~~~~--~l~----------~~~~~---~L~-------~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
...++|++|+|+... ..+ ...+. .++ ++-|+.+-.++...+-.. + -.-.......+
T Consensus 237 S~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~-~-~~l~~~~~~~~ 314 (391)
T KOG2110|consen 237 SNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKN-I-CSLSSIQKIPR 314 (391)
T ss_pred cCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccc-e-EEeeccCCCCE
Confidence 999999999997421 110 01100 111 112444444432221000 0 00000124567
Q ss_pred EEEEecCceEEEEEEeCCCC
Q psy14552 241 LYVGLQNGALLRMVVDQTSG 260 (290)
Q Consensus 241 L~iGl~dG~l~~~~~d~~~~ 260 (290)
+.|+.-||+++.|++++.+|
T Consensus 315 v~vas~dG~~y~y~l~~~~g 334 (391)
T KOG2110|consen 315 VLVASYDGHLYSYRLPPKEG 334 (391)
T ss_pred EEEEEcCCeEEEEEcCCCCC
Confidence 99999999999999998644
No 11
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.03 E-value=0.3 Score=46.03 Aligned_cols=220 Identities=16% Similarity=0.240 Sum_probs=123.6
Q ss_pred CccCCCCeEEEEeeCCCe--EEEEecCC-eEEEeecCcceeeeccCC----CCCceEEEEee--cCceEEEEeeC-CeEE
Q psy14552 30 GFYGTTPTLCCSAMGDNS--IVQVYPDG-IRHIGAKNTTWKVSDKKE----SDKKKIVRCAV--NQRQIVIALQG-GRLI 99 (290)
Q Consensus 30 gf~~~~~Ti~~~~~~~~~--ivQVt~~~-v~l~~~~~~~~~~~~~~~----~~~~~Iv~as~--n~~qv~ial~~-g~i~ 99 (290)
.+..+...|++++..+|. ++.+.+.+ +.... +.+......| ..+.+.=.+.. ..+++.++-.+ .+|.
T Consensus 93 ~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~---~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~ 169 (345)
T PF10282_consen 93 AVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVV---QTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVY 169 (345)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSEEEEEE---EEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEE
T ss_pred EEecCCCEEEEEEccCCeEEEEEccCCcccceee---eecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEE
Confidence 344678899999988885 56666543 22210 0111000001 12222222222 24455554333 4566
Q ss_pred EEEecCCC-ceec------C--CCceEEEEEeCCCEEEEEE-eCCeEEEEEEcCCCCCceeeeeeee-cCc------cee
Q psy14552 100 YFEMHPVS-DKKE------S--DKKKIVRCAVNQRQIVIAL-QGGRLIYFEMHPETGILDECSETIQ-MES------EVL 162 (290)
Q Consensus 100 ~~~~~~~~-~~~~------~--~~~~Ii~as~~~~~l~Val-~~~~i~~l~l~~~~~~l~~~~~~~~-l~~------ei~ 162 (290)
.|.++... .+.+ + .+-+-++-+.++..+.|.. .+++|..+++++..+.+... +... +|. ..+
T Consensus 170 ~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 248 (345)
T PF10282_consen 170 VYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEI-QTISTLPEGFTGENAPA 248 (345)
T ss_dssp EEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE-EEEESCETTSCSSSSEE
T ss_pred EEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEE-EEeeeccccccccCCce
Confidence 66665432 2322 1 1122233345566666655 37899999998434555443 2232 221 344
Q ss_pred EEEeeeCCCCCccccEEEEEeC-CCeEEEEEeCCC-CceeEeeEEec-CCcceEEEEEEecCCCCCCCCCCCCCccCCce
Q psy14552 163 CMALSNAPSGEQMSRFLAVGLA-DNTVRLISLAPQ-DCLKQKNLQGL-PDLAESLVMIEMGASDPTSSDEPAGPVTLGNL 239 (290)
Q Consensus 163 ~l~i~~~~~~~~~~~~l~VGl~-dg~v~i~~l~~~-~~l~~~~~~~L-~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (290)
-+.+.+. ..||.|+.. +++|.+|.+++. +.|+.+..... +..|+.+.+.. .++
T Consensus 249 ~i~ispd------g~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~-----------------~g~- 304 (345)
T PF10282_consen 249 EIAISPD------GRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSP-----------------DGR- 304 (345)
T ss_dssp EEEE-TT------SSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-T-----------------TSS-
T ss_pred eEEEecC------CCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeC-----------------CCC-
Confidence 5555432 478999885 889999999654 56887766665 56799998853 334
Q ss_pred EEEEEe-cCceEEEEEEeCCCCcccccceEEecCcceEE
Q psy14552 240 YLYVGL-QNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277 (290)
Q Consensus 240 ~L~iGl-~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l 277 (290)
+|+++- .++.+..|++|..+|.|.......-...|+-+
T Consensus 305 ~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci 343 (345)
T PF10282_consen 305 YLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCI 343 (345)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEE
T ss_pred EEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEE
Confidence 577765 67788889999999998765444455555543
No 12
>KOG0318|consensus
Probab=96.86 E-value=0.28 Score=48.55 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=71.2
Q ss_pred CCceEEEEeecCc-eEEEEeeCCeEEEEE-ecCCCceecCCCceE--EEEEeCCCEEEEEEeCCeEEEEEEcCCCCCcee
Q psy14552 75 DKKKIVRCAVNQR-QIVIALQGGRLIYFE-MHPVSDKKESDKKKI--VRCAVNQRQIVIALQGGRLIYFEMHPETGILDE 150 (290)
Q Consensus 75 ~~~~Iv~as~n~~-qv~ial~~g~i~~~~-~~~~~~~~~~~~~~I--i~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~ 150 (290)
..++...|..++. .+++++ .++|+.+. ...... .|-+-+- +|.+..++.++||..|+.+++++|.. +.+.+
T Consensus 405 g~QP~~lav~~d~~~avv~~-~~~iv~l~~~~~~~~--~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g--~~l~e 479 (603)
T KOG0318|consen 405 GSQPKGLAVLSDGGTAVVAC-ISDIVLLQDQTKVSS--IPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSG--DELKE 479 (603)
T ss_pred CCCceeEEEcCCCCEEEEEe-cCcEEEEecCCccee--eccccccceEEEcCCCCEEEEecccceEEEEEecC--Ccccc
Confidence 4556666666664 555555 44555554 211111 1111111 22245567799999999999999986 23434
Q ss_pred eeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 151 CSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 151 ~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
..+....+.+|+++++.|. ..||++|-.++.+..|++..
T Consensus 480 e~~~~~h~a~iT~vaySpd------~~yla~~Da~rkvv~yd~~s 518 (603)
T KOG0318|consen 480 EAKLLEHRAAITDVAYSPD------GAYLAAGDASRKVVLYDVAS 518 (603)
T ss_pred eeeeecccCCceEEEECCC------CcEEEEeccCCcEEEEEccc
Confidence 3334567889999999764 57999999999999999864
No 13
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.73 E-value=0.49 Score=44.72 Aligned_cols=135 Identities=16% Similarity=0.206 Sum_probs=88.1
Q ss_pred EEEEeCCCEEEEEEe-CCeEEEEEEcCCCCCceeeeeee-ecC------cceeEEEeeeCCCCCccccEEEEEeC-CCeE
Q psy14552 118 VRCAVNQRQIVIALQ-GGRLIYFEMHPETGILDECSETI-QME------SEVLCMALSNAPSGEQMSRFLAVGLA-DNTV 188 (290)
Q Consensus 118 i~as~~~~~l~Val~-~~~i~~l~l~~~~~~l~~~~~~~-~l~------~ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v 188 (290)
++-..|+..+-+-+. +++|.+++.++..+.+.++. .+ .+| +.-+.+.+.+ ...||.+.-. ..+|
T Consensus 196 i~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ-~i~tlP~dF~g~~~~aaIhis~------dGrFLYasNRg~dsI 268 (346)
T COG2706 196 IVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQ-TIDTLPEDFTGTNWAAAIHISP------DGRFLYASNRGHDSI 268 (346)
T ss_pred EEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEee-eeccCccccCCCCceeEEEECC------CCCEEEEecCCCCeE
Confidence 444455555444433 88899999887435565542 22 222 3344455542 2478888763 5589
Q ss_pred EEEEeCCCC-ceeEeeEEecCCc-ceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCc-eEEEEEEeCCCCccccc
Q psy14552 189 RLISLAPQD-CLKQKNLQGLPDL-AESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNG-ALLRMVVDQTSGDLSDN 265 (290)
Q Consensus 189 ~i~~l~~~~-~l~~~~~~~L~~~-p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG-~l~~~~~d~~~~~l~~~ 265 (290)
..|++++.+ .|+.+.......+ ||..-+.. ...+|.+...++ .+..|.+|+.+|.|+..
T Consensus 269 ~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~------------------~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~ 330 (346)
T COG2706 269 AVFSVDPDGGKLELVGITPTEGQFPRDFNINP------------------SGRFLIAANQKSDNITVFERDKETGRLTLL 330 (346)
T ss_pred EEEEEcCCCCEEEEEEEeccCCcCCccceeCC------------------CCCEEEEEccCCCcEEEEEEcCCCceEEec
Confidence 999999875 4777766665554 99886663 233477776665 55669999999999876
Q ss_pred ceEEecCcceEE
Q psy14552 266 RMRYLGSRPVKL 277 (290)
Q Consensus 266 ~~~~lG~~pv~l 277 (290)
....-+..||=+
T Consensus 331 ~~~~~~p~Pvcv 342 (346)
T COG2706 331 GRYAVVPEPVCV 342 (346)
T ss_pred ccccCCCCcEEE
Confidence 666778888765
No 14
>KOG0306|consensus
Probab=96.66 E-value=0.067 Score=54.85 Aligned_cols=139 Identities=22% Similarity=0.369 Sum_probs=88.6
Q ss_pred eEEEEecCCeEEEeecCcceeeeccCC-------CCCceEEEEeec---CceEEEEeeCCeEEEEEecCCCceec--CCC
Q psy14552 47 SIVQVYPDGIRHIGAKNTTWKVSDKKE-------SDKKKIVRCAVN---QRQIVIALQGGRLIYFEMHPVSDKKE--SDK 114 (290)
Q Consensus 47 ~ivQVt~~~v~l~~~~~~~~~~~~~~~-------~~~~~Iv~as~n---~~qv~ial~~g~i~~~~~~~~~~~~~--~~~ 114 (290)
.-+-|+.+++.+.........+|+.+. +.+ ++.|+.- |+||++...+|++-.|.+... ++.+ +.+
T Consensus 377 Rsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~-~l~Eti~AH 453 (888)
T KOG0306|consen 377 RSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASA-SLVETIRAH 453 (888)
T ss_pred eEEEeecCceeeeecCCCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehh-hhhhhhhcc
Confidence 355666777776666555666777663 233 3333332 999999999999999988632 2222 111
Q ss_pred c-eE--EEEEeCCCEEEEEEeCCeEEEEEEc--C-CCCC------ceeeeeeeecCcceeEEEeeeCCCCCccccEEEEE
Q psy14552 115 K-KI--VRCAVNQRQIVIALQGGRLIYFEMH--P-ETGI------LDECSETIQMESEVLCMALSNAPSGEQMSRFLAVG 182 (290)
Q Consensus 115 ~-~I--i~as~~~~~l~Val~~~~i~~l~l~--~-~~~~------l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VG 182 (290)
- .| ++-..++..++.|..|.++.+.... . ..+. +.+ ..+++++.+++|+++.|. ..||+||
T Consensus 454 dgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~-~rtLel~ddvL~v~~Spd------gk~LaVs 526 (888)
T KOG0306|consen 454 DGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKH-TRTLELEDDVLCVSVSPD------GKLLAVS 526 (888)
T ss_pred ccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeecc-ceEEeccccEEEEEEcCC------CcEEEEE
Confidence 1 12 2223444557777778888764322 1 0011 111 134569999999999864 5899999
Q ss_pred eCCCeEEEEEeCC
Q psy14552 183 LADNTVRLISLAP 195 (290)
Q Consensus 183 l~dg~v~i~~l~~ 195 (290)
+-|+++.+|.+|.
T Consensus 527 LLdnTVkVyflDt 539 (888)
T KOG0306|consen 527 LLDNTVKVYFLDT 539 (888)
T ss_pred eccCeEEEEEecc
Confidence 9999999999984
No 15
>KOG0291|consensus
Probab=96.64 E-value=1 Score=46.51 Aligned_cols=155 Identities=14% Similarity=0.193 Sum_probs=100.1
Q ss_pred ccCCCCCceEEEEeecCceEEEEeeCCeEEEEEecCCC---ceecCCCceEEEEEeC--CCEEEEEEe-CCeEEEEEEcC
Q psy14552 70 DKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVS---DKKESDKKKIVRCAVN--QRQIVIALQ-GGRLIYFEMHP 143 (290)
Q Consensus 70 ~~~~~~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~---~~~~~~~~~Ii~as~~--~~~l~Val~-~~~i~~l~l~~ 143 (290)
+-++-.+.+.++-+.+++-++-+.-+|++-.+.+...- .+..|+.++..+-+.+ +.-++.|.. ...|.+.++..
T Consensus 388 FteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT 467 (893)
T KOG0291|consen 388 FTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT 467 (893)
T ss_pred eccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec
Confidence 33456788888899999999999999999877664322 3444777766444444 444443433 44777778764
Q ss_pred CCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC-CCceeEeeEEecCCcceEEEEEEecCC
Q psy14552 144 ETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP-QDCLKQKNLQGLPDLAESLVMIEMGAS 222 (290)
Q Consensus 144 ~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~-~~~l~~~~~~~L~~~p~Sl~~~~~~~~ 222 (290)
|+|-+++.- -+.-|++++|.+. ...|+-|.||.+|++|.+=. .+..+.+. ++..++-+.|.++
T Consensus 468 --GqllDiLsG--HEgPVs~l~f~~~------~~~LaS~SWDkTVRiW~if~s~~~vEtl~------i~sdvl~vsfrPd 531 (893)
T KOG0291|consen 468 --GQLLDILSG--HEGPVSGLSFSPD------GSLLASGSWDKTVRIWDIFSSSGTVETLE------IRSDVLAVSFRPD 531 (893)
T ss_pred --CeeeehhcC--CCCcceeeEEccc------cCeEEeccccceEEEEEeeccCceeeeEe------eccceeEEEEcCC
Confidence 766565432 3456788888653 35899999999999999732 22333332 3344444554322
Q ss_pred CCCCCCCCCCCccCCceEEEEEecCceEEEEEE
Q psy14552 223 DPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
+.- |-+++-||.+--|..
T Consensus 532 --------------G~e-laVaTldgqItf~d~ 549 (893)
T KOG0291|consen 532 --------------GKE-LAVATLDGQITFFDI 549 (893)
T ss_pred --------------CCe-EEEEEecceEEEEEh
Confidence 232 888999999888875
No 16
>KOG2111|consensus
Probab=96.63 E-value=0.61 Score=43.64 Aligned_cols=145 Identities=17% Similarity=0.278 Sum_probs=79.7
Q ss_pred EeeCCCeEEEEecCCeEEEeec---CcceeeeccCCCCCceEEEEeecCceEEEEeeC---CeEEEEEecCCC---ceec
Q psy14552 41 SAMGDNSIVQVYPDGIRHIGAK---NTTWKVSDKKESDKKKIVRCAVNQRQIVIALQG---GRLIYFEMHPVS---DKKE 111 (290)
Q Consensus 41 ~~~~~~~ivQVt~~~v~l~~~~---~~~~~~~~~~~~~~~~Iv~as~n~~qv~ial~~---g~i~~~~~~~~~---~~~~ 111 (290)
-.+..+.||=|.++.|-++... ++...+-...-|.| ..+..-...--++|+.+ |+|=...+.... ....
T Consensus 100 V~l~r~riVvvl~~~I~VytF~~n~k~l~~~et~~NPkG--lC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I 177 (346)
T KOG2111|consen 100 VKLRRDRIVVVLENKIYVYTFPDNPKLLHVIETRSNPKG--LCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSII 177 (346)
T ss_pred EEEcCCeEEEEecCeEEEEEcCCChhheeeeecccCCCc--eEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEE
Confidence 3456678899999988887644 22222222222555 22222224445566666 443322221100 0011
Q ss_pred CCCceEEEE-EeC--CCEEEEEEeCCe-EEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCe
Q psy14552 112 SDKKKIVRC-AVN--QRQIVIALQGGR-LIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNT 187 (290)
Q Consensus 112 ~~~~~Ii~a-s~~--~~~l~Val~~~~-i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~ 187 (290)
+.+..-|+| +-| +..+|-|...|+ ||+|.-.. ...+.|. .+=.-+-+|-||+|.+. +.+|+|...-|+
T Consensus 178 ~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~-g~~l~E~-RRG~d~A~iy~iaFSp~------~s~LavsSdKgT 249 (346)
T KOG2111|consen 178 NAHDSDIACVALNLQGTLVATASTKGTLIRIFDTED-GTLLQEL-RRGVDRADIYCIAFSPN------SSWLAVSSDKGT 249 (346)
T ss_pred EcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCC-CcEeeee-ecCCchheEEEEEeCCC------ccEEEEEcCCCe
Confidence 122222666 544 344555555554 67887554 1234443 22234678999999753 789999999999
Q ss_pred EEEEEeCC
Q psy14552 188 VRLISLAP 195 (290)
Q Consensus 188 v~i~~l~~ 195 (290)
+++|.+.+
T Consensus 250 lHiF~l~~ 257 (346)
T KOG2111|consen 250 LHIFSLRD 257 (346)
T ss_pred EEEEEeec
Confidence 99999964
No 17
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.41 E-value=0.26 Score=44.40 Aligned_cols=145 Identities=17% Similarity=0.276 Sum_probs=83.4
Q ss_pred EEeecCceEEEEeeCCeEEEEEecCCCceecC-CCceEEEEEeCC-CEEEEEEeCCeEEEEEEcCCCCCcee---ee--e
Q psy14552 81 RCAVNQRQIVIALQGGRLIYFEMHPVSDKKES-DKKKIVRCAVNQ-RQIVIALQGGRLIYFEMHPETGILDE---CS--E 153 (290)
Q Consensus 81 ~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~-~~~~Ii~as~~~-~~l~Val~~~~i~~l~l~~~~~~l~~---~~--~ 153 (290)
++...+..+++++++| |++++......|... ....|.-...-. -.+++.++|+.++++.++.- ..... .. +
T Consensus 2 c~~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l-~~~~~~~~~~~~~ 79 (275)
T PF00780_consen 2 CADSWGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLSDGQLYVYDLDSL-EPVSTSAPLAFPK 79 (275)
T ss_pred CcccCCCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEcCCccEEEEchhh-ccccccccccccc
Confidence 4555678899999998 776776333444441 222243333332 23566677899999887741 00000 00 0
Q ss_pred ------eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC-Cce-eEeeEEecCCcceEEEEEEecCCCCC
Q psy14552 154 ------TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ-DCL-KQKNLQGLPDLAESLVMIEMGASDPT 225 (290)
Q Consensus 154 ------~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~-~~l-~~~~~~~L~~~p~Sl~~~~~~~~~~~ 225 (290)
.......+.+.+... +.....+|+|+... .+.+|.+... ..+ ...++..++..|.++....
T Consensus 80 ~~~~~~~~~~~~~v~~f~~~~---~~~~~~~L~va~kk-~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~~------- 148 (275)
T PF00780_consen 80 SRSLPTKLPETKGVSFFAVNG---GHEGSRRLCVAVKK-KILIYEWNDPRNSFSKLLKEISLPDPPSSIAFLG------- 148 (275)
T ss_pred cccccccccccCCeeEEeecc---ccccceEEEEEECC-EEEEEEEECCcccccceeEEEEcCCCcEEEEEeC-------
Confidence 111122333333111 12246788888865 7888888653 334 5667778888999888773
Q ss_pred CCCCCCCCccCCceEEEEEecCceEE
Q psy14552 226 SSDEPAGPVTLGNLYLYVGLQNGALL 251 (290)
Q Consensus 226 ~~~~~~~~~~~~~~~L~iGl~dG~l~ 251 (290)
..+.+|+++|+.+
T Consensus 149 -------------~~i~v~~~~~f~~ 161 (275)
T PF00780_consen 149 -------------NKICVGTSKGFYL 161 (275)
T ss_pred -------------CEEEEEeCCceEE
Confidence 2488999888543
No 18
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=96.26 E-value=0.62 Score=39.64 Aligned_cols=148 Identities=12% Similarity=0.193 Sum_probs=81.0
Q ss_pred eEEEEeecC--ceEEEEeeCCeEEEEEecCCCce-ecC-CCceEEEE--EeCCCEEEEEEeCCeEEEEEEcCCCCCceee
Q psy14552 78 KIVRCAVNQ--RQIVIALQGGRLIYFEMHPVSDK-KES-DKKKIVRC--AVNQRQIVIALQGGRLIYFEMHPETGILDEC 151 (290)
Q Consensus 78 ~Iv~as~n~--~qv~ial~~g~i~~~~~~~~~~~-~~~-~~~~Ii~a--s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~ 151 (290)
+|.+.+.++ +.++.+..+|.+..+.+...... ... ....+..+ ..++..++++..++.+.++.+... ..+
T Consensus 11 ~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~-~~~--- 86 (289)
T cd00200 11 GVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG-ECV--- 86 (289)
T ss_pred CEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc-cce---
Confidence 455555553 55666666788887777543211 111 11223233 334456788877999999988751 111
Q ss_pred eeee-ecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCC
Q psy14552 152 SETI-QMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230 (290)
Q Consensus 152 ~~~~-~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~ 230 (290)
... ..+..+.++.+.+. ..++++|..||.+.+|.+.......... .....+.++...
T Consensus 87 -~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~~~~------------- 144 (289)
T cd00200 87 -RTLTGHTSYVSSVAFSPD------GRILSSSSRDKTIKVWDVETGKCLTTLR--GHTDWVNSVAFS------------- 144 (289)
T ss_pred -EEEeccCCcEEEEEEcCC------CCEEEEecCCCeEEEEECCCcEEEEEec--cCCCcEEEEEEc-------------
Confidence 122 23446888887532 3567777779999999986322222111 111122233222
Q ss_pred CCCccCCceEEEEEecCceEEEEEEe
Q psy14552 231 AGPVTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 231 ~~~~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
....+++.|..||.+.-|.+.
T Consensus 145 -----~~~~~l~~~~~~~~i~i~d~~ 165 (289)
T cd00200 145 -----PDGTFVASSSQDGTIKLWDLR 165 (289)
T ss_pred -----CcCCEEEEEcCCCcEEEEEcc
Confidence 113457777779988887664
No 19
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.13 E-value=0.21 Score=48.44 Aligned_cols=180 Identities=16% Similarity=0.214 Sum_probs=81.2
Q ss_pred EEEEee--cCceEEEEeeCCeEEEEEecCCCcee---cCCCceEEEEEeCCCEEEEEEe--CCeEEEEEEcCCCCCceee
Q psy14552 79 IVRCAV--NQRQIVIALQGGRLIYFEMHPVSDKK---ESDKKKIVRCAVNQRQIVIALQ--GGRLIYFEMHPETGILDEC 151 (290)
Q Consensus 79 Iv~as~--n~~qv~ial~~g~i~~~~~~~~~~~~---~~~~~~Ii~as~~~~~l~Val~--~~~i~~l~l~~~~~~l~~~ 151 (290)
|...|+ ....+++++..|+++.|......... .+....+--| -+... .+.|.=++-.. ...+.+-
T Consensus 4 v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~di~~r~-~~~~~~g 75 (395)
T PF08596_consen 4 VTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFR-------RFSLNNSPGKLTDISDRA-PPSLKEG 75 (395)
T ss_dssp EEEEEEETTTTEEEEEETTS-EEEEEEEE-------------------------S--GGGSS-SEEE-GGG---TT-SEE
T ss_pred EEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccc-------cccccCCCcceEEehhhC-Ccccccc
Confidence 444444 47899999999999999886543221 0111111111 00000 11111111000 0122222
Q ss_pred eeeee----cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeE--eeEEecC----CcceEEEEEEecC
Q psy14552 152 SETIQ----MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQ--KNLQGLP----DLAESLVMIEMGA 221 (290)
Q Consensus 152 ~~~~~----l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~--~~~~~L~----~~p~Sl~~~~~~~ 221 (290)
+.+.. ....|+++++.+ .-|++||..+|.+.++.+-...-+.. ++...++ ..+.++...-|.-
T Consensus 76 f~P~~l~~~~~g~vtal~~S~-------iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~ 148 (395)
T PF08596_consen 76 FLPLTLLDAKQGPVTALKNSD-------IGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTL 148 (395)
T ss_dssp EEEEEEE---S-SEEEEEE-B-------TSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-
T ss_pred cCchhheeccCCcEeEEecCC-------CcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEec
Confidence 22221 257888888863 46999999999999988843221111 1110011 2455554444421
Q ss_pred CCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCC-Ccccc---cceEEecCcceEEEEEEeC
Q psy14552 222 SDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTS-GDLSD---NRMRYLGSRPVKLFKIRCQ 283 (290)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~-~~l~~---~~~~~lG~~pv~l~~~~~~ 283 (290)
.+ .......|+||+..|.++.|++.+.+ +..+- ..........+.+.++...
T Consensus 149 ~~----------D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~ 204 (395)
T PF08596_consen 149 GG----------DGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINAD 204 (395)
T ss_dssp TT----------SSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETT
T ss_pred CC----------CcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECC
Confidence 11 01345789999999999999997633 32211 0112344555667777543
No 20
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.09 E-value=1.2 Score=41.36 Aligned_cols=161 Identities=12% Similarity=0.101 Sum_probs=96.6
Q ss_pred EEEEeecCceEEEEeeCCeEEEEEecCCCceecCC----CceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeee
Q psy14552 79 IVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESD----KKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSET 154 (290)
Q Consensus 79 Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~~----~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~ 154 (290)
+.+....+.+ +++..|+.|..++++....|.+.. ..-+++.+..++.++||..-..+.++..+++..+|..+ .+
T Consensus 91 V~ai~~~~~~-lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~v-a~ 168 (321)
T PF03178_consen 91 VTAICSFNGR-LVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILV-AR 168 (321)
T ss_dssp EEEEEEETTE-EEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEE-EE
T ss_pred ceEhhhhCCE-EEEeecCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEE-Ee
Confidence 4455555666 555568999999987654355421 11223335557789999777788888887632346554 33
Q ss_pred eecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC-------C-ceeEeeEEecCCcceEEEEEEecCCCCCC
Q psy14552 155 IQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ-------D-CLKQKNLQGLPDLAESLVMIEMGASDPTS 226 (290)
Q Consensus 155 ~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~-------~-~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~ 226 (290)
-..|..++++.+-.. . ..++++-.+|.+.+++.++. . .|..+....++..+.++.-..+....
T Consensus 169 d~~~~~v~~~~~l~d-----~-~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~--- 239 (321)
T PF03178_consen 169 DYQPRWVTAAEFLVD-----E-DTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRS--- 239 (321)
T ss_dssp ESS-BEEEEEEEE-S-----S-SEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--S---
T ss_pred cCCCccEEEEEEecC-----C-cEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecC---
Confidence 345777877776521 2 37888888999999998752 1 47777778889888888555542210
Q ss_pred CCCCCCCccCCceEEEEEecCceEEEEE
Q psy14552 227 SDEPAGPVTLGNLYLYVGLQNGALLRMV 254 (290)
Q Consensus 227 ~~~~~~~~~~~~~~L~iGl~dG~l~~~~ 254 (290)
++........++.|+.+|.+..+.
T Consensus 240 ----~~~~~~~~~~i~~~T~~G~Ig~l~ 263 (321)
T PF03178_consen 240 ----GSSESPNRPQILYGTVDGSIGVLI 263 (321)
T ss_dssp ----SSS-TTEEEEEEEEETTS-EEEEE
T ss_pred ----CCCcccccceEEEEecCCEEEEEE
Confidence 000111246799999999998654
No 21
>KOG0318|consensus
Probab=96.02 E-value=1 Score=44.77 Aligned_cols=157 Identities=16% Similarity=0.156 Sum_probs=90.4
Q ss_pred CCceEEEEeec--CceEEEEeeCCeEEEEEecCC--CceecCCCceEEEE-EeCC-CEEEEEEeCCeEEEEEEcCCCCC-
Q psy14552 75 DKKKIVRCAVN--QRQIVIALQGGRLIYFEMHPV--SDKKESDKKKIVRC-AVNQ-RQIVIALQGGRLIYFEMHPETGI- 147 (290)
Q Consensus 75 ~~~~Iv~as~n--~~qv~ial~~g~i~~~~~~~~--~~~~~~~~~~Ii~a-s~~~-~~l~Val~~~~i~~l~l~~~~~~- 147 (290)
-.+.|.+.+.+ ..++.-+--+|.|.+-..... ..+.+..+-..|.+ +... .++.-..||.+|+++.+..+ +.
T Consensus 319 HnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~-~~t 397 (603)
T KOG0318|consen 319 HNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDN-GYT 397 (603)
T ss_pred cccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccC-ccc
Confidence 34567777766 466777777788877665432 22332334444555 3333 33444447888888866431 10
Q ss_pred ceee-----------------------------ee------eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEE
Q psy14552 148 LDEC-----------------------------SE------TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLIS 192 (290)
Q Consensus 148 l~~~-----------------------------~~------~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~ 192 (290)
=.+. ++ ..++..+++|+++.+ ...+++||..||.|++|+
T Consensus 398 ~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~------~~~~vaVGG~Dgkvhvys 471 (603)
T KOG0318|consen 398 KSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSP------DGSEVAVGGQDGKVHVYS 471 (603)
T ss_pred ccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcC------CCCEEEEecccceEEEEE
Confidence 0000 00 011334444444443 247899999999999999
Q ss_pred eCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEe
Q psy14552 193 LAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 193 l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
|......+..++....+.+..+... ....||-+|=.++.++-|.+.
T Consensus 472 l~g~~l~ee~~~~~h~a~iT~vayS------------------pd~~yla~~Da~rkvv~yd~~ 517 (603)
T KOG0318|consen 472 LSGDELKEEAKLLEHRAAITDVAYS------------------PDGAYLAAGDASRKVVLYDVA 517 (603)
T ss_pred ecCCcccceeeeecccCCceEEEEC------------------CCCcEEEEeccCCcEEEEEcc
Confidence 9765433333333434444444433 345689999999999999764
No 22
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=95.61 E-value=1.9 Score=39.92 Aligned_cols=215 Identities=11% Similarity=0.057 Sum_probs=105.9
Q ss_pred CccCCCCeEEEEeeCCCeE--EEEecCC-eEEEeecCcceeeeccCCCCCceEEEEeecCceEEEEe-eCCeEEEEEecC
Q psy14552 30 GFYGTTPTLCCSAMGDNSI--VQVYPDG-IRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIAL-QGGRLIYFEMHP 105 (290)
Q Consensus 30 gf~~~~~Ti~~~~~~~~~i--vQVt~~~-v~l~~~~~~~~~~~~~~~~~~~~Iv~as~n~~qv~ial-~~g~i~~~~~~~ 105 (290)
.|.++.+.|+++...++.| .++.+++ +..... .+.+....-+..+-+++++.++. .+|.+..+.++.
T Consensus 41 ~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~---------~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~ 111 (330)
T PRK11028 41 VISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAE---------SPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDK 111 (330)
T ss_pred EECCCCCEEEEEECCCCcEEEEEECCCCceEEeee---------ecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECC
Confidence 3566788999987766644 5555332 332211 11111111222233344444443 246666666653
Q ss_pred CCceec-----CC--CceEEEEEeCCCEEEEEE-eCCeEEEEEEcCCCCCceeee---eeeecCcceeEEEeeeCCCCCc
Q psy14552 106 VSDKKE-----SD--KKKIVRCAVNQRQIVIAL-QGGRLIYFEMHPETGILDECS---ETIQMESEVLCMALSNAPSGEQ 174 (290)
Q Consensus 106 ~~~~~~-----~~--~~~Ii~as~~~~~l~Val-~~~~i~~l~l~~~~~~l~~~~---~~~~l~~ei~~l~i~~~~~~~~ 174 (290)
.+.... +. +..-++.+.++..++|+. .++.|.++.++. .+.+.... .+......+-.+.+.+
T Consensus 112 ~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~-~g~l~~~~~~~~~~~~g~~p~~~~~~p------ 184 (330)
T PRK11028 112 DGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD-DGHLVAQEPAEVTTVEGAGPRHMVFHP------ 184 (330)
T ss_pred CCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC-CCcccccCCCceecCCCCCCceEEECC------
Confidence 221110 11 111122245566776665 468999999876 24442210 0112233344455543
Q ss_pred cccEEEEEeC-CCeEEEEEeCCC-CceeEeeEEecCCcceEE------EEEEecCCCCCCCCCCCCCccCCceEEEEEec
Q psy14552 175 MSRFLAVGLA-DNTVRLISLAPQ-DCLKQKNLQGLPDLAESL------VMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQ 246 (290)
Q Consensus 175 ~~~~l~VGl~-dg~v~i~~l~~~-~~l~~~~~~~L~~~p~Sl------~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~ 246 (290)
...+++|..+ ++.+.+|.+++. +.++.+ +.++..|... .-+.+. ....+||++.+
T Consensus 185 dg~~lyv~~~~~~~v~v~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~i~~~---------------pdg~~lyv~~~ 247 (330)
T PRK11028 185 NQQYAYCVNELNSSVDVWQLKDPHGEIECV--QTLDMMPADFSDTRWAADIHIT---------------PDGRHLYACDR 247 (330)
T ss_pred CCCEEEEEecCCCEEEEEEEeCCCCCEEEE--EEEecCCCcCCCCccceeEEEC---------------CCCCEEEEecC
Confidence 2468888886 999999999753 344443 2333222211 011111 12346888865
Q ss_pred -CceEEEEEEeCCCCcccccceEEecCcceEE
Q psy14552 247 -NGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277 (290)
Q Consensus 247 -dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l 277 (290)
++.+.-|.++...+.+.-......|..|-.+
T Consensus 248 ~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~ 279 (330)
T PRK11028 248 TASLISVFSVSEDGSVLSFEGHQPTETQPRGF 279 (330)
T ss_pred CCCeEEEEEEeCCCCeEEEeEEEeccccCCce
Confidence 6778888887655443323334445444443
No 23
>KOG2110|consensus
Probab=95.51 E-value=1.9 Score=41.13 Aligned_cols=152 Identities=14% Similarity=0.248 Sum_probs=94.8
Q ss_pred ceEEEEeecCceEEEEeeCCeEEEEEecC------CCceecCCCceEEEEEeCCCEEEEEE----eCCeEEEEEEcCCCC
Q psy14552 77 KKIVRCAVNQRQIVIALQGGRLIYFEMHP------VSDKKESDKKKIVRCAVNQRQIVIAL----QGGRLIYFEMHPETG 146 (290)
Q Consensus 77 ~~Iv~as~n~~qv~ial~~g~i~~~~~~~------~~~~~~~~~~~Ii~as~~~~~l~Val----~~~~i~~l~l~~~~~ 146 (290)
.+|.++-.|...++++|.+...+ ..+.. ..+|.+ ....+.|-+.|...+.+|. ..+.|++|....
T Consensus 88 t~IL~VrmNr~RLvV~Lee~IyI-ydI~~MklLhTI~t~~~-n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~n--- 162 (391)
T KOG2110|consen 88 TSILAVRMNRKRLVVCLEESIYI-YDIKDMKLLHTIETTPP-NPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTIN--- 162 (391)
T ss_pred CceEEEEEccceEEEEEcccEEE-EecccceeehhhhccCC-CccceEeeccCCCCceEEecCCCCCceEEEEEccc---
Confidence 46999999999999999888333 33321 123322 2222323366655444444 257888887654
Q ss_pred CceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEE-EEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCC
Q psy14552 147 ILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVR-LISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPT 225 (290)
Q Consensus 147 ~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~-i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~ 225 (290)
+......-.-..+++|++|.+. ..+|+-+...|+|. +|.++..+.+...+ =|+.|.+|.-+-|..+
T Consensus 163 -l~~v~~I~aH~~~lAalafs~~------G~llATASeKGTVIRVf~v~~G~kl~eFR---RG~~~~~IySL~Fs~d--- 229 (391)
T KOG2110|consen 163 -LQPVNTINAHKGPLAALAFSPD------GTLLATASEKGTVIRVFSVPEGQKLYEFR---RGTYPVSIYSLSFSPD--- 229 (391)
T ss_pred -ceeeeEEEecCCceeEEEECCC------CCEEEEeccCceEEEEEEcCCccEeeeee---CCceeeEEEEEEECCC---
Confidence 3232211234688999999753 47899999988655 57776444444332 3556777777766433
Q ss_pred CCCCCCCCccCCceEEEEEecCceEEEEEEeCC
Q psy14552 226 SSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQT 258 (290)
Q Consensus 226 ~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~ 258 (290)
..||-+.-..+.+--|+++..
T Consensus 230 ------------s~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 230 ------------SQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred ------------CCeEEEecCCCeEEEEEeccc
Confidence 336888888888888988553
No 24
>PTZ00421 coronin; Provisional
Probab=95.25 E-value=2.5 Score=42.20 Aligned_cols=109 Identities=17% Similarity=0.217 Sum_probs=63.4
Q ss_pred EeecCceEEEEee-CCeEEEEEecCCCceec--C---CC-ceEEEE--Ee-CCCEEEEEEeCCeEEEEEEcCCCCC---c
Q psy14552 82 CAVNQRQIVIALQ-GGRLIYFEMHPVSDKKE--S---DK-KKIVRC--AV-NQRQIVIALQGGRLIYFEMHPETGI---L 148 (290)
Q Consensus 82 as~n~~qv~ial~-~g~i~~~~~~~~~~~~~--~---~~-~~Ii~a--s~-~~~~l~Val~~~~i~~l~l~~~~~~---l 148 (290)
+++|+.++++... .|....+..+..+.... | .+ -.|.+. +. ++..++.|..|++|+++.++.. +. .
T Consensus 36 ~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~-~~~~~~ 114 (493)
T PTZ00421 36 IACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEE-GLTQNI 114 (493)
T ss_pred EeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCC-cccccc
Confidence 5667777777654 23344455444333221 0 11 123222 33 4456888888999999998752 11 0
Q ss_pred eeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC
Q psy14552 149 DECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ 196 (290)
Q Consensus 149 ~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~ 196 (290)
.+.+..+. -...|.++++.+.. ..+|+.|.+|++|.+|.+...
T Consensus 115 ~~~l~~L~gH~~~V~~l~f~P~~-----~~iLaSgs~DgtVrIWDl~tg 158 (493)
T PTZ00421 115 SDPIVHLQGHTKKVGIVSFHPSA-----MNVLASAGADMVVNVWDVERG 158 (493)
T ss_pred CcceEEecCCCCcEEEEEeCcCC-----CCEEEEEeCCCEEEEEECCCC
Confidence 11111111 24578888887532 468999999999999998643
No 25
>KOG1538|consensus
Probab=95.12 E-value=0.84 Score=46.74 Aligned_cols=152 Identities=11% Similarity=0.220 Sum_probs=94.6
Q ss_pred CceEEEEeec--CceEEEEeeCCeEEEEEecC--CCceecCCCce--E--EEEEeC-----CCEEEEEEeCCeEEEEEEc
Q psy14552 76 KKKIVRCAVN--QRQIVIALQGGRLIYFEMHP--VSDKKESDKKK--I--VRCAVN-----QRQIVIALQGGRLIYFEMH 142 (290)
Q Consensus 76 ~~~Iv~as~n--~~qv~ial~~g~i~~~~~~~--~~~~~~~~~~~--I--i~as~~-----~~~l~Val~~~~i~~l~l~ 142 (290)
..++.+||-+ ..|+++-+.+|+|-.-.-.. ...+..|.+.+ | ++|+.+ ...++|.-|+.++.+.+++
T Consensus 132 s~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls 211 (1081)
T KOG1538|consen 132 SSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS 211 (1081)
T ss_pred heeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec
Confidence 4456666654 55677788899886543211 12233333222 3 666322 1238999999999998886
Q ss_pred CCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCC
Q psy14552 143 PETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS 222 (290)
Q Consensus 143 ~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~ 222 (290)
- +. +-+...+..++.|++..+- ..|+++|..|+.+.+|.=+. +....++..-.-+=-+...
T Consensus 212 G---~~--Igk~r~L~FdP~CisYf~N------GEy~LiGGsdk~L~~fTR~G------vrLGTvg~~D~WIWtV~~~-- 272 (1081)
T KOG1538|consen 212 G---KQ--IGKDRALNFDPCCISYFTN------GEYILLGGSDKQLSLFTRDG------VRLGTVGEQDSWIWTVQAK-- 272 (1081)
T ss_pred c---ee--ecccccCCCCchhheeccC------CcEEEEccCCCceEEEeecC------eEEeeccccceeEEEEEEc--
Confidence 4 32 2245678999999998743 57999999999999887542 1112233332333333321
Q ss_pred CCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCC
Q psy14552 223 DPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTS 259 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~ 259 (290)
.+..|.-+|-.||.+.-|.+-..+
T Consensus 273 -------------PNsQ~v~~GCqDGTiACyNl~fST 296 (1081)
T KOG1538|consen 273 -------------PNSQYVVVGCQDGTIACYNLIFST 296 (1081)
T ss_pred -------------cCCceEEEEEccCeeehhhhHHhH
Confidence 234568999999999998875443
No 26
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=95.11 E-value=1.8 Score=36.71 Aligned_cols=140 Identities=13% Similarity=0.170 Sum_probs=75.2
Q ss_pred CceEEEEeeCCeEEEEEecCCCceec-CCC-ceEEEEEe--CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeee-ecCcc
Q psy14552 86 QRQIVIALQGGRLIYFEMHPVSDKKE-SDK-KKIVRCAV--NQRQIVIALQGGRLIYFEMHPETGILDECSETI-QMESE 160 (290)
Q Consensus 86 ~~qv~ial~~g~i~~~~~~~~~~~~~-~~~-~~Ii~as~--~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~-~l~~e 160 (290)
+.+++.+..+|.+..+.+........ ..+ ..+.+... ++..++.+..++.++++.+.. +.. .... ..+..
T Consensus 63 ~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~---~~~~~~~~~~ 137 (289)
T cd00200 63 GTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVET--GKC---LTTLRGHTDW 137 (289)
T ss_pred CCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCC--cEE---EEEeccCCCc
Confidence 34677777788888777654211111 111 12433332 323344444489999988764 211 1112 23456
Q ss_pred eeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceE
Q psy14552 161 VLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240 (290)
Q Consensus 161 i~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
+.++.+.+. ..++++|..||.+.+|.+.....+.... .-.....++... ....+
T Consensus 138 i~~~~~~~~------~~~l~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~------------------~~~~~ 191 (289)
T cd00200 138 VNSVAFSPD------GTFVASSSQDGTIKLWDLRTGKCVATLT--GHTGEVNSVAFS------------------PDGEK 191 (289)
T ss_pred EEEEEEcCc------CCEEEEEcCCCcEEEEEccccccceeEe--cCccccceEEEC------------------CCcCE
Confidence 888888642 4677777779999999986332222221 101122233222 12234
Q ss_pred EEEEecCceEEEEEEe
Q psy14552 241 LYVGLQNGALLRMVVD 256 (290)
Q Consensus 241 L~iGl~dG~l~~~~~d 256 (290)
+++|-.||.+.-|.+.
