Psyllid ID: psy14555

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEAK
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccHHccHHHHHHHHHHccccccccccHHHHHHccccccccccccccccccccccccccccccccHHHcccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccHHHcHHHHHcccccHcHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccHHccHHHHHHHHHHHcccccHcccHHHHHccccHEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccEEEEcccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccEEEEEEEEccccc
Coil and Loop (DISEMBL)
MNVIFLTqysvnssyspqadiwSLGCTIVematgkppfielgspqaaLYRVgfhkmhpeipaelSDKAKQFILRCFekdpdkratagelledpfladltatrssssgllspevnlnskspeqdrfYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEAK
Flexible Loop (DISEMBL)
MNVIFLTqysvnssyspqADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATrssssgllspevnlnskspeqDRFYLCKKDSQRRITlsgvldqdrdHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEAK
Low Complexity Region (SEG)
MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEAK
Disordered region (IsUnstruct)
**VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE***********************************************FYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH***
Disordered Region (DISOPRED)
MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL***************************************************************************LEILMQGMRDNIAEQQKS****KIAQLKQELNFDSVAINQIHFAIYLFHE**
Disordered Region (DISEMBL)
MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEAK
Disordered Region (DISPRO)
*NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT********LLSPEVNLNSKSPEQDRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHE**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
Q6ZN16	1313	Mitogen-activated protein	yes	N/A	0.932	0.157	0.347	5e-38
A2AQW0	1331	Mitogen-activated protein	yes	N/A	0.936	0.156	0.332	1e-34
Q99683	1374	Mitogen-activated protein	no	N/A	0.360	0.058	0.682	6e-29
O35099	1380	Mitogen-activated protein	no	N/A	0.360	0.057	0.682	7e-29
Q9WTR2	1291	Mitogen-activated protein	no	N/A	0.918	0.158	0.315	8e-28
O95382	1288	Mitogen-activated protein	no	N/A	0.441	0.076	0.571	4e-27
O22042	651	Mitogen-activated protein	no	N/A	0.387	0.132	0.476	4e-18
Q9FZ36	651	Mitogen-activated protein	no	N/A	0.387	0.132	0.430	1e-16
O22040	666	Mitogen-activated protein	no	N/A	0.5	0.166	0.419	1e-16
O74304	1436	MAP kinase kinase kinase	yes	N/A	0.360	0.055	0.506	1e-15

>sp|Q6ZN16|M3K15_HUMAN Mitogen-activated protein kinase kinase kinase 15 OS=Homo sapiens GN=MAP3K15 PE=1 SV=2

 Score =  157 bits (397), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 138/273 (50%), Gaps = 66/273 (24%)

Query: 14   SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
             Y   ADIWSLGCTI+EMAT KPPF ELG PQAA+++VG  K+HPEIP  LS +A+ FIL
Sbjct: 827  GYGAPADIWSLGCTIIEMATSKPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFIL 886

Query: 74   RCFEKDPDKRATAGELLEDPFLADLT-----------------------------ATRSS 104
             CFE DP KRAT  ELL + FL  +                              AT SS
Sbjct: 887  SCFEPDPHKRATTAELLREGFLRQVNKGKKNRIAFKPSEGPRGVVLALPTQGEPMATSSS 946

Query: 105  SSGLLSPEVNLN---------------------------------SKSPEQDR---FYLC 128
              G +SP+ +                                   + SPE DR    +L 
Sbjct: 947  EHGSVSPDSDAQPDALFERTRAPRHHLGHLLSVPDESSALEDRGLASSPE-DRDQGLFLL 1005

Query: 129  KKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKS 188
            +KDS+RR  L  +L ++++ +     +C+ +  ++  LS  H++ ++  +RD I   +  
Sbjct: 1006 RKDSERRAILYKILWEEQNQVASNLQECVAQSSEELHLSVGHIKQIIGILRDFIRSPEHR 1065

Query: 189  CIETKIAQLKQELNFDSVAINQIHFAIYLFHEA 221
             + T I++LK +L+FDS +I+QIH  ++ F +A
Sbjct: 1066 VMATTISKLKVDLDFDSSSISQIHLVLFGFQDA 1098

May function in a signal transduction pathway that is activated by various cell stresses and leads to apoptosis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 5

>sp|A2AQW0|M3K15_MOUSE Mitogen-activated protein kinase kinase kinase 15 OS=Mus musculus GN=Map3k15 PE=3 SV=1

 Score =  145 bits (367), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 137/274 (50%), Gaps = 66/274 (24%)

Query: 14   SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
             Y   ADIWSLGCTI+EMAT +PPF ELG PQAA+++VG  K+HPEIP  LS +A+ FIL
Sbjct: 831  GYGAPADIWSLGCTIIEMATSRPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFIL 890

Query: 74   RCFEKDPDKRATA----------------------------------------GELL--- 90
             CFE DP KR TA                                        GEL+   
Sbjct: 891  SCFEPDPQKRVTAADLLQEGFLRQVNKGKKNRIAFKPSEGVRSGTGTLALPSSGELVGSS 950

Query: 91   --------------EDPFLADLTATRSSSSGLLS-----PEVNLNSKS-PEQDR---FYL 127
                           D F   +   +   S LLS     P ++  S + P ++R    +L
Sbjct: 951  SSEHGSISPDSDAQPDAFFEKVQVPKHQLSHLLSVPDESPALDDRSTALPPEERDPGLFL 1010

Query: 128  CKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQK 187
             +KDS+RR  L  +L ++++ +     +C+ +  ++ LLS +H++ ++  +RD I   + 
Sbjct: 1011 LRKDSERRAILYRILWEEQNQVASNLQECVVQSSEELLLSVSHIKQIIGILRDFIRSPEH 1070

Query: 188  SCIETKIAQLKQELNFDSVAINQIHFAIYLFHEA 221
              +   I++LK +L+FDS +INQIH  ++ F +A
Sbjct: 1071 RVMAATISKLKVDLDFDSSSINQIHLILFGFQDA 1104

May function in a signal transduction pathway that is activated by various cell stresses and leads to apoptosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q99683|M3K5_HUMAN Mitogen-activated protein kinase kinase kinase 5 OS=Homo sapiens GN=MAP3K5 PE=1 SV=1

 Score =  127 bits (319), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 65/82 (79%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL
Sbjct: 857 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 916

Query: 74  RCFEKDPDKRATAGELLEDPFL 95
           +CFE DPDKRA A +LL D FL
Sbjct: 917 KCFEPDPDKRACANDLLVDEFL 938

Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signaling for determination of cell fate such as differentiation and survival. Plays a crucial role in the apoptosis signal transduction pathway through mitochondria-dependent caspase activation. MAP3K5/ASK1 is required for the innate immune response, which is essential for host defense against a wide range of pathogens. Mediates signal transduction of various stressors like oxidative stress as well as by receptor-mediated inflammatory signals, such as the tumor necrosis factor (TNF) or lipopolysaccharide (LPS). Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K4/SEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs and c-jun N-terminal kinases (JNKs). Both p38 MAPK and JNKs control the transcription factors activator protein-1 (AP-1).

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O35099|M3K5_MOUSE Mitogen-activated protein kinase kinase kinase 5 OS=Mus musculus GN=Map3k5 PE=1 SV=3

 Score =  127 bits (318), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 65/82 (79%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL
Sbjct: 864 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 923

Query: 74  RCFEKDPDKRATAGELLEDPFL 95
           +CFE DPDKRA A +LL D FL
Sbjct: 924 KCFEPDPDKRACANDLLIDEFL 945

Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signaling for determination of cell fate such as differentiation and survival. Plays a crucial role in the apoptosis signal transduction pathway through mitochondria-dependent caspase activation. MAP3K5/ASK1 is required for the innate immune response, which is essential for host defense against a wide range of pathogens. Mediates signal transduction of various stressors like oxidative stress as well as by receptor-mediated inflammatory signals, such as the tumor necrosis factor (TNF) or lipopolysaccharide (LPS). Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K4/SEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs and c-jun N-terminal kinases (JNKs). Both p38 MAPK and JNKs control the transcription factors activator protein-1 (AP-1).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q9WTR2|M3K6_MOUSE Mitogen-activated protein kinase kinase kinase 6 OS=Mus musculus GN=Map3k6 PE=1 SV=4

 Score =  123 bits (309), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 59/263 (22%)

Query: 14   SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
             Y   ADIWSLGCT++EMATG+PPF ELGSPQAA+++VG +K+HP +P  LS +A+ F+L
Sbjct: 826  GYGKAADIWSLGCTVIEMATGRPPFHELGSPQAAMFQVGMYKVHPPVPGSLSAEAQAFLL 885

Query: 74   RCFEKDPDKRATAGELLEDPFLADLTATRS------------SSSGLLSPEVNLNSKS-- 119
            R FE DP  RA+A ELL DPFL     +RS            + SG  SP  +  ++S  
Sbjct: 886  RTFEPDPRLRASAQELLGDPFLQPGKRSRSPGSPRHTPRPSGAPSGPSSPSADSATQSQT 945

Query: 120  -----------PEQDRFYLCKKDS------------------------------QRRITL 138
                       P   +  L   D+                              +RR  L
Sbjct: 946  FPRPQAPSQHPPSPPKRCLSYGDTSQLRVPEEPAAEEPASPEESSGLSLLHQESKRRAML 1005

Query: 139  SGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLK 198
            + VL+Q+   + +  L+  Q    D  LSK H+E+L++ +   I    +  +  ++  L+
Sbjct: 1006 AAVLEQEVPTLAENLLEQEQ----DSRLSKIHVELLLRCLGAQIHTPNRRQLAQELRTLQ 1061

Query: 199  QELNFDSVAINQIHFAIYLFHEA 221
             +L   S+    +   ++ F +A
Sbjct: 1062 AQLRAQSLGPALLKGPLFAFPDA 1084

Component of a protein kinase signal transduction cascade. Activates the JNK, but not ERK or p38 kinase pathways.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O95382|M3K6_HUMAN Mitogen-activated protein kinase kinase kinase 6 OS=Homo sapiens GN=MAP3K6 PE=1 SV=3

 Score =  121 bits (303), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y   ADIWSLGCT++EMATG+PPF ELGSPQAA+++VG +K+HP +P+ LS +A+ F+L
Sbjct: 825 GYGKAADIWSLGCTVIEMATGRPPFHELGSPQAAMFQVGMYKVHPPMPSSLSAEAQAFLL 884

Query: 74  RCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSP 111
           R FE DP  RA+A  LL DPFL     +RS SS   +P
Sbjct: 885 RTFEPDPRLRASAQTLLGDPFLQPGKRSRSPSSPRHAP 922

Component of a protein kinase signal transduction cascade. Activates the JNK, but not ERK or p38 kinase pathways.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O22042|M3K3_ARATH Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1

 Score = 91.7 bits (226), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 59/86 (68%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
           + + +S  ADIWS+GCT++EMATGKPP+ E     AA+  +G  K HP IP +LS +AK 
Sbjct: 246 LQTGHSFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLHIGRTKAHPPIPEDLSPEAKD 305

Query: 71  FILRCFEKDPDKRATAGELLEDPFLA 96
           F+++C  K+P  R +A ELL+ PF+ 
Sbjct: 306 FLMKCLHKEPSLRLSATELLQHPFVT 331

Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q9FZ36|M3K2_ARATH Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 57/86 (66%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
           + + +S  ADIWS+GCT++EM TGK P+ +     AA++ +G  K HP IP  +S  A  
Sbjct: 246 LQTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTTKSHPPIPDNISSDAND 305

Query: 71  FILRCFEKDPDKRATAGELLEDPFLA 96
           F+L+C +++P+ R TA ELL+ PF+ 
Sbjct: 306 FLLKCLQQEPNLRPTASELLKHPFVT 331

Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O22040|ANP1_ARATH Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2

 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 1/112 (0%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
           + + +S  ADIWS+GCT++EM TGK P+ +     AA++ +G  K HP IP  LS  AK 
Sbjct: 247 LQTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDTLSSDAKD 306

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQ 122
           F+L+C ++ P+ R TA ELL+ PF+       S+S+ L S   NL++  P Q
Sbjct: 307 FLLKCLQEVPNLRPTASELLKHPFVMG-KHKESASTDLGSVLNNLSTPLPLQ 357

May be involved in an oxidative stress-mediated signaling cascade that phosphorylates downstream MAP kinases MPK3 and MPK6. May suppress auxin signaling that promotes cell cycle. Functionally redundant to ANP2 and ANP3 in the positive regulation of cytokinesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O74304|WIN1_SCHPO MAP kinase kinase kinase win1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=win1 PE=1 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 20   DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKAKQFILRCFE 77
            DIWSLGC IVEMATG PP+  L +  + +Y +  H   P IPA  +LS   + F+ RCF 
Sbjct: 1330 DIWSLGCVIVEMATGSPPWPRLDNHFSLMYHIAAHN-PPIIPADDQLSPLGQNFLKRCFV 1388

Query: 78   KDPDKRATAGELLEDPFLADLTA 100
             DP++RATA ELL DP++  L A
Sbjct: 1389 SDPNQRATAAELLMDPWVYPLRA 1411

Involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Activates the wis1 MAP kinase kinase by phosphorylation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
270001582	1255	hypothetical protein TcasGA2_TC000430 [T	0.923	0.163	0.458	4e-58
189234710	1322	PREDICTED: similar to Protein kinase at	0.923	0.155	0.464	2e-57
328719231	1346	PREDICTED: mitogen-activated protein kin	0.932	0.153	0.430	1e-52
427780971	1153	Putative protein kinase at 92b [Rhipicep	0.936	0.180	0.429	1e-49
198454803	1357	Pk92B, isoform A [Drosophila pseudoobscu	0.936	0.153	0.405	7e-47
390179293	1194	Pk92B, isoform B [Drosophila pseudoobscu	0.936	0.174	0.405	1e-46
390336813	1517	PREDICTED: mitogen-activated protein kin	0.914	0.133	0.384	3e-43
444707473	989	Mitogen-activated protein kinase kinase	0.936	0.210	0.402	2e-39
281352953	1152	hypothetical protein PANDA_001829 [Ailur	0.932	0.179	0.360	7e-37
47077281	748	unnamed protein product [Homo sapiens]	0.932	0.276	0.347	2e-36

>gi|270001582|gb|EEZ98029.1| hypothetical protein TcasGA2_TC000430 [Tribolium castaneum]

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 122/266 (45%), Positives = 162/266 (60%), Gaps = 61/266 (22%)

Query: 14   SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
             Y   ADIWSLGCT+VEMATGKPPFIELGSPQAA+++VG++K HP++P ELSD+AK FIL
Sbjct: 789  GYGAPADIWSLGCTVVEMATGKPPFIELGSPQAAVFKVGYYKDHPQVPEELSDRAKHFIL 848

Query: 74   RCFEKDPDKRATAGELLEDPFL-------------------------------------- 95
            RCFE DPDKRA+A +LLEDPF+                                      
Sbjct: 849  RCFEPDPDKRASAAQLLEDPFIGVDRKKSVRLNTEFNRSVSVPVDKMLPRLPGCSAPNQT 908

Query: 96   -----ADLTAT--------------RSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRI 136
                 +DL +T              R+S+  LLSPEV+    S E D FYL KKDSQRR 
Sbjct: 909  PTTPESDLASTPSLEIESCQDDTERRNSTGTLLSPEVD---ASTETDGFYLLKKDSQRRT 965

Query: 137  TLSGVLDQDRDHICQVWLKCIQ-RDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIA 195
            TL+ VL QD   +C+VW+  I+ + + + +L++ HL  LM G++D + EQ  + +E+ + 
Sbjct: 966  TLAKVLAQDGAKVCEVWMHKIRDKYMGETVLTQKHLARLMDGLKDYLTEQSLTVVESAVR 1025

Query: 196  QLKQELNFDSVAINQIHFAIYLFHEA 221
             LK+EL+FDS AINQ+ FAIYL+ E+
Sbjct: 1026 LLKEELDFDSTAINQLQFAIYLYQES 1051

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234710|ref|XP_972515.2| PREDICTED: similar to Protein kinase at 92B CG4720-PA [Tribolium castaneum]

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/265 (46%), Positives = 163/265 (61%), Gaps = 60/265 (22%)

Query: 14   SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
             Y   ADIWSLGCT+VEMATGKPPFIELGSPQAA+++VG++K HP++P ELSD+AK FIL
Sbjct: 788  GYGAPADIWSLGCTVVEMATGKPPFIELGSPQAAVFKVGYYKDHPQVPEELSDRAKHFIL 847

Query: 74   RCFEKDPDKRATAGELLEDPFL-------------------------------------- 95
            RCFE DPDKRA+A +LLEDPF+                                      
Sbjct: 848  RCFEPDPDKRASAAQLLEDPFIVDRKKSVRLNTEFNRSVSVPVDKMLPRLPGCSAPNQTP 907

Query: 96   ----ADLTATRS-------------SSSG-LLSPEVNLNSKSPEQDRFYLCKKDSQRRIT 137
                +DL +T S             +S+G LLSPEV+    S E D FYL KKDSQRR T
Sbjct: 908  TTPESDLASTPSLEIESCQDDTERRNSTGTLLSPEVD---ASTETDGFYLLKKDSQRRTT 964

Query: 138  LSGVLDQDRDHICQVWLKCIQ-RDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQ 196
            L+ VL QD   +C+VW+  I+ + + + +L++ HL  LM G++D + EQ  + +E+ +  
Sbjct: 965  LAKVLAQDGAKVCEVWMHKIRDKYMGETVLTQKHLARLMDGLKDYLTEQSLTVVESAVRL 1024

Query: 197  LKQELNFDSVAINQIHFAIYLFHEA 221
            LK+EL+FDS AINQ+ FAIYL+ E+
Sbjct: 1025 LKEELDFDSTAINQLQFAIYLYQES 1049

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328719231|ref|XP_001945657.2| PREDICTED: mitogen-activated protein kinase kinase kinase 15-like isoform 1 [Acyrthosiphon pisum]

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/267 (43%), Positives = 151/267 (56%), Gaps = 60/267 (22%)

Query: 15   YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
            Y   ADIWSLGCT+VEMATG+PPF ELGS  AA+++VGF+K HPEIP ELSD+A  FILR
Sbjct: 802  YGAPADIWSLGCTVVEMATGEPPFTELGSAVAAVFKVGFYKTHPEIPVELSDRASNFILR 861

Query: 75   CFEKDPDKRATAGELLEDPFL-----------ADLTATRSSS------------------ 105
            CF  DPDKRATA +LLED F+           A L   RS S                  
Sbjct: 862  CFTVDPDKRATATDLLEDLFMNEKKKTSKALIAPLEFNRSVSVPVEKGVKANPISSNQEN 921

Query: 106  ---------------------------SGLLSPEVNLNSKS----PEQDRFYLCKKDSQR 134
                                         L SPE+++ +       E D FY  KKDSQR
Sbjct: 922  INKNPSKQRVLKEDSLDGQRYNRRQSSGALASPEIDMGTAGSTAEAEHDGFYRLKKDSQR 981

Query: 135  RITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKI 194
            R TL+ VL QD+  + +VWL+ I+R+     L+  HLE+LM+G+RD I +Q +  +E  I
Sbjct: 982  RTTLARVLAQDQATLGKVWLQFIRREFGQPKLTGEHLEVLMKGLRDYITDQNRDVVERTI 1041

Query: 195  AQLKQELNFDSVAINQIHFAIYLFHEA 221
              LK++LNFD+VA++Q+H ++ LF +A
Sbjct: 1042 YSLKEQLNFDAVAVHQLHISLCLFKDA 1068

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427780971|gb|JAA55937.1| Putative protein kinase at 92b [Rhipicephalus pulchellus]

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 153/268 (57%), Gaps = 60/268 (22%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y P ADIWSLGCT++EMATGK PFIELG+PQAA+++VG  K+HPEIP+ LS+KA++FI 
Sbjct: 667 GYGPPADIWSLGCTVIEMATGKTPFIELGTPQAAMFKVGCFKIHPEIPSSLSEKAQKFIK 726

Query: 74  RCFEKDPDKRATAGELLEDPF--------------------------------------- 94
           RCFE DP KRATA ELLEDPF                                       
Sbjct: 727 RCFEPDPAKRATAAELLEDPFMLEKKTRPAAPDFSRSISVPADRVHKMDKPERMSRFAST 786

Query: 95  --------LADLTAT-------RSSS-----SGLLSPEVNLNSKSPEQDRFYLCKKDSQR 134
                   L+  TAT       RS S     SGLLSP V+ +S   E   FYL KKDSQR
Sbjct: 787 GEDGTSFLLSSATATSPTDAIPRSPSTFSFSSGLLSPPVDGSSVDQESGGFYLLKKDSQR 846

Query: 135 RITLSGVLDQDRDHICQVWLKCIQRDV-DDCLLSKAHLEILMQGMRDNIAEQQKSCIETK 193
           R T+  VL+++   IC +W+  +Q+D  +D +++K  L  L+ G ++ I EQ K+ ++  
Sbjct: 847 RQTILRVLEENGGTICDIWMNKLQQDSGNDLVITKEQLVSLIDGFKNYIPEQNKTGLQHI 906

Query: 194 IAQLKQELNFDSVAINQIHFAIYLFHEA 221
           I +LKQE++ D  A +Q+  A+YLF  A
Sbjct: 907 IGKLKQEVSHDQKAFHQLTVALYLFQSA 934

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198454803|ref|XP_001359730.2| Pk92B, isoform A [Drosophila pseudoobscura pseudoobscura] gi|198132960|gb|EAL28882.2| Pk92B, isoform A [Drosophila pseudoobscura pseudoobscura]

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/279 (40%), Positives = 143/279 (51%), Gaps = 71/279 (25%)

Query: 14   SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
             Y P ADIWS GCT VEMATGKPPFIELG  QAA+++VG+HK HP IP ELS  AK FIL
Sbjct: 758  GYGPAADIWSFGCTNVEMATGKPPFIELGCAQAAMFKVGYHKKHPNIPVELSTNAKNFIL 817

Query: 74   RCFEKDPDKRATAGELLEDPFLAD------------------------------------ 97
            RCF      R +A +LLEDPFLAD                                    
Sbjct: 818  RCFAISVLDRPSASQLLEDPFLADKPRKPRPGLPINTDFGRSISVPADRLVNKTTAPLTY 877

Query: 98   -----------LTATRSSS---------------SGLL-SPEVNLN--------SKSPEQ 122
                       L  T SSS               SG L SPE+  +        S++ E 
Sbjct: 878  NTTHNTPTTPELDVTHSSSVDIDELPSLLERRNSSGFLLSPEIEPSTPSLRTSISETSET 937

Query: 123  DRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNI 182
            D FY  KKDSQRR TL+ VL  D   +C +WLK I  D +   + K+ LE+L++G+RD I
Sbjct: 938  DGFYRLKKDSQRRTTLAKVLALDESKMCDIWLKKIDADQNSIAIRKSDLEVLIRGLRDYI 997

Query: 183  AEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEA 221
              + +  +E  I +LKQ LN D+VA++ +H A+Y F + 
Sbjct: 998  INENEKHLEATINELKQRLNNDAVALDHLHLALYSFQDV 1036

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390179293|ref|XP_003736857.1| Pk92B, isoform B [Drosophila pseudoobscura pseudoobscura] gi|388859790|gb|EIM52930.1| Pk92B, isoform B [Drosophila pseudoobscura pseudoobscura]

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/279 (40%), Positives = 143/279 (51%), Gaps = 71/279 (25%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y P ADIWS GCT VEMATGKPPFIELG  QAA+++VG+HK HP IP ELS  AK FIL
Sbjct: 595 GYGPAADIWSFGCTNVEMATGKPPFIELGCAQAAMFKVGYHKKHPNIPVELSTNAKNFIL 654

Query: 74  RCFEKDPDKRATAGELLEDPFLAD------------------------------------ 97
           RCF      R +A +LLEDPFLAD                                    
Sbjct: 655 RCFAISVLDRPSASQLLEDPFLADKPRKPRPGLPINTDFGRSISVPADRLVNKTTAPLTY 714

Query: 98  -----------LTATRSSS---------------SGLL-SPEVNLN--------SKSPEQ 122
                      L  T SSS               SG L SPE+  +        S++ E 
Sbjct: 715 NTTHNTPTTPELDVTHSSSVDIDELPSLLERRNSSGFLLSPEIEPSTPSLRTSISETSET 774

Query: 123 DRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNI 182
           D FY  KKDSQRR TL+ VL  D   +C +WLK I  D +   + K+ LE+L++G+RD I
Sbjct: 775 DGFYRLKKDSQRRTTLAKVLALDESKMCDIWLKKIDADQNSIAIRKSDLEVLIRGLRDYI 834

Query: 183 AEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEA 221
             + +  +E  I +LKQ LN D+VA++ +H A+Y F + 
Sbjct: 835 INENEKHLEATINELKQRLNNDAVALDHLHLALYSFQDV 873

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390336813|ref|XP_797118.3| PREDICTED: mitogen-activated protein kinase kinase kinase 15 [Strongylocentrotus purpuratus]

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/263 (38%), Positives = 144/263 (54%), Gaps = 60/263 (22%)

Query: 19   ADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK 78
            ADIWSLGCTIVEMATGKPPFIELGSPQAA+++VGF+K HPEIP  LS+ AK+FILRCFE 
Sbjct: 999  ADIWSLGCTIVEMATGKPPFIELGSPQAAMFKVGFYKDHPEIPESLSNAAKEFILRCFEP 1058

Query: 79   DPDKRATAGELLEDPFL------------ADLTATRSSSSGLLSP--------------- 111
            DP+KRATA +LL+DPFL            AD    RS S  +++P               
Sbjct: 1059 DPEKRATAHDLLQDPFLIKGRKMSKKTSAADYRTDRSISMPMVNPGSRPESPLTLASTLS 1118

Query: 112  -------------------------------EVNLNSKSPEQDRFYLCKKDSQRRITLSG 140
                                           E  +   + EQ  FY+ +KDS+RR TL  
Sbjct: 1119 NFSEADAASSIRLDKRRSLELLSPGSSEDGLETPVTPDNREQGGFYMLRKDSERRQTLLT 1178

Query: 141  VLDQDRDHICQVWLKCIQRDVDD--CLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLK 198
            +++ D D I   W+K +Q   D     ++  HL  L  G+   I ++++  +   + +L+
Sbjct: 1179 IIEGDGDKIVNEWMKKLQLSGDRPPTKITTDHLMTLNHGIALFIKQRERRMLVGTLDKLR 1238

Query: 199  QELNFDSVAINQIHFAIYLFHEA 221
             +L++D  A+++IH A+Y+F ++
Sbjct: 1239 DDLDYDPTALSEIHTALYVFQDS 1261

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|444707473|gb|ELW48748.1| Mitogen-activated protein kinase kinase kinase 15 [Tupaia chinensis]

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/216 (40%), Positives = 133/216 (61%), Gaps = 8/216 (3%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y   ADIWSLGCTI+EMAT +PPF ELG PQAA+++VG  K+HPEIP  LS +A+ FIL
Sbjct: 642 GYGAPADIWSLGCTIIEMATSRPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFIL 701

Query: 74  RCFEKDPDKRATAGELLEDPFLADLTATRSSS-----SGLLSPEVNLNSKSPEQDR---F 125
            CFE DP+KR TA +LL++ FL  +   + +      S   S   + ++ S  +DR    
Sbjct: 702 SCFEPDPNKRVTAADLLKESFLRQVNKGKKNRIAFKPSDESSASEDRSAASSPEDRDPGL 761

Query: 126 YLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQ 185
           +L +KDS+RR  L  +L +++D +     +C+ +      LS  H++ ++  +RD I   
Sbjct: 762 FLLRKDSERRAILHKILWEEQDQVAYNLQECVAQARKQLHLSIGHIKQIIGILRDFIHSP 821

Query: 186 QKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEA 221
           +   + + I++LK +L+FDS +INQIH  ++ F +A
Sbjct: 822 EHRVMASTISKLKVDLDFDSSSINQIHLVLFGFQDA 857

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|281352953|gb|EFB28537.1| hypothetical protein PANDA_001829 [Ailuropoda melanoleuca]

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 138/266 (51%), Gaps = 59/266 (22%)

Query: 14   SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
             Y   ADIWSLGCTI+EMAT +PPF ELG PQAA+++VG  K+HPEIP  LS  A+ FIL
Sbjct: 740  GYGAPADIWSLGCTIIEMATSRPPFHELGEPQAAMFKVGMFKIHPEIPEGLSMDARAFIL 799

Query: 74   RCFEKDPDKRATAGELLEDPFLADLT-------------ATRSSS--------------- 105
             CFE DP KRATAGELL + FL  +              +TR ++               
Sbjct: 800  SCFEPDPHKRATAGELLREGFLRQVNKGKKNRIAFKPAESTRGTALALPTSGEPMGSSSS 859

Query: 106  ---------------------------SGLLSPEVNLNSKSPEQDR---FYLCKKDSQRR 135
                                       S LLS      + SPE DR    +L +KDS+RR
Sbjct: 860  EHGSVSPDSDAQLDTFFEKARAPKHRLSHLLSVPDESAASSPE-DRDPGLFLLRKDSERR 918

Query: 136  ITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIA 195
              L  +L ++++ +     +C+ +  +D  LS  H++ ++  +RD I   +   + + I+
Sbjct: 919  AILYKILWEEQNQVASNLQECVAQSSEDLHLSVGHIKQIIGILRDFIRSPEHRVMASTIS 978

Query: 196  QLKQELNFDSVAINQIHFAIYLFHEA 221
            +LK +L+FDS +INQIH  ++ F +A
Sbjct: 979  KLKVDLDFDSSSINQIHLVLFGFQDA 1004

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|47077281|dbj|BAD18559.1| unnamed protein product [Homo sapiens]

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 138/273 (50%), Gaps = 66/273 (24%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y   ADIWSLGCTI+EMAT KPPF ELG PQAA+++VG  K+HPEIP  LS +A+ FIL
Sbjct: 262 GYGAPADIWSLGCTIIEMATSKPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFIL 321

Query: 74  RCFEKDPDKRATAGELLEDPFLADLT-----------------------------ATRSS 104
            CFE DP KRAT  ELL + FL  +                              AT SS
Sbjct: 322 SCFEPDPHKRATTAELLREGFLRQVNKGKKNRIAFKPSEGPRGVVLALPTQGEPMATSSS 381

Query: 105 SSGLLSPEVNLN---------------------------------SKSPEQDR---FYLC 128
             G +SP+ +                                   + SPE DR    +L 
Sbjct: 382 EHGSVSPDSDAQPDALFERTRAPRHHLGHLLSVPDESSALEDRGLASSPE-DRDQGLFLL 440

Query: 129 KKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKS 188
           +KDS+RR  L  +L ++++ +     +C+ +  ++  LS  H++ ++  +RD I   +  
Sbjct: 441 RKDSERRAILYKILWEEQNQVASNLQECVAQSSEELHLSVGHIKQIIGILRDFIRSPEHR 500

Query: 189 CIETKIAQLKQELNFDSVAINQIHFAIYLFHEA 221
            + T I++LK +L+FDS +I+QIH  ++ F +A
Sbjct: 501 VMATTISKLKVDLDFDSSSISQIHLVLFGFQDA 533

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
FB|FBgn0014006	1367	Pk92B "Protein kinase at 92B"	0.373	0.060	0.674	8.9e-48
UNIPROTKB|A6NIA0	621	MAP3K5 "cDNA FLJ50139, highly	0.364	0.130	0.691	1e-40
ZFIN|ZDB-GENE-030827-3	1364	map3k5 "mitogen-activated prot	0.405	0.065	0.637	1.2e-40
UNIPROTKB|F1NKW3	1207	MAP3K15 "Uncharacterized prote	0.477	0.087	0.556	1.7e-40
UNIPROTKB|I3LMU4	621	I3LMU4 "Uncharacterized protei	0.364	0.130	0.679	6e-40
UNIPROTKB|F1NYS9	998	F1NYS9 "Uncharacterized protei	0.441	0.098	0.642	1.2e-39
UNIPROTKB|Q99683	1374	MAP3K5 "Mitogen-activated prot	0.364	0.058	0.691	2.2e-39
MGI|MGI:1346876	1380	Map3k5 "mitogen-activated prot	0.364	0.058	0.691	2.8e-39
ZFIN|ZDB-GENE-091204-246	1331	si:dkey-108d10.2 "si:dkey-108d	0.364	0.060	0.703	4.1e-39
UNIPROTKB|F1PA02	1366	MAP3K5 "Uncharacterized protei	0.364	0.059	0.691	5.7e-39

FB|FBgn0014006 Pk92B "Protein kinase at 92B" [Drosophila melanogaster (taxid:7227)]

 Score = 293 (108.2 bits), Expect = 8.9e-48, Sum P(2) = 8.9e-48
 Identities = 56/83 (67%), Positives = 62/83 (74%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y P ADIWS GCT VEMATGKPPFIELGS  AA+++VGF+K HP IP ELS  AK FILR
Sbjct:   767 YGPAADIWSFGCTNVEMATGKPPFIELGSAHAAMFKVGFYKKHPNIPEELSANAKNFILR 826

Query:    75 CFEKDPDKRATAGELLEDPFLAD 97
             CF      R +A +LLEDPFL D
Sbjct:   827 CFAISVMDRPSASQLLEDPFLQD 849

GO:0006468 "protein phosphorylation" evidence=IEA;ISS;NAS

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS

GO:0012501 "programmed cell death" evidence=NAS

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0032874 "positive regulation of stress-activated MAPK cascade" evidence=IDA;IMP

GO:0048082 "regulation of adult chitin-containing cuticle pigmentation" evidence=IMP

GO:0046330 "positive regulation of JNK cascade" evidence=IDA

UNIPROTKB|A6NIA0 MAP3K5 "cDNA FLJ50139, highly similar to Mitogen-activated protein kinase kinase kinase 5(EC 2.7.11.25)" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
 Identities = 56/81 (69%), Positives = 65/81 (80%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL+
Sbjct:   105 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 164

Query:    75 CFEKDPDKRATAGELLEDPFL 95
             CFE DPDKRA A +LL D FL
Sbjct:   165 CFEPDPDKRACANDLLVDEFL 185

GO:0005524 "ATP binding" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IEA

GO:0004709 "MAP kinase kinase kinase activity" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

ZFIN|ZDB-GENE-030827-3 map3k5 "mitogen-activated protein kinase kinase kinase 5" [Danio rerio (taxid:7955)]

 Score = 309 (113.8 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
 Identities = 58/91 (63%), Positives = 69/91 (75%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FILR
Sbjct:   847 YGKPADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKIHPEIPDSMSSEAKAFILR 906

Query:    75 CFEKDPDKRATAGELLEDPFLADLTATRSSS 105
             CFE DPD RATA +LL   FL  +T+ +  S
Sbjct:   907 CFEPDPDSRATANDLLTHEFLT-VTSRKKRS 936

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

UNIPROTKB|F1NKW3 MAP3K15 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 308 (113.5 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 59/106 (55%), Positives = 71/106 (66%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCT++EMATGKPPF ELG PQAA+++VG  K+HPEIP  LS +AK FIL 
Sbjct:   709 YGAPADIWSLGCTMIEMATGKPPFHELGEPQAAMFKVGMFKIHPEIPESLSAEAKAFILL 768

Query:    75 CFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSP 120
             CFE DP KRA A +LL D FL  +   + S       + N N+  P
Sbjct:   769 CFEPDPFKRAAASDLLRDSFLKQVNKGKKSRIAFKPSDYNRNASLP 814

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|I3LMU4 I3LMU4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 302 (111.4 bits), Expect = 6.0e-40, Sum P(2) = 6.0e-40
 Identities = 55/81 (67%), Positives = 64/81 (79%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL+
Sbjct:   105 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 164

Query:    75 CFEKDPDKRATAGELLEDPFL 95
             CFE DPDKR  A +LL D FL
Sbjct:   165 CFEPDPDKRDCANDLLMDEFL 185

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1NYS9 F1NYS9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 321 (118.1 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
 Identities = 63/98 (64%), Positives = 71/98 (72%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FILR
Sbjct:   713 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKIHPEIPESMSAEAKSFILR 772

Query:    75 CFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
             CFE DPDKRA A ELL D FL   +  R S S L   E
Sbjct:   773 CFEPDPDKRAFAHELLVDEFLKVSSKKRKSPSKLSGKE 810

GO:0005524 "ATP binding" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0004709 "MAP kinase kinase kinase activity" evidence=IEA

GO:0007254 "JNK cascade" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=IEA

GO:0008656 "cysteine-type endopeptidase activator activity involved in apoptotic process" evidence=IEA

GO:0010421 "hydrogen peroxide-mediated programmed cell death" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0019903 "protein phosphatase binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

UNIPROTKB|Q99683 MAP3K5 "Mitogen-activated protein kinase kinase kinase 5" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
 Identities = 56/81 (69%), Positives = 65/81 (80%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL+
Sbjct:   858 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 917

Query:    75 CFEKDPDKRATAGELLEDPFL 95
             CFE DPDKRA A +LL D FL
Sbjct:   918 CFEPDPDKRACANDLLVDEFL 938

GO:0019048 "virus-host interaction" evidence=IEA

GO:0045087 "innate immune response" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0004709 "MAP kinase kinase kinase activity" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0008656 "cysteine-type endopeptidase activator activity involved in apoptotic process" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0000165 "MAPK cascade" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0043065 "positive regulation of apoptotic process" evidence=IDA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=IDA

GO:0007254 "JNK cascade" evidence=IDA

GO:0097190 "apoptotic signaling pathway" evidence=TAS

GO:0007257 "activation of JUN kinase activity" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

GO:0019903 "protein phosphatase binding" evidence=IPI

GO:0043280 "positive regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IDA

GO:0070301 "cellular response to hydrogen peroxide" evidence=IDA

GO:0000186 "activation of MAPKK activity" evidence=IDA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IDA

MGI|MGI:1346876 Map3k5 "mitogen-activated protein kinase kinase kinase 5" [Mus musculus (taxid:10090)]

 Score = 307 (113.1 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
 Identities = 56/81 (69%), Positives = 65/81 (80%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL+
Sbjct:   865 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 924

Query:    75 CFEKDPDKRATAGELLEDPFL 95
             CFE DPDKRA A +LL D FL
Sbjct:   925 CFEPDPDKRACANDLLIDEFL 945

GO:0000165 "MAPK cascade" evidence=ISO

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000186 "activation of MAPKK activity" evidence=ISO

GO:0000187 "activation of MAPK activity" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0006950 "response to stress" evidence=IEA

GO:0007254 "JNK cascade" evidence=ISO

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=ISO

GO:0008656 "cysteine-type endopeptidase activator activity involved in apoptotic process" evidence=ISO

GO:0010941 "regulation of cell death" evidence=IGI

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IPI

GO:0019903 "protein phosphatase binding" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=ISO;IDA

GO:0043280 "positive regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0045087 "innate immune response" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070301 "cellular response to hydrogen peroxide" evidence=ISO

ZFIN|ZDB-GENE-091204-246 si:dkey-108d10.2 "si:dkey-108d10.2" [Danio rerio (taxid:7955)]

 Score = 310 (114.2 bits), Expect = 4.1e-39, Sum P(2) = 4.1e-39
 Identities = 57/81 (70%), Positives = 66/81 (81%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  LS +AK FIL 
Sbjct:   810 YGAPADIWSLGCTIIEMATGKPPFHELGEPQAAMFKVGMFKIHPEIPESLSSEAKSFILS 869

Query:    75 CFEKDPDKRATAGELLEDPFL 95
              FE DP+KRA AG+LL+DPFL
Sbjct:   870 SFEPDPNKRAMAGDLLKDPFL 890

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

UNIPROTKB|F1PA02 MAP3K5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 307 (113.1 bits), Expect = 5.7e-39, Sum P(2) = 5.7e-39
 Identities = 56/81 (69%), Positives = 65/81 (80%)

Query:    15 YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
             Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL+
Sbjct:   850 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 909

Query:    75 CFEKDPDKRATAGELLEDPFL 95
             CFE DPDKRA A +LL D FL
Sbjct:   910 CFEPDPDKRACANDLLIDEFL 930

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	222
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-46
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-39
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-31
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-27
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-25
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-24
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-24
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-21
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-21
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-18
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-18
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-18
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-18
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-18
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-17
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-16
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-15
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-15
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-15
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-15
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	9e-15
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-15
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-14
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-14
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-14
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-14
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	6e-14
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-13
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-13
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-13
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-13
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-12
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-12
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-12
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	5e-12
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	9e-12
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-11
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-11
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-11
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-11
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-11
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-11
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-11
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-11
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	8e-11
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-10
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-10
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-10
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-10
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-10
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	8e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	8e-10
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-09
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-09
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-09
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	7e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	7e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-09
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	8e-09
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-08
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-08
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	5e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-08
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	8e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-07
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	4e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-07
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	6e-07
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-07
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	8e-07
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-07
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	9e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-06
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-06
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	6e-06
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	6e-06
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	6e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	7e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	8e-06
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	8e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	9e-06
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-05
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-05
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	3e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-05
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-05
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	6e-05
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	7e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	8e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	9e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	9e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-04
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-04
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	4e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	5e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	6e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	6e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	6e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	7e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	8e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	9e-04
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	0.001
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.001
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.001
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.001
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.002
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.002
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.002
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	0.002
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.002
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	0.002
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	0.002
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.002
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.002
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.002
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.002
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	0.003
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.003
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	0.003
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.003
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	0.004
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	0.004

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score =  154 bits (392), Expect = 1e-46
 Identities = 61/81 (75%), Positives = 69/81 (85%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y   ADIWSLGCTIVEMATGKPPFIELG PQAA+++VG  K+HPEIP  LS +AK FILR
Sbjct: 188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILR 247

Query: 75  CFEKDPDKRATAGELLEDPFL 95
           CFE DPDKRA+A +LL+DPFL
Sbjct: 248 CFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  134 bits (340), Expect = 5e-39
 Identities = 49/81 (60%), Positives = 61/81 (75%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y   ADIWSLGCT++EMATGKPP+ ELG+P AALY++G     PEIP  LS++AK F+ +
Sbjct: 180 YGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRK 239

Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C  +DP KR TA ELL+ PFL
Sbjct: 240 CLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  115 bits (290), Expect = 1e-31
 Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 1/82 (1%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y   ADIWSLGCT++EMATGKPP+ +L    AA++++G  K  P IP  LSD+AK FIL
Sbjct: 178 GYGLAADIWSLGCTVLEMATGKPPWSQL-EGVAAVFKIGRSKELPPIPDHLSDEAKDFIL 236

Query: 74  RCFEKDPDKRATAGELLEDPFL 95
           +C ++DP  R TA ELLE PF+
Sbjct: 237 KCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  103 bits (259), Expect = 6e-27
 Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 3/79 (3%)

Query: 19  ADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILRCF 76
           ADIWSLGC ++EMATGK P+ EL +    ++ VG     P IP   +LS + K F+ RC 
Sbjct: 187 ADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAG-HKPPIPDSLQLSPEGKDFLDRCL 245

Query: 77  EKDPDKRATAGELLEDPFL 95
           E DP KR TA ELL+ PF+
Sbjct: 246 ESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 98.8 bits (247), Expect = 3e-25
 Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 4/82 (4%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQFI 72
           Y  +ADIWSLG T +E+A GKPP+ EL  P  AL+++      P +  P + SD+ K F+
Sbjct: 174 YDYKADIWSLGITAIELAEGKPPYSELP-PMKALFKIA-TNGPPGLRNPEKWSDEFKDFL 231

Query: 73  LRCFEKDPDKRATAGELLEDPF 94
            +C +K+P+KR TA +LL+ PF
Sbjct: 232 KKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 95.8 bits (239), Expect = 5e-24
 Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 2/77 (2%)