T Consensus 192 l~~~~~~~~i~i~d~~ 207 (289)
T cd00200 192 LLSSSSDGTIKLWDLS 207 (289)
T ss_pred EEEecCCCcEEEEECC
Confidence 7777778888877653
No 27
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=95.10 E-value=1.2 Score=35.63 Aligned_cols=93 Identities=17% Similarity=0.185 Sum_probs=60.8
Q ss_pred CEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeE
Q psy14552 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNL 204 (290)
Q Consensus 125 ~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~ 204 (290)
+.++||+.|..|++|.=++ +...++....|+++.-. .....+-|+.||+|-+|.-. .-+=.+|
T Consensus 16 ~eLlvGs~D~~IRvf~~~e-------~~~Ei~e~~~v~~L~~~-------~~~~F~Y~l~NGTVGvY~~~--~RlWRiK- 78 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGDE-------IVAEITETDKVTSLCSL-------GGGRFAYALANGTVGVYDRS--QRLWRIK- 78 (111)
T ss_pred ceEEEecCCcEEEEEeCCc-------EEEEEecccceEEEEEc-------CCCEEEEEecCCEEEEEeCc--ceeeeec-
Confidence 4599999999999997433 12233444555544322 23568889999999999631 1121121
Q ss_pred EecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceE
Q psy14552 205 QGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGAL 250 (290)
Q Consensus 205 ~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l 250 (290)
=...|.++....++. ++..-|.+|=.||.+
T Consensus 79 --SK~~~~~~~~~D~~g--------------dG~~eLI~GwsnGkv 108 (111)
T PF14783_consen 79 --SKNQVTSMAFYDING--------------DGVPELIVGWSNGKV 108 (111)
T ss_pred --cCCCeEEEEEEcCCC--------------CCceEEEEEecCCeE
Confidence 123688998888743 466779999999975
No 28
>KOG0647|consensus
Probab=95.08 E-value=0.93 Score=42.24 Aligned_cols=99 Identities=13% Similarity=0.179 Sum_probs=69.4
Q ss_pred EEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC-CCceeEeeEE
Q psy14552 127 IVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP-QDCLKQKNLQ 205 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~-~~~l~~~~~~ 205 (290)
++-|.||.+|.|...... ..+ .++.+|.-+=++++. .+.++||+.+..|.+|+|.. ...+... .-
T Consensus 130 l~TGSWDKTlKfWD~R~~----~pv-~t~~LPeRvYa~Dv~--------~pm~vVata~r~i~vynL~n~~te~k~~-~S 195 (347)
T KOG0647|consen 130 LVTGSWDKTLKFWDTRSS----NPV-ATLQLPERVYAADVL--------YPMAVVATAERHIAVYNLENPPTEFKRI-ES 195 (347)
T ss_pred eEecccccceeecccCCC----Cee-eeeeccceeeehhcc--------CceeEEEecCCcEEEEEcCCCcchhhhh-cC
Confidence 677789999999977652 132 467889988887663 67999999999999999942 2222222 12
Q ss_pred ecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 206 GLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 206 ~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
.|..+-|++++.+ ++..| .+|--+|.+.-..+|.
T Consensus 196 pLk~Q~R~va~f~-----------------d~~~~-alGsiEGrv~iq~id~ 229 (347)
T KOG0647|consen 196 PLKWQTRCVACFQ-----------------DKDGF-ALGSIEGRVAIQYIDD 229 (347)
T ss_pred cccceeeEEEEEe-----------------cCCce-EeeeecceEEEEecCC
Confidence 3666788888876 23333 6777778777777765
No 29
>KOG0283|consensus
Probab=95.07 E-value=0.28 Score=50.49 Aligned_cols=102 Identities=20% Similarity=0.263 Sum_probs=73.7
Q ss_pred CEEEEEE-eCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEee
Q psy14552 125 RQIVIAL-QGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKN 203 (290)
Q Consensus 125 ~~l~Val-~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~ 203 (290)
++++++. .|.++++..+.-+ ++++...-+.=|+|+.|.|.+ ..|.+-|+-||.+++|++.. -+++.
T Consensus 380 n~fLLSSSMDKTVRLWh~~~~-----~CL~~F~HndfVTcVaFnPvD-----DryFiSGSLD~KvRiWsI~d---~~Vv~ 446 (712)
T KOG0283|consen 380 NNFLLSSSMDKTVRLWHPGRK-----ECLKVFSHNDFVTCVAFNPVD-----DRYFISGSLDGKVRLWSISD---KKVVD 446 (712)
T ss_pred CCeeEeccccccEEeecCCCc-----ceeeEEecCCeeEEEEecccC-----CCcEeecccccceEEeecCc---CeeEe
Confidence 3444443 4888988877642 445556667779999999886 56999999999999999963 34444
Q ss_pred EEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 204 LQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 204 ~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
...+..+..+++... +| -+.+||+-+|.+.-|....
T Consensus 447 W~Dl~~lITAvcy~P-----------------dG-k~avIGt~~G~C~fY~t~~ 482 (712)
T KOG0283|consen 447 WNDLRDLITAVCYSP-----------------DG-KGAVIGTFNGYCRFYDTEG 482 (712)
T ss_pred ehhhhhhheeEEecc-----------------CC-ceEEEEEeccEEEEEEccC
Confidence 455556666666664 33 3589999999999987643
No 30
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=94.99 E-value=0.059 Score=53.55 Aligned_cols=54 Identities=26% Similarity=0.648 Sum_probs=34.1
Q ss_pred CCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeee---eeecCcceeEEEeee
Q psy14552 113 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSE---TIQMESEVLCMALSN 168 (290)
Q Consensus 113 ~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~---~~~l~~ei~~l~i~~ 168 (290)
.+..|++|+.++.+++|++.++.+.+|+++.. .+..... ...++.||+|+++.|
T Consensus 447 ~~~~I~~a~~~~~~v~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 447 AGSIIVAASINDPQVLVALSGGELVYFELDDN--KISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp TS---SEEEESSSEEEEEE-TTEEEEEEEETT--EEEEEEE----EE-SS-EEEEE---
T ss_pred CCCeEEEEEECCCEEEEEEeCCcEEEEEEECC--ceeeeeeccccccCCCceEEEEeCC
Confidence 55678899999999999999999999999973 2221111 124899999999875
No 31
>KOG1539|consensus
Probab=94.96 E-value=5.7 Score=41.68 Aligned_cols=108 Identities=15% Similarity=0.266 Sum_probs=73.3
Q ss_pred EEEEeecCceEEEEeeCCeEEEEEecCCCceec-CC-CceEEEEEeC--CCEEEEEEeCCeEEEEEEcCCCCCceeeeee
Q psy14552 79 IVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKE-SD-KKKIVRCAVN--QRQIVIALQGGRLIYFEMHPETGILDECSET 154 (290)
Q Consensus 79 Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~-~~-~~~Ii~as~~--~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~ 154 (290)
|..-+..=+-+++-.+.|++..+.+........ ++ ...|+++... -.-++||+.+|+|++|.+.-+ +++-+
T Consensus 165 l~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~d-----kil~s 239 (910)
T KOG1539|consen 165 LLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFD-----KILMS 239 (910)
T ss_pred EecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccC-----cEEEE
Confidence 333445556678888889888887754322211 11 1224455322 334999999999999998752 33334
Q ss_pred eecC-cceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC
Q psy14552 155 IQME-SEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ 196 (290)
Q Consensus 155 ~~l~-~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~ 196 (290)
...+ ..|+.++|... +.+.+++|..+|.+.+|.|+..
T Consensus 240 Fk~d~g~VtslSFrtD-----G~p~las~~~~G~m~~wDLe~k 277 (910)
T KOG1539|consen 240 FKQDWGRVTSLSFRTD-----GNPLLASGRSNGDMAFWDLEKK 277 (910)
T ss_pred EEccccceeEEEeccC-----CCeeEEeccCCceEEEEEcCCC
Confidence 5555 88999999753 4889999999999999999864
No 32
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=94.71 E-value=3.8 Score=38.53 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=74.3
Q ss_pred eCCCEEEEEEe----CCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeC-CCeEEEEEeCCC
Q psy14552 122 VNQRQIVIALQ----GGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLA-DNTVRLISLAPQ 196 (290)
Q Consensus 122 ~~~~~l~Val~----~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v~i~~l~~~ 196 (290)
.++..+.++.+ ++.|..+.+++++++|..+.........++-+++.+. ..+|+|+.+ +|++.+|.++++
T Consensus 46 ~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~------g~~l~vany~~g~v~v~~l~~~ 119 (345)
T PF10282_consen 46 PDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPD------GRFLYVANYGGGSVSVFPLDDD 119 (345)
T ss_dssp TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTT------SSEEEEEETTTTEEEEEEECTT
T ss_pred eCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecC------CCEEEEEEccCCeEEEEEccCC
Confidence 34444555444 4588888988744677665322236677777777532 578888885 999999999876
Q ss_pred CceeEeeEEe------------cCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCCcccc
Q psy14552 197 DCLKQKNLQG------------LPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSD 264 (290)
Q Consensus 197 ~~l~~~~~~~------------L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~l~~ 264 (290)
+.+....... -+.-|+.+.+.. +++..+..-++...+..|.++...+.|..
T Consensus 120 g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~p-----------------dg~~v~v~dlG~D~v~~~~~~~~~~~l~~ 182 (345)
T PF10282_consen 120 GSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSP-----------------DGRFVYVPDLGADRVYVYDIDDDTGKLTP 182 (345)
T ss_dssp SEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-T-----------------TSSEEEEEETTTTEEEEEEE-TTS-TEEE
T ss_pred cccceeeeecccCCCCCcccccccccceeEEECC-----------------CCCEEEEEecCCCEEEEEEEeCCCceEEE
Confidence 5454432111 012245554442 34554556899999999999987776643
No 33
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=94.36 E-value=0.43 Score=43.59 Aligned_cols=79 Identities=15% Similarity=0.281 Sum_probs=58.4
Q ss_pred cCcceeEEEeeeCC-CCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCcc
Q psy14552 157 MESEVLCMALSNAP-SGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVT 235 (290)
Q Consensus 157 l~~ei~~l~i~~~~-~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~ 235 (290)
-+..|+||+--..+ .+......|++|+.+|.++++. +. .+...++..++.+|..+...-. +
T Consensus 175 ~~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd--~~-af~il~~~~lpsvPv~i~~~G~---------------~ 236 (257)
T PF14779_consen 175 RQTVITCMATIKKSSADEDAVSCLVIGTESGEIYILD--PQ-AFTILKQVQLPSVPVFISVSGQ---------------Y 236 (257)
T ss_pred cCceeEEeeeecccccCCCCcceEEEEecCCeEEEEC--ch-hheeEEEEecCCCceEEEEEee---------------e
Confidence 56788998765443 1123568999999999888765 33 5777888889999997776632 3
Q ss_pred C-CceEEEEEecCceEEEE
Q psy14552 236 L-GNLYLYVGLQNGALLRM 253 (290)
Q Consensus 236 ~-~~~~L~iGl~dG~l~~~ 253 (290)
. ....++|..|||.++..
T Consensus 237 devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 237 DEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred eccceEEEEEeCCCEEEEE
Confidence 2 56779999999999865
No 34
>KOG1274|consensus
Probab=94.30 E-value=0.69 Score=48.53 Aligned_cols=111 Identities=12% Similarity=0.116 Sum_probs=80.2
Q ss_pred CCceEEEEeecCceEEEEeeCCeEEEEEecCCC--ceecCCCceE-EEE-EeCCCEEEEEEeCCeEEEEEEcCCCCCcee
Q psy14552 75 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVS--DKKESDKKKI-VRC-AVNQRQIVIALQGGRLIYFEMHPETGILDE 150 (290)
Q Consensus 75 ~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~--~~~~~~~~~I-i~a-s~~~~~l~Val~~~~i~~l~l~~~~~~l~~ 150 (290)
.|..|.+.+++.++++.+..++.+.-+.+.+.. .+..+--..| ..| +.++..++.|..|-.|.++++++. .+ +
T Consensus 55 ~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~-s~--~ 131 (933)
T KOG1274|consen 55 SGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDS-SQ--E 131 (933)
T ss_pred cCceeEEEeecccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEecccc-ch--h
Confidence 688999999999999999999999877765431 1211111112 222 556667888878888999998873 22 2
Q ss_pred eeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 151 CSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 151 ~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
. .-+....+++++++.+. ..+|++.+-||.|.+|.++.
T Consensus 132 ~-~lrgh~apVl~l~~~p~------~~fLAvss~dG~v~iw~~~~ 169 (933)
T KOG1274|consen 132 K-VLRGHDAPVLQLSYDPK------GNFLAVSSCDGKVQIWDLQD 169 (933)
T ss_pred e-eecccCCceeeeeEcCC------CCEEEEEecCceEEEEEccc
Confidence 1 22456789999999753 58999999999999999974
No 35
>PLN00181 protein SPA1-RELATED; Provisional
Probab=94.24 E-value=4.6 Score=42.43 Aligned_cols=149 Identities=14% Similarity=0.177 Sum_probs=82.9
Q ss_pred eEEEEeec--CceEEEEeeCCeEEEEEecCC----CceecC-----CCceE--EEEE-eCCCEEEEEEeCCeEEEEEEcC
Q psy14552 78 KIVRCAVN--QRQIVIALQGGRLIYFEMHPV----SDKKES-----DKKKI--VRCA-VNQRQIVIALQGGRLIYFEMHP 143 (290)
Q Consensus 78 ~Iv~as~n--~~qv~ial~~g~i~~~~~~~~----~~~~~~-----~~~~I--i~as-~~~~~l~Val~~~~i~~l~l~~ 143 (290)
.|.+++.+ +.+++.+-.+|.|..++.... ..+..+ .+..+ ++.+ ..+.+++.+..|++|+++.+..
T Consensus 485 ~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~ 564 (793)
T PLN00181 485 LVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVAR 564 (793)
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCC
Confidence 34444443 566777777888877765321 011000 11112 1111 2345677777799999998764
Q ss_pred CCCCceeeeeee-ecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCC
Q psy14552 144 ETGILDECSETI-QMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS 222 (290)
Q Consensus 144 ~~~~l~~~~~~~-~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~ 222 (290)
+.. .... .-...|.++++.+.+ ..+|+.|..||.+.+|.+.....+..+. ... .+..+.+..
T Consensus 565 --~~~---~~~~~~H~~~V~~l~~~p~~-----~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~---~~~---~v~~v~~~~- 627 (793)
T PLN00181 565 --SQL---VTEMKEHEKRVWSIDYSSAD-----PTLLASGSDDGSVKLWSINQGVSIGTIK---TKA---NICCVQFPS- 627 (793)
T ss_pred --CeE---EEEecCCCCCEEEEEEcCCC-----CCEEEEEcCCCEEEEEECCCCcEEEEEe---cCC---CeEEEEEeC-
Confidence 221 1112 234568888886432 4689999999999999986433333321 111 122222211
Q ss_pred CCCCCCCCCCCccCCceEEEEEecCceEEEEEEe
Q psy14552 223 DPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
....+|..|..||.+.-|.+.
T Consensus 628 -------------~~g~~latgs~dg~I~iwD~~ 648 (793)
T PLN00181 628 -------------ESGRSLAFGSADHKVYYYDLR 648 (793)
T ss_pred -------------CCCCEEEEEeCCCeEEEEECC
Confidence 123458888888888877653
No 36
>KOG0647|consensus
Probab=93.83 E-value=0.48 Score=44.09 Aligned_cols=98 Identities=21% Similarity=0.155 Sum_probs=64.0
Q ss_pred cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccC
Q psy14552 157 MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTL 236 (290)
Q Consensus 157 l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~ 236 (290)
-..+|++++|.+.. ..++++|.|||+|++|.+...+.+.....+.++.-+-.++-.+ +
T Consensus 26 P~DsIS~l~FSP~~-----~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-----------------d 83 (347)
T KOG0647|consen 26 PEDSISALAFSPQA-----DNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-----------------D 83 (347)
T ss_pred cccchheeEecccc-----CceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEcc-----------------C
Confidence 34678999998742 4677799999999999997544455544344443322332221 2
Q ss_pred CceEEEEEecCceEEEEEEeCCCCcccccceEEecCcceEEEEEEe
Q psy14552 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRC 282 (290)
Q Consensus 237 ~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l~~~~~ 282 (290)
+ ..+|.|=-||.+--+. ..++++. .+-.=..||+-+.+--
T Consensus 84 g-skVf~g~~Dk~~k~wD--L~S~Q~~---~v~~Hd~pvkt~~wv~ 123 (347)
T KOG0647|consen 84 G-SKVFSGGCDKQAKLWD--LASGQVS---QVAAHDAPVKTCHWVP 123 (347)
T ss_pred C-ceEEeeccCCceEEEE--ccCCCee---eeeecccceeEEEEec
Confidence 3 5589999999987664 4556543 4556677888766543
No 37
>KOG0266|consensus
Probab=93.81 E-value=7.3 Score=38.28 Aligned_cols=107 Identities=13% Similarity=0.124 Sum_probs=67.4
Q ss_pred CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEe
Q psy14552 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQK 202 (290)
Q Consensus 123 ~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~ 202 (290)
.++.++-|..|++|++..+.. +.....++ .-...|+++++.+. ..+++.|..||.+++|.+...... .+
T Consensus 257 ~g~~i~Sgs~D~tvriWd~~~--~~~~~~l~--~hs~~is~~~f~~d------~~~l~s~s~d~~i~vwd~~~~~~~-~~ 325 (456)
T KOG0266|consen 257 DGNLLVSGSDDGTVRIWDVRT--GECVRKLK--GHSDGISGLAFSPD------GNLLVSASYDGTIRVWDLETGSKL-CL 325 (456)
T ss_pred CCCEEEEecCCCcEEEEeccC--CeEEEeee--ccCCceEEEEECCC------CCEEEEcCCCccEEEEECCCCcee-ee
Confidence 344466666799999998875 33323221 13457888888643 578889988999999998643321 11
Q ss_pred eEEecC-CcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEe
Q psy14552 203 NLQGLP-DLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 203 ~~~~L~-~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
+ ...+ ..|..+..+.+. .+..||+++..|+.+.-+.+.
T Consensus 326 ~-~~~~~~~~~~~~~~~fs---------------p~~~~ll~~~~d~~~~~w~l~ 364 (456)
T KOG0266|consen 326 K-LLSGAENSAPVTSVQFS---------------PNGKYLLSASLDRTLKLWDLR 364 (456)
T ss_pred e-cccCCCCCCceeEEEEC---------------CCCcEEEEecCCCeEEEEEcc
Confidence 1 1111 122134444442 345689999999999988774
No 38
>KOG0279|consensus
Probab=93.77 E-value=4.4 Score=37.50 Aligned_cols=107 Identities=12% Similarity=0.180 Sum_probs=69.4
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCcee
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~ 200 (290)
+.+++.|+-|-.|+++.+..+++. ..+ ..+.--..|-.+.|.| +...|+.+.. .+|.+|.++....++
T Consensus 201 SpDGslcasGgkdg~~~LwdL~~~-k~l----ysl~a~~~v~sl~fsp------nrywL~~at~-~sIkIwdl~~~~~v~ 268 (315)
T KOG0279|consen 201 SPDGSLCASGGKDGEAMLWDLNEG-KNL----YSLEAFDIVNSLCFSP------NRYWLCAATA-TSIKIWDLESKAVVE 268 (315)
T ss_pred CCCCCEEecCCCCceEEEEEccCC-cee----EeccCCCeEeeEEecC------CceeEeeccC-CceEEEeccchhhhh
Confidence 455666776666888888888862 222 2223234455666653 2455555554 458999998766666
Q ss_pred EeeEEecCC-----cceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEE
Q psy14552 201 QKNLQGLPD-----LAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 201 ~~~~~~L~~-----~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
.++....+. .|+++.+.-. .....||.|.-||.+--+.+
T Consensus 269 ~l~~d~~g~s~~~~~~~clslaws----------------~dG~tLf~g~td~~irv~qv 312 (315)
T KOG0279|consen 269 ELKLDGIGPSSKAGDPICLSLAWS----------------ADGQTLFAGYTDNVIRVWQV 312 (315)
T ss_pred hccccccccccccCCcEEEEEEEc----------------CCCcEEEeeecCCcEEEEEe
Confidence 665444443 6888888864 23345999999999887765
No 39
>KOG1036|consensus
Probab=93.74 E-value=6 Score=36.98 Aligned_cols=139 Identities=12% Similarity=0.214 Sum_probs=87.1
Q ss_pred EEeecCceEEEEeeCCeEEEEEecCCCceec--CCCceEEEE-EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeec
Q psy14552 81 RCAVNQRQIVIALQGGRLIYFEMHPVSDKKE--SDKKKIVRC-AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQM 157 (290)
Q Consensus 81 ~as~n~~qv~ial~~g~i~~~~~~~~~~~~~--~~~~~Ii~a-s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l 157 (290)
.-+-+...++++.=+|++..+..... ++.. ..+.-+..| -.+..++++|..|+.|+.+.+... .. ..+. +-
T Consensus 20 ~f~~~~~~LLvssWDgslrlYdv~~~-~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~-~~--~~ig--th 93 (323)
T KOG1036|consen 20 KFSPSSSDLLVSSWDGSLRLYDVPAN-SLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTG-NE--DQIG--TH 93 (323)
T ss_pred EEcCcCCcEEEEeccCcEEEEeccch-hhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCC-cc--eeec--cC
Confidence 33334678888989999998887543 2222 233335555 466778999988999999887752 11 1111 22
Q ss_pred CcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecC--CcceEEEEEEecCCCCCCCCCCCCCcc
Q psy14552 158 ESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLP--DLAESLVMIEMGASDPTSSDEPAGPVT 235 (290)
Q Consensus 158 ~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~--~~p~Sl~~~~~~~~~~~~~~~~~~~~~ 235 (290)
..-+.|+.... ....++.|.||+++..|..-. +...+ ..+..+-...
T Consensus 94 ~~~i~ci~~~~------~~~~vIsgsWD~~ik~wD~R~--------~~~~~~~d~~kkVy~~~----------------- 142 (323)
T KOG1036|consen 94 DEGIRCIEYSY------EVGCVISGSWDKTIKFWDPRN--------KVVVGTFDQGKKVYCMD----------------- 142 (323)
T ss_pred CCceEEEEeec------cCCeEEEcccCccEEEEeccc--------cccccccccCceEEEEe-----------------
Confidence 44577776652 256788999999999987431 01111 1233332222
Q ss_pred CCceEEEEEecCceEEEEEEe
Q psy14552 236 LGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 236 ~~~~~L~iGl~dG~l~~~~~d 256 (290)
.....|.||+.|-.++-|.+-
T Consensus 143 v~g~~LvVg~~~r~v~iyDLR 163 (323)
T KOG1036|consen 143 VSGNRLVVGTSDRKVLIYDLR 163 (323)
T ss_pred ccCCEEEEeecCceEEEEEcc
Confidence 233359999999999999873
No 40
>KOG2106|consensus
Probab=93.69 E-value=8.3 Score=38.49 Aligned_cols=101 Identities=13% Similarity=0.154 Sum_probs=61.4
Q ss_pred cCceEEEEeeCCeEEEEEecCCCceecCCCceEEEEE--eCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCccee
Q psy14552 85 NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA--VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVL 162 (290)
Q Consensus 85 n~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~Ii~as--~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~ 162 (290)
.++|++-+-.++++-.-. +..-+|...-.-...+++ ..+ .+++|...+...++.... ..+.. .+.. ...++
T Consensus 379 s~~q~~T~gqdk~v~lW~-~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~--~~lv~--~~~d-~~~ls 451 (626)
T KOG2106|consen 379 SKNQLLTCGQDKHVRLWN-DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTET--QDLVT--IHTD-NEQLS 451 (626)
T ss_pred ChhheeeccCcceEEEcc-CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEeccc--ceeEE--EEec-CCceE
Confidence 356666666666655433 222345431111112332 334 688888777777766554 11212 2334 77899
Q ss_pred EEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCc
Q psy14552 163 CMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC 198 (290)
Q Consensus 163 ~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~ 198 (290)
|+++.+. -.+++||..|+.+++|.++.++.
T Consensus 452 ~v~ysp~------G~~lAvgs~d~~iyiy~Vs~~g~ 481 (626)
T KOG2106|consen 452 VVRYSPD------GAFLAVGSHDNHIYIYRVSANGR 481 (626)
T ss_pred EEEEcCC------CCEEEEecCCCeEEEEEECCCCc
Confidence 9999764 47999999999999999987653
No 41
>KOG0310|consensus
Probab=93.59 E-value=7.3 Score=38.38 Aligned_cols=63 Identities=14% Similarity=0.314 Sum_probs=43.5
Q ss_pred EEE-E--eCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEE
Q psy14552 118 VRC-A--VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLI 191 (290)
Q Consensus 118 i~a-s--~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~ 191 (290)
++| . .++.+++=|.-|+.+.+|.+.. . .+.-.+.+|..|..+++.+. ...+++|+.||.+.+-
T Consensus 241 VTcL~l~s~~~rLlS~sLD~~VKVfd~t~----~-Kvv~s~~~~~pvLsiavs~d------d~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 241 VTCLRLASDSTRLLSGSLDRHVKVFDTTN----Y-KVVHSWKYPGPVLSIAVSPD------DQTVVIGMSNGLVSIR 306 (487)
T ss_pred EEEEEeecCCceEeecccccceEEEEccc----e-EEEEeeecccceeeEEecCC------CceEEEecccceeeee
Confidence 555 3 3334444444489999998654 2 22346678999999888753 5789999999987764
No 42
>KOG1539|consensus
Probab=93.43 E-value=1.3 Score=46.12 Aligned_cols=123 Identities=23% Similarity=0.256 Sum_probs=77.9
Q ss_pred EEEEEEeCCeEEEEEEcCCCCC-ceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeE
Q psy14552 126 QIVIALQGGRLIYFEMHPETGI-LDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNL 204 (290)
Q Consensus 126 ~l~Val~~~~i~~l~l~~~~~~-l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~ 204 (290)
.++||..+|.+.++.+.. +. +.+. ...+..|+++.=.| --..++||+.||.|+++++.-++.|...+
T Consensus 174 KIvvGs~~G~lql~Nvrt--~K~v~~f---~~~~s~IT~ieqsP------aLDVVaiG~~~G~ViifNlK~dkil~sFk- 241 (910)
T KOG1539|consen 174 KIVVGSSQGRLQLWNVRT--GKVVYTF---QEFFSRITAIEQSP------ALDVVAIGLENGTVIIFNLKFDKILMSFK- 241 (910)
T ss_pred eEEEeecCCcEEEEEecc--CcEEEEe---cccccceeEeccCC------cceEEEEeccCceEEEEEcccCcEEEEEE-
Confidence 478887888888887765 22 1111 12456777764332 35799999999999999997665555553
Q ss_pred EecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCCc--ccc------cceEEecCcceE
Q psy14552 205 QGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGD--LSD------NRMRYLGSRPVK 276 (290)
Q Consensus 205 ~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~--l~~------~~~~~lG~~pv~ 276 (290)
+. -....++..- .+|.+.|-.|-.+|.+.-|.++...-. +.+ ....+|-.+||.
T Consensus 242 ~d-~g~VtslSFr-----------------tDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl 303 (910)
T KOG1539|consen 242 QD-WGRVTSLSFR-----------------TDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVL 303 (910)
T ss_pred cc-ccceeEEEec-----------------cCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceE
Confidence 22 1222333322 367888999999999999988654321 110 224566667776
Q ss_pred EE
Q psy14552 277 LF 278 (290)
Q Consensus 277 l~ 278 (290)
+.
T Consensus 304 ~t 305 (910)
T KOG1539|consen 304 VT 305 (910)
T ss_pred ee
Confidence 64
No 43
>KOG0299|consensus
Probab=93.36 E-value=8.7 Score=37.71 Aligned_cols=119 Identities=13% Similarity=0.133 Sum_probs=67.0
Q ss_pred eCCeEEEEEecCCCceec-CCCceEEEE-EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeee--------eecCcceeE
Q psy14552 94 QGGRLIYFEMHPVSDKKE-SDKKKIVRC-AVNQRQIVIALQGGRLIYFEMHPETGILDECSET--------IQMESEVLC 163 (290)
Q Consensus 94 ~~g~i~~~~~~~~~~~~~-~~~~~Ii~a-s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~--------~~l~~ei~~ 163 (290)
.++++.++.+.+..++.- +..-.+-+| -.|...++.|..+|.|.+.++-....-+.....+ ..-|+=|+.
T Consensus 306 rDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Wits 385 (479)
T KOG0299|consen 306 RDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITS 385 (479)
T ss_pred ccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceee
Confidence 456666666654444333 222245444 4677778888888888887765421111111111 111123444
Q ss_pred EEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC-CceeEeeEEecCCcceEEEEEE
Q psy14552 164 MALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ-DCLKQKNLQGLPDLAESLVMIE 218 (290)
Q Consensus 164 l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~-~~l~~~~~~~L~~~p~Sl~~~~ 218 (290)
++..+ ++..++-|.|||.|.+|.+.+. ..+..+-..++.....+|.+..
T Consensus 386 la~i~------~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~ 435 (479)
T KOG0299|consen 386 LAVIP------GSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSN 435 (479)
T ss_pred eEecc------cCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEcc
Confidence 44432 5789999999999999999754 2344443333445556776553
No 44
>KOG2048|consensus
Probab=93.35 E-value=11 Score=38.75 Aligned_cols=68 Identities=18% Similarity=0.308 Sum_probs=48.4
Q ss_pred CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcc---eeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCce
Q psy14552 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESE---VLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCL 199 (290)
Q Consensus 123 ~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~e---i~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l 199 (290)
.+.+++|||.|+.+.+|++.++ .+ +. ...++++ +.++++.+. ...++.|+.||.|++|.....+.+
T Consensus 121 ~~~~l~IgcddGvl~~~s~~p~--~I-~~--~r~l~rq~sRvLslsw~~~------~~~i~~Gs~Dg~Iriwd~~~~~t~ 189 (691)
T KOG2048|consen 121 ENTILAIGCDDGVLYDFSIGPD--KI-TY--KRSLMRQKSRVLSLSWNPT------GTKIAGGSIDGVIRIWDVKSGQTL 189 (691)
T ss_pred ccceEEeecCCceEEEEecCCc--eE-EE--EeecccccceEEEEEecCC------ccEEEecccCceEEEEEcCCCceE
Confidence 3566999999998888888772 22 21 3445555 778887532 456999999999999998755555
Q ss_pred eE
Q psy14552 200 KQ 201 (290)
Q Consensus 200 ~~ 201 (290)
..
T Consensus 190 ~~ 191 (691)
T KOG2048|consen 190 HI 191 (691)
T ss_pred EE
Confidence 53
No 45
>KOG0316|consensus
Probab=93.33 E-value=6.2 Score=35.90 Aligned_cols=192 Identities=14% Similarity=0.161 Sum_probs=101.1
Q ss_pred EEEeecCCccCCCCeEEEEeeCCCeEEEEecCCeEEEeecCcceeeeccCCCCCceEEEEeecCceEEEEeeCCeEEEEE
Q psy14552 23 VEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFE 102 (290)
Q Consensus 23 ~~e~~~~gf~~~~~Ti~~~~~~~~~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~~Iv~as~n~~qv~ial~~g~i~~~~ 102 (290)
..+++.-.|+.+..-++.|.+. .++|+-|.....+.=.++--.....|.+..+++..++---.+|++--+.
T Consensus 101 ~aqVNtV~fNeesSVv~SgsfD---------~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtyd 171 (307)
T KOG0316|consen 101 LAQVNTVRFNEESSVVASGSFD---------SSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYD 171 (307)
T ss_pred cceeeEEEecCcceEEEecccc---------ceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEE
Confidence 3444444565555555555552 3455555433222211111134556777777888887777788777666
Q ss_pred ecCCCceecC-CCceEEEE--EeCCCEEEEEEeCCeEEEEEEcCCCCC-ceeeeeeeecCcceeEEEeeeCCCCCccccE
Q psy14552 103 MHPVSDKKES-DKKKIVRC--AVNQRQIVIALQGGRLIYFEMHPETGI-LDECSETIQMESEVLCMALSNAPSGEQMSRF 178 (290)
Q Consensus 103 ~~~~~~~~~~-~~~~Ii~a--s~~~~~l~Val~~~~i~~l~l~~~~~~-l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~ 178 (290)
|... .+... -+.-|.+. +.+++..++++-|++++++.-+ +|+ |.+...+..++.-+=|. +. ++...
T Consensus 172 iR~G-~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~--tGklL~sYkGhkn~eykldc~-l~------qsdth 241 (307)
T KOG0316|consen 172 IRKG-TLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKE--TGKLLKSYKGHKNMEYKLDCC-LN------QSDTH 241 (307)
T ss_pred eecc-eeehhhcCCcceeEEecCCCCEEEEeeccceeeecccc--hhHHHHHhcccccceeeeeee-ec------cccee
Confidence 6432 22111 11113222 4445556667679999987433 343 22332233344444332 11 14567
Q ss_pred EEEEeCCCeEEEEEeCCCCceeEeeEEecCCcc--eEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEE
Q psy14552 179 LAVGLADNTVRLISLAPQDCLKQKNLQGLPDLA--ESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMV 254 (290)
Q Consensus 179 l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p--~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~ 254 (290)
++-|..||.++.|.|-.. +.+.+...+..| .+|... ....-++++++-|.+.-+.
T Consensus 242 V~sgSEDG~Vy~wdLvd~---~~~sk~~~~~~v~v~dl~~h------------------p~~~~f~~A~~~~~~~~~~ 298 (307)
T KOG0316|consen 242 VFSGSEDGKVYFWDLVDE---TQISKLSVVSTVIVTDLSCH------------------PTMDDFITATGHGDLFWYQ 298 (307)
T ss_pred EEeccCCceEEEEEeccc---eeeeeeccCCceeEEeeecc------------------cCccceeEecCCceeceee
Confidence 888889999999998532 233333333333 233222 1233478888888877664
No 46
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=93.15 E-value=3.3 Score=33.05 Aligned_cols=92 Identities=17% Similarity=0.087 Sum_probs=61.1
Q ss_pred eeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceE
Q psy14552 161 VLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240 (290)
Q Consensus 161 i~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
+++|++.+.+. .+...|+||+.|..|++|+=+ +.+..+ .....+.+|+-.. + ..
T Consensus 2 V~al~~~d~d~--dg~~eLlvGs~D~~IRvf~~~--e~~~Ei---~e~~~v~~L~~~~------------------~-~~ 55 (111)
T PF14783_consen 2 VTALCLFDFDG--DGENELLVGSDDFEIRVFKGD--EIVAEI---TETDKVTSLCSLG------------------G-GR 55 (111)
T ss_pred eeEEEEEecCC--CCcceEEEecCCcEEEEEeCC--cEEEEE---ecccceEEEEEcC------------------C-CE
Confidence 56677776542 257899999999999999832 233333 3334566665542 1 33
Q ss_pred EEEEecCceEEEEEEeCCCCcccccceEEecCcceEEEEEEeCC
Q psy14552 241 LYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284 (290)
Q Consensus 241 L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l~~~~~~~ 284 (290)
..-||.||.+--|.-.. ..|+.+=-.+|+.+..+..+|
T Consensus 56 F~Y~l~NGTVGvY~~~~------RlWRiKSK~~~~~~~~~D~~g 93 (111)
T PF14783_consen 56 FAYALANGTVGVYDRSQ------RLWRIKSKNQVTSMAFYDING 93 (111)
T ss_pred EEEEecCCEEEEEeCcc------eeeeeccCCCeEEEEEEcCCC
Confidence 67799999999885322 235555667788888887765
No 47
>KOG1036|consensus
Probab=92.70 E-value=8.7 Score=35.93 Aligned_cols=153 Identities=16% Similarity=0.269 Sum_probs=96.7
Q ss_pred CCceEEEEeec-CceEEEEeeCCeEEEEEecCCCceecCCCceEEEE-E--eCCCEEEEEEeCCeEEEEEEcCCCCCcee
Q psy14552 75 DKKKIVRCAVN-QRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC-A--VNQRQIVIALQGGRLIYFEMHPETGILDE 150 (290)
Q Consensus 75 ~~~~Iv~as~n-~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~Ii~a-s--~~~~~l~Val~~~~i~~l~l~~~~~~l~~ 150 (290)
-+.+|..|+.. +.+++....+|+|-.+.++...+...-.+.+.+.| . .....++-|.||.+|.+...... .
T Consensus 53 ~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~-----~ 127 (323)
T KOG1036|consen 53 HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNK-----V 127 (323)
T ss_pred cCCceeeeeccCCceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccc-----c
Confidence 34556666655 67888888999998888776554444444455666 3 23455666779999998765421 1
Q ss_pred eeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCC
Q psy14552 151 CSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEP 230 (290)
Q Consensus 151 ~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~ 230 (290)
.......+..|=|++.. ...|+||+.|..+.+|.|.......+.....|.-+-|++++.. +.
T Consensus 128 ~~~~~d~~kkVy~~~v~--------g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~p-n~--------- 189 (323)
T KOG1036|consen 128 VVGTFDQGKKVYCMDVS--------GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVP-NG--------- 189 (323)
T ss_pred cccccccCceEEEEecc--------CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEec-CC---------
Confidence 11123445677777763 5789999999999999986432222333334555668888875 11
Q ss_pred CCCccCCceEEEEEecCceEEEEEEeCC
Q psy14552 231 AGPVTLGNLYLYVGLQNGALLRMVVDQT 258 (290)
Q Consensus 231 ~~~~~~~~~~L~iGl~dG~l~~~~~d~~ 258 (290)
++ -++|.-||-+..=-+|+.
T Consensus 190 -----eG---y~~sSieGRVavE~~d~s 209 (323)
T KOG1036|consen 190 -----EG---YVVSSIEGRVAVEYFDDS 209 (323)
T ss_pred -----Cc---eEEEeecceEEEEccCCc
Confidence 11 467888887764334543
No 48
>KOG4649|consensus
Probab=92.63 E-value=8.4 Score=35.60 Aligned_cols=155 Identities=18% Similarity=0.156 Sum_probs=85.4
Q ss_pred CCceEEEEeecCceEEEEeeCCeEEEEEecCC-CceecCCCceEEEE-EeCCCEEEEEEeCCeEEEEEEcCCCCCceeee
Q psy14552 75 DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPV-SDKKESDKKKIVRC-AVNQRQIVIALQGGRLIYFEMHPETGILDECS 152 (290)
Q Consensus 75 ~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~-~~~~~~~~~~Ii~a-s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~ 152 (290)
+..+.|.+--..++++++--.|.+........ --|+..-+.+|-.. -.-++++++|+.++.++++.... |+. +
T Consensus 12 DaspLVV~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~t--Gs~--~- 86 (354)
T KOG4649|consen 12 DASPLVVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKT--GSQ--I- 86 (354)
T ss_pred cCCcEEEecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecc--hhh--e-
Confidence 34445555555566666655555554433222 25777555556332 23467899999999999887764 532 2
Q ss_pred eeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCC
Q psy14552 153 ETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAG 232 (290)
Q Consensus 153 ~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~ 232 (290)
.......+|-+-+-.+.+ ...+.+|..|+..+ .||+...-...+.+.=|++-.|=++.
T Consensus 87 w~f~~~~~vk~~a~~d~~-----~glIycgshd~~~y--alD~~~~~cVykskcgG~~f~sP~i~--------------- 144 (354)
T KOG4649|consen 87 WNFVILETVKVRAQCDFD-----GGLIYCGSHDGNFY--ALDPKTYGCVYKSKCGGGTFVSPVIA--------------- 144 (354)
T ss_pred eeeeehhhhccceEEcCC-----CceEEEecCCCcEE--EecccccceEEecccCCceeccceec---------------
Confidence 223334445443333332 56889999999765 45543222223222222221111111
Q ss_pred CccCCceEEEEEecCceEEEEEEeCCC
Q psy14552 233 PVTLGNLYLYVGLQNGALLRMVVDQTS 259 (290)
Q Consensus 233 ~~~~~~~~L~iGl~dG~l~~~~~d~~~ 259 (290)
.+...||++.-.|.+++...++.+
T Consensus 145 ---~g~~sly~a~t~G~vlavt~~~~~ 168 (354)
T KOG4649|consen 145 ---PGDGSLYAAITAGAVLAVTKNPYS 168 (354)
T ss_pred ---CCCceEEEEeccceEEEEccCCCC
Confidence 234458888899999888775543
No 49
>PLN00181 protein SPA1-RELATED; Provisional
Probab=92.53 E-value=16 Score=38.49 Aligned_cols=100 Identities=17% Similarity=0.282 Sum_probs=62.8
Q ss_pred CceEEEEeeCCeEEEEEecCCCceec-C-CCceEEEEEe---CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcc
Q psy14552 86 QRQIVIALQGGRLIYFEMHPVSDKKE-S-DKKKIVRCAV---NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESE 160 (290)
Q Consensus 86 ~~qv~ial~~g~i~~~~~~~~~~~~~-~-~~~~Ii~as~---~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~e 160 (290)
..+++.+-.+|.|..+.+........ . ....|.+++. ++..++.|..|++|+++.+.. +.. .........
T Consensus 545 ~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~--~~~---~~~~~~~~~ 619 (793)
T PLN00181 545 KSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ--GVS---IGTIKTKAN 619 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCC--CcE---EEEEecCCC
Confidence 45777777788888776643221111 1 1222433332 345677777799999998875 221 123334457
Q ss_pred eeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 161 VLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 161 i~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+.|+.+.+. ...++++|..||.+.+|.+..
T Consensus 620 v~~v~~~~~-----~g~~latgs~dg~I~iwD~~~ 649 (793)
T PLN00181 620 ICCVQFPSE-----SGRSLAFGSADHKVYYYDLRN 649 (793)
T ss_pred eEEEEEeCC-----CCCEEEEEeCCCeEEEEECCC
Confidence 888887532 257899999999999999853
No 50
>KOG0266|consensus
Probab=92.46 E-value=12 Score=36.85 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=66.3
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCcee
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~ 200 (290)
+.++..++=+..|.+|+++.+... +.....+ ...+.-+.+++|.+. ...++.|.+|+++++|.+....+..
T Consensus 212 s~d~~~l~s~s~D~tiriwd~~~~-~~~~~~l--~gH~~~v~~~~f~p~------g~~i~Sgs~D~tvriWd~~~~~~~~ 282 (456)
T KOG0266|consen 212 SPDGSYLLSGSDDKTLRIWDLKDD-GRNLKTL--KGHSTYVTSVAFSPD------GNLLVSGSDDGTVRIWDVRTGECVR 282 (456)
T ss_pred CCCCcEEEEecCCceEEEeeccCC-CeEEEEe--cCCCCceEEEEecCC------CCEEEEecCCCcEEEEeccCCeEEE
Confidence 344555555556999999998431 2221211 135667888888754 3789999999999999987422222
Q ss_pred EeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCCc
Q psy14552 201 QKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGD 261 (290)
Q Consensus 201 ~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~ 261 (290)
.+ ..-..+.+-+... ....+|..|=.||.+.-|.+ .++.
T Consensus 283 ~l---~~hs~~is~~~f~-----------------~d~~~l~s~s~d~~i~vwd~--~~~~ 321 (456)
T KOG0266|consen 283 KL---KGHSDGISGLAFS-----------------PDGNLLVSASYDGTIRVWDL--ETGS 321 (456)
T ss_pred ee---eccCCceEEEEEC-----------------CCCCEEEEcCCCccEEEEEC--CCCc
Confidence 22 1112233333332 22345888877998887754 4444
No 51
>KOG0646|consensus
Probab=92.34 E-value=7.1 Score=38.32 Aligned_cols=161 Identities=13% Similarity=0.183 Sum_probs=91.9
Q ss_pred CCCceEEEEeecCceEEEEe-eCCeEEEEEecCCCceec--CCCceEEEE---EeCCCEEEEEEeCCeEEEEEEcC----
Q psy14552 74 SDKKKIVRCAVNQRQIVIAL-QGGRLIYFEMHPVSDKKE--SDKKKIVRC---AVNQRQIVIALQGGRLIYFEMHP---- 143 (290)
Q Consensus 74 ~~~~~Iv~as~n~~qv~ial-~~g~i~~~~~~~~~~~~~--~~~~~Ii~a---s~~~~~l~Val~~~~i~~l~l~~---- 143 (290)
-+|.-...++.|.++.++|- -.|.|+.-|+.. +.+.- ..+-+=++| +.+++.+.-|..|+.|++..+-.
T Consensus 80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelss-G~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a 158 (476)
T KOG0646|consen 80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSS-GILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSA 158 (476)
T ss_pred cccceeeeecCCCceEEEeecccCcEEEEEecc-ccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccc
Confidence 35666777888888888886 778888777763 22211 122222555 45566677776788887655432
Q ss_pred CCCCceeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCC
Q psy14552 144 ETGILDECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS 222 (290)
Q Consensus 144 ~~~~l~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~ 222 (290)
+...-...+..+. -.-+|+-+.+.... -..+|+-...|.++.+|++....-|..+ . .|.++..+-+.
T Consensus 159 ~~~~~~~p~~~f~~HtlsITDl~ig~Gg----~~~rl~TaS~D~t~k~wdlS~g~LLlti---~---fp~si~av~lD-- 226 (476)
T KOG0646|consen 159 DNDHSVKPLHIFSDHTLSITDLQIGSGG----TNARLYTASEDRTIKLWDLSLGVLLLTI---T---FPSSIKAVALD-- 226 (476)
T ss_pred ccCCCccceeeeccCcceeEEEEecCCC----ccceEEEecCCceEEEEEeccceeeEEE---e---cCCcceeEEEc--
Confidence 1111001110111 12234444443221 3567888888999999998633222222 2 45555555542
Q ss_pred CCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCC
Q psy14552 223 DPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG 260 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~ 260 (290)
......|||..+|.+.-+.+...++
T Consensus 227 -------------pae~~~yiGt~~G~I~~~~~~~~~~ 251 (476)
T KOG0646|consen 227 -------------PAERVVYIGTEEGKIFQNLLFKLSG 251 (476)
T ss_pred -------------ccccEEEecCCcceEEeeehhcCCc
Confidence 2345699999999999887755443
No 52
>KOG2114|consensus
Probab=91.92 E-value=8 Score=40.81 Aligned_cols=115 Identities=17% Similarity=0.297 Sum_probs=64.5
Q ss_pred eEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcc-eeEEEeeeCCCCCccccEEEEEeCCC----eEEE
Q psy14552 116 KIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESE-VLCMALSNAPSGEQMSRFLAVGLADN----TVRL 190 (290)
Q Consensus 116 ~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~e-i~~l~i~~~~~~~~~~~~l~VGl~dg----~v~i 190 (290)
.+.+|+.++..+++|..+|.|.++. . ++.....-...+.+ +..+-+.. +....+.||-.++ .+.+
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln--~---s~~~~~~fqa~~~siv~~L~~~~-----~~~~L~sv~Ed~~~np~llki 96 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILN--S---SFQLIRGFQAYEQSIVQFLYILN-----KQNFLFSVGEDEQGNPVLLKI 96 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEec--c---cceeeehheecchhhhhHhhccc-----CceEEEEEeecCCCCceEEEE
Confidence 4566688888899998888887752 2 12121111123444 44443321 1234455666544 6888
Q ss_pred EEeCCC---C---ceeEeeEEec--C--CcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 191 ISLAPQ---D---CLKQKNLQGL--P--DLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 191 ~~l~~~---~---~l~~~~~~~L--~--~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
|++++. . ++-......+ | .-|.|.+.+. +.-..+.||..||.++.++=|.
T Consensus 97 w~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs-----------------~~l~~Iv~Gf~nG~V~~~~GDi 156 (933)
T KOG2114|consen 97 WDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVS-----------------EDLKTIVCGFTNGLVICYKGDI 156 (933)
T ss_pred ecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEE-----------------ccccEEEEEecCcEEEEEcCcc
Confidence 988653 1 1211222221 2 3566666664 2345699999999999987443
No 53
>KOG2106|consensus
Probab=91.64 E-value=16 Score=36.59 Aligned_cols=175 Identities=15% Similarity=0.152 Sum_probs=104.2
Q ss_pred CCCCceEEEEeecCceEEEEeeCCeEEEEEecCCCceec-CCCceE--EEEEeCCCEEEEEEeCCeEEEEEEcCCCCCce
Q psy14552 73 ESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKE-SDKKKI--VRCAVNQRQIVIALQGGRLIYFEMHPETGILD 149 (290)
Q Consensus 73 ~~~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~-~~~~~I--i~as~~~~~l~Val~~~~i~~l~l~~~~~~l~ 149 (290)
|++.-+|-...-+.+-++|-.+...|+.-.++....... -.+.++ .+..+...|++-+..|..+++.. + ..+
T Consensus 326 Pe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~-~---~k~- 400 (626)
T KOG2106|consen 326 PEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN-D---HKL- 400 (626)
T ss_pred chhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc-C---Cce-
Confidence 345556666677777788888888777555443322221 122233 33355566666665688888776 2 122
Q ss_pred eeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCC
Q psy14552 150 ECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDE 229 (290)
Q Consensus 150 ~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~ 229 (290)
+ -.+.+..+.-|+.+.+. ..+++|+..|-.+++...... +-.++.. +.|.|.+-..
T Consensus 401 ~--wt~~~~d~~~~~~fhps-------g~va~Gt~~G~w~V~d~e~~~-lv~~~~d---~~~ls~v~ys----------- 456 (626)
T KOG2106|consen 401 E--WTKIIEDPAECADFHPS-------GVVAVGTATGRWFVLDTETQD-LVTIHTD---NEQLSVVRYS----------- 456 (626)
T ss_pred e--EEEEecCceeEeeccCc-------ceEEEeeccceEEEEecccce-eEEEEec---CCceEEEEEc-----------
Confidence 2 24456777888888753 389999999988877765322 3333222 4555554432
Q ss_pred CCCCccCCceEEEEEecCceEEEEEEeCCCCcccccceEEecCcceEEEEEEeCC
Q psy14552 230 PAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQG 284 (290)
Q Consensus 230 ~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l~~~~~~~ 284 (290)
....+|-+|..|++++-|.++. +|....+-.+-=| .|+.---...++
T Consensus 457 ------p~G~~lAvgs~d~~iyiy~Vs~-~g~~y~r~~k~~g-s~ithLDwS~Ds 503 (626)
T KOG2106|consen 457 ------PDGAFLAVGSHDNHIYIYRVSA-NGRKYSRVGKCSG-SPITHLDWSSDS 503 (626)
T ss_pred ------CCCCEEEEecCCCeEEEEEECC-CCcEEEEeeeecC-ceeEEeeecCCC
Confidence 2235699999999999999987 4443332223334 676554444333
No 54
>KOG0277|consensus
Probab=91.61 E-value=1.9 Score=39.41 Aligned_cols=94 Identities=18% Similarity=0.260 Sum_probs=54.9
Q ss_pred eeCCeEEEEEecCCCceecC-----CCceEEEE-EeC-CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEE
Q psy14552 93 LQGGRLIYFEMHPVSDKKES-----DKKKIVRC-AVN-QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMA 165 (290)
Q Consensus 93 l~~g~i~~~~~~~~~~~~~~-----~~~~Ii~a-s~~-~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~ 165 (290)
..+|+|..+|.+....+.+- +.--.-.| +.+ .++++.++.||+++++.+...+.-+.... +-.+||-.+.
T Consensus 35 ~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~k---EH~~EV~Svd 111 (311)
T KOG0277|consen 35 AGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFK---EHKREVYSVD 111 (311)
T ss_pred ccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHH---hhhhheEEec
Confidence 46799999988633333221 11112333 344 45677777799999998664222222211 2346776665
Q ss_pred eeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 166 LSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 166 i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
-.+. +...++.+.|||+|.+|.-+
T Consensus 112 wn~~-----~r~~~ltsSWD~TiKLW~~~ 135 (311)
T KOG0277|consen 112 WNTV-----RRRIFLTSSWDGTIKLWDPN 135 (311)
T ss_pred cccc-----cceeEEeeccCCceEeecCC
Confidence 4332 34556677999999999854
No 55
>KOG0296|consensus
Probab=90.82 E-value=16 Score=35.06 Aligned_cols=91 Identities=21% Similarity=0.270 Sum_probs=56.0
Q ss_pred cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccC
Q psy14552 157 MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTL 236 (290)
Q Consensus 157 l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~ 236 (290)
...++.|+.+.+... .-+..++|.-||.|.+|.+.. .+.+++-.. +..+.-+. ..
T Consensus 282 ~e~~~esve~~~~ss---~lpL~A~G~vdG~i~iyD~a~---~~~R~~c~h---e~~V~~l~----------------w~ 336 (399)
T KOG0296|consen 282 QEELDESVESIPSSS---KLPLAACGSVDGTIAIYDLAA---STLRHICEH---EDGVTKLK----------------WL 336 (399)
T ss_pred chhhhhhhhhccccc---ccchhhcccccceEEEEeccc---chhheeccC---CCceEEEE----------------Ec
Confidence 345555555554432 357888999999999999852 222221111 12222222 24
Q ss_pred CceEEEEEecCceEEEEEEeCCCCcccccceEEecCcceEE
Q psy14552 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277 (290)
Q Consensus 237 ~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l 277 (290)
+..||+-+..||.+.-| |..+|.+ ++.+-|.+---+
T Consensus 337 ~t~~l~t~c~~g~v~~w--DaRtG~l---~~~y~GH~~~Il 372 (399)
T KOG0296|consen 337 NTDYLLTACANGKVRQW--DARTGQL---KFTYTGHQMGIL 372 (399)
T ss_pred CcchheeeccCceEEee--eccccce---EEEEecCchhee
Confidence 46789999999999766 6778876 466777654333
No 56
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=89.52 E-value=16 Score=34.35 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=72.4
Q ss_pred cCceEEEEeeCCeEEEEEecCC-CceecCCCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcce-e
Q psy14552 85 NQRQIVIALQGGRLIYFEMHPV-SDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEV-L 162 (290)
Q Consensus 85 n~~qv~ial~~g~i~~~~~~~~-~~~~~~~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei-~ 162 (290)
.+..+.+...+|.+..+..... ..|..+... ...-...+.++.++..++.++.++... +.+ ..+...++... +
T Consensus 240 ~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~-~~~p~~~~~~vyv~~~~G~l~~~d~~t--G~~--~W~~~~~~~~~~s 314 (377)
T TIGR03300 240 DGGQVYAVSYQGRVAALDLRSGRVLWKRDASS-YQGPAVDDNRLYVTDADGVVVALDRRS--GSE--LWKNDELKYRQLT 314 (377)
T ss_pred ECCEEEEEEcCCEEEEEECCCCcEEEeeccCC-ccCceEeCCEEEEECCCCeEEEEECCC--CcE--EEccccccCCccc
Confidence 3567777777888888877533 246553211 111123456677776788888887654 431 11111222211 1
Q ss_pred EEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcc--eEEEEEEecCCCCCCCCCCCCCccCCceE
Q psy14552 163 CMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLA--ESLVMIEMGASDPTSSDEPAGPVTLGNLY 240 (290)
Q Consensus 163 ~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p--~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
...+ ...+++++..||.++.++.+.. +.+.+..++.-+ .+-++. +. .
T Consensus 315 sp~i--------~g~~l~~~~~~G~l~~~d~~tG---~~~~~~~~~~~~~~~sp~~~-------------------~~-~ 363 (377)
T TIGR03300 315 APAV--------VGGYLVVGDFEGYLHWLSREDG---SFVARLKTDGSGIASPPVVV-------------------GD-G 363 (377)
T ss_pred cCEE--------ECCEEEEEeCCCEEEEEECCCC---CEEEEEEcCCCccccCCEEE-------------------CC-E
Confidence 1111 1357889999999888775432 222233333211 111122 22 3
Q ss_pred EEEEecCceEEEE
Q psy14552 241 LYVGLQNGALLRM 253 (290)
Q Consensus 241 L~iGl~dG~l~~~ 253 (290)
||++..||.|+.|
T Consensus 364 l~v~~~dG~l~~~ 376 (377)
T TIGR03300 364 LLVQTRDGDLYAF 376 (377)
T ss_pred EEEEeCCceEEEe
Confidence 9999999999877
No 57
>KOG0294|consensus
Probab=89.38 E-value=17 Score=34.30 Aligned_cols=105 Identities=12% Similarity=0.175 Sum_probs=66.0
Q ss_pred ceEEEEeecCceEEEEeeCCeEEEEEecCCC---ceecCCCceEEEEEe--CC--CEEEEEEeCCeEEEEEEcCCCCCce
Q psy14552 77 KKIVRCAVNQRQIVIALQGGRLIYFEMHPVS---DKKESDKKKIVRCAV--NQ--RQIVIALQGGRLIYFEMHPETGILD 149 (290)
Q Consensus 77 ~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~---~~~~~~~~~Ii~as~--~~--~~l~Val~~~~i~~l~l~~~~~~l~ 149 (290)
-.|.+.+++.+|++=--++-+|..|.|.... .+..+.+ .|.|+.- .. +.++=|..|+.|.++..++ ..
T Consensus 44 ~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~Hag-sitaL~F~~~~S~shLlS~sdDG~i~iw~~~~----W~ 118 (362)
T KOG0294|consen 44 GSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAG-SITALKFYPPLSKSHLLSGSDDGHIIIWRVGS----WE 118 (362)
T ss_pred cceeEEEecceeEeccCCCCcEEEEeccchhhhcceecccc-ceEEEEecCCcchhheeeecCCCcEEEEEcCC----eE
Confidence 4588999999999988888899888875433 2322332 2455532 21 2455555688999988765 32
Q ss_pred eeeeee-ecCcceeEEEeeeCCCCCccccEEEEEeC-CCeEEEEEeC
Q psy14552 150 ECSETI-QMESEVLCMALSNAPSGEQMSRFLAVGLA-DNTVRLISLA 194 (290)
Q Consensus 150 ~~~~~~-~l~~ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v~i~~l~ 194 (290)
. ++.. .--..|+-+++.|. ..|+...+ |+.++.|+|-
T Consensus 119 ~-~~slK~H~~~Vt~lsiHPS-------~KLALsVg~D~~lr~WNLV 157 (362)
T KOG0294|consen 119 L-LKSLKAHKGQVTDLSIHPS-------GKLALSVGGDQVLRTWNLV 157 (362)
T ss_pred E-eeeecccccccceeEecCC-------CceEEEEcCCceeeeehhh
Confidence 2 2222 22345888888764 24555554 8898888874
No 58
>KOG0310|consensus
Probab=88.90 E-value=26 Score=34.70 Aligned_cols=107 Identities=17% Similarity=0.251 Sum_probs=64.4
Q ss_pred CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEee
Q psy14552 124 QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKN 203 (290)
Q Consensus 124 ~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~ 203 (290)
+++++ ...++.+.+..+-. .+++.- ...+--.+|+|+.+... +..|+.|.-||.+.+|.+. .+..+.
T Consensus 208 gs~ia-sAgGn~vkVWDl~~-G~qll~--~~~~H~KtVTcL~l~s~------~~rLlS~sLD~~VKVfd~t---~~Kvv~ 274 (487)
T KOG0310|consen 208 GSLIA-SAGGNSVKVWDLTT-GGQLLT--SMFNHNKTVTCLRLASD------STRLLSGSLDRHVKVFDTT---NYKVVH 274 (487)
T ss_pred CCEEE-EcCCCeEEEEEecC-Cceehh--hhhcccceEEEEEeecC------CceEeecccccceEEEEcc---ceEEEE
Confidence 34444 44678888887764 232211 11224568999999632 3667777779999999965 366665
Q ss_pred EEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEE--EeCCCCc
Q psy14552 204 LQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMV--VDQTSGD 261 (290)
Q Consensus 204 ~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~--~d~~~~~ 261 (290)
.-.. |-.++-+.. ..+...+.+||.||.+.--. ++.++..
T Consensus 275 s~~~---~~pvLsiav---------------s~dd~t~viGmsnGlv~~rr~~~k~k~s~ 316 (487)
T KOG0310|consen 275 SWKY---PGPVLSIAV---------------SPDDQTVVIGMSNGLVSIRRREVKKKPSK 316 (487)
T ss_pred eeec---ccceeeEEe---------------cCCCceEEEecccceeeeehhhcccCCCc
Confidence 4443 333333332 12345599999999887542 4554443
No 59
>KOG0291|consensus
Probab=88.04 E-value=38 Score=35.59 Aligned_cols=171 Identities=14% Similarity=0.241 Sum_probs=103.5
Q ss_pred ceEEEEeec--CceEEEEeeCCeEEEEEecCCC---ceecCCCceEEEEEeC--CCEEEEEEeC-CeEEEEEEcCCCCCc
Q psy14552 77 KKIVRCAVN--QRQIVIALQGGRLIYFEMHPVS---DKKESDKKKIVRCAVN--QRQIVIALQG-GRLIYFEMHPETGIL 148 (290)
Q Consensus 77 ~~Iv~as~n--~~qv~ial~~g~i~~~~~~~~~---~~~~~~~~~Ii~as~~--~~~l~Val~~-~~i~~l~l~~~~~~l 148 (290)
..+.+|++. -.-++++.++|...++|+.+.. .+. .....|.+++.| +..+++|+.. +.+.+.+...++.
T Consensus 266 ~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LS-is~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsY-- 342 (893)
T KOG0291|consen 266 SKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLS-ISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESY-- 342 (893)
T ss_pred cceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEee-cccceeeEEEecccCCEEEEcCCccceEEEEEeeccce--
Confidence 567777777 4567778889999888885432 111 233446555444 7789999863 5677777664311
Q ss_pred eeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCC
Q psy14552 149 DECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSD 228 (290)
Q Consensus 149 ~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~ 228 (290)
++++..--.+++|++..+. ..+++.|..||.|.+|.....-|+.... . .+ ..+..+++.
T Consensus 343 --VlKQQgH~~~i~~l~YSpD------gq~iaTG~eDgKVKvWn~~SgfC~vTFt--e-Ht--s~Vt~v~f~-------- 401 (893)
T KOG0291|consen 343 --VLKQQGHSDRITSLAYSPD------GQLIATGAEDGKVKVWNTQSGFCFVTFT--E-HT--SGVTAVQFT-------- 401 (893)
T ss_pred --eeeccccccceeeEEECCC------CcEEEeccCCCcEEEEeccCceEEEEec--c-CC--CceEEEEEE--------
Confidence 1222222346788877643 4799999999999999964221322221 1 11 122233331
Q ss_pred CCCCCccCCceEEEEEecCceEEEEEEeCCCCcccccceEEecCcceEEEEEEeC
Q psy14552 229 EPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKLFKIRCQ 283 (290)
Q Consensus 229 ~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l~~~~~~ 283 (290)
.....|+..--||.+--+.+.. + ..-+.+-+..|+.+..+...
T Consensus 402 -------~~g~~llssSLDGtVRAwDlkR--Y---rNfRTft~P~p~QfscvavD 444 (893)
T KOG0291|consen 402 -------ARGNVLLSSSLDGTVRAWDLKR--Y---RNFRTFTSPEPIQFSCVAVD 444 (893)
T ss_pred -------ecCCEEEEeecCCeEEeeeecc--c---ceeeeecCCCceeeeEEEEc
Confidence 2233488888899887776533 1 12245678999999887765
No 60
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=87.66 E-value=4.5 Score=40.68 Aligned_cols=74 Identities=18% Similarity=0.302 Sum_probs=48.9
Q ss_pred EEEEeC--CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 118 VRCAVN--QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 118 i~as~~--~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
++|+.+ ...+++||.|++|+++..... .... ...+--+++++..+. ..+++||...|.+..|.+.
T Consensus 263 ~~ca~sp~E~kLvlGC~DgSiiLyD~~~~---~t~~---~ka~~~P~~iaWHp~------gai~~V~s~qGelQ~FD~A- 329 (545)
T PF11768_consen 263 ICCARSPSEDKLVLGCEDGSIILYDTTRG---VTLL---AKAEFIPTLIAWHPD------GAIFVVGSEQGELQCFDMA- 329 (545)
T ss_pred eEEecCcccceEEEEecCCeEEEEEcCCC---eeee---eeecccceEEEEcCC------CcEEEEEcCCceEEEEEee-
Confidence 455544 445999999999999986642 2222 233445666666543 5789999999999999874
Q ss_pred CCceeEeeEEec
Q psy14552 196 QDCLKQKNLQGL 207 (290)
Q Consensus 196 ~~~l~~~~~~~L 207 (290)
|..++.+.+
T Consensus 330 ---Lspi~~qLl 338 (545)
T PF11768_consen 330 ---LSPIKMQLL 338 (545)
T ss_pred ---cCccceeec
Confidence 444444444
No 61
>KOG2321|consensus
Probab=87.36 E-value=8 Score=39.15 Aligned_cols=123 Identities=15% Similarity=0.217 Sum_probs=73.3
Q ss_pred EEEEEeCCeEEEEEEcCCCCCceeeeeeeecC-cceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCc---eeEe
Q psy14552 127 IVIALQGGRLIYFEMHPETGILDECSETIQME-SEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC---LKQK 202 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~-~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~---l~~~ 202 (290)
+.++.++..|+=|.|+. |.+ +.+.... .++-++.+.+. ...|++|+.||.|..|.--..+. |...
T Consensus 148 ly~~gsg~evYRlNLEq--Grf---L~P~~~~~~~lN~v~in~~------hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~ 216 (703)
T KOG2321|consen 148 LYLVGSGSEVYRLNLEQ--GRF---LNPFETDSGELNVVSINEE------HGLLACGTEDGVVEFWDPRDKSRVGTLDAA 216 (703)
T ss_pred EEEeecCcceEEEEccc--ccc---ccccccccccceeeeecCc------cceEEecccCceEEEecchhhhhheeeecc
Confidence 45554677788788876 543 3344433 55666766543 56899999999999886321111 1111
Q ss_pred eEEecCC-----cceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCCcccccceEEecCcceEE
Q psy14552 203 NLQGLPD-----LAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277 (290)
Q Consensus 203 ~~~~L~~-----~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l 277 (290)
. .+.. ...++..+.|. +..+.+-||+.+|.++-|.+-...--+ .....+.-|++.
T Consensus 217 ~--~v~s~pg~~~~~svTal~F~---------------d~gL~~aVGts~G~v~iyDLRa~~pl~---~kdh~~e~pi~~ 276 (703)
T KOG2321|consen 217 S--SVNSHPGGDAAPSVTALKFR---------------DDGLHVAVGTSTGSVLIYDLRASKPLL---VKDHGYELPIKK 276 (703)
T ss_pred c--ccCCCccccccCcceEEEec---------------CCceeEEeeccCCcEEEEEcccCCcee---ecccCCccceee
Confidence 1 1111 22445555552 236789999999999999886543332 234566666666
Q ss_pred EEE
Q psy14552 278 FKI 280 (290)
Q Consensus 278 ~~~ 280 (290)
...
T Consensus 277 l~~ 279 (703)
T KOG2321|consen 277 LDW 279 (703)
T ss_pred ecc
Confidence 444
No 62
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=87.26 E-value=1.9 Score=28.92 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=30.3
Q ss_pred eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 154 TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 154 ~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
...++.+|.+++..|. -..+++|+.+|.|.+|.++.
T Consensus 7 ~k~l~~~v~~~~w~P~------mdLiA~~t~~g~v~v~Rl~~ 42 (47)
T PF12894_consen 7 EKNLPSRVSCMSWCPT------MDLIALGTEDGEVLVYRLNW 42 (47)
T ss_pred ccCCCCcEEEEEECCC------CCEEEEEECCCeEEEEECCC
Confidence 4567888999999864 57999999999999999863
No 63
>KOG2048|consensus
Probab=87.15 E-value=39 Score=34.82 Aligned_cols=146 Identities=14% Similarity=0.155 Sum_probs=75.7
Q ss_pred eEEEEeec--CceEEEEeeCCeEEEEEecCCCceecCCCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceee----
Q psy14552 78 KIVRCAVN--QRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDEC---- 151 (290)
Q Consensus 78 ~Iv~as~n--~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~---- 151 (290)
+|++.+.+ .+|++++.++|.|=.. +....|.... .+....++..=.++ |-...++|+..- ++++.|.
T Consensus 27 ~I~slA~s~kS~~lAvsRt~g~IEiw--N~~~~w~~~~---vi~g~~drsIE~L~-W~e~~RLFS~g~-sg~i~EwDl~~ 99 (691)
T KOG2048|consen 27 EIVSLAYSHKSNQLAVSRTDGNIEIW--NLSNNWFLEP---VIHGPEDRSIESLA-WAEGGRLFSSGL-SGSITEWDLHT 99 (691)
T ss_pred ceEEEEEeccCCceeeeccCCcEEEE--ccCCCceeeE---EEecCCCCceeeEE-EccCCeEEeecC-CceEEEEeccc
Confidence 35555554 7899999999966433 3334564410 12222222221111 222334444443 1333221
Q ss_pred ----eeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCc-ceEEEEEEecCCCCCC
Q psy14552 152 ----SETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDL-AESLVMIEMGASDPTS 226 (290)
Q Consensus 152 ----~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~-p~Sl~~~~~~~~~~~~ 226 (290)
...-.....|=.+++.+. ...++||+.||++..++..++. ++- +..|+.+ -|-|.+. ..
T Consensus 100 lk~~~~~d~~gg~IWsiai~p~------~~~l~IgcddGvl~~~s~~p~~-I~~--~r~l~rq~sRvLsls-w~------ 163 (691)
T KOG2048|consen 100 LKQKYNIDSNGGAIWSIAINPE------NTILAIGCDDGVLYDFSIGPDK-ITY--KRSLMRQKSRVLSLS-WN------ 163 (691)
T ss_pred CceeEEecCCCcceeEEEeCCc------cceEEeecCCceEEEEecCCce-EEE--EeecccccceEEEEE-ec------
Confidence 111123445555666543 5789999999988888876542 222 2345544 3434333 21
Q ss_pred CCCCCCCccCCceEEEEEecCceEEEEEE
Q psy14552 227 SDEPAGPVTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 227 ~~~~~~~~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
.....|+.|..||.+--+.+
T Consensus 164 ---------~~~~~i~~Gs~Dg~Iriwd~ 183 (691)
T KOG2048|consen 164 ---------PTGTKIAGGSIDGVIRIWDV 183 (691)
T ss_pred ---------CCccEEEecccCceEEEEEc
Confidence 12334999999998776654
No 64
>KOG0270|consensus
Probab=86.95 E-value=19 Score=35.35 Aligned_cols=115 Identities=12% Similarity=0.208 Sum_probs=73.9
Q ss_pred CCceEEEEeec--CceEEEEee-CCeEEEEEec----CCCceecCCCceEEEEEeC-CCEEEEEEeCCeEEEEEEcCCCC
Q psy14552 75 DKKKIVRCAVN--QRQIVIALQ-GGRLIYFEMH----PVSDKKESDKKKIVRCAVN-QRQIVIALQGGRLIYFEMHPETG 146 (290)
Q Consensus 75 ~~~~Iv~as~n--~~qv~ial~-~g~i~~~~~~----~~~~~~~~~~~~Ii~as~~-~~~l~Val~~~~i~~l~l~~~~~ 146 (290)
.+.+|-+..-+ .+++++.=+ +|++.++-+. ....|.-...++.++-... ...+++++.||++++|.+... +
T Consensus 285 ~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~-~ 363 (463)
T KOG0270|consen 285 HGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNP-G 363 (463)
T ss_pred cCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCC-C
Confidence 45556565555 344443322 4567666654 2346888777776666544 344888888999999998862 3
Q ss_pred CceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 147 ILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 147 ~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
. .+.....-..+|+++++... ...++.-+..|++|.+|+++..+
T Consensus 364 ~--~vwt~~AHd~~ISgl~~n~~-----~p~~l~t~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 364 K--PVWTLKAHDDEISGLSVNIQ-----TPGLLSTASTDKVVKLWKFDVDS 407 (463)
T ss_pred C--ceeEEEeccCCcceEEecCC-----CCcceeeccccceEEEEeecCCC
Confidence 2 11111234679999998643 24567777789999999997543
No 65
>KOG0294|consensus
Probab=86.49 E-value=30 Score=32.74 Aligned_cols=70 Identities=10% Similarity=0.133 Sum_probs=51.7
Q ss_pred EEE-EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 118 VRC-AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 118 i~a-s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
++| ++++..+|=|.+|.+|+++.+... .++..++ .-...|+++.|.+.. ....|+.|..||.|.+|..++
T Consensus 46 itavAVs~~~~aSGssDetI~IYDm~k~-~qlg~ll---~HagsitaL~F~~~~----S~shLlS~sdDG~i~iw~~~~ 116 (362)
T KOG0294|consen 46 ITALAVSGPYVASGSSDETIHIYDMRKR-KQLGILL---SHAGSITALKFYPPL----SKSHLLSGSDDGHIIIWRVGS 116 (362)
T ss_pred eeEEEecceeEeccCCCCcEEEEeccch-hhhccee---ccccceEEEEecCCc----chhheeeecCCCcEEEEEcCC
Confidence 555 888888888888999999998862 3333332 236789999986542 234899999999999999874
No 66
>KOG0319|consensus
Probab=86.35 E-value=5.6 Score=41.10 Aligned_cols=105 Identities=11% Similarity=0.090 Sum_probs=67.7
Q ss_pred CceEEEEeeCCeEEEEEecCCCceecCCCceEEEE-E--eCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCccee
Q psy14552 86 QRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRC-A--VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVL 162 (290)
Q Consensus 86 ~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~Ii~a-s--~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~ 162 (290)
+.++++|...+++-|+.+....--..+.+.+++-+ + ..+.-++-+..|.++++..++++..+...+.+-....++|.
T Consensus 336 ~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svg 415 (775)
T KOG0319|consen 336 ESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVG 415 (775)
T ss_pred cceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccc
Confidence 48899999999998886643321122455555444 3 33333444446999999999653222111111112567888
Q ss_pred EEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 163 CMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 163 ~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
++++.. .+..|++-+..|+++.+|.++.
T Consensus 416 ava~~~-----~~asffvsvS~D~tlK~W~l~~ 443 (775)
T KOG0319|consen 416 AVAGSK-----LGASFFVSVSQDCTLKLWDLPK 443 (775)
T ss_pred eeeecc-----cCccEEEEecCCceEEEecCCC
Confidence 888842 2688999999999999999975
No 67
>KOG2055|consensus
Probab=85.72 E-value=39 Score=33.43 Aligned_cols=149 Identities=17% Similarity=0.205 Sum_probs=86.9
Q ss_pred CCceEEEEeec-Cce-EEEEeeCCeEEEEEecC----CCceecCCCce---E--EEEEeCCCEEEEEEeCCeEEEEEEcC
Q psy14552 75 DKKKIVRCAVN-QRQ-IVIALQGGRLIYFEMHP----VSDKKESDKKK---I--VRCAVNQRQIVIALQGGRLIYFEMHP 143 (290)
Q Consensus 75 ~~~~Iv~as~n-~~q-v~ial~~g~i~~~~~~~----~~~~~~~~~~~---I--i~as~~~~~l~Val~~~~i~~l~l~~ 143 (290)
.+.+|-+|... +.+ ++++ ++.+=+|+..+. ...+.+|.+++ | -..+-.++.++++-..+.|+++....
T Consensus 256 ~~fPi~~a~f~p~G~~~i~~-s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT 334 (514)
T KOG2055|consen 256 EKFPIQKAEFAPNGHSVIFT-SGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKT 334 (514)
T ss_pred ccCccceeeecCCCceEEEe-cccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhh
Confidence 34456666555 333 4444 444333333332 22344444443 2 11123344677776788888886553
Q ss_pred CCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCc-ceEEEEEEecCC
Q psy14552 144 ETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDL-AESLVMIEMGAS 222 (290)
Q Consensus 144 ~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~-p~Sl~~~~~~~~ 222 (290)
+ +.+....++..++-+.|.. .+..|.+...+|.|.+|.+....++..- ..-|.+ -.|++...
T Consensus 335 --~---eli~s~KieG~v~~~~fsS------dsk~l~~~~~~GeV~v~nl~~~~~~~rf--~D~G~v~gts~~~S~---- 397 (514)
T KOG2055|consen 335 --K---ELITSFKIEGVVSDFTFSS------DSKELLASGGTGEVYVWNLRQNSCLHRF--VDDGSVHGTSLCISL---- 397 (514)
T ss_pred --h---hhhheeeeccEEeeEEEec------CCcEEEEEcCCceEEEEecCCcceEEEE--eecCccceeeeeecC----
Confidence 3 3344667889898888862 2467777778999999999765443332 333443 24554442
Q ss_pred CCCCCCCCCCCccCCceEEEEEecCceEEEEEE
Q psy14552 223 DPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
+..||-+|...|.+=-|..
T Consensus 398 --------------ng~ylA~GS~~GiVNIYd~ 416 (514)
T KOG2055|consen 398 --------------NGSYLATGSDSGIVNIYDG 416 (514)
T ss_pred --------------CCceEEeccCcceEEEecc
Confidence 3348999999999887753
No 68
>KOG1407|consensus
Probab=85.34 E-value=16 Score=33.66 Aligned_cols=115 Identities=16% Similarity=0.250 Sum_probs=61.8
Q ss_pred CceEEEEeecCceEEEEeeCCeEEEEEecCCCceec-CCCceEEEE-EeCCCEEEEEEeC-CeEEEEEEcCCCCCceeee
Q psy14552 76 KKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKE-SDKKKIVRC-AVNQRQIVIALQG-GRLIYFEMHPETGILDECS 152 (290)
Q Consensus 76 ~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~-~~~~~Ii~a-s~~~~~l~Val~~-~~i~~l~l~~~~~~l~~~~ 152 (290)
+-.+...+-.+.|+++.=.+.+|.++-......... +-..+..-+ ..+.+.+.+...+ |+|.+++.+. |.-+.
T Consensus 108 eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsyps----Lkpv~ 183 (313)
T KOG1407|consen 108 ENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPS----LKPVQ 183 (313)
T ss_pred cceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccc----ccccc
Confidence 334444555566666555555565554322111111 111111122 2344445555554 8899998774 22211
Q ss_pred eeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCcee
Q psy14552 153 ETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200 (290)
Q Consensus 153 ~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~ 200 (290)
....-|.+=.|++|.|. ..|+++|..|-.+.+|.+++--|+.
T Consensus 184 si~AH~snCicI~f~p~------GryfA~GsADAlvSLWD~~ELiC~R 225 (313)
T KOG1407|consen 184 SIKAHPSNCICIEFDPD------GRYFATGSADALVSLWDVDELICER 225 (313)
T ss_pred ccccCCcceEEEEECCC------CceEeeccccceeeccChhHhhhhe
Confidence 11124666677777643 5899999999999999887543433
No 69
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=85.27 E-value=31 Score=33.53 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=43.6
Q ss_pred eCCCEEEEEEeCCeEEEEEEcCCCCCceee--ee----eeecCcceeEEEeeeCC--CCCccccEEEEEeCCCeEEEEEe
Q psy14552 122 VNQRQIVIALQGGRLIYFEMHPETGILDEC--SE----TIQMESEVLCMALSNAP--SGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 122 ~~~~~l~Val~~~~i~~l~l~~~~~~l~~~--~~----~~~l~~ei~~l~i~~~~--~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
.+-..++||..++.+.++.+.- ..+.-. .. ...-...|+++.|.... .....+..|+||+..|.+..|++
T Consensus 95 S~iGFvaigy~~G~l~viD~RG--PavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkI 172 (395)
T PF08596_consen 95 SDIGFVAIGYESGSLVVIDLRG--PAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKI 172 (395)
T ss_dssp -BTSEEEEEETTSEEEEEETTT--TEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEE
T ss_pred CCCcEEEEEecCCcEEEEECCC--CeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEE
Confidence 3456799999899998887753 111110 00 01123356666665322 22346799999999999999998
Q ss_pred CC
Q psy14552 194 AP 195 (290)
Q Consensus 194 ~~ 195 (290)
.+
T Consensus 173 lp 174 (395)
T PF08596_consen 173 LP 174 (395)
T ss_dssp EE
T ss_pred ec
Confidence 65
No 70
>KOG2445|consensus
Probab=85.17 E-value=34 Score=32.27 Aligned_cols=106 Identities=18% Similarity=0.244 Sum_probs=60.5
Q ss_pred EEEEEeCCeEEEEEEcCCCCCceeeeeeeecCccee--------------EEEeeeCCCCCccccEEEEEeCC-----Ce
Q psy14552 127 IVIALQGGRLIYFEMHPETGILDECSETIQMESEVL--------------CMALSNAPSGEQMSRFLAVGLAD-----NT 187 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~--------------~l~i~~~~~~~~~~~~l~VGl~d-----g~ 187 (290)
++-+..|+.||+++..+- ..| ...++.+|+. |++-. .++...++++||..+ +.
T Consensus 129 lA~~~aDG~lRIYEA~dp-~nL----s~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn---~sr~~~p~iAvgs~e~a~~~~~ 200 (361)
T KOG2445|consen 129 LAAASADGILRIYEAPDP-MNL----SQWTLQHEIQNVIDPPGKNKQPCFCVSWN---PSRMHEPLIAVGSDEDAPHLNK 200 (361)
T ss_pred EEEeccCcEEEEEecCCc-ccc----ccchhhhhhhhccCCcccccCcceEEeec---cccccCceEEEEcccCCccccc
Confidence 333346999999987651 222 2344445544 44443 234467999999975 47
Q ss_pred EEEEEeCCCC-ceeEeeEEecCCc---ceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 188 VRLISLAPQD-CLKQKNLQGLPDL---AESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 188 v~i~~l~~~~-~l~~~~~~~L~~~---p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
+.+|..++.. ....+ ..|.+. .++|....- .......|-+|.+|| +--|++..
T Consensus 201 ~~Iye~~e~~rKw~kv--a~L~d~~dpI~di~wAPn--------------~Gr~y~~lAvA~kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 201 VKIYEYNENGRKWLKV--AELPDHTDPIRDISWAPN--------------IGRSYHLLAVATKDG-VRIFKVKV 257 (361)
T ss_pred eEEEEecCCcceeeee--hhcCCCCCcceeeeeccc--------------cCCceeeEEEeecCc-EEEEEEee
Confidence 8888887643 22222 234433 355544421 112234478899999 55577753
No 71
>KOG1273|consensus
Probab=85.02 E-value=36 Score=32.33 Aligned_cols=170 Identities=14% Similarity=0.192 Sum_probs=89.0
Q ss_pred ecCceEEEEeeCCeEEEEEecCCC--ceecCCCceEEEE---EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecC
Q psy14552 84 VNQRQIVIALQGGRLIYFEMHPVS--DKKESDKKKIVRC---AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQME 158 (290)
Q Consensus 84 ~n~~qv~ial~~g~i~~~~~~~~~--~~~~~~~~~Ii~a---s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~ 158 (290)
.+..++++-+.+|+++...+.... ... ..+..=++| +..+..++-+..|..|..+.+-. |+ +++++.++
T Consensus 33 ~~G~~lAvGc~nG~vvI~D~~T~~iar~l-saH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~--gs---~l~rirf~ 106 (405)
T KOG1273|consen 33 RWGDYLAVGCANGRVVIYDFDTFRIARML-SAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLK--GS---PLKRIRFD 106 (405)
T ss_pred cCcceeeeeccCCcEEEEEccccchhhhh-hccccceeEEEecCCCCEeeeecCCceeEEEeccC--CC---ceeEEEcc
Confidence 347899999999999988765432 100 122221333 45666777777788998887765 43 24566778
Q ss_pred cceeEEEeeeCCCCCccccEEEEEeCCC-eEEEEEeCCCCceeEeeEEecCCc-ceEEEEEEecCCCCCCCCCCCCCccC
Q psy14552 159 SEVLCMALSNAPSGEQMSRFLAVGLADN-TVRLISLAPQDCLKQKNLQGLPDL-AESLVMIEMGASDPTSSDEPAGPVTL 236 (290)
Q Consensus 159 ~ei~~l~i~~~~~~~~~~~~l~VGl~dg-~v~i~~l~~~~~l~~~~~~~L~~~-p~Sl~~~~~~~~~~~~~~~~~~~~~~ 236 (290)
+-|....+.|.. ...+++.=+... .+..++ ++. . ..|+.- +.++-. ....+.-..
T Consensus 107 spv~~~q~hp~k----~n~~va~~~~~sp~vi~~s-~~~---h----~~Lp~d~d~dln~-----------sas~~~fdr 163 (405)
T KOG1273|consen 107 SPVWGAQWHPRK----RNKCVATIMEESPVVIDFS-DPK---H----SVLPKDDDGDLNS-----------SASHGVFDR 163 (405)
T ss_pred Cccceeeecccc----CCeEEEEEecCCcEEEEec-CCc---e----eeccCCCcccccc-----------ccccccccC
Confidence 888777776542 234444334322 333332 111 1 112210 000000 001111123
Q ss_pred CceEEEEEecCceEEEEEEeCCCCcccccceEEecC-cceEEEEEEeCCce
Q psy14552 237 GNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGS-RPVKLFKIRCQGNE 286 (290)
Q Consensus 237 ~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~-~pv~l~~~~~~~~~ 286 (290)
..-|++.|+.-|.+.-|+.+. -+. ....++-+ +.+|-..+..+|..