Query: 19  ADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK 78
           +DIWSLGCT++E+ TG PP+ +L  P AAL+R+     HP +P  +S + K F+++CF+K
Sbjct: 180 SDIWSLGCTVIELLTGNPPYYDLN-PMAALFRIVQDD-HPPLPEGISPELKDFLMQCFQK 237

Query: 79  DPDKRATAGELLEDPFL 95
           DP+ R TA +LL+ P++
Sbjct: 238 DPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 95.3 bits (238), Expect = 7e-24
 Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 1/85 (1%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP-AELSDKAKQ 70
              Y    DIWSLG  + E+ TGKPPF           ++G  K     P  ++S +AK 
Sbjct: 170 GKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKD 229

Query: 71  FILRCFEKDPDKRATAGELLEDPFL 95
            I +   KDP+KR TA E L+ PF 
Sbjct: 230 LIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 89.5 bits (222), Expect = 1e-21
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 2/83 (2%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           +SY+ +ADIWSLGC +VEM TGK PF +    Q A++++G     PEIP+ +S +A  F+
Sbjct: 187 TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIFKIG-ENASPEIPSNISSEAIDFL 244

Query: 73  LRCFEKDPDKRATAGELLEDPFL 95
            + FE D +KR TA ELL+ PFL
Sbjct: 245 EKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 87.6 bits (217), Expect = 6e-21
 Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 1/80 (1%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  +AD+WS+GCT+VEM T KPP+ E     AA++++     +P++P+ +S  A+ F+ R
Sbjct: 184 YGRKADVWSVGCTVVEMLTEKPPWAEF-EAMAAIFKIATQPTNPQLPSHVSPDARNFLRR 242

Query: 75  CFEKDPDKRATAGELLEDPF 94
            F ++  KR +A ELL   F
Sbjct: 243 TFVENAKKRPSAEELLRHFF 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 81.1 bits (201), Expect = 2e-18
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 6/86 (6%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIPAELSDKAKQF 71
           Y P+ DIWSLG   +EMA G+PP++    P  AL+ +   G   +    P + S + K F
Sbjct: 193 YGPKVDIWSLGIMCIEMAEGEPPYLRE-PPLRALFLITTKGIPPLKN--PEKWSPEFKDF 249

Query: 72  ILRCFEKDPDKRATAGELLEDPFLAD 97
           + +C  KDP+KR +A ELL+ PFL  
Sbjct: 250 LNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 8/87 (9%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE------LSDKA 68
           Y P+ D+WSLG  + E+ TGKPPF   G       ++    + P +  +       S++A
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPF--SGENILDQLQLIRRILGPPLEFDEPKWSSGSEEA 233

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFL 95
           K  I +C  KDP KR TA E+L+ P+ 
Sbjct: 234 KDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 80.3 bits (199), Expect = 3e-18
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-AALYRVGFHKMHPEIPAEL-SDKAKQF 71
           SYS  ADIWSLG T++E A GK PF+  G P    L +       P +PAE  S + + F
Sbjct: 176 SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDF 235

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           I  C +KDP KR +A ELL+ PF+
Sbjct: 236 ISACLQKDPKKRPSAAELLQHPFI 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 5/100 (5%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA-ELSDKAK 69
             S Y  +ADIWSLG T +E+A G+PP  +L  P   L+ +  +   P +   + S   K
Sbjct: 171 KQSGYDEKADIWSLGITAIELAKGEPPLSDL-HPMRVLFLIPKNNP-PSLEGNKFSKPFK 228

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLL 109
            F+  C  KDP +R +A ELL+  F+    A ++S   LL
Sbjct: 229 DFVSLCLNKDPKERPSAKELLKHKFIK--KAKKTSYLTLL 266

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 80.0 bits (197), Expect = 4e-18
 Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MHPEIPAELSDKAKQF 71
           S Y  ++DIWS+GCT+ EMATGKPP   +    AA++ +G H+ + P +P   S  A  F
Sbjct: 183 SGYGRKSDIWSIGCTVFEMATGKPPLASM-DRLAAMFYIGAHRGLMPRLPDSFSAAAIDF 241

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           +  C  +D  +R +A +LL   FL
Sbjct: 242 VTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 77.1 bits (190), Expect = 6e-17
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 5/85 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE----LSDKAK 69
            YS + DIWSLGC ++EM  G+ P+ +  +  A ++++G  +  P IP +    LS  A 
Sbjct: 188 GYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA-MFKLGNKRSAPPIPPDVSMNLSPVAL 246

Query: 70  QFILRCFEKDPDKRATAGELLEDPF 94
            F+  CF  +PD R TA ELL+ PF
Sbjct: 247 DFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 4/86 (4%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELSDKAK 69
              Y+ +ADIWSLG T +EMA GKPP+ ++  P  A++ +  +K  P    P + S +  
Sbjct: 173 EIGYNNKADIWSLGITAIEMAEGKPPYSDI-HPMRAIFMIP-NKPPPTLSDPEKWSPEFN 230

Query: 70  QFILRCFEKDPDKRATAGELLEDPFL 95
            F+ +C  KDP++R +A +LL+ PF+
Sbjct: 231 DFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
           + SY  ++DIWSLGC I E+    PPF      Q  L    + G       IP   S + 
Sbjct: 184 HMSYDEKSDIWSLGCLIYELCALSPPF--TARNQLQLASKIKEG---KFRRIPYRYSSEL 238

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFL 95
            + I      DPDKR +  ELL+ P +
Sbjct: 239 NEVIKSMLNVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 72.6 bits (178), Expect = 3e-15
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFI-ELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
           N +Y+ Q+D+WSLG +I+EMA G+ P+  E  +   A          P +P+  SD A+ 
Sbjct: 181 NPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQD 240

Query: 71  FILRCFEKDPDKRATAGELLEDPFL 95
           F+ +C  K P++R T  +LLE P+L
Sbjct: 241 FVAKCLNKIPNRRPTYAQLLEHPWL 265

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 71.4 bits (175), Expect = 5e-15
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPF--IELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
            Y    D+WS+GC I+EMAT KPP+   +  +  A ++++      P IP  LS   +  
Sbjct: 184 QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDV 243

Query: 72  ILRCFEKDPDKRATAGELLEDP 93
            LRC E  P+ R  + ELL+ P
Sbjct: 244 TLRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 71.0 bits (175), Expect = 6e-15
 Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N  Y+ ++DIWSLGC + E+ T K PF E  +      ++     +P IP++ S + +  
Sbjct: 177 NKPYNYKSDIWSLGCVLYELCTLKHPF-EGENLLELALKI-LKGQYPPIPSQYSSELRNL 234

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           +    +KDP++R +  ++L+ PF+
Sbjct: 235 VSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 70.9 bits (174), Expect = 9e-15
 Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 6/88 (6%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKAKQF 71
           Y  +ADIWSLG T++E+A  +PP  EL +P   L ++   K  P   + P++ S     F
Sbjct: 185 YDYKADIWSLGITLIELAQMEPPHHEL-NPMRVLLKI--LKSEPPTLDQPSKWSSSFNDF 241

Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLT 99
           +  C  KDPD R TA ELL+ PF++D +
Sbjct: 242 LKSCLVKDPDDRPTAAELLKHPFVSDQS 269

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 70.9 bits (173), Expect = 9e-15
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  +AD+WSLGCT+VEM T KPP+ E     AA++++     +P++P+ +S+ A+ F L 
Sbjct: 186 YGRKADVWSLGCTVVEMLTEKPPWAEY-EAMAAIFKIATQPTNPQLPSHISEHARDF-LG 243

Query: 75  CFEKDPDKRATAGELLEDPF 94
           C   +   R +A ELL  PF
Sbjct: 244 CIFVEARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 8/91 (8%)

Query: 9   YSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK----MHPEIPAEL 64
              ++SY  ++D+WSLG T +E+A GKPP  ++  P  AL+++  +       PE     
Sbjct: 189 EQPDASYDARSDVWSLGITAIELADGKPPLCDM-HPMRALFKIPRNPPPTLKSPE---NW 244

Query: 65  SDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
           S K   FI  C  K+ ++R    ELLE PF+
Sbjct: 245 SKKFNDFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK-- 69
              Y  + DIW+LG T +E+A  +PP  +L  P  AL+ +   K +   P  L DK K  
Sbjct: 178 KGGYDGKCDIWALGITAIELAELQPPMFDL-HPMRALFLIS--KSNFPPPK-LKDKEKWS 233

Query: 70  ----QFILRCFEKDPDKRATAGELLEDPF 94
                FI +C  KDP KR TA +LL+ PF
Sbjct: 234 PVFHDFIKKCLTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 69.8 bits (170), Expect = 3e-14
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 4/84 (4%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P  LS   + F
Sbjct: 191 AYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGT-PELQNPERLSAVFRDF 248

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC E D D+R +A ELL+ PFL
Sbjct: 249 LNRCLEMDVDRRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 68.9 bits (168), Expect = 5e-14
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 2/81 (2%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  +ADIWS+GCT+VEM T KPP+ E     AA++++     +P +P  +SD  + F+ R
Sbjct: 186 YGRKADIWSVGCTVVEMLTEKPPWAEF-EAMAAIFKIATQPTNPVLPPHVSDHCRDFLKR 244

Query: 75  CFEKDPDKRATAGELLEDPFL 95
            F  +   R +A ELL   F+
Sbjct: 245 IF-VEAKLRPSADELLRHTFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 69.0 bits (168), Expect = 6e-14
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P +LS   + F
Sbjct: 191 AYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGT-PELQNPEKLSPIFRDF 248

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC E D +KR +A ELL+ PFL
Sbjct: 249 LNRCLEMDVEKRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 67.6 bits (165), Expect = 2e-13
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P +LS   + F
Sbjct: 191 AYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGT-PELQNPEKLSAIFRDF 248

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC E D +KR +A ELL+ PFL
Sbjct: 249 LNRCLEMDVEKRGSAKELLQHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-----GFHKMHPEIPAELSDKAK 69
           Y  + DIWSLG  ++EM  G+PP+     P  A+ R+        K   ++   L     
Sbjct: 192 YGTEVDIWSLGIMVIEMVDGEPPYFN-EPPLQAMKRIRDNLPPKLKNLHKVSPRLRS--- 247

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLA 96
            F+ R   +DP +RATA ELL  PFLA
Sbjct: 248 -FLDRMLVRDPAQRATAAELLNHPFLA 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKA-----K 69
           Y  +ADIWS G T +E+ATG  P+ +   P   +  +      P +      K      +
Sbjct: 184 YDFKADIWSFGITAIELATGAAPYSKY--PPMKVLMLTLQNDPPSLETGADYKKYSKSFR 241

Query: 70  QFILRCFEKDPDKRATAGELLEDPF 94
           + I  C +KDP KR TA ELL+  F
Sbjct: 242 KMISLCLQKDPSKRPTAEELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 65.6 bits (161), Expect = 5e-13
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y    D WSLG  + EM TGKPPF      +  +Y     K     P  LS +A+  I  
Sbjct: 170 YGKAVDWWSLGVLLYEMLTGKPPF--YAEDRKEIYEK-ILKDPLRFPEFLSPEARDLISG 226

Query: 75  CFEKDPDKRATAGE 88
             +KDP KR  +G 
Sbjct: 227 LLQKDPTKRLGSGG 240

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA-ELSDKAKQF 71
             Y  +ADIWSLG TI EMATG PP+ ++     A+  +      P +     S   ++F
Sbjct: 177 KYYDTKADIWSLGITIYEMATGNPPYSDV-DAFRAMMLIP-KSKPPRLEDNGYSKLLREF 234

Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTATRSSS 105
           +  C +++P +R +A ELL+  ++   + T  S 
Sbjct: 235 VAACLDEEPKERLSAEELLKSKWIKAHSKTPVSI 268

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 2/83 (2%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-LSDKAKQF 71
             Y  ++D+WSLG T++E+ATG+ P+    +P   L +V   +  P++PAE  S + + F
Sbjct: 182 KGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV-VEEPSPQLPAEKFSPEFQDF 240

Query: 72  ILRCFEKDPDKRATAGELLEDPF 94
           + +C +K+  +R    ELL+ PF
Sbjct: 241 VNKCLKKNYKERPNYPELLQHPF 263

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 63.6 bits (154), Expect = 5e-12
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P +LS   + F
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGT-PELQNPEKLSAIFRDF 249

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC + D +KR +A ELL+  FL
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 63.1 bits (154), Expect = 5e-12
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 12/91 (13%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH-------PEIPA-EL 64
           + YS ++DIWSLG +++E+ATG+ P+     P+       F  +        P +P+ + 
Sbjct: 174 NDYSVKSDIWSLGLSLIELATGRFPY----PPENDPPDGIFELLQYIVNEPPPRLPSGKF 229

Query: 65  SDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
           S   + F+  C  KDP +R +  ELLE PF+
Sbjct: 230 SPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 63.2 bits (152), Expect = 9e-12
 Identities = 34/144 (23%), Positives = 48/144 (33%), Gaps = 10/144 (6%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL----------YRVGFHKMHPEIP 61
            +  S  +DIWSLG T+ E+ TG PPF    +  A                   + P  P
Sbjct: 185 LAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNP 244

Query: 62  AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPE 121
             +S  A   + +   KDP  R ++   L    LA L    S  S LL P+ +   +   
Sbjct: 245 ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSL 304

Query: 122 QDRFYLCKKDSQRRITLSGVLDQD 145
                               L  D
Sbjct: 305 PPSLEALISSLNSLAISGSDLKLD 328

Length = 384

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 62.4 bits (151), Expect = 1e-11
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 6/95 (6%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKA 68
           ++ Y  +ADIWSLG T++EMA  +PP  EL +P   L ++   K  P     P++ S + 
Sbjct: 189 DTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIA--KSEPPTLSQPSKWSMEF 245

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADLTATRS 103
           + F+    +K P+ R +A +LLE PF++ +T+ R 
Sbjct: 246 RDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRP 280

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 62.0 bits (150), Expect = 1e-11
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  +L  P   L+ +      P +  + S   K+F+
Sbjct: 176 SAYDFKADIWSLGITAIELAKGEPPNSDL-HPMRVLFLIP-KNSPPTLEGQYSKPFKEFV 233

Query: 73  LRCFEKDPDKRATAGELLEDPFLADLTATRS 103
             C  KDP  R TA ELL+  F+   T   S
Sbjct: 234 EACLNKDPRFRPTAKELLKHKFITRYTKKTS 264

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 61.6 bits (149), Expect = 2e-11
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  +AD+WS+ CT+VEM T KPP+ E     AA++++      P +P  +SD  + F+ +
Sbjct: 186 YGRKADVWSVACTVVEMLTEKPPWAEY-EAMAAIFKIATQPTKPMLPDGVSDACRDFLKQ 244

Query: 75  CFEKDPDKRATAGELLEDPF 94
            F ++  +R TA  LL  PF
Sbjct: 245 IFVEE-KRRPTAEFLLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 61.6 bits (149), Expect = 2e-11
 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 6/96 (6%)

Query: 4   IFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--- 60
           + + + S +  Y  +AD+WSLG T++EMA  +PP  EL +P   L ++   K  P     
Sbjct: 174 VVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL-NPMRVLLKIA--KSEPPTLAQ 230

Query: 61  PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
           P+  S + K F+ +C EK+ D R T  +LL+ PF+ 
Sbjct: 231 PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVT 266

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 61.2 bits (148), Expect = 2e-11
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  ++  P   L+ +  +   P +  E S   K+FI
Sbjct: 176 SAYDSKADIWSLGITAIELAKGEPPNSDM-HPMRVLFLIPKNNP-PTLTGEFSKPFKEFI 233

Query: 73  LRCFEKDPDKRATAGELLEDPFL 95
             C  KDP  R TA ELL+  F+
Sbjct: 234 DACLNKDPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 40/138 (28%), Positives = 53/138 (38%), Gaps = 48/138 (34%)

Query: 5   FLTQYSV------------NSSYSPQADIWSLGCTIVEMATGKPPF------------IE 40
           FLT+Y V            +S Y+   DIWS+GC   E+ T KP F            +E
Sbjct: 162 FLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVE 221

Query: 41  -LGSP-----------QAALY--------RVGFHKMHPEIPAELSDKAKQFILRCFEKDP 80
            LG+P           +A  Y        +    K+ P    E    A   + +    DP
Sbjct: 222 VLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPE----AIDLLEKMLVFDP 277

Query: 81  DKRATAGELLEDPFLADL 98
            KR TA E L  P+LA L
Sbjct: 278 KKRITADEALAHPYLAQL 295

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 61.2 bits (148), Expect = 3e-11
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  EL  P   L+ +  +   P +    S   K+F+
Sbjct: 176 SAYDSKADIWSLGITAIELAKGEPPHSEL-HPMKVLFLIPKNN-PPTLEGNYSKPLKEFV 233

Query: 73  LRCFEKDPDKRATAGELLEDPFL 95
             C  K+P  R TA ELL+  F+
Sbjct: 234 EACLNKEPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA---LYRVGFHKMHPEIPAEL---- 64
              YS  +D+WSLG T++E+A  + PF   G P      L     +  +PE+  E     
Sbjct: 177 GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGI 236

Query: 65  --SDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA 100
             S++ K FI +C EKDP +R T  ++LE P++     
Sbjct: 237 KWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 60.8 bits (147), Expect = 4e-11
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 4/84 (4%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFI 72
           Y P+ DIWSLG  ++EM  G+PP+     P     ++    + P++    ++S   K F+
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFL 250

Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
            R   +DP +RATA ELL+ PFLA
Sbjct: 251 DRLLVRDPAQRATAAELLKHPFLA 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 59.8 bits (145), Expect = 8e-11
 Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              YS ++DIWSLGC + EMAT  PPF E  S Q   Y+V   K +P IP   S   + F
Sbjct: 175 GRPYSYKSDIWSLGCLLYEMATFAPPF-EARSMQDLRYKVQRGK-YPPIPPIYSQDLQNF 232

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           I    +  P  R    ++L  P +
Sbjct: 233 IRSMLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 59.7 bits (144), Expect = 1e-10
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 18/92 (19%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---------GFHKMHPEIPAE 63
           + Y  + DIWSLG  ++EM  G+PP+    SP  A+ R+           HK+ P +   
Sbjct: 192 TPYGTEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNAHKISPVL--- 247

Query: 64  LSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
                + F+ R   ++P +RATA ELL+ PFL
Sbjct: 248 -----RDFLERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 58.6 bits (143), Expect = 2e-10
 Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 28/108 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAALYRVGFHKM----- 56
           YS   DIWS+GC   EM TGKP F     I+        LG+P    +  G  K+     
Sbjct: 176 YSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP-GVTKLPDYKP 234

Query: 57  ----HPEIPAE-----LSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
                P    E     L  +    + +  + +P KR +A E L+ P+ 
Sbjct: 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 58.9 bits (142), Expect = 2e-10
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 10/92 (10%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK----MHPEIPAE 63
           QY  + SY  + D+WSLG T +E+  G PP  ++  P   L+++  +     +HPE   +
Sbjct: 205 QY--DYSYDARCDVWSLGITAIELGDGDPPLFDM-HPVKTLFKIPRNPPPTLLHPE---K 258

Query: 64  LSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
                  FI +C  KD + R +   LLE PF+
Sbjct: 259 WCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH---KMHPEIPAELSDKAKQF 71
           Y  ++D+WSLG T+ E+ATGK P+ +  S    L +V       +      E S     F
Sbjct: 187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNF 246

Query: 72  ILRCFEKDPDKRATAGELLEDPFLAD 97
           I  C  KD  KR    ELLE PF+ D
Sbjct: 247 INLCLIKDESKRPKYKELLEHPFIKD 272

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 57.5 bits (140), Expect = 4e-10
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 35/114 (30%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAALY--------RV 51
           +SYS   DIW+LGC + E+ T +P F     I+        LG+P    +        ++
Sbjct: 174 TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233

Query: 52  GF----------HKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
           GF          H++ P    E  D     I      DP KR TA + L+ P+ 
Sbjct: 234 GFRFPQFAPTSLHQLIPNASPEAID----LIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 57.5 bits (139), Expect = 8e-10
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 20  DIWSLGCTIVEMATGKPPF-IELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK 78
           DIWSLG +I+E   G+ PF +      A+L         PE PA  S + + FI  C ++
Sbjct: 255 DIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQR 314

Query: 79  DPDKRATAGELLEDPFLADLTATRSSS 105
           +P KR +A +LL+ PF+      +   
Sbjct: 315 EPAKRWSAMQLLQHPFILRAQPGQGQG 341

Length = 353

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 57.1 bits (138), Expect = 8e-10
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  + D+WSLG T +E+A  KPP   + +  +ALY +  +        + SD  + F+  
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNDSPTLSSNDWSDYFRNFVDS 249

Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C +K P  R ++ ELL+  F+
Sbjct: 250 CLQKIPQDRPSSEELLKHRFV 270

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 56.6 bits (136), Expect = 1e-09
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 10/90 (11%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH---KMH-PEI-PAELS 65
           ++S+Y  + D+WSLG T +E+  G PP  +L  P  AL+++  +    +H PE+   E +
Sbjct: 202 LDSTYDARCDVWSLGITAIELGDGDPPLADL-HPMRALFKIPRNPPPTLHQPELWSNEFN 260

Query: 66  DKAKQFILRCFEKDPDKRATAGELLEDPFL 95
           D    FI +C  KD +KR T  +LL+  F+
Sbjct: 261 D----FIRKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 28/114 (24%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSPQA-ALYRVGFHK--- 55
           S Y+P  DIWS+GC   E+ TGKP F               LG+P    + RV   K   
Sbjct: 183 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARR 242

Query: 56  ----MHPEIPAELSDK---AKQFILRCFEK----DPDKRATAGELLEDPFLADL 98
               M  + P   S K   A    LR  E+    DP  R TA E L DP+   L
Sbjct: 243 YLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL 296

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
           +   +S   D WSLGC + E   G PPF    +P+     +   K+      E+SD+A  
Sbjct: 174 LGQGHSKTVDWWSLGCILYEFLVGIPPFHG-ETPEEIFQNILNGKIEWPEDVEVSDEAID 232

Query: 71  FILRCFEKDPDKRATAG---ELLEDPFLADL 98
            I +    DP+KR  A    E+   PF   +
Sbjct: 233 LISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y+ ++D+W+LG  + E  TGK PF    + Q AL       + P +    S +  Q I +
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFD--ANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQ 235

Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C  KD  +R    +LL +P L
Sbjct: 236 CLTKDYRQRPDTFQLLRNPSL 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 54.3 bits (131), Expect = 7e-09
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE--LSDKAK 69
           N  Y  +AD+WSLG ++VE+ATG+ P+    +    L ++   +  P +P     S    
Sbjct: 192 NPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKI-LQEEPPSLPPNEGFSPDFC 250

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLAD 97
            F+  C  KD  KR    ELL+ PF+  
Sbjct: 251 SFVDLCLTKDHRKRPKYRELLQHPFIRR 278

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 54.3 bits (130), Expect = 7e-09
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 12/87 (13%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK-QFIL 73
           Y  + DIWSLG  ++EM  G+PP+      QA        ++   +P  + D  K   +L
Sbjct: 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA------MRRIRDNLPPRVKDSHKVSSVL 248

Query: 74  RCF-----EKDPDKRATAGELLEDPFL 95
           R F      ++P +RATA ELL+ PFL
Sbjct: 249 RGFLDLMLVREPSQRATAQELLQHPFL 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 54.0 bits (130), Expect = 8e-09
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 15/100 (15%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-----------FHKMHPEIPAE 63
           Y+ ++D+WSLG +I+E+A GK PF    S      +               +  P +P+ 
Sbjct: 179 YTVKSDVWSLGISIIELALGKFPFAF--SNIDDDGQDDPMGILDLLQQIVQEPPPRLPSS 236

Query: 64  -LSDKAKQFILRCFEKDPDKRATAGELLE-DPFLADLTAT 101
              +  + F+  C  KDP +R T  +L    PF+  L A+
Sbjct: 237 DFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRAS 276

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 54.3 bits (130), Expect = 8e-09
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  + D+WSLG T +E+A  KPP   + +  +ALY +  ++       E SD  + F+  
Sbjct: 201 YDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPTLQSNEWSDYFRNFVDS 259

Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C +K P  R T+ ELL+  F+
Sbjct: 260 CLQKIPQDRPTSEELLKHMFV 280

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 35/119 (29%)

Query: 13  SSYSPQADIWSLGCTIVEMATGK---------------PPFIELGSPQAALYRVGFHKMH 57
           + Y+ Q+DIWSLG ++VEMA G+                  +  G  + +   V  H   
Sbjct: 173 THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPD 232

Query: 58  -------------------PEIP-AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
                              P++P    SD+ + F+ +C +K+P +RA   EL + PF+ 
Sbjct: 233 SPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK 291

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 53.7 bits (130), Expect = 1e-08
 Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 13/90 (14%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKA 68
                  +D+W+LGC I +M TGKPPF   GS +   Y   F K+       P      A
Sbjct: 196 EKPAGKSSDLWALGCIIYQMLTGKPPF--RGSNE---YLT-FQKILKLEYSFPPNFPPDA 249

Query: 69  KQFILRCFEKDPDKRATAG----ELLEDPF 94
           K  I +    DP  R        EL   PF
Sbjct: 250 KDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  + D+WSLG T +E+A  KPP   + +  +ALY +  +        E +D  + F+  
Sbjct: 197 YDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNDSPTLQSNEWTDSFRGFVDY 255

Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C +K P +R  + ELL   F+
Sbjct: 256 CLQKIPQERPASAELLRHDFV 276

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-----HKMHPEIP-AELSDKA 68
           Y   +D+WSLG + +E+A G+ P+ ++   Q +L  +        +  P +P  + S+K 
Sbjct: 170 YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF 229

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFL 95
             FI +C  K P +R     L++ PF+
Sbjct: 230 VHFITQCMRKQPKERPAPENLMDHPFI 256

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 52.8 bits (126), Expect = 2e-08
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 13/90 (14%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA------ELS 65
           +++Y  ++D+WSLG T +EMA G PP  ++  P  AL+ +      P  PA      + S
Sbjct: 190 DATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPMRALFLI------PRNPAPRLKSKKWS 242

Query: 66  DKAKQFILRCFEKDPDKRATAGELLEDPFL 95
            K + FI  C  K+  +R T  +L++ PF+
Sbjct: 243 KKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y+ ++DIW+LGC + E+ T K  F    +    L        +  + +  S +    + 
Sbjct: 177 KYNFKSDIWALGCVLYELLTLKRTFD--ATNPLNLVVKIVQGNYTPVVSVYSSELISLVH 234

Query: 74  RCFEKDPDKRATAGELLEDPFL 95
              ++DP+KR TA E+L+ P L
Sbjct: 235 SLLQQDPEKRPTADEVLDQPLL 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 51.7 bits (124), Expect = 5e-08
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELG--SPQAALYRVGFHKMHPEIPAELSDKAKQ 70
             +    D WSLG    E+ TG  PF   G  + Q+ + R       P  P  +S +A+ 
Sbjct: 183 GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-KPPFPKTMSAEARD 241

Query: 71  FILRCFEKDPDKRATAG---ELLEDPFLADL 98
           FI +  EKDP KR  A    E+   PF   +
Sbjct: 242 FIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 51.4 bits (124), Expect = 6e-08
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           ++ ++D+WS G  + E+ T G  P+  L S +  L  +         P    D+  + +L
Sbjct: 184 FTSKSDVWSFGVLLWEIFTLGATPYPGL-SNEEVLEYLR-KGYRLPKPEYCPDELYELML 241

Query: 74  RCFEKDPDKRATAGELLE 91
            C++ DP+ R T  EL+E
Sbjct: 242 SCWQLDPEDRPTFSELVE 259

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 50.7 bits (122), Expect = 7e-08
 Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 34/86 (39%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
                  YS ++DIWSLG  + E+                                   +
Sbjct: 164 VLLGKGYYSEKSDIWSLGVILYEL----------------------------------PE 189

Query: 68  AKQFILRCFEKDPDKRATAGELLEDP 93
            K  I +  +KDP+KR +A E+LE  
Sbjct: 190 LKDLIRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 51.1 bits (123), Expect = 8e-08
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 24/108 (22%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSP-------QAALYRV 51
            SSY+   D+WS+GC   E+   +P F      +        +G P         +L R 
Sbjct: 180 QSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS 239

Query: 52  GFHKMHPEIPA----ELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
            F    P        E+ ++    + +    +P KR +A E L+ P+ 
Sbjct: 240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 36/118 (30%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF--------IE----------------LGSPQAA 47
           ++ Y+   D+WS+GC + EM  GKP F        +E                + SP AA
Sbjct: 187 STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAA 246

Query: 48  --------LYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD 97
                     R    ++ P+   +  D     + +    +P+KR TA E LE P++A 
Sbjct: 247 TMLDSLPSRPRKPLDELLPKASDDALD----LLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 50.4 bits (120), Expect = 1e-07
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK----- 69
           Y+   DIW++G T +E+A  +PP  +L  P  AL+ +         P +L DK K     
Sbjct: 186 YNQLCDIWAVGITAIELAELQPPMFDL-HPMRALFLMTKSNFQ---PPKLKDKMKWSNSF 241

Query: 70  -QFILRCFEKDPDKRATAGELLEDPF 94
             F+     K+P KR TA +LL+ PF
Sbjct: 242 HHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 29/112 (25%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF-----------------------IELGSPQAALY 49
           ++Y    D+W++GC + E+  G+P F                        EL S      
Sbjct: 177 TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236

Query: 50  RVGFHKMHPEIPAE------LSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
            V F +       E      +S  A  F+  C   DP +R T  ELL+ P+ 
Sbjct: 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM----HPEIPAE-LSDKAK 69
           Y+ ++DIWSLGC + EMA  + PF      +  LY +   K+    +P +PA+  S++ +
Sbjct: 183 YNFKSDIWSLGCLLYEMAALQSPFY---GDKMNLYSL-CKKIEKCDYPPLPADHYSEELR 238

Query: 70  QFILRCFEKDPDKRATAGELLE 91
             + RC   DP+KR     +L+
Sbjct: 239 DLVSRCINPDPEKRPDISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 48.8 bits (116), Expect = 4e-07
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N  Y+ ++D+W+LGC + EMAT K  F       + +YR+   K+ P +P + S +  + 
Sbjct: 176 NKPYNYKSDVWALGCCVYEMATLKHAF-NAKDMNSLVYRIIEGKL-PPMPKDYSPELGEL 233

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           I     K P+KR +   +L  P++
Sbjct: 234 IATMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 48.5 bits (115), Expect = 6e-07
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  + D+WSLG T +E+A  KPP   + +  +ALY +  ++         S+  + F+  
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPALQSGHWSEYFRNFVDS 249

Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C +K P  R T+  LL+  F+
Sbjct: 250 CLQKIPQDRPTSEVLLKHRFV 270

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 48.5 bits (115), Expect = 6e-07
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           +++Y  ++DIWSLG T +EMA G PP  ++  P  AL+ +  +        + S K   F
Sbjct: 200 DATYDYRSDIWSLGITAIEMAEGAPPLCDM-HPMRALFLIPRNPPPKLKSKKWSKKFIDF 258

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           I  C  K+   R +  +LL+ PF+
Sbjct: 259 IEGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           ++ ++D+WS G  + E+ T G+ P+  + S +  L  +  +      P     +    +L
Sbjct: 180 FTSKSDVWSFGVLLWEIFTLGEQPYPGM-SNEEVLEYLK-NGYRLPQPPNCPPELYDLML 237

Query: 74  RCFEKDPDKRATAGELLE 91
           +C+ +DP+ R T  EL+E
Sbjct: 238 QCWAEDPEDRPTFSELVE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 47.9 bits (114), Expect = 8e-07
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N  Y+ ++DIW+LGC + EM T K  F E G+ +  + ++     +P + +  S   +  
Sbjct: 175 NRPYNNKSDIWALGCVLYEMCTLKHAF-EAGNMKNLVLKI-IRGSYPPVSSHYSYDLRNL 232

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + + F+++P  R +   +LE  F+
Sbjct: 233 VSQLFKRNPRDRPSVNSILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           ++ ++D+WS G  + E+ T G+ P+  + S    L  +         P     +  + +L
Sbjct: 181 FTSKSDVWSFGVLLWEIFTLGEEPYPGM-SNAEVLEYLK-KGYRLPKPPNCPPELYKLML 238

Query: 74  RCFEKDPDKRATAGELLE 91
           +C+ +DP+ R T  EL+E
Sbjct: 239 QCWAEDPEDRPTFSELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 47.9 bits (115), Expect = 9e-07
 Identities = 28/111 (25%), Positives = 39/111 (35%), Gaps = 32/111 (28%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAA-------LYRVGF 53
            Y P+ D+WS+GC + E+  GKP F     +E         GSP          L     
Sbjct: 178 RYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237

Query: 54  HKMHPEIPAELSDKAKQFI----------LRCFEKDPDKRATAGELLEDPF 94
            K        L +  K  I          L     DP KR +A + L+  +
Sbjct: 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTL--DPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--HPEIPAELSDKAKQFILRC 75
            +D WSLGC I E   G PPF    +P A    +   ++    E+    S +A   I R 
Sbjct: 173 MSDWWSLGCVIFEFLFGYPPF-HAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRL 231

Query: 76  FEKDPDKRATAG---ELLEDPFLADL 98
              DP KR  A    E+   PF   +
Sbjct: 232 LCMDPAKRLGANGYQEIKSHPFFKSI 257

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 20  DIWSLGCTIVEMATGKPPFIELG--SPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           D WSLG  I E+ TG  PF   G  + Q+ + R    K  P  P+ +  +A+  + +   
Sbjct: 189 DWWSLGILIFELLTGASPFTLEGERNTQSEVSR-RILKCDPPFPSFIGPEAQDLLHKLLR 247

Query: 78  KDPDKRATAG-----ELLEDPFLADL 98
           KDP KR  AG     E+ E PF   L
Sbjct: 248 KDPKKRLGAGPQGASEIKEHPFFKGL 273

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 36/115 (31%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF-------------------------IELGSPQA 46
           ++ Y    DIW++GC + EM TG+P F                         I   +P  
Sbjct: 175 DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234

Query: 47  ALYRV-------GFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
           A  R+          K  P++   + D AKQ    C   DPD R ++ +LL   F
Sbjct: 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQ----CLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 35/112 (31%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF--------IEL-----GSPQAALYR-----VGFHKM 56
           Y P  D+WS GC + E+ T KP F        +EL     GSP  A++        F+ M
Sbjct: 195 YGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTM 254

Query: 57  HPE-------------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
            P+             IP    D     +      DP KR TA E L  P+L
Sbjct: 255 KPKKQYRRRLREEFSFIPTPALDLLDHML----TLDPSKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 28/111 (25%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPF------------IEL-GSPQAALYRV-------GF 53
            Y+   DIWS+GC + E+ TGK  F            + L G+P   L +         +
Sbjct: 192 HYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNY 251

Query: 54  HKMHPEIP----AEL----SDKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
            +  P++P     E+    +  A   + +    DPDKR TA E L  P+LA
Sbjct: 252 IQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 46.1 bits (109), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N  Y+ + DIWSLGC + E+ T K PF E  +    + ++      P I    S   +  
Sbjct: 176 NRPYNNKTDIWSLGCVLYELCTLKHPF-EGNNLHQLVLKICQGYFAP-ISPNFSRDLRSL 233

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           I + F+  P  R +   +L+ PFL
Sbjct: 234 ISQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 28/112 (25%), Positives = 41/112 (36%), Gaps = 35/112 (31%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSP---------QAALY--- 49
           YS   DIWS+GC   E+ + +P F     I+        LG+P           A     
Sbjct: 176 YSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF 235

Query: 50  ------RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
                  +   K+ P      S +A   + +    DP KR TA + L  P+ 
Sbjct: 236 SFPKKAGMPLPKLFP----NASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y P  D W+LG  + EM  G+ PF   G  +  L++          P  LS +AK  + 
Sbjct: 172 PYGPAVDWWALGVLLYEMLAGQSPF--EGDDEDELFQSILED-EVRYPRWLSKEAKSILK 228

Query: 74  RCFEKDPDKRATAGE 88
               K+P+KR     
Sbjct: 229 SFLTKNPEKRLGCLP 243

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE--LSDKAKQF 71
            Y  + D WSLG  + EM  G PPF    + Q    ++   K     P +  +S +A   
Sbjct: 206 PYGLECDWWSLGVILYEMLYGFPPFYS-DTLQETYNKIINWKESLRFPPDPPVSPEAIDL 264

Query: 72  ILRCFEKDPDKR-ATAGELLEDPF 94
           I R    DP+ R  +  E+   PF
Sbjct: 265 ICRLL-CDPEDRLGSFEEIKSHPF 287

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 10/89 (11%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK-- 69
           N  Y+   DIW++G T +E+A  +PP  +L  P  AL+ +         P +L DK K  
Sbjct: 183 NGGYNQLCDIWAVGITAIELAELQPPMFDL-HPMRALFLMSKSNFQ---PPKLKDKTKWS 238

Query: 70  ----QFILRCFEKDPDKRATAGELLEDPF 94
                F+     K+P KR TA  LL   F
Sbjct: 239 STFHNFVKISLTKNPKKRPTAERLLTHLF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 23/69 (33%), Positives = 27/69 (39%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           YS   D WSLG T  E   GK P+           R          PA  S +A   I +
Sbjct: 176 YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINK 235

Query: 75  CFEKDPDKR 83
             E+DP KR
Sbjct: 236 LLERDPQKR 244

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 45.3 bits (107), Expect = 6e-06
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  ++DIWSLGC + EM      F   G    ++         P +P   S +    +  
Sbjct: 182 YDSKSDIWSLGCILYEMCCLAHAFE--GQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQS 239

Query: 75  CFEKDPDKRATAGELLEDPFL 95
              KDP  R +A E+L +PF+
Sbjct: 240 MLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 45.4 bits (107), Expect = 6e-06
 Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N  Y+ ++DIWSLGC + E+ T K PF +  S +  + +V      P +P+  S + +  
Sbjct: 174 NMPYNNKSDIWSLGCILYELCTLKHPF-QANSWKNLILKVCQGSYKP-LPSHYSYELRSL 231

Query: 72  ILRCFEKDPDKRATAGELL 90
           I + F+++P  R +A  +L
Sbjct: 232 IKQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 45.7 bits (108), Expect = 6e-06
 Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 10/90 (11%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR-VGFHKMHPEIPAE-LSDKAKQFI 72
           Y+   D WSLG  + EM  G  PF    + Q  +YR + F K+    P   LSD+ +QF+
Sbjct: 174 YTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ--MYRNIAFGKV--RFPKNVLSDEGRQFV 229

Query: 73  LRCFEKDPDKR----ATAGELLEDPFLADL 98
                ++P  R      A EL E PF AD+
Sbjct: 230 KGLLNRNPQHRLGAHRDAVELKEHPFFADI 259

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 45.6 bits (108), Expect = 7e-06
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 13/109 (11%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK---- 67
              Y    D ++LGCT+ EM  G+ PF +         +    +   E+  E  DK    
Sbjct: 168 GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE---KEELKRRTLEMAVEYPDKFSPE 224

Query: 68  AKQFILRCFEKDPDKR-----ATAGELLEDPFLADLTATRSSSSGLLSP 111
           AK       +KDP+KR      +A E+ E P   DL   R   +G+L P
Sbjct: 225 AKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR-LEAGMLEP 272

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 45.4 bits (107), Expect = 8e-06
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELG--SPQAALYRVGFHKMHPEIPAELSDKAK 69
           +  +    D WS+G  + E+ TG  PF   G  + QA + R    K  P  P E+S  AK
Sbjct: 182 DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR-RILKSEPPYPQEMSALAK 240

Query: 70  QFILRCFEKDPDKRATAG-----ELLEDPFLADL 98
             I R   KDP KR   G     E+ + PF   +
Sbjct: 241 DIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (107), Expect = 8e-06
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 12/103 (11%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE---IPAELSDKAKQF 71
           Y+   D W+LG  + EM TG PPF +    +  +YR    K+  E    P      AK  
Sbjct: 170 YTKAVDWWTLGVLLYEMLTGLPPFYDENVNE--MYR----KILQEPLRFPDGFDRDAKDL 223

Query: 72  ILRCFEKDPDKR---ATAGELLEDPFLADLTATRSSSSGLLSP 111
           ++    +DP +R     A E+   PF + L+  +    G+  P
Sbjct: 224 LIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKLLMKGIQPP 266

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 45.0 bits (107), Expect = 9e-06
 Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 28/107 (26%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----------IE--LGSPQAALYRVGFHK---MHP 58
           Y P+ DIW++GC   E+ +  P F           I   LG+P A + +  F K   M+ 
Sbjct: 176 YGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKK-FRKSRHMNY 234

Query: 59  EIPAE-----------LSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
             P++            S +    + +    DPD+R TA + L  P+
Sbjct: 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 28/112 (25%), Positives = 40/112 (35%), Gaps = 35/112 (31%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAALY------------ 49
           Y P  D+W++GC   E+  G P F     IE        LG+P    +            
Sbjct: 178 YDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237

Query: 50  ------RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
                  +   ++ P+   E  D  K   L     DP KR +A E L  P+ 
Sbjct: 238 TFPESKPIPLEEIFPDASPEALDLLKGL-LVY---DPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE--LSDKAKQFI 72
           Y+ + D WSLG  + EM  G PPF    +PQ    ++   K   + P E  LS +AK  I
Sbjct: 216 YNKECDWWSLGVIMYEMLVGYPPFCS-DNPQETYRKIINWKETLQFPDEVPLSPEAKDLI 274

Query: 73  LRCFEKDPDKR---ATAGELLEDPF 94
            R    + ++R       E+   PF
Sbjct: 275 KR-LCCEAERRLGNNGVNEIKSHPF 298

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y+ ++DIW+LGC + E+A+ K  F E  +  A + ++      P I    S   +Q IL 
Sbjct: 178 YNQKSDIWALGCVLYELASLKRAF-EAANLPALVLKIMSGTFAP-ISDRYSPDLRQLILS 235

Query: 75  CFEKDPDKRATAGELLEDP 93
               DP KR    +++  P
Sbjct: 236 MLNLDPSKRPQLSQIMAQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 12  NSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALY-RVGFHKMHPEI-PAELSDKA 68
           +  ++ ++D+WS G  + E+ T G+ P+  + + +       G+    PE  P EL    
Sbjct: 178 DGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPDEL---- 233

Query: 69  KQFILRCFEKDPDKRATAGELLED 92
            + +L+C+  DP+ R T  EL+ED
Sbjct: 234 YELMLQCWAYDPEDRPTFSELVED 257

Length = 258

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 28/108 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAAL---------YRVG 52
           YS   DIWS+GC   EM   +P F     I+        LG+P   +         Y+  
Sbjct: 177 YSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT 236

Query: 53  FHKMHPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
           F K   +     +P  L +     + +    DP KR +A   L+ P+ 
Sbjct: 237 FPKWARQDLSKVVP-NLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 43.9 bits (103), Expect = 3e-05
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 26/112 (23%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IE-LGSPQAALYR--------V 51
           ++Y+   D+WSLGC I EM  G P F            I+ LG+P     +        +
Sbjct: 246 TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADI 305

Query: 52  GFHKMHPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
            F  + P+      P    D A  FI +  + +P KR    E L DPF  DL
Sbjct: 306 KFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357

Length = 440

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 9/84 (10%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM----HPEIPAE-LSDK 67
           + Y+ ++DIWSLGC + EMA  + PF      +  L+ +   K+    +P +P E  S+K
Sbjct: 181 NGYNFKSDIWSLGCLLYEMAALQSPFY---GDKMNLFSL-CQKIEQCDYPPLPTEHYSEK 236

Query: 68  AKQFILRCFEKDPDKRATAGELLE 91
            ++ +  C   DPD+R   G + +
Sbjct: 237 LRELVSMCIYPDPDQRPDIGYVHQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 31/128 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIEL-----------GSPQAALYR------------V 51
           Y+ ++DI+S+G T  E+A G  PF ++           G+    L +             
Sbjct: 187 YNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQS 246

Query: 52  GFHKMHPEIPAELSDKAK--------QFILRCFEKDPDKRATAGELLEDPFLADLTATRS 103
                HP     +             QF+  C ++DP+ R +A +LL   F        +
Sbjct: 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRRNT 306

Query: 104 SSSGLLSP 111
           S   LL P
Sbjct: 307 SLLDLLKP 314

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 27/108 (25%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKP--P-----------FIELGSP--------QAALYRV 51
             Y    D+WS+GC   E+    P  P           F  LG+P         +    V
Sbjct: 178 RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237

Query: 52  GFHKMHPEIPAE-----LSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
            F K  P  P +      SD A   + R    +P+KR TA + LE P+
Sbjct: 238 EF-KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 29/112 (25%), Positives = 39/112 (34%), Gaps = 28/112 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF------------------------IELGSPQAALYR 50
           Y+   DIWS+GC + EM TGKP F                         +L S  A  Y 
Sbjct: 193 YTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYV 252

Query: 51  VGFHKMHPEIPAELSDKAKQFILRCFEK----DPDKRATAGELLEDPFLADL 98
               +   +    L   A    +   EK    D + R TA E L  P+  + 
Sbjct: 253 KKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 41.6 bits (98), Expect = 6e-05
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           +     SY+ +ADI+SLG T+ E    + P+ E     +A+  +  + M  + P + S+ 
Sbjct: 74  EVIQGQSYTEKADIYSLGITLYEALDYELPYNEE-RELSAILEILLNGMPADDPRDRSNL 132

Query: 68  AK--------QFILRCFEKDPDKRATAGELLEDPFLAD 97
                      F+  C  + P +R  A   L       
Sbjct: 133 EGVSAARSFEDFMRLCASRLPQRREAANHYLAHCRALF 170

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 42.7 bits (100), Expect = 7e-05
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 11/92 (11%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK----MHPEIPAELSD 66
           + + Y+   D WSLG  + EM  G PPF    +PQ    +V   K      PE+P  +S+
Sbjct: 209 MQTGYNKLCDWWSLGVIMYEMLIGYPPFCS-ETPQETYRKVMNWKETLVFPPEVP--ISE 265

Query: 67  KAKQFILRCFEKDPDKRATAG---ELLEDPFL 95
           KAK  ILR F  D + R  +    E+   PF 
Sbjct: 266 KAKDLILR-FCTDSENRIGSNGVEEIKSHPFF 296

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           Y+ ++D+W+ G T+ E+AT G+ P+   G     +Y    H    + P +  D+    + 
Sbjct: 192 YTSKSDVWAFGVTMWEIATRGQTPYP--GVENHEIYDYLRHGNRLKQPEDCLDELYDLMY 249

Query: 74  RCFEKDPDKRATAGELLED 92
            C+  DP  R T  +L E 
Sbjct: 250 SCWRADPKDRPTFTKLREV 268

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 41.9 bits (98), Expect = 9e-05
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-LSDKAKQF 71
           + Y+ ++DIWSLGC + EMA  + PF        +L +      +P +P++  S++ +Q 
Sbjct: 181 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 240

Query: 72  ILRCFEKDPDKR 83
           +  C   DP+KR
Sbjct: 241 VNMCINPDPEKR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR--VGFHKMHPEIPAELSDKAK 69
           N  Y    D WSLG  + E+ TG+PPF E       +Y   +  +    E P  +   AK
Sbjct: 166 NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL-EFPNYIDKAAK 224

Query: 70  QFILRCFEKDPDKR 83
             I +   ++P++R
Sbjct: 225 DLIKQLLRRNPEER 238

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 13/109 (11%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK---- 67
           N  Y+   D W+LGC + EM  G+ PF +    +  + R    ++  E+  E S+K    
Sbjct: 175 NERYTFSPDWWALGCLLYEMIAGQSPFQQ---RKKKIKREEVERLVKEVQEEYSEKFSPD 231

Query: 68  AKQFILRCFEKDPDKR-----ATAGELLEDPFLADLTATRSSSSGLLSP 111
           A+        KDP +R       A E+ E P    +   R   +G+L P
Sbjct: 232 ARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKR-LEAGMLEP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           YS +AD+WSLG  + E+ T   PF +  S +  + +V + K  P  P  +S   K  +  
Sbjct: 248 YSKKADMWSLGVILYELLTLHRPF-KGPSQREIMQQVLYGKYDP-FPCPVSSGMKALLDP 305

Query: 75  CFEKDPDKRATAGELLEDPFL 95
              K+P  R T  +LL   FL
Sbjct: 306 LLSKNPALRPTTQQLLHTEFL 326

Length = 478

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 32/121 (26%)

Query: 4   IFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSP-QAALY 49
           I L        Y+   DIWS+GC + EM + +P F               LG+P Q  L 
Sbjct: 180 IMLNS----KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN 235

Query: 50  RVGFHK---------MHPEIP-AELSDKAKQFILRCFEK----DPDKRATAGELLEDPFL 95
            +   +           P++P  +L   A    L   +K    +P KR T  E L  P+L
Sbjct: 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYL 295

Query: 96  A 96
            
Sbjct: 296 E 296

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 54/141 (38%)

Query: 5   FLTQYSVN------------SSYSPQADIWSLGCTIVEMATGKPPF------------IE 40
           F+T+Y V             S Y+   D+WS+GC   E+   KP F             E
Sbjct: 164 FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITE 223

Query: 41  -LGSP-----------QAALY--------RVGFHKMHPEIPA---ELSDKAKQFILRCFE 77
            LGSP           +A  Y        R  F ++ P       +L +K   F      
Sbjct: 224 LLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVF------ 277

Query: 78  KDPDKRATAGELLEDPFLADL 98
            DP KR T  E L  P+LA L
Sbjct: 278 -DPSKRITVEEALAHPYLASL 297

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKA 68
           +  Y    D W+LG  I EM  G PPF +  +P   +Y     G  +     P+  S  A
Sbjct: 172 SKGYGKAVDWWALGILIYEMLAGYPPFFDD-NPI-QIYEKILEGKVRF----PSFFSPDA 225

Query: 69  KQFILRCFEKDPDKR 83
           K  I    + D  KR
Sbjct: 226 KDLIRNLLQVDLTKR 240

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQA--ALYRVGFHKMHPEIPAELSDKAKQF 71
           Y+ Q+D+WS G  + E+ T G  P+  + +P+    L + G ++M  E P   S++    
Sbjct: 206 YTTQSDVWSFGVLLWEIVTLGGNPYPGI-APERLFNLLKTG-YRM--ERPENCSEEMYNL 261

Query: 72  ILRCFEKDPDKRATAGELLED 92
           +L C++++PDKR T  ++ ++
Sbjct: 262 MLTCWKQEPDKRPTFADISKE 282

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 14  SYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           ++S  +D+W  G T+ EM T G+ P+  L   Q  L ++       E P          +
Sbjct: 176 TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-ILKKIDKEGERLERPEACPQDIYNVM 234

Query: 73  LRCFEKDPDKRATAGELLED 92
           L+C+  +P  R T   L E 
Sbjct: 235 LQCWAHNPADRPTFAALREF 254

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 13/109 (11%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK---- 67
           N  Y+   D W LGC I EM  GK PF +    +  + R    +   E   E S+K    
Sbjct: 175 NERYTFSPDWWGLGCLIYEMIEGKSPFRQR---KEKVKREEVERRVKEDQEEYSEKFSEA 231

Query: 68  AKQFILRCFEKDPDKR-----ATAGELLEDPFLADLTATRSSSSGLLSP 111
           A+    +   KDP  R       A E+   PF       R   +G+L P
Sbjct: 232 ARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKR-LEAGMLEP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI-------PAEL 64
           N  Y+   D W LGC I EM  G+ PF      +    +V   ++   +        A+ 
Sbjct: 175 NQRYTLSPDYWGLGCLIYEMIEGQSPF------RGRKEKVKREEVDRRVLETEEVYSAKF 228

Query: 65  SDKAKQFILRCFEKDPDKR-----ATAGELLEDPFLADLTATRSSSSGLLSP 111
           S++AK        KDP +R       AGE+   PF  ++   R   +G+L P
Sbjct: 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKR-LEAGMLDP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 26/106 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F     I+        LG+P   +         Y+  
Sbjct: 178 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237

Query: 53  FHKMHP----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
           F K       ++   L +  +  + +    DP+KR +A   L  PF
Sbjct: 238 FPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N  Y  +AD+W+ GC + +M T +PPF        A   V      P      S+     
Sbjct: 187 NEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE-AVYEPLPEGMYSEDVTDV 245

Query: 72  ILRCFEKDPDKR 83
           I  C   D + R
Sbjct: 246 ITSCLTPDAEAR 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 32/125 (25%), Positives = 43/125 (34%), Gaps = 47/125 (37%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF--IE--------------------LGSPQAALYRVG 52
           Y+   DIW++GC   E+ T +P F   E                    LG+P    +   
Sbjct: 193 YTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDW-PD 251

Query: 53  FHKMHPEIPAELSDKAKQ---------------------FIL--RCFEKDPDKRATAGEL 89
             KM PE    + D   +                     F L  +  E DP KR TA E 
Sbjct: 252 IKKM-PEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEA 310

Query: 90  LEDPF 94
           LE P+
Sbjct: 311 LEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 27/110 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFI---ELGSPQAAL-------------------YRVG 52
           Y+   D+W+ GC   EM TGKP F    EL   Q  L                     V 
Sbjct: 196 YTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVR 255

Query: 53  FHKMHPEIP-----AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD 97
                P  P       ++ +A  F+ +    +P  R TA E L  P+++ 
Sbjct: 256 NDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 7/68 (10%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK----MHPEIPAELSD 66
           + + Y+   D WSLG  + EM  G PPF    +PQ    +V   K      PE+P  +S+
Sbjct: 209 MQTGYNKLCDWWSLGVIMYEMLIGYPPFCS-ETPQETYKKVMNWKETLIFPPEVP--ISE 265

Query: 67  KAKQFILR 74
           KAK  ILR
Sbjct: 266 KAKDLILR 273

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 34/111 (30%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSPQAALY----------- 49
           +YS   DIWS+GC + EM TG+P F               +G+P  + +           
Sbjct: 177 TYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236

Query: 50  ------RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
                      ++ P       D     + R  + +P+ R +A + L+ P+
Sbjct: 237 TFPRYPPQDLQQLFPHADPLGID----LLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 34/112 (30%)

Query: 15  YSPQADIWSLGCTIVEMATGK-----------------------PPFIELGSPQAALYRV 51
           Y+   DIWS+GC + EM TGK                       P F++    +AA   +
Sbjct: 192 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYI 251

Query: 52  GFHKMHPEIPAE--------LSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
              K  P+ P +         S +A   + +  E D DKR TA E LE P+ 
Sbjct: 252 ---KSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF 38
           YS   D+W +GC   EMATG+P F
Sbjct: 181 YSTSLDMWGVGCIFYEMATGRPLF 204

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           +S ++D+WS G T+ E  + G  P+ E+   +         ++    P E   +    +L
Sbjct: 175 FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL--PRPEECPQEIYSIML 232

Query: 74  RCFEKDPDKRATAGEL 89
            C++  P+ R T  EL
Sbjct: 233 SCWKYRPEDRPTFSEL 248

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 27/108 (25%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSPQAALYRV-------- 51
           + YS   DIWS+GC   EM+  +P F               LG+P   ++          
Sbjct: 187 THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWH 246

Query: 52  GFHKMHPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
            F +  P+     +P +LS +    + +    DP KR +A   L  P+
Sbjct: 247 EFPQWKPQDLSRAVP-DLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 30/114 (26%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF------------------------IELGSPQAA 47
             SY+   D+WS+GC + E+   KP F                          +GSP+A 
Sbjct: 184 FQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQ 243

Query: 48  LYRVGFHKMHPEIPAE-----LSDKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
            Y      + P+ P E      +  A   + +    DP KR +  E LE P+LA
Sbjct: 244 NYIRSLPNI-PKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLA 296

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           ++ ++D+WS G  + EMAT  + P+  L + +   + +     H ++P    DK  + + 
Sbjct: 198 FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID--GGHLDLPENCPDKLLELMR 255

Query: 74  RCFEKDPDKRATAGELLE 91
            C++ +P  R T  E++ 
Sbjct: 256 MCWQYNPKMRPTFLEIVS 273

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 39.5 bits (92), Expect = 7e-04
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y+   D WS G  + EM  G+ PF   G  +  L+        P  P  ++ ++K  + +
Sbjct: 173 YTFSVDWWSFGVLLYEMLIGQSPF--HGDDEDELFE-SIRVDTPHYPRWITKESKDILEK 229

Query: 75  CFEKDPDKR-ATAGELLEDPFLADLTATRSSSSGL---LSPEVNLNSKSPEQDRFYLCKK 130
            FE+DP +R    G +   PF   +  T      L     P+V   S     DR +L +K
Sbjct: 230 LFERDPTRRLGVVGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDREFLSEK 289

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 39.1 bits (91), Expect = 8e-04
 Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 13  SSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           S +S ++D+W+ G  + E+ + GK P+    + +         +++   P   S+K    
Sbjct: 176 SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR--PHLASEKVYAI 233

Query: 72  ILRCFEKDPDKRATAGELL 90
           +  C+ +  ++R T  +LL
Sbjct: 234 MYSCWHEKAEERPTFQQLL 252

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y+   D WS G  + EM  G+ PF   G  +  L+    +   P  P  +S +AK  + +
Sbjct: 173 YNESVDWWSFGVLLYEMLIGQSPF--HGEDEDELFDSILNDR-PHFPRWISKEAKDCLSK 229

Query: 75  CFEKDPDKR-ATAGELLEDPF 94
            FE+DP KR    G++ + PF
Sbjct: 230 LFERDPTKRLGVDGDIRQHPF 250

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 45/144 (31%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIEL-----------GSPQAALYRVGF-------- 53
             Y+ ++DI+S+G T  E+ATG+ PF ++           G P + L    F        
Sbjct: 185 YGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMK 244

Query: 54  -------------------------HKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGE 88
                                     ++        S   +  +  C ++DP+KR +A  
Sbjct: 245 NSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASS 304

Query: 89  LLEDPFLADLT-ATRSSSSGLLSP 111
           LL   F   +   T+ S   LL P
Sbjct: 305 LLSHAFFKQVKEQTQGSILSLLPP 328

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 31/112 (27%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF-----------I--ELGSPQAALYRVGFH----- 54
             YS   D+WS+GC   E+ T KP F           I   LG+P   ++  GF      
Sbjct: 182 KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP-GFSELPGA 240

Query: 55  -KMHPEIP-----------AELSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
            K                   LSD     + R    DP KR +A + L+ P+
Sbjct: 241 KKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 33/111 (29%), Positives = 42/111 (37%), Gaps = 28/111 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAAL---------YRVG 52
           YS   DIWS+GC   EM   KP F     I+        LG+P             Y+  
Sbjct: 181 YSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSA 240

Query: 53  FHKMHPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           F K  P+     +P  L       + +    DP KR TA   LE  +  DL
Sbjct: 241 FPKWPPKDLATVVPT-LEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290

Length = 294

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 26/107 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAAL---------YRVG 52
           YS   DIWS+G    EMAT KP F     I+        LG+P   +         Y+  
Sbjct: 179 YSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238

Query: 53  FHKMHPEIPAE----LSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
           F K            L +     + +    DP KR +A + L  P+ 
Sbjct: 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y+   D WS G  + EM  G+ PF   G  +  L++      +P  P  L+ +AK  +++
Sbjct: 173 YNTSVDWWSFGVLLYEMLIGQSPF--HGHDEEELFQ-SIRMDNPCYPRWLTREAKDILVK 229

Query: 75  CFEKDPDKR-ATAGELLEDPFLADL 98
            F ++P++R    G++ + PF  ++
Sbjct: 230 LFVREPERRLGVKGDIRQHPFFREI 254

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH-PEIPAELSDKAKQFI 72
            + P  D W+LG  + E  TG PPF +  +PQ     +    +  PE   +LS  A+  I
Sbjct: 556 PHGPAVDWWALGVCLFEFLTGIPPFND-ETPQQVFQNILNRDIPWPEGEEKLSVNAQNAI 614

Query: 73  LRCFEKDPDKRATAGELLEDPFLADL 98
                 DP KRA   EL + P    +
Sbjct: 615 EILLTMDPTKRAGLKELKQHPLFHGV 640

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQA-ALYRVGFHKMHPEIPAELSDKAKQFI 72
           Y+ Q+D+WS G  + E+ T G  P+  +   +   L + G ++M    P   + +    +
Sbjct: 211 YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-YRMEK--PQNCTQELYHLM 267

Query: 73  LRCFEKDPDKRATAGELLED 92
             C+ + P +R T  +L+ED
Sbjct: 268 RDCWHEVPSQRPTFKQLVED 287

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL-----YRVGFHKMHPEIP-AELSDKA 68
           Y    D WSLGC + E   G PPF    +P         ++    +   + P   LSD+A
Sbjct: 175 YDFTVDYWSLGCMLYEFLCGFPPF-SGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEA 233

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADL 98
              I +       +  +  ++   PF  ++
Sbjct: 234 WDLITKLINDPSRRFGSLEDIKNHPFFKEV 263

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF 38
           +S YS Q D+W +GC   EMA+G+P F
Sbjct: 179 SSEYSTQIDMWGVGCIFFEMASGRPLF 205

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           +Y   AD +SLGC + ++  G  PF +  +            M  E+P   S + +  + 
Sbjct: 172 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 231

Query: 74  RCFEKDPDKR-----ATAGELLEDPFLADL 98
              ++D ++R       A E+ E PF   L
Sbjct: 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF 38
           ++ YS Q D+W +GC   EM+TG+P F
Sbjct: 179 STDYSTQIDMWGVGCIFYEMSTGRPLF 205

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 26/110 (23%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSP-------QAALYR 50
           + S+Y+   D+WS+GC   EM   KP F               +G P          L R
Sbjct: 180 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR 239

Query: 51  VGFHKMHPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
             F    P      +P E+ +   Q +L     +P KR +A   L+ PF 
Sbjct: 240 GAFSPRGPRPVQSVVP-EIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQ 70
           + Y+   D WS+G  + EM  G+PPF+   +P     +V   +    IP  A+LS +A  
Sbjct: 219 TGYTQLCDWWSVGVILYEMLVGQPPFLA-DTPAETQLKVINWETTLHIPSQAKLSREASD 277

Query: 71  FILR-CFEKDPDKR 83
            ILR C     + R
Sbjct: 278 LILRLC--CGAEDR 289

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 43/150 (28%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF-------IEL------------------------ 41
           + YS Q+DIWS+G ++VEMA G+ P        +EL                        
Sbjct: 177 THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR 236

Query: 42  --------GSPQAALYRVGFHKMH---PEIPA-ELSDKAKQFILRCFEKDPDKRATAGEL 89
                     P  A++ +  + ++   P++P+     + + F+ +C  K+P +RA   +L
Sbjct: 237 PLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQL 296

Query: 90  LEDPFLADLTATRSSSSGLLSPEVNLNSKS 119
           +   F+    A     +G L   + LN  S
Sbjct: 297 MVHAFIKRSEAEEVDFAGWLCSTIGLNQPS 326

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 49/143 (34%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV----------------------- 51
           Y  ++DI+S+G T  E+A G  PF ++ + Q  L ++                       
Sbjct: 187 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPS 246

Query: 52  ---------------------GFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELL 90
                                G    HP      S     F+ +C +++PD R +A  LL
Sbjct: 247 RSGANSGLGESTTVSTPRPSNGESSSHPYNRT-FSPHFHHFVEQCLQRNPDARPSASTLL 305

Query: 91  EDPFLADLTATRSSSSGLLSPEV 113
              F   +   R +S  L  PE+
Sbjct: 306 NHSFFKQI--KRRASEAL--PEL 324

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 28/110 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIE-------------LGSPQ-------AALYRVGFH 54
           Y  + DIWS GC   EM  GKP F               LG+P         +   + F 
Sbjct: 183 YDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFV 242

Query: 55  KMHPE---IP-----AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
           +  P+   +P           A   + +    DP KR +A E L  P+LA
Sbjct: 243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA 292

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 38.2 bits (88), Expect = 0.003
 Identities = 13/25 (52%), Positives = 19/25 (76%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPF 38
           SY  ++D+W+LGC I E+ +GK PF
Sbjct: 219 SYDDKSDMWALGCIIYELCSGKTPF 243

Length = 1021

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 32/110 (29%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELG-SPQAALYRV---------------------- 51
           Y P  D+W++GC   E+ TG+P  +  G S    LY +                      
Sbjct: 178 YGPPVDVWAIGCVFAELLTGQP--LWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235

Query: 52  GFHKMHPE--IPAE-----LSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
           G     PE   P E     +S  A  F+  C + DP +R +  ELLE P+
Sbjct: 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 26/109 (23%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPF---------------IELGSPQ-----AALYR 50
           + SSY+   D+WS+GC   EM   KP F               I L   +      AL R
Sbjct: 182 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 241

Query: 51  VGFHKMHPEIPAE-----LSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
             FH      P E     + +  K  +L+C   +P KR +A   L  P+
Sbjct: 242 QAFHS-KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAK 69
           + + Y+   D WS+G  + EM  G+PPF+     +  +  + +   +H    A+LS +A 
Sbjct: 221 LRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEAS 280

Query: 70  QFILRCFEKDPDK--RATAGELLEDPFL 95
             I++      D+  +  A E+   PF 
Sbjct: 281 DLIIKLCRGPEDRLGKNGADEIKAHPFF 308

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 27/107 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKP-------------PFIELGSP-----QAALYRVGFHKM 56
           Y+   DIW +GC   EM T +P              F   G+P            G   +
Sbjct: 204 YTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGV 263

Query: 57  H--PEIPAELSDKAKQ-------FILRCFEKDPDKRATAGELLEDPF 94
           H     P  L ++  +        + +    DP KR TA + LE P+
Sbjct: 264 HSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
KOG4279|consensus	1226		100.0
KOG0033|consensus	355		99.89
KOG0598|consensus	357		99.87
KOG0610|consensus	459		99.86
KOG0605|consensus	550		99.86
KOG0986|consensus	591		99.86
KOG0581|consensus	364		99.85
KOG0616|consensus	355		99.84
KOG0575|consensus	592		99.84
KOG0578|consensus	550		99.84
KOG0694|consensus	694		99.84
KOG0615|consensus	475		99.83
KOG0592|consensus	604		99.82
KOG0604|consensus	400		99.82
KOG0201|consensus	467		99.82
KOG0198|consensus	313		99.81
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.79
KOG0597|consensus	808		99.79
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.78
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.78
KOG0032|consensus	382		99.78
KOG0603|consensus	612		99.77
KOG0583|consensus	370		99.77
KOG0588|consensus	786		99.77
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.77
PTZ00284	467	protein kinase; Provisional	99.76
KOG0599|consensus	411		99.76
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.76
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.76
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.76
PTZ00036	440	glycogen synthase kinase; Provisional	99.76
KOG0696|consensus	683		99.76
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.75
KOG0690|consensus	516		99.75
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.75
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.75
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.75
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.74
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.74
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.74
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.74
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.74
KOG0582|consensus	516		99.74
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.74
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.74
KOG0660|consensus	359		99.74
KOG0596|consensus	677		99.74
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.74
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.73
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.73
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.73
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.73
KOG0614|consensus	732		99.73
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.73
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.73
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.73
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.73
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.73
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.72
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.72
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.72
KOG4721|consensus	904		99.72
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.72
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.72
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.72
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.72
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.72
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.72
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.72
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.72
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.72
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.71
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.71
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.71
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.71
KOG4717|consensus	864		99.71
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.71
KOG0192|consensus	362		99.71
PTZ00283	496	serine/threonine protein kinase; Provisional	99.71
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.71
KOG0591|consensus	375		99.71
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.71
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.71
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.7
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.7
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.7
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.7
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.7
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.7
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.7
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.7
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.7
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.7
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.7
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.7
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.7
PHA02988	283	hypothetical protein; Provisional	99.7
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.7
KOG0579|consensus	1187		99.7
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.7
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.7
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.69
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.69
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.69
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.69
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.69
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.69
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.68
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.68
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.68
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.68
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.68
PTZ00267	478	NIMA-related protein kinase; Provisional	99.68
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.68
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.68
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.68
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.68
KOG0667|consensus	586		99.68
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.68
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.68
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.68
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.68
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.68
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.68
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.68
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.68
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.68
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.67
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.67
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.67
KOG0983|consensus	391		99.67
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.67
PHA03212	391	serine/threonine kinase US3; Provisional	99.67
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.67
KOG0580|consensus	281		99.67
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.67
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.67
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.67
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.67
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.67
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.66
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.66
KOG4645|consensus	1509		99.66
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.66
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.66
PHA03207	392	serine/threonine kinase US3; Provisional	99.66
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.66
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.66
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.66
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.66
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.66
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.66
KOG0593|consensus	396		99.66
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.66
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.66
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.65
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.65
KOG0661|consensus	538		99.65
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.65
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.65
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.65
KOG0695|consensus	593		99.65
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.65
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.65
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.65
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.65
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.65
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.65
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.65
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.65
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.65
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.65
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.65
PHA03209	357	serine/threonine kinase US3; Provisional	99.65
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.65
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.65
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.65
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.65
KOG0589|consensus	426		99.65
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.64
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.64
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.64
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.64
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.64
KOG0612|consensus	1317		99.64
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.64
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.64
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.64
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.64
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.64
KOG0196|consensus	996		99.64
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.64
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.63
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.63
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.63
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.63
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.63
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.63
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.63
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.63
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.63
KOG0197|consensus	468		99.63
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.63
KOG0607|consensus	463		99.62
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.62
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.62
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.62
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.62
KOG0574|consensus	502		99.62
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.62
PLN00181	793	protein SPA1-RELATED; Provisional	99.62
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.62
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.62
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.62
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.62
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.62
KOG0595|consensus	429		99.62
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.61
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.61
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.61
PHA03211	461	serine/threonine kinase US3; Provisional	99.61
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.61
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.61
PLN00009	294	cyclin-dependent kinase A; Provisional	99.61
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.61
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.61
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.61
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.61
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.61
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.61
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.6
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.6
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.6
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.6
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.6
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.6
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.6
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.6
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.6
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.6
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.6
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.59
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.59
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.59
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.59
KOG0659|consensus	318		99.59
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.59
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.59
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.59
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.59
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.59
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.59
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.58
KOG1026|consensus	774		99.58
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.58
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.58
KOG0671|consensus	415		99.58
KOG0585|consensus	576		99.58
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.58
KOG0663|consensus	419		99.58
KOG0658|consensus	364		99.58
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.58
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.58
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.58
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.58
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.58
PHA03210	501	serine/threonine kinase US3; Provisional	99.58
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.58
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.58
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.57
KOG0577|consensus	948		99.57
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.57
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.57
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.57
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.57
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.57
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.57
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.57
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.57
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.57
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.56
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.56
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.56
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.56
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.56
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.56
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.56
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.56
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.56
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.56
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.56
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.55
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.55
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.55
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.55
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.55
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.55
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.55
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.55
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.55
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.54
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.54
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.54
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.54
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.54
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.54
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.54
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.54
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.54
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.54
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.54
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.54
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.54
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.54
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.54
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.54
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.54
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.54
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.53
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.53
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.53
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.53
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.53
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.53
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.52
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.52
KOG2345|consensus	302		99.52
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.52
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.52
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.52
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.51
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.51
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.51
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.51
KOG1290|consensus	590		99.51
KOG1024|consensus	563		99.51
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.51
KOG1095|consensus	1025		99.51
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.5
KOG0584|consensus	632		99.5
PHA02882	294	putative serine/threonine kinase; Provisional	99.5
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.5
KOG0608|consensus	1034		99.5
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.49
KOG0665|consensus	369		99.49
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.49
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.49
KOG0600|consensus	560		99.49
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.49
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.49
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.49
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.48
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.48
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.48
KOG0200|consensus	609		99.47
KOG0193|consensus	678		99.47
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.47
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.47
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.45
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.45
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.45
KOG4236|consensus	888		99.45
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.44
KOG0670|consensus	752		99.44
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.44
KOG0594|consensus	323		99.44
KOG1006|consensus	361		99.44
KOG4257|consensus	974		99.43
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.42
KOG0199|consensus	1039		99.42
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.41
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.39
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.38
KOG1989|consensus	738		99.37
KOG4278|consensus	1157		99.37
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.36
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.36
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.36
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.35
KOG1035|consensus	1351		99.34
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.34
KOG0666|consensus	438		99.32
KOG1151|consensus	775		99.32
KOG0587|consensus	953		99.32
KOG0586|consensus	596		99.31
KOG0606|consensus	1205		99.3
KOG0669|consensus	376		99.29
KOG0611|consensus	668		99.26
KOG1027|consensus	903		99.24
KOG0194|consensus	474		99.19
KOG0603|consensus	612		99.17
KOG1025|consensus	1177		99.13
KOG1094|consensus	807		99.11
KOG0668|consensus	338		99.09
KOG0195|consensus	448		99.08
KOG0662|consensus	292		99.02
KOG0576|consensus	829		99.0
KOG0664|consensus	449		98.98
KOG0590|consensus	601		98.95
KOG1167|consensus	418		98.94
KOG1187|consensus	361		98.94
KOG1033|consensus	516		98.86
KOG0984|consensus	282		98.77
KOG0606|consensus	1205		98.7
KOG4250|consensus	732		98.57
KOG1240|consensus	1431		98.44
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.41
KOG1023|consensus	484		98.24
KOG2052|consensus	513		98.2
KOG0590|consensus	601		98.18
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.11
KOG1345|consensus	378		98.02
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.96
KOG4158|consensus	598		97.94
KOG3653|consensus	534		97.85
KOG2137|consensus	700		96.96
KOG1266|consensus	458		96.6
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	95.27
KOG0601|consensus	524		94.73
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	94.53
KOG1093|consensus	725		94.24
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	94.16
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	93.73
KOG1164|consensus	322		93.56
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	92.78
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	92.3
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	92.01
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	91.87
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	91.39
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	89.38
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	89.07
cd05024	91	S-100A10 S-100A10: A subgroup of the S-100A10 doma	89.03
KOG0044|consensus	193		88.94
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	88.54
cd00213	88	S-100 S-100: S-100 domain, which represents the la	87.23
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	86.38
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	84.44
KOG0034|consensus	187		82.19

>KOG4279|consensus

Probab=100.00  E-value=1.1e-37  Score=264.53  Aligned_cols=222  Identities=40%  Similarity=0.691  Sum_probs=190.8

Q ss_pred             CcceecCcccCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNS--SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~--~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|||||++-.+  +|++++|||||||.+.||.+|+|||.+++.+...+++++..+.+|+.|..++.++++||.+|+.+
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFep  818 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEP  818 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCC
Confidence            6789999988654  69999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCChhhhhcCccccccccccC--------------CCCC-------------------------------------
Q psy14555         79 DPDKRATAGELLEDPFLADLTATRS--------------SSSG-------------------------------------  107 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~~~~--------------~~~~-------------------------------------  107 (222)
                      +|.+||++.+++.+||++.......              .+..                                     
T Consensus       819 d~~~R~sA~~LL~DpFlq~~~kk~r~~ls~~ha~~~e~~rS~S~Ptp~~vs~T~s~~f~~s~sp~~~P~S~~t~~~s~~~  898 (1226)
T KOG4279|consen  819 DPCDRPSAKDLLQDPFLQHNNKKPRPKLSLNHANQREMLRSISHPTPEPVSATLSAGFFSSSSPVSQPSSPITRCTSHGH  898 (1226)
T ss_pred             CcccCccHHHhccCcccccCCCCCCCCCCcccCCChhhccccCCCCCcccccccccCccCCCCCccCCCCCCcccCCCCC
Confidence            9999999999999999975310000              0000                                     


Q ss_pred             ---CCCCCCCC-----CCCCccccccccccccccccchhhhhcccchhHHHHHHHHhhhcccCCcccCHHHHHHHHHHHH
Q psy14555        108 ---LLSPEVNL-----NSKSPEQDRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMR  179 (222)
Q Consensus       108 ---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~i~~l~~~~~  179 (222)
                         +..|....     .++......+|...++++++.++..++..+.+.+..+|...+.+..+...+-+.+++.++.+++
T Consensus       899 vs~ir~p~e~~~~s~~~s~ee~~S~~fmL~kdseRRasl~~~l~~e~d~i~~sl~tsl~q~se~~~l~r~~~e~llr~l~  978 (1226)
T KOG4279|consen  899 VSPIRSPLESALHSRPISPEESSSGFFMLQKDSERRASLGQFLQDEKDLIIDSLSTSLIQQSETELLVRVHMEMLLRGLR  978 (1226)
T ss_pred             cCCCCCcccchhhcCCCChhhcCCcceeeechhHHHHHHHHHhccchhhhhHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence               00000000     0011113468899999999999999999999999999998888888889999999999999999


Q ss_pred             HhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcccccCC
Q psy14555        180 DNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHEAK  222 (222)
Q Consensus       180 ~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~~~~  222 (222)
                      .++...|+.++++.+++|+..||.|++||.|++++||||+|||
T Consensus       979 ~~v~~~d~~kia~~l~~lkg~ld~d~~~ia~~~~~lf~f~DaV 1021 (1226)
T KOG4279|consen  979 DFVLKKDRTKIAKMLDDLKGLLDADTAGIAQINLALFHFSDAV 1021 (1226)
T ss_pred             HHHhcccHHHHHHHHHHHhhhccccccchhhhhhhhccchHHH
Confidence            9999999999999999999999999999999999999999997

>KOG0033|consensus

Probab=99.89  E-value=1.9e-23  Score=159.02  Aligned_cols=95  Identities=27%  Similarity=0.450  Sum_probs=83.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh---hhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|||||++....|+.++|||++|||||.|+.|.+||++  .....++..   +....+.+.|..+++++++|+.+||.
T Consensus       175 tP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~--~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~  252 (355)
T KOG0033|consen  175 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLT  252 (355)
T ss_pred             CCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC--ccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhc
Confidence            7899999999999999999999999999999999999984  344444333   34556667788999999999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .||++|.|+.++++|||+.+
T Consensus       253 ~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  253 VNPKKRITADEALKHPWICN  272 (355)
T ss_pred             cChhhhccHHHHhCCchhcc
Confidence            99999999999999999975

>KOG0598|consensus

Probab=99.87  E-value=1.2e-22  Score=162.19  Aligned_cols=113  Identities=26%  Similarity=0.434  Sum_probs=94.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+.+|+.+|||||+|+++|+|++|.+||..  .....+............|..++.+++++++++|.++|
T Consensus       188 T~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~--~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp  265 (357)
T KOG0598|consen  188 TPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA--EDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDP  265 (357)
T ss_pred             CccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC--ccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCH
Confidence            7899999999999999999999999999999999999974  33344444444444455566799999999999999999


Q ss_pred             CCCC----ChhhhhcCccccccccccCCCCCCCCCCCCC
Q psy14555         81 DKRA----TAGELLEDPFLADLTATRSSSSGLLSPEVNL  115 (222)
Q Consensus        81 ~~R~----s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~  115 (222)
                      .+|.    ++.++.+||||.+.+|.........+|..+.
T Consensus       266 ~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~  304 (357)
T KOG0598|consen  266 RQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPN  304 (357)
T ss_pred             HHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecC
Confidence            9995    6888999999999999988877777765543

>KOG0610|consensus

Probab=99.86  E-value=6.5e-22  Score=160.06  Aligned_cols=100  Identities=23%  Similarity=0.349  Sum_probs=83.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |=-|+|||++.+.+++.+||||+|||.+|||+.|..||.+.++ .+.+..+......++....++..+++||+++|.+||
T Consensus       298 ThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP  376 (459)
T KOG0610|consen  298 THEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDP  376 (459)
T ss_pred             ccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccCh
Confidence            4569999999999999999999999999999999999987443 344444433333333334788999999999999999


Q ss_pred             CCCCC----hhhhhcCccccccccc
Q psy14555         81 DKRAT----AGELLEDPFLADLTAT  101 (222)
Q Consensus        81 ~~R~s----~~~~l~h~~~~~~~~~  101 (222)
                      .+|..    +++|.+||||++.+|.
T Consensus       377 ~kRlg~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  377 SKRLGSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             hhhhccccchHHhhcCccccCCChh
Confidence            99987    9999999999999987

>KOG0605|consensus

Probab=99.86  E-value=6e-22  Score=164.67  Aligned_cols=103  Identities=28%  Similarity=0.472  Sum_probs=83.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hcc--CCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHK--MHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+=|||||++.+.+|+..|||||+|||+||||.|.|||..  +.....++.+ .-.  ...+.....++++++||.+|+.
T Consensus       351 TPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s--~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~  428 (550)
T KOG0605|consen  351 TPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCS--ETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC  428 (550)
T ss_pred             CccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc
Confidence            7889999999999999999999999999999999999974  3333333332 122  2223334578999999999999


Q ss_pred             cCCCCCC---ChhhhhcCccccccccccCCCC
Q psy14555         78 KDPDKRA---TAGELLEDPFLADLTATRSSSS  106 (222)
Q Consensus        78 ~~p~~R~---s~~~~l~h~~~~~~~~~~~~~~  106 (222)
                       ||.+|.   ++.+|..||||++..|......
T Consensus       429 -d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~  459 (550)
T KOG0605|consen  429 -DPENRLGSKGAEEIKKHPFFKGVDWDHLREM  459 (550)
T ss_pred             -CHHHhcCcccHHHHhcCCccccCCcchhhcC
Confidence             999996   5899999999999998876554

>KOG0986|consensus

Probab=99.86  E-value=4.6e-22  Score=162.66  Aligned_cols=165  Identities=23%  Similarity=0.224  Sum_probs=122.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH-HHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA-LYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|||||++.+..|+.++||||+||++|||+.|..||......... -...........++..+|++++++...+|++|
T Consensus       349 T~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kd  428 (591)
T KOG0986|consen  349 TVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKD  428 (591)
T ss_pred             cccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccC
Confidence            78999999999999999999999999999999999999743221111 11122334445667889999999999999999


Q ss_pred             CCCCCC-----hhhhhcCccccccccccCCCCCCCCCCCCCCCCCccccccccccccccccchhhhhcccchhHHHHHHH
Q psy14555         80 PDKRAT-----AGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRITLSGVLDQDRDHICQVWL  154 (222)
Q Consensus        80 p~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (222)
                      |.+|..     ++++..||||+..+|.........+|..+.....-        .++-......+.+.........+.+.
T Consensus       429 p~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aVy--------akDv~DIeqFs~VKGV~ld~~D~~fy  500 (591)
T KOG0986|consen  429 PEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAVY--------AKDVLDIEQFSTVKGVKLDDTDTDFY  500 (591)
T ss_pred             HHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCccccc--------hhhhhhhhhcccccceecccccHHHH
Confidence            999974     56899999999999999988888888776554322        22222222233333334444445677


Q ss_pred             HhhhcccCCcccCHHHHHH
Q psy14555        155 KCIQRDVDDCLLSKAHLEI  173 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~  173 (222)
                      +.+.++..++.+.+|.+++
T Consensus       501 ~~F~tg~vsipWQnE~~ET  519 (591)
T KOG0986|consen  501 KNFATGSVSIPWQNEMIET  519 (591)
T ss_pred             HhccCCcccchHHHHHHHh
Confidence            7888888899998887777

>KOG0581|consensus

Probab=99.85  E-value=1.5e-21  Score=156.04  Aligned_cols=98  Identities=29%  Similarity=0.542  Sum_probs=84.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---ChHHHHHHhhhccCCCCCCcc-ccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELG---SPQAALYRVGFHKMHPEIPAE-LSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l   76 (222)
                      |..|||||.+.+..|+.++||||||++++|+..|+.||....   .....+...+....++..|.. +|+++.+|+..||
T Consensus       240 T~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL  319 (364)
T KOG0581|consen  240 TSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCL  319 (364)
T ss_pred             cccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHh
Confidence            788999999999999999999999999999999999997531   123344444556677788876 9999999999999


Q ss_pred             ccCCCCCCChhhhhcCcccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ++||.+|+++.++++|||++..
T Consensus       320 ~Kdp~~R~s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  320 RKDPSERPSAKQLLQHPFIKKF  341 (364)
T ss_pred             cCCcccCCCHHHHhcCHHHhhc
Confidence            9999999999999999999864

>KOG0616|consensus

Probab=99.84  E-value=2.4e-21  Score=150.91  Aligned_cols=113  Identities=21%  Similarity=0.356  Sum_probs=94.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+-|+|||++...+|+.++|||||||++|||++|.+||... ++ ..++..+ ......+|..++.++++|++++|+.|-
T Consensus       204 TPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~-~~-~~iY~KI-~~~~v~fP~~fs~~~kdLl~~LL~vD~  280 (355)
T KOG0616|consen  204 TPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD-NP-IQIYEKI-LEGKVKFPSYFSSDAKDLLKKLLQVDL  280 (355)
T ss_pred             CccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC-Ch-HHHHHHH-HhCcccCCcccCHHHHHHHHHHHhhhh
Confidence            78999999999999999999999999999999999999753 23 3333332 233456788999999999999999999


Q ss_pred             CCC-----CChhhhhcCccccccccccCCCCCCCCCCCCCC
Q psy14555         81 DKR-----ATAGELLEDPFLADLTATRSSSSGLLSPEVNLN  116 (222)
Q Consensus        81 ~~R-----~s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~  116 (222)
                      .+|     ....++..||||++..|.......+.+|..++.
T Consensus       281 t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~  321 (355)
T KOG0616|consen  281 TKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPN  321 (355)
T ss_pred             HhhhcCcCCCccccccCcccccccHHHHhhccccCCCCCcc
Confidence            999     367899999999999998888887777776633

>KOG0575|consensus

Probab=99.84  E-value=3.9e-21  Score=161.96  Aligned_cols=94  Identities=28%  Similarity=0.527  Sum_probs=80.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+-|+|||++...+|+..|||||+|||+|.||.|+|||..  ..-...+.. +.......|..++.++++||.++|..+|
T Consensus       181 TPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet--k~vkety~~-Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P  257 (592)
T KOG0575|consen  181 TPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET--KTVKETYNK-IKLNEYSMPSHLSAEAKDLIRKLLRPNP  257 (592)
T ss_pred             CCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc--chHHHHHHH-HHhcCcccccccCHHHHHHHHHHhcCCc
Confidence            7889999999999999999999999999999999999953  222333332 3344556677899999999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+||++++++.|+||+.
T Consensus       258 ~~Rpsl~~vL~h~Ff~~  274 (592)
T KOG0575|consen  258 SERPSLDEVLDHPFFKS  274 (592)
T ss_pred             ccCCCHHHHhcCHhhhC
Confidence            99999999999999954

>KOG0578|consensus

Probab=99.84  E-value=3e-21  Score=161.46  Aligned_cols=96  Identities=36%  Similarity=0.663  Sum_probs=82.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |++|||||++....|++++||||||+++.||+-|.|||.. ..+...++.+... ......+..+|..+++|+.+||+.|
T Consensus       432 TPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln-E~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~d  510 (550)
T KOG0578|consen  432 TPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVD  510 (550)
T ss_pred             CCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC-CChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcc
Confidence            8999999999999999999999999999999999999964 3444445544333 3334567889999999999999999