T Consensus 164 ~g~yIitGtsKGkllv~~a~t--~e~--vas~rits~~~IK~I~~s~~g~~ 210 (405)
T KOG1273|consen 164 RGKYIITGTSKGKLLVYDAET--LEC--VASFRITSVQAIKQIIVSRKGRF 210 (405)
T ss_pred CCCEEEEecCcceEEEEecch--hee--eeeeeechheeeeEEEEeccCcE
Confidence 456899999999999886543 222 22223333 55655555555543
No 72
>KOG0283|consensus
Probab=84.86 E-value=14 Score=38.38 Aligned_cols=64 Identities=9% Similarity=0.143 Sum_probs=41.7
Q ss_pred CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeee-ecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETI-QMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 123 ~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~-~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
....++|...|..|+++.+.+. .|....+-. ...+++. .+|.. ...|++.|..|..|++|++++
T Consensus 513 ~~~~vLVTSnDSrIRI~d~~~~--~lv~KfKG~~n~~SQ~~-Asfs~------Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 513 DPDEVLVTSNDSRIRIYDGRDK--DLVHKFKGFRNTSSQIS-ASFSS------DGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CCCeEEEecCCCceEEEeccch--hhhhhhcccccCCccee-eeEcc------CCCEEEEeecCceEEEEeCCC
Confidence 3446899888999999988542 233333322 2333333 34432 258999999999999999864
No 73
>KOG2055|consensus
Probab=84.66 E-value=44 Score=33.10 Aligned_cols=103 Identities=16% Similarity=0.231 Sum_probs=63.0
Q ss_pred EEEeecCceEEEEeeCCeEEEEEecCCCceecCCCceE---EEE---EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeee
Q psy14552 80 VRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKI---VRC---AVNQRQIVIALQGGRLIYFEMHPETGILDECSE 153 (290)
Q Consensus 80 v~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~I---i~a---s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~ 153 (290)
-.+|-.+++++++=.+|.|..+.+. ..+|... .+| ++. +..+..+++++.++.|.++.+... .++.
T Consensus 309 FeVShd~~fia~~G~~G~I~lLhak-T~eli~s--~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~-----~~~~ 380 (514)
T KOG2055|consen 309 FEVSHDSNFIAIAGNNGHIHLLHAK-TKELITS--FKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQN-----SCLH 380 (514)
T ss_pred eEecCCCCeEEEcccCceEEeehhh-hhhhhhe--eeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCc-----ceEE
Confidence 3455567788888888999887664 3455441 122 222 444555666667889999998762 2222
Q ss_pred eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 154 TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 154 ~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
+..-+..+.-.+++.... ..|+++|...|.|-+|..+
T Consensus 381 rf~D~G~v~gts~~~S~n----g~ylA~GS~~GiVNIYd~~ 417 (514)
T KOG2055|consen 381 RFVDDGSVHGTSLCISLN----GSYLATGSDSGIVNIYDGN 417 (514)
T ss_pred EEeecCccceeeeeecCC----CceEEeccCcceEEEeccc
Confidence 333233333333332222 3599999999999999864
No 74
>KOG0646|consensus
Probab=84.34 E-value=20 Score=35.32 Aligned_cols=102 Identities=18% Similarity=0.224 Sum_probs=67.1
Q ss_pred EEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCc----ee-
Q psy14552 126 QIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC----LK- 200 (290)
Q Consensus 126 ~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~----l~- 200 (290)
++.-+..|.++++.++.- + .++.+..+|+.|.++.+.+. ...++||..+|.+++..+..... +.
T Consensus 190 rl~TaS~D~t~k~wdlS~--g---~LLlti~fp~si~av~lDpa------e~~~yiGt~~G~I~~~~~~~~~~~~~~v~~ 258 (476)
T KOG0646|consen 190 RLYTASEDRTIKLWDLSL--G---VLLLTITFPSSIKAVALDPA------ERVVYIGTEEGKIFQNLLFKLSGQSAGVNQ 258 (476)
T ss_pred eEEEecCCceEEEEEecc--c---eeeEEEecCCcceeEEEccc------ccEEEecCCcceEEeeehhcCCcccccccc
Confidence 355555688998888764 3 33557889999999999764 57899999999988776542211 10
Q ss_pred ------EeeEEe-cC---CcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEE
Q psy14552 201 ------QKNLQG-LP---DLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 201 ------~~~~~~-L~---~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
...... .| .-+.+-+.+.+ ++.+ |..|=.||.+.-+.+
T Consensus 259 k~~~~~~t~~~~~~Gh~~~~~ITcLais~----------------Dgtl-LlSGd~dg~VcvWdi 306 (476)
T KOG0646|consen 259 KGRHEENTQINVLVGHENESAITCLAIST----------------DGTL-LLSGDEDGKVCVWDI 306 (476)
T ss_pred cccccccceeeeeccccCCcceeEEEEec----------------CccE-EEeeCCCCCEEEEec
Confidence 001111 11 12555556654 4555 999999999987754
No 75
>KOG2111|consensus
Probab=84.32 E-value=38 Score=32.03 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=39.9
Q ss_pred CceEEEEeecCceEEEEe--eCCeEEEEEecCCCce-ec----CCCceE--EEEEeCCCEEEEEEeCCeEEEEEEcC
Q psy14552 76 KKKIVRCAVNQRQIVIAL--QGGRLIYFEMHPVSDK-KE----SDKKKI--VRCAVNQRQIVIALQGGRLIYFEMHP 143 (290)
Q Consensus 76 ~~~Iv~as~n~~qv~ial--~~g~i~~~~~~~~~~~-~~----~~~~~I--i~as~~~~~l~Val~~~~i~~l~l~~ 143 (290)
...|.+.+.|..--++|. ..|+++=..=...++. .+ .++..| ++-+.+...+||+..-++|++|.+.+
T Consensus 181 ~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 181 DSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred cCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 456778888854444444 4577764432222322 12 122223 22245667799998789999999886
No 76
>KOG0277|consensus
Probab=83.99 E-value=35 Score=31.44 Aligned_cols=148 Identities=18% Similarity=0.300 Sum_probs=81.7
Q ss_pred eecCCccCCCCeEEEEe----eCCC--eEEEEe-cCCeEEE---eecCcceeeeccCCCCCceEEEEeecCceEEEEeeC
Q psy14552 26 VSGSGFYGTTPTLCCSA----MGDN--SIVQVY-PDGIRHI---GAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQG 95 (290)
Q Consensus 26 ~~~~gf~~~~~Ti~~~~----~~~~--~ivQVt-~~~v~l~---~~~~~~~~~~~~~~~~~~~Iv~as~n~~qv~ial~~ 95 (290)
++-+.|..+.--+++++ .++| .|+-++ +.+++.. +.+...|. +.=+-.+++|++.|..+
T Consensus 14 vqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~Lfd-----------V~Wse~~e~~~~~a~GD 82 (311)
T KOG0277|consen 14 VQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFD-----------VAWSENHENQVIAASGD 82 (311)
T ss_pred eEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeE-----------eeecCCCcceEEEEecC
Confidence 33456665533333333 2445 377776 7777664 22222222 22233458899999999
Q ss_pred CeEEEEEecCC----CceecCCCceEEEEEeC---CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcc--eeEEEe
Q psy14552 96 GRLIYFEMHPV----SDKKESDKKKIVRCAVN---QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESE--VLCMAL 166 (290)
Q Consensus 96 g~i~~~~~~~~----~~~~~~~~~~Ii~as~~---~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~e--i~~l~i 166 (290)
|.+-.|..... ..|++ ..+|+.+++-| +.+++.+.||++|.+...+-. .++.. .. .++ |--..+
T Consensus 83 GSLrl~d~~~~s~Pi~~~kE-H~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~-~Sv~T----f~-gh~~~Iy~a~~ 155 (311)
T KOG0277|consen 83 GSLRLFDLTMPSKPIHKFKE-HKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP-NSVQT----FN-GHNSCIYQAAF 155 (311)
T ss_pred ceEEEeccCCCCcchhHHHh-hhhheEEeccccccceeEEeeccCCceEeecCCCC-cceEe----ec-CCccEEEEEec
Confidence 99987764322 22333 45677888543 445888899999988765431 12211 11 111 111222
Q ss_pred eeCCCCCccccEEEEEeCCCeEEEEEeCCC
Q psy14552 167 SNAPSGEQMSRFLAVGLADNTVRLISLAPQ 196 (290)
Q Consensus 167 ~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~ 196 (290)
.|. ....++-..+||.+.+|.+...
T Consensus 156 sp~-----~~nlfas~Sgd~~l~lwdvr~~ 180 (311)
T KOG0277|consen 156 SPH-----IPNLFASASGDGTLRLWDVRSP 180 (311)
T ss_pred CCC-----CCCeEEEccCCceEEEEEecCC
Confidence 222 1345555567999999998643
No 77
>KOG0772|consensus
Probab=83.60 E-value=52 Score=33.14 Aligned_cols=160 Identities=14% Similarity=0.151 Sum_probs=80.7
Q ss_pred CCCceEEEEeecCceEEEEeeCC---eEEEEEe---cC----CCceecCCCceE-EEE-EeCCCEEEEEEeCCeEEEEEE
Q psy14552 74 SDKKKIVRCAVNQRQIVIALQGG---RLIYFEM---HP----VSDKKESDKKKI-VRC-AVNQRQIVIALQGGRLIYFEM 141 (290)
Q Consensus 74 ~~~~~Iv~as~n~~qv~ial~~g---~i~~~~~---~~----~~~~~~~~~~~I-i~a-s~~~~~l~Val~~~~i~~l~l 141 (290)
+.|.+||+|-.-|+-=+-.++|| .+.++.+ +. ..++.|.+...| ... +.++.+++|........+|.=
T Consensus 164 ~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DR 243 (641)
T KOG0772|consen 164 KHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDR 243 (641)
T ss_pred cCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEcc
Confidence 45556666655555444444443 2333322 11 123344344444 222 677788666655555555432
Q ss_pred cCCCCCceeeee----------eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC-CceeEeeEEecCCc
Q psy14552 142 HPETGILDECSE----------TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ-DCLKQKNLQGLPDL 210 (290)
Q Consensus 142 ~~~~~~l~~~~~----------~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~-~~l~~~~~~~L~~~ 210 (290)
+- ..+.++.+ +.---.++.|-+..|.. +..||-++ .||++++|.++.. +.+++++...-+..
T Consensus 244 dG--~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~----k~~FlT~s-~DgtlRiWdv~~~k~q~qVik~k~~~g~ 316 (641)
T KOG0772|consen 244 DG--FEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN----KEEFLTCS-YDGTLRIWDVNNTKSQLQVIKTKPAGGK 316 (641)
T ss_pred CC--ceeeeeeccchhhhhhhccCCceeeeeccccccCc----ccceEEec-CCCcEEEEecCCchhheeEEeeccCCCc
Confidence 21 11222211 00012356677776653 34555443 5999999998643 45777765554433
Q ss_pred ceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEE
Q psy14552 211 AESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 211 p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
......+.++. +++. +-.|-.||.+--+..
T Consensus 317 Rv~~tsC~~nr--------------dg~~-iAagc~DGSIQ~W~~ 346 (641)
T KOG0772|consen 317 RVPVTSCAWNR--------------DGKL-IAAGCLDGSIQIWDK 346 (641)
T ss_pred ccCceeeecCC--------------Ccch-hhhcccCCceeeeec
Confidence 23333444432 2344 677888888876653
No 78
>KOG0296|consensus
Probab=83.59 E-value=43 Score=32.18 Aligned_cols=148 Identities=15% Similarity=0.292 Sum_probs=81.1
Q ss_pred EEEEeecCceEEEEeeCCeEEEEEecC-CCceec--CCCce-EEEEEeC--CCEEEEEEeCCeEEEEEEcCCCCCceeee
Q psy14552 79 IVRCAVNQRQIVIALQGGRLIYFEMHP-VSDKKE--SDKKK-IVRCAVN--QRQIVIALQGGRLIYFEMHPETGILDECS 152 (290)
Q Consensus 79 Iv~as~n~~qv~ial~~g~i~~~~~~~-~~~~~~--~~~~~-Ii~as~~--~~~l~Val~~~~i~~l~l~~~~~~l~~~~ 152 (290)
+-+++.+.++-++|..+|.=.-|-.+. .++|.- +.++. +++|+-+ +..+|-|--++.|.++.... +. +
T Consensus 67 vFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st--g~--~-- 140 (399)
T KOG0296|consen 67 VFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST--GG--E-- 140 (399)
T ss_pred eEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEccc--Cc--e--
Confidence 445666666667777666433332221 233322 33333 4555443 33455554578899998765 32 1
Q ss_pred eeeecC---cceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCC
Q psy14552 153 ETIQME---SEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDE 229 (290)
Q Consensus 153 ~~~~l~---~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~ 229 (290)
..++. .+|.=+.-. ++..+|+.|..||++..|+++.........- ...| +.+| .+.
T Consensus 141 -~~~~~~e~~dieWl~WH------p~a~illAG~~DGsvWmw~ip~~~~~kv~~G---h~~~-----ct~G------~f~ 199 (399)
T KOG0296|consen 141 -QWKLDQEVEDIEWLKWH------PRAHILLAGSTDGSVWMWQIPSQALCKVMSG---HNSP-----CTCG------EFI 199 (399)
T ss_pred -EEEeecccCceEEEEec------ccccEEEeecCCCcEEEEECCCcceeeEecC---CCCC-----cccc------ccc
Confidence 22332 344444443 3578999999999999999975321111110 1111 1111 122
Q ss_pred CCCCccCCceEEEEEecCceEEEEEEeCCCCc
Q psy14552 230 PAGPVTLGNLYLYVGLQNGALLRMVVDQTSGD 261 (290)
Q Consensus 230 ~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~ 261 (290)
| .++. ++.|--||.++-+ ++.+|+
T Consensus 200 p-----dGKr-~~tgy~dgti~~W--n~ktg~ 223 (399)
T KOG0296|consen 200 P-----DGKR-ILTGYDDGTIIVW--NPKTGQ 223 (399)
T ss_pred C-----CCce-EEEEecCceEEEE--ecCCCc
Confidence 2 2443 8999999999877 566663
No 79
>KOG1332|consensus
Probab=83.14 E-value=19 Score=32.97 Aligned_cols=64 Identities=16% Similarity=0.230 Sum_probs=42.5
Q ss_pred EEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC
Q psy14552 127 IVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ 196 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~ 196 (290)
++=+..|+.+++..-.. +...+.-+......++-+++..|-+ +...|++|..||.|.++..+.+
T Consensus 73 LAScsYDgkVIiWke~~--g~w~k~~e~~~h~~SVNsV~waphe----ygl~LacasSDG~vsvl~~~~~ 136 (299)
T KOG1332|consen 73 LASCSYDGKVIIWKEEN--GRWTKAYEHAAHSASVNSVAWAPHE----YGLLLACASSDGKVSVLTYDSS 136 (299)
T ss_pred eeEeecCceEEEEecCC--Cchhhhhhhhhhcccceeecccccc----cceEEEEeeCCCcEEEEEEcCC
Confidence 44333488888775432 4443332222356677777776543 6789999999999999998765
No 80
>KOG0299|consensus
Probab=83.03 E-value=17 Score=35.81 Aligned_cols=145 Identities=14% Similarity=0.171 Sum_probs=76.6
Q ss_pred EEEEeec-CceEEEEeeCCeEEEEEecCCCceec-CCCceEEEE-E--eCCCEEEEEEeCCeEEEEEEcCCCCCceeeee
Q psy14552 79 IVRCAVN-QRQIVIALQGGRLIYFEMHPVSDKKE-SDKKKIVRC-A--VNQRQIVIALQGGRLIYFEMHPETGILDECSE 153 (290)
Q Consensus 79 Iv~as~n-~~qv~ial~~g~i~~~~~~~~~~~~~-~~~~~Ii~a-s--~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~ 153 (290)
+..|-.+ ..|++..=.+..++.+.++...-... +.++..|.+ + .+.+++..++.|.++.+.++++. . ..+.+
T Consensus 206 l~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~-s-~vetl- 282 (479)
T KOG0299|consen 206 LTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL-S-YVETL- 282 (479)
T ss_pred EEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh-H-HHHHH-
Confidence 4444444 44444333333444554432211111 234444444 2 45566888878999999988862 1 11211
Q ss_pred eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCC
Q psy14552 154 TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233 (290)
Q Consensus 154 ~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~ 233 (290)
.--+..|.-++.. + +...+.||--|.++++|++++++.|.-. ....-+..+++++
T Consensus 283 -yGHqd~v~~IdaL--~----reR~vtVGgrDrT~rlwKi~eesqlifr---g~~~sidcv~~In--------------- 337 (479)
T KOG0299|consen 283 -YGHQDGVLGIDAL--S----RERCVTVGGRDRTVRLWKIPEESQLIFR---GGEGSIDCVAFIN--------------- 337 (479)
T ss_pred -hCCccceeeechh--c----ccceEEeccccceeEEEeccccceeeee---CCCCCeeeEEEec---------------
Confidence 1234455444433 2 4678889989999999999654333222 1123455555553
Q ss_pred ccCCceEEEEEecCceEEEEEE
Q psy14552 234 VTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 234 ~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
...+..|-.||.+.=+.+
T Consensus 338 ----~~HfvsGSdnG~IaLWs~ 355 (479)
T KOG0299|consen 338 ----DEHFVSGSDNGSIALWSL 355 (479)
T ss_pred ----ccceeeccCCceEEEeee
Confidence 223566777777665544
No 81
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=83.00 E-value=4.3 Score=24.75 Aligned_cols=30 Identities=33% Similarity=0.460 Sum_probs=24.5
Q ss_pred cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEE
Q psy14552 157 MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLIS 192 (290)
Q Consensus 157 l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~ 192 (290)
-...|.++++.+. ..+++.|..|+.+.+|+
T Consensus 10 h~~~i~~i~~~~~------~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 10 HSSSINSIAWSPD------GNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SSSSEEEEEEETT------SSEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEEecc------cccceeeCCCCEEEEEC
Confidence 3567888988753 57999999999999985
No 82
>KOG0772|consensus
Probab=82.87 E-value=25 Score=35.31 Aligned_cols=116 Identities=14% Similarity=0.214 Sum_probs=63.2
Q ss_pred cCCCCCceEEEE--eecCceEEEEeeCCeEEEEEecCCCceec--------------CCCceEEEE-E---eCCCEEEEE
Q psy14552 71 KKESDKKKIVRC--AVNQRQIVIALQGGRLIYFEMHPVSDKKE--------------SDKKKIVRC-A---VNQRQIVIA 130 (290)
Q Consensus 71 ~~~~~~~~Iv~a--s~n~~qv~ial~~g~i~~~~~~~~~~~~~--------------~~~~~Ii~a-s---~~~~~l~Va 130 (290)
+.|-++-.|.+. +.+..|++++..+.+...|.-+ ..+|.+ ..++..++| + .+..+++-+
T Consensus 209 l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRd-G~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~ 287 (641)
T KOG0772|consen 209 LQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRD-GFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTC 287 (641)
T ss_pred cCcccccccceeeecCCCCeEEEEecCcceeEEccC-CceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEe
Confidence 334444444443 4557788877777666655321 123322 122222444 2 233445555
Q ss_pred EeCCeEEEEEEcCCCCCceeeeeeee---cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 131 LQGGRLIYFEMHPETGILDECSETIQ---MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 131 l~~~~i~~l~l~~~~~~l~~~~~~~~---l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
..|+++++..++....++ ++.++.. ..-.++..++.+. .+.++.|+.||+|.+|...
T Consensus 288 s~DgtlRiWdv~~~k~q~-qVik~k~~~g~Rv~~tsC~~nrd------g~~iAagc~DGSIQ~W~~~ 347 (641)
T KOG0772|consen 288 SYDGTLRIWDVNNTKSQL-QVIKTKPAGGKRVPVTSCAWNRD------GKLIAAGCLDGSIQIWDKG 347 (641)
T ss_pred cCCCcEEEEecCCchhhe-eEEeeccCCCcccCceeeecCCC------cchhhhcccCCceeeeecC
Confidence 569999999988621233 2233332 1223444445432 3569999999999999863
No 83
>KOG1240|consensus
Probab=82.85 E-value=68 Score=35.61 Aligned_cols=120 Identities=12% Similarity=0.029 Sum_probs=69.0
Q ss_pred EEEEeCCCEEEEEEeCCeEEEEEEcCCCC-Cce-eeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 118 VRCAVNQRQIVIALQGGRLIYFEMHPETG-ILD-ECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 118 i~as~~~~~l~Val~~~~i~~l~l~~~~~-~l~-~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
++...++.++|||..||.|+++.++.... ... ..........+-..+++...... .++..|+.++..+.++.|..-.
T Consensus 1104 vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~-~~S~~lvy~T~~~~iv~~D~r~ 1182 (1431)
T KOG1240|consen 1104 VTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAI-VQSHVLVYATDLSRIVSWDTRM 1182 (1431)
T ss_pred EEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeeccccc-ccceeEEEEEeccceEEecchh
Confidence 44456788899999999999999986111 110 00111223344445555544322 2346888888878778776542
Q ss_pred CCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEe
Q psy14552 196 QDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 196 ~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
...+-..+-+.-.....|+++-. ....+.+|+..|.++=+.+.
T Consensus 1183 ~~~~w~lk~~~~hG~vTSi~idp------------------~~~WlviGts~G~l~lWDLR 1225 (1431)
T KOG1240|consen 1183 RHDAWRLKNQLRHGLVTSIVIDP------------------WCNWLVIGTSRGQLVLWDLR 1225 (1431)
T ss_pred hhhHHhhhcCccccceeEEEecC------------------CceEEEEecCCceEEEEEee
Confidence 22222221111113456666553 34479999999999876653
No 84
>KOG1645|consensus
Probab=82.74 E-value=5.1 Score=38.81 Aligned_cols=65 Identities=22% Similarity=0.182 Sum_probs=48.0
Q ss_pred EEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 178 FLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 178 ~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
.+..+.-+..+-++++.. -..+.....+..+-|.+... +...++|+|+.||.++-|.+..
T Consensus 208 Ll~~asl~nkiki~dlet---~~~vssy~a~~~~wSC~wDl-----------------de~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 208 LLGLASLGNKIKIMDLET---SCVVSSYIAYNQIWSCCWDL-----------------DERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred eeeeeccCceEEEEeccc---ceeeeheeccCCceeeeecc-----------------CCcceeEEeccCceEEEEEccC
Confidence 566666688888888863 34444556677788887764 3467899999999999999976
Q ss_pred CCCcc
Q psy14552 258 TSGDL 262 (290)
Q Consensus 258 ~~~~l 262 (290)
.++.+
T Consensus 268 ~~~~~ 272 (463)
T KOG1645|consen 268 PEGPL 272 (463)
T ss_pred CCchH
Confidence 66643
No 85
>KOG0268|consensus
Probab=82.39 E-value=4.7 Score=38.61 Aligned_cols=63 Identities=22% Similarity=0.351 Sum_probs=40.8
Q ss_pred EEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 126 QIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 126 ~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
.++-|..|.+|++|..+. +.--++--+.-|. .+.|+.... .+.|++.|..||.|+.|+-...+
T Consensus 286 EfvsgsyDksIRIf~~~~--~~SRdiYhtkRMq-~V~~Vk~S~------Dskyi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 286 EFVSGSYDKSIRIFPVNH--GHSRDIYHTKRMQ-HVFCVKYSM------DSKYIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred hhccccccceEEEeecCC--CcchhhhhHhhhh-eeeEEEEec------cccEEEecCCCcceeeeecchhh
Confidence 366666688899988775 2111211111232 477777763 37899999999999999876443
No 86
>KOG0306|consensus
Probab=82.21 E-value=71 Score=33.65 Aligned_cols=114 Identities=20% Similarity=0.271 Sum_probs=70.1
Q ss_pred eCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC-C-ce
Q psy14552 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ-D-CL 199 (290)
Q Consensus 122 ~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~-~-~l 199 (290)
.+..++++|..+|.+.+|++.. ..+.|.. ..-+..|=.+++.+. ...++-|..|.+|..|.+.-. + .=
T Consensus 422 pgd~~Iv~G~k~Gel~vfdlaS--~~l~Eti--~AHdgaIWsi~~~pD------~~g~vT~saDktVkfWdf~l~~~~~g 491 (888)
T KOG0306|consen 422 PGDRYIVLGTKNGELQVFDLAS--ASLVETI--RAHDGAIWSISLSPD------NKGFVTGSADKTVKFWDFKLVVSVPG 491 (888)
T ss_pred CCCceEEEeccCCceEEEEeeh--hhhhhhh--hccccceeeeeecCC------CCceEEecCCcEEEEEeEEEEeccCc
Confidence 4566799999999999999875 2333321 122344545555433 456778888999999986410 0 00
Q ss_pred eEeeEEecC-----CcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCC
Q psy14552 200 KQKNLQGLP-----DLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG 260 (290)
Q Consensus 200 ~~~~~~~L~-----~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~ 260 (290)
+..+...|- .++..++.+..- ...-||-+||=|-.+--|-+|....
T Consensus 492 t~~k~lsl~~~rtLel~ddvL~v~~S---------------pdgk~LaVsLLdnTVkVyflDtlKF 542 (888)
T KOG0306|consen 492 TQKKVLSLKHTRTLELEDDVLCVSVS---------------PDGKLLAVSLLDNTVKVYFLDTLKF 542 (888)
T ss_pred ccceeeeeccceEEeccccEEEEEEc---------------CCCcEEEEEeccCeEEEEEecceee
Confidence 011111111 256667777652 2245799999999999998887544
No 87
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=81.87 E-value=35 Score=29.85 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=63.1
Q ss_pred EeCCCEEEEEEe-CCeEEEEEEcCCCCCceeeeeeeec------Cc--ceeEEEeeeCCCCCccccEEEEEeC-CCeEEE
Q psy14552 121 AVNQRQIVIALQ-GGRLIYFEMHPETGILDECSETIQM------ES--EVLCMALSNAPSGEQMSRFLAVGLA-DNTVRL 190 (290)
Q Consensus 121 s~~~~~l~Val~-~~~i~~l~l~~~~~~l~~~~~~~~l------~~--ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v~i 190 (290)
+.++..++++.. ++.++++.+.. +.. ...+.. +. .+..+.+.+ ...+++++.. ++.+.+
T Consensus 165 s~dg~~l~~~~~~~~~v~i~d~~~--~~~---~~~~~~~~~~~~~~~~~~~~i~~s~------dg~~~~~~~~~~~~i~v 233 (300)
T TIGR03866 165 TADGKELWVSSEIGGTVSVIDVAT--RKV---IKKITFEIPGVHPEAVQPVGIKLTK------DGKTAFVALGPANRVAV 233 (300)
T ss_pred CCCCCEEEEEcCCCCEEEEEEcCc--cee---eeeeeecccccccccCCccceEECC------CCCEEEEEcCCCCeEEE
Confidence 455566666653 78888887764 221 111111 01 122333432 1345666654 677888
Q ss_pred EEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEec-CceEEEEEEeCCCCcccccceEE
Q psy14552 191 ISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQ-NGALLRMVVDQTSGDLSDNRMRY 269 (290)
Q Consensus 191 ~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~-dG~l~~~~~d~~~~~l~~~~~~~ 269 (290)
|.+... +..+....+..|.++.... .+ .+|+++-+ +|.+..|.+ .+++.. +...
T Consensus 234 ~d~~~~---~~~~~~~~~~~~~~~~~~~-----------------~g-~~l~~~~~~~~~i~v~d~--~~~~~~--~~~~ 288 (300)
T TIGR03866 234 VDAKTY---EVLDYLLVGQRVWQLAFTP-----------------DE-KYLLTTNGVSNDVSVIDV--AALKVI--KSIK 288 (300)
T ss_pred EECCCC---cEEEEEEeCCCcceEEECC-----------------CC-CEEEEEcCCCCeEEEEEC--CCCcEE--EEEE
Confidence 887532 2222223344566554331 22 35888754 899887755 445432 3456
Q ss_pred ecCcceEE
Q psy14552 270 LGSRPVKL 277 (290)
Q Consensus 270 lG~~pv~l 277 (290)
+|..|=.+
T Consensus 289 ~~~~~~~~ 296 (300)
T TIGR03866 289 VGRLPWGV 296 (300)
T ss_pred ccccccee
Confidence 77776433
No 88
>KOG0278|consensus
Probab=81.81 E-value=21 Score=32.89 Aligned_cols=137 Identities=15% Similarity=0.222 Sum_probs=74.7
Q ss_pred CCCeEEEEe-cCCeEEEeec--CcceeeeccCCCCCceEEEEeec-CceEEEEeeCCeEEEEEecCCCc---eecCCCce
Q psy14552 44 GDNSIVQVY-PDGIRHIGAK--NTTWKVSDKKESDKKKIVRCAVN-QRQIVIALQGGRLIYFEMHPVSD---KKESDKKK 116 (290)
Q Consensus 44 ~~~~ivQVt-~~~v~l~~~~--~~~~~~~~~~~~~~~~Iv~as~n-~~qv~ial~~g~i~~~~~~~~~~---~~~~~~~~ 116 (290)
.|..|+--+ ...|||-|.. +...++.. ..++.++-.. +..++...-++.|.|.+.+...- ...|..
T Consensus 154 eD~~iLSSadd~tVRLWD~rTgt~v~sL~~-----~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~n-- 226 (334)
T KOG0278|consen 154 EDKCILSSADDKTVRLWDHRTGTEVQSLEF-----NSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCN-- 226 (334)
T ss_pred cCceEEeeccCCceEEEEeccCcEEEEEec-----CCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccc--
Confidence 345566533 5568876643 22222221 2233344333 44444444677788777654332 233443
Q ss_pred EEEEEe--CCCEEEEEEeCCeEEEEEEcCCCCCceeeee-eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 117 IVRCAV--NQRQIVIALQGGRLIYFEMHPETGILDECSE-TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 117 Ii~as~--~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~-~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
+.+|+- +....+.|-.|..++-|..+. +. ++-. ...-+.-|-|+.+.|. -...+.|..||+|++|..
T Consensus 227 V~SASL~P~k~~fVaGged~~~~kfDy~T--ge--Ei~~~nkgh~gpVhcVrFSPd------GE~yAsGSEDGTirlWQt 296 (334)
T KOG0278|consen 227 VESASLHPKKEFFVAGGEDFKVYKFDYNT--GE--EIGSYNKGHFGPVHCVRFSPD------GELYASGSEDGTIRLWQT 296 (334)
T ss_pred cccccccCCCceEEecCcceEEEEEeccC--Cc--eeeecccCCCCceEEEEECCC------CceeeccCCCceEEEEEe
Confidence 445543 333344443456666665553 32 3211 1235678999999864 356779999999999998
Q ss_pred CCCC
Q psy14552 194 APQD 197 (290)
Q Consensus 194 ~~~~ 197 (290)
.+..
T Consensus 297 ~~~~ 300 (334)
T KOG0278|consen 297 TPGK 300 (334)
T ss_pred cCCC
Confidence 7643
No 89
>KOG2321|consensus
Probab=80.92 E-value=12 Score=37.85 Aligned_cols=103 Identities=11% Similarity=0.263 Sum_probs=60.7
Q ss_pred ceEEEEeeCCeEEEEEecCCCceecCCCce---EEEEEeCCCE--EEEEEeCCeEEEEEEcCCC--CCceeeeeee-ecC
Q psy14552 87 RQIVIALQGGRLIYFEMHPVSDKKESDKKK---IVRCAVNQRQ--IVIALQGGRLIYFEMHPET--GILDECSETI-QME 158 (290)
Q Consensus 87 ~qv~ial~~g~i~~~~~~~~~~~~~~~~~~---Ii~as~~~~~--l~Val~~~~i~~l~l~~~~--~~l~~~~~~~-~l~ 158 (290)
+-+.++-++.+|+=|.++ -+.|..|-... +-+|+.|... +++|..++.+.++.....+ +.| +...++ +.|
T Consensus 146 cDly~~gsg~evYRlNLE-qGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l-~~~~~v~s~p 223 (703)
T KOG2321|consen 146 CDLYLVGSGSEVYRLNLE-QGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTL-DAASSVNSHP 223 (703)
T ss_pred ccEEEeecCcceEEEEcc-ccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheee-ecccccCCCc
Confidence 345566677788777775 45666553322 4555666433 6777668888776433210 111 100011 123
Q ss_pred c-----ceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 159 S-----EVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 159 ~-----ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
. +|+.++|.+. ...++||+.+|.+++|.|-...
T Consensus 224 g~~~~~svTal~F~d~------gL~~aVGts~G~v~iyDLRa~~ 261 (703)
T KOG2321|consen 224 GGDAAPSVTALKFRDD------GLHVAVGTSTGSVLIYDLRASK 261 (703)
T ss_pred cccccCcceEEEecCC------ceeEEeeccCCcEEEEEcccCC
Confidence 3 3888888632 5789999999999999986443
No 90
>KOG3621|consensus
Probab=79.96 E-value=19 Score=37.20 Aligned_cols=115 Identities=16% Similarity=0.211 Sum_probs=72.5
Q ss_pred CCCceEEEEeecCceEEEEeeCCeEEEEEecCCC-ceecCC--CceEEEEEeC--CCEEEEEEeCCeEEEEEEcCC-CCC
Q psy14552 74 SDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVS-DKKESD--KKKIVRCAVN--QRQIVIALQGGRLIYFEMHPE-TGI 147 (290)
Q Consensus 74 ~~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~-~~~~~~--~~~Ii~as~~--~~~l~Val~~~~i~~l~l~~~-~~~ 147 (290)
|......+.++++.|+.++.+-|.++.|.-.... .....+ ...+++++.+ ...+|.|+.++.|.++.+... ...
T Consensus 33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~ 112 (726)
T KOG3621|consen 33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRD 112 (726)
T ss_pred cceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCc
Confidence 5566778899999999999999988777432111 011111 1223344433 333666667888888876641 011
Q ss_pred ceeeeeeeec--CcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 148 LDECSETIQM--ESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 148 l~~~~~~~~l--~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+.- ..+... +..|+|++..+. ...++.|-..|.|...+|+-
T Consensus 113 ~~~-~t~~d~~~~~rVTal~Ws~~------~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 113 LDY-VTPCDKSHKCRVTALEWSKN------GMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cee-eccccccCCceEEEEEeccc------ccEEeecCCCceEEEEEech
Confidence 111 122233 789999998642 57899999999999888874
No 91
>KOG1538|consensus
Probab=79.53 E-value=42 Score=34.97 Aligned_cols=110 Identities=16% Similarity=0.225 Sum_probs=63.3
Q ss_pred EEEEE-eC-CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeec---Cc-ceeEEEeeeCCCCCccccEEEEEeCCCeEEE
Q psy14552 117 IVRCA-VN-QRQIVIALQGGRLIYFEMHPETGILDECSETIQM---ES-EVLCMALSNAPSGEQMSRFLAVGLADNTVRL 190 (290)
Q Consensus 117 Ii~as-~~-~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l---~~-ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i 190 (290)
+.+|+ .| +..+++|..+|+|.+-.-. +. +. .+++- |. .|=.+.+.+.+ +.-....++|.-|+.++..
T Consensus 135 ~~~CsWtnDGqylalG~~nGTIsiRNk~---gE--ek-~~I~Rpgg~Nspiwsi~~~p~s-g~G~~di~aV~DW~qTLSF 207 (1081)
T KOG1538|consen 135 IICCSWTNDGQYLALGMFNGTISIRNKN---GE--EK-VKIERPGGSNSPIWSICWNPSS-GEGRNDILAVADWGQTLSF 207 (1081)
T ss_pred EEEeeecCCCcEEEEeccCceEEeecCC---CC--cc-eEEeCCCCCCCCceEEEecCCC-CCCccceEEEEeccceeEE
Confidence 45553 33 5559999999988664211 11 11 11221 22 33344554432 2225689999999999999
Q ss_pred EEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEE
Q psy14552 191 ISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMV 254 (290)
Q Consensus 191 ~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~ 254 (290)
|+|+.. ..-+...|+--|.-+... .+.-|+++|=-||.|--|+
T Consensus 208 y~LsG~---~Igk~r~L~FdP~CisYf------------------~NGEy~LiGGsdk~L~~fT 250 (1081)
T KOG1538|consen 208 YQLSGK---QIGKDRALNFDPCCISYF------------------TNGEYILLGGSDKQLSLFT 250 (1081)
T ss_pred EEecce---eecccccCCCCchhheec------------------cCCcEEEEccCCCceEEEe
Confidence 999742 222334566666555433 3445677777776666664
No 92
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=79.43 E-value=59 Score=30.95 Aligned_cols=135 Identities=14% Similarity=0.165 Sum_probs=71.3
Q ss_pred cCceEEEEeeCCeEEEEEecCC-CceecCCCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcc-ee
Q psy14552 85 NQRQIVIALQGGRLIYFEMHPV-SDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESE-VL 162 (290)
Q Consensus 85 n~~qv~ial~~g~i~~~~~~~~-~~~~~~~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~e-i~ 162 (290)
.+..+.+...+|.+..+..... ..|..+.+.. ......+..+.++..++.++.++... +. +..+...+... .+
T Consensus 255 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~~~~~~vy~~~~~g~l~ald~~t--G~--~~W~~~~~~~~~~~ 329 (394)
T PRK11138 255 VGGVVYALAYNGNLVALDLRSGQIVWKREYGSV-NDFAVDGGRIYLVDQNDRVYALDTRG--GV--ELWSQSDLLHRLLT 329 (394)
T ss_pred ECCEEEEEEcCCeEEEEECCCCCEEEeecCCCc-cCcEEECCEEEEEcCCCeEEEEECCC--Cc--EEEcccccCCCccc
Confidence 3566767777788887776533 2476532210 11123345667776788888877653 43 22111111111 11
Q ss_pred EEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCC--cceEEEEEEecCCCCCCCCCCCCCccCCceE
Q psy14552 163 CMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPD--LAESLVMIEMGASDPTSSDEPAGPVTLGNLY 240 (290)
Q Consensus 163 ~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~--~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
...+ ...+++++..||.++.+..+.. +.+.+..++. ...+-++. +. .
T Consensus 330 sp~v--------~~g~l~v~~~~G~l~~ld~~tG---~~~~~~~~~~~~~~s~P~~~-------------------~~-~ 378 (394)
T PRK11138 330 APVL--------YNGYLVVGDSEGYLHWINREDG---RFVAQQKVDSSGFLSEPVVA-------------------DD-K 378 (394)
T ss_pred CCEE--------ECCEEEEEeCCCEEEEEECCCC---CEEEEEEcCCCcceeCCEEE-------------------CC-E
Confidence 1111 1357889999998887665422 2233333321 22222222 22 4
Q ss_pred EEEEecCceEEEEEE
Q psy14552 241 LYVGLQNGALLRMVV 255 (290)
Q Consensus 241 L~iGl~dG~l~~~~~ 255 (290)
||++.+||.|+.|+.
T Consensus 379 l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 379 LLIQARDGTVYAITR 393 (394)
T ss_pred EEEEeCCceEEEEeC
Confidence 999999999998763
No 93
>KOG1274|consensus
Probab=78.14 E-value=1e+02 Score=33.04 Aligned_cols=152 Identities=14% Similarity=0.132 Sum_probs=82.8
Q ss_pred EEEEeecCceEEEEeeCCeEEEEEecCCCc-eecCCCceEEEE---EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeee
Q psy14552 79 IVRCAVNQRQIVIALQGGRLIYFEMHPVSD-KKESDKKKIVRC---AVNQRQIVIALQGGRLIYFEMHPETGILDECSET 154 (290)
Q Consensus 79 Iv~as~n~~qv~ial~~g~i~~~~~~~~~~-~~~~~~~~Ii~a---s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~ 154 (290)
.++.+.++.+++.+-++-.|..+++++... .....+..=+.| +.++..+|++.-||.+.++++++ +.+...+..
T Consensus 101 ~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~--~~~~~tl~~ 178 (933)
T KOG1274|consen 101 DLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQD--GILSKTLTG 178 (933)
T ss_pred EEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEccc--chhhhhccc
Confidence 344444456888777777888888765432 222111111333 45667789988899999999986 322221111
Q ss_pred e----ecC-cce-eEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCC
Q psy14552 155 I----QME-SEV-LCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSD 228 (290)
Q Consensus 155 ~----~l~-~ei-~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~ 228 (290)
+ ... .+| .-++..|. +..++ +-.-|+.|.+|+-+.-+.+..++..... .-+..+.+.
T Consensus 179 v~k~n~~~~s~i~~~~aW~Pk-----~g~la-~~~~d~~Vkvy~r~~we~~f~Lr~~~~s---s~~~~~~ws-------- 241 (933)
T KOG1274|consen 179 VDKDNEFILSRICTRLAWHPK-----GGTLA-VPPVDNTVKVYSRKGWELQFKLRDKLSS---SKFSDLQWS-------- 241 (933)
T ss_pred CCccccccccceeeeeeecCC-----CCeEE-eeccCCeEEEEccCCceeheeecccccc---cceEEEEEc--------
Confidence 1 111 222 22333322 13444 4445788888886532212222111111 115555542
Q ss_pred CCCCCccCCceEEEEEecCceEEEEEEe
Q psy14552 229 EPAGPVTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 229 ~~~~~~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
-...||-.|..||.++-|.++
T Consensus 242 -------PnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 242 -------PNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred -------CCCcEEeeeccCCcEEEEecc
Confidence 235689999999999999887
No 94
>KOG1188|consensus
Probab=78.11 E-value=65 Score=30.76 Aligned_cols=183 Identities=10% Similarity=0.131 Sum_probs=100.6
Q ss_pred EEEecCCeEEEeecCcceeeecc-CCCCCceEEEEee--cCceEEEEeeCCeEEEEEecCC-----CceecCCCceEEEE
Q psy14552 49 VQVYPDGIRHIGAKNTTWKVSDK-KESDKKKIVRCAV--NQRQIVIALQGGRLIYFEMHPV-----SDKKESDKKKIVRC 120 (290)
Q Consensus 49 vQVt~~~v~l~~~~~~~~~~~~~-~~~~~~~Iv~as~--n~~qv~ial~~g~i~~~~~~~~-----~~~~~~~~~~Ii~a 120 (290)
+=....+||+++..+..+ +... -+|+-...+.-.. ...-|..+.++|.|-.+-+... ..|....+.-.++-
T Consensus 45 v~lSngsv~lyd~~tg~~-l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~l 123 (376)
T KOG1188|consen 45 VSLSNGSVRLYDKGTGQL-LEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICL 123 (376)
T ss_pred EEecCCeEEEEeccchhh-hheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEe
Confidence 333456788887664211 1222 2444333443333 3455666778899988876432 23544232223333
Q ss_pred Ee--CCCEEEEEEe----CCeEEEEEEcCCCCC-ceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 121 AV--NQRQIVIALQ----GGRLIYFEMHPETGI-LDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 121 s~--~~~~l~Val~----~~~i~~l~l~~~~~~-l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
+. ++..++.|+. +..++++.+... .+ +-... -+-...|+++.|.|.+ ...|+-|.-||.+-+|.+
T Consensus 124 d~nck~~ii~~GtE~~~s~A~v~lwDvR~~-qq~l~~~~--eSH~DDVT~lrFHP~~-----pnlLlSGSvDGLvnlfD~ 195 (376)
T KOG1188|consen 124 DLNCKKNIIACGTELTRSDASVVLWDVRSE-QQLLRQLN--ESHNDDVTQLRFHPSD-----PNLLLSGSVDGLVNLFDT 195 (376)
T ss_pred eccCcCCeEEeccccccCceEEEEEEeccc-cchhhhhh--hhccCcceeEEecCCC-----CCeEEeecccceEEeeec
Confidence 54 4555777652 445666666542 22 11111 1235689999998763 678999999999999998
Q ss_pred CCCC---ceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCC
Q psy14552 194 APQD---CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTS 259 (290)
Q Consensus 194 ~~~~---~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~ 259 (290)
..+. .|..+ -....|+..+.+.++ +--.++|=+-.+.+.-|++...+
T Consensus 196 ~~d~EeDaL~~v-----iN~~sSI~~igw~~~--------------~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 196 KKDNEEDALLHV-----INHGSSIHLIGWLSK--------------KYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred CCCcchhhHHHh-----hcccceeeeeeeecC--------------CcceEEEEEccCceeEEEccCCC
Confidence 6532 12111 012345666655322 11127777777777777775444
No 95
>KOG0279|consensus
Probab=78.10 E-value=59 Score=30.27 Aligned_cols=65 Identities=22% Similarity=0.291 Sum_probs=45.9
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeee--c-CcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ--M-ESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~--l-~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+.++.|++-|..|.+|-+...-. ++.-++. . ..=|+|+.|.|.. ..++++-+.||++|.+|.++.