Q ss_pred             CCCCCChhhhhcCccccc
Q psy14555         80 PDKRATAGELLEDPFLAD   97 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~   97 (222)
                      +.+|+++.++|.||||+.
T Consensus       511 v~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  511 VEQRASAKELLEHPFLKM  528 (550)
T ss_pred             hhcCCCHHHHhcChhhhh
Confidence            999999999999999964

>KOG0694|consensus

Probab=99.84  E-value=5.3e-21  Score=163.08  Aligned_cols=111  Identities=23%  Similarity=0.374  Sum_probs=95.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+-|||||++.+..|+.+||||||||+|||||.|.+||++  +..++++..+ ....+.+|..+|.++.++++++|.++|
T Consensus       531 Tpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g--ddEee~FdsI-~~d~~~yP~~ls~ea~~il~~ll~k~p  607 (694)
T KOG0694|consen  531 TPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG--DDEEEVFDSI-VNDEVRYPRFLSKEAIAIMRRLLRKNP  607 (694)
T ss_pred             ChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC--CCHHHHHHHH-hcCCCCCCCcccHHHHHHHHHHhccCc
Confidence            7899999999999999999999999999999999999984  4455555443 344566788999999999999999999


Q ss_pred             CCCCC-----hhhhhcCccccccccccCCCCCCCCCCCC
Q psy14555         81 DKRAT-----AGELLEDPFLADLTATRSSSSGLLSPEVN  114 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~~~~  114 (222)
                      .+|..     +.++..||||+..+|.......+.+|..+
T Consensus       608 ~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P  646 (694)
T KOG0694|consen  608 EKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVP  646 (694)
T ss_pred             ccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCc
Confidence            99975     57899999999999988877777776544

>KOG0615|consensus

Probab=99.83  E-value=6.1e-22  Score=160.12  Aligned_cols=98  Identities=26%  Similarity=0.400  Sum_probs=82.3

Q ss_pred             CcceecCcccCCCCC---CchhhHHHHHHHHHHHHhCCCCCCCCCChH--HHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSY---SPQADIWSLGCTIVEMATGKPPFIELGSPQ--AALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y---~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||++.+.++   +.+||+||+||++|.+++|.+||.+.....  ......+...+.+..|..+++++.+||..|
T Consensus       341 TpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~m  420 (475)
T KOG0615|consen  341 TPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWM  420 (475)
T ss_pred             CccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHh
Confidence            899999999988864   447899999999999999999998543332  223334556666778899999999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |..||.+||++.++|+||||+..
T Consensus       421 L~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  421 LVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             hEeCcccCcCHHHHhcChhhhcc
Confidence            99999999999999999999864

>KOG0592|consensus

Probab=99.82  E-value=1.4e-20  Score=156.87  Aligned_cols=99  Identities=22%  Similarity=0.530  Sum_probs=86.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|++||.+..+.-++.+|+|+||||+|.|+.|.|||...  ..-.++.. +......+|..+++.+.+|++++|..||
T Consensus       250 TAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~--NeyliFqk-I~~l~y~fp~~fp~~a~dLv~KLLv~dp  326 (604)
T KOG0592|consen  250 TAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA--NEYLIFQK-IQALDYEFPEGFPEDARDLIKKLLVRDP  326 (604)
T ss_pred             eecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc--cHHHHHHH-HHHhcccCCCCCCHHHHHHHHHHHccCc
Confidence            88999999999999999999999999999999999999743  22333332 4455667788999999999999999999


Q ss_pred             CCCCChhhhhcCcccccccccc
Q psy14555         81 DKRATAGELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~~~~~  102 (222)
                      ++|+++.+|.+||||.+.+|..
T Consensus       327 ~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  327 SDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             cccccHHHHhhCcccccCChhh
Confidence            9999999999999999988876

>KOG0604|consensus

Probab=99.82  E-value=6.5e-21  Score=148.85  Aligned_cols=98  Identities=21%  Similarity=0.370  Sum_probs=83.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS-----PQAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |++|+|||++...+|+..+|+||+||++|.|++|.|||.....     ......+.+...++.+.|.++|+.++++|+++
T Consensus       226 TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~L  305 (400)
T KOG0604|consen  226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKL  305 (400)
T ss_pred             cccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999974221     11223344556677777889999999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |..+|.+|.++.+++.|||+.+.
T Consensus       306 Lkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  306 LKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             hcCCchhheeHHHhhcCchhccc
Confidence            99999999999999999999763

>KOG0201|consensus

Probab=99.82  E-value=4.1e-21  Score=156.38  Aligned_cols=96  Identities=30%  Similarity=0.541  Sum_probs=80.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+.+|+.++||||+|++.+||++|.||+.....  ......+-...+|.+...+++.+++|+..||.++|
T Consensus       174 TPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP--mrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P  251 (467)
T KOG0201|consen  174 TPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP--MRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNP  251 (467)
T ss_pred             cccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc--ceEEEeccCCCCCccccccCHHHHHHHHHHhhcCc
Confidence            8999999999999999999999999999999999999976543  11111122344455556889999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      ..||+|.++++|+|++..
T Consensus       252 ~~RpsA~~LLKh~FIk~a  269 (467)
T KOG0201|consen  252 EFRPSAKELLKHKFIKRA  269 (467)
T ss_pred             ccCcCHHHHhhhHHHHhc
Confidence            999999999999999863

>KOG0198|consensus

Probab=99.81  E-value=7.9e-21  Score=152.99  Aligned_cols=98  Identities=47%  Similarity=0.787  Sum_probs=82.4

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++..+.. +.++||||+||++.||++|++||.........+...+.....|.+|..++.++++|+.+|+..+
T Consensus       184 tp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~  263 (313)
T KOG0198|consen  184 TPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRD  263 (313)
T ss_pred             CccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcC
Confidence            789999999997333 3499999999999999999999975323344455555555667889999999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||||++++.|||.+..
T Consensus       264 p~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  264 PEKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             cccCcCHHHHhhChhhhcc
Confidence            9999999999999999764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.79  E-value=6.5e-20  Score=137.55  Aligned_cols=96  Identities=23%  Similarity=0.250  Sum_probs=71.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh--hccCCC---CCCccccH--HHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG--FHKMHP---EIPAELSD--KAKQFIL   73 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~--~~~~li~   73 (222)
                      |..|||||++.+..|+.++||||+||++|||++|..||..............  .....+   ..+..++.  .+++++.
T Consensus        67 ~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  146 (176)
T smart00750       67 DPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMR  146 (176)
T ss_pred             cccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHH
Confidence            6789999999999999999999999999999999999964322111111111  111100   11233344  6899999


Q ss_pred             HhcccCCCCCCChhhhhcCcccc
Q psy14555         74 RCFEKDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        74 ~~l~~~p~~R~s~~~~l~h~~~~   96 (222)
                      +||..+|.+||++.+++.|+|+.
T Consensus       147 ~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      147 VCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHhcccccccCHHHHHHHHHHH
Confidence            99999999999999999999875

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0597|consensus

Probab=99.79  E-value=9.5e-20  Score=152.79  Aligned_cols=95  Identities=27%  Similarity=0.480  Sum_probs=81.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |++|||||.+.++.|+..+|.||+||++||+..|+|||..  ..-..+. ..+...+..+|...+..+.+|+.++|.+||
T Consensus       163 tPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a--~si~~Lv-~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP  239 (808)
T KOG0597|consen  163 TPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA--RSITQLV-KSILKDPVKPPSTASSSFVNFLQGLLIKDP  239 (808)
T ss_pred             cccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH--HHHHHHH-HHHhcCCCCCcccccHHHHHHHHHHhhcCh
Confidence            8999999999999999999999999999999999999952  2222222 234455666778899999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      ..|.++.+++.|||.++.
T Consensus       240 ~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  240 AQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             hhcccHHHHhcChHHhhh
Confidence            999999999999998763

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.78  E-value=2.9e-19  Score=144.11  Aligned_cols=108  Identities=22%  Similarity=0.344  Sum_probs=83.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH-HHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA-ALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||++.+..|+.++||||+||++|+|++|+.||........ ..............+..++..+.+|+.+||..+
T Consensus       164 ~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~  243 (285)
T cd05631         164 TVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKN  243 (285)
T ss_pred             CCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcC
Confidence            5689999999999999999999999999999999999975322111 111111222333456678999999999999999


Q ss_pred             CCCCCC-----hhhhhcCccccccccccCCCCCC
Q psy14555         80 PDKRAT-----AGELLEDPFLADLTATRSSSSGL  108 (222)
Q Consensus        80 p~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~  108 (222)
                      |.+|++     ++++++||||.+.++........
T Consensus       244 P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~  277 (285)
T cd05631         244 PKERLGCRGNGAAGVKQHPIFKNINFKRLEANML  277 (285)
T ss_pred             HHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcC
Confidence            999987     89999999999876655444333

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=3.2e-19  Score=144.33  Aligned_cols=102  Identities=21%  Similarity=0.302  Sum_probs=81.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..++.++||||+||++|+|++|..||...  .......... ......+..++..+++|+++||..||
T Consensus       161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~--~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD--NPFGIYEKIL-AGKLEFPRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHH-hCCcCCCccCCHHHHHHHHHHcCCCH
Confidence            56899999999999999999999999999999999999743  2222222211 22334566679999999999999999


Q ss_pred             CCCCC-----hhhhhcCccccccccccCCC
Q psy14555         81 DKRAT-----AGELLEDPFLADLTATRSSS  105 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~~~~~  105 (222)
                      .+|++     +.+++.||||....+.....
T Consensus       238 ~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~  267 (291)
T cd05612         238 TRRLGNMKNGADDVKNHRWFKSVDWDDVPQ  267 (291)
T ss_pred             HHccCCccCCHHHHhcCccccCCCHHHHhc
Confidence            99995     99999999998766654333

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0032|consensus

Probab=99.78  E-value=6.5e-19  Score=146.64  Aligned_cols=97  Identities=26%  Similarity=0.457  Sum_probs=81.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh--hhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++....|+..+|+||+||++|.|++|.+||.+.... .....+  +...+..+.|..++..+++|+.+|+..
T Consensus       201 tp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~-~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~  279 (382)
T KOG0032|consen  201 TPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF-EIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEF  279 (382)
T ss_pred             CccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh-HHHHHHHcCCCCCCCCCccccCHHHHHHHHHhccc
Confidence            78999999999999999999999999999999999999854322 222222  233455666788899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||.+|+++.+++.|||+...
T Consensus       280 dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  280 DPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             CcccCCCHHHHhcCccccCC
Confidence            99999999999999998753

>KOG0603|consensus

Probab=99.77  E-value=4.1e-19  Score=150.66  Aligned_cols=91  Identities=25%  Similarity=0.388  Sum_probs=75.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|.|||++....|+++|||||+|++||+||+|..||.......+...++.    .+.....+|..+++|+..||+.+|
T Consensus       476 t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~----~~~~s~~vS~~AKdLl~~LL~~dP  551 (612)
T KOG0603|consen  476 TLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ----MPKFSECVSDEAKDLLQQLLQVDP  551 (612)
T ss_pred             hhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc----CCccccccCHHHHHHHHHhccCCh
Confidence            6789999999999999999999999999999999999974322212222222    122237899999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+|+++.++..|||+
T Consensus       552 ~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  552 ALRLGADEIGAHPWF  566 (612)
T ss_pred             hhCcChhhhccCcch
Confidence            999999999999999

>KOG0583|consensus

Probab=99.77  E-value=5.8e-19  Score=146.76  Aligned_cols=94  Identities=32%  Similarity=0.501  Sum_probs=79.5

Q ss_pred             CcceecCcccCCCC-CC-chhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccc-cHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSS-YS-PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAEL-SDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~-y~-~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~   77 (222)
                      |+.|+|||++.+.. |. .++||||+||+||.|++|..||..  ......+.. ........|..+ |.++++|+.+||.
T Consensus       184 sp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d--~~~~~l~~k-i~~~~~~~p~~~~S~~~~~Li~~mL~  260 (370)
T KOG0583|consen  184 SPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD--SNVPNLYRK-IRKGEFKIPSYLLSPEARSLIEKMLV  260 (370)
T ss_pred             CcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC--ccHHHHHHH-HhcCCccCCCCcCCHHHHHHHHHHcC
Confidence            78999999999988 86 789999999999999999999974  222233333 344455667777 9999999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+|.+|+++.+++.||||+.
T Consensus       261 ~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  261 PDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CCcccCCCHHHHhhChhhcc
Confidence            99999999999999999986

>KOG0588|consensus

Probab=99.77  E-value=5.6e-19  Score=150.37  Aligned_cols=97  Identities=28%  Similarity=0.519  Sum_probs=81.0

Q ss_pred             cceecCcccCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYS-PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~-~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      +-|-|||++.+..|. .++||||||||||.||+|+.||.. ++....+.++  ..-.+..|..++.++.+|+.+||..||
T Consensus       175 PHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-dNir~LLlKV--~~G~f~MPs~Is~eaQdLLr~ml~VDp  251 (786)
T KOG0588|consen  175 PHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-DNIRVLLLKV--QRGVFEMPSNISSEAQDLLRRMLDVDP  251 (786)
T ss_pred             cccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-ccHHHHHHHH--HcCcccCCCcCCHHHHHHHHHHhccCc
Confidence            569999999999995 699999999999999999999963 3333333333  333456788999999999999999999


Q ss_pred             CCCCChhhhhcCccccccccc
Q psy14555         81 DKRATAGELLEDPFLADLTAT  101 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~~~~  101 (222)
                      .+|.|.++++.|||+.+....
T Consensus       252 ~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  252 STRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             cccccHHHHhhCchhhcCCCC
Confidence            999999999999999876543

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.77  E-value=3.5e-19  Score=146.23  Aligned_cols=101  Identities=25%  Similarity=0.440  Sum_probs=82.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++|..||...  .......... ......|..++..+.+|+.+||..+|
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~~~~~~~~~-~~~~~~p~~~~~~~~~li~~~L~~dP  234 (323)
T cd05571         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELIL-MEEIRFPRTLSPEAKSLLAGLLKKDP  234 (323)
T ss_pred             CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC--CHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHccCCH
Confidence            67899999999999999999999999999999999999642  2223222222 22345567789999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSS  104 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~  104 (222)
                      .+|+     ++.+++.||||....+....
T Consensus       235 ~~R~~~~~~~~~~ll~h~~f~~~~~~~~~  263 (323)
T cd05571         235 KQRLGGGPEDAKEIMEHRFFASINWQDVV  263 (323)
T ss_pred             HHcCCCCCCCHHHHHcCCCcCCCCHHHHH
Confidence            9999     89999999999987655443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00284 protein kinase; Provisional

Probab=99.76  E-value=6.1e-19  Score=151.76  Aligned_cols=97  Identities=21%  Similarity=0.286  Sum_probs=71.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhcc-CC---------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHK-MH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~-~~---------------------   57 (222)
                      |..|+|||++.+..|+.++||||+||++|||++|++||...... ..+... ...+ .+                     
T Consensus       308 t~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  386 (467)
T PTZ00284        308 TRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL-EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ  386 (467)
T ss_pred             CccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence            67899999999999999999999999999999999999753321 111110 0000 00                     


Q ss_pred             --CC-CC--------------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         58 --PE-IP--------------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        58 --~~-~~--------------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                        +. .+              ......+.+||.+||..||.+||++++++.||||...
T Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence              00 00              0113557799999999999999999999999999864

>KOG0599|consensus

Probab=99.76  E-value=4.7e-19  Score=137.12  Aligned_cols=97  Identities=28%  Similarity=0.445  Sum_probs=81.0

Q ss_pred             CcceecCcccCC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh---hhccCCCCCCccccHHHHHH
Q psy14555          1 MNVIFLTQYSVN------SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIPAELSDKAKQF   71 (222)
Q Consensus         1 t~~y~aPe~~~~------~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l   71 (222)
                      |+.|+|||.+..      .+|+..+|.|++|||+|.|+.|.+||++.  ....+.+.   +...+..+.|.+.+..+++|
T Consensus       185 TPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--kQmlMLR~ImeGkyqF~speWadis~~~KdL  262 (411)
T KOG0599|consen  185 TPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--KQMLMLRMIMEGKYQFRSPEWADISATVKDL  262 (411)
T ss_pred             CCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--HHHHHHHHHHhcccccCCcchhhccccHHHH
Confidence            899999997664      36889999999999999999999999853  33333333   34455667788999999999


Q ss_pred             HHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         72 ILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        72 i~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      |.+||+.||.+|.|+++++.||||.+..
T Consensus       263 IsrlLqVdp~~Ritake~LaHpff~q~~  290 (411)
T KOG0599|consen  263 ISRLLQVDPTKRITAKEALAHPFFIQIA  290 (411)
T ss_pred             HHHHHeeCchhcccHHHHhcChHHHHHH
Confidence            9999999999999999999999996543

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.76  E-value=1.6e-18  Score=139.64  Aligned_cols=94  Identities=18%  Similarity=0.327  Sum_probs=71.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-cc------------------CCC---
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HK------------------MHP---   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~------------------~~~---   58 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|++||...... ........ .+                  ...   
T Consensus       164 ~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (287)
T cd07848         164 TRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-DQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAV  242 (287)
T ss_pred             ccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhCCCCHHHHHhhhccchhcccccCcc
Confidence            56799999999999999999999999999999999999753221 11111100 00                  000   


Q ss_pred             --------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 --------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 --------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                              .....++..+.+|+++||..+|.+||+++++++||||
T Consensus       243 ~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         243 NHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                    0112367889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.76  E-value=8.2e-19  Score=144.42  Aligned_cols=99  Identities=15%  Similarity=0.330  Sum_probs=79.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..++.++||||+||++|+|++|..||...  .......... ......|..++..+++|+.+||..||
T Consensus       178 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--~~~~~~~~i~-~~~~~~p~~~~~~~~~li~~~L~~dP  254 (329)
T PTZ00263        178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD--TPFRIYEKIL-AGRLKFPNWFDGRARDLVKGLLQTDH  254 (329)
T ss_pred             ChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC--CHHHHHHHHh-cCCcCCCCCCCHHHHHHHHHHhhcCH
Confidence            56799999999999999999999999999999999999642  2222222222 22344566789999999999999999


Q ss_pred             CCCCC-----hhhhhcCcccccccccc
Q psy14555         81 DKRAT-----AGELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~~  102 (222)
                      .+|++     +++++.||||.+..+..
T Consensus       255 ~~R~~~~~~~~~~ll~hp~f~~~~~~~  281 (329)
T PTZ00263        255 TKRLGTLKGGVADVKNHPYFHGANWDK  281 (329)
T ss_pred             HHcCCCCCCCHHHHhcCCccCCCCHHH
Confidence            99986     79999999998865553

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.76  E-value=1.4e-18  Score=142.60  Aligned_cols=99  Identities=22%  Similarity=0.393  Sum_probs=80.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++|..||...  .......... ......|..++.++.+++.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~--~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~L~~dP  235 (320)
T cd05590         159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE--NEDDLFEAIL-NDEVVYPTWLSQDAVDILKAFMTKNP  235 (320)
T ss_pred             CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHcccCH
Confidence            57899999999999999999999999999999999999743  2233222222 22334456689999999999999999


Q ss_pred             CCCCCh------hhhhcCcccccccccc
Q psy14555         81 DKRATA------GELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s~------~~~l~h~~~~~~~~~~  102 (222)
                      .+|+++      .+++.||||....+..
T Consensus       236 ~~R~~~~~~~~~~~~~~h~~f~~~~~~~  263 (320)
T cd05590         236 TMRLGSLTLGGEEAILRHPFFKELDWEK  263 (320)
T ss_pred             HHCCCCCCCCCHHHHHcCCCcCCCCHHH
Confidence            999998      8899999998766543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.76  E-value=2.1e-18  Score=147.26  Aligned_cols=98  Identities=32%  Similarity=0.499  Sum_probs=73.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hcc------------------CC---
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHK------------------MH---   57 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~------------------~~---   57 (222)
                      |+.|+|||++.+ ..|+.++||||+||++|||++|.+||.+.... ..+.... ..+                  .+   
T Consensus       233 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~  311 (440)
T PTZ00036        233 SRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVK  311 (440)
T ss_pred             CcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhchhhhcccCCccC
Confidence            567999998765 47999999999999999999999999753322 2111110 000                  00   


Q ss_pred             -----CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         58 -----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        58 -----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                           ..+|...+.++.+|+.+||..+|.+|+++.+++.||||....
T Consensus       312 ~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        312 PKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             chhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence                 012334678999999999999999999999999999998653

>KOG0696|consensus

Probab=99.76  E-value=1.7e-18  Score=140.79  Aligned_cols=112  Identities=21%  Similarity=0.352  Sum_probs=92.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+-|+|||.+....|+.++||||+||+||||+.|.+||.+  ....+++..+ ......+|..+|.++.++++.+|.+.|
T Consensus       513 TPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG--eDE~elF~aI-~ehnvsyPKslSkEAv~ickg~ltK~P  589 (683)
T KOG0696|consen  513 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG--EDEDELFQAI-MEHNVSYPKSLSKEAVAICKGLLTKHP  589 (683)
T ss_pred             CCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC--CCHHHHHHHH-HHccCcCcccccHHHHHHHHHHhhcCC
Confidence            7889999999999999999999999999999999999974  3444444432 233445688899999999999999999


Q ss_pred             CCCCCh-----hhhhcCccccccccccCCCCCCCCCCCCC
Q psy14555         81 DKRATA-----GELLEDPFLADLTATRSSSSGLLSPEVNL  115 (222)
Q Consensus        81 ~~R~s~-----~~~l~h~~~~~~~~~~~~~~~~~~~~~~~  115 (222)
                      .+|..+     .++..||||+...|.......+.+|..+.
T Consensus       590 ~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk  629 (683)
T KOG0696|consen  590 GKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPK  629 (683)
T ss_pred             ccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCc
Confidence            999754     57999999999999887777776665543

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.75  E-value=2.1e-18  Score=138.76  Aligned_cols=102  Identities=23%  Similarity=0.339  Sum_probs=79.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH-HHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA-ALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|+.||........ ..............+..++..+.+++.+||..+
T Consensus       160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  239 (280)
T cd05608         160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKD  239 (280)
T ss_pred             CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCC
Confidence            5689999999999999999999999999999999999964322111 111111122233445678999999999999999


Q ss_pred             CCCCC-----ChhhhhcCcccccccccc
Q psy14555         80 PDKRA-----TAGELLEDPFLADLTATR  102 (222)
Q Consensus        80 p~~R~-----s~~~~l~h~~~~~~~~~~  102 (222)
                      |.+|+     +++++++||||++..+..
T Consensus       240 P~~R~~~~~~~~~~~l~h~~~~~~~~~~  267 (280)
T cd05608         240 PEKRLGFRDGNCDGLRTHPLFRDLNWRQ  267 (280)
T ss_pred             HHHhcCCCCCCHHHHhcChhhhcCCHhH
Confidence            99999     778999999998865554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0690|consensus

Probab=99.75  E-value=7.5e-19  Score=138.99  Aligned_cols=112  Identities=22%  Similarity=0.391  Sum_probs=93.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+-|+|||++....|+-++|||.+||++|||++|+.||..  .....++.. +......+|..++++++.|+..+|.++|
T Consensus       331 TPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn--~dh~kLFeL-Il~ed~kFPr~ls~eAktLLsGLL~kdP  407 (516)
T KOG0690|consen  331 TPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN--KDHEKLFEL-ILMEDLKFPRTLSPEAKTLLSGLLKKDP  407 (516)
T ss_pred             ChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc--cchhHHHHH-HHhhhccCCccCCHHHHHHHHHHhhcCh
Confidence            7889999999999999999999999999999999999963  233333332 2234456788999999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCCCCCCCCCCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSSSGLLSPEVNL  115 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~  115 (222)
                      ++|.     .+.++++|+||...+|.......+.+|..+.
T Consensus       408 ~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPq  447 (516)
T KOG0690|consen  408 KKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQ  447 (516)
T ss_pred             HhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCC
Confidence            9996     5789999999999999887777776665544

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.75  E-value=8e-19  Score=145.18  Aligned_cols=102  Identities=22%  Similarity=0.319  Sum_probs=81.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|.+||...  .......... ......|..++..+.+++++||..+|
T Consensus       191 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~~~~~~~li~~~l~~dp  267 (340)
T PTZ00426        191 TPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN--EPLLIYQKIL-EGIIYFPKFLDNNCKHLMKKLLSHDL  267 (340)
T ss_pred             ChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCC--CHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHcccCH
Confidence            56899999999999999999999999999999999999742  2222222222 22234566789999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSS  105 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~  105 (222)
                      .+|+     ++++++.||||.+..|.....
T Consensus       268 ~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~  297 (340)
T PTZ00426        268 TKRYGNLKKGAQNVKEHPWFGNIDWVSLLH  297 (340)
T ss_pred             HHcCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence            9995     899999999999876654333

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.5e-18  Score=141.85  Aligned_cols=98  Identities=26%  Similarity=0.493  Sum_probs=79.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++|.+||...  ......... .......|..++..+.+|+.+||..+|
T Consensus       156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dp  232 (312)
T cd05585         156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE--NVNEMYRKI-LQEPLRFPDGFDRDAKDLLIGLLSRDP  232 (312)
T ss_pred             CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC--CHHHHHHHH-HcCCCCCCCcCCHHHHHHHHHHcCCCH
Confidence            57899999999999999999999999999999999999742  223332222 223445667789999999999999999


Q ss_pred             CCCC---ChhhhhcCccccccccc
Q psy14555         81 DKRA---TAGELLEDPFLADLTAT  101 (222)
Q Consensus        81 ~~R~---s~~~~l~h~~~~~~~~~  101 (222)
                      .+|+   ++.+++.||||....+.
T Consensus       233 ~~R~~~~~~~e~l~hp~~~~~~~~  256 (312)
T cd05585         233 TRRLGYNGAQEIKNHPFFSQLSWK  256 (312)
T ss_pred             HHcCCCCCHHHHHcCCCcCCCCHH
Confidence            9997   57899999999876443

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.75  E-value=2.3e-18  Score=141.08  Aligned_cols=98  Identities=23%  Similarity=0.412  Sum_probs=80.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|..||...  ......... .......|..++..+.+|+.+||..+|
T Consensus       159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~--~~~~~~~~i-~~~~~~~~~~~~~~~~~li~~~l~~dP  235 (318)
T cd05570         159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD--DEDELFQSI-LEDEVRYPRWLSKEAKSILKSFLTKNP  235 (318)
T ss_pred             CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC--CHHHHHHHH-HcCCCCCCCcCCHHHHHHHHHHccCCH
Confidence            56899999999999999999999999999999999999643  223332222 222334566789999999999999999


Q ss_pred             CCCCCh-----hhhhcCccccccccc
Q psy14555         81 DKRATA-----GELLEDPFLADLTAT  101 (222)
Q Consensus        81 ~~R~s~-----~~~l~h~~~~~~~~~  101 (222)
                      .+||++     .+++.||||....+.
T Consensus       236 ~~R~s~~~~~~~~ll~~~~~~~~~~~  261 (318)
T cd05570         236 EKRLGCLPTGEQDIKGHPFFREIDWD  261 (318)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence            999999     999999999886554

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.74  E-value=2.4e-18  Score=140.93  Aligned_cols=98  Identities=23%  Similarity=0.422  Sum_probs=79.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||++.+..|+.++||||+||++|+|++|..||...  .......... ...+..|..++.++++|+.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP  235 (316)
T cd05620         159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD--DEDELFESIR-VDTPHYPRWITKESKDILEKLFERDP  235 (316)
T ss_pred             CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHccCCH
Confidence            57899999999999999999999999999999999999743  2233332222 22344566789999999999999999


Q ss_pred             CCCCCh-hhhhcCccccccccc
Q psy14555         81 DKRATA-GELLEDPFLADLTAT  101 (222)
Q Consensus        81 ~~R~s~-~~~l~h~~~~~~~~~  101 (222)
                      .+|+++ ++++.||||....+.
T Consensus       236 ~~R~~~~~~~~~h~~f~~~~~~  257 (316)
T cd05620         236 TRRLGVVGNIRGHPFFKTINWT  257 (316)
T ss_pred             HHcCCChHHHHcCCCcCCCCHH
Confidence            999998 578899999886544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.74  E-value=2.2e-18  Score=141.80  Aligned_cols=99  Identities=24%  Similarity=0.440  Sum_probs=80.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++|..||...  ........ ........|..++.++.+|+.+||..+|
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~--~~~~~~~~-~~~~~~~~p~~~~~~~~~li~~~L~~dP  234 (328)
T cd05593         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFEL-ILMEDIKFPRTLSADAKSLLSGLLIKDP  234 (328)
T ss_pred             CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC--CHHHHHHH-hccCCccCCCCCCHHHHHHHHHHcCCCH
Confidence            57899999999999999999999999999999999999642  22222222 1223345567789999999999999999


Q ss_pred             CCCC-----ChhhhhcCcccccccccc
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~  102 (222)
                      .+|+     ++.+++.|+||.+..+..
T Consensus       235 ~~R~~~~~~~~~~il~h~~~~~~~~~~  261 (328)
T cd05593         235 NKRLGGGPDDAKEIMRHSFFTGVNWQD  261 (328)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence            9997     899999999998866544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.74  E-value=3.4e-18  Score=140.01  Aligned_cols=98  Identities=21%  Similarity=0.455  Sum_probs=79.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|..||...  .......... ...+..|..++.++.+++.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~--~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~l~~~P  235 (316)
T cd05619         159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGH--DEEELFQSIR-MDNPCYPRWLTREAKDILVKLFVREP  235 (316)
T ss_pred             CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCC--CHHHHHHHHH-hCCCCCCccCCHHHHHHHHHHhccCH
Confidence            56899999999999999999999999999999999999743  2233222222 12234456689999999999999999


Q ss_pred             CCCCChh-hhhcCccccccccc
Q psy14555         81 DKRATAG-ELLEDPFLADLTAT  101 (222)
Q Consensus        81 ~~R~s~~-~~l~h~~~~~~~~~  101 (222)
                      .+|+++. +++.||||....+.
T Consensus       236 ~~R~~~~~~l~~h~~~~~~~~~  257 (316)
T cd05619         236 ERRLGVKGDIRQHPFFREIDWS  257 (316)
T ss_pred             hhcCCChHHHHcCcccCCCCHH
Confidence            9999996 89999999886654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.74  E-value=3.6e-18  Score=140.25  Aligned_cols=99  Identities=21%  Similarity=0.368  Sum_probs=80.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|++||...  ......... .......|..++..+.+++.+||..+|
T Consensus       164 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~--~~~~~~~~i-~~~~~~~~~~~~~~~~~li~~~l~~~P  240 (324)
T cd05587         164 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE--DEDELFQSI-MEHNVSYPKSLSKEAVSICKGLLTKHP  240 (324)
T ss_pred             CccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHH-HcCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            56899999999999999999999999999999999999742  223322222 223345567789999999999999999


Q ss_pred             CCCCCh-----hhhhcCcccccccccc
Q psy14555         81 DKRATA-----GELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s~-----~~~l~h~~~~~~~~~~  102 (222)
                      .+|++.     .+++.||||....+..
T Consensus       241 ~~R~~~~~~~~~~~~~hp~~~~~~~~~  267 (324)
T cd05587         241 AKRLGCGPTGERDIREHAFFRRIDWEK  267 (324)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence            999976     7999999998866543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.74  E-value=3.6e-18  Score=140.28  Aligned_cols=100  Identities=24%  Similarity=0.418  Sum_probs=80.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|..||...  ......... .......|..+++.+.+|+.+||..+|
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~--~~~~~~~~~-~~~~~~~p~~~~~~~~~li~~~L~~dP  234 (323)
T cd05595         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELI-LMEEIRFPRTLSPEAKSLLAGLLKKDP  234 (323)
T ss_pred             CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHH-hcCCCCCCCCCCHHHHHHHHHHccCCH
Confidence            57899999999999999999999999999999999999642  222222221 122334566789999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRS  103 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~  103 (222)
                      .+|+     ++.+++.|+||.+..+...
T Consensus       235 ~~R~~~~~~~~~~~l~h~~~~~~~~~~~  262 (323)
T cd05595         235 KQRLGGGPSDAKEVMEHRFFLSINWQDV  262 (323)
T ss_pred             HHhCCCCCCCHHHHHcCCCcCCCCHHHH
Confidence            9998     8999999999988665543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0582|consensus

Probab=99.74  E-value=2.1e-18  Score=141.02  Aligned_cols=96  Identities=30%  Similarity=0.543  Sum_probs=75.0

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC---------CCCccccHHHH
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---------EIPAELSDKAK   69 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~   69 (222)
                      |++|||||++..  .+|+.|+||||||+...||.+|..||... .+...+... ..+.++         .....++..++
T Consensus       193 tp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~-pPmkvLl~t-Lqn~pp~~~t~~~~~d~~k~~~ksf~  270 (516)
T KOG0582|consen  193 TPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY-PPMKVLLLT-LQNDPPTLLTSGLDKDEDKKFSKSFR  270 (516)
T ss_pred             cccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC-ChHHHHHHH-hcCCCCCcccccCChHHhhhhcHHHH
Confidence            789999998543  47999999999999999999999999754 333333222 222222         11234678899


Q ss_pred             HHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         70 QFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        70 ~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .++..||.+||.+|||++++++|+||+..
T Consensus       271 e~i~~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  271 EMIALCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             HHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence            99999999999999999999999999864

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.74  E-value=4.8e-18  Score=136.49  Aligned_cols=105  Identities=19%  Similarity=0.333  Sum_probs=78.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|..||......  ...................++.++.+++.+||..
T Consensus       157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  236 (277)
T cd05607         157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAK  236 (277)
T ss_pred             CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhcc
Confidence            56899999999999999999999999999999999999643221  1122222222111122245789999999999999


Q ss_pred             CCCCCCCh----hhhhcCccccccccccCCC
Q psy14555         79 DPDKRATA----GELLEDPFLADLTATRSSS  105 (222)
Q Consensus        79 ~p~~R~s~----~~~l~h~~~~~~~~~~~~~  105 (222)
                      +|.+||++    .+++.|+||+...+.....
T Consensus       237 ~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~  267 (277)
T cd05607         237 KPEDRLGSREKNDDPRKHEFFKTINFPRLEA  267 (277)
T ss_pred             CHhhCCCCccchhhhhcChhhcCCCHHHHhc
Confidence            99999999    6678999998866544333

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.74  E-value=3.8e-18  Score=140.10  Aligned_cols=99  Identities=23%  Similarity=0.416  Sum_probs=79.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||.+.+..|+.++|+||+||++|+|++|..||...  ......... .......|..++..+.+++.+||..+|
T Consensus       164 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~--~~~~~~~~i-~~~~~~~p~~~~~~~~~li~~~L~~dP  240 (324)
T cd05589         164 TPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD--DEEEVFDSI-VNDEVRYPRFLSREAISIMRRLLRRNP  240 (324)
T ss_pred             CccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC--CHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            56899999999999999999999999999999999999642  222222221 122334566789999999999999999


Q ss_pred             CCCC-----ChhhhhcCcccccccccc
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~  102 (222)
                      .+||     ++.+++.||||+...+..
T Consensus       241 ~~R~~~~~~~~~~l~~~~~f~~~~~~~  267 (324)
T cd05589         241 ERRLGSGEKDAEDVKKQPFFRDINWDD  267 (324)
T ss_pred             hHcCCCCCCCHHHHhhCCCcCCCCHHH
Confidence            9999     688999999998765443

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0660|consensus

Probab=99.74  E-value=7.7e-18  Score=134.47  Aligned_cols=101  Identities=29%  Similarity=0.405  Sum_probs=74.9

Q ss_pred             CcceecCccc-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHH--------------hh---------hccC
Q psy14555          1 MNVIFLTQYS-VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR--------------VG---------FHKM   56 (222)
Q Consensus         1 t~~y~aPe~~-~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~--------------~~---------~~~~   56 (222)
                      |.-|-|||.+ ....|+.++||||+|||+.||++|++-|++.....+....              ..         ..+.
T Consensus       190 TRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~  269 (359)
T KOG0660|consen  190 TRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQ  269 (359)
T ss_pred             eeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCC
Confidence            6679999954 4567999999999999999999999999853222111100              00         0111


Q ss_pred             CCCCC-----ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccccc
Q psy14555         57 HPEIP-----AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTAT  101 (222)
Q Consensus        57 ~~~~~-----~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~~  101 (222)
                      .++.|     +..++.+.+|+.+||..||.+|+|+++++.|||+......
T Consensus       270 ~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp  319 (359)
T KOG0660|consen  270 IPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDP  319 (359)
T ss_pred             CCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCC
Confidence            11111     3578999999999999999999999999999999876433

>KOG0596|consensus

Probab=99.74  E-value=1.5e-18  Score=145.20  Aligned_cols=97  Identities=29%  Similarity=0.450  Sum_probs=70.7

Q ss_pred             CcceecCcccCCCCC-----------CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccH-HH
Q psy14555          1 MNVIFLTQYSVNSSY-----------SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSD-KA   68 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-----------~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   68 (222)
                      |+-||+||-+....+           +.++||||||||||+|+.|++||....+....+..+......-++|...+. ++
T Consensus       524 T~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~l  603 (677)
T KOG0596|consen  524 TVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDEL  603 (677)
T ss_pred             cccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHH
Confidence            788999996654443           578999999999999999999996432222223322222222233333333 38


Q ss_pred             HHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         69 KQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        69 ~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .++++.||..||++||++.++|+|||+..
T Consensus       604 i~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  604 IDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            99999999999999999999999999864

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.74  E-value=2.4e-18  Score=141.20  Aligned_cols=104  Identities=18%  Similarity=0.317  Sum_probs=82.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|..||...  .......... ......|..++.++.+++.+||..+|
T Consensus       164 t~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~~l~~~p  240 (323)
T cd05616         164 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIM-EHNVAYPKSMSKEAVAICKGLMTKHP  240 (323)
T ss_pred             ChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC--CHHHHHHHHH-hCCCCCCCcCCHHHHHHHHHHcccCH
Confidence            56899999999999999999999999999999999999743  2233222222 22344566789999999999999999


Q ss_pred             CCCCCh-----hhhhcCccccccccccCCCCC
Q psy14555         81 DKRATA-----GELLEDPFLADLTATRSSSSG  107 (222)
Q Consensus        81 ~~R~s~-----~~~l~h~~~~~~~~~~~~~~~  107 (222)
                      .+|+++     .+++.|+||+...|.......
T Consensus       241 ~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~  272 (323)
T cd05616         241 GKRLGCGPEGERDIKEHAFFRYIDWEKLERKE  272 (323)
T ss_pred             HhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCC
Confidence            999974     789999999987665544333

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.73  E-value=5e-18  Score=136.98  Aligned_cols=94  Identities=24%  Similarity=0.441  Sum_probs=71.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hcc--CCC-------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHK--MHP-------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~--~~~-------------------   58 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|.+||..... ...+.... ...  ...                   
T Consensus       172 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (290)
T cd07862         172 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ  250 (290)
T ss_pred             cccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHHhCCCChhhchhhhcccchhccCCCCC
Confidence            5679999999999999999999999999999999999975322 22211111 000  000                   


Q ss_pred             ---CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 ---EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 ---~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                         .....++..+++|+.+||+.+|.+||++.+++.||||
T Consensus       251 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         251 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             CHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence               0112467788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.73  E-value=2.5e-18  Score=140.98  Aligned_cols=100  Identities=23%  Similarity=0.395  Sum_probs=80.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|++||...  .......... ......|..++.++.+++.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~~~~~~~ll~~~L~~dp  235 (321)
T cd05591         159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD--NEDDLFESIL-HDDVLYPVWLSKEAVSILKAFMTKNP  235 (321)
T ss_pred             CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC--CHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhccCH
Confidence            56899999999999999999999999999999999999743  2233322222 22234456678999999999999999


Q ss_pred             CCCC-------ChhhhhcCccccccccccC
Q psy14555         81 DKRA-------TAGELLEDPFLADLTATRS  103 (222)
Q Consensus        81 ~~R~-------s~~~~l~h~~~~~~~~~~~  103 (222)
                      .+|+       ++.+++.||||....|...
T Consensus       236 ~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~  265 (321)
T cd05591         236 NKRLGCVASQGGEDAIKQHPFFKEIDWVLL  265 (321)
T ss_pred             HHcCCCCCCCCCHHHHhcCCccCCCCHHHH
Confidence            9999       8899999999988665543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.73  E-value=4.6e-18  Score=139.59  Aligned_cols=100  Identities=22%  Similarity=0.383  Sum_probs=80.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..++.++||||+||++|+|++|.+||... .. ........ ......|..++..+.+|+.+||..+|
T Consensus       163 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~-~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p  239 (323)
T cd05584         163 TIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE-NR-KKTIDKIL-KGKLNLPPYLTPEARDLLKKLLKRNP  239 (323)
T ss_pred             CccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC-CH-HHHHHHHH-cCCCCCCCCCCHHHHHHHHHHcccCH
Confidence            56899999999999999999999999999999999999743 22 22222211 22344566789999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRS  103 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~  103 (222)
                      .+|+     ++.+++.||||....+...
T Consensus       240 ~~R~~~~~~~~~~l~~h~~~~~~~~~~~  267 (323)
T cd05584         240 SSRLGAGPGDAAEVQSHPFFRHVNWDDL  267 (323)
T ss_pred             hHcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence            9999     8999999999987655443

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.73  E-value=3.7e-18  Score=140.55  Aligned_cols=101  Identities=26%  Similarity=0.452  Sum_probs=79.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-------hHHHHHHhhhccCCCCCCccccHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS-------PQAALYRVGFHKMHPEIPAELSDKAKQFIL   73 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~   73 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|..||.....       ........ ........|..++..+.+++.
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-i~~~~~~~p~~~~~~~~~ll~  237 (329)
T cd05618         159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-ILEKQIRIPRSLSVKAASVLK  237 (329)
T ss_pred             CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH-HhcCCCCCCCCCCHHHHHHHH
Confidence            5789999999999999999999999999999999999952111       11111111 223334567778999999999


Q ss_pred             HhcccCCCCCCCh------hhhhcCcccccccccc
Q psy14555         74 RCFEKDPDKRATA------GELLEDPFLADLTATR  102 (222)
Q Consensus        74 ~~l~~~p~~R~s~------~~~l~h~~~~~~~~~~  102 (222)
                      +||..+|.+|+++      .+++.||||+...|..
T Consensus       238 ~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~  272 (329)
T cd05618         238 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDL  272 (329)
T ss_pred             HHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHH
Confidence            9999999999984      7999999998876543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0614|consensus

Probab=99.73  E-value=8.3e-18  Score=139.67  Aligned_cols=115  Identities=19%  Similarity=0.301  Sum_probs=94.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+-|+|||+++.++++-++|+||+|+.+|||++|.|||.+. ++......+........+|..++..+.+|++++...+|
T Consensus       582 TpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~-dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P  660 (732)
T KOG0614|consen  582 TPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV-DPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNP  660 (732)
T ss_pred             CcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC-chHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCc
Confidence            78999999999999999999999999999999999999864 33333222222222345678899999999999999999


Q ss_pred             CCCCC-----hhhhhcCccccccccccCCCCCCCCCCCCCC
Q psy14555         81 DKRAT-----AGELLEDPFLADLTATRSSSSGLLSPEVNLN  116 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~  116 (222)
                      .+|..     ..+|.+|.||.+.+|.......+.+|..+..
T Consensus       661 ~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~v  701 (732)
T KOG0614|consen  661 TERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSV  701 (732)
T ss_pred             HhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccC
Confidence            99974     7899999999999999888887777766543

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.73  E-value=4.7e-18  Score=139.90  Aligned_cols=102  Identities=23%  Similarity=0.357  Sum_probs=79.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh------HHHHHHhhhccCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP------QAALYRVGFHKMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~   74 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|+.||...+..      ................|..++..+.+++.+
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~  238 (329)
T cd05588         159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKG  238 (329)
T ss_pred             CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            56799999999999999999999999999999999999532111      111111112233345667789999999999


Q ss_pred             hcccCCCCCCC------hhhhhcCcccccccccc
Q psy14555         75 CFEKDPDKRAT------AGELLEDPFLADLTATR  102 (222)
Q Consensus        75 ~l~~~p~~R~s------~~~~l~h~~~~~~~~~~  102 (222)
                      ||..+|.+|++      +.+++.||||....+..
T Consensus       239 ~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~  272 (329)
T cd05588         239 FLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDL  272 (329)
T ss_pred             HhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHH
Confidence            99999999987      68999999998765543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.73  E-value=8.5e-18  Score=136.67  Aligned_cols=98  Identities=23%  Similarity=0.370  Sum_probs=71.6

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCC---------------C-----
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMH---------------P-----   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~---------------~-----   58 (222)
                      |..|+|||.+.+ ..|+.++|+||+||++|+|++|.+||.+............. ...+               +     
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (303)
T cd07869         166 TLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTL  245 (303)
T ss_pred             cCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccc
Confidence            567999998765 56899999999999999999999999754333222211110 0000               0     


Q ss_pred             CCC---------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 EIP---------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ~~~---------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..+         ...+..+.+|+.+||+.+|.+|+|+.+++.||||+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         246 YSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             cCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence            000         1235678999999999999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.73  E-value=7.2e-18  Score=138.08  Aligned_cols=99  Identities=25%  Similarity=0.459  Sum_probs=79.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|..||...  ......... ....+..|..++.++.+|+.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~--~~~~~~~~i-~~~~~~~~~~~~~~~~~ll~~~l~~~P  235 (316)
T cd05592         159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE--DEDELFDSI-LNDRPHFPRWISKEAKDCLSKLFERDP  235 (316)
T ss_pred             CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC--CHHHHHHHH-HcCCCCCCCCCCHHHHHHHHHHccCCH
Confidence            57899999999999999999999999999999999999753  223322222 223445567789999999999999999


Q ss_pred             CCCCChh-hhhcCcccccccccc
Q psy14555         81 DKRATAG-ELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s~~-~~l~h~~~~~~~~~~  102 (222)
                      .+|+++. +++.||||....+..
T Consensus       236 ~~R~~~~~~l~~h~~~~~~~~~~  258 (316)
T cd05592         236 TKRLGVDGDIRQHPFFRGIDWER  258 (316)
T ss_pred             HHcCCChHHHHcCcccCCCCHHH
Confidence            9999864 788999998765543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.73  E-value=9.7e-18  Score=134.88  Aligned_cols=102  Identities=21%  Similarity=0.338  Sum_probs=79.7

Q ss_pred             CcceecCcccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSV-NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~-~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||... +..++.++|+||+||++|+|++|..||......................+..++.++.+++.+||..+
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  237 (279)
T cd05633         158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRD  237 (279)
T ss_pred             CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCC
Confidence            56899999876 45689999999999999999999999964332222222222223344566778999999999999999


Q ss_pred             CCCCC-----ChhhhhcCcccccccccc
Q psy14555         80 PDKRA-----TAGELLEDPFLADLTATR  102 (222)
Q Consensus        80 p~~R~-----s~~~~l~h~~~~~~~~~~  102 (222)
                      |.+|+     +++++++||||++..+..
T Consensus       238 p~~R~~~~~~~~~~~~~h~~~~~~~~~~  265 (279)
T cd05633         238 VSKRLGCLGRGAQEVKEHVFFKGIDWQQ  265 (279)
T ss_pred             HHHhcCCCCCCHHHHHhCccccCCCHhH
Confidence            99999     699999999999865444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=8.3e-18  Score=135.65  Aligned_cols=105  Identities=25%  Similarity=0.364  Sum_probs=81.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH-HHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA-ALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..++.++|+||+||++|+|++|..||........ ..............+..++..+.+|+.+||..|
T Consensus       164 ~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05605         164 TVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKD  243 (285)
T ss_pred             CCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCC
Confidence            4689999999999999999999999999999999999974322111 111111222334455668999999999999999


Q ss_pred             CCCCC-----ChhhhhcCccccccccccCCC
Q psy14555         80 PDKRA-----TAGELLEDPFLADLTATRSSS  105 (222)
Q Consensus        80 p~~R~-----s~~~~l~h~~~~~~~~~~~~~  105 (222)
                      |.+||     ++++++.||||....+.....
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~  274 (285)
T cd05605         244 PGFRLGCRGEGAEEVKAHPFFRTANFKRLEA  274 (285)
T ss_pred             HHHhcCCCCCCHHHHhcCcCccCCCHHHHhh
Confidence            99999     889999999998866554433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.72  E-value=1.1e-17  Score=135.20  Aligned_cols=94  Identities=19%  Similarity=0.294  Sum_probs=69.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccC------------------CC--
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKM------------------HP--   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~------------------~~--   58 (222)
                      |+.|+|||.+.+ ..|+.++|+||+||++|+|++|++||.... ......... ..+.                  ..  
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (288)
T cd07871         166 TLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST-VKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQ  244 (288)
T ss_pred             cccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChHHhhccccchhhhccccCc
Confidence            567999998765 568999999999999999999999997432 222211110 0000                  00  


Q ss_pred             -------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 -------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 -------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                             .....++.++.+|+.+||..+|.+|+|++++++||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         245 YRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             cCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence                   0012457889999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.72  E-value=1.1e-17  Score=137.82  Aligned_cols=99  Identities=30%  Similarity=0.417  Sum_probs=71.8

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHH--------------Hh-----------hh
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY--------------RV-----------GF   53 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~--------------~~-----------~~   53 (222)
                      |..|+|||++.+  ..|+.++||||+||++|+|++|++||...........              ..           ..
T Consensus       169 t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  248 (338)
T cd07859         169 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMR  248 (338)
T ss_pred             CCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhc
Confidence            567999998765  6899999999999999999999999964321110000              00           00


Q ss_pred             ccCCCC---CCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         54 HKMHPE---IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        54 ~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      ...+..   .....+..+.+++.+||..+|.+||++++++.||||++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         249 KKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             ccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence            000000   0123577889999999999999999999999999998653

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.72  E-value=9.8e-18  Score=135.04  Aligned_cols=94  Identities=26%  Similarity=0.456  Sum_probs=71.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hcc-----------------CCC----
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHK-----------------MHP----   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~-----------------~~~----   58 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|.+||..... ........ ...                 ...    
T Consensus       170 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (288)
T cd07863         170 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPR  248 (288)
T ss_pred             cccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-HHHHHHHHHHhCCCChhhCcccccccccccCCCCCC
Confidence            4679999999999999999999999999999999999964322 21111110 000                 000    


Q ss_pred             ---CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 ---EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 ---~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                         .....++..+.+++.+||..||.+||++.+++.||||
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         249 PVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             chHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence               0112467788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG4721|consensus

Probab=99.72  E-value=1.3e-18  Score=146.30  Aligned_cols=94  Identities=24%  Similarity=0.477  Sum_probs=82.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+...+.+||||||||||||||+|..||... .....++-++......+.|..+++.++-|++.||...|
T Consensus       274 TVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV-dssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKp  352 (904)
T KOG4721|consen  274 TVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV-DSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKP  352 (904)
T ss_pred             hHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc-chheeEEeccCCcccccCcccCchHHHHHHHHHHhcCC
Confidence            78999999999999999999999999999999999999753 23344566666777788899999999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      ..||+|.+++.|-=+
T Consensus       353 RNRPSFrqil~HldI  367 (904)
T KOG4721|consen  353 RNRPSFRQILLHLDI  367 (904)
T ss_pred             CCCccHHHHHHHHhh
Confidence            999999999998433

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.72  E-value=5.4e-18  Score=139.59  Aligned_cols=101  Identities=29%  Similarity=0.453  Sum_probs=78.7

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGS--PQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+.+. .++.++||||+||++|+|++|..||.....  ....+.. ......+..+..++..+.+++.+||.
T Consensus       169 t~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~  247 (332)
T cd05614         169 TIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR-RILKCDPPFPSFIGPEAQDLLHKLLR  247 (332)
T ss_pred             CccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH-HHhcCCCCCCCCCCHHHHHHHHHHcC
Confidence            5789999988765 488999999999999999999999963221  1222222 22334455667789999999999999


Q ss_pred             cCCCCCC-----ChhhhhcCcccccccccc
Q psy14555         78 KDPDKRA-----TAGELLEDPFLADLTATR  102 (222)
Q Consensus        78 ~~p~~R~-----s~~~~l~h~~~~~~~~~~  102 (222)
                      .+|.+|+     ++.++++||||+...+..
T Consensus       248 ~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~  277 (332)
T cd05614         248 KDPKKRLGAGPQGASEIKEHPFFKGLDWEA  277 (332)
T ss_pred             CCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence            9999999     788999999998765443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.72  E-value=4.3e-17  Score=135.43  Aligned_cols=98  Identities=30%  Similarity=0.413  Sum_probs=74.5

Q ss_pred             CcceecCcccCC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHhhhccCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVN-----SSYSPQADIWSLGCTIVEMATGKPPFIELGSP-QAALYRVGFHKMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~-----~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~   74 (222)
                      |..|+|||++..     ..++.++|||||||++|+|++|+.||...... ................+..++.++++|+.+
T Consensus       231 t~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  310 (353)
T PLN00034        231 TIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISC  310 (353)
T ss_pred             CccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHH
Confidence            568999998743     33456899999999999999999999632211 122222222333444566789999999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||..+|.+||++.+++.||||.+.
T Consensus       311 ~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        311 CLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             HccCChhhCcCHHHHhcCcccccC
Confidence            999999999999999999999864

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.72  E-value=1.6e-17  Score=132.46  Aligned_cols=95  Identities=64%  Similarity=1.105  Sum_probs=76.9

Q ss_pred             CcceecCcccCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSS--YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~--y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||++....  ++.++|+||+|+++|+|++|.+||...................+..|..++..+.+|+.+||..
T Consensus       172 ~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  251 (268)
T cd06624         172 TLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEP  251 (268)
T ss_pred             CccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCC
Confidence            45799999876544  8899999999999999999999997544333333333333444556777899999999999999


Q ss_pred             CCCCCCChhhhhcCccc
Q psy14555         79 DPDKRATAGELLEDPFL   95 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~   95 (222)
                      +|.+||++.+++.||||
T Consensus       252 ~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         252 DPDKRASAHDLLQDPFL  268 (268)
T ss_pred             CchhCCCHHHHHhCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.72  E-value=1.6e-17  Score=136.85  Aligned_cols=96  Identities=24%  Similarity=0.456  Sum_probs=73.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-----------------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-----------------------------   51 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-----------------------------   51 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|+.||.....  ..+...                             
T Consensus       165 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (331)
T cd06649         165 TRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDA--KELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG  242 (331)
T ss_pred             CcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHhcccccccccCCccccCcccccccccccc
Confidence            5689999999999999999999999999999999999963211  111100                             


Q ss_pred             -----------------hhccCCCCC-CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         52 -----------------GFHKMHPEI-PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        52 -----------------~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                       ......+.. ...++.++++|+.+||..+|.+||++.+++.||||+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence                             000111111 12467899999999999999999999999999999754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.72  E-value=9.1e-18  Score=135.45  Aligned_cols=103  Identities=23%  Similarity=0.368  Sum_probs=79.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH-HHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-AALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|.+||....... ...............+..++..+.+|+.+||+.+
T Consensus       164 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05630         164 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKD  243 (285)
T ss_pred             CccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcC
Confidence            568999999999999999999999999999999999997432211 1111111111222345667889999999999999


Q ss_pred             CCCCCC-----hhhhhcCccccccccccC
Q psy14555         80 PDKRAT-----AGELLEDPFLADLTATRS  103 (222)
Q Consensus        80 p~~R~s-----~~~~l~h~~~~~~~~~~~  103 (222)
                      |.+|++     +.+++.||||....+...
T Consensus       244 p~~R~s~~~~~~~~~~~h~~~~~~~~~~~  272 (285)
T cd05630         244 PKERLGCQGGGAREVKEHPLFKQINFKRL  272 (285)
T ss_pred             HHHccCCCCCchHHHHcChhhhccCHHHH
Confidence            999999     899999999987655543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.72  E-value=2.4e-17  Score=133.78  Aligned_cols=97  Identities=35%  Similarity=0.634  Sum_probs=76.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||.+.+..++.++|+||+||++|+|++|..||.... .......... .......+..++..+.+++.+||..+
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  256 (296)
T cd06655         178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN-PLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMD  256 (296)
T ss_pred             CccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcC
Confidence            457999999999999999999999999999999999997532 2222222211 11222345667899999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.||||...
T Consensus       257 p~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         257 VEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             hhhCCCHHHHhhChHhhhc
Confidence            9999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.72  E-value=2.4e-17  Score=130.53  Aligned_cols=93  Identities=26%  Similarity=0.472  Sum_probs=75.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||...+..++.++|+||+||++|+|++|..||... . .............+..+...+..+.+++.+||..+|
T Consensus       165 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  242 (257)
T cd08223         165 TPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK-D-MNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRP  242 (257)
T ss_pred             CcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-C-HHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCc
Confidence            46799999999999999999999999999999999999642 2 222222222333344566788999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.||||
T Consensus       243 ~~Rp~~~~~l~~~~~  257 (257)
T cd08223         243 EKRPSVKSILRQPYI  257 (257)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.72  E-value=2.4e-17  Score=131.22  Aligned_cols=94  Identities=35%  Similarity=0.705  Sum_probs=75.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||+..+..++.++|+||+||++|+|++|..||..... ........ .....+..+..++..+.+++.+||..+
T Consensus       171 ~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  249 (265)
T cd06631         171 TPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-LAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRD  249 (265)
T ss_pred             CccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-HHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCC
Confidence            4579999999999999999999999999999999999975322 22222221 112334456678999999999999999


Q ss_pred             CCCCCChhhhhcCccc
Q psy14555         80 PDKRATAGELLEDPFL   95 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~   95 (222)
                      |.+||++.+++.||||
T Consensus       250 p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         250 QHERPSALQLLRHDFL  265 (265)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=2.4e-17  Score=130.95  Aligned_cols=93  Identities=34%  Similarity=0.689  Sum_probs=77.0

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      ..|+|||.+.+..++.++|+||+||++|++++|+.||... ..................+..++..+.+++.+||..+|.
T Consensus       171 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  249 (263)
T cd06625         171 PYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF-EAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAK  249 (263)
T ss_pred             ccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc-chHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcc
Confidence            4699999999999999999999999999999999999643 222333333333344556677899999999999999999


Q ss_pred             CCCChhhhhcCccc
Q psy14555         82 KRATAGELLEDPFL   95 (222)
Q Consensus        82 ~R~s~~~~l~h~~~   95 (222)
                      +||++.+++.|+||
T Consensus       250 ~Rpt~~~ll~~~~~  263 (263)
T cd06625         250 KRPSAEELLRHFFV  263 (263)
T ss_pred             cCCCHHHHhhCCCC
Confidence            99999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.71  E-value=1.1e-17  Score=137.63  Aligned_cols=102  Identities=23%  Similarity=0.370  Sum_probs=80.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----ChHHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELG-----SPQAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|..||....     ......... ........|..++..+.+++.+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~li~~~  237 (327)
T cd05617         159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV-ILEKPIRIPRFLSVKASHVLKGF  237 (327)
T ss_pred             CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH-HHhCCCCCCCCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999999995321     111222222 22334456777899999999999


Q ss_pred             cccCCCCCCCh------hhhhcCccccccccccC
Q psy14555         76 FEKDPDKRATA------GELLEDPFLADLTATRS  103 (222)
Q Consensus        76 l~~~p~~R~s~------~~~l~h~~~~~~~~~~~  103 (222)
                      |..+|.+|+++      .+++.||||....|...
T Consensus       238 L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~  271 (327)
T cd05617         238 LNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLL  271 (327)
T ss_pred             hccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHH
Confidence            99999999974      69999999998765543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.71  E-value=1.6e-17  Score=148.46  Aligned_cols=100  Identities=27%  Similarity=0.412  Sum_probs=78.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC-CCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM-HPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|.+||... .....+..+..... .+.....++..+.+++.+||..+
T Consensus       543 T~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~-~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~d  621 (669)
T cd05610         543 TPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDE-TPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMD  621 (669)
T ss_pred             CccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccC
Confidence            78899999999999999999999999999999999999743 22222222211111 12223456888999999999999


Q ss_pred             CCCCCChhhhhcCccccccccc
Q psy14555         80 PDKRATAGELLEDPFLADLTAT  101 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~~~~  101 (222)
                      |.+||++.+++.||||....+.
T Consensus       622 P~~R~ta~e~l~h~~~~~~~~~  643 (669)
T cd05610         622 PTKRAGLKELKQHPLFHGVDWE  643 (669)
T ss_pred             hhHCcCHHHHHhCHhhcCCCHH
Confidence            9999999999999999876543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.71  E-value=2e-18  Score=141.89  Aligned_cols=99  Identities=24%  Similarity=0.431  Sum_probs=80.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|..||...  ......... .......|..+++++.+|+.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~--~~~~~~~~i-~~~~~~~p~~~~~~~~~li~~~L~~dP  235 (325)
T cd05594         159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELI-LMEEIRFPRTLSPEAKSLLSGLLKKDP  235 (325)
T ss_pred             CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC--CHHHHHHHH-hcCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            57899999999999999999999999999999999999642  222222221 222344566789999999999999999


Q ss_pred             CCCC-----ChhhhhcCcccccccccc
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~  102 (222)
                      .+|+     ++.+++.|+||.+..+..
T Consensus       236 ~~R~~~~~~~~~~il~h~~~~~~~~~~  262 (325)
T cd05594         236 KQRLGGGPDDAKEIMQHKFFAGIVWQD  262 (325)
T ss_pred             HHhCCCCCCCHHHHhcCCCcCCCCHHH
Confidence            9997     899999999999865553

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.71  E-value=2.8e-17  Score=136.84  Aligned_cols=97  Identities=23%  Similarity=0.402  Sum_probs=72.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh--------------------hccCCC--
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG--------------------FHKMHP--   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~--------------------~~~~~~--   58 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|..||...... .......                    .....+  
T Consensus       185 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (359)
T cd07876         185 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQY  263 (359)
T ss_pred             cCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCC
Confidence            56799999999999999999999999999999999999743211 1100000                    000000  


Q ss_pred             ------------------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 ------------------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                        ......+..+++|+.+||..+|.+||++.+++.||||...
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  321 (359)
T cd07876         264 PGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW  321 (359)
T ss_pred             CCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence                              0111245778999999999999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4717|consensus

Probab=99.71  E-value=1e-17  Score=139.53  Aligned_cols=95  Identities=26%  Similarity=0.496  Sum_probs=81.5

Q ss_pred             cceecCcccCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYS-PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~-~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|-|||++++..|+ ++|||||+|||||.|.+|++||.+.++ .+.+..  +..+....|..++.+|++||.+||..+|
T Consensus       182 LAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND-SETLTm--ImDCKYtvPshvS~eCrdLI~sMLvRdP  258 (864)
T KOG4717|consen  182 LAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND-SETLTM--IMDCKYTVPSHVSKECRDLIQSMLVRDP  258 (864)
T ss_pred             hhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc-hhhhhh--hhcccccCchhhhHHHHHHHHHHHhcCc
Confidence            579999999999998 589999999999999999999976433 333333  3455667788999999999999999999


Q ss_pred             CCCCChhhhhcCccccccc
Q psy14555         81 DKRATAGELLEDPFLADLT   99 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~~   99 (222)
                      ++|.+.++|..|+|++...
T Consensus       259 kkRAslEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  259 KKRASLEEIVSTSWLQAGD  277 (864)
T ss_pred             hhhccHHHHhccccccCCC
Confidence            9999999999999998754

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.71  E-value=8.3e-18  Score=138.04  Aligned_cols=100  Identities=22%  Similarity=0.342  Sum_probs=79.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|..||...  .......... ......+..++..+.+++.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~--~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~l~~~p  235 (323)
T cd05575         159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--DTAEMYDNIL-NKPLRLKPNISVSARHLLEGLLQKDR  235 (323)
T ss_pred             ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC--CHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            56899999999999999999999999999999999999742  2233322222 22334455679999999999999999


Q ss_pred             CCCCCh----hhhhcCccccccccccC
Q psy14555         81 DKRATA----GELLEDPFLADLTATRS  103 (222)
Q Consensus        81 ~~R~s~----~~~l~h~~~~~~~~~~~  103 (222)
                      .+||++    .+++.||||....+...
T Consensus       236 ~~R~~~~~~~~~il~~~~~~~~~~~~~  262 (323)
T cd05575         236 TKRLGAKDDFLEIKNHVFFSSINWDDL  262 (323)
T ss_pred             HhCCCCCCCHHHHHcCCCcCCCCHHHH
Confidence            999987    59999999987665443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0192|consensus

Probab=99.71  E-value=2.2e-17  Score=136.46  Aligned_cols=90  Identities=24%  Similarity=0.433  Sum_probs=79.1

Q ss_pred             CcceecCcccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSV--NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~--~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.  ...|+.++||||||+++|||++|..||..... .............+..|..+++.+..++.+||..
T Consensus       207 T~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~  285 (362)
T KOG0192|consen  207 TYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPPIPKECPPHLSSLMERCWLV  285 (362)
T ss_pred             CccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCC
Confidence            78999999999  67999999999999999999999999986544 4445555567777888888999999999999999


Q ss_pred             CCCCCCChhhhhc
Q psy14555         79 DPDKRATAGELLE   91 (222)
Q Consensus        79 ~p~~R~s~~~~l~   91 (222)
                      +|..||++.+++.
T Consensus       286 dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  286 DPSRRPSFLEIVS  298 (362)
T ss_pred             CCCcCCCHHHHHH
Confidence            9999999998865

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.71  E-value=1.9e-17  Score=143.36  Aligned_cols=95  Identities=21%  Similarity=0.328  Sum_probs=79.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||..  ..................+..+++.+.+++.+||..+|
T Consensus       208 t~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  285 (496)
T PTZ00283        208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG--ENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDP  285 (496)
T ss_pred             CcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCh
Confidence            5689999999999999999999999999999999999974  23333333333334445667789999999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+||++.+++.|||++.
T Consensus       286 ~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        286 KRRPSSSKLLNMPICKL  302 (496)
T ss_pred             hhCcCHHHHHhCHHHHH
Confidence            99999999999999864

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.71  E-value=2.7e-17  Score=131.37  Aligned_cols=94  Identities=29%  Similarity=0.550  Sum_probs=71.5

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |..|+|||++.     ...|+.++|+||+||++|+|++|..||.... .................+..++..+.+|+.+|
T Consensus       174 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (272)
T cd06637         174 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKKWSKKFQSFIESC  252 (272)
T ss_pred             cccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC-HHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHH
Confidence            45799999876     3468899999999999999999999996432 22222221112222223345788999999999


Q ss_pred             cccCCCCCCChhhhhcCccc
Q psy14555         76 FEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~   95 (222)
                      |..+|.+||++.+++.||||
T Consensus       253 l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         253 LVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             cCCChhhCCCHHHHhhCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0591|consensus

Probab=99.71  E-value=1.8e-17  Score=128.75  Aligned_cols=84  Identities=26%  Similarity=0.449  Sum_probs=72.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC-ccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP-AELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~   79 (222)
                      |++||+||.+...+|+.++||||+||++|||+.-.+||.+.  .--.+...+..+.-++.| ...|.++..++..|+..|
T Consensus       191 TPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd  268 (375)
T KOG0591|consen  191 TPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVD  268 (375)
T ss_pred             CCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCC
Confidence            89999999999999999999999999999999999999853  444455555555555677 788999999999999999


Q ss_pred             CCCCCCh
Q psy14555         80 PDKRATA   86 (222)
Q Consensus        80 p~~R~s~   86 (222)
                      |..||+.
T Consensus       269 ~~~RP~t  275 (375)
T KOG0591|consen  269 PEQRPDT  275 (375)
T ss_pred             cccCCCc
Confidence            9999986

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.71  E-value=1.8e-17  Score=131.10  Aligned_cols=94  Identities=32%  Similarity=0.598  Sum_probs=73.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||.+.+..++.++|+||+||++|+|++|.+||..... ........ ........+..++..+.+++.+||..+
T Consensus       162 ~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd06612         162 TPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP-MRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKD  240 (256)
T ss_pred             CccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcch-hhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcC
Confidence            4579999999999999999999999999999999999964322 22221111 111112234457789999999999999


Q ss_pred             CCCCCChhhhhcCccc
Q psy14555         80 PDKRATAGELLEDPFL   95 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~   95 (222)
                      |.+||++.+++.||||
T Consensus       241 P~~Rps~~~il~~~~~  256 (256)
T cd06612         241 PEERPSAIQLLQHPFI  256 (256)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.71  E-value=2.8e-17  Score=137.03  Aligned_cols=97  Identities=21%  Similarity=0.304  Sum_probs=71.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccC-------------------C---
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKM-------------------H---   57 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~-------------------~---   57 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|+.||..... ......... .+.                   .   
T Consensus       188 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (364)
T cd07875         188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY  266 (364)
T ss_pred             cCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCc
Confidence            5789999999999999999999999999999999999974321 111111000 000                   0   


Q ss_pred             -----------------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         58 -----------------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        58 -----------------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                       .......+..+.+|+.+||..||.+|||+.+++.||||...
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~  324 (364)
T cd07875         267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  324 (364)
T ss_pred             CCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence                             00011235678999999999999999999999999999743

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.70  E-value=1.6e-17  Score=136.46  Aligned_cols=102  Identities=21%  Similarity=0.358  Sum_probs=80.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|.+||...  .......... ......|..++..+.+++.+||..+|
T Consensus       164 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~--~~~~~~~~i~-~~~~~~p~~~~~~~~~li~~~l~~~p  240 (323)
T cd05615         164 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE--DEDELFQSIM-EHNVSYPKSLSKEAVSICKGLMTKHP  240 (323)
T ss_pred             CccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHH-hCCCCCCccCCHHHHHHHHHHcccCH
Confidence            56899999999999999999999999999999999999743  2222222221 22334566789999999999999999


Q ss_pred             CCCCCh-----hhhhcCccccccccccCCC
Q psy14555         81 DKRATA-----GELLEDPFLADLTATRSSS  105 (222)
Q Consensus        81 ~~R~s~-----~~~l~h~~~~~~~~~~~~~  105 (222)
                      .+|++.     .+++.||||....+.....
T Consensus       241 ~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~  270 (323)
T cd05615         241 SKRLGCGPEGERDIREHAFFRRIDWDKLEN  270 (323)
T ss_pred             hhCCCCCCCCHHHHhcCcccCCCCHHHHhc
Confidence            999974     6899999999876654433

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.70  E-value=2.8e-17  Score=131.04  Aligned_cols=94  Identities=34%  Similarity=0.707  Sum_probs=75.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..++.++|+||+||++|++++|++||... ...............+..+..++..+++++ +||..+|
T Consensus       172 ~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p  249 (266)
T cd06651         172 TPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY-EAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEA  249 (266)
T ss_pred             cccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc-chHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCCh
Confidence            35799999999989999999999999999999999999653 222333333333334555667788999998 6777899


Q ss_pred             CCCCChhhhhcCcccc
Q psy14555         81 DKRATAGELLEDPFLA   96 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~   96 (222)
                      .+||++++++.||||.
T Consensus       250 ~~Rp~~~eil~hp~~~  265 (266)
T cd06651         250 RHRPSAEELLRHPFAQ  265 (266)
T ss_pred             hhCcCHHHHhcCcccc
Confidence            9999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.70  E-value=2.3e-17  Score=132.92  Aligned_cols=97  Identities=35%  Similarity=0.492  Sum_probs=74.1

Q ss_pred             CcceecCcccCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC----CCCccccHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNS---SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP----EIPAELSDKAKQFIL   73 (222)
Q Consensus         1 t~~y~aPe~~~~~---~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~   73 (222)
                      |..|+|||.+.+.   .|+.++|+||+||++|+|++|++||............. .....+    ..+..++..+.+|+.
T Consensus       170 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~  248 (288)
T cd06616         170 CRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV-VKGDPPILSNSEEREFSPSFVNFIN  248 (288)
T ss_pred             ccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh-cCCCCCcCCCcCCCccCHHHHHHHH
Confidence            4679999988776   68999999999999999999999996432211222211 111111    122347889999999


Q ss_pred             HhcccCCCCCCChhhhhcCcccccc
Q psy14555         74 RCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        74 ~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +||..+|.+||++.+++.||||+..
T Consensus       249 ~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         249 LCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             HHccCChhhCcCHHHHhcChhhhch
Confidence            9999999999999999999999764

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.70  E-value=3.1e-17  Score=131.85  Aligned_cols=94  Identities=30%  Similarity=0.511  Sum_probs=71.6

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |..|+|||.+.     ...|+.++|+||+||++|+|++|.+||.... ....................++..+.+|+.+|
T Consensus       184 ~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  262 (282)
T cd06636         184 TPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPPPKLKSKKWSKKFIDFIEGC  262 (282)
T ss_pred             cccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC-HHhhhhhHhhCCCCCCcccccCHHHHHHHHHH
Confidence            45799999876     4568889999999999999999999996432 22222222221122222345788999999999


Q ss_pred             cccCCCCCCChhhhhcCccc
Q psy14555         76 FEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~   95 (222)
                      |..+|.+||++.+++.||||
T Consensus       263 l~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         263 LVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             hCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=3.5e-17  Score=131.01  Aligned_cols=96  Identities=32%  Similarity=0.578  Sum_probs=75.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCcc-ccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-LSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~   79 (222)
                      |..|++||++.+..++.++|+||+||++|+|++|.+||.... .. ...........+..+.. ++..+.+++.+||..+
T Consensus       161 ~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  238 (274)
T cd06609         161 TPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH-PM-RVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKD  238 (274)
T ss_pred             CccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc-hH-HHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCC
Confidence            456999999999999999999999999999999999996432 22 22222222233333333 7889999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++++++.||||...
T Consensus       239 p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         239 PKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             hhhCcCHHHHhhChhhcCC
Confidence            9999999999999999753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.70  E-value=3.1e-17  Score=137.64  Aligned_cols=101  Identities=22%  Similarity=0.406  Sum_probs=75.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhc--
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCF--   76 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l--   76 (222)
                      |+.|+|||.+.+..|+.++||||+||++|||++|.+||.... ............  ...+.+..++.++++|+.+|+  
T Consensus       211 t~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~  289 (381)
T cd05626         211 TPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPT-PTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCS  289 (381)
T ss_pred             CccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCC-HHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccC
Confidence            568999999999999999999999999999999999997532 222222222111  122223357899999999855  


Q ss_pred             ccCCCCCCChhhhhcCcccccccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADLTATR  102 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~~~~~  102 (222)
                      ..++..|+++.+++.||||....+..
T Consensus       290 ~~~~~~R~~~~~~l~hp~f~~~~~~~  315 (381)
T cd05626         290 AEERLGRNGADDIKAHPFFSEVDFSS  315 (381)
T ss_pred             cccccCCCCHHHHhcCcccCCCChhH
Confidence            45556699999999999998866543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.7e-17  Score=136.79  Aligned_cols=101  Identities=22%  Similarity=0.424  Sum_probs=77.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--C-CCCCC---ccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--M-HPEIP---AELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~-~~~~~---~~~~~~~~~li~~   74 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||... .............  . .+...   ..++.++.+|+.+
T Consensus       161 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~  239 (333)
T cd05600         161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS-TPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITK  239 (333)
T ss_pred             CccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC-CHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHH
Confidence            57899999999999999999999999999999999999743 2222221111111  1 11111   2568999999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADLTATR  102 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~~~~~  102 (222)
                      ||..+|.+||++.+++.||||....+..
T Consensus       240 ~l~~~~~rr~s~~~ll~h~~~~~~~~~~  267 (333)
T cd05600         240 LINDPSRRFGSLEDIKNHPFFKEVDWNE  267 (333)
T ss_pred             HhhChhhhcCCHHHHHhCcccCCCCHHH
Confidence            9999999999999999999999765443

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.70  E-value=4e-17  Score=131.21  Aligned_cols=102  Identities=22%  Similarity=0.365  Sum_probs=79.3

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.++ .|+.++|+||+||++|+|++|..||......................|...+..+.+++.+||..+
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~  237 (278)
T cd05606         158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD  237 (278)
T ss_pred             CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcC
Confidence            5679999988754 689999999999999999999999964322122222222233345566677999999999999999


Q ss_pred             CCCCC-----ChhhhhcCcccccccccc
Q psy14555         80 PDKRA-----TAGELLEDPFLADLTATR  102 (222)
Q Consensus        80 p~~R~-----s~~~~l~h~~~~~~~~~~  102 (222)
                      |.+|+     ++.+++.||||....+..
T Consensus       238 p~~R~~~~~~~~~~ll~~~~~~~~~~~~  265 (278)
T cd05606         238 VNRRLGCLGRGAQEVKEHPFFRSLDWQM  265 (278)
T ss_pred             HHhccCCCCCCHHHHHhCccccCCCchH
Confidence            99999     999999999998765443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.70  E-value=3.4e-17  Score=131.65  Aligned_cols=97  Identities=32%  Similarity=0.553  Sum_probs=74.1

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~   74 (222)
                      |..|+|||++.     +..++.++|+||+||++|+|++|.+||.... ......... ........+..++..+.+|+.+
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (282)
T cd06643         166 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN-PMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKK  244 (282)
T ss_pred             cccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC-HHHHHHHHhhcCCCCCCCccccCHHHHHHHHH
Confidence            46799999873     4557889999999999999999999996532 222222221 1122223455678999999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||..+|.+||++.+++.||||...
T Consensus       245 ~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         245 CLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HccCChhhCcCHHHHhcCCCEecc
Confidence            999999999999999999999753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.5e-17  Score=137.83  Aligned_cols=100  Identities=23%  Similarity=0.332  Sum_probs=77.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.... ..........  .....+....+++.+.+|+.+||. 
T Consensus       193 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-  270 (350)
T cd05573         193 TPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT-LQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-  270 (350)
T ss_pred             CccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC-HHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-
Confidence            578999999999999999999999999999999999997532 2222222222  111222223369999999999997 


Q ss_pred             CCCCCCC-hhhhhcCcccccccccc
Q psy14555         79 DPDKRAT-AGELLEDPFLADLTATR  102 (222)
Q Consensus        79 ~p~~R~s-~~~~l~h~~~~~~~~~~  102 (222)
                      +|.+|++ +.+++.||||....+..
T Consensus       271 dp~~R~~s~~~ll~hp~~~~~~~~~  295 (350)
T cd05573         271 DPEDRLGSFEEIKSHPFFKGIDWEN  295 (350)
T ss_pred             ChhhcCCCHHHHhcCCCcCCCCHHH
Confidence            9999999 99999999999866543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.70  E-value=3e-17  Score=134.20  Aligned_cols=95  Identities=23%  Similarity=0.426  Sum_probs=67.2

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--------HHHHHHh-hhccCC-----------C-
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSP--------QAALYRV-GFHKMH-----------P-   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--------~~~~~~~-~~~~~~-----------~-   58 (222)
                      |+.|+|||++.+ ..|+.++|+||+||++|+|++|.+||......        ....... ...+.+           + 
T Consensus       178 t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (317)
T cd07868         178 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPE  257 (317)
T ss_pred             cccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccc
Confidence            567999998876 46899999999999999999999999632210        0000000 000000           0 


Q ss_pred             -----------------------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 -----------------------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 -----------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                                             ......+..+.+|+.+||..||.+|+|++++++||||
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         258 HSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                                   0001234578899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=5e-17  Score=132.79  Aligned_cols=103  Identities=20%  Similarity=0.308  Sum_probs=78.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||++.+..++.++|+||+|+++|+|++|..||..... ....................+..+.+++.+||..+|
T Consensus       195 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  273 (316)
T cd05574         195 TEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR-DETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDP  273 (316)
T ss_pred             ccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch-HHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCH
Confidence            3569999999999999999999999999999999999975322 222222222222222222368999999999999999


Q ss_pred             CCCCC----hhhhhcCccccccccccCC
Q psy14555         81 DKRAT----AGELLEDPFLADLTATRSS  104 (222)
Q Consensus        81 ~~R~s----~~~~l~h~~~~~~~~~~~~  104 (222)
                      .+||+    +.+++.||||++..+....
T Consensus       274 ~~R~s~~~~~~~ll~~~~~~~~~~~~~~  301 (316)
T cd05574         274 SKRLGSKRGAAEIKQHPFFRGVNWALIR  301 (316)
T ss_pred             hHCCCchhhHHHHHcCchhhcCChhhcc
Confidence            99999    9999999999986655433

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.70  E-value=3.9e-17  Score=136.61  Aligned_cols=100  Identities=23%  Similarity=0.333  Sum_probs=75.5

Q ss_pred             CcceecCcccCCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC--ccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNS----SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~----~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~   74 (222)
                      |+.|+|||.+.+.    .|+.++|+||+||++|+|++|.+||.... .................|  ..++..+.+|+.+
T Consensus       206 t~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  284 (370)
T cd05596         206 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMDHKNSLTFPDDIEISKQAKDLICA  284 (370)
T ss_pred             CcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-HHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHH
Confidence            5789999987653    48899999999999999999999997432 222222221222222233  3579999999999


Q ss_pred             hcccCCCC--CCChhhhhcCccccccccc
Q psy14555         75 CFEKDPDK--RATAGELLEDPFLADLTAT  101 (222)
Q Consensus        75 ~l~~~p~~--R~s~~~~l~h~~~~~~~~~  101 (222)
                      ||..+|.+  |+++.+++.||||+...+.
T Consensus       285 ~L~~~p~r~~R~s~~ell~h~~~~~~~~~  313 (370)
T cd05596         285 FLTDREVRLGRNGVDEIKSHPFFKNDQWT  313 (370)
T ss_pred             HccChhhccCCCCHHHHhcCcccCCCChh
Confidence            99999987  9999999999999875543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PHA02988 hypothetical protein; Provisional

Probab=99.70  E-value=3.7e-17  Score=131.90  Aligned_cols=90  Identities=27%  Similarity=0.357  Sum_probs=71.4

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+.+  ..|+.++||||+||++|||++|..||... ...............+..+...+..+++|+.+||..
T Consensus       183 ~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~  261 (283)
T PHA02988        183 FMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL-TTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSH  261 (283)
T ss_pred             cccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcC
Confidence            568999998876  78999999999999999999999999753 222222222223344455656789999999999999


Q ss_pred             CCCCCCChhhhhc
Q psy14555         79 DPDKRATAGELLE   91 (222)
Q Consensus        79 ~p~~R~s~~~~l~   91 (222)
                      +|.+||++.+++.
T Consensus       262 dp~~Rps~~ell~  274 (283)
T PHA02988        262 DSIKRPNIKEILY  274 (283)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999875

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.70  E-value=3.8e-17  Score=132.53  Aligned_cols=97  Identities=33%  Similarity=0.608  Sum_probs=76.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-CCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||...+..++.++|+||+||++|+|++|++||.... ............ .....+..++..+.+++.+||..+
T Consensus       179 ~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  257 (296)
T cd06654         179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN-PLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMD  257 (296)
T ss_pred             CccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC-HHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCC
Confidence            457999999999899999999999999999999999997432 222222221111 122334567889999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.|+||...
T Consensus       258 p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         258 VEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             cccCcCHHHHhhChhhhcc
Confidence            9999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0579|consensus

Probab=99.70  E-value=3.6e-17  Score=139.20  Aligned_cols=97  Identities=32%  Similarity=0.572  Sum_probs=78.8

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~   74 (222)
                      |++|||||++.     ...|+.++||||||+.|.||..+.||-++++ +.-.++++.. .+...-.|..++..+.+|+++
T Consensus       193 TPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-pMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~  271 (1187)
T KOG0579|consen  193 TPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-PMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKR  271 (1187)
T ss_pred             CcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc-hHHHHHHHhhcCCCcccCcchhhhHHHHHHHH
Confidence            89999999654     5679999999999999999999999987653 3333333322 223334577889999999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||.++|..||++++++.|||+...
T Consensus       272 cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  272 CLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             HHhcCCccCCCHHHHhhCcccccC
Confidence            999999999999999999999854

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.70  E-value=5.1e-17  Score=129.20  Aligned_cols=98  Identities=30%  Similarity=0.540  Sum_probs=76.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHhhhccCCCCCCcc-ccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS---PQAALYRVGFHKMHPEIPAE-LSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l   76 (222)
                      |..|++||.+.+..++.++|+||+|+++|+|++|..||.....   ..............+..+.. ++..+.+++.+||
T Consensus       162 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  241 (265)
T cd06605         162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCL  241 (265)
T ss_pred             ChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHc
Confidence            4579999999999999999999999999999999999964321   11112222222333334433 7889999999999


Q ss_pred             ccCCCCCCChhhhhcCcccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..+|.+||++.+++.||||+..
T Consensus       242 ~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         242 IKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             CCCchhCcCHHHHhhCchhhcc
Confidence            9999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.70  E-value=5.9e-17  Score=129.06  Aligned_cols=92  Identities=42%  Similarity=0.741  Sum_probs=75.7

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      ..|++||.+.+..++.++|+||+||++|+|++|..||.... ....+... .....+..+..++..+.+++.+||..+|.
T Consensus       176 ~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~  253 (267)
T cd06628         176 VFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT-QLQAIFKI-GENASPEIPSNISSEAIDFLEKTFEIDHN  253 (267)
T ss_pred             cCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc-HHHHHHHH-hccCCCcCCcccCHHHHHHHHHHccCCch
Confidence            56999999999999999999999999999999999997532 22222222 22344556677899999999999999999


Q ss_pred             CCCChhhhhcCccc
Q psy14555         82 KRATAGELLEDPFL   95 (222)
Q Consensus        82 ~R~s~~~~l~h~~~   95 (222)
                      +||++.+++.||||
T Consensus       254 ~Rp~~~~il~~~~~  267 (267)
T cd06628         254 KRPTAAELLKHPFL  267 (267)
T ss_pred             hCcCHHHHhhCCCC
Confidence            99999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.69  E-value=6.8e-17  Score=130.59  Aligned_cols=99  Identities=31%  Similarity=0.577  Sum_probs=74.2

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~   74 (222)
                      |..|+|||.+.     ...|+.++|+||+||++|+|++|.+||.... ........... ......+..++.++.+++.+
T Consensus       173 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  251 (292)
T cd06644         173 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-PMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKT  251 (292)
T ss_pred             CccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc-HHHHHHHHhcCCCccCCCCcccCHHHHHHHHH
Confidence            45799999874     4457889999999999999999999996432 22222222111 11122345678899999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                      ||..+|.+||++.+++.||||....+
T Consensus       252 ~l~~~p~~Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         252 ALDKHPETRPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             HhcCCcccCcCHHHHhcCcccccccc
Confidence            99999999999999999999976543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.69  E-value=4.8e-17  Score=135.65  Aligned_cols=102  Identities=26%  Similarity=0.387  Sum_probs=74.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC--ccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||... ..................|  ..++.++++++.+++..
T Consensus       199 t~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~  277 (363)
T cd05628         199 TPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE-TPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCE  277 (363)
T ss_pred             CccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999999743 2222222222111111222  34689999999986652