T Consensus 114 s~dn~qivSGSrDkTiklwnt~g------~ck~t~~~~~~~~WVscvrfsP~~----~~p~Ivs~s~DktvKvWnl~~ 181 (315)
T KOG0279|consen 114 STDNRQIVSGSRDKTIKLWNTLG------VCKYTIHEDSHREWVSCVRFSPNE----SNPIIVSASWDKTVKVWNLRN 181 (315)
T ss_pred cCCCceeecCCCcceeeeeeecc------cEEEEEecCCCcCcEEEEEEcCCC----CCcEEEEccCCceEEEEccCC
Confidence 56678888888899888765432 1110111 2 3348999998764 468999999999999999974
No 96
>KOG1332|consensus
Probab=77.86 E-value=47 Score=30.50 Aligned_cols=114 Identities=14% Similarity=0.143 Sum_probs=64.1
Q ss_pred eCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCcee
Q psy14552 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200 (290)
Q Consensus 122 ~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~ 200 (290)
.-+.+++-+++|++|++|+..++ +....+ ..+. -..-+-=+..... +.-.+|+-..+||.|.+|+-. ++..+
T Consensus 21 yygkrlATcsSD~tVkIf~v~~n-~~s~ll-~~L~Gh~GPVwqv~wahP----k~G~iLAScsYDgkVIiWke~-~g~w~ 93 (299)
T KOG1332|consen 21 YYGKRLATCSSDGTVKIFEVRNN-GQSKLL-AELTGHSGPVWKVAWAHP----KFGTILASCSYDGKVIIWKEE-NGRWT 93 (299)
T ss_pred hhcceeeeecCCccEEEEEEcCC-CCceee-eEecCCCCCeeEEeeccc----ccCcEeeEeecCceEEEEecC-CCchh
Confidence 44667888889999999999874 432121 1221 1122222333222 134678888889999999943 22222
Q ss_pred EeeE-EecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCC
Q psy14552 201 QKNL-QGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQT 258 (290)
Q Consensus 201 ~~~~-~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~ 258 (290)
.... .....--.|+ .. .|+ +..+.|+||-.||.+=-++.+..
T Consensus 94 k~~e~~~h~~SVNsV---~w---------aph----eygl~LacasSDG~vsvl~~~~~ 136 (299)
T KOG1332|consen 94 KAYEHAAHSASVNSV---AW---------APH----EYGLLLACASSDGKVSVLTYDSS 136 (299)
T ss_pred hhhhhhhhcccceee---cc---------ccc----ccceEEEEeeCCCcEEEEEEcCC
Confidence 2111 1111111222 21 122 45677999999999988888765
No 97
>KOG0301|consensus
Probab=77.69 E-value=63 Score=33.56 Aligned_cols=59 Identities=14% Similarity=0.274 Sum_probs=40.1
Q ss_pred CCCEEEEEEe-CCeEEEEEEcCCCCCceeeeeeeecCc-ceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 123 NQRQIVIALQ-GGRLIYFEMHPETGILDECSETIQMES-EVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 123 ~~~~l~Val~-~~~i~~l~l~~~~~~l~~~~~~~~l~~-ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
.+.+++|++. |++++++..+. +.+.+++|. ++=+.+.-. ..-++||..||.|++|+.++
T Consensus 229 ~~~~~Ivs~gEDrtlriW~~~e-------~~q~I~lPttsiWsa~~L~-------NgDIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 229 LSDGLIVSTGEDRTLRIWKKDE-------CVQVITLPTTSIWSAKVLL-------NGDIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred CCCCeEEEecCCceEEEeecCc-------eEEEEecCccceEEEEEee-------CCCEEEeccCceEEEEEecc
Confidence 3455677764 88999987653 234566776 554544432 23488999999999999874
No 98
>KOG1445|consensus
Probab=77.14 E-value=6.1 Score=40.53 Aligned_cols=103 Identities=18% Similarity=0.380 Sum_probs=65.5
Q ss_pred eecCceEEEEee--CCeEEEEEecCCCceecCCCc--eEEEE----E-----eCCCEEEEEEeCCeEEEEEEcCCCCCce
Q psy14552 83 AVNQRQIVIALQ--GGRLIYFEMHPVSDKKESDKK--KIVRC----A-----VNQRQIVIALQGGRLIYFEMHPETGILD 149 (290)
Q Consensus 83 s~n~~qv~ial~--~g~i~~~~~~~~~~~~~~~~~--~Ii~a----s-----~~~~~l~Val~~~~i~~l~l~~~~~~l~ 149 (290)
.+|+..+++-|+ +|.|-.||+++-+.+ |++. .+... + -+..+++||+.|+.|.+..+..+ + +.
T Consensus 588 can~~rvAVPL~g~gG~iai~el~~PGrL--PDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~-g-l~ 663 (1012)
T KOG1445|consen 588 CANNKRVAVPLAGSGGVIAIYELNEPGRL--PDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTAN-G-LP 663 (1012)
T ss_pred eeccceEEEEecCCCceEEEEEcCCCCCC--CcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccC-C-CC
Confidence 345556666555 589999999876654 2221 01111 1 23456999999999999998863 2 33
Q ss_pred eee----eeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 150 ECS----ETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 150 ~~~----~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
+.. +.++ -...|..+.+.+. .+..|+++++|.+|.+|.+.
T Consensus 664 e~~~tPe~~lt~h~eKI~slRfHPL-----AadvLa~asyd~Ti~lWDl~ 708 (1012)
T KOG1445|consen 664 ENEMTPEKILTIHGEKITSLRFHPL-----AADVLAVASYDSTIELWDLA 708 (1012)
T ss_pred cccCCcceeeecccceEEEEEecch-----hhhHhhhhhccceeeeeehh
Confidence 321 1112 2345777777765 36789999999999999874
No 99
>KOG0289|consensus
Probab=76.77 E-value=81 Score=31.13 Aligned_cols=171 Identities=18% Similarity=0.217 Sum_probs=90.5
Q ss_pred ceEEEEEcCCceEEEEe---CCEEEEeecCCccCCCCeEEEEeeCCCeEEEEecCCeEEEe-ecCcceeeeccC------
Q psy14552 3 DAYIVVSFSNATLVLSI---GETVEEVSGSGFYGTTPTLCCSAMGDNSIVQVYPDGIRHIG-AKNTTWKVSDKK------ 72 (290)
Q Consensus 3 ~~ylvlS~~~~T~vl~~---~~~~~e~~~~gf~~~~~Ti~~~~~~~~~ivQVt~~~v~l~~-~~~~~~~~~~~~------ 72 (290)
..|++-+..+.|..|+- |..+..+.+. ++.--+.++. ++|.+..+-. .....-.|||.+
T Consensus 315 geYllsAs~d~~w~Fsd~~~g~~lt~vs~~---~s~v~~ts~~--------fHpDgLifgtgt~d~~vkiwdlks~~~~a 383 (506)
T KOG0289|consen 315 GEYLLSASNDGTWAFSDISSGSQLTVVSDE---TSDVEYTSAA--------FHPDGLIFGTGTPDGVVKIWDLKSQTNVA 383 (506)
T ss_pred CcEEEEecCCceEEEEEccCCcEEEEEeec---cccceeEEee--------EcCCceEEeccCCCceEEEEEcCCccccc
Confidence 35788777788887765 4444444432 2222233333 3444433321 112222333333
Q ss_pred --CCCCceEEEE--eecCceEEEEeeCCeEEEEEecCC---CceecCCCceEEEE--EeCCCEEEEEEeCCeEEEEEEcC
Q psy14552 73 --ESDKKKIVRC--AVNQRQIVIALQGGRLIYFEMHPV---SDKKESDKKKIVRC--AVNQRQIVIALQGGRLIYFEMHP 143 (290)
Q Consensus 73 --~~~~~~Iv~a--s~n~~qv~ial~~g~i~~~~~~~~---~~~~~~~~~~Ii~a--s~~~~~l~Val~~~~i~~l~l~~ 143 (290)
|+-..+|... +-|.=+++++..+|.+.++.+... ..+..+++.++.+- +..+..++++ +..+.++....
T Consensus 384 ~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~--g~~l~Vy~~~k 461 (506)
T KOG0289|consen 384 KFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA--GSDLQVYICKK 461 (506)
T ss_pred cCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEee--cceeEEEEEec
Confidence 2233344444 446778999999999888876432 23334555555333 5566677776 55565554443
Q ss_pred CCCCceeeeeeeec-CcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 144 ETGILDECSETIQM-ESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 144 ~~~~l~~~~~~~~l-~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
.+.+..++. .... ..-..++.|.. ...||+.|.-|..+.+|++
T Consensus 462 ~~k~W~~~~-~~~~~sg~st~v~Fg~------~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 462 KTKSWTEIK-ELADHSGLSTGVRFGE------HAQYLASTSMDAILRLYAL 505 (506)
T ss_pred ccccceeee-hhhhcccccceeeecc------cceEEeeccchhheEEeec
Confidence 223343432 2221 12345666642 3678888877887777765
No 100
>KOG0281|consensus
Probab=75.22 E-value=12 Score=35.87 Aligned_cols=130 Identities=14% Similarity=0.222 Sum_probs=74.3
Q ss_pred cCCeEEEeecCcceeeeccCCCCCc-----------eEEEEeecCceEEEEeeCCeEEEEEecCCCceec--CCCceEEE
Q psy14552 53 PDGIRHIGAKNTTWKVSDKKESDKK-----------KIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKE--SDKKKIVR 119 (290)
Q Consensus 53 ~~~v~l~~~~~~~~~~~~~~~~~~~-----------~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~--~~~~~Ii~ 119 (290)
.++..+.........+||...|... .+.++...+.|++-|-++.+|---.+.. .+... ..+++=+|
T Consensus 286 ~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st-~efvRtl~gHkRGIA 364 (499)
T KOG0281|consen 286 SNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIA 364 (499)
T ss_pred eCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccc-eeeehhhhcccccce
Confidence 3444444444455566776655322 2445555588888887777665433321 12211 12222267
Q ss_pred EEeCCCEEEEE-EeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 120 CAVNQRQIVIA-LQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 120 as~~~~~l~Va-l~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
|..-+.+++|+ .+|++|+++++.. |.+-.+++-. +.=|-|+.|. ...++-|.+||.+.+|.+..
T Consensus 365 ClQYr~rlvVSGSSDntIRlwdi~~--G~cLRvLeGH--EeLvRciRFd--------~krIVSGaYDGkikvWdl~a 429 (499)
T KOG0281|consen 365 CLQYRDRLVVSGSSDNTIRLWDIEC--GACLRVLEGH--EELVRCIRFD--------NKRIVSGAYDGKIKVWDLQA 429 (499)
T ss_pred ehhccCeEEEecCCCceEEEEeccc--cHHHHHHhch--HHhhhheeec--------CceeeeccccceEEEEeccc
Confidence 75445555555 5699999998874 4322222211 1224566663 46788999999999999864
No 101
>KOG2114|consensus
Probab=74.71 E-value=1.3e+02 Score=32.32 Aligned_cols=111 Identities=16% Similarity=0.250 Sum_probs=61.1
Q ss_pred eEEEEeecCceEEEEeeCCeEEEEEec--CCCceecCCCceEEEE--EeCCCE--EEEEEeCC----eEEEEEEcCCCC-
Q psy14552 78 KIVRCAVNQRQIVIALQGGRLIYFEMH--PVSDKKESDKKKIVRC--AVNQRQ--IVIALQGG----RLIYFEMHPETG- 146 (290)
Q Consensus 78 ~Iv~as~n~~qv~ial~~g~i~~~~~~--~~~~~~~~~~~~Ii~a--s~~~~~--l~Val~~~----~i~~l~l~~~~~- 146 (290)
-|.+++.+..-|+++...|+|+.+.-. ....|..-+.. |+.- ..++.. +.||..+. .+.++.+++-.+
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~s-iv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n 105 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQS-IVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN 105 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEecccceeeehheecchh-hhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence 788899999999999999999876421 11234331111 2222 223322 44444332 466666653101
Q ss_pred Cceeee---e--eeec---CcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 147 ILDECS---E--TIQM---ESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 147 ~l~~~~---~--~~~l---~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
.-.++. . +... |.-.+++++.. .-..++||..||.|..|+=|.
T Consensus 106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~------~l~~Iv~Gf~nG~V~~~~GDi 156 (933)
T KOG2114|consen 106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSE------DLKTIVCGFTNGLVICYKGDI 156 (933)
T ss_pred CCcceeeeeeeeccCCCCCCCcceEEEEEc------cccEEEEEecCcEEEEEcCcc
Confidence 101211 1 1112 33445555542 267899999999999988553
No 102
>PTZ00420 coronin; Provisional
Probab=74.13 E-value=1.1e+02 Score=31.34 Aligned_cols=156 Identities=10% Similarity=0.046 Sum_probs=77.8
Q ss_pred ceEEEEeecC--ceEE-EEeeCCeEEEEEecCCCcee-cCCCceEEEE--EeCCCEEEEEEeCCeEEEEEEcCCCCCcee
Q psy14552 77 KKIVRCAVNQ--RQIV-IALQGGRLIYFEMHPVSDKK-ESDKKKIVRC--AVNQRQIVIALQGGRLIYFEMHPETGILDE 150 (290)
Q Consensus 77 ~~Iv~as~n~--~qv~-ial~~g~i~~~~~~~~~~~~-~~~~~~Ii~a--s~~~~~l~Val~~~~i~~l~l~~~~~~l~~ 150 (290)
..|..++.+. .+++ .+-.+|.|....+....... ...+..+.++ +.++..++.++.|+.|+++.+.. +..
T Consensus 126 ~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs--g~~-- 201 (568)
T PTZ00420 126 KKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK--QEI-- 201 (568)
T ss_pred CcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCC--CcE--
Confidence 3455555552 2343 34457788776654322111 1112224333 34566777777899999998765 321
Q ss_pred eeeeeec-CcceeE--EEeeeCCCCCccccEEEEEeCC----CeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCC
Q psy14552 151 CSETIQM-ESEVLC--MALSNAPSGEQMSRFLAVGLAD----NTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASD 223 (290)
Q Consensus 151 ~~~~~~l-~~ei~~--l~i~~~~~~~~~~~~l~VGl~d----g~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~ 223 (290)
.....- ...+.+ +.+...+ + ...+++.+..| +.|.+|.+...+ ..+....+...+.+|.....
T Consensus 202 -i~tl~gH~g~~~s~~v~~~~fs-~--d~~~IlTtG~d~~~~R~VkLWDlr~~~--~pl~~~~ld~~~~~L~p~~D---- 271 (568)
T PTZ00420 202 -ASSFHIHDGGKNTKNIWIDGLG-G--DDNYILSTGFSKNNMREMKLWDLKNTT--SALVTMSIDNASAPLIPHYD---- 271 (568)
T ss_pred -EEEEecccCCceeEEEEeeeEc-C--CCCEEEEEEcCCCCccEEEEEECCCCC--CceEEEEecCCccceEEeee----
Confidence 111211 111111 1111111 0 13466665544 479999986321 12222334444444433321
Q ss_pred CCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 224 PTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 224 ~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
.....++++|=+||.+..|.+..
T Consensus 272 -----------~~tg~l~lsGkGD~tIr~~e~~~ 294 (568)
T PTZ00420 272 -----------ESTGLIYLIGKGDGNCRYYQHSL 294 (568)
T ss_pred -----------CCCCCEEEEEECCCeEEEEEccC
Confidence 12344578899999999998854
No 103
>KOG1408|consensus
Probab=72.86 E-value=11 Score=39.29 Aligned_cols=68 Identities=19% Similarity=0.327 Sum_probs=46.6
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+.++..++-|-..+.|++.+|.. |......-.-+.||.|++.....- ....|+-|..|..|++|.+..
T Consensus 468 Sp~gqhLAsGDr~GnlrVy~Lq~----l~~~~~~eAHesEilcLeyS~p~~---~~kLLASasrdRlIHV~Dv~r 535 (1080)
T KOG1408|consen 468 SPDGQHLASGDRGGNLRVYDLQE----LEYTCFMEAHESEILCLEYSFPVL---TNKLLASASRDRLIHVYDVKR 535 (1080)
T ss_pred CCCcceecccCccCceEEEEehh----hhhhhheecccceeEEEeecCchh---hhHhhhhccCCceEEEEeccc
Confidence 55666677666678899998876 323322224578999999864322 346777788899999998753
No 104
>KOG1063|consensus
Probab=72.67 E-value=37 Score=35.19 Aligned_cols=80 Identities=14% Similarity=0.215 Sum_probs=53.4
Q ss_pred CCceE-EEEE--eCCCEEEEEEeCCeEEEEEEcCCC-CCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeE
Q psy14552 113 DKKKI-VRCA--VNQRQIVIALQGGRLIYFEMHPET-GILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTV 188 (290)
Q Consensus 113 ~~~~I-i~as--~~~~~l~Val~~~~i~~l~l~~~~-~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v 188 (290)
.+.+| =+|+ ....+++-|..|..+.+.+.+++. ..+.++ ....+...++.+++.+... +.+...++||+..|.|
T Consensus 616 ~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~-a~~~~~~aVTAv~~~~~~~-~e~~~~vavGle~GeI 693 (764)
T KOG1063|consen 616 AHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRF-ACLKFSLAVTAVAYLPVDH-NEKGDVVAVGLEKGEI 693 (764)
T ss_pred ccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhh-chhccCCceeeEEeecccc-ccccceEEEEecccEE
Confidence 34555 4553 456668888889999999887621 112221 1234667788888876642 2345689999999999
Q ss_pred EEEEeC
Q psy14552 189 RLISLA 194 (290)
Q Consensus 189 ~i~~l~ 194 (290)
.+|+.+
T Consensus 694 ~l~~~~ 699 (764)
T KOG1063|consen 694 VLWRRK 699 (764)
T ss_pred EEEecc
Confidence 999976
No 105
>KOG0272|consensus
Probab=72.45 E-value=18 Score=35.27 Aligned_cols=77 Identities=19% Similarity=0.185 Sum_probs=53.9
Q ss_pred ceEEEE--EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEE
Q psy14552 115 KKIVRC--AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLIS 192 (290)
Q Consensus 115 ~~Ii~a--s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~ 192 (290)
+-|..| +.++..++-|+|+|.+.+.+.++ ..+...+ ..--.++.++.+.|.. ...-++-|..||++.+|+
T Consensus 176 rPis~~~fS~ds~~laT~swsG~~kvW~~~~--~~~~~~l--~gH~~~v~~~~fhP~~----~~~~lat~s~Dgtvklw~ 247 (459)
T KOG0272|consen 176 RPISGCSFSRDSKHLATGSWSGLVKVWSVPQ--CNLLQTL--RGHTSRVGAAVFHPVD----SDLNLATASADGTVKLWK 247 (459)
T ss_pred CcceeeEeecCCCeEEEeecCCceeEeecCC--cceeEEE--eccccceeeEEEccCC----CccceeeeccCCceeeec
Confidence 336555 56677799999999999999876 2222211 1235678899998763 245677788899999999
Q ss_pred eCCCCce
Q psy14552 193 LAPQDCL 199 (290)
Q Consensus 193 l~~~~~l 199 (290)
++.+..|
T Consensus 248 ~~~e~~l 254 (459)
T KOG0272|consen 248 LSQETPL 254 (459)
T ss_pred cCCCcch
Confidence 9864433
No 106
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=72.25 E-value=86 Score=29.37 Aligned_cols=99 Identities=14% Similarity=0.177 Sum_probs=58.4
Q ss_pred ecCceEEEEeeCCeEEEEEecCC-CceecCCCceEEEE-EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcce
Q psy14552 84 VNQRQIVIALQGGRLIYFEMHPV-SDKKESDKKKIVRC-AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEV 161 (290)
Q Consensus 84 ~n~~qv~ial~~g~i~~~~~~~~-~~~~~~~~~~Ii~a-s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei 161 (290)
+.+.++.+...+|.+..|..... ..|...-+-.+... ...+..+.++..++.++.|.... +.+ . -+..++.++
T Consensus 63 v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~t--G~~--~-W~~~~~~~~ 137 (377)
T TIGR03300 63 VAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAED--GKE--L-WRAKLSSEV 137 (377)
T ss_pred EECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCC--CcE--e-eeeccCcee
Confidence 34677888888888887765433 24754322233222 45567788888888888776543 532 2 234455544
Q ss_pred eEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 162 LCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 162 ~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
.+..+. ....++++..+|.++.+..+
T Consensus 138 ~~~p~v-------~~~~v~v~~~~g~l~a~d~~ 163 (377)
T TIGR03300 138 LSPPLV-------ANGLVVVRTNDGRLTALDAA 163 (377)
T ss_pred ecCCEE-------ECCEEEEECCCCeEEEEEcC
Confidence 321111 13468888889988777653
No 107
>KOG0295|consensus
Probab=71.90 E-value=98 Score=29.86 Aligned_cols=63 Identities=16% Similarity=0.253 Sum_probs=43.4
Q ss_pred cccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEE
Q psy14552 175 MSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMV 254 (290)
Q Consensus 175 ~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~ 254 (290)
+-.+|..|.+|+++.+|.+.-..+|..+ .....=.+++++- .+.-||+=-..|+.|--+.
T Consensus 303 ~~~~l~s~SrDktIk~wdv~tg~cL~tL--~ghdnwVr~~af~------------------p~Gkyi~ScaDDktlrvwd 362 (406)
T KOG0295|consen 303 GGQVLGSGSRDKTIKIWDVSTGMCLFTL--VGHDNWVRGVAFS------------------PGGKYILSCADDKTLRVWD 362 (406)
T ss_pred CccEEEeecccceEEEEeccCCeEEEEE--ecccceeeeeEEc------------------CCCeEEEEEecCCcEEEEE
Confidence 3479999999999999998754454443 2233334555444 2455799899999988887
Q ss_pred EeC
Q psy14552 255 VDQ 257 (290)
Q Consensus 255 ~d~ 257 (290)
+..
T Consensus 363 l~~ 365 (406)
T KOG0295|consen 363 LKN 365 (406)
T ss_pred ecc
Confidence 644
No 108
>KOG0319|consensus
Probab=70.64 E-value=1.3e+02 Score=31.67 Aligned_cols=110 Identities=20% Similarity=0.271 Sum_probs=68.5
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCcee
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~ 200 (290)
+.++..++.+..+..+++++++. +.+....+ ..-..-+..|++.+. ...|+.|.-||.+.+|.+....+..
T Consensus 71 ~~d~~~L~~a~rs~llrv~~L~t--gk~irswK-a~He~Pvi~ma~~~~------g~LlAtggaD~~v~VWdi~~~~~th 141 (775)
T KOG0319|consen 71 TPDEEVLVTASRSQLLRVWSLPT--GKLIRSWK-AIHEAPVITMAFDPT------GTLLATGGADGRVKVWDIKNGYCTH 141 (775)
T ss_pred cCCccEEEEeeccceEEEEEccc--chHhHhHh-hccCCCeEEEEEcCC------CceEEeccccceEEEEEeeCCEEEE
Confidence 34555577776788889999986 44433221 111334555666532 4788888889999999997654433
Q ss_pred EeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 201 QKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 201 ~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
.. ...|.+..|++.- +. ....-|+.|=-||.+.-|.+..
T Consensus 142 ~f--kG~gGvVssl~F~---~~-------------~~~~lL~sg~~D~~v~vwnl~~ 180 (775)
T KOG0319|consen 142 SF--KGHGGVVSSLLFH---PH-------------WNRWLLASGATDGTVRVWNLND 180 (775)
T ss_pred Ee--cCCCceEEEEEeC---Cc-------------cchhheeecCCCceEEEEEccc
Confidence 33 2344444444333 22 2334589999999999998853
No 109
>KOG2445|consensus
Probab=69.96 E-value=1e+02 Score=29.22 Aligned_cols=124 Identities=12% Similarity=0.101 Sum_probs=78.9
Q ss_pred EEEE-E--eCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 117 IVRC-A--VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 117 Ii~a-s--~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
++.| + -.+.+++-+.+|+++.++..+.+++.......=+.-..+|--+.-.+.+. ...+++.+.|+++.+|.=
T Consensus 15 lihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEf----GqvvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 15 LIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEF----GQVVATCSYDRTVSIWEE 90 (361)
T ss_pred eeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccc----cceEEEEecCCceeeeee
Confidence 5555 2 33556666666888888876654454433221123456666666655543 478888889999999985
Q ss_pred CCCC----ceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEE-eC
Q psy14552 194 APQD----CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV-DQ 257 (290)
Q Consensus 194 ~~~~----~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~-d~ 257 (290)
.+.+ ..+=++...|..-..++.-++|... .-.+.|-..-.||.|--|+. |+
T Consensus 91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~-------------hlGLklA~~~aDG~lRIYEA~dp 146 (361)
T KOG2445|consen 91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPK-------------HLGLKLAAASADGILRIYEAPDP 146 (361)
T ss_pred cccccccccceeEEEEEeecCCcceeEEEecch-------------hcceEEEEeccCcEEEEEecCCc
Confidence 3221 2344555566666778888887543 45667888889999988885 44
No 110
>KOG0278|consensus
Probab=69.82 E-value=93 Score=28.74 Aligned_cols=103 Identities=16% Similarity=0.225 Sum_probs=65.8
Q ss_pred CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEee
Q psy14552 124 QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKN 203 (290)
Q Consensus 124 ~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~ 203 (290)
+..+.++ .++.|.+.+.+. + +.++.+.+|..|...++.|. ..++++|-.|+.++.|..+....+.-..
T Consensus 196 G~ilTia-~gssV~Fwdaks----f-~~lKs~k~P~nV~SASL~P~------k~~fVaGged~~~~kfDy~TgeEi~~~n 263 (334)
T KOG0278|consen 196 GRILTIA-YGSSVKFWDAKS----F-GLLKSYKMPCNVESASLHPK------KEFFVAGGEDFKVYKFDYNTGEEIGSYN 263 (334)
T ss_pred CCEEEEe-cCceeEEecccc----c-cceeeccCccccccccccCC------CceEEecCcceEEEEEeccCCceeeecc
Confidence 4445555 466677765432 4 33578899999999999754 3677788889999999886433222211
Q ss_pred EEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 204 LQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 204 ~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
..-|--+..++|.. .+.+ --.|-.||.+.-+...+
T Consensus 264 ----kgh~gpVhcVrFSP--------------dGE~-yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 264 ----KGHFGPVHCVRFSP--------------DGEL-YASGSEDGTIRLWQTTP 298 (334)
T ss_pred ----cCCCCceEEEEECC--------------CCce-eeccCCCceEEEEEecC
Confidence 12233344555522 2344 46799999999888755
No 111
>KOG0293|consensus
Probab=69.32 E-value=51 Score=32.35 Aligned_cols=113 Identities=14% Similarity=0.083 Sum_probs=65.8
Q ss_pred EEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeee-ecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC
Q psy14552 118 VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETI-QMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ 196 (290)
Q Consensus 118 i~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~-~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~ 196 (290)
+.-+.|+.++|-|..|.+..++.+.++ .++ ++.++. .....++-+...|. ..||+....|-.+.+|..+..
T Consensus 230 l~FS~nGkyLAsaSkD~Taiiw~v~~d-~~~-kl~~tlvgh~~~V~yi~wSPD------dryLlaCg~~e~~~lwDv~tg 301 (519)
T KOG0293|consen 230 LQFSHNGKYLASASKDSTAIIWIVVYD-VHF-KLKKTLVGHSQPVSYIMWSPD------DRYLLACGFDEVLSLWDVDTG 301 (519)
T ss_pred EEEcCCCeeEeeccCCceEEEEEEecC-cce-eeeeeeecccCceEEEEECCC------CCeEEecCchHheeeccCCcc
Confidence 555678888999988999999988774 443 222222 24567788888764 345544444555777877654
Q ss_pred CceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 197 DCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 197 ~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
..+...... ++.-+.|.+=.. ++. .+.+|..|+.++.+.+|.
T Consensus 302 d~~~~y~~~-~~~S~~sc~W~p-----------------Dg~-~~V~Gs~dr~i~~wdlDg 343 (519)
T KOG0293|consen 302 DLRHLYPSG-LGFSVSSCAWCP-----------------DGF-RFVTGSPDRTIIMWDLDG 343 (519)
T ss_pred hhhhhcccC-cCCCcceeEEcc-----------------CCc-eeEecCCCCcEEEecCCc
Confidence 444433222 333344443332 122 266677777766665543
No 112
>KOG1034|consensus
Probab=68.90 E-value=1e+02 Score=29.39 Aligned_cols=116 Identities=15% Similarity=0.193 Sum_probs=65.3
Q ss_pred CCCceEEEEeec------CceEEEEeeCCeEEEEEecCCC--ceec----CCCce-E-EEE-E--eC--CCEEEEEEeCC
Q psy14552 74 SDKKKIVRCAVN------QRQIVIALQGGRLIYFEMHPVS--DKKE----SDKKK-I-VRC-A--VN--QRQIVIALQGG 134 (290)
Q Consensus 74 ~~~~~Iv~as~n------~~qv~ial~~g~i~~~~~~~~~--~~~~----~~~~~-I-i~a-s--~~--~~~l~Val~~~ 134 (290)
+.+++|-.|..| ++|++....+.++..+|+.-.+ ...+ +++-+ . .++ + .+ +..+|+|-.-|
T Consensus 36 d~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~G 115 (385)
T KOG1034|consen 36 DHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLG 115 (385)
T ss_pred cCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeeccee
Confidence 334555555555 7888777777788888886443 1111 22222 3 333 2 23 23366665667
Q ss_pred eEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCc
Q psy14552 135 RLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC 198 (290)
Q Consensus 135 ~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~ 198 (290)
.|+++.+.. +++... -+.-..+|.-+.+.|. +..+++.|..|.+|++|.+...-+
T Consensus 116 vIrVid~~~--~~~~~~--~~ghG~sINeik~~p~-----~~qlvls~SkD~svRlwnI~~~~C 170 (385)
T KOG1034|consen 116 VIRVIDVVS--GQCSKN--YRGHGGSINEIKFHPD-----RPQLVLSASKDHSVRLWNIQTDVC 170 (385)
T ss_pred EEEEEecch--hhhccc--eeccCccchhhhcCCC-----CCcEEEEecCCceEEEEeccCCeE
Confidence 888876654 222221 1234556655555543 356777788888888888764433
No 113
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=66.35 E-value=1.3e+02 Score=29.18 Aligned_cols=114 Identities=21% Similarity=0.266 Sum_probs=69.0
Q ss_pred EEEEEe-C---CeEEEEEEcCCCCCceeeeee-eecC---cceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC--C
Q psy14552 127 IVIALQ-G---GRLIYFEMHPETGILDECSET-IQME---SEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP--Q 196 (290)
Q Consensus 127 l~Val~-~---~~i~~l~l~~~~~~l~~~~~~-~~l~---~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~--~ 196 (290)
++++.. + ++|++|.++++++.|..+... ..++ .++-=+++-.... .+..|++|...+|.+.-|.|.. +
T Consensus 116 lavas~R~~g~n~l~~f~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~--~g~~ya~v~~k~G~~~Qy~L~~~~~ 193 (381)
T PF02333_consen 116 LAVASDRSDGRNSLRLFRIDPDTGELTDVTDPAAPIATDLSEPYGLCLYRSPS--TGALYAFVNGKDGRVEQYELTDDGD 193 (381)
T ss_dssp EEEEEE-CCCT-EEEEEEEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TT--T--EEEEEEETTSEEEEEEEEE-TT
T ss_pred EEEEecCcCCCCeEEEEEecCCCCcceEcCCCCcccccccccceeeEEeecCC--CCcEEEEEecCCceEEEEEEEeCCC
Confidence 666653 2 579999999754555443210 0111 2333334432211 1467999999999999998853 2
Q ss_pred Cce--eEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCC
Q psy14552 197 DCL--KQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG 260 (290)
Q Consensus 197 ~~l--~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~ 260 (290)
+.+ +.+++..++.+|+.+.+- +..-+||+|=.|--+-+|..++..+
T Consensus 194 g~v~~~lVR~f~~~sQ~EGCVVD------------------De~g~LYvgEE~~GIW~y~Aep~~~ 241 (381)
T PF02333_consen 194 GKVSATLVREFKVGSQPEGCVVD------------------DETGRLYVGEEDVGIWRYDAEPEGG 241 (381)
T ss_dssp SSEEEEEEEEEE-SS-EEEEEEE------------------TTTTEEEEEETTTEEEEEESSCCC-
T ss_pred CcEeeEEEEEecCCCcceEEEEe------------------cccCCEEEecCccEEEEEecCCCCC
Confidence 223 456667788888888766 3445699999999999998887654
No 114
>KOG2394|consensus
Probab=65.82 E-value=1.6e+02 Score=29.96 Aligned_cols=63 Identities=19% Similarity=0.305 Sum_probs=45.2
Q ss_pred CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 123 ~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
++..+|+-..|+.+++|..+.+ .|-.+. .+.=.-.+|++..+. .+|+++|-.|-.|-+|++.+
T Consensus 301 DG~~LA~VSqDGfLRvF~fdt~--eLlg~m--kSYFGGLLCvcWSPD------GKyIvtGGEDDLVtVwSf~e 363 (636)
T KOG2394|consen 301 DGKYLATVSQDGFLRIFDFDTQ--ELLGVM--KSYFGGLLCVCWSPD------GKYIVTGGEDDLVTVWSFEE 363 (636)
T ss_pred CCceEEEEecCceEEEeeccHH--HHHHHH--HhhccceEEEEEcCC------ccEEEecCCcceEEEEEecc
Confidence 4555777668999999988752 222221 233356788888754 58999999999999999864
No 115
>KOG3914|consensus
Probab=65.54 E-value=62 Score=31.33 Aligned_cols=115 Identities=15% Similarity=0.275 Sum_probs=70.5
Q ss_pred CCCceEEEEeecCceEEEEeeCCeEEEEEecCCCceec---CCCceE---EEEEeCCCEEEEEEeCCeEEEEEEcCCCCC
Q psy14552 74 SDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKE---SDKKKI---VRCAVNQRQIVIALQGGRLIYFEMHPETGI 147 (290)
Q Consensus 74 ~~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~---~~~~~I---i~as~~~~~l~Val~~~~i~~l~l~~~~~~ 147 (290)
|...+-.++...+..++++-.-|+.+-+-+-...+|.. -.+..| ++-+.+...++-|-.|..|++...+. ...
T Consensus 107 ~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa-~f~ 185 (390)
T KOG3914|consen 107 PKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPA-TFV 185 (390)
T ss_pred ccCcceeeeeeccceEEEEeecCCceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCc-ccc
Confidence 44455566667789999999999888776644333433 244445 33355666677777789999988875 121
Q ss_pred cee-eeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCce
Q psy14552 148 LDE-CSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCL 199 (290)
Q Consensus 148 l~~-~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l 199 (290)
++. ++.+..+ |+-+++.+ ...|.-|.+|++|+.|.+.....|
T Consensus 186 IesfclGH~eF---VS~isl~~-------~~~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 186 IESFCLGHKEF---VSTISLTD-------NYLLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred hhhhccccHhh---eeeeeecc-------CceeeecCCCCcEEEEecccCCcc
Confidence 211 1122222 44444431 233788888999999998654444
No 116
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=65.40 E-value=1.1e+02 Score=29.13 Aligned_cols=100 Identities=17% Similarity=0.179 Sum_probs=57.0
Q ss_pred eecCceEEEEeeCCeEEEEEecCCC-ceecCC--CceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCc
Q psy14552 83 AVNQRQIVIALQGGRLIYFEMHPVS-DKKESD--KKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMES 159 (290)
Q Consensus 83 s~n~~qv~ial~~g~i~~~~~~~~~-~~~~~~--~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ 159 (290)
...+..+.+...+|+++.++..... .|..+. +....+-...+..+.++..++.|+.+..+. +++ +.+..++.
T Consensus 291 ~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld~~t--G~~---~~~~~~~~ 365 (394)
T PRK11138 291 AVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSEGYLHWINRED--GRF---VAQQKVDS 365 (394)
T ss_pred EEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCCCEEEEEECCC--CCE---EEEEEcCC
Confidence 3456777778888888888775432 475432 111111134456788887788888876543 542 22333332
Q ss_pred ceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 160 EVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 160 ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
+.. .+ .+.- ....|+|++.||.|+.+++
T Consensus 366 ~~~-~s-~P~~----~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 366 SGF-LS-EPVV----ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred Ccc-ee-CCEE----ECCEEEEEeCCceEEEEeC
Confidence 210 00 0000 1347999999999887765
No 117
>KOG0315|consensus
Probab=64.76 E-value=1.2e+02 Score=28.05 Aligned_cols=67 Identities=19% Similarity=0.345 Sum_probs=47.4
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCc
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC 198 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~ 198 (290)
.+.+..+.-|..|+++++.++.. + ++....+.+.-|.++-+.+ ...-|++|..+|.|++|.|..+.+
T Consensus 92 ~~dgrWMyTgseDgt~kIWdlR~----~-~~qR~~~~~spVn~vvlhp------nQteLis~dqsg~irvWDl~~~~c 158 (311)
T KOG0315|consen 92 QCDGRWMYTGSEDGTVKIWDLRS----L-SCQRNYQHNSPVNTVVLHP------NQTELISGDQSGNIRVWDLGENSC 158 (311)
T ss_pred eecCeEEEecCCCceEEEEeccC----c-ccchhccCCCCcceEEecC------CcceEEeecCCCcEEEEEccCCcc
Confidence 45555677776799999998875 1 2223345566777776653 367899999999999999976543
No 118
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=62.57 E-value=1.1e+02 Score=27.06 Aligned_cols=105 Identities=15% Similarity=0.300 Sum_probs=64.2
Q ss_pred EEEEeec-CceEEEEeeCCeEEEEEecCCCcee------------------cCCCceEEE--E-EeCCCEEEEEEeCCeE
Q psy14552 79 IVRCAVN-QRQIVIALQGGRLIYFEMHPVSDKK------------------ESDKKKIVR--C-AVNQRQIVIALQGGRL 136 (290)
Q Consensus 79 Iv~as~n-~~qv~ial~~g~i~~~~~~~~~~~~------------------~~~~~~Ii~--a-s~~~~~l~Val~~~~i 136 (290)
|....+. +-.++++++||.+.++.++....-. ...+....+ . ..+...++++. ...|
T Consensus 38 I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i 116 (275)
T PF00780_consen 38 ITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKI 116 (275)
T ss_pred EEEEEEecccCEEEEEcCCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEE-CCEE
Confidence 6666665 5678899999999999875421111 011111122 0 12233477764 4589
Q ss_pred EEEEEcCCCCCc-eeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 137 IYFEMHPETGIL-DECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 137 ~~l~l~~~~~~l-~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
++++........ .. .+...+|..+..+.+. ...+++|..++ +.+++++
T Consensus 117 ~i~~~~~~~~~f~~~-~ke~~lp~~~~~i~~~--------~~~i~v~~~~~-f~~idl~ 165 (275)
T PF00780_consen 117 LIYEWNDPRNSFSKL-LKEISLPDPPSSIAFL--------GNKICVGTSKG-FYLIDLN 165 (275)
T ss_pred EEEEEECCcccccce-eEEEEcCCCcEEEEEe--------CCEEEEEeCCc-eEEEecC
Confidence 999887632233 23 3567899999999885 46899998666 4556665
No 119
>KOG1587|consensus
Probab=62.46 E-value=43 Score=34.10 Aligned_cols=52 Identities=23% Similarity=0.323 Sum_probs=37.1
Q ss_pred eEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 135 RLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 135 ~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
.+.+.++.+. .. .+ ....-+.++.|+.+.+.+ ...|+.|+.+|.|..|.+-.
T Consensus 223 ~~~vW~~~~p-~~-Pe--~~~~~~s~v~~~~f~p~~-----p~ll~gG~y~GqV~lWD~~~ 274 (555)
T KOG1587|consen 223 VLLVWSLKNP-NT-PE--LVLESPSEVTCLKFCPFD-----PNLLAGGCYNGQVVLWDLRK 274 (555)
T ss_pred eEEEEecCCC-CC-ce--EEEecCCceeEEEeccCC-----cceEEeeccCceEEEEEccC
Confidence 4455566642 11 12 135678999999999874 57888999999999999854
No 120
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=60.47 E-value=1.1e+02 Score=26.47 Aligned_cols=82 Identities=17% Similarity=0.221 Sum_probs=49.2
Q ss_pred EeCCCEEEEEE-eCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeC-CCeEEEEEeCCCCc
Q psy14552 121 AVNQRQIVIAL-QGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLA-DNTVRLISLAPQDC 198 (290)
Q Consensus 121 s~~~~~l~Val-~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v~i~~l~~~~~ 198 (290)
+.++..++++. .++.+.++.+.. +.+. ......+-+.++++.+. ..+|+++.. +|.|.+|.+..
T Consensus 215 s~dg~~~~~~~~~~~~i~v~d~~~--~~~~---~~~~~~~~~~~~~~~~~------g~~l~~~~~~~~~i~v~d~~~--- 280 (300)
T TIGR03866 215 TKDGKTAFVALGPANRVAVVDAKT--YEVL---DYLLVGQRVWQLAFTPD------EKYLLTTNGVSNDVSVIDVAA--- 280 (300)
T ss_pred CCCCCEEEEEcCCCCeEEEEECCC--CcEE---EEEEeCCCcceEEECCC------CCEEEEEcCCCCeEEEEECCC---
Confidence 34555656654 356788777653 3321 22233455667777543 357777754 89999999874
Q ss_pred eeEeeEEecCCcceEEEE
Q psy14552 199 LKQKNLQGLPDLAESLVM 216 (290)
Q Consensus 199 l~~~~~~~L~~~p~Sl~~ 216 (290)
.+.+....++.-|.+|++
T Consensus 281 ~~~~~~~~~~~~~~~~~~ 298 (300)
T TIGR03866 281 LKVIKSIKVGRLPWGVVV 298 (300)
T ss_pred CcEEEEEEcccccceeEe
Confidence 343433456777777754
No 121
>KOG0263|consensus
Probab=59.87 E-value=2.3e+02 Score=29.75 Aligned_cols=68 Identities=18% Similarity=0.238 Sum_probs=45.5
Q ss_pred eCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCce
Q psy14552 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCL 199 (290)
Q Consensus 122 ~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l 199 (290)
.|..+++-|.+|.++++..+.. |.-..+.. ---..|+++++.+. -.||+-|..||.|.+|.+.....+
T Consensus 545 PNs~Y~aTGSsD~tVRlWDv~~--G~~VRiF~--GH~~~V~al~~Sp~------Gr~LaSg~ed~~I~iWDl~~~~~v 612 (707)
T KOG0263|consen 545 PNSNYVATGSSDRTVRLWDVST--GNSVRIFT--GHKGPVTALAFSPC------GRYLASGDEDGLIKIWDLANGSLV 612 (707)
T ss_pred CcccccccCCCCceEEEEEcCC--CcEEEEec--CCCCceEEEEEcCC------CceEeecccCCcEEEEEcCCCcch
Confidence 4566677777788888876654 32111110 02356888888763 479999999999999999754333
No 122
>KOG1517|consensus
Probab=59.86 E-value=2.4e+02 Score=31.28 Aligned_cols=133 Identities=16% Similarity=0.219 Sum_probs=82.0
Q ss_pred eEEEeecCcceeeeccCCCCCceEEEEeec---CceEEEEeeCCeEEEEEecC------CCceecC-CCceEEEEEeC--
Q psy14552 56 IRHIGAKNTTWKVSDKKESDKKKIVRCAVN---QRQIVIALQGGRLIYFEMHP------VSDKKES-DKKKIVRCAVN-- 123 (290)
Q Consensus 56 v~l~~~~~~~~~~~~~~~~~~~~Iv~as~n---~~qv~ial~~g~i~~~~~~~------~~~~~~~-~~~~Ii~as~~-- 123 (290)
||+-|..+ ...+.|++...+.-|++-|++ .++++.-+++|.+=||.... ...|++- +...|+.++.+
T Consensus 1189 IRIWDa~~-E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~ 1267 (1387)
T KOG1517|consen 1189 IRIWDAHK-EQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQ 1267 (1387)
T ss_pred EEEEeccc-ceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecC
Confidence 44444442 234567777777777777776 58899999999999986532 1234441 11116666533
Q ss_pred CC-EEEEEEeCCeEEEEEEcCC-CCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC
Q psy14552 124 QR-QIVIALQGGRLIYFEMHPE-TGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ 196 (290)
Q Consensus 124 ~~-~l~Val~~~~i~~l~l~~~-~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~ 196 (290)
+- .++=|+.+|.|.++.+.-+ ....-.+..+.+..+..+++.+.+ ..+.++.|.. +.+.+|++..+
T Consensus 1268 G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~------hapiiAsGs~-q~ikIy~~~G~ 1335 (1387)
T KOG1517|consen 1268 GLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHE------HAPIIASGSA-QLIKIYSLSGE 1335 (1387)
T ss_pred CCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeecc------CCCeeeecCc-ceEEEEecChh
Confidence 22 3666667999999877641 011111112233445588887753 3688888888 99999998754
No 123
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=58.70 E-value=40 Score=20.65 Aligned_cols=38 Identities=21% Similarity=0.073 Sum_probs=27.3
Q ss_pred ccEEEEEeC-CCeEEEEEeCCCCceeEeeEEecCCcceEEEE
Q psy14552 176 SRFLAVGLA-DNTVRLISLAPQDCLKQKNLQGLPDLAESLVM 216 (290)
Q Consensus 176 ~~~l~VGl~-dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~ 216 (290)
..+|+|+.+ +++|.++... ..+.+....++.-|+.+++
T Consensus 3 ~~~lyv~~~~~~~v~~id~~---~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVIDTA---TNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CCEEEEEeCCCCEEEEEECC---CCeEEEEEECCCCCceEEe
Confidence 357888887 8888887654 3566666677888887764
No 124
>KOG0289|consensus
Probab=58.59 E-value=2e+02 Score=28.57 Aligned_cols=106 Identities=12% Similarity=0.158 Sum_probs=61.3
Q ss_pred EEEEeecCceEEEEeeCCeEEEEEecCCCceec----CCCceEEEEEe--CCCEEEEEEeCCeEEEEEEcCCCCCceeee
Q psy14552 79 IVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKE----SDKKKIVRCAV--NQRQIVIALQGGRLIYFEMHPETGILDECS 152 (290)
Q Consensus 79 Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~----~~~~~Ii~as~--~~~~l~Val~~~~i~~l~l~~~~~~l~~~~ 152 (290)
-.++-.+..|++=|-.+|...|--+.....+.. ..++++.++.- ++.-+..|+.|+.+.++.+... . ..
T Consensus 308 ~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~-~---~~- 382 (506)
T KOG0289|consen 308 GLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQ-T---NV- 382 (506)
T ss_pred eeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCc-c---cc-
Confidence 334444566666666666555444433222221 12334444433 3333555556999999988763 1 11
Q ss_pred eeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 153 ETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 153 ~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
.+.. -...|..++|.. ..-||+++..|+.|..|.|-.
T Consensus 383 a~Fpght~~vk~i~FsE------NGY~Lat~add~~V~lwDLRK 420 (506)
T KOG0289|consen 383 AKFPGHTGPVKAISFSE------NGYWLATAADDGSVKLWDLRK 420 (506)
T ss_pred ccCCCCCCceeEEEecc------CceEEEEEecCCeEEEEEehh
Confidence 1222 235677777752 258999999999999999864
No 125
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=58.55 E-value=1.7e+02 Score=27.94 Aligned_cols=108 Identities=16% Similarity=0.198 Sum_probs=68.4
Q ss_pred EEEEEe----CCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeC-CCeEEEEEeCCC-Ccee
Q psy14552 127 IVIALQ----GGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLA-DNTVRLISLAPQ-DCLK 200 (290)
Q Consensus 127 l~Val~----~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v~i~~l~~~-~~l~ 200 (290)
+.||.. +..|+.|.++.+++.+... +...-+.+++-|.+.+. ++..|....-. +|-+.-|++|++ +.|+
T Consensus 5 ~YiGtyT~~~s~gI~v~~ld~~~g~l~~~-~~v~~~~nptyl~~~~~----~~~LY~v~~~~~~ggvaay~iD~~~G~Lt 79 (346)
T COG2706 5 VYIGTYTKRESQGIYVFNLDTKTGELSLL-QLVAELGNPTYLAVNPD----QRHLYVVNEPGEEGGVAAYRIDPDDGRLT 79 (346)
T ss_pred EEEeeecccCCCceEEEEEeCcccccchh-hhccccCCCceEEECCC----CCEEEEEEecCCcCcEEEEEEcCCCCeEE
Confidence 556653 4579999999545665443 34556778888888643 12344444442 678999999976 6788
Q ss_pred EeeEEecCCcc-eEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecC-ceEEEEEEeC
Q psy14552 201 QKNLQGLPDLA-ESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQN-GALLRMVVDQ 257 (290)
Q Consensus 201 ~~~~~~L~~~p-~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~d-G~l~~~~~d~ 257 (290)
.+.++.++.-| ..+++.+ ...|||++--. |.+-.+.+..
T Consensus 80 ~ln~~~~~g~~p~yvsvd~------------------~g~~vf~AnY~~g~v~v~p~~~ 120 (346)
T COG2706 80 FLNRQTLPGSPPCYVSVDE------------------DGRFVFVANYHSGSVSVYPLQA 120 (346)
T ss_pred EeeccccCCCCCeEEEECC------------------CCCEEEEEEccCceEEEEEccc
Confidence 88888776544 5555543 34457777544 5555566643
No 126
>KOG0288|consensus
Probab=57.23 E-value=2e+02 Score=28.26 Aligned_cols=61 Identities=18% Similarity=0.248 Sum_probs=36.8
Q ss_pred CCEEEEEEeCCeEEEEEEcCCCCCceeeeeee-----ecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 124 QRQIVIALQGGRLIYFEMHPETGILDECSETI-----QMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 124 ~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~-----~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+.+++.+..|+++-++.+.. . ++.... ...++.+-.-|.| ...|++.|.-||.|++|++..
T Consensus 353 g~~lLsssRDdtl~viDlRt--~---eI~~~~sA~g~k~asDwtrvvfSp------d~~YvaAGS~dgsv~iW~v~t 418 (459)
T KOG0288|consen 353 GLELLSSSRDDTLKVIDLRT--K---EIRQTFSAEGFKCASDWTRVVFSP------DGSYVAAGSADGSVYIWSVFT 418 (459)
T ss_pred CeEEeeecCCCceeeeeccc--c---cEEEEeeccccccccccceeEECC------CCceeeeccCCCcEEEEEccC
Confidence 44455544566666554432 1 211111 1345566666654 368999999999999999864
No 127
>KOG0274|consensus
Probab=56.70 E-value=2.3e+02 Score=28.78 Aligned_cols=77 Identities=21% Similarity=0.345 Sum_probs=47.8
Q ss_pred CCceEEEE-EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEE
Q psy14552 113 DKKKIVRC-AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLI 191 (290)
Q Consensus 113 ~~~~Ii~a-s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~ 191 (290)
.+..++.| +.....++-|..|.+|++..++. +.....+. .--..|-|+.+. ..+++.|+.||+|.+|
T Consensus 289 gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n--~~~l~l~~--~h~~~V~~v~~~--------~~~lvsgs~d~~v~VW 356 (537)
T KOG0274|consen 289 GHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTN--GACLNLLR--GHTGPVNCVQLD--------EPLLVSGSYDGTVKVW 356 (537)
T ss_pred CCCceEEEEEccCceEeeccCCceEEEEeccC--cceEEEec--cccccEEEEEec--------CCEEEEEecCceEEEE
Confidence 34445666 33333344446799999998874 33222221 134567777663 5799999999999999
Q ss_pred EeCCCCceeE
Q psy14552 192 SLAPQDCLKQ 201 (290)
Q Consensus 192 ~l~~~~~l~~ 201 (290)
......++..
T Consensus 357 ~~~~~~cl~s 366 (537)
T KOG0274|consen 357 DPRTGKCLKS 366 (537)
T ss_pred Ehhhceeeee
Confidence 8764344433
No 128
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=56.47 E-value=1.9e+02 Score=27.69 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=46.8
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeC-CCeEEEEEeCCCCce
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLA-DNTVRLISLAPQDCL 199 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v~i~~l~~~~~l 199 (290)
+.++.++.|+..|+.|.++.+.. . ++.+++....++-.+++.+. ..|++|+.+ ++.+.++... .|
T Consensus 45 s~Dgr~~yv~~rdg~vsviD~~~--~---~~v~~i~~G~~~~~i~~s~D------G~~~~v~n~~~~~v~v~D~~---tl 110 (369)
T PF02239_consen 45 SPDGRYLYVANRDGTVSVIDLAT--G---KVVATIKVGGNPRGIAVSPD------GKYVYVANYEPGTVSVIDAE---TL 110 (369)
T ss_dssp TT-SSEEEEEETTSEEEEEETTS--S---SEEEEEE-SSEEEEEEE--T------TTEEEEEEEETTEEEEEETT---T-
T ss_pred cCCCCEEEEEcCCCeEEEEECCc--c---cEEEEEecCCCcceEEEcCC------CCEEEEEecCCCceeEeccc---cc
Confidence 45567788887789888877654 2 23456677777777777642 478999986 8999987754 46
Q ss_pred eEeeEEecC
Q psy14552 200 KQKNLQGLP 208 (290)
Q Consensus 200 ~~~~~~~L~ 208 (290)
+.++....+
T Consensus 111 e~v~~I~~~ 119 (369)
T PF02239_consen 111 EPVKTIPTG 119 (369)
T ss_dssp -EEEEEE--
T ss_pred cceeecccc
Confidence 666655443
No 129
>KOG3621|consensus
Probab=56.22 E-value=1e+02 Score=32.19 Aligned_cols=111 Identities=17% Similarity=0.274 Sum_probs=66.2
Q ss_pred EEE-EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeee--cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 118 VRC-AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ--MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 118 i~a-s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~--l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
.+| +.+...+++|.+.+.++++.=.. + ++.+... -...++..++.+ ...++++|+.+|.|.+|.++
T Consensus 38 lTc~dst~~~l~~GsS~G~lyl~~R~~--~---~~~~~~~~~~~~~~~~~~vs~------~e~lvAagt~~g~V~v~ql~ 106 (726)
T KOG3621|consen 38 LTCVDATEEYLAMGSSAGSVYLYNRHT--G---EMRKLKNEGATGITCVRSVSS------VEYLVAAGTASGRVSVFQLN 106 (726)
T ss_pred EEEeecCCceEEEecccceEEEEecCc--h---hhhcccccCccceEEEEEecc------hhHhhhhhcCCceEEeehhh
Confidence 445 88889999999989998875322 1 1111111 122333334432 25678888889999999886
Q ss_pred CCC--ceeEeeEEecCCc--ceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 195 PQD--CLKQKNLQGLPDL--AESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 195 ~~~--~l~~~~~~~L~~~--p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
... .+..+.. .+. +..+..+.- ..+...+|.|-.-|.+.-.++|.
T Consensus 107 ~~~p~~~~~~t~---~d~~~~~rVTal~W---------------s~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 107 KELPRDLDYVTP---CDKSHKCRVTALEW---------------SKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ccCCCcceeecc---ccccCCceEEEEEe---------------cccccEEeecCCCceEEEEEech
Confidence 421 1111111 123 455555543 13445699999999998888876
No 130
>KOG1523|consensus
Probab=55.87 E-value=48 Score=31.44 Aligned_cols=101 Identities=17% Similarity=0.254 Sum_probs=57.6
Q ss_pred CCCceEEEEeecCceEEEEeeCCeEEEEEecCCCceecC-CCceE---EEE---EeCCCEEEEEEeCCe--EEEEEEcCC
Q psy14552 74 SDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKES-DKKKI---VRC---AVNQRQIVIALQGGR--LIYFEMHPE 144 (290)
Q Consensus 74 ~~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~-~~~~I---i~a---s~~~~~l~Val~~~~--i~~l~l~~~ 144 (290)
|..-+||.|+--++--|=.. .+.+.|.+. .-.+| ..| +.+.+.++||..... |.||+-+.+
T Consensus 65 p~snrIvtcs~drnayVw~~----------~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENd 134 (361)
T KOG1523|consen 65 PKSNRIVTCSHDRNAYVWTQ----------PSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQEND 134 (361)
T ss_pred CCCCceeEccCCCCcccccc----------CCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccc
Confidence 45556777776655433322 234567662 21222 222 456777999854443 346664431
Q ss_pred CCCcee-eeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 145 TGILDE-CSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 145 ~~~l~~-~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
=... .+ ++++.+.|+|++-.+ ..-.|++|.-|+..++|+.
T Consensus 135 --WWVsKhi-kkPirStv~sldWhp------nnVLlaaGs~D~k~rVfSa 175 (361)
T KOG1523|consen 135 --WWVSKHI-KKPIRSTVTSLDWHP------NNVLLAAGSTDGKCRVFSA 175 (361)
T ss_pred --eehhhhh-CCccccceeeeeccC------CcceecccccCcceeEEEE
Confidence 1111 11 235668888888764 2578888989998888863
No 131
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=54.79 E-value=26 Score=20.72 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=20.3
Q ss_pred cceeEEEeeeCCCCCccccEEEEEeCCCeEEEEE
Q psy14552 159 SEVLCMALSNAPSGEQMSRFLAVGLADNTVRLIS 192 (290)
Q Consensus 159 ~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~ 192 (290)
.+|.+++.. ..+++|++..+.+++|+
T Consensus 2 E~i~aia~g--------~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAG--------DSWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEcc--------CCEEEEEeCCCeEEecC
Confidence 457777763 67999999999888874
No 132
>KOG0639|consensus
Probab=54.03 E-value=2.5e+02 Score=28.52 Aligned_cols=199 Identities=19% Similarity=0.183 Sum_probs=0.0
Q ss_pred eEEEEecCCeEEEeecCcceeeeccC-CCCCceEEEEeec--CceE--EEEeeCCeEEEE--EecCCCceec-CCCceE-
Q psy14552 47 SIVQVYPDGIRHIGAKNTTWKVSDKK-ESDKKKIVRCAVN--QRQI--VIALQGGRLIYF--EMHPVSDKKE-SDKKKI- 117 (290)
Q Consensus 47 ~ivQVt~~~v~l~~~~~~~~~~~~~~-~~~~~~Iv~as~n--~~qv--~ial~~g~i~~~--~~~~~~~~~~-~~~~~I- 117 (290)
+.+-|..-.-+++...+.--+|||+. |.+..+|..-.|- ++|+ ...+.+|+-+.. |.....-|.. ....+|
T Consensus 423 cAvtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprik 502 (705)
T KOG0639|consen 423 CAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIK 502 (705)
T ss_pred EEEEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchh
Q ss_pred -------EEE---EeCCCE-EEEEE-eCCeEEEEEEcCCCCCceeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeC
Q psy14552 118 -------VRC---AVNQRQ-IVIAL-QGGRLIYFEMHPETGILDECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLA 184 (290)
Q Consensus 118 -------i~a---s~~~~~-l~Val-~~~~i~~l~l~~~~~~l~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~ 184 (290)
-+| +.+... ++.+| +|+.|++..|.++ .+...+. -+.-.+|+.+... ...|.-|.-
T Consensus 503 aeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq-----~~VrqfqGhtDGascIdis~d------GtklWTGGl 571 (705)
T KOG0639|consen 503 AELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQ-----TLVRQFQGHTDGASCIDISKD------GTKLWTGGL 571 (705)
T ss_pred hhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccc-----eeeecccCCCCCceeEEecCC------CceeecCCC
Q ss_pred CCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEE-eCCCCccc
Q psy14552 185 DNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV-DQTSGDLS 263 (290)
Q Consensus 185 dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~-d~~~~~l~ 263 (290)
|++|+-|.+- .-....+-....+.-||--+ -..-.|.+||.|+.+--... .+....|.
T Consensus 572 DntvRcWDlr---egrqlqqhdF~SQIfSLg~c------------------P~~dWlavGMens~vevlh~skp~kyqlh 630 (705)
T KOG0639|consen 572 DNTVRCWDLR---EGRQLQQHDFSSQIFSLGYC------------------PTGDWLAVGMENSNVEVLHTSKPEKYQLH 630 (705)
T ss_pred ccceeehhhh---hhhhhhhhhhhhhheecccC------------------CCccceeeecccCcEEEEecCCccceeec
Q ss_pred ccceEEecCcceEEEEE
Q psy14552 264 DNRMRYLGSRPVKLFKI 280 (290)
Q Consensus 264 ~~~~~~lG~~pv~l~~~ 280 (290)
....-.|- +||..|
T Consensus 631 lheScVLS---lKFa~c 644 (705)
T KOG0639|consen 631 LHESCVLS---LKFAYC 644 (705)
T ss_pred ccccEEEE---EEeccc
No 133
>KOG0645|consensus
Probab=53.93 E-value=1.9e+02 Score=26.97 Aligned_cols=69 Identities=22% Similarity=0.338 Sum_probs=51.3
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCc
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC 198 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~ 198 (290)
+..++.++.|.-|.++.+++-.+ +.++.+ ..++ -++|+-|+++.+. ..||+-...|-+|-+|.+++++.
T Consensus 70 sp~g~~La~aSFD~t~~Iw~k~~--~efecv-~~lEGHEnEVK~Vaws~s------G~~LATCSRDKSVWiWe~deddE 139 (312)
T KOG0645|consen 70 SPHGRYLASASFDATVVIWKKED--GEFECV-ATLEGHENEVKCVAWSAS------GNYLATCSRDKSVWIWEIDEDDE 139 (312)
T ss_pred cCCCcEEEEeeccceEEEeecCC--CceeEE-eeeeccccceeEEEEcCC------CCEEEEeeCCCeEEEEEecCCCc
Confidence 44566688887799998886543 456443 3444 5789999999753 47999999999999999986543
No 134
>KOG0293|consensus
Probab=53.74 E-value=1.1e+02 Score=30.20 Aligned_cols=91 Identities=11% Similarity=0.249 Sum_probs=55.6
Q ss_pred eCCeEEEEEecC--CCceecCCCceE--EEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeC
Q psy14552 94 QGGRLIYFEMHP--VSDKKESDKKKI--VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNA 169 (290)
Q Consensus 94 ~~g~i~~~~~~~--~~~~~~~~~~~I--i~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~ 169 (290)
.++++++..++. ...|.......+ ++-+.++..++..+.|..|+++..... .+. ...+...-|+..++..
T Consensus 332 ~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~----~dr-~lise~~~its~~iS~- 405 (519)
T KOG0293|consen 332 PDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREAR----VDR-GLISEEQPITSFSISK- 405 (519)
T ss_pred CCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhh----hhh-ccccccCceeEEEEcC-
Confidence 344555444432 246876544344 222456777666667888888765541 122 1234455666666642
Q ss_pred CCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 170 PSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 170 ~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
...|++|-+.+..++.|.+.+
T Consensus 406 -----d~k~~LvnL~~qei~LWDl~e 426 (519)
T KOG0293|consen 406 -----DGKLALVNLQDQEIHLWDLEE 426 (519)
T ss_pred -----CCcEEEEEcccCeeEEeecch
Confidence 368999999999999999874
No 135
>KOG0270|consensus
Probab=51.83 E-value=2.5e+02 Score=27.77 Aligned_cols=118 Identities=13% Similarity=0.052 Sum_probs=69.1
Q ss_pred EEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC-CceeEeeEE
Q psy14552 127 IVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ-DCLKQKNLQ 205 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~-~~l~~~~~~ 205 (290)
++-|+.|+++.+..+.+. + +.........+|--+...+. ...+.+||+.||.|+.|.+-.. ..+-.++
T Consensus 302 LLsGs~D~~V~l~D~R~~-~---~s~~~wk~~g~VEkv~w~~~-----se~~f~~~tddG~v~~~D~R~~~~~vwt~~-- 370 (463)
T KOG0270|consen 302 LLSGSYDGTVALKDCRDP-S---NSGKEWKFDGEVEKVAWDPH-----SENSFFVSTDDGTVYYFDIRNPGKPVWTLK-- 370 (463)
T ss_pred EEeccccceEEeeeccCc-c---ccCceEEeccceEEEEecCC-----CceeEEEecCCceEEeeecCCCCCceeEEE--
Confidence 666667999998877631 1 21234667778877777654 3578889999999998877432 2322221
Q ss_pred ecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCCcccccceEEecC
Q psy14552 206 GLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGS 272 (290)
Q Consensus 206 ~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~ 272 (290)
. -..|.|=+-.+. .....|--|..|+++--++++..+....--+...||.
T Consensus 371 A-Hd~~ISgl~~n~----------------~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~r 420 (463)
T KOG0270|consen 371 A-HDDEISGLSVNI----------------QTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGR 420 (463)
T ss_pred e-ccCCcceEEecC----------------CCCcceeeccccceEEEEeecCCCCcccccccccccc
Confidence 1 112333322221 1112255588888888888866665443334445553
No 136
>KOG0263|consensus
Probab=51.13 E-value=1.2e+02 Score=31.62 Aligned_cols=64 Identities=22% Similarity=0.321 Sum_probs=45.8
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCC-ceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGI-LDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~-l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+..+..++-|..++.|.+..+.. +. +.+...+ ...|..++|.. ....|++|..|.+|.+|.+..
T Consensus 586 Sp~Gr~LaSg~ed~~I~iWDl~~--~~~v~~l~~H---t~ti~SlsFS~------dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 586 SPCGRYLASGDEDGLIKIWDLAN--GSLVKQLKGH---TGTIYSLSFSR------DGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred cCCCceEeecccCCcEEEEEcCC--Ccchhhhhcc---cCceeEEEEec------CCCEEEecCCCCeEEEEEchh
Confidence 66788888887889999988875 33 2222222 45677777763 257899999999999998753
No 137
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=49.83 E-value=3e+02 Score=28.06 Aligned_cols=75 Identities=19% Similarity=0.235 Sum_probs=49.9
Q ss_pred eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCC
Q psy14552 154 TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGP 233 (290)
Q Consensus 154 ~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~ 233 (290)
+++++..+.|.+..+. ...+++|+.||+|.+|..... .+... ...-+|..+.--
T Consensus 255 sipL~s~v~~ca~sp~------E~kLvlGC~DgSiiLyD~~~~--~t~~~--ka~~~P~~iaWH---------------- 308 (545)
T PF11768_consen 255 SIPLPSQVICCARSPS------EDKLVLGCEDGSIILYDTTRG--VTLLA--KAEFIPTLIAWH---------------- 308 (545)
T ss_pred EEecCCcceEEecCcc------cceEEEEecCCeEEEEEcCCC--eeeee--eecccceEEEEc----------------
Confidence 3458889999888654 578999999999999997543 22221 122344443322
Q ss_pred ccCCceEEEEEecCceEEEEEEe
Q psy14552 234 VTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 234 ~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
.....+.||-..|.+--|.+.
T Consensus 309 --p~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 309 --PDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred --CCCcEEEEEcCCceEEEEEee
Confidence 123458889899999888763
No 138
>KOG1517|consensus
Probab=49.81 E-value=4.1e+02 Score=29.61 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=41.4
Q ss_pred CCCEEEEEEeCCeEEEEEEc--CCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 123 NQRQIVIALQGGRLIYFEMH--PETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 123 ~~~~l~Val~~~~i~~l~l~--~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
++++++.|+.||.++++... + ...+....+..+-..-|.=+++.+. +-.-|+.|..||.|.++.+-
T Consensus 1220 ~gn~i~AGfaDGsvRvyD~R~a~-~ds~v~~~R~h~~~~~Iv~~slq~~-----G~~elvSgs~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAP-PDSLVCVYREHNDVEPIVHLSLQRQ-----GLGELVSGSQDGDIQLLDLR 1287 (1387)
T ss_pred CCceEEEeecCCceEEeecccCC-ccccceeecccCCcccceeEEeecC-----CCcceeeeccCCeEEEEecc
Confidence 35679999999999998644 3 1233333222221111555566532 23478999999999998874
No 139
>KOG0650|consensus
Probab=49.44 E-value=85 Score=32.27 Aligned_cols=55 Identities=22% Similarity=0.355 Sum_probs=41.6
Q ss_pred CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCC
Q psy14552 123 NQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADN 186 (290)
Q Consensus 123 ~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg 186 (290)
.+..++=|..|+++++.++.. + .++.+..++.+|-|+++.+.. ....|+|+..+.
T Consensus 411 ~G~wlasGsdDGtvriWEi~T--g---Rcvr~~~~d~~I~~vaw~P~~----~~~vLAvA~~~~ 465 (733)
T KOG0650|consen 411 SGEWLASGSDDGTVRIWEIAT--G---RCVRTVQFDSEIRSVAWNPLS----DLCVLAVAVGEC 465 (733)
T ss_pred CcceeeecCCCCcEEEEEeec--c---eEEEEEeecceeEEEEecCCC----CceeEEEEecCc
Confidence 344566666799999999875 3 334678899999999998875 367788887755
No 140
>KOG0321|consensus
Probab=49.38 E-value=80 Score=32.58 Aligned_cols=131 Identities=15% Similarity=0.115 Sum_probs=75.9
Q ss_pred CCCceecCCCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeC
Q psy14552 105 PVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLA 184 (290)
Q Consensus 105 ~~~~~~~~~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~ 184 (290)
+.+-|.+|-.....+|......++|+..++.|.+|........+++..-...+.+--+.+.+.... +...|+-..+
T Consensus 45 ~~~~p~pPf~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap----ge~~lVsasG 120 (720)
T KOG0321|consen 45 NDGLPVPPFADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP----GESLLVSASG 120 (720)
T ss_pred cCCCCCCCccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC----CceeEEEccC
Confidence 345677763333333333444599998888888875443111122210012355666667775443 3667777888
Q ss_pred CCeEEEEEeCCCCceeEeeEEecCCc--ceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCC
Q psy14552 185 DNTVRLISLAPQDCLKQKNLQGLPDL--AESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQT 258 (290)
Q Consensus 185 dg~v~i~~l~~~~~l~~~~~~~L~~~--p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~ 258 (290)
|.+++.|.++.. .+.-.. ..+|.. -.|+++..+ +...+--|-|||.++-+.+-..
T Consensus 121 DsT~r~Wdvk~s-~l~G~~-~~~GH~~SvkS~cf~~~-----------------n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 121 DSTIRPWDVKTS-RLVGGR-LNLGHTGSVKSECFMPT-----------------NPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred Cceeeeeeeccc-eeecce-eecccccccchhhhccC-----------------CCcceeeccCCCcEEEEEEecc
Confidence 999999999754 233322 344532 355555542 2223566999999998887543
No 141
>KOG0272|consensus
Probab=48.47 E-value=1.2e+02 Score=29.71 Aligned_cols=65 Identities=17% Similarity=0.132 Sum_probs=44.4
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
+.|+-+++-|..|+++.+..|... ..+..+..+ .+.|+=+.+.+. ...||+-+..|+++.+|+-+
T Consensus 354 sPNGy~lATgs~Dnt~kVWDLR~r-~~ly~ipAH---~nlVS~Vk~~p~-----~g~fL~TasyD~t~kiWs~~ 418 (459)
T KOG0272|consen 354 SPNGYHLATGSSDNTCKVWDLRMR-SELYTIPAH---SNLVSQVKYSPQ-----EGYFLVTASYDNTVKIWSTR 418 (459)
T ss_pred CCCceEEeecCCCCcEEEeeeccc-ccceecccc---cchhhheEeccc-----CCeEEEEcccCcceeeecCC
Confidence 567777888888999999877652 223222222 245555666652 25788888899999999854
No 142
>KOG0286|consensus
Probab=48.11 E-value=2.4e+02 Score=26.56 Aligned_cols=179 Identities=13% Similarity=0.158 Sum_probs=93.5
Q ss_pred CCccCCCCeEEEEeeCCCe-EEEEecC---CeEEEeecCcceeeeccCCCCCceE-EEEee-cCceEEEEeeCCeEEEEE
Q psy14552 29 SGFYGTTPTLCCSAMGDNS-IVQVYPD---GIRHIGAKNTTWKVSDKKESDKKKI-VRCAV-NQRQIVIALQGGRLIYFE 102 (290)
Q Consensus 29 ~gf~~~~~Ti~~~~~~~~~-ivQVt~~---~v~l~~~~~~~~~~~~~~~~~~~~I-v~as~-n~~qv~ial~~g~i~~~~ 102 (290)
+.|.++.+-++||=+.+.. |.-+... +..-+..+ .+...-. .+|.. +|.|++-+-.+.+..+
T Consensus 103 CA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~----------l~gHtgylScC~f~dD~~ilT~SGD~TCal-- 170 (343)
T KOG0286|consen 103 CAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRE----------LAGHTGYLSCCRFLDDNHILTGSGDMTCAL-- 170 (343)
T ss_pred EEECCCCCeEEecCcCceeEEEecccccccccceeeee----------ecCccceeEEEEEcCCCceEecCCCceEEE--
Confidence 6899999999999987753 6555522 21111100 1122222 22222 2566655543333332
Q ss_pred ecCCCceecCCCceE---------EEE-E--e-CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeee-cCcceeEEEeee
Q psy14552 103 MHPVSDKKESDKKKI---------VRC-A--V-NQRQIVIALQGGRLIYFEMHPETGILDECSETIQ-MESEVLCMALSN 168 (290)
Q Consensus 103 ~~~~~~~~~~~~~~I---------i~a-s--~-~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~-l~~ei~~l~i~~ 168 (290)
|..+.+..+ +.+ + . +.+..+-|.-|..-.+..+.. +.- .+... -+.+|-.+.|.|
T Consensus 171 ------WDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~--~~c---~qtF~ghesDINsv~ffP 239 (343)
T KOG0286|consen 171 ------WDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS--GQC---VQTFEGHESDINSVRFFP 239 (343)
T ss_pred ------EEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccC--cce---eEeecccccccceEEEcc
Confidence 444333332 111 1 1 222333333344444444443 211 11222 356777788875
Q ss_pred CCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCc
Q psy14552 169 APSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNG 248 (290)
Q Consensus 169 ~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG 248 (290)
.. .-++.|..|++.+.|.|-.+..+...+......-..|+.+.. .+.+ ||+|-.|.
T Consensus 240 ~G------~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~-----------------SGRl-Lfagy~d~ 295 (343)
T KOG0286|consen 240 SG------DAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSK-----------------SGRL-LFAGYDDF 295 (343)
T ss_pred CC------CeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcc-----------------cccE-EEeeecCC
Confidence 42 346677889999999997655566654333333335655543 3454 99999999
Q ss_pred eEEEEE
Q psy14552 249 ALLRMV 254 (290)
Q Consensus 249 ~l~~~~ 254 (290)
.+..+.
T Consensus 296 ~c~vWD 301 (343)
T KOG0286|consen 296 TCNVWD 301 (343)
T ss_pred ceeEee
Confidence 887653
No 143
>PTZ00420 coronin; Provisional
Probab=47.54 E-value=3.3e+02 Score=27.90 Aligned_cols=108 Identities=11% Similarity=0.066 Sum_probs=63.9
Q ss_pred ceEEEEeec---CceEEEEeeCCeEEEEEecCCCce---------ecC-CCceEEEE--EeCCCEE-EEEEeCCeEEEEE
Q psy14552 77 KKIVRCAVN---QRQIVIALQGGRLIYFEMHPVSDK---------KES-DKKKIVRC--AVNQRQI-VIALQGGRLIYFE 140 (290)
Q Consensus 77 ~~Iv~as~n---~~qv~ial~~g~i~~~~~~~~~~~---------~~~-~~~~Ii~a--s~~~~~l-~Val~~~~i~~l~ 140 (290)
..|..++.+ +.+++.+..+|.|....+...... ... ....+.++ +.++..+ +.|..|++|+++.
T Consensus 75 ~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWD 154 (568)
T PTZ00420 75 SSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWD 154 (568)
T ss_pred CCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEE
Confidence 345556555 346666677888877766432110 001 11223222 2334444 4556799999998
Q ss_pred EcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 141 MHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 141 l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+.. +. .. ..+..+..|.++++.+. ..+|++|+.|+.+++|.+..
T Consensus 155 l~t--g~--~~-~~i~~~~~V~Slswspd------G~lLat~s~D~~IrIwD~Rs 198 (568)
T PTZ00420 155 IEN--EK--RA-FQINMPKKLSSLKWNIK------GNLLSGTCVGKHMHIIDPRK 198 (568)
T ss_pred CCC--Cc--EE-EEEecCCcEEEEEECCC------CCEEEEEecCCEEEEEECCC
Confidence 875 22 11 12345677888888643 35777888899999999764
No 144
>KOG4378|consensus
Probab=47.07 E-value=3.2e+02 Score=27.68 Aligned_cols=154 Identities=18% Similarity=0.274 Sum_probs=83.8
Q ss_pred CCceEEEEeec--CceEEEEeeCCeEEEEEecCC---CceecCCCceE--EEEEeCCCE-EEEEEeCCeEEEEEEcCCCC
Q psy14552 75 DKKKIVRCAVN--QRQIVIALQGGRLIYFEMHPV---SDKKESDKKKI--VRCAVNQRQ-IVIALQGGRLIYFEMHPETG 146 (290)
Q Consensus 75 ~~~~Iv~as~n--~~qv~ial~~g~i~~~~~~~~---~~~~~~~~~~I--i~as~~~~~-l~Val~~~~i~~l~l~~~~~ 146 (290)
-..+|..+..| |.|++=.-.+|+|+....... ..+..+.+..+ +--+..... +..+..+|.+.+......+.
T Consensus 120 h~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp 199 (673)
T KOG4378|consen 120 HQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSP 199 (673)
T ss_pred CcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCc
Confidence 34667777766 999998889999987765432 23333444333 222333333 45555677888877654222
Q ss_pred CceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeC-CCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCC
Q psy14552 147 ILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLA-DNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPT 225 (290)
Q Consensus 147 ~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~-dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~ 225 (290)
.+ ...+..+-|..=.|+ .+. ...|+|.-+ |-.|.+|..... .+... .. -..|-|-+ .|
T Consensus 200 ~~-~~~~~HsAP~~gicf--sps------ne~l~vsVG~Dkki~~yD~~s~-~s~~~--l~-y~~Plstv--af------ 258 (673)
T KOG4378|consen 200 IF-HASEAHSAPCRGICF--SPS------NEALLVSVGYDKKINIYDIRSQ-ASTDR--LT-YSHPLSTV--AF------ 258 (673)
T ss_pred cc-chhhhccCCcCccee--cCC------ccceEEEecccceEEEeecccc-cccce--ee-ecCCccee--ee------
Confidence 11 222233445555443 333 233444433 788888876421 11111 00 11232222 22
Q ss_pred CCCCCCCCccCCceEEEEEecCceEEEEEEeCC
Q psy14552 226 SSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQT 258 (290)
Q Consensus 226 ~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~ 258 (290)
.+...||-+|.-+|.++-|.+...
T Consensus 259 ---------~~~G~~L~aG~s~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 259 ---------SECGTYLCAGNSKGELIAYDMRST 282 (673)
T ss_pred ---------cCCceEEEeecCCceEEEEecccC
Confidence 146788999999999999987543
No 145
>KOG2096|consensus
Probab=46.43 E-value=2.2e+02 Score=27.22 Aligned_cols=66 Identities=6% Similarity=0.125 Sum_probs=42.1
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceee--e-eeeecCcceeEEEeeeCCCCCccccEEEEEeCC-CeEEEEEeCC
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDEC--S-ETIQMESEVLCMALSNAPSGEQMSRFLAVGLAD-NTVRLISLAP 195 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~--~-~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~d-g~v~i~~l~~ 195 (290)
+.++..++-++.|++|+++.+++ -...+. + ..++.+ -++.+.|.+. -.-++|.+.+ .++.+|.+..
T Consensus 95 sSdGK~lat~~~Dr~Ir~w~~~D--F~~~eHr~~R~nve~d-hpT~V~FapD------c~s~vv~~~~g~~l~vyk~~K 164 (420)
T KOG2096|consen 95 SSDGKKLATISGDRSIRLWDVRD--FENKEHRCIRQNVEYD-HPTRVVFAPD------CKSVVVSVKRGNKLCVYKLVK 164 (420)
T ss_pred cCCCceeEEEeCCceEEEEecch--hhhhhhhHhhccccCC-CceEEEECCC------cceEEEEEccCCEEEEEEeee
Confidence 67788888888899999999886 111111 1 122334 4677777653 3345566654 4888898864
No 146
>PTZ00421 coronin; Provisional
Probab=46.36 E-value=3.2e+02 Score=27.35 Aligned_cols=109 Identities=8% Similarity=0.086 Sum_probs=56.6
Q ss_pred ceEEEEeecC---ceEEEEeeCCeEEEEEecCCCceec-CCC-ceEEEE--EeCCCEEEEEEeCCeEEEEEEcCCCCCce
Q psy14552 77 KKIVRCAVNQ---RQIVIALQGGRLIYFEMHPVSDKKE-SDK-KKIVRC--AVNQRQIVIALQGGRLIYFEMHPETGILD 149 (290)
Q Consensus 77 ~~Iv~as~n~---~qv~ial~~g~i~~~~~~~~~~~~~-~~~-~~Ii~a--s~~~~~l~Val~~~~i~~l~l~~~~~~l~ 149 (290)
..|..++.+. +.++.+-.+|.|....+........ ..+ ..|.++ +.++..++.++.|+.|+++.+.. +..
T Consensus 126 ~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs--g~~- 202 (493)
T PTZ00421 126 KKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD--GTI- 202 (493)
T ss_pred CcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCC--CcE-
Confidence 4455556652 3555566678887776653221111 111 123222 44566788888899999998764 321
Q ss_pred eeeeeeec-Cc-ceeEEEeeeCCCCCccccEEEEEe---CCCeEEEEEeCC
Q psy14552 150 ECSETIQM-ES-EVLCMALSNAPSGEQMSRFLAVGL---ADNTVRLISLAP 195 (290)
Q Consensus 150 ~~~~~~~l-~~-ei~~l~i~~~~~~~~~~~~l~VGl---~dg~v~i~~l~~ 195 (290)
...... .. ....+.+.+. ...++.+|. .|+.|.+|.+..
T Consensus 203 --v~tl~~H~~~~~~~~~w~~~-----~~~ivt~G~s~s~Dr~VklWDlr~ 246 (493)
T PTZ00421 203 --VSSVEAHASAKSQRCLWAKR-----KDLIITLGCSKSQQRQIMLWDTRK 246 (493)
T ss_pred --EEEEecCCCCcceEEEEcCC-----CCeEEEEecCCCCCCeEEEEeCCC
Confidence 111211 11 1122222211 234555664 389999999853
No 147
>KOG0315|consensus
Probab=46.25 E-value=2.5e+02 Score=26.04 Aligned_cols=131 Identities=15% Similarity=0.179 Sum_probs=77.1
Q ss_pred CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecC-cceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEe
Q psy14552 124 QRQIVIALQGGRLIYFEMHPETGILDECSETIQME-SEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQK 202 (290)
Q Consensus 124 ~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~-~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~ 202 (290)
+..+++|. ...||++.+...+. ....+++.+ ..|+.+.|... ..++.-|..||++.+|.+-. +.--
T Consensus 52 k~~LAaa~-~qhvRlyD~~S~np---~Pv~t~e~h~kNVtaVgF~~d------grWMyTgseDgt~kIWdlR~---~~~q 118 (311)
T KOG0315|consen 52 KKDLAAAG-NQHVRLYDLNSNNP---NPVATFEGHTKNVTAVGFQCD------GRWMYTGSEDGTVKIWDLRS---LSCQ 118 (311)
T ss_pred cchhhhcc-CCeeEEEEccCCCC---CceeEEeccCCceEEEEEeec------CeEEEecCCCceEEEEeccC---cccc
Confidence 34466664 56799998875322 122345554 78999988743 57999999999999999853 2111
Q ss_pred eEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCC--Ccc-----cccceEEecCcce
Q psy14552 203 NLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTS--GDL-----SDNRMRYLGSRPV 275 (290)
Q Consensus 203 ~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~--~~l-----~~~~~~~lG~~pv 275 (290)
+..... .|..-++.+ -+...|+.|-++|.+--+.+.... .+| ...++..++..--
T Consensus 119 R~~~~~-spVn~vvlh-----------------pnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgs 180 (311)
T KOG0315|consen 119 RNYQHN-SPVNTVVLH-----------------PNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGS 180 (311)
T ss_pred hhccCC-CCcceEEec-----------------CCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCc
Confidence 111222 232222332 245569999999999888774332 122 2234455555555
Q ss_pred EEEEEEeCCc
Q psy14552 276 KLFKIRCQGN 285 (290)
Q Consensus 276 ~l~~~~~~~~ 285 (290)
++.....+|+
T Consensus 181 ml~a~nnkG~ 190 (311)
T KOG0315|consen 181 MLAAANNKGN 190 (311)
T ss_pred EEEEecCCcc
Confidence 5555544443
No 148
>KOG0284|consensus
Probab=45.51 E-value=43 Score=32.68 Aligned_cols=93 Identities=13% Similarity=0.196 Sum_probs=0.0
Q ss_pred ceEEEEeecCceEEEEeeCCeEEEEEecCCCceecCCCceEEEEE--------------------------------eCC
Q psy14552 77 KKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA--------------------------------VNQ 124 (290)
Q Consensus 77 ~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~Ii~as--------------------------------~~~ 124 (290)
..++.+|.|...-.|. .-.|.+ +++++++++ .++
T Consensus 85 tKf~h~s~NKvkc~V~-------------~v~WtP-eGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g 150 (464)
T KOG0284|consen 85 TKFVHTSSNKVKCPVN-------------VVRWTP-EGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNG 150 (464)
T ss_pred cceEecccccccccee-------------eEEEcC-CCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCC
Q ss_pred CEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 125 ~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
.+++=|..++.|.|..... .....+ ...-..+|-+++|.+. ....+-...||++.+|..