Q ss_pred             --CCCCCCChhhhhcCccccccccccC
Q psy14555         79 --DPDKRATAGELLEDPFLADLTATRS  103 (222)
Q Consensus        79 --~p~~R~s~~~~l~h~~~~~~~~~~~  103 (222)
                        ++..||+++++++||||++..|...
T Consensus       278 ~~~r~~r~~~~ei~~hp~f~~~~~~~~  304 (363)
T cd05628         278 WEHRIGAPGVEEIKTNPFFEGVDWEHI  304 (363)
T ss_pred             hhhcCCCCCHHHHhCCCCCCCCCHHHH
Confidence              2335689999999999998776554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.69  E-value=6.9e-17  Score=127.70  Aligned_cols=93  Identities=28%  Similarity=0.459  Sum_probs=75.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ++.|+|||+..++.++.++|+||+||++|+|++|..||...  ..............+..+..++..+.+++.+||..+|
T Consensus       164 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  241 (256)
T cd08529         164 TPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN--NQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDY  241 (256)
T ss_pred             CccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCc
Confidence            35699999999999999999999999999999999999643  2233333333333444555678999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      ++||++.+++.|||+
T Consensus       242 ~~Rp~~~~ll~~~~~  256 (256)
T cd08529         242 RQRPDTFQLLRNPSL  256 (256)
T ss_pred             ccCcCHHHHhhCCCC
Confidence            999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.69  E-value=4e-17  Score=134.21  Aligned_cols=97  Identities=24%  Similarity=0.444  Sum_probs=70.9

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC---------------------
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---------------------   57 (222)
                      |..|+|||++.+  ..|+.++|+||+||++|+|++|..||........ .........+                     
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (327)
T cd08227         171 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLLDTTTIPAEELTMKPSRSG  249 (327)
T ss_pred             eecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH-HHHHhcCCccccccccchhhhhcccCCcccC
Confidence            356999999876  4699999999999999999999999964322111 1111000000                     


Q ss_pred             -----------------------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         58 -----------------------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        58 -----------------------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                             .+....+++.+.+|+.+||+.||.+|||++++++||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         250 ANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             CcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence                                   00112356789999999999999999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.69  E-value=6.3e-17  Score=128.11  Aligned_cols=93  Identities=25%  Similarity=0.481  Sum_probs=76.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||+..++.++.++|+||+||++|+|++|..||.. ..... ..........+..+..++.++.+++.+||..+|
T Consensus       164 ~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (256)
T cd08218         164 TPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEA-GNMKN-LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNP  241 (256)
T ss_pred             CccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccC-CCHHH-HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCCh
Confidence            3569999999999999999999999999999999999964 23222 222223344445566789999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.||||
T Consensus       242 ~~Rp~~~~vl~~~~~  256 (256)
T cd08218         242 RDRPSVNSILEKNFI  256 (256)
T ss_pred             hhCcCHHHHhhCcCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.69  E-value=7.8e-17  Score=130.12  Aligned_cols=95  Identities=27%  Similarity=0.560  Sum_probs=70.9

Q ss_pred             CcceecCcccCCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNS-----SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~-----~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~   74 (222)
                      |..|++||.+...     .++.++|+||+||++|+|++|++||.... ........... ......+...+..+.+++.+
T Consensus       191 ~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  269 (291)
T cd06639         191 TPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH-PVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQ  269 (291)
T ss_pred             CccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc-HHHHHHHHhcCCCCCCCcccccCHHHHHHHHH
Confidence            3579999987543     36899999999999999999999997532 22222222111 11112244567889999999


Q ss_pred             hcccCCCCCCChhhhhcCcccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~   96 (222)
                      ||..+|.+||++.+++.||||+
T Consensus       270 ~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         270 CLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HhhcChhhCcCHHHHhcCcccC
Confidence            9999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.68  E-value=8.5e-17  Score=128.60  Aligned_cols=95  Identities=22%  Similarity=0.314  Sum_probs=74.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH--HHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA--ALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||++.+..|+.++|+||+||++|+|++|..||........  ....... ......+...+..+.+|+.+||+.
T Consensus       169 ~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~  247 (267)
T PHA03390        169 TLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKY  247 (267)
T ss_pred             CCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHHHHhcc
Confidence            4679999999999999999999999999999999999964322111  1111111 223344557899999999999999


Q ss_pred             CCCCCCC-hhhhhcCcccc
Q psy14555         79 DPDKRAT-AGELLEDPFLA   96 (222)
Q Consensus        79 ~p~~R~s-~~~~l~h~~~~   96 (222)
                      +|.+|++ ++++++||||.
T Consensus       248 ~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        248 NINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             ChhhCCchHHHHhcCCccc
Confidence            9999996 69999999996

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=1.1e-17  Score=137.61  Aligned_cols=98  Identities=30%  Similarity=0.516  Sum_probs=74.9

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC-ccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP-AELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+.+. .|+.++|+||+||++|+|++|..||...  ............. ...+ ..++..+.+|+.+||..
T Consensus       159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~--~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~~L~~  235 (330)
T cd05586         159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE--DTQQMYRNIAFGK-VRFPKNVLSDEGRQFVKGLLNR  235 (330)
T ss_pred             CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC--CHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCC
Confidence            5689999988654 5899999999999999999999999642  2233222222221 1222 34789999999999999


Q ss_pred             CCCCCC----ChhhhhcCccccccccc
Q psy14555         79 DPDKRA----TAGELLEDPFLADLTAT  101 (222)
Q Consensus        79 ~p~~R~----s~~~~l~h~~~~~~~~~  101 (222)
                      +|.+|+    ++.+++.||||....+.
T Consensus       236 ~P~~R~~~~~~~~~ll~h~~~~~~~~~  262 (330)
T cd05586         236 NPQHRLGAHRDAVELKEHPFFADIDWD  262 (330)
T ss_pred             CHHHCCCCCCCHHHHhcCccccCCCHH
Confidence            999998    68999999999875543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.68  E-value=8.8e-17  Score=131.07  Aligned_cols=98  Identities=20%  Similarity=0.366  Sum_probs=71.6

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--------------------CCC-
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--------------------MHP-   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--------------------~~~-   58 (222)
                      |..|+|||.+.+ ..|+.++|+||+||++|+|++|++||................+                    .+. 
T Consensus       167 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (309)
T cd07872         167 TLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKY  246 (309)
T ss_pred             cccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCcc
Confidence            567999998765 5689999999999999999999999975322111110000000                    000 


Q ss_pred             ------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 ------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                            .....++.++++|+.+||..+|.+|+++.+++.||||+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         247 KPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             CCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence                  0112467889999999999999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.68  E-value=5.9e-17  Score=134.65  Aligned_cols=97  Identities=23%  Similarity=0.328  Sum_probs=72.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh----------------------c--c-
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF----------------------H--K-   55 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~----------------------~--~-   55 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|+.||.+... .........                      .  . 
T Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (355)
T cd07874         181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY  259 (355)
T ss_pred             cCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcc
Confidence            5789999999999999999999999999999999999974321 111100000                      0  0 


Q ss_pred             ---------------CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 ---------------MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 ---------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                     .....+...+..+++|+.+||..+|.+|||+.+++.||||...
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             ccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence                           0001112245678999999999999999999999999999743

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=3.3e-17  Score=136.53  Aligned_cols=99  Identities=25%  Similarity=0.410  Sum_probs=76.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCC--CccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|.+||... ..................  ...+++.+++|+.+|+. 
T Consensus       202 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-  279 (364)
T cd05599         202 TPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSD-NPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-  279 (364)
T ss_pred             CccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCC-CHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-
Confidence            56899999999999999999999999999999999999743 222222222111111222  23568999999999996 


Q ss_pred             CCCCCCC---hhhhhcCccccccccc
Q psy14555         79 DPDKRAT---AGELLEDPFLADLTAT  101 (222)
Q Consensus        79 ~p~~R~s---~~~~l~h~~~~~~~~~  101 (222)
                      +|.+|++   +.+++.||||++..+.
T Consensus       280 ~p~~R~~~~~~~~ll~h~~~~~~~~~  305 (364)
T cd05599         280 EAERRLGNNGVNEIKSHPFFKGVDWE  305 (364)
T ss_pred             CHhhcCCCCCHHHHhcCCCcCCCCHH
Confidence            8999987   9999999999887654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.68  E-value=6.4e-17  Score=139.60  Aligned_cols=95  Identities=25%  Similarity=0.356  Sum_probs=78.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|..||...  ....+..........+.+..++..+.+++.+||..+|
T Consensus       234 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  311 (478)
T PTZ00267        234 TPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP--SQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNP  311 (478)
T ss_pred             CccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccCh
Confidence            56799999999999999999999999999999999999642  2333333323333344566788999999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+||++.+++.|+|++.
T Consensus       312 ~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        312 ALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             hhCcCHHHHHhCHHHHH
Confidence            99999999999999864

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.68  E-value=1.7e-17  Score=138.27  Aligned_cols=101  Identities=29%  Similarity=0.452  Sum_probs=76.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC--ccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++|+||+||++|||++|.+||... ..................|  ..++..+++|+.+++ .
T Consensus       199 t~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~  276 (360)
T cd05627         199 TPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE-TPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-T  276 (360)
T ss_pred             CccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCC-CHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-c
Confidence            56799999999999999999999999999999999999743 2222222221111111222  246899999999977 4


Q ss_pred             CCCCCC---ChhhhhcCccccccccccC
Q psy14555         79 DPDKRA---TAGELLEDPFLADLTATRS  103 (222)
Q Consensus        79 ~p~~R~---s~~~~l~h~~~~~~~~~~~  103 (222)
                      +|.+|+   ++.+++.||||.+..|...
T Consensus       277 ~p~~R~~~~~~~ei~~hp~f~~~~~~~~  304 (360)
T cd05627         277 DSENRIGSNGVEEIKSHPFFEGVDWGHI  304 (360)
T ss_pred             ChhhcCCCCCHHHHhcCCCCCCCCHHHH
Confidence            999998   4789999999998776554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.68  E-value=1.4e-16  Score=126.22  Aligned_cols=93  Identities=31%  Similarity=0.475  Sum_probs=77.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||.+.+..++.++|+||+|+++|+|++|..||....  .............+..+...+..+.+++.+||..+|
T Consensus       173 ~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p  250 (265)
T cd08217         173 TPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDP  250 (265)
T ss_pred             CCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCc
Confidence            467999999999999999999999999999999999997432  333333334444455667788999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.|||+
T Consensus       251 ~~Rp~~~~il~~~~~  265 (265)
T cd08217         251 DKRPSTEELLQLPLI  265 (265)
T ss_pred             ccCCCHHHHhhCCCC
Confidence            999999999999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.68  E-value=8e-17  Score=134.74  Aligned_cols=98  Identities=23%  Similarity=0.410  Sum_probs=72.4

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-----------------------hccC
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-----------------------FHKM   56 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-----------------------~~~~   56 (222)
                      |..|+|||.+.+. .|+.++||||+||++|+|++|++||..... ........                       ....
T Consensus       167 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  245 (372)
T cd07853         167 TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP-IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPH  245 (372)
T ss_pred             CCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCC
Confidence            4679999987764 589999999999999999999999974322 11111000                       0000


Q ss_pred             CC-------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         57 HP-------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        57 ~~-------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      .+       ......+.++.+|+.+||..||.+||++.+++.||||.+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         246 KPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR  295 (372)
T ss_pred             CCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence            00       12234578899999999999999999999999999998753

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.68  E-value=1.2e-16  Score=126.27  Aligned_cols=93  Identities=25%  Similarity=0.426  Sum_probs=75.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..++.++|+||+|+++|+|++|..||... ... ..............+..++..+.+++.+||..+|
T Consensus       164 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  241 (256)
T cd08220         164 TPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA-NLP-ALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDP  241 (256)
T ss_pred             CCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC-chH-HHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCCh
Confidence            35799999999989999999999999999999999999643 222 2222222333344556689999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.||||
T Consensus       242 ~~Rpt~~~ll~~p~~  256 (256)
T cd08220         242 SKRPQLSQIMAQPIC  256 (256)
T ss_pred             hhCCCHHHHhhCCCC
Confidence            999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0667|consensus

Probab=99.68  E-value=7e-17  Score=137.51  Aligned_cols=98  Identities=27%  Similarity=0.453  Sum_probs=72.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC----------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP----------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~----------------------   58 (222)
                      +..|-|||++++..|+.+.|+||||||++||++|.|.|++.+..+.........+.++                      
T Consensus       351 SRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~  430 (586)
T KOG0667|consen  351 SRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPR  430 (586)
T ss_pred             ccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCcee
Confidence            3579999999999999999999999999999999999986433222211111111000                      


Q ss_pred             ---------------------------CCC-----------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 ---------------------------EIP-----------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ---------------------------~~~-----------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                                 ..|           ..-...+.+|+++||.+||.+|+|+.++++||||++.
T Consensus       431 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  431 LCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             eeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence                                       011           0112446899999999999999999999999999864

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.68  E-value=1.1e-16  Score=127.23  Aligned_cols=100  Identities=22%  Similarity=0.396  Sum_probs=79.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||.+....++.++|+||+|+++|++++|..||............... .......|...+..+.+++.+||..+
T Consensus       155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  234 (262)
T cd05572         155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRN  234 (262)
T ss_pred             CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCC
Confidence            45799999988889999999999999999999999999643321223222222 23344555566899999999999999


Q ss_pred             CCCCCC-----hhhhhcCcccccccc
Q psy14555         80 PDKRAT-----AGELLEDPFLADLTA  100 (222)
Q Consensus        80 p~~R~s-----~~~~l~h~~~~~~~~  100 (222)
                      |.+|++     +.++++||||....|
T Consensus       235 p~~R~~~~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         235 PEERLGNLKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             hhhCcCCcccCHHHHhcChhhhCCCC
Confidence            999999     999999999987654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.68  E-value=9.2e-17  Score=132.49  Aligned_cols=98  Identities=26%  Similarity=0.478  Sum_probs=72.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHH-------------------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY-------------------------------   49 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~-------------------------------   49 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|+.||...........                               
T Consensus       165 ~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (333)
T cd06650         165 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPD  244 (333)
T ss_pred             CccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhccc
Confidence            5689999999999999999999999999999999999963211111000                               


Q ss_pred             -----------HhhhccCCCCCC-ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         50 -----------RVGFHKMHPEIP-AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        50 -----------~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                 ........+..+ ...+.++++|+.+||..+|.+||++.+++.|+||+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         245 SRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             ccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence                       000011111111 1357789999999999999999999999999999753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=8.5e-17  Score=128.30  Aligned_cols=94  Identities=33%  Similarity=0.616  Sum_probs=70.0

Q ss_pred             CcceecCcccCC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC-CCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVN-----SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM-HPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~-----~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~   74 (222)
                      |..|+|||.+..     ..|+.++|+||+||++|+|++|.+||... .............. ....+..++..+.+|+.+
T Consensus       176 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  254 (275)
T cd06608         176 TPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM-HPMRALFKIPRNPPPTLKSPENWSKKFNDFISE  254 (275)
T ss_pred             cccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc-chHHHHHHhhccCCCCCCchhhcCHHHHHHHHH
Confidence            457999997653     35788999999999999999999999643 22222222211111 112223467899999999


Q ss_pred             hcccCCCCCCChhhhhcCccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~   95 (222)
                      ||..+|.+||++.+++.|||+
T Consensus       255 ~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         255 CLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HhhcChhhCcCHHHHhcCCCC
Confidence            999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.68  E-value=1.1e-16  Score=128.50  Aligned_cols=102  Identities=28%  Similarity=0.436  Sum_probs=79.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-QAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||+..++.++.++|+||+||++|+|++|+.||...... ................+..+++.+.+++.+||..+|
T Consensus       158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  237 (277)
T cd05577         158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDP  237 (277)
T ss_pred             CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCCh
Confidence            5799999998888999999999999999999999999643221 111111122233344556679999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRS  103 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~  103 (222)
                      .+||     ++.+++.||||...++...
T Consensus       238 ~~R~~~~~~~~~~ll~h~~~~~~~~~~~  265 (277)
T cd05577         238 EKRLGCRGGSADEVREHPLFKDLNWRRL  265 (277)
T ss_pred             hHccCCCcccHHHHHhChhhhcCChhhh
Confidence            9999     7888999999987766544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.68  E-value=8.3e-17  Score=127.92  Aligned_cols=93  Identities=31%  Similarity=0.520  Sum_probs=71.5

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC-----ccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP-----AELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~   74 (222)
                      |..|++||++... .++.++|+||+||++|+|++|+.||..... ........ ....+..+     ..++..+.+++.+
T Consensus       169 ~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~  246 (267)
T cd06610         169 TPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP-MKVLMLTL-QNDPPSLETGADYKKYSKSFRKMISL  246 (267)
T ss_pred             ChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh-hhhHHHHh-cCCCCCcCCccccccccHHHHHHHHH
Confidence            4579999988777 789999999999999999999999964322 22222221 11111111     2567899999999


Q ss_pred             hcccCCCCCCChhhhhcCccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~   95 (222)
                      ||..+|.+||++.+++.||||
T Consensus       247 ~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         247 CLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HcCCChhhCcCHHHHhhCCCC
Confidence            999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.68  E-value=4.5e-17  Score=136.69  Aligned_cols=99  Identities=25%  Similarity=0.480  Sum_probs=76.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC--CCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--HPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||... ..............  ..+....+++++.+++.+|+ .
T Consensus       211 t~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~  288 (382)
T cd05625         211 TPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ-TPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-R  288 (382)
T ss_pred             CcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCC-CHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-c
Confidence            56799999999999999999999999999999999999753 22222222222112  22223467899999999976 5


Q ss_pred             CCCCCCC---hhhhhcCccccccccc
Q psy14555         79 DPDKRAT---AGELLEDPFLADLTAT  101 (222)
Q Consensus        79 ~p~~R~s---~~~~l~h~~~~~~~~~  101 (222)
                      +|.+|++   +.+++.||||+...+.
T Consensus       289 ~p~~R~~~~~~~ei~~hp~f~~~~~~  314 (382)
T cd05625         289 GPEDRLGKNGADEIKAHPFFKTIDFS  314 (382)
T ss_pred             CHhHcCCCCCHHHHhcCCCcCCcChH
Confidence            9999987   9999999999886554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=9.4e-17  Score=128.87  Aligned_cols=97  Identities=35%  Similarity=0.610  Sum_probs=73.6

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~   74 (222)
                      |+.|++||.+.     ...++.++|+||+||++|+|++|.+||.... ........... ......+..++..+.+++.+
T Consensus       166 ~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (280)
T cd06611         166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN-PMRVLLKILKSEPPTLDQPSKWSSSFNDFLKS  244 (280)
T ss_pred             chhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC-HHHHHHHHhcCCCCCcCCcccCCHHHHHHHHH
Confidence            46799999864     3457789999999999999999999997532 22222222111 11223355678999999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||..+|.+||++.++++|+||...
T Consensus       245 ~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         245 CLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HhccChhhCcCHHHHhcChhhccc
Confidence            999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.68  E-value=9.7e-17  Score=129.42  Aligned_cols=103  Identities=26%  Similarity=0.400  Sum_probs=79.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH-HHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA-ALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|..||........ ..............+..++..+.+|+.+||..+
T Consensus       164 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05632         164 TVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKD  243 (285)
T ss_pred             CcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCC
Confidence            4689999999999999999999999999999999999974322111 111111222233445667889999999999999


Q ss_pred             CCCCCC-----hhhhhcCccccccccccC
Q psy14555         80 PDKRAT-----AGELLEDPFLADLTATRS  103 (222)
Q Consensus        80 p~~R~s-----~~~~l~h~~~~~~~~~~~  103 (222)
                      |.+||+     +.+++.|+||....+...
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~~~~~~~  272 (285)
T cd05632         244 PKQRLGCQEEGAGEVKRHPFFRNMNFKRL  272 (285)
T ss_pred             HhHcCCCcccChHHHHcChhhhcCCHHHH
Confidence            999999     789999999988755543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.68  E-value=1.3e-16  Score=131.91  Aligned_cols=97  Identities=25%  Similarity=0.368  Sum_probs=70.9

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-cc--------------------CCC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HK--------------------MHP   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~--------------------~~~   58 (222)
                      |..|+|||++.+ ..|+.++||||+||++|+|++|..||..... ......... ..                    ..+
T Consensus       178 t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (343)
T cd07878         178 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-IDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLP  256 (343)
T ss_pred             cccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccc
Confidence            568999998876 5789999999999999999999999964221 111111000 00                    000


Q ss_pred             CC--------CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 EI--------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ~~--------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..        ....++.+.+|+.+||..+|.+||++.+++.||||...
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         257 HMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             cccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence            00        12345678899999999999999999999999999764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.67  E-value=3.5e-17  Score=134.44  Aligned_cols=100  Identities=21%  Similarity=0.364  Sum_probs=79.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||...  .......... ......+..++..+.+++.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~l~~~p  235 (325)
T cd05602         159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--NTAEMYDNIL-NKPLQLKPNITNSARHLLEGLLQKDR  235 (325)
T ss_pred             CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC--CHHHHHHHHH-hCCcCCCCCCCHHHHHHHHHHcccCH
Confidence            57899999999999999999999999999999999999743  2233222222 22233455789999999999999999


Q ss_pred             CCCCChh----hhhcCccccccccccC
Q psy14555         81 DKRATAG----ELLEDPFLADLTATRS  103 (222)
Q Consensus        81 ~~R~s~~----~~l~h~~~~~~~~~~~  103 (222)
                      .+|+++.    ++++|+||....|...
T Consensus       236 ~~R~~~~~~~~~i~~~~~~~~~~~~~~  262 (325)
T cd05602         236 TKRLGAKDDFMEIKNHIFFSPINWDDL  262 (325)
T ss_pred             HHCCCCCCCHHHHhcCcccCCCCHHHH
Confidence            9999876    7899999987665443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.67  E-value=1.2e-16  Score=129.42  Aligned_cols=97  Identities=30%  Similarity=0.543  Sum_probs=75.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC--CCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||...+..++.++|+||+|+++|+|++|..||... ......... ......  ......+..+.+++.+||..
T Consensus       181 ~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~  258 (292)
T cd06658         181 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE-PPLQAMRRI-RDNLPPRVKDSHKVSSVLRGFLDLMLVR  258 (292)
T ss_pred             CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHH-HhcCCCccccccccCHHHHHHHHHHccC
Confidence            45799999999989999999999999999999999999643 222222211 111111  22235688899999999999


Q ss_pred             CCCCCCChhhhhcCccccccc
Q psy14555         79 DPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      +|.+||++.+++.||||....
T Consensus       259 ~P~~Rpt~~~il~~~~~~~~~  279 (292)
T cd06658         259 EPSQRATAQELLQHPFLKLAG  279 (292)
T ss_pred             ChhHCcCHHHHhhChhhhccC
Confidence            999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.67  E-value=2.5e-17  Score=135.28  Aligned_cols=99  Identities=28%  Similarity=0.378  Sum_probs=77.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||++.+..|+.++||||+||++|+|++|.+||...  ............ ....+...+..+.+++.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~ll~~~p  235 (325)
T cd05604         159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR--DVAEMYDNILHK-PLVLRPGASLTAWSILEELLEKDR  235 (325)
T ss_pred             ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC--CHHHHHHHHHcC-CccCCCCCCHHHHHHHHHHhccCH
Confidence            56799999999999999999999999999999999999742  223333322222 223344578999999999999999


Q ss_pred             CCCCCh----hhhhcCcccccccccc
Q psy14555         81 DKRATA----GELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s~----~~~l~h~~~~~~~~~~  102 (222)
                      .+||++    .+++.||||....+..
T Consensus       236 ~~R~~~~~~~~~i~~h~~f~~~~~~~  261 (325)
T cd05604         236 QRRLGAKEDFLEIQEHPFFESLSWTD  261 (325)
T ss_pred             HhcCCCCCCHHHHhcCCCcCCCCHHH
Confidence            999976    4899999998765543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0983|consensus

Probab=99.67  E-value=9.2e-17  Score=124.51  Aligned_cols=96  Identities=29%  Similarity=0.517  Sum_probs=77.4

Q ss_pred             cceecCcccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC--ccccHHHHHHHHHhc
Q psy14555          2 NVIFLTQYSVN---SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILRCF   76 (222)
Q Consensus         2 ~~y~aPe~~~~---~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l   76 (222)
                      ++|||||.+-.   ..|+-.+||||+|+.++||.+|..||.+. ..+-....+.....++.++  ..+|+++.+|+..||
T Consensus       255 ~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c-~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL  333 (391)
T KOG0983|consen  255 AAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC-KTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCL  333 (391)
T ss_pred             ccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC-CccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHh
Confidence            68999997654   47999999999999999999999999853 3333333333334445444  348999999999999


Q ss_pred             ccCCCCCCChhhhhcCcccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ++|+.+||.-.++++|||+...
T Consensus       334 ~kd~r~RP~Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  334 TKDHRKRPKYNKLLEHPFIKRY  355 (391)
T ss_pred             hcCcccCcchHHHhcCcceeec
Confidence            9999999999999999999764

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.67  E-value=1.4e-16  Score=126.01  Aligned_cols=93  Identities=26%  Similarity=0.478  Sum_probs=74.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||+.....++.++|+||+|+++|++++|..||... ........ .........+...+..+.+++.+||..+|
T Consensus       165 ~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  242 (257)
T cd08225         165 TPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLHQLVLK-ICQGYFAPISPNFSRDLRSLISQLFKVSP  242 (257)
T ss_pred             CccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-cHHHHHHH-HhcccCCCCCCCCCHHHHHHHHHHhccCh
Confidence            35799999988889999999999999999999999999642 22222222 22222333445678899999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.||||
T Consensus       243 ~~Rpt~~~ll~~~~~  257 (257)
T cd08225         243 RDRPSITSILKRPFL  257 (257)
T ss_pred             hhCcCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=1.4e-16  Score=134.24  Aligned_cols=98  Identities=21%  Similarity=0.276  Sum_probs=70.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------hHHHHHHh-----------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS------PQAALYRV-----------------------   51 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~------~~~~~~~~-----------------------   51 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|..||.....      ....+...                       
T Consensus       246 t~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~  325 (391)
T PHA03212        246 TIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIY  325 (391)
T ss_pred             ccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHH
Confidence            6789999999999999999999999999999999988743110      00000000                       


Q ss_pred             ---hh--ccCCCCC--C---ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         52 ---GF--HKMHPEI--P---AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        52 ---~~--~~~~~~~--~---~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                         ..  .......  +   ..++.++.+|+.+||..+|.+|||+.+++.||||...
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        326 IGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence               00  0000000  1   1246678999999999999999999999999999763

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.67  E-value=4.7e-17  Score=132.91  Aligned_cols=95  Identities=22%  Similarity=0.386  Sum_probs=66.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHh-hhccC--------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ--------AALYRV-GFHKM--------------   56 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~--------~~~~~~-~~~~~--------------   56 (222)
                      |..|+|||.+.+ ..|+.++||||+||++|+|++|.+||.......        ...... ...+.              
T Consensus       178 t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (317)
T cd07867         178 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPE  257 (317)
T ss_pred             cccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence            567999998876 458999999999999999999999996321100        000000 00000              


Q ss_pred             ---------------------CCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         57 ---------------------HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        57 ---------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                                           ........+..+.+|+.+||..||.+|||+.+++.||||
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         258 YPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             chhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                                 000011235668899999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0580|consensus

Probab=99.67  E-value=8.9e-17  Score=122.14  Aligned_cols=94  Identities=23%  Similarity=0.431  Sum_probs=79.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |.-|.+||.+.+..|+..||+|++|+..||++.|.+||...  .....++. +.......|..++..++++|.+|+..+|
T Consensus       185 t~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~--~~~etYkr-I~k~~~~~p~~is~~a~dlI~~ll~~~p  261 (281)
T KOG0580|consen  185 TLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ--SHSETYKR-IRKVDLKFPSTISGGAADLISRLLVKNP  261 (281)
T ss_pred             ccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhh--hhHHHHHH-HHHccccCCcccChhHHHHHHHHhccCc
Confidence            67899999999999999999999999999999999999642  22332222 3344556678899999999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+|.+..+++.|||+..
T Consensus       262 ~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  262 IERLALTEVMDHPWIVA  278 (281)
T ss_pred             cccccHHHHhhhHHHHh
Confidence            99999999999999864

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.67  E-value=3.7e-17  Score=134.48  Aligned_cols=100  Identities=18%  Similarity=0.255  Sum_probs=75.5

Q ss_pred             CcceecCcccC------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSV------NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~------~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li   72 (222)
                      |+.|+|||++.      ...|+.++||||+||++|+|++|..||... .............  ...+....++..+.+|+
T Consensus       166 t~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  244 (330)
T cd05601         166 TPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG-TSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLI  244 (330)
T ss_pred             CccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCC-CHHHHHHHHHcCCCccCCCCCCCCCHHHHHHH
Confidence            56899999876      567889999999999999999999999642 2222222221111  11122235789999999


Q ss_pred             HHhcccCCCCCCChhhhhcCcccccccccc
Q psy14555         73 LRCFEKDPDKRATAGELLEDPFLADLTATR  102 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h~~~~~~~~~~  102 (222)
                      .+||. +|.+|+++.+++.||||....+..
T Consensus       245 ~~ll~-~p~~R~t~~~l~~h~~~~~~~~~~  273 (330)
T cd05601         245 QSLLC-GQKERLGYEGLCCHPFFSKIDWNN  273 (330)
T ss_pred             HHHcc-ChhhCCCHHHHhCCCCcCCCCHHH
Confidence            99998 999999999999999998765543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.67  E-value=6.4e-17  Score=132.65  Aligned_cols=99  Identities=20%  Similarity=0.335  Sum_probs=78.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|.+||...  .......... ......+...+..+.+++.+||..+|
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~l~~~p  235 (321)
T cd05603         159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR--DVSQMYDNIL-HKPLQLPGGKTVAACDLLVGLLHKDQ  235 (321)
T ss_pred             CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC--CHHHHHHHHh-cCCCCCCCCCCHHHHHHHHHHccCCH
Confidence            56899999999999999999999999999999999999742  2222222222 22345566778999999999999999


Q ss_pred             CCCCCh----hhhhcCcccccccccc
Q psy14555         81 DKRATA----GELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s~----~~~l~h~~~~~~~~~~  102 (222)
                      .+|+++    .+++.|+||....+..
T Consensus       236 ~~R~~~~~~~~~~~~~~~~~~~~~~~  261 (321)
T cd05603         236 RRRLGAKADFLEIKNHVFFSPINWDD  261 (321)
T ss_pred             hhcCCCCCCHHHHhCCCCcCCCCHHH
Confidence            999875    4899999998765543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.67  E-value=2.3e-16  Score=124.43  Aligned_cols=95  Identities=52%  Similarity=0.937  Sum_probs=78.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      +..|++||......++.++|+||+|+++|+|++|..||......................+...+..+.+++.+||..+|
T Consensus       166 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p  245 (260)
T cd06606         166 TPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDP  245 (260)
T ss_pred             CccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCCh
Confidence            45799999998888999999999999999999999999754433333333333344455667779999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.||||
T Consensus       246 ~~Rp~~~~ll~~~~~  260 (260)
T cd06606         246 KKRPTADELLQHPFL  260 (260)
T ss_pred             hhCCCHHHHhhCCCC
Confidence            999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.67  E-value=1.1e-16  Score=129.99  Aligned_cols=97  Identities=34%  Similarity=0.624  Sum_probs=75.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||...+..++.++|+||+||++|++++|.+||..... .......... ......+..++..+.+|+.+||..+
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  256 (297)
T cd06656         178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-LRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMD  256 (297)
T ss_pred             CccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc-chheeeeccCCCCCCCCccccCHHHHHHHHHHccCC
Confidence            4579999999999999999999999999999999999964322 1221111111 1122234567888999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.||||...
T Consensus       257 p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         257 VDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             hhhCcCHHHHhcCchhccc
Confidence            9999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.67  E-value=1.4e-16  Score=127.79  Aligned_cols=96  Identities=34%  Similarity=0.562  Sum_probs=76.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||...+..++.++|+||+||++|+|++|.+||.... . ............+..+...+..+.+++.+||..+|
T Consensus       164 ~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06640         164 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH-P-MRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDP  241 (277)
T ss_pred             cccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcC-h-HhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCc
Confidence            457999999988899999999999999999999999996432 2 22222222233444556678899999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.+++.|+||...
T Consensus       242 ~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         242 SFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             ccCcCHHHHHhChHhhhc
Confidence            999999999999999653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.66  E-value=1.3e-16  Score=133.37  Aligned_cols=99  Identities=23%  Similarity=0.350  Sum_probs=73.2

Q ss_pred             CcceecCcccCCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC--ccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSS----YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~----y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~   74 (222)
                      |+.|||||++.+..    |+.++|+||+||++|+|++|.+||... ..................|  ..++..+++++.+
T Consensus       206 t~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  284 (370)
T cd05621         206 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD-SLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICA  284 (370)
T ss_pred             CcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHH
Confidence            67899999886543    889999999999999999999999743 2222222222222222333  3569999999999


Q ss_pred             hcccCCCC--CCChhhhhcCcccccccc
Q psy14555         75 CFEKDPDK--RATAGELLEDPFLADLTA  100 (222)
Q Consensus        75 ~l~~~p~~--R~s~~~~l~h~~~~~~~~  100 (222)
                      ||..++.+  |+++.++++||||+...+
T Consensus       285 ~L~~~~~r~~R~~~~e~l~hp~~~~~~~  312 (370)
T cd05621         285 FLTDREVRLGRNGVEEIKQHPFFKNDQW  312 (370)
T ss_pred             HccCchhccCCCCHHHHhcCcccCCCCc
Confidence            99855543  899999999999987544

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.66  E-value=1.8e-17  Score=135.77  Aligned_cols=98  Identities=22%  Similarity=0.359  Sum_probs=78.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..++.++|+||+||++|+|++|+.||... . ........ .......|..++..+.+++.+||..+|
T Consensus       161 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~-~-~~~~~~~i-~~~~~~~p~~~~~~~~~li~~~l~~~P  237 (318)
T cd05582         161 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK-D-RKETMTMI-LKAKLGMPQFLSPEAQSLLRALFKRNP  237 (318)
T ss_pred             ChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC-C-HHHHHHHH-HcCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            56799999999999999999999999999999999999642 2 22222221 122334566789999999999999999


Q ss_pred             CCCCC-----hhhhhcCccccccccc
Q psy14555         81 DKRAT-----AGELLEDPFLADLTAT  101 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~  101 (222)
                      .+||+     ..+++.|+||....+.
T Consensus       238 ~~R~~a~~~~~~~~~~~~~~~~~~~~  263 (318)
T cd05582         238 ANRLGAGPDGVEEIKRHPFFSTIDWN  263 (318)
T ss_pred             hHcCCCCCCCHHHHhCCCCcCCCCHH
Confidence            99999     5669999999876544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG4645|consensus

Probab=99.66  E-value=1.5e-17  Score=150.50  Aligned_cols=96  Identities=39%  Similarity=0.686  Sum_probs=84.8

Q ss_pred             CcceecCcccCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNS---SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~---~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|||||++.+.   +++-+.||||+|||+.||+||+.||....+....++.++ .+..|..|..+|.+.++|+..||.
T Consensus      1401 T~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~-~gh~Pq~P~~ls~~g~dFle~Cl~ 1479 (1509)
T KOG4645|consen 1401 TPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA-AGHKPQIPERLSSEGRDFLEHCLE 1479 (1509)
T ss_pred             CchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh-ccCCCCCchhhhHhHHHHHHHHHh
Confidence            8999999988765   477899999999999999999999998777777777664 456677888899999999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .||+.|.++.|++.|.|-+.
T Consensus      1480 ~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1480 QDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             cCchhhhHHHHHHHhhcccc
Confidence            99999999999999998764

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.66  E-value=2.2e-16  Score=126.89  Aligned_cols=98  Identities=26%  Similarity=0.548  Sum_probs=74.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHhhhccCCCCC-CccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-----AALYRVGFHKMHPEI-PAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~li~~   74 (222)
                      |..|+|||++.+..++.++|+||+||++|+|++|..||.......     ............... ....+.++.+++.+
T Consensus       156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  235 (279)
T cd06619         156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQ  235 (279)
T ss_pred             ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHH
Confidence            568999999999999999999999999999999999996322111     111111111112222 23468899999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||..+|.+||++.+++.||||...
T Consensus       236 ~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         236 CMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HhhCChhhCCCHHHHhcCcccccc
Confidence            999999999999999999999754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.66  E-value=2.3e-16  Score=127.24  Aligned_cols=96  Identities=31%  Similarity=0.565  Sum_probs=74.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC--CCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|++||...+..++.++|+||+||++|+|++|..||... .. ............+  ..+...+..+.+++.+||..
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  255 (285)
T cd06648         178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE-PP-LQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVR  255 (285)
T ss_pred             CccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC-CH-HHHHHHHHhcCCCCCcccccCCHHHHHHHHHHccc
Confidence            45799999998889999999999999999999999999642 22 2222221111111  12234688999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.|+||...
T Consensus       256 ~p~~Rpt~~~il~~~~~~~~  275 (285)
T cd06648         256 DPAQRATAAELLNHPFLAKA  275 (285)
T ss_pred             ChhhCcCHHHHccCcccccC
Confidence            99999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.66  E-value=8.6e-17  Score=135.50  Aligned_cols=99  Identities=18%  Similarity=0.297  Sum_probs=72.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhh--hc----------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVG--FH----------------------   54 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~--~~----------------------   54 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|..||.+....  ...+....  ..                      
T Consensus       250 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (392)
T PHA03207        250 TLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYA  329 (392)
T ss_pred             ccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhc
Confidence            57899999999999999999999999999999999999643221  11110000  00                      


Q ss_pred             -cCCC--CCC-----ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         55 -KMHP--EIP-----AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        55 -~~~~--~~~-----~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                       ...+  ..+     ..++.++.+||.+||..+|.+||++.+++.||||....
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        330 IVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             ccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence             0000  011     13467788999999999999999999999999998643

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.66  E-value=2e-16  Score=127.06  Aligned_cols=97  Identities=28%  Similarity=0.553  Sum_probs=74.1

Q ss_pred             CcceecCcccCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC-ccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVN----SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP-AELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~----~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~   75 (222)
                      |..|+|||.+.+    ..|+.++|+||+||++|+|++|..||............. .....+..+ ..++.++.+++.+|
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~  244 (283)
T cd06617         166 CKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV-VEEPSPQLPAEKFSPEFQDFVNKC  244 (283)
T ss_pred             CccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH-HhcCCCCCCccccCHHHHHHHHHH
Confidence            457999997754    557899999999999999999999996432222322222 222223333 34788999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |..+|.+||++.+++.||||...
T Consensus       245 l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         245 LKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             ccCChhhCcCHHHHhcCchhhhc
Confidence            99999999999999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.66  E-value=2.8e-16  Score=126.31  Aligned_cols=94  Identities=26%  Similarity=0.437  Sum_probs=68.4

Q ss_pred             CcceecCcccCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC---------------------
Q psy14555          1 MNVIFLTQYSVNSS-YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~~~-y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~---------------------   57 (222)
                      |..|+|||...+.. ++.++|+||+||++|+|++|+.||..... ........ ....+                     
T Consensus       163 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd07860         163 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKW  241 (284)
T ss_pred             cccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccc
Confidence            35699999776544 68899999999999999999999974322 11111110 00000                     


Q ss_pred             -----CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         58 -----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        58 -----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                           ......++..+.+++.+||..+|.+||++++++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         242 ARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             cccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence                 00112467888999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.66  E-value=6.2e-17  Score=135.55  Aligned_cols=99  Identities=26%  Similarity=0.444  Sum_probs=76.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc--cCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH--KMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|+.||.... ...........  ....+....++..+.+++.+|+ .
T Consensus       207 t~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~  284 (376)
T cd05598         207 TPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT-PAETQLKVINWETTLHIPSQAKLSREASDLILRLC-C  284 (376)
T ss_pred             CccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC-HHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-c
Confidence            568999999999999999999999999999999999997532 22222222111  1122223467899999999976 5


Q ss_pred             CCCCCC---ChhhhhcCccccccccc
Q psy14555         79 DPDKRA---TAGELLEDPFLADLTAT  101 (222)
Q Consensus        79 ~p~~R~---s~~~~l~h~~~~~~~~~  101 (222)
                      +|.+|+   ++.+++.||||.+..+.
T Consensus       285 ~p~~R~~~~t~~ell~h~~~~~~~~~  310 (376)
T cd05598         285 GAEDRLGKNGADEIKAHPFFKGIDFA  310 (376)
T ss_pred             CHhhcCCCCCHHHHhCCCCcCCCCHH
Confidence            999999   99999999999876543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.66  E-value=2e-16  Score=127.20  Aligned_cols=95  Identities=22%  Similarity=0.369  Sum_probs=67.8

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh------------------ccCCC---
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF------------------HKMHP---   58 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~------------------~~~~~---   58 (222)
                      |..|+|||.+.+. .|+.++|+||+||++|+|++|..||...............                  ....+   
T Consensus       162 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd07839         162 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYP  241 (284)
T ss_pred             ccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCC
Confidence            4679999987664 4799999999999999999988886432222111111000                  00000   


Q ss_pred             ------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 ------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 ------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                            .....++.++.+|+.+||..+|.+|||+++++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         242 ATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence                  0112467899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.66  E-value=3.4e-16  Score=124.65  Aligned_cols=96  Identities=31%  Similarity=0.630  Sum_probs=76.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|++||...+..++.++|+||+||++|+|++|..||......  .............+..+...+.++.+++.+||..
T Consensus       171 ~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  250 (268)
T cd06630         171 TIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLEL  250 (268)
T ss_pred             ccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCC
Confidence            34799999998899999999999999999999999999532211  1222222223344556677889999999999999


Q ss_pred             CCCCCCChhhhhcCcccc
Q psy14555         79 DPDKRATAGELLEDPFLA   96 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~   96 (222)
                      +|.+||++.+++.||||+
T Consensus       251 ~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         251 QPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             CcccCcCHHHHhcCcccC
Confidence            999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.66  E-value=2.5e-16  Score=127.25  Aligned_cols=108  Identities=22%  Similarity=0.383  Sum_probs=83.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||.+.+..++.++|+||+|+++|+|++|..||....  ......... ......+..++..+++++.+||..+|
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p  237 (290)
T cd05580         161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--PIQIYEKIL-EGKVRFPSFFSPDAKDLIRNLLQVDL  237 (290)
T ss_pred             CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHh-cCCccCCccCCHHHHHHHHHHccCCH
Confidence            457999999988889999999999999999999999996432  222222211 23344566779999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCCCCCCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      .+|+     ++++++.||||....|..........|
T Consensus       238 ~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  273 (290)
T cd05580         238 TKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAP  273 (290)
T ss_pred             HHccCcccCCHHHHHcCcccccCCHHHHhhccCCCC
Confidence            9998     899999999999877665544444333

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0593|consensus

Probab=99.66  E-value=1.3e-16  Score=125.10  Aligned_cols=98  Identities=21%  Similarity=0.455  Sum_probs=74.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc------------------cCCCCCC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH------------------KMHPEIP   61 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~------------------~~~~~~~   61 (222)
                      |.-|-|||.+.+ ..|+++|||||+||++.||++|.+-|++.++.+.........                  +...+.|
T Consensus       164 TRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~  243 (396)
T KOG0593|consen  164 TRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEP  243 (396)
T ss_pred             hhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCC
Confidence            567999996666 899999999999999999999999999765544433221100                  0111111