T Consensus 151 ~wmiSgD~gG~iKyWqpnm--nnVk~~--~ahh~eaIRdlafSpn------DskF~t~SdDg~ikiWdf 209 (464)
T KOG0284|consen 151 TWMISGDKGGMIKYWQPNM--NNVKII--QAHHAEAIRDLAFSPN------DSKFLTCSDDGTIKIWDF 209 (464)
T ss_pred CEEEEcCCCceEEecccch--hhhHHh--hHhhhhhhheeccCCC------CceeEEecCCCeEEEEec
No 149
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=44.13 E-value=1.3e+02 Score=26.59 Aligned_cols=83 Identities=16% Similarity=0.124 Sum_probs=50.2
Q ss_pred eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCc-eeEeeEEe-cC-------CcceEEEEEEecCCCC
Q psy14552 154 TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC-LKQKNLQG-LP-------DLAESLVMIEMGASDP 224 (290)
Q Consensus 154 ~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~-l~~~~~~~-L~-------~~p~Sl~~~~~~~~~~ 224 (290)
++.+++.++.+.. ...||.+=+.+|.+++|++..... +..++... |. .....+..+.+.+
T Consensus 8 ~i~Lgs~~~~l~~--------~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~--- 76 (219)
T PF07569_consen 8 PIVLGSPVSFLEC--------NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTS--- 76 (219)
T ss_pred cEecCCceEEEEe--------CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcC---
Confidence 3556777777654 257898889999999999975321 22211111 11 1224444555421
Q ss_pred CCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCC
Q psy14552 225 TSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG 260 (290)
Q Consensus 225 ~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~ 260 (290)
.|. .+|.|.||.-+.|..+-.+.
T Consensus 77 -----------~G~--PiV~lsng~~y~y~~~L~~W 99 (219)
T PF07569_consen 77 -----------NGV--PIVTLSNGDSYSYSPDLGCW 99 (219)
T ss_pred -----------CCC--EEEEEeCCCEEEecccccee
Confidence 344 46778999988887766555
No 150
>KOG0301|consensus
Probab=43.94 E-value=3.9e+02 Score=28.05 Aligned_cols=57 Identities=26% Similarity=0.331 Sum_probs=35.2
Q ss_pred EEEEEeC-CCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEe
Q psy14552 178 FLAVGLA-DNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 178 ~l~VGl~-dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
-++|.++ |+++++|+.++ +...+ .+++. |+=-+.... .+ -+.+|=-||.+.-|..+
T Consensus 232 ~~Ivs~gEDrtlriW~~~e--~~q~I---~lPtt--siWsa~~L~--------------Ng--DIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 232 GLIVSTGEDRTLRIWKKDE--CVQVI---TLPTT--SIWSAKVLL--------------NG--DIVVGGSDGRVRVFTVD 288 (745)
T ss_pred CeEEEecCCceEEEeecCc--eEEEE---ecCcc--ceEEEEEee--------------CC--CEEEeccCceEEEEEec
Confidence 3556664 99999999762 33333 34443 333222211 11 28999999999999987
Q ss_pred C
Q psy14552 257 Q 257 (290)
Q Consensus 257 ~ 257 (290)
.
T Consensus 289 k 289 (745)
T KOG0301|consen 289 K 289 (745)
T ss_pred c
Confidence 3
No 151
>KOG0271|consensus
Probab=43.66 E-value=1e+02 Score=30.05 Aligned_cols=58 Identities=12% Similarity=0.193 Sum_probs=39.0
Q ss_pred EEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 127 IVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
++-+..|+.+++..+.. +...-.+ .--...|+|+.-+ +..++.-|..|++|.+|....
T Consensus 220 las~skDg~vrIWd~~~--~~~~~~l--sgHT~~VTCvrwG-------G~gliySgS~DrtIkvw~a~d 277 (480)
T KOG0271|consen 220 LASSSKDGSVRIWDTKL--GTCVRTL--SGHTASVTCVRWG-------GEGLIYSGSQDRTIKVWRALD 277 (480)
T ss_pred eecccCCCCEEEEEccC--ceEEEEe--ccCccceEEEEEc-------CCceEEecCCCceEEEEEccc
Confidence 44444589999987754 2211111 1124578999875 478999999999999998653
No 152
>KOG0302|consensus
Probab=43.40 E-value=3.2e+02 Score=26.63 Aligned_cols=90 Identities=16% Similarity=0.291 Sum_probs=53.6
Q ss_pred EEEEEeCCeEEEEEEcCCCCCceeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC--CC-CceeEe
Q psy14552 127 IVIALQGGRLIYFEMHPETGILDECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA--PQ-DCLKQK 202 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~~~~l~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~--~~-~~l~~~ 202 (290)
++-|..+|++.+..|..- +.....+... --.-|+|+...|.+ ...++++..|..+-+|.|. ++ +...+-
T Consensus 317 LasG~DdGt~~iwDLR~~--~~~~pVA~fk~Hk~pItsieW~p~e-----~s~iaasg~D~QitiWDlsvE~D~ee~~~~ 389 (440)
T KOG0302|consen 317 LASGGDDGTLSIWDLRQF--KSGQPVATFKYHKAPITSIEWHPHE-----DSVIAASGEDNQITIWDLSVEADEEEIDQE 389 (440)
T ss_pred eeecCCCceEEEEEhhhc--cCCCcceeEEeccCCeeEEEecccc-----CceEEeccCCCcEEEEEeeccCChhhhccc
Confidence 444445778888776641 1111111222 23568899987654 4577888889999998764 22 111112
Q ss_pred eEEecCCcceEEEEEEecCCC
Q psy14552 203 NLQGLPDLAESLVMIEMGASD 223 (290)
Q Consensus 203 ~~~~L~~~p~Sl~~~~~~~~~ 223 (290)
..+.|-.+|.-|+++.++..+
T Consensus 390 a~~~L~dlPpQLLFVHqGQke 410 (440)
T KOG0302|consen 390 AAEGLQDLPPQLLFVHQGQKE 410 (440)
T ss_pred cccchhcCCceeEEEecchhH
Confidence 223355689999999987653
No 153
>KOG1407|consensus
Probab=43.09 E-value=2.8e+02 Score=25.81 Aligned_cols=133 Identities=17% Similarity=0.211 Sum_probs=75.6
Q ss_pred EEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 118 VRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 118 i~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
++++..+.+++++-.|..|.++.... . .+.+..+++.++-=++... ...+.+.-.+.|.|.+++.+
T Consensus 112 i~wsp~g~~~~~~~kdD~it~id~r~--~---~~~~~~~~~~e~ne~~w~~------~nd~Fflt~GlG~v~ILsyp--- 177 (313)
T KOG1407|consen 112 ITWSPDGEYIAVGNKDDRITFIDART--Y---KIVNEEQFKFEVNEISWNN------SNDLFFLTNGLGCVEILSYP--- 177 (313)
T ss_pred EEEcCCCCEEEEecCcccEEEEEecc--c---ceeehhcccceeeeeeecC------CCCEEEEecCCceEEEEecc---
Confidence 55577778888887777777765543 1 1122233444433233321 23455555568999999987
Q ss_pred ceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCCcccccceEEecCcceEE
Q psy14552 198 CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVKL 277 (290)
Q Consensus 198 ~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~l 277 (290)
.|+++ +++.+=|..-..++|.. ..-|+-+|-.|-.+==+.++. |-.-|+..==.-||+-
T Consensus 178 sLkpv--~si~AH~snCicI~f~p---------------~GryfA~GsADAlvSLWD~~E----LiC~R~isRldwpVRT 236 (313)
T KOG1407|consen 178 SLKPV--QSIKAHPSNCICIEFDP---------------DGRYFATGSADALVSLWDVDE----LICERCISRLDWPVRT 236 (313)
T ss_pred ccccc--cccccCCcceEEEEECC---------------CCceEeeccccceeeccChhH----hhhheeeccccCceEE
Confidence 36665 45555565555566532 234688888887655454433 3333333333457777
Q ss_pred EEEEeCCc
Q psy14552 278 FKIRCQGN 285 (290)
Q Consensus 278 ~~~~~~~~ 285 (290)
..|...|+
T Consensus 237 lSFS~dg~ 244 (313)
T KOG1407|consen 237 LSFSHDGR 244 (313)
T ss_pred EEeccCcc
Confidence 66666654
No 154
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=42.54 E-value=2.2e+02 Score=27.96 Aligned_cols=21 Identities=24% Similarity=0.206 Sum_probs=18.0
Q ss_pred cccEEEEEeCCCeEEEEEeCC
Q psy14552 175 MSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 175 ~~~~l~VGl~dg~v~i~~l~~ 195 (290)
....++||+.+|.|++|+...
T Consensus 78 dw~~I~VG~ssG~vrfyte~G 98 (415)
T PF14655_consen 78 DWTCIAVGTSSGYVRFYTENG 98 (415)
T ss_pred CcEEEEEEecccEEEEEeccc
Confidence 468999999999999999643
No 155
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=41.72 E-value=2.7e+02 Score=27.11 Aligned_cols=66 Identities=21% Similarity=0.379 Sum_probs=40.8
Q ss_pred CeEEEEEeCCC-CceeEeeEEe--cC---CcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEE-eCC
Q psy14552 186 NTVRLISLAPQ-DCLKQKNLQG--LP---DLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV-DQT 258 (290)
Q Consensus 186 g~v~i~~l~~~-~~l~~~~~~~--L~---~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~-d~~ 258 (290)
..|.+|.+++. ..|+.+.... +. ..|.-+|+.+- ...+..|.|+.-++|.+.-|++ +..
T Consensus 127 n~l~~f~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~--------------~~~g~~ya~v~~k~G~~~Qy~L~~~~ 192 (381)
T PF02333_consen 127 NSLRLFRIDPDTGELTDVTDPAAPIATDLSEPYGLCLYRS--------------PSTGALYAFVNGKDGRVEQYELTDDG 192 (381)
T ss_dssp -EEEEEEEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE---------------TTT--EEEEEEETTSEEEEEEEEE-T
T ss_pred CeEEEEEecCCCCcceEcCCCCcccccccccceeeEEeec--------------CCCCcEEEEEecCCceEEEEEEEeCC
Confidence 47999999875 3465542111 11 13567777762 1246789999999999999999 456
Q ss_pred CCccccc
Q psy14552 259 SGDLSDN 265 (290)
Q Consensus 259 ~~~l~~~ 265 (290)
.|.++.+
T Consensus 193 ~g~v~~~ 199 (381)
T PF02333_consen 193 DGKVSAT 199 (381)
T ss_dssp TSSEEEE
T ss_pred CCcEeeE
Confidence 6665443
No 156
>KOG1963|consensus
Probab=41.42 E-value=2.4e+02 Score=29.96 Aligned_cols=71 Identities=17% Similarity=0.207 Sum_probs=45.3
Q ss_pred EEEEeCCCEEEEEEeCCeEEEEE-EcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 118 VRCAVNQRQIVIALQGGRLIYFE-MHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 118 i~as~~~~~l~Val~~~~i~~l~-l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
.+++.+++.++.|-.||.|++.. ...+........-+. --.++.++++... ..||.-|.++|.+.+|+++.
T Consensus 211 ~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHW-H~~~V~~L~fS~~------G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 211 VALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHW-HHDEVNSLSFSSD------GAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred EEeccccceEEEeccCCcEEEEeccccccccccceEEEe-cccccceeEEecC------CceEeecccceEEEEEeecC
Confidence 44467788888887888887642 220001111111012 1358889988743 47999999999999999864
No 157
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=41.27 E-value=55 Score=17.48 Aligned_cols=27 Identities=30% Similarity=0.450 Sum_probs=18.9
Q ss_pred cceeEEEeeeCCCCCccccEEEEEeCCCeEEEE
Q psy14552 159 SEVLCMALSNAPSGEQMSRFLAVGLADNTVRLI 191 (290)
Q Consensus 159 ~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~ 191 (290)
..+.++.+.+. ..+++.|..||.+.+|
T Consensus 13 ~~i~~~~~~~~------~~~~~~~~~d~~~~~~ 39 (40)
T smart00320 13 GPVTSVAFSPD------GKYLASASDDGTIKLW 39 (40)
T ss_pred CceeEEEECCC------CCEEEEecCCCeEEEc
Confidence 45667776532 3678888889988776
No 158
>KOG0295|consensus
Probab=39.13 E-value=1.9e+02 Score=27.94 Aligned_cols=65 Identities=15% Similarity=0.218 Sum_probs=43.8
Q ss_pred CCE-EEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCc
Q psy14552 124 QRQ-IVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDC 198 (290)
Q Consensus 124 ~~~-l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~ 198 (290)
+.| +..+.+|.+|++.++.- +. .++.-....+=|.-++|.+ +..||+-...|+++++|.+....+
T Consensus 303 ~~~~l~s~SrDktIk~wdv~t--g~--cL~tL~ghdnwVr~~af~p------~Gkyi~ScaDDktlrvwdl~~~~c 368 (406)
T KOG0295|consen 303 GGQVLGSGSRDKTIKIWDVST--GM--CLFTLVGHDNWVRGVAFSP------GGKYILSCADDKTLRVWDLKNLQC 368 (406)
T ss_pred CccEEEeecccceEEEEeccC--Ce--EEEEEecccceeeeeEEcC------CCeEEEEEecCCcEEEEEecccee
Confidence 445 67777899999998874 32 2221123455565566653 368999999999999999975433
No 159
>KOG0264|consensus
Probab=38.36 E-value=2.7e+02 Score=27.38 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=41.5
Q ss_pred EEEEEeCCeEEEEEEcCCCCCceeeeeee-ecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 127 IVIALQGGRLIYFEMHPETGILDECSETI-QMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~~~~l~~~~~~~-~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+|-|..|++|.++.+.. |...+-+. .-..+|.++...|- ....|+.+..|+.+.+|.+..
T Consensus 288 lAT~S~D~tV~LwDlRn----L~~~lh~~e~H~dev~~V~WSPh-----~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 288 LATGSADKTVALWDLRN----LNKPLHTFEGHEDEVFQVEWSPH-----NETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred EEeccCCCcEEEeechh----cccCceeccCCCcceEEEEeCCC-----CCceeEecccCCcEEEEeccc
Confidence 56665699999998875 22222222 24568888888754 356777777899999999863
No 160
>KOG0771|consensus
Probab=38.27 E-value=1.5e+02 Score=28.77 Aligned_cols=87 Identities=23% Similarity=0.213 Sum_probs=50.2
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCcee
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~ 200 (290)
..+++.++.+-.|+.+|+++.+...-.+ ....-..||-.++|.+. ..+|+-=..| ..++|+.+....+.
T Consensus 153 ~~~gs~latgg~dg~lRv~~~Ps~~t~l----~e~~~~~eV~DL~FS~d------gk~lasig~d-~~~VW~~~~g~~~a 221 (398)
T KOG0771|consen 153 NGDGSKLATGGTDGTLRVWEWPSMLTIL----EEIAHHAEVKDLDFSPD------GKFLASIGAD-SARVWSVNTGAALA 221 (398)
T ss_pred cCCCCEeeeccccceEEEEecCcchhhh----hhHhhcCccccceeCCC------CcEEEEecCC-ceEEEEeccCchhh
Confidence 3445667777679999999877521112 22234578888998754 3444433446 88999987432222
Q ss_pred EeeEEecCCcceEEEEEEecC
Q psy14552 201 QKNLQGLPDLAESLVMIEMGA 221 (290)
Q Consensus 201 ~~~~~~L~~~p~Sl~~~~~~~ 221 (290)
... -...+..+..++|..
T Consensus 222 ~~t---~~~k~~~~~~cRF~~ 239 (398)
T KOG0771|consen 222 RKT---PFSKDEMFSSCRFSV 239 (398)
T ss_pred hcC---Ccccchhhhhceecc
Confidence 211 123455666666643
No 161
>KOG0285|consensus
Probab=35.65 E-value=1.8e+02 Score=28.14 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=45.9
Q ss_pred eeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCC---cceEEEEEEecCCCCCCCCCCCCCccCC
Q psy14552 161 VLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPD---LAESLVMIEMGASDPTSSDEPAGPVTLG 237 (290)
Q Consensus 161 i~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~---~p~Sl~~~~~~~~~~~~~~~~~~~~~~~ 237 (290)
|-|+++.| +..+++-|..|+++-+|.+... .| +..|.. ..+-+.+. ..
T Consensus 154 Vr~vavdP------~n~wf~tgs~DrtikIwDlatg-~L----kltltGhi~~vr~vavS------------------~r 204 (460)
T KOG0285|consen 154 VRSVAVDP------GNEWFATGSADRTIKIWDLATG-QL----KLTLTGHIETVRGVAVS------------------KR 204 (460)
T ss_pred EEEEeeCC------CceeEEecCCCceeEEEEcccC-eE----EEeecchhheeeeeeec------------------cc
Confidence 45677764 3679999999999999998632 11 123332 23444333 46
Q ss_pred ceEEEEEecCceEEEEEEe
Q psy14552 238 NLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 238 ~~~L~iGl~dG~l~~~~~d 256 (290)
.+|||++..|+.+--+.+.
T Consensus 205 HpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 205 HPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred CceEEEecCCCeeEEEech
Confidence 8999999999998888763
No 162
>KOG1240|consensus
Probab=35.22 E-value=2.5e+02 Score=31.58 Aligned_cols=70 Identities=13% Similarity=0.133 Sum_probs=41.1
Q ss_pred ccEEEEEeCCCeEEEEEeCCCC--ceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEE
Q psy14552 176 SRFLAVGLADNTVRLISLAPQD--CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRM 253 (290)
Q Consensus 176 ~~~l~VGl~dg~v~i~~l~~~~--~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~ 253 (290)
..+++-|..||+|.+|++.+.. .-...+.....-.-..+..+.|- .+..++-||.+||.+.-+
T Consensus 1061 ~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~---------------~~~~~~Av~t~DG~v~~~ 1125 (1431)
T KOG1240|consen 1061 TSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC---------------GNGDQFAVSTKDGSVRVL 1125 (1431)
T ss_pred CceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec---------------cCCCeEEEEcCCCeEEEE
Confidence 4678888889999999986421 11111112111011122222221 234568999999999999
Q ss_pred EEeCCCC
Q psy14552 254 VVDQTSG 260 (290)
Q Consensus 254 ~~d~~~~ 260 (290)
.+|..+.
T Consensus 1126 ~id~~~~ 1132 (1431)
T KOG1240|consen 1126 RIDHYNV 1132 (1431)
T ss_pred Ecccccc
Confidence 9988533
No 163
>KOG0286|consensus
Probab=35.03 E-value=4e+02 Score=25.21 Aligned_cols=69 Identities=7% Similarity=0.104 Sum_probs=41.3
Q ss_pred EEE-EeCCCEEEEEEeCCeEEEEEEcC-CCCCceeeeeeeec---CcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEE
Q psy14552 118 VRC-AVNQRQIVIALQGGRLIYFEMHP-ETGILDECSETIQM---ESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLIS 192 (290)
Q Consensus 118 i~a-s~~~~~l~Val~~~~i~~l~l~~-~~~~l~~~~~~~~l---~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~ 192 (290)
.+| +.+++.++.|--|+...++.+.. ++.-...+ ..++ ..=++|..+.+ ...|+-|.+|.+..+|.
T Consensus 102 tCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v--~r~l~gHtgylScC~f~d-------D~~ilT~SGD~TCalWD 172 (343)
T KOG0286|consen 102 TCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRV--SRELAGHTGYLSCCRFLD-------DNHILTGSGDMTCALWD 172 (343)
T ss_pred EEEECCCCCeEEecCcCceeEEEeccccccccccee--eeeecCccceeEEEEEcC-------CCceEecCCCceEEEEE
Confidence 444 56666677665577666666552 11111111 1222 34577888764 35788899999999999
Q ss_pred eCC
Q psy14552 193 LAP 195 (290)
Q Consensus 193 l~~ 195 (290)
++.
T Consensus 173 ie~ 175 (343)
T KOG0286|consen 173 IET 175 (343)
T ss_pred ccc
Confidence 864
No 164
>KOG0269|consensus
Probab=34.63 E-value=4.7e+02 Score=27.86 Aligned_cols=104 Identities=14% Similarity=0.139 Sum_probs=63.3
Q ss_pred EEEEEeCCeEEEEEEcCC--CCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeE
Q psy14552 127 IVIALQGGRLIYFEMHPE--TGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNL 204 (290)
Q Consensus 127 l~Val~~~~i~~l~l~~~--~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~ 204 (290)
++.+..++.|.+..+... ...+..+- +-.+.+-+++|.... ..+|+-|..||.|-.|.+-..+..
T Consensus 103 IAT~s~nG~i~vWdlnk~~rnk~l~~f~---EH~Rs~~~ldfh~te-----p~iliSGSQDg~vK~~DlR~~~S~----- 169 (839)
T KOG0269|consen 103 IATCSTNGVISVWDLNKSIRNKLLTVFN---EHERSANKLDFHSTE-----PNILISGSQDGTVKCWDLRSKKSK----- 169 (839)
T ss_pred heeecCCCcEEEEecCccccchhhhHhh---hhccceeeeeeccCC-----ccEEEecCCCceEEEEeeeccccc-----
Confidence 777666777887776641 01221211 235788899987653 578888889999999998643211
Q ss_pred EecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 205 QGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 205 ~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
..-...-+|+.-+.|-. ....+.+-+..+|+|-.|.+..
T Consensus 170 ~t~~~nSESiRDV~fsp--------------~~~~~F~s~~dsG~lqlWDlRq 208 (839)
T KOG0269|consen 170 STFRSNSESIRDVKFSP--------------GYGNKFASIHDSGYLQLWDLRQ 208 (839)
T ss_pred ccccccchhhhceeecc--------------CCCceEEEecCCceEEEeeccC
Confidence 11112445555555521 1234567778888888887743
No 165
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=34.11 E-value=4.6e+02 Score=25.74 Aligned_cols=118 Identities=18% Similarity=0.173 Sum_probs=76.6
Q ss_pred CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC------
Q psy14552 124 QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD------ 197 (290)
Q Consensus 124 ~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~------ 197 (290)
..+++||..+|.|+++.-.........++-..++..-|.-++.+.+..+ .....|+| +.-..+.+|++...+
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~-~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSG-SEDLQLAV-LHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCC-CCcceEEE-ecCCEEEEEEEEecCCCcccC
Confidence 4569999889999998654321112222224567778888888765322 13456666 888888888873221
Q ss_pred ---ceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEe
Q psy14552 198 ---CLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVD 256 (290)
Q Consensus 198 ---~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d 256 (290)
.|+.+-+-.|...+-+++.-.|++. .+..++.|=.-||.|.-|+=+
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~-------------~~~~~IcVQS~DG~L~~feqe 163 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGV-------------KGRDFICVQSMDGSLSFFEQE 163 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCC-------------CCceEEEEEecCceEEEEeCC
Confidence 2444444456666778888887644 346778999999999888643
No 166
>KOG0650|consensus
Probab=33.60 E-value=2.3e+02 Score=29.33 Aligned_cols=40 Identities=25% Similarity=0.373 Sum_probs=26.4
Q ss_pred cccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEE
Q psy14552 175 MSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMI 217 (290)
Q Consensus 175 ~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~ 217 (290)
+..+|+-|..||+|++|.+-..-|+. ...+....++++..
T Consensus 411 ~G~wlasGsdDGtvriWEi~TgRcvr---~~~~d~~I~~vaw~ 450 (733)
T KOG0650|consen 411 SGEWLASGSDDGTVRIWEIATGRCVR---TVQFDSEIRSVAWN 450 (733)
T ss_pred CcceeeecCCCCcEEEEEeecceEEE---EEeecceeEEEEec
Confidence 35799999999999999986433333 33444455555444
No 167
>KOG1188|consensus
Probab=33.40 E-value=4.5e+02 Score=25.31 Aligned_cols=174 Identities=15% Similarity=0.243 Sum_probs=89.9
Q ss_pred ceEEEEeeCCeEEEEEecCCCce---ec-C---CCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCc
Q psy14552 87 RQIVIALQGGRLIYFEMHPVSDK---KE-S---DKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMES 159 (290)
Q Consensus 87 ~qv~ial~~g~i~~~~~~~~~~~---~~-~---~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ 159 (290)
+-+++.+++|.+-.+.-+...-+ .. | .+++++.|+ ...-+..++.||+|+.+.+... .+...+.-+-.-+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~d-s~h~v~s~ssDG~Vr~wD~Rs~-~e~a~~~~~~~~~~ 118 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCD-SPHGVISCSSDGTVRLWDIRSQ-AESARISWTQQSGT 118 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCC-CCCeeEEeccCCeEEEEEeecc-hhhhheeccCCCCC
Confidence 66888999999988865432222 11 2 233334443 3333666667999999987752 21111110001134
Q ss_pred ceeEEEeeeCCCCCccccEEEEEeC----CCeEEEEEeCCCCceeEeeEEecCCc----ceEEEEEEecCCCCCCCCCCC
Q psy14552 160 EVLCMALSNAPSGEQMSRFLAVGLA----DNTVRLISLAPQDCLKQKNLQGLPDL----AESLVMIEMGASDPTSSDEPA 231 (290)
Q Consensus 160 ei~~l~i~~~~~~~~~~~~l~VGl~----dg~v~i~~l~~~~~l~~~~~~~L~~~----p~Sl~~~~~~~~~~~~~~~~~ 231 (290)
.-+|++... +...+++|+. +-.|.+|.+-..+. .|+.. --.+.-++|.+.
T Consensus 119 ~f~~ld~nc------k~~ii~~GtE~~~s~A~v~lwDvR~~qq-------~l~~~~eSH~DDVT~lrFHP~--------- 176 (376)
T KOG1188|consen 119 PFICLDLNC------KKNIIACGTELTRSDASVVLWDVRSEQQ-------LLRQLNESHNDDVTQLRFHPS--------- 176 (376)
T ss_pred cceEeeccC------cCCeEEeccccccCceEEEEEEeccccc-------hhhhhhhhccCcceeEEecCC---------
Confidence 445555432 3568888985 44666666643221 12211 112223334322
Q ss_pred CCccCCceEEEEEecCceEEEEEEeCCCC--ccc--------ccceEEecCcceEEEEEEeCCceeec
Q psy14552 232 GPVTLGNLYLYVGLQNGALLRMVVDQTSG--DLS--------DNRMRYLGSRPVKLFKIRCQGNEANY 289 (290)
Q Consensus 232 ~~~~~~~~~L~iGl~dG~l~~~~~d~~~~--~l~--------~~~~~~lG~~pv~l~~~~~~~~~~~~ 289 (290)
+.+ .|+=|--||.+--|.+...+. .|- -.+...+|..=-++..+.--+..+++
T Consensus 177 ----~pn-lLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ 239 (376)
T KOG1188|consen 177 ----DPN-LLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIY 239 (376)
T ss_pred ----CCC-eEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEE
Confidence 233 388999999998888743332 111 12344555443356555555555554
No 168
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=33.07 E-value=6.8e+02 Score=27.32 Aligned_cols=125 Identities=18% Similarity=0.208 Sum_probs=0.0
Q ss_pred CCCCceEEEEeecCceEEEEeeCCeE-EEEEecCCCcee-------------cCCCceEEEE--EeCCCEEEEEEeCCeE
Q psy14552 73 ESDKKKIVRCAVNQRQIVIALQGGRL-IYFEMHPVSDKK-------------ESDKKKIVRC--AVNQRQIVIALQGGRL 136 (290)
Q Consensus 73 ~~~~~~Iv~as~n~~qv~ial~~g~i-~~~~~~~~~~~~-------------~~~~~~Ii~a--s~~~~~l~Val~~~~i 136 (290)
+.....-.+.......+.+++..... ..++++....-. .....+|++. -....++++++.+|.|
T Consensus 20 ~~~~~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~Gdi 99 (928)
T PF04762_consen 20 PDLPITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASGDI 99 (928)
T ss_pred cccccceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCceE
Q ss_pred EEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecC
Q psy14552 137 IYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLP 208 (290)
Q Consensus 137 ~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~ 208 (290)
..+..++ ...-.++-.-=.++..|.|++..|. ...|++.+++|++...+-+ ++++.+..|.
T Consensus 100 ~~~~~~~-~~~~~~~E~VG~vd~GI~a~~WSPD------~Ella~vT~~~~l~~mt~~----fd~i~E~~l~ 160 (928)
T PF04762_consen 100 ILVREDP-DPDEDEIEIVGSVDSGILAASWSPD------EELLALVTGEGNLLLMTRD----FDPISEVPLD 160 (928)
T ss_pred EEEEccC-CCCCceeEEEEEEcCcEEEEEECCC------cCEEEEEeCCCEEEEEecc----ceEEEEeecC
No 169
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=32.44 E-value=5.2e+02 Score=25.75 Aligned_cols=75 Identities=24% Similarity=0.338 Sum_probs=40.3
Q ss_pred CCCEEEEEEeCCeEEEEEEcC---CCCCceeeeeeee---------c----------CcceeEEEeeeCCCCCccccEEE
Q psy14552 123 NQRQIVIALQGGRLIYFEMHP---ETGILDECSETIQ---------M----------ESEVLCMALSNAPSGEQMSRFLA 180 (290)
Q Consensus 123 ~~~~l~Val~~~~i~~l~l~~---~~~~l~~~~~~~~---------l----------~~ei~~l~i~~~~~~~~~~~~l~ 180 (290)
+...++|++.||.+..++.+. +.+...+....-. + +.....+++....- ....+|+
T Consensus 157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~ 234 (547)
T PF11715_consen 157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEI--NDDTFLF 234 (547)
T ss_dssp SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-------ETTTEEE
T ss_pred CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEeccee--CCCCEEE
Confidence 777899999999998888775 2122222110000 1 11222233322110 1367898
Q ss_pred EEeCCCeEEEEEeCCCCce
Q psy14552 181 VGLADNTVRLISLAPQDCL 199 (290)
Q Consensus 181 VGl~dg~v~i~~l~~~~~l 199 (290)
+-+.|+.+++|+++...++
T Consensus 235 tl~~D~~LRiW~l~t~~~~ 253 (547)
T PF11715_consen 235 TLSRDHTLRIWSLETGQCL 253 (547)
T ss_dssp EEETTSEEEEEETTTTCEE
T ss_pred EEeCCCeEEEEECCCCeEE
Confidence 8889999999999865543
No 170
>KOG1523|consensus
Probab=32.00 E-value=4.6e+02 Score=25.05 Aligned_cols=113 Identities=16% Similarity=0.196 Sum_probs=68.0
Q ss_pred eEEEEeec--CceEEEEeeCCeEEEEEecCCCceecC----CCceEEEE---EeCCCEEEEEEeCCeEEEEEEcCCCCCc
Q psy14552 78 KIVRCAVN--QRQIVIALQGGRLIYFEMHPVSDKKES----DKKKIVRC---AVNQRQIVIALQGGRLIYFEMHPETGIL 148 (290)
Q Consensus 78 ~Iv~as~n--~~qv~ial~~g~i~~~~~~~~~~~~~~----~~~~Ii~a---s~~~~~l~Val~~~~i~~l~l~~~~~~l 148 (290)
+|.+=+-| ..|+++...+.++..+++....-|++- ++-.++.+ +...++++-+..|..-++.+..++ +.-
T Consensus 12 pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~-~~W 90 (361)
T KOG1523|consen 12 PITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG-GTW 90 (361)
T ss_pred ceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCC-Cee
Confidence 35555555 567888888889998988744337662 22223444 334445554444544455555331 332
Q ss_pred eeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 149 DECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 149 ~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
...+.-+.+.+..+|+.-.+. ...++||.+-..+.++-+..++
T Consensus 91 kptlvLlRiNrAAt~V~WsP~------enkFAVgSgar~isVcy~E~EN 133 (361)
T KOG1523|consen 91 KPTLVLLRINRAATCVKWSPK------ENKFAVGSGARLISVCYYEQEN 133 (361)
T ss_pred ccceeEEEeccceeeEeecCc------CceEEeccCccEEEEEEEeccc
Confidence 222333457888999988754 5678899988888777775443
No 171
>KOG0640|consensus
Probab=31.78 E-value=65 Score=30.58 Aligned_cols=64 Identities=19% Similarity=0.297 Sum_probs=41.0
Q ss_pred EEEEE-EeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 126 QIVIA-LQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 126 ~l~Va-l~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
+++++ ..|++|.+|.+... +.....+.++--+.+-++++.|. ..||+||+.-.++++|.++.-+
T Consensus 185 ~ILiS~srD~tvKlFDfsK~--saKrA~K~~qd~~~vrsiSfHPs------GefllvgTdHp~~rlYdv~T~Q 249 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKT--SAKRAFKVFQDTEPVRSISFHPS------GEFLLVGTDHPTLRLYDVNTYQ 249 (430)
T ss_pred heEEeccCCCeEEEEecccH--HHHHHHHHhhccceeeeEeecCC------CceEEEecCCCceeEEecccee
Confidence 35554 45899999987641 11111112223345677888754 5799999999999999887433
No 172
>KOG1587|consensus
Probab=31.67 E-value=5.8e+02 Score=26.11 Aligned_cols=189 Identities=12% Similarity=0.159 Sum_probs=90.8
Q ss_pred CCceEEEEeec---CceEEEEeeCCeEEEEEecCCCceecCCCceEEEEE-----------eC--CCEEEEEEeCCeEEE
Q psy14552 75 DKKKIVRCAVN---QRQIVIALQGGRLIYFEMHPVSDKKESDKKKIVRCA-----------VN--QRQIVIALQGGRLIY 138 (290)
Q Consensus 75 ~~~~Iv~as~n---~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~Ii~as-----------~~--~~~l~Val~~~~i~~ 138 (290)
....+.++..+ ...++.-+-+|+|+..-.....+ .++......+++ .+ +..++.++.||.|..
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~-~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~ 319 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSD-TPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICS 319 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCC-CCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEee
Confidence 44456666666 34445556678887665432221 112221111110 11 223666667999888
Q ss_pred EEEcCCC----CCceeeee----eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC-CCceeEeeEEecCC
Q psy14552 139 FEMHPET----GILDECSE----TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP-QDCLKQKNLQGLPD 209 (290)
Q Consensus 139 l~l~~~~----~~l~~~~~----~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~-~~~l~~~~~~~L~~ 209 (290)
.+++.-+ ..+.+... .......+++++|.+.. ....+||+.+|.|+.-.-.. ....+.. ...+..
T Consensus 320 W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~-----p~~FiVGTe~G~v~~~~r~g~~~~~~~~-~~~~~~ 393 (555)
T KOG1587|consen 320 WDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTD-----PNHFIVGTEEGKVYKGCRKGYTPAPEVS-YKGHST 393 (555)
T ss_pred eeccccccchhhcccccccccccccccccceeeEeeccCC-----CceEEEEcCCcEEEEEeccCCccccccc-cccccc
Confidence 7665310 11111111 11245667788887553 45577999999888733221 1122111 011111
Q ss_pred ---cceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCCccc--ccceEEe------cCcceEEE
Q psy14552 210 ---LAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLS--DNRMRYL------GSRPVKLF 278 (290)
Q Consensus 210 ---~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~l~--~~~~~~l------G~~pv~l~ 278 (290)
-+-.+..+..+ .+....+|.+| |..+..+.-+..+.-|. +..+.++ =++|..|.
T Consensus 394 ~~~h~g~v~~v~~n-------------PF~~k~fls~g--DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~ 458 (555)
T KOG1587|consen 394 FITHIGPVYAVSRN-------------PFYPKNFLSVG--DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFA 458 (555)
T ss_pred ccccCcceEeeecC-------------CCccceeeeec--cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEE
Confidence 11122222211 24566778888 99998888764444332 2223333 14555555
Q ss_pred EEEeCCc
Q psy14552 279 KIRCQGN 285 (290)
Q Consensus 279 ~~~~~~~ 285 (290)
..+..|+
T Consensus 459 ~~d~~G~ 465 (555)
T KOG1587|consen 459 TVDGDGN 465 (555)
T ss_pred EEcCCCc
Confidence 5554443
No 173
>KOG0265|consensus
Probab=31.10 E-value=4.6e+02 Score=24.80 Aligned_cols=61 Identities=18% Similarity=0.306 Sum_probs=41.8
Q ss_pred CCEEEEEE-eCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCC
Q psy14552 124 QRQIVIAL-QGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAP 195 (290)
Q Consensus 124 ~~~l~Val-~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~ 195 (290)
+.+++.+- .|++++++.+... +..+..+-..+++.+.+.+. +.-+..|.-|+.|.+|.+-.
T Consensus 144 g~~lv~SgsdD~t~kl~D~R~k-----~~~~t~~~kyqltAv~f~d~------s~qv~sggIdn~ikvWd~r~ 205 (338)
T KOG0265|consen 144 GPQLVCSGSDDGTLKLWDIRKK-----EAIKTFENKYQLTAVGFKDT------SDQVISGGIDNDIKVWDLRK 205 (338)
T ss_pred CCeEEEecCCCceEEEEeeccc-----chhhccccceeEEEEEeccc------ccceeeccccCceeeecccc
Confidence 44554443 4889999988752 22234445788888888643 45678888899999998843
No 174
>KOG0308|consensus
Probab=30.76 E-value=5.3e+02 Score=26.96 Aligned_cols=71 Identities=21% Similarity=0.323 Sum_probs=46.6
Q ss_pred cceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCc
Q psy14552 159 SEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGN 238 (290)
Q Consensus 159 ~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~ 238 (290)
..|-++-+.+. ...++-|..||+|.+|+|..+.|+.... +.. +++=.... ....
T Consensus 214 dNVr~ll~~dD------Gt~~ls~sSDgtIrlWdLgqQrCl~T~~---vH~--e~VWaL~~---------------~~sf 267 (735)
T KOG0308|consen 214 DNVRVLLVNDD------GTRLLSASSDGTIRLWDLGQQRCLATYI---VHK--EGVWALQS---------------SPSF 267 (735)
T ss_pred cceEEEEEcCC------CCeEeecCCCceEEeeeccccceeeeEE---ecc--CceEEEee---------------CCCc
Confidence 45555555422 4678888999999999998766665532 111 11111221 1346
Q ss_pred eEEEEEecCceEEEEEE
Q psy14552 239 LYLYVGLQNGALLRMVV 255 (290)
Q Consensus 239 ~~L~iGl~dG~l~~~~~ 255 (290)
.++|-|=|||.+++-.+
T Consensus 268 ~~vYsG~rd~~i~~Tdl 284 (735)
T KOG0308|consen 268 THVYSGGRDGNIYRTDL 284 (735)
T ss_pred ceEEecCCCCcEEeccc
Confidence 77999999999999887
No 175
>KOG0271|consensus
Probab=30.74 E-value=5.3e+02 Score=25.34 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=63.6
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCce
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCL 199 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l 199 (290)
+.++..++-|+.|++|++..-. +++ ++...+. --.=|.+++.+|.... ....+|+-+..||++++|.+....+
T Consensus 166 sPDgk~iASG~~dg~I~lwdpk--tg~--~~g~~l~gH~K~It~Lawep~hl~-p~~r~las~skDg~vrIWd~~~~~~- 239 (480)
T KOG0271|consen 166 SPDGKKIASGSKDGSIRLWDPK--TGQ--QIGRALRGHKKWITALAWEPLHLV-PPCRRLASSSKDGSVRIWDTKLGTC- 239 (480)
T ss_pred CCCcchhhccccCCeEEEecCC--CCC--cccccccCcccceeEEeecccccC-CCccceecccCCCCEEEEEccCceE-
Confidence 4556667777788888877422 232 1111111 1235888888876421 2345788888899999999863211
Q ss_pred eEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEE
Q psy14552 200 KQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 200 ~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
...+..=--++..++- .+.-+++=|-+|+.+--++.
T Consensus 240 ----~~~lsgHT~~VTCvrw----------------GG~gliySgS~DrtIkvw~a 275 (480)
T KOG0271|consen 240 ----VRTLSGHTASVTCVRW----------------GGEGLIYSGSQDRTIKVWRA 275 (480)
T ss_pred ----EEEeccCccceEEEEE----------------cCCceEEecCCCceEEEEEc
Confidence 1223322223444443 23446888888888877764
No 176
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=30.47 E-value=3.1e+02 Score=22.65 Aligned_cols=42 Identities=10% Similarity=0.213 Sum_probs=29.0
Q ss_pred eeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 154 TIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 154 ~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
.+.+..+|+|++-.++.. ......|++|+.+..+. |.+..+.
T Consensus 43 ~LNin~~italaaG~l~~-~~~~D~LliGt~t~lla-YDV~~N~ 84 (136)
T PF14781_consen 43 FLNINQEITALAAGRLKP-DDGRDCLLIGTQTSLLA-YDVENNS 84 (136)
T ss_pred EEECCCceEEEEEEecCC-CCCcCEEEEeccceEEE-EEcccCc
Confidence 456778888888877642 23578999999766544 7876554
No 177
>KOG0322|consensus
Probab=30.33 E-value=1.9e+02 Score=26.94 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=39.4
Q ss_pred CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 124 QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 124 ~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
+.-++-|-||+.||+|+-..- .-| -+++..+ .-+-+++|.+. ...++.|..|+.|..|+|
T Consensus 263 ~KIlATAGWD~RiRVyswrtl-~pL-AVLkyHs--agvn~vAfspd------~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 263 GKILATAGWDHRIRVYSWRTL-NPL-AVLKYHS--AGVNAVAFSPD------CELMAAASKDARISLWKL 322 (323)
T ss_pred CcEEeecccCCcEEEEEeccC-Cch-hhhhhhh--cceeEEEeCCC------CchhhhccCCceEEeeec
Confidence 344788889999999986641 112 1122111 45666777532 578888889999999986
No 178
>KOG0281|consensus
Probab=30.12 E-value=3e+02 Score=26.63 Aligned_cols=64 Identities=20% Similarity=0.328 Sum_probs=42.1
Q ss_pred CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCce
Q psy14552 124 QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCL 199 (290)
Q Consensus 124 ~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l 199 (290)
...++-|..|.+|.+.++.. +++...+. .-.+-|+|+.. +..+++-|..|.++++|.+.-..+|
T Consensus 330 ~kyIVsASgDRTikvW~~st--~efvRtl~--gHkRGIAClQY--------r~rlvVSGSSDntIRlwdi~~G~cL 393 (499)
T KOG0281|consen 330 DKYIVSASGDRTIKVWSTST--CEFVRTLN--GHKRGIACLQY--------RDRLVVSGSSDNTIRLWDIECGACL 393 (499)
T ss_pred cceEEEecCCceEEEEeccc--eeeehhhh--cccccceehhc--------cCeEEEecCCCceEEEEeccccHHH
Confidence 34466666788999988764 33222111 13577888754 3567888888999999998643333
No 179
>KOG0288|consensus
Probab=29.91 E-value=4e+02 Score=26.23 Aligned_cols=46 Identities=7% Similarity=0.180 Sum_probs=30.1
Q ss_pred eCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeC
Q psy14552 122 VNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNA 169 (290)
Q Consensus 122 ~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~ 169 (290)
.++.+++-|..|+.|++.++.. +.++..++.-.-+..|.++++.+.
T Consensus 397 pd~~YvaAGS~dgsv~iW~v~t--gKlE~~l~~s~s~~aI~s~~W~~s 442 (459)
T KOG0288|consen 397 PDGSYVAAGSADGSVYIWSVFT--GKLEKVLSLSTSNAAITSLSWNPS 442 (459)
T ss_pred CCCceeeeccCCCcEEEEEccC--ceEEEEeccCCCCcceEEEEEcCC
Confidence 4566688887899999999875 556544322122336788887654
No 180
>KOG1445|consensus
Probab=29.59 E-value=1.6e+02 Score=30.80 Aligned_cols=69 Identities=20% Similarity=0.315 Sum_probs=44.3
Q ss_pred eCCCEEEEEEe--CCeEEEEEEcCCCCCceeee-eeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC
Q psy14552 122 VNQRQIVIALQ--GGRLIYFEMHPETGILDECS-ETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ 196 (290)
Q Consensus 122 ~~~~~l~Val~--~~~i~~l~l~~~~~~l~~~~-~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~ 196 (290)
+|+.+++|-+. ++.|-+|++.. -|.|.+-. -.+.-...|+=+...+++ ...|+||+.||.|.+|.+...
T Consensus 589 an~~rvAVPL~g~gG~iai~el~~-PGrLPDgv~p~l~Ngt~vtDl~WdPFD-----~~rLAVa~ddg~i~lWr~~a~ 660 (1012)
T KOG1445|consen 589 ANNKRVAVPLAGSGGVIAIYELNE-PGRLPDGVMPGLFNGTLVTDLHWDPFD-----DERLAVATDDGQINLWRLTAN 660 (1012)
T ss_pred eccceEEEEecCCCceEEEEEcCC-CCCCCcccccccccCceeeecccCCCC-----hHHeeecccCceEEEEEeccC
Confidence 45566777764 67899999986 25554421 011122344444555553 568999999999999999643
No 181
>KOG0273|consensus
Probab=29.51 E-value=5.9e+02 Score=25.55 Aligned_cols=146 Identities=15% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCCeEEEEeeCCCeEEEEecCCeEEEeecCcceeeeccCCCCCceEEEEeec--CceEEEEeeCCeEEEEEecCCCceec
Q psy14552 34 TTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIVRCAVN--QRQIVIALQGGRLIYFEMHPVSDKKE 111 (290)
Q Consensus 34 ~~~Ti~~~~~~~~~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~~Iv~as~n--~~qv~ial~~g~i~~~~~~~~~~~~~ 111 (290)
+.-|+.+--..+|.+.--+..+-.+...... ..+|.+.-=| ++|++=+-.+|+++++... .++|..
T Consensus 245 ~~G~~LatG~~~G~~riw~~~G~l~~tl~~H-----------kgPI~slKWnk~G~yilS~~vD~ttilwd~~-~g~~~q 312 (524)
T KOG0273|consen 245 NDGTLLATGSEDGEARIWNKDGNLISTLGQH-----------KGPIFSLKWNKKGTYILSGGVDGTTILWDAH-TGTVKQ 312 (524)
T ss_pred CCCCeEEEeecCcEEEEEecCchhhhhhhcc-----------CCceEEEEEcCCCCEEEeccCCccEEEEecc-CceEEE
Q ss_pred ----CCCceEEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeCCC
Q psy14552 112 ----SDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADN 186 (290)
Q Consensus 112 ----~~~~~Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg 186 (290)
-+...+-.--.+...++.+..|+.|++..++.+ ...++.. -..+|.++...+. ...|+-+..|+
T Consensus 313 ~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~-----~P~~t~~GH~g~V~alk~n~t------g~LLaS~SdD~ 381 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGED-----RPVKTFIGHHGEVNALKWNPT------GSLLASCSDDG 381 (524)
T ss_pred eeeeccCCccceEEecCceEeecCCCceEEEEEecCC-----CcceeeecccCceEEEEECCC------CceEEEecCCC
Q ss_pred eEEEEEeCCCCceeEe
Q psy14552 187 TVRLISLAPQDCLKQK 202 (290)
Q Consensus 187 ~v~i~~l~~~~~l~~~ 202 (290)
++.+|+.....+....
T Consensus 382 TlkiWs~~~~~~~~~l 397 (524)
T KOG0273|consen 382 TLKIWSMGQSNSVHDL 397 (524)
T ss_pred eeEeeecCCCcchhhh
No 182
>KOG3630|consensus
Probab=29.31 E-value=1.4e+02 Score=33.12 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=62.1
Q ss_pred CCCceEEEEeec-C--ceEEEEeeCCeEEEEE-ecCCCc--eec--C--------CCceEEEE-EeCC---CEEEEEEeC
Q psy14552 74 SDKKKIVRCAVN-Q--RQIVIALQGGRLIYFE-MHPVSD--KKE--S--------DKKKIVRC-AVNQ---RQIVIALQG 133 (290)
Q Consensus 74 ~~~~~Iv~as~n-~--~qv~ial~~g~i~~~~-~~~~~~--~~~--~--------~~~~Ii~a-s~~~---~~l~Val~~ 133 (290)
+....|+.-.++ | -++++..++|+.+|+. +..... +.. | +...+..| --|. ...+|.+.|
T Consensus 98 ~k~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~d 177 (1405)
T KOG3630|consen 98 EKEIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSD 177 (1405)
T ss_pred eccccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccc
Confidence 444555544444 3 6888888899888863 111110 000 0 00001111 1111 125666678
Q ss_pred CeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEe
Q psy14552 134 GRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISL 193 (290)
Q Consensus 134 ~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l 193 (290)
..|+++.+... -..+ +...+....+|++..+. ...|+||-.+|++.-|..
T Consensus 178 lsl~V~~~~~~---~~~v-~s~p~t~~~Tav~WSpr------GKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 178 LSLRVKSTKQL---AQNV-TSFPVTNSQTAVLWSPR------GKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred cchhhhhhhhh---hhhh-cccCcccceeeEEeccc------cceeeEecCCCeEEEeec
Confidence 88888776642 1111 23456678888888754 578999999999887763
No 183
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=29.19 E-value=3.2e+02 Score=25.02 Aligned_cols=56 Identities=21% Similarity=0.218 Sum_probs=37.2
Q ss_pred ceeEEEeeeCCCCCccccEEEEEeC-----CCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCC
Q psy14552 160 EVLCMALSNAPSGEQMSRFLAVGLA-----DNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGAS 222 (290)
Q Consensus 160 ei~~l~i~~~~~~~~~~~~l~VGl~-----dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~ 222 (290)
-.+|+++.+... .+...|+||.. +..+.+|+ +....++..|..+|..++-..+...
T Consensus 16 ~ssC~~l~Dl~g--DGd~kLvvaD~g~~~~~~kLKVyk-----Gt~l~~E~~L~d~P~ai~sFy~d~~ 76 (257)
T PF14779_consen 16 FSSCMALADLQG--DGDYKLVVADLGTGDQNMKLKVYK-----GTSLISEITLPDLPSAIVSFYMDEH 76 (257)
T ss_pred cCceeEeeecCC--CCeEEEEEEecCCcCCCceEEEEc-----CCChhhcccccCCCeEEEEEeccCC
Confidence 346777776532 25677888873 44666666 2344556778999999998887543
No 184
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=28.81 E-value=4.9e+02 Score=24.32 Aligned_cols=108 Identities=16% Similarity=0.304 Sum_probs=59.7
Q ss_pred CCeEEEEEEcCCCCCceeeeee---e-ecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCC--Cce--eEeeE
Q psy14552 133 GGRLIYFEMHPETGILDECSET---I-QMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQ--DCL--KQKNL 204 (290)
Q Consensus 133 ~~~i~~l~l~~~~~~l~~~~~~---~-~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~--~~l--~~~~~ 204 (290)
...|.++.++++...|+.+... . +--+++--+++-...+ .+..|++|--.+|.+.-|+|-.. +.. .-++.
T Consensus 123 ~~~i~~y~Idp~~~~L~sitD~n~p~ss~~s~~YGl~lyrs~k--tgd~yvfV~~~qG~~~Qy~l~d~gnGkv~~k~vR~ 200 (364)
T COG4247 123 NDKIVFYKIDPNPQYLESITDSNAPYSSSSSSAYGLALYRSPK--TGDYYVFVNRRQGDIAQYKLIDQGNGKVGTKLVRQ 200 (364)
T ss_pred CCeEEEEEeCCCccceeeccCCCCccccCcccceeeEEEecCC--cCcEEEEEecCCCceeEEEEEecCCceEcceeeEe
Confidence 4467777777753333332110 0 0112222334433322 14788999888999999987432 112 22333
Q ss_pred EecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCC
Q psy14552 205 QGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSG 260 (290)
Q Consensus 205 ~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~ 260 (290)
..++++-+-+..- ...-+|+||-.|=.+..|.-++..|
T Consensus 201 fk~~tQTEG~VaD------------------dEtG~LYIaeEdvaiWK~~Aep~~G 238 (364)
T COG4247 201 FKIPTQTEGMVAD------------------DETGFLYIAEEDVAIWKYEAEPNRG 238 (364)
T ss_pred eecCCcccceeec------------------cccceEEEeeccceeeecccCCCCC
Confidence 3455554444333 2334599999999999998877555
No 185
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=28.24 E-value=5.3e+02 Score=24.58 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=57.2
Q ss_pred EEEEEe-CCeEEEEEEcCCCCCceeeeeeeecCccee-EEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeE
Q psy14552 127 IVIALQ-GGRLIYFEMHPETGILDECSETIQMESEVL-CMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNL 204 (290)
Q Consensus 127 l~Val~-~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~-~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~ 204 (290)
++|... ++.|.++..+. . +...++....++- .+.+.+ ...|++|...||.+.++.+.. .+.+++
T Consensus 8 ~~V~~~~~~~v~viD~~t--~---~~~~~i~~~~~~h~~~~~s~------Dgr~~yv~~rdg~vsviD~~~---~~~v~~ 73 (369)
T PF02239_consen 8 FYVVERGSGSVAVIDGAT--N---KVVARIPTGGAPHAGLKFSP------DGRYLYVANRDGTVSVIDLAT---GKVVAT 73 (369)
T ss_dssp EEEEEGGGTEEEEEETTT------SEEEEEE-STTEEEEEE-TT-------SSEEEEEETTSEEEEEETTS---SSEEEE
T ss_pred EEEEecCCCEEEEEECCC--C---eEEEEEcCCCCceeEEEecC------CCCEEEEEcCCCeEEEEECCc---ccEEEE
Confidence 445443 67787765443 2 2234455445542 223321 246888888899999888863 446666
Q ss_pred EecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEe-cCceEEEEEEeCCCCcc
Q psy14552 205 QGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGL-QNGALLRMVVDQTSGDL 262 (290)
Q Consensus 205 ~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl-~dG~l~~~~~d~~~~~l 262 (290)
...+.-|+++.+.. +++ |++++- .+|.+.- +|..+.++
T Consensus 74 i~~G~~~~~i~~s~-----------------DG~-~~~v~n~~~~~v~v--~D~~tle~ 112 (369)
T PF02239_consen 74 IKVGGNPRGIAVSP-----------------DGK-YVYVANYEPGTVSV--IDAETLEP 112 (369)
T ss_dssp EE-SSEEEEEEE-------------------TTT-EEEEEEEETTEEEE--EETTT--E
T ss_pred EecCCCcceEEEcC-----------------CCC-EEEEEecCCCceeE--eccccccc
Confidence 67788899988874 344 477664 4555543 47666554
No 186
>KOG0275|consensus
Probab=28.18 E-value=2.8e+02 Score=26.58 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=40.8
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCC-ceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCce
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGI-LDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCL 199 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~-l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l 199 (290)
+.+++|++-+..|.++++--+.. |. |.|+-.+.+.-.+. .+. + ...++.-+..||++.+|.....+|+
T Consensus 315 SrD~SqiLS~sfD~tvRiHGlKS--GK~LKEfrGHsSyvn~a---~ft--~----dG~~iisaSsDgtvkvW~~KtteC~ 383 (508)
T KOG0275|consen 315 SRDNSQILSASFDQTVRIHGLKS--GKCLKEFRGHSSYVNEA---TFT--D----DGHHIISASSDGTVKVWHGKTTECL 383 (508)
T ss_pred ccCcchhhcccccceEEEecccc--chhHHHhcCccccccce---EEc--C----CCCeEEEecCCccEEEecCcchhhh
Confidence 45567776666688888766654 32 33432222222222 222 1 2367778888999999998755554
Q ss_pred eE
Q psy14552 200 KQ 201 (290)
Q Consensus 200 ~~ 201 (290)
..
T Consensus 384 ~T 385 (508)
T KOG0275|consen 384 ST 385 (508)
T ss_pred hh
Confidence 43
No 187
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=27.55 E-value=1.5e+02 Score=18.13 Aligned_cols=29 Identities=28% Similarity=0.458 Sum_probs=20.8
Q ss_pred EEEEEecCceEEEEEEeCCCCcccccceEEecC
Q psy14552 240 YLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGS 272 (290)
Q Consensus 240 ~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~ 272 (290)
.+|++..||.++-+ |..+|++- +....|.
T Consensus 2 ~v~~~~~~g~l~Al--D~~TG~~~--W~~~~~~ 30 (38)
T PF01011_consen 2 RVYVGTPDGYLYAL--DAKTGKVL--WKFQTGP 30 (38)
T ss_dssp EEEEETTTSEEEEE--ETTTTSEE--EEEESSS
T ss_pred EEEEeCCCCEEEEE--ECCCCCEE--EeeeCCC
Confidence 37899999999755 78889864 3444443
No 188
>KOG0771|consensus
Probab=27.10 E-value=81 Score=30.64 Aligned_cols=39 Identities=23% Similarity=0.356 Sum_probs=28.8
Q ss_pred CcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEe
Q psy14552 158 ESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQK 202 (290)
Q Consensus 158 ~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~ 202 (290)
-..|+++++.+. -.|+++|+-||.|.+|....-+.+..+
T Consensus 281 ~~siSsl~VS~d------Gkf~AlGT~dGsVai~~~~~lq~~~~v 319 (398)
T KOG0771|consen 281 FKSISSLAVSDD------GKFLALGTMDGSVAIYDAKSLQRLQYV 319 (398)
T ss_pred cCcceeEEEcCC------CcEEEEeccCCcEEEEEeceeeeeEee
Confidence 458999988743 589999999999999987543333333
No 189
>KOG0276|consensus
Probab=26.93 E-value=2.5e+02 Score=29.27 Aligned_cols=69 Identities=7% Similarity=0.134 Sum_probs=48.0
Q ss_pred eeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeEeeEEecCCcc-eEEEEEEecCCCCCCCCCCCCCccCCce
Q psy14552 161 VLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQKNLQGLPDLA-ESLVMIEMGASDPTSSDEPAGPVTLGNL 239 (290)
Q Consensus 161 i~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~~~~~~L~~~p-~Sl~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (290)
+-|+.+.|. .++++.++.+|.|.+|+-+. -+.++...+...| |+-.++ ..+.
T Consensus 16 VKsVd~HPt------ePw~la~LynG~V~IWnyet---qtmVksfeV~~~PvRa~kfi------------------aRkn 68 (794)
T KOG0276|consen 16 VKSVDFHPT------EPWILAALYNGDVQIWNYET---QTMVKSFEVSEVPVRAAKFI------------------ARKN 68 (794)
T ss_pred eeeeecCCC------CceEEEeeecCeeEEEeccc---ceeeeeeeecccchhhheee------------------eccc
Confidence 556777643 68999999999999999873 3444445555555 333333 3456
Q ss_pred EEEEEecCceEEEEEEe
Q psy14552 240 YLYVGLQNGALLRMVVD 256 (290)
Q Consensus 240 ~L~iGl~dG~l~~~~~d 256 (290)
.+.+|-.|+.+--|..+
T Consensus 69 Wiv~GsDD~~IrVfnyn 85 (794)
T KOG0276|consen 69 WIVTGSDDMQIRVFNYN 85 (794)
T ss_pred eEEEecCCceEEEEecc
Confidence 79999999988777654
No 190
>KOG2444|consensus
Probab=26.86 E-value=1.4e+02 Score=27.04 Aligned_cols=65 Identities=18% Similarity=0.299 Sum_probs=40.1
Q ss_pred CEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 125 ~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
..|++|..++.|..+..... +...+.. .....+|.|+ |+.. ....+..+|.|||.++-++..+..
T Consensus 71 ~~~~vG~~dg~v~~~n~n~~-g~~~d~~--~s~~e~i~~~-Ip~~----~~~~~~c~~~~dg~ir~~n~~p~k 135 (238)
T KOG2444|consen 71 AKLMVGTSDGAVYVFNWNLE-GAHSDRV--CSGEESIDLG-IPNG----RDSSLGCVGAQDGRIRACNIKPNK 135 (238)
T ss_pred ceEEeecccceEEEecCCcc-chHHHhh--hcccccceec-cccc----cccceeEEeccCCceeeeccccCc
Confidence 45888988999988865532 2222211 1223344443 3322 245799999999999999987643
No 191
>KOG1645|consensus
Probab=26.54 E-value=2.7e+02 Score=27.41 Aligned_cols=61 Identities=8% Similarity=0.150 Sum_probs=41.0
Q ss_pred CCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 124 QRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 124 ~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
+.-+.++.-++.|-++++... .+......++.+-..++... ...++..|+.+|.|.+|.+-
T Consensus 206 ~GLl~~asl~nkiki~dlet~-----~~vssy~a~~~~wSC~wDld-----e~h~IYaGl~nG~VlvyD~R 266 (463)
T KOG1645|consen 206 EGLLGLASLGNKIKIMDLETS-----CVVSSYIAYNQIWSCCWDLD-----ERHVIYAGLQNGMVLVYDMR 266 (463)
T ss_pred cceeeeeccCceEEEEecccc-----eeeeheeccCCceeeeeccC-----CcceeEEeccCceEEEEEcc
Confidence 334666666888888887752 11123445565655555432 37899999999999999884
No 192
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=25.66 E-value=1.1e+02 Score=17.62 Aligned_cols=21 Identities=29% Similarity=0.664 Sum_probs=16.4
Q ss_pred EEEEEecCceEEEEEEeCCCCcc
Q psy14552 240 YLYVGLQNGALLRMVVDQTSGDL 262 (290)
Q Consensus 240 ~L~iGl~dG~l~~~~~d~~~~~l 262 (290)
.+|+|..+|.++.+. ..+|++
T Consensus 8 ~v~~~~~~g~l~a~d--~~~G~~ 28 (33)
T smart00564 8 TVYVGSTDGTLYALD--AKTGEI 28 (33)
T ss_pred EEEEEcCCCEEEEEE--cccCcE
Confidence 389999999998775 456665
No 193
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=25.44 E-value=6e+02 Score=24.29 Aligned_cols=203 Identities=12% Similarity=0.084 Sum_probs=105.3
Q ss_pred CccCCCCeEEEEeeCCCeEEEEecCCeEEEeecCcceeeeccCCCCCceEEEEeecCceEEEEeeCCeEEEEEecCCCce
Q psy14552 30 GFYGTTPTLCCSAMGDNSIVQVYPDGIRHIGAKNTTWKVSDKKESDKKKIVRCAVNQRQIVIALQGGRLIYFEMHPVSDK 109 (290)
Q Consensus 30 gf~~~~~Ti~~~~~~~~~ivQVt~~~v~l~~~~~~~~~~~~~~~~~~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~~~~ 109 (290)
.|..+.+++++.++.. ...|.++|..... .+.+++.|++..+..++-...+ +.+.+|...+..+++.+..
T Consensus 111 ~ls~dgk~l~V~n~~p-------~~~V~VvD~~~~k-vv~ei~vp~~~~vy~t~e~~~~--~~~~Dg~~~~v~~d~~g~~ 180 (352)
T TIGR02658 111 SLTPDNKTLLFYQFSP-------SPAVGVVDLEGKA-FVRMMDVPDCYHIFPTANDTFF--MHCRDGSLAKVGYGTKGNP 180 (352)
T ss_pred EECCCCCEEEEecCCC-------CCEEEEEECCCCc-EEEEEeCCCCcEEEEecCCccE--EEeecCceEEEEecCCCce
Confidence 3445555555555441 3334555544332 1344666777766665444444 4456888888766654432
Q ss_pred ecCCCceEEEE-----------Ee-CCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeee-----------cCcceeEEEe
Q psy14552 110 KESDKKKIVRC-----------AV-NQRQIVIALQGGRLIYFEMHPETGILDECSETIQ-----------MESEVLCMAL 166 (290)
Q Consensus 110 ~~~~~~~Ii~a-----------s~-~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~-----------l~~ei~~l~i 166 (290)
.. ....+... .. ++..+-++. .+.|..+.+..+ . . ...+.+. -|.-+--+++
T Consensus 181 ~~-~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~-eG~V~~id~~~~-~-~-~~~~~~~~~~~~~~~~~wrP~g~q~ia~ 255 (352)
T TIGR02658 181 KI-KPTEVFHPEDEYLINHPAYSNKSGRLVWPTY-TGKIFQIDLSSG-D-A-KFLPAIEAFTEAEKADGWRPGGWQQVAY 255 (352)
T ss_pred EE-eeeeeecCCccccccCCceEcCCCcEEEEec-CCeEEEEecCCC-c-c-eecceeeeccccccccccCCCcceeEEE
Confidence 11 11111111 11 344466664 477877765431 1 0 1111111 1111112444
Q ss_pred eeCCCCCccccEEEEEeC----------CCeEEEEEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccC
Q psy14552 167 SNAPSGEQMSRFLAVGLA----------DNTVRLISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTL 236 (290)
Q Consensus 167 ~~~~~~~~~~~~l~VGl~----------dg~v~i~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~ 236 (290)
.+. ...++|.+. .+.|.++... ..+.++...++.-|.++.+.. +
T Consensus 256 ~~d------g~~lyV~~~~~~~~thk~~~~~V~ViD~~---t~kvi~~i~vG~~~~~iavS~-----------------D 309 (352)
T TIGR02658 256 HRA------RDRIYLLADQRAKWTHKTASRFLFVVDAK---TGKRLRKIELGHEIDSINVSQ-----------------D 309 (352)
T ss_pred cCC------CCEEEEEecCCccccccCCCCEEEEEECC---CCeEEEEEeCCCceeeEEECC-----------------C
Confidence 322 356666431 1356665543 466666667888899998775 5
Q ss_pred CceEEEEEec-CceEEEEEEeCCCCcccccceE-EecCcceEE
Q psy14552 237 GNLYLYVGLQ-NGALLRMVVDQTSGDLSDNRMR-YLGSRPVKL 277 (290)
Q Consensus 237 ~~~~L~iGl~-dG~l~~~~~d~~~~~l~~~~~~-~lG~~pv~l 277 (290)
+++.||+--+ +|.+- .+|..++++. +.. .+|..|--+
T Consensus 310 gkp~lyvtn~~s~~Vs--ViD~~t~k~i--~~i~~vg~~P~~~ 348 (352)
T TIGR02658 310 AKPLLYALSTGDKTLY--IFDAETGKEL--SSVNQLGRGPQVI 348 (352)
T ss_pred CCeEEEEeCCCCCcEE--EEECcCCeEE--eeeccCCCCCeEE
Confidence 6656777764 56655 3477777653 334 788887655
No 194
>KOG0308|consensus
Probab=24.64 E-value=8.3e+02 Score=25.61 Aligned_cols=107 Identities=13% Similarity=0.147 Sum_probs=61.2
Q ss_pred EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCcee
Q psy14552 121 AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLK 200 (290)
Q Consensus 121 s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~ 200 (290)
..++.+++=|.+|++|++..|..+ .++.++..+.+. .=++... ....++..|..||.|.+-.|-.....+
T Consensus 222 ~dDGt~~ls~sSDgtIrlWdLgqQ-----rCl~T~~vH~e~-VWaL~~~----~sf~~vYsG~rd~~i~~Tdl~n~~~~t 291 (735)
T KOG0308|consen 222 NDDGTRLLSASSDGTIRLWDLGQQ-----RCLATYIVHKEG-VWALQSS----PSFTHVYSGGRDGNIYRTDLRNPAKST 291 (735)
T ss_pred cCCCCeEeecCCCceEEeeecccc-----ceeeeEEeccCc-eEEEeeC----CCcceEEecCCCCcEEecccCCchhhe
Confidence 355777888888999999998863 233445555555 3333221 136788888889988876663211111
Q ss_pred EeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeC
Q psy14552 201 QKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQ 257 (290)
Q Consensus 201 ~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~ 257 (290)
-+-+ ...|..=+..+ ...+. ..+++.|+.+.|+...+
T Consensus 292 lick---~daPv~~l~~~----------------~~~~~-~WvtTtds~I~rW~~~~ 328 (735)
T KOG0308|consen 292 LICK---EDAPVLKLHLH----------------EHDNS-VWVTTTDSSIKRWKLEP 328 (735)
T ss_pred Eeec---CCCchhhhhhc----------------cccCC-ceeeeccccceecCCcc
Confidence 1111 11232111111 11222 38999999999988644
No 195
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=24.49 E-value=8.2e+02 Score=25.51 Aligned_cols=117 Identities=15% Similarity=0.188 Sum_probs=59.7
Q ss_pred EEEEEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC--
Q psy14552 117 IVRCAVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLA-- 194 (290)
Q Consensus 117 Ii~as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~-- 194 (290)
.+.++..+.-++|-..+.++.+..... +.| |..+..+-...|--++....++ +...|+||.....+.+-.+.
T Consensus 34 li~gss~~k~a~V~~~~~~LtIWD~~~--~~l-E~~~~f~~~~~I~dLDWtst~d---~qsiLaVGf~~~v~l~~Q~R~d 107 (631)
T PF12234_consen 34 LISGSSIKKIAVVDSSRSELTIWDTRS--GVL-EYEESFSEDDPIRDLDWTSTPD---GQSILAVGFPHHVLLYTQLRYD 107 (631)
T ss_pred eEeecccCcEEEEECCCCEEEEEEcCC--cEE-EEeeeecCCCceeeceeeecCC---CCEEEEEEcCcEEEEEEccchh
Confidence 455544444455543455677776654 322 3323333356666666654443 47899999976655543331
Q ss_pred ---CCCceeEeeEEecCC-cceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEE
Q psy14552 195 ---PQDCLKQKNLQGLPD-LAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVV 255 (290)
Q Consensus 195 ---~~~~l~~~~~~~L~~-~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~ 255 (290)
.......+++..+.. .|..+.- ..=.+.-+|.||.+|...+.-+.
T Consensus 108 y~~~~p~w~~i~~i~i~~~T~h~Igd----------------s~Wl~~G~LvV~sGNqlfv~dk~ 156 (631)
T PF12234_consen 108 YTNKGPSWAPIRKIDISSHTPHPIGD----------------SIWLKDGTLVVGSGNQLFVFDKW 156 (631)
T ss_pred hhcCCcccceeEEEEeecCCCCCccc----------------eeEecCCeEEEEeCCEEEEECCC
Confidence 111223333222221 1111111 11123446999999999887654
No 196
>KOG0316|consensus
Probab=23.21 E-value=6e+02 Score=23.44 Aligned_cols=138 Identities=17% Similarity=0.263 Sum_probs=79.6
Q ss_pred CCceEEEE--EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEE
Q psy14552 113 DKKKIVRC--AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRL 190 (290)
Q Consensus 113 ~~~~Ii~a--s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i 190 (290)
.+.++.-+ +.++.+++-+-.|..+.++.+.. |...... ..-..+|-.+.+.+ .+..++-|..|.+++.
T Consensus 58 hG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~T--Gkv~Rr~--rgH~aqVNtV~fNe------esSVv~SgsfD~s~r~ 127 (307)
T KOG0316|consen 58 HGHEVLDAALSSDNSKFASCGGDKAVQVWDVNT--GKVDRRF--RGHLAQVNTVRFNE------ESSVVASGSFDSSVRL 127 (307)
T ss_pred CCceeeeccccccccccccCCCCceEEEEEccc--Ceeeeec--ccccceeeEEEecC------cceEEEeccccceeEE
Confidence 34555322 34445555443566777877654 4321111 12344566666642 3678888889999999
Q ss_pred EEeCCCCceeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceEEEEEEeCCCCcccccceEEe
Q psy14552 191 ISLAPQDCLKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYL 270 (290)
Q Consensus 191 ~~l~~~~~l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~l 270 (290)
|.--. ...+++ |.+...--+++-+.. ...-+..|--||.+-+|.+.. |.++ .-++
T Consensus 128 wDCRS-~s~ePi--Qildea~D~V~Si~v-----------------~~heIvaGS~DGtvRtydiR~--G~l~---sDy~ 182 (307)
T KOG0316|consen 128 WDCRS-RSFEPI--QILDEAKDGVSSIDV-----------------AEHEIVAGSVDGTVRTYDIRK--GTLS---SDYF 182 (307)
T ss_pred EEccc-CCCCcc--chhhhhcCceeEEEe-----------------cccEEEeeccCCcEEEEEeec--ceee---hhhc
Confidence 97532 234444 444444444444443 223489999999999998743 3332 3466
Q ss_pred cCcceEEEEEEeCCce
Q psy14552 271 GSRPVKLFKIRCQGNE 286 (290)
Q Consensus 271 G~~pv~l~~~~~~~~~ 286 (290)
| .||+-..+...|+-
T Consensus 183 g-~pit~vs~s~d~nc 197 (307)
T KOG0316|consen 183 G-HPITSVSFSKDGNC 197 (307)
T ss_pred C-CcceeEEecCCCCE
Confidence 6 57777666665553
No 197
>KOG4640|consensus
Probab=23.18 E-value=2.6e+02 Score=29.01 Aligned_cols=75 Identities=9% Similarity=0.150 Sum_probs=44.3
Q ss_pred EEEEeeCCeEEEEEecCCCceecC-CCceEEEE---EeCCCEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEE
Q psy14552 89 IVIALQGGRLIYFEMHPVSDKKES-DKKKIVRC---AVNQRQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCM 164 (290)
Q Consensus 89 v~ial~~g~i~~~~~~~~~~~~~~-~~~~Ii~a---s~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l 164 (290)
++++...|+++.-..+----|.-| .+....++ ..++.-++||+.||+|++...... +.+... ..+....|+++
T Consensus 35 iA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~-~~l~~~--~~s~e~~is~~ 111 (665)
T KOG4640|consen 35 IATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKG-GRLVSF--LFSVETDISKG 111 (665)
T ss_pred hheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCC-Cceecc--ccccccchhee
Confidence 445566777776666522246655 55555544 245677999999999999876641 233221 13334455555
Q ss_pred Ee
Q psy14552 165 AL 166 (290)
Q Consensus 165 ~i 166 (290)
.+
T Consensus 112 ~w 113 (665)
T KOG4640|consen 112 IW 113 (665)
T ss_pred ec
Confidence 44
No 198
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=22.96 E-value=4.4e+02 Score=21.80 Aligned_cols=68 Identities=15% Similarity=0.103 Sum_probs=44.2
Q ss_pred ccEEEEEeCCCeEEEEEeCCCCc-----eeEeeEEecCCcceEEEEEEecCCCCCCCCCCCCCccCCceEEEEEecCceE
Q psy14552 176 SRFLAVGLADNTVRLISLAPQDC-----LKQKNLQGLPDLAESLVMIEMGASDPTSSDEPAGPVTLGNLYLYVGLQNGAL 250 (290)
Q Consensus 176 ~~~l~VGl~dg~v~i~~l~~~~~-----l~~~~~~~L~~~p~Sl~~~~~~~~~~~~~~~~~~~~~~~~~~L~iGl~dG~l 250 (290)
.+-|++++.-|.|.+++...... -.+++...++..+++|+.-.+... ...-.|+||+.+..|
T Consensus 10 ~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~-------------~~~D~LliGt~t~ll 76 (136)
T PF14781_consen 10 HPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPD-------------DGRDCLLIGTQTSLL 76 (136)
T ss_pred ceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCC-------------CCcCEEEEeccceEE
Confidence 56788888888888886432211 122333445667788877776432 344569999999887
Q ss_pred EEEEEeC
Q psy14552 251 LRMVVDQ 257 (290)
Q Consensus 251 ~~~~~d~ 257 (290)
. |.++.
T Consensus 77 a-YDV~~ 82 (136)
T PF14781_consen 77 A-YDVEN 82 (136)
T ss_pred E-EEccc
Confidence 7 56644
No 199
>PRK04968 SecY interacting protein Syd; Provisional
Probab=22.23 E-value=1.2e+02 Score=26.31 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=27.3
Q ss_pred CCceEEEEEecCceEEEEEEeCCCCcccccceEEecCcceE
Q psy14552 236 LGNLYLYVGLQNGALLRMVVDQTSGDLSDNRMRYLGSRPVK 276 (290)
Q Consensus 236 ~~~~~L~iGl~dG~l~~~~~d~~~~~l~~~~~~~lG~~pv~ 276 (290)
+..+++|||+-|.-..-..+|..||++ .-..+|+.+=+
T Consensus 125 K~~PT~FIg~~~~e~~~isv~N~sGeV---~lE~~G~~~r~ 162 (181)
T PRK04968 125 KLPPTLFIATTDEEDEVISVCNLSGEV---ILETLGTRKRT 162 (181)
T ss_pred CCCCcEEEEEecCCCeEEEEECCCCeE---EEEeCCCCcce
Confidence 445679999997555556778889976 46778877643
No 200
>PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B.
Probab=21.88 E-value=1.8e+02 Score=16.99 Aligned_cols=24 Identities=13% Similarity=0.209 Sum_probs=16.6
Q ss_pred EEEEeecCceEEEEeeCCeEEEEE
Q psy14552 79 IVRCAVNQRQIVIALQGGRLIYFE 102 (290)
Q Consensus 79 Iv~as~n~~qv~ial~~g~i~~~~ 102 (290)
|++.++...+.+..+++|++...-
T Consensus 1 V~~ia~G~~ht~al~~~g~v~~wG 24 (30)
T PF13540_consen 1 VVQIACGGYHTCALTSDGEVYCWG 24 (30)
T ss_dssp EEEEEEESSEEEEEE-TTEEEEEE
T ss_pred CEEEEecCCEEEEEEcCCCEEEEc
Confidence 456677777788888888876554
No 201
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=21.23 E-value=5e+02 Score=21.85 Aligned_cols=107 Identities=12% Similarity=0.076 Sum_probs=56.0
Q ss_pred CceEEEEeecCceEEEEeeCCeEEEEEecCC-CceecCCCceEEE-EEeCCCEEEEEEeCCeEEEEEEcCCCCCceeeee
Q psy14552 76 KKKIVRCAVNQRQIVIALQGGRLIYFEMHPV-SDKKESDKKKIVR-CAVNQRQIVIALQGGRLIYFEMHPETGILDECSE 153 (290)
Q Consensus 76 ~~~Iv~as~n~~qv~ial~~g~i~~~~~~~~-~~~~~~~~~~Ii~-as~~~~~l~Val~~~~i~~l~l~~~~~~l~~~~~ 153 (290)
+..+..+...+.+++++-.++.|+.+..... ..|.......+.. -...+..++|+..++.++.+.... +.+ ..+
T Consensus 26 ~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~t--G~~--~W~ 101 (238)
T PF13360_consen 26 GGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSDGSLYALDAKT--GKV--LWS 101 (238)
T ss_dssp SSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEETTSEEEEEETTT--SCE--EEE
T ss_pred CCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecccccccccceeeeEecccCC--cce--eee
Confidence 3334344556777777777788877765332 2454422111211 134556777777778777766433 542 211
Q ss_pred eeecCcce------eEEEeeeCCCCCccccEEEEEeCCCeEEEEEeC
Q psy14552 154 TIQMESEV------LCMALSNAPSGEQMSRFLAVGLADNTVRLISLA 194 (290)
Q Consensus 154 ~~~l~~ei------~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~ 194 (290)
....+.+. ....+ ....++++..+|.++.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~l~~~d~~ 140 (238)
T PF13360_consen 102 IYLTSSPPAGVRSSSSPAV--------DGDRLYVGTSSGKLVALDPK 140 (238)
T ss_dssp EEE-SSCTCSTB--SEEEE--------ETTEEEEEETCSEEEEEETT
T ss_pred eccccccccccccccCceE--------ecCEEEEEeccCcEEEEecC
Confidence 11111111 11111 14578888889988877754
No 202
>KOG2079|consensus
Probab=20.74 E-value=6.1e+02 Score=28.24 Aligned_cols=68 Identities=22% Similarity=0.319 Sum_probs=41.9
Q ss_pred CEEEEEEeCCeEEEEEEcCCCCCceeeeeeeecCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCCceeE
Q psy14552 125 RQIVIALQGGRLIYFEMHPETGILDECSETIQMESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQDCLKQ 201 (290)
Q Consensus 125 ~~l~Val~~~~i~~l~l~~~~~~l~~~~~~~~l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~~l~~ 201 (290)
..++++++.+.+..+.+.. .|...........-++++++... ..+++.|+.+|.|.+|...-...++.
T Consensus 100 ~~ivi~Ts~ghvl~~d~~~---nL~~~~~ne~v~~~Vtsvafn~d------g~~l~~G~~~G~V~v~D~~~~k~l~~ 167 (1206)
T KOG2079|consen 100 VPIVIGTSHGHVLLSDMTG---NLGPLHQNERVQGPVTSVAFNQD------GSLLLAGLGDGHVTVWDMHRAKILKV 167 (1206)
T ss_pred eeEEEEcCchhhhhhhhhc---ccchhhcCCccCCcceeeEecCC------CceeccccCCCcEEEEEccCCcceee
Confidence 3467777666665554332 22211112234566888888643 57899999999999998764333433
No 203
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=20.35 E-value=1.3e+02 Score=18.48 Aligned_cols=15 Identities=33% Similarity=0.607 Sum_probs=12.1
Q ss_pred EEEEEecCceEEEEE
Q psy14552 240 YLYVGLQNGALLRMV 254 (290)
Q Consensus 240 ~L~iGl~dG~l~~~~ 254 (290)
.||+|..||.++-+.
T Consensus 23 ~vyv~~~dg~l~ald 37 (40)
T PF13570_consen 23 RVYVGTGDGNLYALD 37 (40)
T ss_dssp EEEEE-TTSEEEEEE
T ss_pred EEEEEcCCCEEEEEe
Confidence 499999999998774
No 204
>KOG1310|consensus
Probab=20.16 E-value=3e+02 Score=28.31 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=54.6
Q ss_pred cCceEEEEeeCCeEEEEEecCCCceecCCCceE---------------EEEEeCCCEEEEEEeCCeEEEEEEcCC-----
Q psy14552 85 NQRQIVIALQGGRLIYFEMHPVSDKKESDKKKI---------------VRCAVNQRQIVIALQGGRLIYFEMHPE----- 144 (290)
Q Consensus 85 n~~qv~ial~~g~i~~~~~~~~~~~~~~~~~~I---------------i~as~~~~~l~Val~~~~i~~l~l~~~----- 144 (290)
|+++|+-+..+..|..|.++...+=-+..+.++ +.|..+...+..|..||+|+-..+.+.
T Consensus 106 nnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p 185 (758)
T KOG1310|consen 106 NNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNP 185 (758)
T ss_pred CCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCc
Confidence 456666666667777777654222111222222 222233344666667999988766641
Q ss_pred CCCceeeeeeee-cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEE
Q psy14552 145 TGILDECSETIQ-MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLIS 192 (290)
Q Consensus 145 ~~~l~~~~~~~~-l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~ 192 (290)
++.....+.... ---|.-|+.|.+. +..||+||..|--.++|.
T Consensus 186 ~~~~~~~l~ny~~~lielk~ltisp~-----rp~~laVGgsdpfarLYD 229 (758)
T KOG1310|consen 186 DEDCPSILVNYNPQLIELKCLTISPS-----RPYYLAVGGSDPFARLYD 229 (758)
T ss_pred cccccHHHHHhchhhheeeeeeecCC-----CCceEEecCCCchhhhhh
Confidence 000000000000 1135667777654 478999999888766665
No 205
>KOG0303|consensus
Probab=20.01 E-value=8.5e+02 Score=24.02 Aligned_cols=111 Identities=13% Similarity=0.208 Sum_probs=54.3
Q ss_pred EEeecCceEEEEeeC---CeEEEEEecCCCceec----CCCceE---EEE-EeCCCE-EEEEEeCCeEEEEEEcCCCCCc
Q psy14552 81 RCAVNQRQIVIALQG---GRLIYFEMHPVSDKKE----SDKKKI---VRC-AVNQRQ-IVIALQGGRLIYFEMHPETGIL 148 (290)
Q Consensus 81 ~as~n~~qv~ial~~---g~i~~~~~~~~~~~~~----~~~~~I---i~a-s~~~~~-l~Val~~~~i~~l~l~~~~~~l 148 (290)
.|++|..++++.... |-.+-+-++..+.... ..+.+- -.+ +.-+.+ ++=|..|.+|-+.+++++ +..
T Consensus 39 fcavNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~-~l~ 117 (472)
T KOG0303|consen 39 FCAVNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPEN-GLT 117 (472)
T ss_pred ccccCCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCc-ccc
Confidence 578888888876543 3444344444333322 111110 111 111223 333334778888888873 321
Q ss_pred eeeeeee-e---cCcceeEEEeeeCCCCCccccEEEEEeCCCeEEEEEeCCCC
Q psy14552 149 DECSETI-Q---MESEVLCMALSNAPSGEQMSRFLAVGLADNTVRLISLAPQD 197 (290)
Q Consensus 149 ~~~~~~~-~---l~~ei~~l~i~~~~~~~~~~~~l~VGl~dg~v~i~~l~~~~ 197 (290)
....++. . -.+-+-.+...+. ..+.|+.+..|++|.+|+++...
T Consensus 118 ~~ltepvv~L~gH~rrVg~V~wHPt-----A~NVLlsag~Dn~v~iWnv~tge 165 (472)
T KOG0303|consen 118 RDLTEPVVELYGHQRRVGLVQWHPT-----APNVLLSAGSDNTVSIWNVGTGE 165 (472)
T ss_pred cCcccceEEEeecceeEEEEeeccc-----chhhHhhccCCceEEEEeccCCc
Confidence 1111111 0 1222333333332 24677777779999999997543
Done!