Q ss_pred             ----------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         62 ----------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        62 ----------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                +..+.-+.+|+++||..||.+|+++++++.|++|.+.
T Consensus       244 ~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~  290 (396)
T KOG0593|consen  244 EHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGF  290 (396)
T ss_pred             CCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHH
Confidence                      2456778999999999999999999999999999653

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=6.7e-17  Score=135.42  Aligned_cols=99  Identities=22%  Similarity=0.374  Sum_probs=74.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC--ccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||... ..................|  ..++.++++|+.+||. 
T Consensus       211 t~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-  288 (377)
T cd05629         211 TPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSE-NSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-  288 (377)
T ss_pred             CccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCC-CHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-
Confidence            56799999999999999999999999999999999999643 2222222221111122223  3578999999999997 


Q ss_pred             CCCCC---CChhhhhcCccccccccc
Q psy14555         79 DPDKR---ATAGELLEDPFLADLTAT  101 (222)
Q Consensus        79 ~p~~R---~s~~~~l~h~~~~~~~~~  101 (222)
                      +|.+|   +++.+++.||||.+..+.
T Consensus       289 ~~~~r~~r~~~~~~l~hp~~~~~~~~  314 (377)
T cd05629         289 NAENRLGRGGAHEIKSHPFFRGVDWD  314 (377)
T ss_pred             CHhhcCCCCCHHHHhcCCCcCCCCHH
Confidence            67665   599999999999876543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.66  E-value=2.8e-16  Score=127.55  Aligned_cols=97  Identities=31%  Similarity=0.556  Sum_probs=75.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||++.+..++.++|+||+||++|+|++|+.||... ............ ......+...+..+.+++.+||..+
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~  258 (297)
T cd06659         180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD-SPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTRE  258 (297)
T ss_pred             CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCC
Confidence            45799999999999999999999999999999999999643 222222222111 1112223456888999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.|+||...
T Consensus       259 P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         259 PQERATAQELLDHPFLLQT  277 (297)
T ss_pred             cccCcCHHHHhhChhhccC
Confidence            9999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.65  E-value=1.8e-16  Score=130.42  Aligned_cols=97  Identities=25%  Similarity=0.437  Sum_probs=70.7

Q ss_pred             cceecCcccCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc------------------------
Q psy14555          2 NVIFLTQYSVNS--SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK------------------------   55 (222)
Q Consensus         2 ~~y~aPe~~~~~--~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~------------------------   55 (222)
                      ..||+||++.+.  .|+.++|+||+||++|+|++|.+||.................                        
T Consensus       172 ~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (328)
T cd08226         172 LPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVD  251 (328)
T ss_pred             cCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhh
Confidence            469999998764  478999999999999999999999964322111111100000                        


Q ss_pred             --------------------CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 --------------------MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 --------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                          .....+..++..+.+|+.+||..+|.+|||+.++++|+||...
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         252 SGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             cccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence                                0011123356788999999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.65  E-value=2.1e-16  Score=127.01  Aligned_cols=90  Identities=13%  Similarity=0.345  Sum_probs=73.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||++.++.++.++|+||+||++|||++ |..||.+..  ................+..++..+.+|+.+||..+
T Consensus       189 ~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~  266 (283)
T cd05048         189 PVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS--NQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEI  266 (283)
T ss_pred             cccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCC
Confidence            356999999999999999999999999999998 999997532  23333333344445566778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       267 p~~Rp~~~~i~~~  279 (283)
T cd05048         267 PARRPRFKDIHTR  279 (283)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0661|consensus

Probab=99.65  E-value=4.9e-16  Score=128.19  Aligned_cols=99  Identities=24%  Similarity=0.364  Sum_probs=75.9

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC----------------CCCC--
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH----------------PEIP--   61 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~----------------~~~~--   61 (222)
                      |.-|-|||+++. +.|+.++|+|++|||++|+.+-++-|++.++.++....+...+.+                ..+|  
T Consensus       172 TRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~  251 (538)
T KOG0661|consen  172 TRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQV  251 (538)
T ss_pred             cccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcC
Confidence            667999997664 568999999999999999999999999755444333222222211                0111  


Q ss_pred             ---------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         62 ---------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        62 ---------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                               ...+.++.++|.+|+.+||.+||||+++++||||+...
T Consensus       252 ~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  252 KPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             CCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence                     23688999999999999999999999999999998643

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.65  E-value=5e-16  Score=126.59  Aligned_cols=97  Identities=22%  Similarity=0.296  Sum_probs=70.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccC----------------CCCC--
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKM----------------HPEI--   60 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~----------------~~~~--   60 (222)
                      |..|+|||.+.+ ..++.++|+||+||++|+|++|.+||.... .......... ...                ....  
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (309)
T cd07845         171 TLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS-EIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPK  249 (309)
T ss_pred             cccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCChhhchhhhcccccccccccC
Confidence            356999998765 568999999999999999999999997432 2222111110 000                0000  


Q ss_pred             ---------CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         61 ---------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        61 ---------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                               ....++.+.+|+.+||..||.+||++.+++.||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         250 QPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             CCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence                     01257889999999999999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.65  E-value=1.6e-16  Score=127.42  Aligned_cols=96  Identities=32%  Similarity=0.521  Sum_probs=75.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      +..|++||.+.+..++.++|+||+||++|+|++|.+||.....  ............+..+...+..+.+++.+||..+|
T Consensus       164 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06642         164 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP--MRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDP  241 (277)
T ss_pred             cccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch--hhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCc
Confidence            3569999999999999999999999999999999999864221  11111112222333445678889999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.+++.|+||...
T Consensus       242 ~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         242 RFRPTAKELLKHKFITRY  259 (277)
T ss_pred             ccCcCHHHHHHhHHHHHH
Confidence            999999999999999754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.65  E-value=2.8e-16  Score=127.63  Aligned_cols=97  Identities=23%  Similarity=0.406  Sum_probs=70.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhcc----------------CC---C-
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHK----------------MH---P-   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~----------------~~---~-   58 (222)
                      |..|++||.+.+ ..++.++|+||+||++|+|++|++||.... ........ ....                ..   + 
T Consensus       167 ~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (301)
T cd07873         167 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST-VEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPK  245 (301)
T ss_pred             eecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHcCCCChhhchhhhccccccccccCc
Confidence            467999997765 458899999999999999999999997432 21111110 0000                00   0 


Q ss_pred             -------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 -------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 -------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                             .....+++.+++|+.+||..+|.+|||+.+++.||||+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         246 YRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             cccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence                   0113467889999999999999999999999999999753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0695|consensus

Probab=99.65  E-value=3.2e-16  Score=124.75  Aligned_cols=114  Identities=24%  Similarity=0.399  Sum_probs=90.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--Ch----HHHHHHhhhccCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELG--SP----QAALYRVGFHKMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~   74 (222)
                      |+-|+|||.+.+..|+.++|||++||+++||+.|+.||.-.+  ++    ...++.+ +....-..|..+|-.+..+++.
T Consensus       414 tpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv-ilekqiriprslsvkas~vlkg  492 (593)
T KOG0695|consen  414 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV-ILEKQIRIPRSLSVKASHVLKG  492 (593)
T ss_pred             CCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH-HhhhcccccceeehhhHHHHHH
Confidence            788999999999999999999999999999999999997332  11    1223333 2233345688899999999999


Q ss_pred             hcccCCCCCC------ChhhhhcCccccccccccCCCCCCCCCCCCC
Q psy14555         75 CFEKDPDKRA------TAGELLEDPFLADLTATRSSSSGLLSPEVNL  115 (222)
Q Consensus        75 ~l~~~p~~R~------s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~  115 (222)
                      .|++||++|.      .++++..|+||+...|.........+|..+.
T Consensus       493 flnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~  539 (593)
T KOG0695|consen  493 FLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQ  539 (593)
T ss_pred             hhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCc
Confidence            9999999996      4688999999998888776666555554443

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.65  E-value=2.9e-16  Score=126.21  Aligned_cols=94  Identities=26%  Similarity=0.363  Sum_probs=68.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-c------------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-H------------------------   54 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~------------------------   54 (222)
                      |..|+|||.+.+ ..++.++|+||+||++|+|++|++||.+... ......... .                        
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
T cd07861         164 TLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSE-IDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKW  242 (285)
T ss_pred             cccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCCChhhhhcchhhHHHHhhcccc
Confidence            357999997755 4579999999999999999999999964321 111111000 0                        


Q ss_pred             --cCCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         55 --KMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        55 --~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                        .........++.++.+++.+||..+|.+||++.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         243 KKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             CcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence              00001123468889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.65  E-value=4.1e-16  Score=124.16  Aligned_cols=94  Identities=34%  Similarity=0.672  Sum_probs=75.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||...+..++.++|+||+||++|+|++|+.||... ...............+..|...+..+.+++.+|+. +|
T Consensus       172 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p  249 (265)
T cd06652         172 TPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF-EAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EA  249 (265)
T ss_pred             CccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc-chHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-Ch
Confidence            45799999998899999999999999999999999999643 22233333323333445567788999999999995 89


Q ss_pred             CCCCChhhhhcCcccc
Q psy14555         81 DKRATAGELLEDPFLA   96 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~   96 (222)
                      ..||++++++.|||+.
T Consensus       250 ~~Rp~~~~il~~~~~~  265 (265)
T cd06652         250 KLRPSADELLRHTFVH  265 (265)
T ss_pred             hhCCCHHHHhcCcccC
Confidence            9999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.65  E-value=3.3e-16  Score=125.58  Aligned_cols=94  Identities=21%  Similarity=0.419  Sum_probs=68.5

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhc---------------cCCCCC---
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFH---------------KMHPEI---   60 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~---------------~~~~~~---   60 (222)
                      |..|+|||++.. +.++.++|+||+||++|+|++|.+||..... ....... ...               ......   
T Consensus       161 ~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
T cd07831         161 TRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE-LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSK  239 (282)
T ss_pred             CcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH-HHHHHHHHHHcCCCCHHHHHhhcccccccccCccc
Confidence            457999997654 5578899999999999999999999975322 1111110 000               000011   


Q ss_pred             --------CccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         61 --------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        61 --------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                              ....+..+.+++.+||..+|.+||++.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         240 KGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence                    12457899999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.65  E-value=1.7e-16  Score=129.49  Aligned_cols=96  Identities=24%  Similarity=0.443  Sum_probs=70.2

Q ss_pred             cceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc------------------------
Q psy14555          2 NVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK------------------------   55 (222)
Q Consensus         2 ~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~------------------------   55 (222)
                      ..|+|||.+..  ..|+.++|+||+||++|+|++|..||...... ..........                        
T Consensus       172 ~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (314)
T cd08216         172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN  250 (314)
T ss_pred             ccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence            46999998766  46899999999999999999999999743222 1111111000                        


Q ss_pred             --------CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 --------MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 --------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                              ........++.++.+|+.+||..+|.+||++.+++.||||+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence                    0001112345788999999999999999999999999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.65  E-value=4.2e-16  Score=123.28  Aligned_cols=94  Identities=49%  Similarity=0.871  Sum_probs=75.7

Q ss_pred             CcceecCcccCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSS-YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~-y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||.+.... ++.++|+||+||++|+|++|.+||.... ..............+..+..++..+.+++.+||..+
T Consensus       164 ~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  242 (258)
T cd06632         164 SPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE-GVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRD  242 (258)
T ss_pred             CcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc-HHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcC
Confidence            45699999887776 8999999999999999999999996432 223333333323344556678899999999999999


Q ss_pred             CCCCCChhhhhcCccc
Q psy14555         80 PDKRATAGELLEDPFL   95 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~   95 (222)
                      |.+||++.+++.|||+
T Consensus       243 p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         243 PSLRPTAAELLEHPFV  258 (258)
T ss_pred             cccCcCHHHHhcCCCC
Confidence            9999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.65  E-value=2.8e-16  Score=126.43  Aligned_cols=94  Identities=30%  Similarity=0.588  Sum_probs=70.5

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~   74 (222)
                      |..|+|||++.     ...|+.++|+||+||++|+|++|..||..... .......... ......+...+..+.+++.+
T Consensus       187 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  265 (286)
T cd06638         187 TPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP-MRALFKIPRNPPPTLHQPELWSNEFNDFIRK  265 (286)
T ss_pred             CCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch-hHHHhhccccCCCcccCCCCcCHHHHHHHHH
Confidence            46799999875     34588999999999999999999999964322 1222221111 11122334567889999999


Q ss_pred             hcccCCCCCCChhhhhcCccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~   95 (222)
                      ||..+|.+||++.+++.|+||
T Consensus       266 ~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         266 CLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HccCCcccCCCHHHHhhcccC
Confidence            999999999999999999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.65  E-value=2.4e-16  Score=126.93  Aligned_cols=97  Identities=35%  Similarity=0.662  Sum_probs=75.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC-CCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH-PEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||.+.+..++.++|+||+||++|+|++|..||... ............... ...+..++..+.+++.+||..+
T Consensus       179 ~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  257 (286)
T cd06614         179 TPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE-PPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKD  257 (286)
T ss_pred             CcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccC
Confidence            35799999999899999999999999999999999999642 222222222211111 1222347889999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.|+||+..
T Consensus       258 p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         258 PEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             hhhCcCHHHHhhChHhhcc
Confidence            9999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.65  E-value=2.2e-16  Score=127.92  Aligned_cols=97  Identities=35%  Similarity=0.645  Sum_probs=74.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||....+.++.++|+||+||++|++++|..||.... ........... ......+..++....+++.+||..+
T Consensus       178 ~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  256 (293)
T cd06647         178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN-PLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD  256 (293)
T ss_pred             ChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCC
Confidence            346999999988899999999999999999999999996422 22221111111 1112223456788999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.|+||+..
T Consensus       257 p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         257 VEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             hhhCcCHHHHhcCHHHhcC
Confidence            9999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.65  E-value=3.6e-16  Score=127.23  Aligned_cols=99  Identities=21%  Similarity=0.327  Sum_probs=76.2

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhcccC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      ..|+|||.+....++.++|+||+||++|++++|..||.+.  ............  ..+.....++..+.+++.+||..+
T Consensus       180 ~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  257 (305)
T cd05609         180 PEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--TPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQN  257 (305)
T ss_pred             ccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccC
Confidence            4699999999999999999999999999999999999743  223322221111  112222357889999999999999


Q ss_pred             CCCCCC---hhhhhcCcccccccccc
Q psy14555         80 PDKRAT---AGELLEDPFLADLTATR  102 (222)
Q Consensus        80 p~~R~s---~~~~l~h~~~~~~~~~~  102 (222)
                      |.+||+   +.+++.||||....+..
T Consensus       258 P~~R~~~~~~~~ll~~~~~~~~~~~~  283 (305)
T cd05609         258 PLERLGTGGAFEVKQHRFFLGLDWNG  283 (305)
T ss_pred             hhhccCccCHHHHHhCccccCCCHHH
Confidence            999997   68899999998765544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.65  E-value=6e-16  Score=122.88  Aligned_cols=94  Identities=43%  Similarity=0.768  Sum_probs=73.6

Q ss_pred             CcceecCcccCCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCc--cccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSS---YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~---y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~   75 (222)
                      +..|++||.+.+..   ++.++|+||+|+++|++++|..||.............. ....+..|.  .++..+.+++.+|
T Consensus       166 ~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~  244 (264)
T cd06626         166 TPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG-AGHKPPIPDSLQLSPEGKDFLDRC  244 (264)
T ss_pred             CcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh-cCCCCCCCcccccCHHHHHHHHHH
Confidence            35799999988776   89999999999999999999999965433322222222 233333443  3488999999999


Q ss_pred             cccCCCCCCChhhhhcCccc
Q psy14555         76 FEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~   95 (222)
                      |..+|.+||++.+++.|||+
T Consensus       245 l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         245 LESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             ccCCcccCCCHHHHhcCCCC
Confidence            99999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=3e-16  Score=124.59  Aligned_cols=99  Identities=27%  Similarity=0.387  Sum_probs=75.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      +..|++||...+..++.++|+||+|+++|+|++|.+||... ...........  ..........++..+.+++.+||..
T Consensus       156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  234 (260)
T cd05611         156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAE-TPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCM  234 (260)
T ss_pred             CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccC
Confidence            35799999998888999999999999999999999999643 22222222111  1122233346789999999999999


Q ss_pred             CCCCCCCh---hhhhcCcccccccc
Q psy14555         79 DPDKRATA---GELLEDPFLADLTA  100 (222)
Q Consensus        79 ~p~~R~s~---~~~l~h~~~~~~~~  100 (222)
                      +|.+||++   .+++.||||+...|
T Consensus       235 ~p~~R~~~~~~~~~l~~~~~~~~~~  259 (260)
T cd05611         235 DPAKRLGANGYQEIKSHPFFKSINW  259 (260)
T ss_pred             CHHHccCCCcHHHHHcChHhhcCCC
Confidence            99999955   79999999986543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.65  E-value=2.9e-16  Score=130.74  Aligned_cols=97  Identities=24%  Similarity=0.339  Sum_probs=67.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCCh--------HHHHHHhh-hcc-CCCCCC--------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPP-FIELGSP--------QAALYRVG-FHK-MHPEIP--------   61 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~P-f~~~~~~--------~~~~~~~~-~~~-~~~~~~--------   61 (222)
                      |..|+|||++.+..|+.++|+||+||++|||+++..| |......        ...+.... ... .+..++        
T Consensus       219 t~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  298 (357)
T PHA03209        219 TVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLV  298 (357)
T ss_pred             cccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHH
Confidence            5689999999999999999999999999999985444 4321111        00011100 000 000000        


Q ss_pred             ----------------------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         62 ----------------------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        62 ----------------------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                                            ..++.++.+||.+||+.||.+|||+.++++||||+.
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        299 RGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                  134667788999999999999999999999999974

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.65  E-value=5.6e-16  Score=124.76  Aligned_cols=97  Identities=30%  Similarity=0.547  Sum_probs=75.4

Q ss_pred             CcceecCcccCCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH--HHHhhhccCCCCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVNS------SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA--LYRVGFHKMHPEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~~------~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li   72 (222)
                      |..|++||.+.+.      .++.++|+||+||++|+|++|..||.... ....  ..........+..+..++.++.+|+
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (286)
T cd06622         164 CQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET-YANIFAQLSAIVDGDPPTLPSGYSDDAQDFV  242 (286)
T ss_pred             ccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc-hhhHHHHHHHHhhcCCCCCCcccCHHHHHHH
Confidence            3579999987554      35889999999999999999999996422 2111  1122233344556667899999999


Q ss_pred             HHhcccCCCCCCChhhhhcCcccccc
Q psy14555         73 LRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||..+|.+||++.+++.||||...
T Consensus       243 ~~~l~~~p~~Rp~~~~l~~~~~~~~~  268 (286)
T cd06622         243 AKCLNKIPNRRPTYAQLLEHPWLVKY  268 (286)
T ss_pred             HHHcccCcccCCCHHHHhcChhhhhc
Confidence            99999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=4e-16  Score=123.72  Aligned_cols=93  Identities=31%  Similarity=0.554  Sum_probs=71.3

Q ss_pred             CcceecCcccCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC---CCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNS---SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---PEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~---~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~   74 (222)
                      |..|++||.+.+.   .++.++|+||+||++|+|++|.+||..... .............   ...+...+.++.+++.+
T Consensus       164 ~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  242 (262)
T cd06613         164 TPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP-MRALFLISKSNFPPPKLKDKEKWSPVFHDFIKK  242 (262)
T ss_pred             CccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCCccccchhhhhHHHHHHHHH
Confidence            3569999988777   889999999999999999999999975332 2222222222111   12234457889999999


Q ss_pred             hcccCCCCCCChhhhhcCcc
Q psy14555         75 CFEKDPDKRATAGELLEDPF   94 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~   94 (222)
                      ||..+|..||++.+++.|+|
T Consensus       243 ~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         243 CLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HcCCChhhCCCHHHHhcCCC
Confidence            99999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.65  E-value=4.3e-16  Score=123.65  Aligned_cols=93  Identities=25%  Similarity=0.443  Sum_probs=75.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||...+..++.++|+||+|+++|+|++|..||..  ...............+..+...+..+.+++.+||..+|
T Consensus       168 ~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  245 (260)
T cd08222         168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG--QNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDP  245 (260)
T ss_pred             CcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC--ccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCCh
Confidence            3569999998888899999999999999999999999963  22222222223344445566788999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.||||
T Consensus       246 ~~Rp~~~~il~~~~~  260 (260)
T cd08222         246 SLRPSAAEILRNPFI  260 (260)
T ss_pred             hhCcCHHHHhhCCCC
Confidence            999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.65  E-value=4e-16  Score=123.76  Aligned_cols=98  Identities=39%  Similarity=0.615  Sum_probs=78.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-hHHHHHHhhhccCCCCCCcc-ccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS-PQAALYRVGFHKMHPEIPAE-LSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~   78 (222)
                      +..|++||.+....++.++|+||+|+++|+|++|..||..... ..............+..+.. ++..+.+++.+||..
T Consensus       163 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  242 (264)
T cd06623         163 TVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQK  242 (264)
T ss_pred             cccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccC
Confidence            3579999999999999999999999999999999999975431 22222222233333444555 789999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.|||++..
T Consensus       243 ~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         243 DPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             ChhhCCCHHHHHhCHHHHhc
Confidence            99999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0589|consensus

Probab=99.65  E-value=1.8e-16  Score=131.47  Aligned_cols=95  Identities=28%  Similarity=0.465  Sum_probs=81.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.||+||.+.+..|+.++|+||+||++|||++-+++|..  .....+...+......+.|...+.+++.+++.||..+|
T Consensus       169 Tp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a--~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P  246 (426)
T KOG0589|consen  169 TPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA--SNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNP  246 (426)
T ss_pred             CCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc--cchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCC
Confidence            8899999999999999999999999999999999999974  33344333334444677788899999999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      ..||++.+++.+|.+..
T Consensus       247 ~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  247 EHRPSALELLRRPHLLR  263 (426)
T ss_pred             ccCCCHHHHhhChhhhh
Confidence            99999999999987763

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.64  E-value=4.3e-16  Score=124.12  Aligned_cols=93  Identities=28%  Similarity=0.535  Sum_probs=69.5

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCC---CccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI---PAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~   74 (222)
                      |..|+|||.+.   .+.++.++|+||+||++|+|++|.+||..... .............++.   ...++..+.+++.+
T Consensus       169 ~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  247 (267)
T cd06645         169 TPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP-MRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKM  247 (267)
T ss_pred             cccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc-hhhHHhhhccCCCCCcccccCCCCHHHHHHHHH
Confidence            46799999874   55689999999999999999999999864322 2222222111111111   12467889999999


Q ss_pred             hcccCCCCCCChhhhhcCcc
Q psy14555         75 CFEKDPDKRATAGELLEDPF   94 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~   94 (222)
                      ||..+|.+||++.+++.|||
T Consensus       248 ~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         248 ALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HccCCchhCcCHHHHhcCCC
Confidence            99999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.64  E-value=4e-16  Score=130.53  Aligned_cols=99  Identities=20%  Similarity=0.274  Sum_probs=72.2

Q ss_pred             CcceecCcccCCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSS----YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~----y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~   74 (222)
                      |+.|||||++....    |+.++||||+||++|+|++|.+||... .............  ...+.+..++..+++++.+
T Consensus       206 t~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  284 (371)
T cd05622         206 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA  284 (371)
T ss_pred             CccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHH
Confidence            67899999886543    889999999999999999999999742 2222222221111  2223334689999999999


Q ss_pred             hcccCCCC--CCChhhhhcCcccccccc
Q psy14555         75 CFEKDPDK--RATAGELLEDPFLADLTA  100 (222)
Q Consensus        75 ~l~~~p~~--R~s~~~~l~h~~~~~~~~  100 (222)
                      ||...+.+  |+++.++++|+||++..+
T Consensus       285 ~L~~~~~r~~r~~~~ei~~h~~~~~~~~  312 (371)
T cd05622         285 FLTDREVRLGRNGVEEIKRHLFFKNDQW  312 (371)
T ss_pred             HcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence            99844433  789999999999987543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.64  E-value=5.8e-16  Score=126.12  Aligned_cols=96  Identities=27%  Similarity=0.533  Sum_probs=72.6

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |..|+|||++.   .+.++.++||||+|+++|+|++|.+||... ..................+..++..+.+++.+||.
T Consensus       174 ~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  252 (307)
T cd06607         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQ  252 (307)
T ss_pred             CccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCc-cHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc
Confidence            35799999874   466899999999999999999999999643 22222222221122222234568899999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+|.+||++.+++.||||..
T Consensus       253 ~~p~~Rp~~~~il~~~~~~~  272 (307)
T cd06607         253 KIPQDRPSSEELLKHRFVLR  272 (307)
T ss_pred             CChhhCcCHHHHhcChhhcc
Confidence            99999999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.64  E-value=6.3e-16  Score=127.55  Aligned_cols=98  Identities=26%  Similarity=0.454  Sum_probs=70.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hh-----------------------cc
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GF-----------------------HK   55 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~-----------------------~~   55 (222)
                      |..|+|||.+.+ ..++.++|+||+||++|+|++|++||..... ....... ..                       ..
T Consensus       172 ~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (336)
T cd07849         172 TRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-LHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLP  250 (336)
T ss_pred             CCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcC
Confidence            456999997654 5689999999999999999999999964221 1110000 00                       00


Q ss_pred             CCCCC-----CccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         56 MHPEI-----PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        56 ~~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      .....     ....+..+.+++.+||..+|.+||++.+++.||||....
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         251 FKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             cCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            00000     123577899999999999999999999999999998653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.64  E-value=4.3e-16  Score=129.42  Aligned_cols=98  Identities=19%  Similarity=0.343  Sum_probs=72.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccC-------------------CC--
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKM-------------------HP--   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~-------------------~~--   58 (222)
                      |..|+|||.+.+..++.++|+||+||++|+|++|+.||..... ........ ..+.                   .+  
T Consensus       180 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (353)
T cd07850         180 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY  258 (353)
T ss_pred             cccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCC
Confidence            4579999999999999999999999999999999999974321 11110000 0000                   00  


Q ss_pred             -------------------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         59 -------------------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        59 -------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                                         ..+...+..+.+++.+||..+|.+||++.+++.||||..+.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~  318 (353)
T cd07850         259 AGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWY  318 (353)
T ss_pred             CCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhcc
Confidence                               00113466789999999999999999999999999998543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0612|consensus

Probab=99.64  E-value=2.3e-16  Score=141.22  Aligned_cols=100  Identities=21%  Similarity=0.346  Sum_probs=78.2

Q ss_pred             CcceecCcccC----C-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH-HHHhhhccCCCCCC--ccccHHHHHHH
Q psy14555          1 MNVIFLTQYSV----N-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA-LYRVGFHKMHPEIP--AELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~----~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~li   72 (222)
                      ||-|++||++.    + +.||..|||||+||++|||+.|..||..  ..... ..++........+|  ..+|.++++||
T Consensus       239 TPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa--dslveTY~KIm~hk~~l~FP~~~~VSeeakdLI  316 (1317)
T KOG0612|consen  239 TPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA--DSLVETYGKIMNHKESLSFPDETDVSEEAKDLI  316 (1317)
T ss_pred             CCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH--HHHHHHHHHHhchhhhcCCCcccccCHHHHHHH
Confidence            88999999654    2 6799999999999999999999999963  23332 23333343444555  66899999999


Q ss_pred             HHhcccCCCCCCC---hhhhhcCccccccccccC
Q psy14555         73 LRCFEKDPDKRAT---AGELLEDPFLADLTATRS  103 (222)
Q Consensus        73 ~~~l~~~p~~R~s---~~~~l~h~~~~~~~~~~~  103 (222)
                      .+++.. |..|.+   ++++..||||.+..|...
T Consensus       317 ~~ll~~-~e~RLgrngiedik~HpFF~g~~W~~i  349 (1317)
T KOG0612|consen  317 EALLCD-REVRLGRNGIEDIKNHPFFEGIDWDNI  349 (1317)
T ss_pred             HHHhcC-hhhhcccccHHHHHhCccccCCChhhh
Confidence            999864 777776   999999999999988543

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.64  E-value=6.3e-16  Score=127.90  Aligned_cols=97  Identities=23%  Similarity=0.377  Sum_probs=70.5

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-----------------------ccC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-----------------------HKM   56 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-----------------------~~~   56 (222)
                      |..|+|||.+.. ..++.++|+||+||++|+|++|..||...... ........                       ...
T Consensus       181 ~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (342)
T cd07854         181 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL-EQMQLILESVPVVREEDRNELLNVIPSFVRNDGG  259 (342)
T ss_pred             cccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhccc
Confidence            457999997654 56889999999999999999999999643221 11111000                       000


Q ss_pred             CCC-----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         57 HPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        57 ~~~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ...     ....++.++.+|+.+||..+|.+||++.+++.||||+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         260 EPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             ccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence            000     112467889999999999999999999999999999754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.64  E-value=5.1e-16  Score=124.74  Aligned_cols=94  Identities=26%  Similarity=0.437  Sum_probs=69.2

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-----------------------c-
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-----------------------K-   55 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-----------------------~-   55 (222)
                      |..|+|||++.+. .++.++|+||+|+++|+|++|.+||.... ...........                       . 
T Consensus       162 ~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd07835         162 TLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS-EIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKW  240 (283)
T ss_pred             ccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccc
Confidence            4579999987654 57899999999999999999999996432 21111111000                       0 


Q ss_pred             ---CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         56 ---MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        56 ---~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                         ........++..+.+++.+||..+|.+||++.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         241 ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence               0001123467889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.64  E-value=4.6e-16  Score=128.36  Aligned_cols=89  Identities=20%  Similarity=0.402  Sum_probs=71.4

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|||||++.+..|+.++||||+||++|||++ |.+||...... ...............+...+..+.+++.+||..+|
T Consensus       240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  318 (338)
T cd05102         240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-EEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDP  318 (338)
T ss_pred             ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            57999999999999999999999999999997 99999753322 22222223333444566788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       319 ~~RPs~~el~~  329 (338)
T cd05102         319 KERPTFSALVE  329 (338)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.64  E-value=7.3e-16  Score=124.82  Aligned_cols=97  Identities=32%  Similarity=0.550  Sum_probs=74.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC--CCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH--PEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|++||...+..++.++|+||+|+++|+|++|.+||... .. ...........+  .......+..+.+++.+||..
T Consensus       179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  256 (292)
T cd06657         179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-PP-LKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVR  256 (292)
T ss_pred             CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CH-HHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhC
Confidence            45799999988888999999999999999999999999642 22 221111111111  112345688899999999999


Q ss_pred             CCCCCCChhhhhcCccccccc
Q psy14555         79 DPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      +|.+||++.+++.||||....
T Consensus       257 ~P~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         257 DPAQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             CcccCcCHHHHhcChHHhccC
Confidence            999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.64  E-value=8.3e-16  Score=125.68  Aligned_cols=96  Identities=27%  Similarity=0.533  Sum_probs=73.4

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |..|+|||++.   .+.++.++|+||+||++|+|++|.+||... ..............+......++..+.+|+.+||+
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  258 (313)
T cd06633         180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQ  258 (313)
T ss_pred             cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence            45799999874   466889999999999999999999999653 22232322222222222234567889999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+|.+||++.+++.||||+.
T Consensus       259 ~~P~~Rp~~~~~l~~~~~~~  278 (313)
T cd06633         259 KIPQERPASAELLRHDFVRR  278 (313)
T ss_pred             CChhhCcCHHHHhcCcccCC
Confidence            99999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0196|consensus

Probab=99.64  E-value=6.9e-17  Score=139.93  Aligned_cols=189  Identities=14%  Similarity=0.237  Sum_probs=129.0

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      -|-|||.+..++++.++||||+|++|||.++ |..||+.+.  ...+.+....+...+.|..++..+..||..||+++..
T Consensus       799 RWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS--NQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~  876 (996)
T KOG0196|consen  799 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRN  876 (996)
T ss_pred             eecChhHhhhcccCchhhccccceEEEEecccCCCcccccc--hHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhh
Confidence            3779999999999999999999999999988 999999664  4566666677888888999999999999999999999


Q ss_pred             CCCChhhhhcC--ccccccccccCCCCCCCCCCCCCCCCCccccccccccccccccchhhhhcccchhHHHHHHHHhhhc
Q psy14555         82 KRATAGELLED--PFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRITLSGVLDQDRDHICQVWLKCIQR  159 (222)
Q Consensus        82 ~R~s~~~~l~h--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (222)
                      .||.+.+|+.+  ..+++..+..........+...+..........+....+|.+.+.    +....+.|...   .+..
T Consensus       877 ~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~~~~~~~f~sv~~WL~aIk----m~rY~~~F~~a---g~~s  949 (996)
T KOG0196|consen  877 RRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRSGSDFTPFRSVGDWLEAIK----MGRYKEHFAAA---GYTS  949 (996)
T ss_pred             cCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCCCCCCcccCCHHHHHHHhh----hhHHHHHHHhc---Cccc
Confidence            99999999884  455555444433333333333333333333333444444444433    33444443332   1222


Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDS  205 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~  205 (222)
                      -.....++.+++..+...+..+     ++++-..|+.++.++..-.
T Consensus       950 ~~~V~q~s~eDl~~~Gitl~Gh-----qkkIl~SIq~m~~q~~~~~  990 (996)
T KOG0196|consen  950 FEDVAQMSAEDLLRLGITLAGH-----QKKILSSIQAMRAQMRQTQ  990 (996)
T ss_pred             HHHHHhhhHHHHHhhceeecch-----hHHHHHHHHHHHHHhccCC
Confidence            2445566777777766555544     5677777999888876544

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.64  E-value=5.3e-16  Score=125.35  Aligned_cols=95  Identities=24%  Similarity=0.394  Sum_probs=69.5

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCC-----------------C---
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMH-----------------P---   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~-----------------~---   58 (222)
                      |..|+|||++.+ ..++.++|+||+|+++|+|++|.+||...... ........ ...+                 +   
T Consensus       174 ~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (295)
T cd07837         174 TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL-QQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWK  252 (295)
T ss_pred             ccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHhCCCChhhCcchhhccchhhcCccc
Confidence            346999997754 56899999999999999999999999753222 22111100 0000                 0   


Q ss_pred             -----CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccc
Q psy14555         59 -----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        59 -----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~   96 (222)
                           .....++..+.+||.+||..+|.+||++.+++.||||+
T Consensus       253 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         253 PQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             chhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                 00124678899999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.63  E-value=7.3e-16  Score=123.98  Aligned_cols=94  Identities=27%  Similarity=0.551  Sum_probs=70.9

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-c------------------c--C-C
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-H------------------K--M-H   57 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~------------------~--~-~   57 (222)
                      |..|+|||++.+. .++.++|+||+|+++|+|++|.+||...... ........ .                  .  . .
T Consensus       164 ~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd07833         164 TRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-DQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPE  242 (288)
T ss_pred             ccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHhhhcccCccccccccCC
Confidence            3569999998888 8999999999999999999999999753222 21111100 0                  0  0 0


Q ss_pred             --------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         58 --------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        58 --------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                              ...+..++..+.+|+++||..+|.+||++++++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         243 PSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                    01223358889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.63  E-value=6.8e-16  Score=121.76  Aligned_cols=93  Identities=28%  Similarity=0.536  Sum_probs=76.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|++||...+..++.++|+||+|+++|+|++|..||....  ................+..++..+.+++.+||..+|
T Consensus       166 ~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  243 (258)
T cd08215         166 TPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--LLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDP  243 (258)
T ss_pred             eecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc--HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            357999999888999999999999999999999999996432  233333333334455566788999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.||||
T Consensus       244 ~~Rp~~~~ll~~~~~  258 (258)
T cd08215         244 EERPSIAQILQSPFI  258 (258)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.63  E-value=7e-16  Score=126.77  Aligned_cols=98  Identities=29%  Similarity=0.406  Sum_probs=73.1

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccCCC--------------------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKMHP--------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~~--------------------   58 (222)
                      |..|+|||.+.+. .++.++|+||+|+++|+|++|.+||..... ....... ...+.+.                    
T Consensus       169 ~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (330)
T cd07834         169 TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY-IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLP  247 (330)
T ss_pred             ccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcc
Confidence            4579999998888 899999999999999999999999975322 1111110 0000000                    


Q ss_pred             --------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         59 --------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        59 --------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                              .....++..+.+++.+||..+|.+||++.+++.||||.+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         248 KKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             cCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence                    01123578899999999999999999999999999998653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.63  E-value=4.2e-16  Score=123.58  Aligned_cols=95  Identities=26%  Similarity=0.359  Sum_probs=75.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      +..|++||.+.+..++.++|+||+|+++|+|++|..||......................|..++..+.+++.+||..+|
T Consensus       162 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  241 (258)
T cd05578         162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDP  241 (258)
T ss_pred             ChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCCh
Confidence            35799999999999999999999999999999999999753321122212222224445566788999999999999999


Q ss_pred             CCCCCh--hhhhcCccc
Q psy14555         81 DKRATA--GELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~--~~~l~h~~~   95 (222)
                      .+||++  .+++.||||
T Consensus       242 ~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         242 QKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             hHcCCccHHHHhcCCCC
Confidence            999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.63  E-value=9.8e-16  Score=121.25  Aligned_cols=93  Identities=25%  Similarity=0.464  Sum_probs=74.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..++.++|+||+|+++|+|++|..||.. .......... ........+...+..+.+++.+||..+|
T Consensus       164 ~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p  241 (256)
T cd08221         164 TPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA-TNPLNLVVKI-VQGNYTPVVSVYSSELISLVHSLLQQDP  241 (256)
T ss_pred             CccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC-CCHHHHHHHH-HcCCCCCCccccCHHHHHHHHHHcccCc
Confidence            5689999999988899999999999999999999999964 2222222222 2333333446678999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.|+|+
T Consensus       242 ~~R~s~~~ll~~~~l  256 (256)
T cd08221         242 EKRPTADEVLDQPLL  256 (256)
T ss_pred             ccCCCHHHHhhCcCC
Confidence            999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.63  E-value=8.6e-16  Score=123.66  Aligned_cols=97  Identities=26%  Similarity=0.486  Sum_probs=73.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-------H--HHHHHhhhccCCCCCCc-cccHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-------Q--AALYRVGFHKMHPEIPA-ELSDKAKQ   70 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-------~--~~~~~~~~~~~~~~~~~-~~~~~~~~   70 (222)
                      |..|++||.+.+..++.++|+||+||++|++++|..||......       .  ............+..+. .++..+.+
T Consensus       165 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd06620         165 TSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRD  244 (284)
T ss_pred             CcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHH
Confidence            56899999998889999999999999999999999999642221       0  01111112222223332 37788999


Q ss_pred             HHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         71 FILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        71 li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      |+.+||..+|.+||++.++++|+||..
T Consensus       245 li~~~l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         245 FVDACLLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             HHHHHhcCCcccCcCHHHHhcCccccc
Confidence            999999999999999999999998864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=6.8e-16  Score=123.65  Aligned_cols=96  Identities=28%  Similarity=0.521  Sum_probs=72.3

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCc-cccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA-ELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||...++ .++.++|+||+||++|+|++|.+||.... . ............+..+. ..+.++.+++.+||..
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  241 (277)
T cd06917         164 TPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD-A-FRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDE  241 (277)
T ss_pred             CcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC-h-hhhhhccccCCCCCCCcccCCHHHHHHHHHHcCC
Confidence            3569999987654 57899999999999999999999996432 1 21111111122223332 3788999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.|+||+..
T Consensus       242 ~p~~R~~~~~il~~~~~~~~  261 (277)
T cd06917         242 EPKERLSAEELLKSKWIKAH  261 (277)
T ss_pred             CcccCcCHHHHhhChHhhcc
Confidence            99999999999999999754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.63  E-value=8.5e-16  Score=120.65  Aligned_cols=92  Identities=39%  Similarity=0.731  Sum_probs=71.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC--ccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~   78 (222)
                      +..|++||.+.+..++.++|+||+|+++|+|++|..||.... .......... ...+..+  ..++..+.+++.+||..
T Consensus       160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~  237 (253)
T cd05122         160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP-PMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQK  237 (253)
T ss_pred             CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc-hHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccC
Confidence            357999999988889999999999999999999999996432 2222222222 2222222  23488999999999999


Q ss_pred             CCCCCCChhhhhcCcc
Q psy14555         79 DPDKRATAGELLEDPF   94 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~   94 (222)
                      +|.+||++.+++.|||
T Consensus       238 ~p~~R~t~~~~l~~~~  253 (253)
T cd05122         238 NPEKRPTAEQLLKHPF  253 (253)
T ss_pred             ChhhCCCHHHHhcCCC
Confidence            9999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.63  E-value=8.6e-16  Score=122.72  Aligned_cols=94  Identities=36%  Similarity=0.692  Sum_probs=71.0

Q ss_pred             CcceecCcccCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCC----CCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSS--YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE----IPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~--y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~   74 (222)
                      |..|++||......  ++.++|+||+|+++|++++|..||... .................    ....++..+.+++.+
T Consensus       173 ~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  251 (272)
T cd06629         173 SVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE-EAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNA  251 (272)
T ss_pred             CccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc-chHHHHHHhhccccCCcCCccccccCCHHHHHHHHH
Confidence            34699999877655  889999999999999999999999532 22222222211111222    223568899999999


Q ss_pred             hcccCCCCCCChhhhhcCccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~   95 (222)
                      ||..+|.+||++.++++|||+
T Consensus       252 ~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         252 CFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HhcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0197|consensus

Probab=99.63  E-value=3.6e-16  Score=130.42  Aligned_cols=85  Identities=20%  Similarity=0.396  Sum_probs=76.7

Q ss_pred             eecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCCC
Q psy14555          4 IFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDK   82 (222)
Q Consensus         4 y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~   82 (222)
                      |+|||.+..+.|+.++|||||||+|||++| |+.||.++  ...........+...+.|..+|+.+.++|..||..+|.+
T Consensus       370 WtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m--sn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~  447 (468)
T KOG0197|consen  370 WTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM--SNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPED  447 (468)
T ss_pred             ecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC--CHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCccc
Confidence            789999999999999999999999999999 99999854  445666666788888999999999999999999999999


Q ss_pred             CCChhhhh
Q psy14555         83 RATAGELL   90 (222)
Q Consensus        83 R~s~~~~l   90 (222)
                      ||||+.+.
T Consensus       448 RPtF~~L~  455 (468)
T KOG0197|consen  448 RPTFETLR  455 (468)
T ss_pred             CCCHHHHH
Confidence            99998664

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.63  E-value=9.5e-16  Score=124.17  Aligned_cols=96  Identities=28%  Similarity=0.494  Sum_probs=72.1

Q ss_pred             cceecCcccCCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC--ccccHHHHHHHHHh
Q psy14555          2 NVIFLTQYSVNSS----YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFILRC   75 (222)
Q Consensus         2 ~~y~aPe~~~~~~----y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~   75 (222)
                      ..|+|||.+.+..    ++.++|+||+|+++|+|++|+.||.... ..............+..+  ..++.++.+|+.+|
T Consensus       178 ~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  256 (296)
T cd06618         178 AAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK-TEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLC  256 (296)
T ss_pred             ccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch-hHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHH
Confidence            5799999887554    8899999999999999999999996421 212222221222222222  24688999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |..+|.+||++.+++.|+||...
T Consensus       257 l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         257 LTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             ccCChhhCCCHHHHhcChhhhcc
Confidence            99999999999999999999753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0607|consensus

Probab=99.62  E-value=3.7e-16  Score=123.52  Aligned_cols=99  Identities=23%  Similarity=0.420  Sum_probs=77.9

Q ss_pred             cceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh------------HH-HHHHh---hhccCCCCC
Q psy14555          2 NVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSP------------QA-ALYRV---GFHKMHPEI   60 (222)
Q Consensus         2 ~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~------------~~-~~~~~---~~~~~~~~~   60 (222)
                      +-|||||++-     ...|+..+|.||+|||+|.||+|.+||.+....            .+ .++..   +...++..-
T Consensus       250 AEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkd  329 (463)
T KOG0607|consen  250 AEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD  329 (463)
T ss_pred             hhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhh
Confidence            5699999542     346999999999999999999999999753221            11 12211   334455566


Q ss_pred             CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         61 PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        61 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                      |..+|.++++++..+|..++..|.++.++++|||+.....
T Consensus       330 WahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  330 WAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             hHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence            7889999999999999999999999999999999987543

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.62  E-value=1e-15  Score=126.64  Aligned_cols=98  Identities=30%  Similarity=0.411  Sum_probs=71.6

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-cc--------------------CCC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HK--------------------MHP   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~--------------------~~~   58 (222)
                      |..|+|||.+.+ ..++.++|+||+||++|+|++|+.||... ........... .+                    ..+
T Consensus       177 ~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (342)
T cd07879         177 TRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK-DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLP  255 (342)
T ss_pred             eecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcC
Confidence            456999998766 46899999999999999999999999743 21111111000 00                    000


Q ss_pred             CC--------CccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         59 EI--------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        59 ~~--------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      ..        ....+..+.+|+.+||+.+|.+||++.+++.||||....
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         256 KYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             CcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            00        123567889999999999999999999999999998753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.62  E-value=1e-15  Score=122.75  Aligned_cols=88  Identities=19%  Similarity=0.413  Sum_probs=70.9

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..|+.++||||+||++|+|++ |..||....  ................+...+..+.+++.+||..+|
T Consensus       188 ~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  265 (280)
T cd05049         188 IRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--NEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDP  265 (280)
T ss_pred             ceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            46999999999999999999999999999998 999996432  233333323333344456788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       266 ~~Rp~~~eil~  276 (280)
T cd05049         266 QQRINIKDIHE  276 (280)
T ss_pred             ccCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.62  E-value=1e-15  Score=121.26  Aligned_cols=95  Identities=28%  Similarity=0.520  Sum_probs=74.4

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCcc--ccHHHHHHHHHhcccC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE--LSDKAKQFILRCFEKD   79 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~l~~~   79 (222)
                      ..|++||......++.++|+||+|+++|++++|..||... .. ......... .....+..  .+..+.+++.+||+.+
T Consensus       165 ~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~  241 (265)
T cd05579         165 PDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGE-TP-EEIFQNILN-GKIEWPEDVEVSDEAIDLISKLLVPD  241 (265)
T ss_pred             ccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-CH-HHHHHHHhc-CCcCCCccccCCHHHHHHHHHHhcCC
Confidence            4699999998888999999999999999999999999642 22 222222111 12223333  3899999999999999


Q ss_pred             CCCCCCh---hhhhcCccccccc
Q psy14555         80 PDKRATA---GELLEDPFLADLT   99 (222)
Q Consensus        80 p~~R~s~---~~~l~h~~~~~~~   99 (222)
                      |.+||++   .+++.||||....
T Consensus       242 p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         242 PEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             HhhcCCCccHHHHhcCccccCCC
Confidence            9999999   9999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.62  E-value=8.7e-16  Score=125.23  Aligned_cols=96  Identities=30%  Similarity=0.555  Sum_probs=72.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh----------------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG----------------------------   52 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~----------------------------   52 (222)
                      |..|++||...+..++.++|+||+||++|+|++|..||....  ........                            
T Consensus       161 ~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (308)
T cd06615         161 TRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA  238 (308)
T ss_pred             CcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence            457999999888889999999999999999999999986322  11111100                            


Q ss_pred             --------hccCCCCCC-ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         53 --------FHKMHPEIP-AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        53 --------~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                              .....+..| ..++.++++|+.+||..+|.+||++.+++.||||...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                    000111111 2367889999999999999999999999999999764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0574|consensus

Probab=99.62  E-value=3.3e-17  Score=128.57  Aligned_cols=97  Identities=31%  Similarity=0.534  Sum_probs=79.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+-|||||++..-+|+.++||||+|+...||..|+|||..... .-.++.+ ......+.-|..+|.++-+|+++||.++
T Consensus       192 TPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP-MRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~  270 (502)
T KOG0574|consen  192 TPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP-MRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKK  270 (502)
T ss_pred             CcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc-cceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCC
Confidence            7889999999999999999999999999999999999975432 2222221 1222333456788999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+|.++.+++.|+|++..
T Consensus       271 PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  271 PEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             HHHHHHHHHHhhhhhhcCC
Confidence            9999999999999999864

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.62  E-value=8.2e-16  Score=123.55  Aligned_cols=94  Identities=27%  Similarity=0.534  Sum_probs=69.3

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--c-----------------cCCCCC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--H-----------------KMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~-----------------~~~~~~   60 (222)
                      |..|+|||++.+ ..++.++|+||+||++|+|++|.+||.+.... ........  .                 ....+.
T Consensus       163 ~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07847         163 TRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-DQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPE  241 (286)
T ss_pred             ccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChHHhhhcccccccccccCCC
Confidence            356899998765 56899999999999999999999999753322 22111100  0                 000000


Q ss_pred             ----------CccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         61 ----------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        61 ----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                                ...++..+.+|+.+||..+|.+||++.+++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         242 PETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence                      12457889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.62  E-value=4.7e-16  Score=141.73  Aligned_cols=94  Identities=19%  Similarity=0.218  Sum_probs=70.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++|||||||++|||++|.+|+...   ...+........ ++.+........+++.+||..+|
T Consensus       178 t~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~P  253 (793)
T PLN00181        178 MSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK---SRTMSSLRHRVL-PPQILLNWPKEASFCLWLLHPEP  253 (793)
T ss_pred             CcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH---HHHHHHHHHhhc-ChhhhhcCHHHHHHHHHhCCCCh
Confidence            56699999999999999999999999999999999887421   111111111111 11111224556789999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.+++.||||...
T Consensus       254 ~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        254 SCRPSMSELLQSEFINEP  271 (793)
T ss_pred             hhCcChHHHhhchhhhhh
Confidence            999999999999999753

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.62  E-value=1.1e-15  Score=122.65  Aligned_cols=96  Identities=32%  Similarity=0.547  Sum_probs=76.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||.+.+..++.++|+||+||++|+|++|..||....  .............+..+..++..+.+++.+||..+|
T Consensus       164 ~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  241 (277)
T cd06641         164 TPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH--PMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP  241 (277)
T ss_pred             CccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc--hHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCCh
Confidence            456999999988889999999999999999999999996432  222222222233334455678999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.+++.||||...
T Consensus       242 ~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         242 SFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             hhCcCHHHHHhCHHHhhh
Confidence            999999999999999753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.62  E-value=5.4e-16  Score=140.83  Aligned_cols=96  Identities=20%  Similarity=0.311  Sum_probs=74.0

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+  ..|+.++|||||||++|+|++|..||..... ...+........ .......+.++.+||..||..
T Consensus       204 Tp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~-~~qli~~lk~~p-~lpi~~~S~eL~dLI~~~L~~  281 (1021)
T PTZ00266        204 TPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN-FSQLISELKRGP-DLPIKGKSKELNILIKNLLNL  281 (1021)
T ss_pred             CccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-HHHHHHHHhcCC-CCCcCCCCHHHHHHHHHHhcC
Confidence            678999998854  4589999999999999999999999975322 222222222221 111234688999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.|+|+...
T Consensus       282 dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        282 SAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             ChhHCcCHHHHhccHHHhhc
Confidence            99999999999999999754

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.62  E-value=1.1e-15  Score=124.68  Aligned_cols=96  Identities=26%  Similarity=0.506  Sum_probs=73.3

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |..|+|||.+.   .+.++.++||||+||++|+|++|..||.... .............+.......+..+.+++.+||.
T Consensus       174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  252 (308)
T cd06634         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ  252 (308)
T ss_pred             CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc-HHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhh
Confidence            46799999864   4568899999999999999999999986432 2222222222222222334678889999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+|.+||++.+++.|+|+..
T Consensus       253 ~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         253 KIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             CCcccCCCHHHHhhCccccc
Confidence            99999999999999999865

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.62  E-value=8.6e-16  Score=123.22  Aligned_cols=89  Identities=15%  Similarity=0.321  Sum_probs=71.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..++.++||||+||++|+|++ |..||...  .................+..++..+.+++.+||..+|
T Consensus       185 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p  262 (277)
T cd05036         185 IKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR--TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTP  262 (277)
T ss_pred             HhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            35999999999999999999999999999997 99999743  2233333323333444566788999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.|
T Consensus       263 ~~Rps~~~vl~~  274 (277)
T cd05036         263 EDRPNFATILER  274 (277)
T ss_pred             ccCcCHHHHHHH
Confidence            999999999876

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.62  E-value=8e-16  Score=126.81  Aligned_cols=101  Identities=23%  Similarity=0.382  Sum_probs=73.6

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC---CCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---PEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li   72 (222)
                      |..|+|||++.     ...|+.++||||+||++|+|++|+.||... ...............   +..+..++..+++|+
T Consensus       166 t~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li  244 (332)
T cd05623         166 TPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKERFQFPAQVTDVSEDAKDLI  244 (332)
T ss_pred             CccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC-CHHHHHHHHhCCCccccCCCccccCCHHHHHHH
Confidence            56899999875     456899999999999999999999999743 222222222211111   222345799999999


Q ss_pred             HHhcccCCCC--CCChhhhhcCcccccccccc
Q psy14555         73 LRCFEKDPDK--RATAGELLEDPFLADLTATR  102 (222)
Q Consensus        73 ~~~l~~~p~~--R~s~~~~l~h~~~~~~~~~~  102 (222)
                      .+|+..++.+  |+++.+++.||||.+..+..
T Consensus       245 ~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~~  276 (332)
T cd05623         245 RRLICSREHRLGQNGIEDFKQHPFFTGIDWDN  276 (332)
T ss_pred             HHHccChhhhcCCCCHHHHhCCCCcCCCCHHH
Confidence            9999665444  68999999999999866543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0595|consensus

Probab=99.62  E-value=6.7e-16  Score=125.22  Aligned_cols=98  Identities=27%  Similarity=0.587  Sum_probs=79.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++..+.|+.|+|+||+|+|+|+|++|++||... ...+...... .....+..+...+....+++...+..+
T Consensus       177 SplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~-t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~  255 (429)
T KOG0595|consen  177 SPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE-TPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRN  255 (429)
T ss_pred             CccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc-CHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcC
Confidence            68999999999999999999999999999999999999742 2333332222 223344556677888889999999999


Q ss_pred             CCCCCChhhhhcCccccccc
Q psy14555         80 PDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~~   99 (222)
                      +..|.++.+...|+++....
T Consensus       256 ~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  256 PKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             ccccCchHHhhhhhhcccCc
Confidence            99999999999999987643

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.61  E-value=6.6e-16  Score=121.32  Aligned_cols=87  Identities=24%  Similarity=0.403  Sum_probs=70.4

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      ..|+|||...+..++.++|+||+||++|+|++|..|+...  +.. .    ........|..++..+++++.+||..+|.
T Consensus       146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~--~~~-~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~  218 (237)
T cd05576         146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECH--PSG-I----NTHTTLNIPEWVSEEARSLLQQLLQFNPT  218 (237)
T ss_pred             ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcC--chh-c----ccccccCCcccCCHHHHHHHHHHccCCHH
Confidence            4699999998889999999999999999999999887521  111 1    11122234566889999999999999999


Q ss_pred             CCCCh-----hhhhcCccc
Q psy14555         82 KRATA-----GELLEDPFL   95 (222)
Q Consensus        82 ~R~s~-----~~~l~h~~~   95 (222)
                      +|+++     .+++.||||
T Consensus       219 ~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         219 ERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HhcCCCccchHHHHcCCCC
Confidence            99986     899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.61  E-value=1.1e-15  Score=126.50  Aligned_cols=97  Identities=30%  Similarity=0.426  Sum_probs=70.9

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCC---------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~---------------------   57 (222)
                      |..|+|||.+.+ ..++.++|+||+||++|++++|+.||.... .......... ...+                     
T Consensus       178 ~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (343)
T cd07851         178 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSD-HIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLP  256 (343)
T ss_pred             cccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhcc
Confidence            457999998765 467899999999999999999999996432 2211111100 0000                     


Q ss_pred             ----C---CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         58 ----P---EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        58 ----~---~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                          .   ......+..+.+|+.+||..+|.+||++.+++.||||...
T Consensus       257 ~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~  304 (343)
T cd07851         257 QMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY  304 (343)
T ss_pred             ccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence                0   0112358899999999999999999999999999999864

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.61  E-value=1.5e-15  Score=123.49  Aligned_cols=94  Identities=23%  Similarity=0.343  Sum_probs=66.3

Q ss_pred             cceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCC--------------------
Q psy14555          2 NVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPE--------------------   59 (222)
Q Consensus         2 ~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~--------------------   59 (222)
                      ..|+|||.+.+. .++.++|+||+|+++|+|++|.+||................ ..++.                    
T Consensus       187 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (310)
T cd07865         187 LWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQ  266 (310)
T ss_pred             ccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCcc
Confidence            469999977654 47899999999999999999999996432211111000000 00000                    


Q ss_pred             --------CCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         60 --------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        60 --------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                              .+...+..+.+|+.+||..+|.+||++++++.||||
T Consensus       267 ~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         267 KRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             chhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                    011235678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.61  E-value=1.3e-15  Score=130.59  Aligned_cols=97  Identities=22%  Similarity=0.301  Sum_probs=69.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------hHHHHHHhhhc-c-----CC-----------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS------PQAALYRVGFH-K-----MH-----------   57 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~------~~~~~~~~~~~-~-----~~-----------   57 (222)
                      |..|+|||++.+..|+.++||||+||++|||++|..|+.....      ....+...... .     ..           
T Consensus       325 T~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~  404 (461)
T PHA03211        325 TVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQY  404 (461)
T ss_pred             CcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHH
Confidence            6789999999999999999999999999999998765432111      11111111100 0     00           


Q ss_pred             -------------CCCC---ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         58 -------------PEIP---AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        58 -------------~~~~---~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                                   ...|   ..++..+.+|+.+||..||.+||++.++++||||+.
T Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        405 RHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                         0001   134568899999999999999999999999999964

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.61  E-value=1.8e-15  Score=122.09  Aligned_cols=98  Identities=31%  Similarity=0.541  Sum_probs=73.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHhhhccCCCCCC------ccccHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS---PQAALYRVGFHKMHPEIP------AELSDKAKQF   71 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~l   71 (222)
                      |..|++||.+.+..|+.++|+||+||++|+|++|..||.....   ..............+..+      ..+++.+.++
T Consensus       166 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  245 (287)
T cd06621         166 TSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDF  245 (287)
T ss_pred             CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHH
Confidence            4579999999999999999999999999999999999964311   111222211111111111      2356789999


Q ss_pred             HHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         72 ILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        72 i~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +.+||..+|.+||++.+++.|+||+..
T Consensus       246 i~~~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         246 IKQCLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             HHHHcCCCcccCCCHHHHHhCcccccc
Confidence            999999999999999999999999653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.61  E-value=2.6e-15  Score=123.75  Aligned_cols=97  Identities=24%  Similarity=0.345  Sum_probs=70.8

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhc--cCCC------------------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFH--KMHP------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~--~~~~------------------   58 (222)
                      |..|++||.+.+. .++.++|+||+||++|+|++|.+||...... ...... ...  ....                  
T Consensus       196 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (335)
T PTZ00024        196 TLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI-DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRK  274 (335)
T ss_pred             ccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCchhhCcchhhcccccccCcCC
Confidence            3579999988764 4789999999999999999999999753322 111111 000  0000                  


Q ss_pred             -----CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 -----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 -----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                           ......+..+.+++.+||..+|.+||++++++.|+||+..
T Consensus       275 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        275 PKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             cccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence                 0012347889999999999999999999999999999864

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.61  E-value=9.1e-16  Score=124.06  Aligned_cols=97  Identities=27%  Similarity=0.440  Sum_probs=71.5

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC------------------CC-
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH------------------PE-   59 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~------------------~~-   59 (222)
                      |..|++||++.+ ..++.++|+||+||++|+|++|.+||.... ......... ....+                  +. 
T Consensus       166 ~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (294)
T PLN00009        166 TLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDS-EIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKW  244 (294)
T ss_pred             eecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhccccccchhhhhhcccC
Confidence            357999998765 457899999999999999999999996432 222222110 00000                  00 


Q ss_pred             -------CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         60 -------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        60 -------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                             .....+..+.+++.+||..+|.+||++.+++.||||...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        245 PPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             CCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence                   113467889999999999999999999999999999864

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.61  E-value=1.8e-15  Score=122.09  Aligned_cols=96  Identities=15%  Similarity=0.390  Sum_probs=75.9

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||.+.++.++.++|+||+||++|+|++ |.+||....  ................+...+..+.+++.+||..+|
T Consensus       185 ~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  262 (288)
T cd05061         185 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNP  262 (288)
T ss_pred             ccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            45999999999999999999999999999998 789996432  233333322333334455678899999999999999


Q ss_pred             CCCCChhhhhc------Cccccccc
Q psy14555         81 DKRATAGELLE------DPFLADLT   99 (222)
Q Consensus        81 ~~R~s~~~~l~------h~~~~~~~   99 (222)
                      .+||++.++++      ||||.+..
T Consensus       263 ~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         263 KMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             hHCcCHHHHHHHHHhhcCCCCCCCC
Confidence            99999999876      88887654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.61  E-value=1.6e-15  Score=123.32  Aligned_cols=94  Identities=22%  Similarity=0.407  Sum_probs=66.6

Q ss_pred             cceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC--------------------CCCC
Q psy14555          2 NVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--------------------HPEI   60 (222)
Q Consensus         2 ~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--------------------~~~~   60 (222)
                      ..|+|||.+.+ ..++.++|+||+||++|+|++|++||..................                    ....
T Consensus       190 ~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (311)
T cd07866         190 RWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNY  269 (311)
T ss_pred             cCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCC
Confidence            45999997655 45899999999999999999999999643221111100000000                    0000


Q ss_pred             C-------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         61 P-------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        61 ~-------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                      +       ...+..+.+++.+||..+|.+||++.+++.||||
T Consensus       270 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         270 PRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             CccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            1       1244678899999999999999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.61  E-value=2e-15  Score=119.27  Aligned_cols=93  Identities=29%  Similarity=0.433  Sum_probs=75.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      +..|++||.+.+..++.++|+||+|+++|+|++|+.||....  .............+..+...+.++.+++.+||..+|
T Consensus       164 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (256)
T cd08530         164 TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS--MQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKP  241 (256)
T ss_pred             CccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCc
Confidence            457999999999999999999999999999999999997432  222222223334444556788999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+||++.+++.||++
T Consensus       242 ~~Rp~~~~~l~~p~~  256 (256)
T cd08530         242 KLRPNCDKILASPAV  256 (256)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.61  E-value=1.7e-15  Score=121.77  Aligned_cols=95  Identities=25%  Similarity=0.390  Sum_probs=68.2

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccC--------------------C-
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKM--------------------H-   57 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~--------------------~-   57 (222)
                      |..|+|||.+.+. .++.++||||+||++|+|++|.+||..... ......... ...                    . 
T Consensus       163 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07832         163 TRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPE  241 (286)
T ss_pred             cccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHHHHcCCCChHHHhhccCcchhhcccCCC
Confidence            4579999987654 468999999999999999999888864322 111111100 000                    0 


Q ss_pred             -C-----CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccc
Q psy14555         58 -P-----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        58 -~-----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~   96 (222)
                       .     ......+..+.+++.+||..+|.+||++++++.||||.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         242 SKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence             0     01123568899999999999999999999999999983

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.61  E-value=1.4e-15  Score=125.54  Aligned_cols=98  Identities=26%  Similarity=0.373  Sum_probs=71.0

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-----------------------hccC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-----------------------FHKM   56 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-----------------------~~~~   56 (222)
                      |..|+|||.+.. ..++.++|+||+||++|+|++|.+||..............                       ....
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (337)
T cd07858         171 TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPY  250 (337)
T ss_pred             ccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCc
Confidence            457999997765 5689999999999999999999999964321110000000                       0000


Q ss_pred             CC-----CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         57 HP-----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        57 ~~-----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..     .....++..+.+++.+||..+|.+||++.+++.||||...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         251 TPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             ccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            00     1123568889999999999999999999999999999764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.61  E-value=2.3e-15  Score=123.28  Aligned_cols=96  Identities=29%  Similarity=0.536  Sum_probs=73.5

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |..|+|||.+.   .+.++.++|+||+||++|+|++|.+||... .....................++..+.+++.+||.
T Consensus       184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  262 (317)
T cd06635         184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQ  262 (317)
T ss_pred             CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc-cHHHHHHHHHhccCCCCCCccccHHHHHHHHHHcc
Confidence            45799999873   467899999999999999999999998643 22222222222222223344578889999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+|.+||++.+++.|+|+..
T Consensus       263 ~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         263 KIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             CCcccCcCHHHHHhChhhhc
Confidence            99999999999999999854

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2.8e-15  Score=119.39  Aligned_cols=93  Identities=32%  Similarity=0.640  Sum_probs=76.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||.+.+..++.++|+||+||++|++++|++||... .....+.........+..|..+++.+.+++.+||. +|
T Consensus       172 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~  249 (264)
T cd06653         172 TPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY-EAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EE  249 (264)
T ss_pred             cccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc-CHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-Cc
Confidence            45799999999989999999999999999999999999653 22333333333444456678899999999999999 57


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      ..||++.+++.|||.
T Consensus       250 ~~r~~~~~~~~~~~~  264 (264)
T cd06653         250 KRRPTAEFLLRHPFV  264 (264)
T ss_pred             ccCccHHHHhcCCCC
Confidence            999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.60  E-value=2.1e-15  Score=120.07  Aligned_cols=88  Identities=19%  Similarity=0.379  Sum_probs=72.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..++.++|+||+||++|+|++ |..||...  .................+...+..+.+++.+||..+|
T Consensus       169 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  246 (263)
T cd05052         169 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNP  246 (263)
T ss_pred             cccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            35999999999999999999999999999998 99999743  2333333333344555667789999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++++
T Consensus       247 ~~Rp~~~~l~~  257 (263)
T cd05052         247 SDRPSFAEIHQ  257 (263)
T ss_pred             ccCCCHHHHHH
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.60  E-value=2.8e-15  Score=121.37  Aligned_cols=98  Identities=23%  Similarity=0.340  Sum_probs=70.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCC--------------------C
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMH--------------------P   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~--------------------~   58 (222)
                      |..|+|||.+.+ ..++.++|+||+||++|+|++|.+||...... ........ ...+                    .
T Consensus       165 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (298)
T cd07841         165 TRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFP  243 (298)
T ss_pred             ceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccccccccccccC
Confidence            356999997754 46789999999999999999998888643221 11111100 0000                    0


Q ss_pred             -----CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         59 -----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        59 -----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                           ......+..+.+++.+||..+|.+||++.+++.|+||++..
T Consensus       244 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         244 PTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             CcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence                 01123478899999999999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.60  E-value=2.2e-15  Score=119.56  Aligned_cols=88  Identities=15%  Similarity=0.249  Sum_probs=71.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+....++.++|+||+||++|||++ |.+||....  .............+..|..++.++.+++.+||+.+|
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p  239 (257)
T cd05116         162 VKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--GNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGV  239 (257)
T ss_pred             ccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCc
Confidence            57999999988899999999999999999998 999996432  233333333344455677789999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++..
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05116         240 DERPGFAVVEL  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.60  E-value=1.9e-15  Score=120.55  Aligned_cols=88  Identities=16%  Similarity=0.372  Sum_probs=71.0

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..|+.++|+||+||++|++++ |..||....  ..............+.+..++..+.+++.+||..+|
T Consensus       172 ~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p  249 (266)
T cd05064         172 VLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS--GQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKER  249 (266)
T ss_pred             eeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            57999999999999999999999999999875 999997532  233333333334445567789999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++++
T Consensus       250 ~~RP~~~~i~~  260 (266)
T cd05064         250 GERPRFSQIHS  260 (266)
T ss_pred             hhCCCHHHHHH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.60  E-value=1.8e-15  Score=121.49  Aligned_cols=94  Identities=22%  Similarity=0.412  Sum_probs=69.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccC-----------------C---C-
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKM-----------------H---P-   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~-----------------~---~-   58 (222)
                      |..|++||++.+..++.++|+||+||++|+|++|.+||...... ....+... ...                 .   . 
T Consensus       169 ~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (287)
T cd07838         169 TLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPR  247 (287)
T ss_pred             cccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcCCCcccchhhccccccc
Confidence            35699999999999999999999999999999999999743221 11111100 000                 0   0 


Q ss_pred             ---CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 ---EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 ---~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                         ......+..+.+++.+||..+|.+||++.+++.||||
T Consensus       248 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         248 SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence               0012346778899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.60  E-value=3.9e-15  Score=122.66  Aligned_cols=98  Identities=24%  Similarity=0.402  Sum_probs=71.0

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHH---------------h----------hhc
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---------------V----------GFH   54 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~---------------~----------~~~   54 (222)
                      |..|+|||...+ ..++.++|+||+||++|++++|.+||..... ......               .          ...
T Consensus       172 ~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (332)
T cd07857         172 TRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY-VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLP  250 (332)
T ss_pred             CccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhcc
Confidence            457999997665 5789999999999999999999999964221 111000               0          000


Q ss_pred             cCC----CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         55 KMH----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        55 ~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      ...    .......+..+.+++.+||..+|.+||++.+++.|||++...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         251 NIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             ccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence            000    011123578899999999999999999999999999997654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.60  E-value=2.1e-15  Score=124.30  Aligned_cols=98  Identities=20%  Similarity=0.335  Sum_probs=71.1

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-----------------------hccC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-----------------------FHKM   56 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-----------------------~~~~   56 (222)
                      |..|++||.+.+ ..++.++|+||+||++|+|++|++||..............                       ....
T Consensus       174 ~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  253 (334)
T cd07855         174 TRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPR  253 (334)
T ss_pred             cccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhccc
Confidence            346899997755 5689999999999999999999999965322111000000                       0000


Q ss_pred             CCCC-----CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         57 HPEI-----PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        57 ~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ....     ....+..+.+++.+||+.+|.+||++++++.||||.+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~  300 (334)
T cd07855         254 KQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY  300 (334)
T ss_pred             CCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence            0111     13468899999999999999999999999999999864

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.60  E-value=1.8e-15  Score=121.04  Aligned_cols=92  Identities=27%  Similarity=0.481  Sum_probs=74.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||......++.++|+||+|++++++++|..||....  ........ .......+..++..+.+|+.+||..+|
T Consensus       185 ~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p  261 (280)
T cd05581         185 TAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN--EYLTFQKI-LKLEYSFPPNFPPDAKDLIEKLLVLDP  261 (280)
T ss_pred             CccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHH-HhcCCCCCCccCHHHHHHHHHHhcCCH
Confidence            356999999888889999999999999999999999997432  22222211 123334556678999999999999999


Q ss_pred             CCCCCh----hhhhcCccc
Q psy14555         81 DKRATA----GELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~----~~~l~h~~~   95 (222)
                      .+||++    .+++.||||
T Consensus       262 ~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         262 QDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             hhCCCcccCHHHHhcCCCC
Confidence            999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.60  E-value=2.6e-15  Score=118.23  Aligned_cols=92  Identities=30%  Similarity=0.510  Sum_probs=75.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||...+..++.++|+||+|+++|++++|..||...  ........... .....+...+..+.+++.+||..+|
T Consensus       156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~--~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~l~~~p  232 (250)
T cd05123         156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE--DRKEIYEKILK-DPLRFPEFLSPEARDLISGLLQKDP  232 (250)
T ss_pred             CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHhcCCH
Confidence            45799999998888999999999999999999999999643  22333222222 3455667779999999999999999


Q ss_pred             CCCCCh---hhhhcCccc
Q psy14555         81 DKRATA---GELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~---~~~l~h~~~   95 (222)
                      .+||++   .+++.||||
T Consensus       233 ~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         233 TKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hhCCCcccHHHHHhCCCC
Confidence            999999   899999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.60  E-value=2.5e-15  Score=120.81  Aligned_cols=93  Identities=29%  Similarity=0.519  Sum_probs=67.7

Q ss_pred             cceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--cc-----------------C-CC--
Q psy14555          2 NVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HK-----------------M-HP--   58 (222)
Q Consensus         2 ~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~-----------------~-~~--   58 (222)
                      ..|+|||++.+ ..++.++|+||+||++|+|++|.+||..... .........  ..                 . .+  
T Consensus       164 ~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
T cd07846         164 RWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEV  242 (286)
T ss_pred             eeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHHHhCCCchhhHHHhccchHhhccccccc
Confidence            46999998765 4578899999999999999999999964221 111111000  00                 0 00  


Q ss_pred             -------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 -------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 -------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                             ..+..++..+.+|+.+||..+|.+||++.+++.|+||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         243 KEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                   0123467889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.59  E-value=3.3e-15  Score=120.73  Aligned_cols=94  Identities=28%  Similarity=0.481  Sum_probs=68.6

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hc------------------------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FH------------------------   54 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~------------------------   54 (222)
                      |..|+|||.+.+. .++.++|+||+|+++|+|++|.+||..... .....+.. ..                        
T Consensus       169 ~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (293)
T cd07843         169 TLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE-IDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTK  247 (293)
T ss_pred             cccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhhccchhccccccc
Confidence            4569999987654 468999999999999999999999964322 11111100 00                        


Q ss_pred             ----cCCCCCCcc-ccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         55 ----KMHPEIPAE-LSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        55 ----~~~~~~~~~-~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                          ......+.. +++.+.+++.+||..+|++||++.+++.|+||
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         248 YPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             ccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                000112222 58889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=3e-15  Score=117.96  Aligned_cols=93  Identities=41%  Similarity=0.839  Sum_probs=75.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||...+..++.++|+||+|+++|+|++|..||.... ........ .....+..+..++..+.+++.+||..+|
T Consensus       162 ~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p  239 (254)
T cd06627         162 TPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN-PMAALFRI-VQDDHPPLPEGISPELKDFLMQCFQKDP  239 (254)
T ss_pred             chhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHH-hccCCCCCCCCCCHHHHHHHHHHHhCCh
Confidence            356999999888889999999999999999999999997532 22222222 2233445566788999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      ++||++.+++.|+||
T Consensus       240 ~~R~~~~~~l~~~~~  254 (254)
T cd06627         240 NLRPTAKQLLKHPWI  254 (254)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.59  E-value=3e-15  Score=121.34  Aligned_cols=89  Identities=20%  Similarity=0.392  Sum_probs=71.7

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||+..+..|+.++||||+||++|+|++ |.+||...  .................+..++..+.+|+.+||..+|
T Consensus       182 ~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  259 (297)
T cd05089         182 VRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM--TCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRP  259 (297)
T ss_pred             ccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            35999999999999999999999999999997 99999643  2233333333334445566788999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++++++..
T Consensus       260 ~~Rp~~~~i~~~  271 (297)
T cd05089         260 YERPPFAQISVQ  271 (297)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.59  E-value=2.7e-15  Score=121.11  Aligned_cols=88  Identities=19%  Similarity=0.403  Sum_probs=70.2

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..++.++|+||+||++|+|++ |.+||....  ................+...+..+.+|+.+||..+|
T Consensus       186 ~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p  263 (288)
T cd05093         186 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--NNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREP  263 (288)
T ss_pred             ccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCCh
Confidence            46999999999999999999999999999998 999996532  222323323333344456678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       264 ~~Rpt~~~v~~  274 (288)
T cd05093         264 HMRLNIKEIHS  274 (288)
T ss_pred             hhCCCHHHHHH
Confidence            99999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0659|consensus

Probab=99.59  E-value=4e-15  Score=114.83  Aligned_cols=98  Identities=18%  Similarity=0.284  Sum_probs=72.8

Q ss_pred             CcceecCccc-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC--CC------------------
Q psy14555          1 MNVIFLTQYS-VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH--PE------------------   59 (222)
Q Consensus         1 t~~y~aPe~~-~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~------------------   59 (222)
                      |.-|-|||.+ ..+.|+..+|+||+|||+.||+.|.|-|++.++-++........+.+  ..                  
T Consensus       164 TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~  243 (318)
T KOG0659|consen  164 TRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPK  243 (318)
T ss_pred             eeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCC
Confidence            5669999954 45679999999999999999999999888644333322111111111  01                  


Q ss_pred             -----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         60 -----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        60 -----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                           .....+.++.+|+.+||..||.+|+++.|++.|+||+..
T Consensus       244 ~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  244 PPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             CccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence                 112357788999999999999999999999999999863

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.59  E-value=2.9e-15  Score=121.06  Aligned_cols=88  Identities=19%  Similarity=0.423  Sum_probs=70.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..++.++|+||+||++|+|++ |.+||....  .............+..+...+..+.+++.+||..+|
T Consensus       189 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  266 (291)
T cd05094         189 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS--NTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREP  266 (291)
T ss_pred             eeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccCh
Confidence            46999999999999999999999999999998 999986432  222333333334444456678899999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++++
T Consensus       267 ~~Rpt~~~v~~  277 (291)
T cd05094         267 QQRLNIKEIYK  277 (291)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.59  E-value=2.4e-15  Score=124.32  Aligned_cols=90  Identities=21%  Similarity=0.396  Sum_probs=71.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..|+.++||||+||++|+|++ |..||..... ................+...+.++.+++.+||+.+|
T Consensus       239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  317 (337)
T cd05054         239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-DEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNP  317 (337)
T ss_pred             ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc-cHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCCh
Confidence            46999999999999999999999999999998 9999975322 222222222333344456678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.|
T Consensus       318 ~~RPs~~ell~~  329 (337)
T cd05054         318 EDRPTFSELVEI  329 (337)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.59  E-value=2.5e-15  Score=125.94  Aligned_cols=89  Identities=18%  Similarity=0.362  Sum_probs=70.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|||||++.+..|+.++||||+||++|+|++ |+.||..... ................+...+.++.+++.+||..+|
T Consensus       278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  356 (374)
T cd05106         278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV-NSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEP  356 (374)
T ss_pred             cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc-cHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCCh
Confidence            45999999999999999999999999999997 9999975322 222223223333444555678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++++
T Consensus       357 ~~RPs~~~l~~  367 (374)
T cd05106         357 TERPTFSQISQ  367 (374)
T ss_pred             hhCcCHHHHHH
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.59  E-value=3.4e-15  Score=119.72  Aligned_cols=93  Identities=25%  Similarity=0.453  Sum_probs=69.2

Q ss_pred             cceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc--cC-------------------C--
Q psy14555          2 NVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH--KM-------------------H--   57 (222)
Q Consensus         2 ~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~--~~-------------------~--   57 (222)
                      ..|++||.+.+. .++.++|+||+|+++|+|++|++||..... ..........  ..                   .  
T Consensus       162 ~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd05118         162 RWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-IDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKK  240 (283)
T ss_pred             ccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccc
Confidence            468999987776 789999999999999999999999964322 1111111000  00                   0  


Q ss_pred             -----CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         58 -----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        58 -----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                           ......++..+.+++.+||..+|.+||++.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         241 AGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             cccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                 01123467889999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.59  E-value=3e-15  Score=119.42  Aligned_cols=89  Identities=24%  Similarity=0.453  Sum_probs=72.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||++.+..++.++||||+||++|||++ |.+||.+..  ................+..++..+.+++.+||..+|
T Consensus       179 ~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  256 (273)
T cd05035         179 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--NHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADP  256 (273)
T ss_pred             ccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCCh
Confidence            47999999988999999999999999999999 999997532  233333333344455667789999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       257 ~~Rp~~~e~~~~  268 (273)
T cd05035         257 KDRPTFTKLREV  268 (273)
T ss_pred             hhCcCHHHHHHH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.59  E-value=2.8e-15  Score=120.23  Aligned_cols=89  Identities=17%  Similarity=0.357  Sum_probs=71.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|||||.+.++.++.++|+||+||++|+|++ |..||.+.  .................+...+..+.+++.+||..+|
T Consensus       185 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  262 (277)
T cd05062         185 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM--SNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNP  262 (277)
T ss_pred             HhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence            46999999999999999999999999999999 78999753  2233333323333344566778899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       263 ~~Rps~~e~l~~  274 (277)
T cd05062         263 KMRPSFLEIISS  274 (277)
T ss_pred             hhCcCHHHHHHH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.58  E-value=3.5e-15  Score=119.90  Aligned_cols=90  Identities=16%  Similarity=0.300  Sum_probs=72.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.++.++.++||||+||++|||++ |..||...  .................+..++..+.+++.+||+.+
T Consensus       189 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~  266 (283)
T cd05091         189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEF  266 (283)
T ss_pred             CccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCC
Confidence            357999999998999999999999999999998 88898643  223333333334444556778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++..
T Consensus       267 p~~RP~~~~i~~~  279 (283)
T cd05091         267 PSRRPRFKDIHSR  279 (283)
T ss_pred             cccCCCHHHHHHH
Confidence            9999999999763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG1026|consensus

Probab=99.58  E-value=1.5e-15  Score=132.90  Aligned_cols=87  Identities=17%  Similarity=0.413  Sum_probs=75.9

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      -||+||.|..++|+.++||||+||+|||+++ |+-||.+..  .+++......+...+.|..++..+.+||..||+.+|+
T Consensus       670 RWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS--n~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~  747 (774)
T KOG1026|consen  670 RWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS--NQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPK  747 (774)
T ss_pred             ecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc--hHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcc
Confidence            3899999999999999999999999999999 999998653  3555555555666888999999999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||++++|-.
T Consensus       748 ~RPsF~eI~~  757 (774)
T KOG1026|consen  748 RRPSFKEIHS  757 (774)
T ss_pred             cCCCHHHHHH
Confidence            9999999843

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.58  E-value=4.4e-15  Score=117.66  Aligned_cols=88  Identities=25%  Similarity=0.341  Sum_probs=70.0

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..++.++|+||+|+++|+|++ |++||...  .................+...+..+.+++.+||..+|
T Consensus       165 ~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p  242 (256)
T cd05114         165 VKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK--SNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKP  242 (256)
T ss_pred             hhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            36999999999999999999999999999999 99999643  2222222223333344456678899999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       243 ~~Rps~~~l~~  253 (256)
T cd05114         243 EGRPTFAELLR  253 (256)
T ss_pred             ccCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.58  E-value=2.3e-15  Score=119.96  Aligned_cols=93  Identities=29%  Similarity=0.525  Sum_probs=68.2

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC---CCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~   74 (222)
                      |..|++||.+.   ...++.++|+||+||++|+|++|.+||.... ..............+   .....++..+.+|+.+
T Consensus       169 ~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  247 (267)
T cd06646         169 TPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH-PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKI  247 (267)
T ss_pred             CccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc-hhhhheeeecCCCCCCCCccccccCHHHHHHHHH
Confidence            35799999874   4557889999999999999999999985322 111111111111111   1123468899999999


Q ss_pred             hcccCCCCCCChhhhhcCcc
Q psy14555         75 CFEKDPDKRATAGELLEDPF   94 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~   94 (222)
                      ||..+|.+||++++++.|+|
T Consensus       248 ~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         248 SLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HhhCChhhCcCHHHHhcCCC
Confidence            99999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0671|consensus

Probab=99.58  E-value=2.7e-16  Score=126.49  Aligned_cols=97  Identities=26%  Similarity=0.388  Sum_probs=71.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHH--hhhccC-----------------CCCCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR--VGFHKM-----------------HPEIP   61 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~--~~~~~~-----------------~~~~~   61 (222)
                      |.-|-|||++++-+.+.+|||||+||||+|+.+|...|....+ .+.+..  .+....                 ...++
T Consensus       272 TRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen-~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~  350 (415)
T KOG0671|consen  272 TRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN-LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWP  350 (415)
T ss_pred             ccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc-HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCc
Confidence            6679999999999999999999999999999999999976432 221111  000000                 01111


Q ss_pred             cc-------------------------ccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         62 AE-------------------------LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        62 ~~-------------------------~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..                         .-.++.+|+.+||..||.+|+|+.+++.||||...
T Consensus       351 e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  351 EVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             cccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence            10                         11235699999999999999999999999999753

>KOG0585|consensus

Probab=99.58  E-value=3.5e-15  Score=123.28  Aligned_cols=96  Identities=24%  Similarity=0.425  Sum_probs=75.1

Q ss_pred             CcceecCcccCCCC---C-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSS---Y-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~---y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+++||||.+.++.   | +.+.||||+||+||.|+.|+.||..  +.....+..+ ......+......+++++||++|
T Consensus       278 TPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~--~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~l  355 (576)
T KOG0585|consen  278 TPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD--DFELELFDKIVNDPLEFPENPEINEDLKDLIKRL  355 (576)
T ss_pred             CccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc--chHHHHHHHHhcCcccCCCcccccHHHHHHHHHH
Confidence            89999999777732   3 5689999999999999999999963  3333333332 22222333345799999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||..|++..++..|||....
T Consensus       356 L~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  356 LEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             hhcChhheeehhhheecceeccC
Confidence            99999999999999999998764

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.58  E-value=3.8e-15  Score=119.73  Aligned_cols=88  Identities=18%  Similarity=0.383  Sum_probs=70.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..++.++|+||+||++|+|++ |.+||....  ................+..++..+.+++.+||..+|
T Consensus       188 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P  265 (280)
T cd05092         188 IRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS--NTEAIECITQGRELERPRTCPPEVYAIMQGCWQREP  265 (280)
T ss_pred             ccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC--HHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCh
Confidence            46999999999999999999999999999998 999996432  222222223333344556788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       266 ~~Rp~~~~l~~  276 (280)
T cd05092         266 QQRMVIKDIHS  276 (280)
T ss_pred             hhCCCHHHHHH
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG0663|consensus

Probab=99.58  E-value=7.3e-15  Score=116.75  Aligned_cols=99  Identities=23%  Similarity=0.343  Sum_probs=73.9

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC-------------------CC-
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH-------------------PE-   59 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~-------------------~~-   59 (222)
                      |.-|-|||.+++. .|+.++|+||+|||+.||+.++|-|++.+...+.-......+.+                   +. 
T Consensus       240 TLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~  319 (419)
T KOG0663|consen  240 TLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEH  319 (419)
T ss_pred             EeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCC
Confidence            5679999966654 69999999999999999999999998755433322111111111                   00 


Q ss_pred             --------CCc-cccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         60 --------IPA-ELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        60 --------~~~-~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                              ++. .+++...+|+.++|..||.+|.|+.+++.|.||....
T Consensus       320 pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  320 PYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             CchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence                    111 1568889999999999999999999999999998743

>KOG0658|consensus

Probab=99.58  E-value=2.4e-15  Score=120.56  Aligned_cols=101  Identities=23%  Similarity=0.375  Sum_probs=76.1

Q ss_pred             CcceecCcccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC---------------------C
Q psy14555          1 MNVIFLTQYSV-NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---------------------P   58 (222)
Q Consensus         1 t~~y~aPe~~~-~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---------------------~   58 (222)
                      |.+|-|||-+. ...|+.+.||||+|||+.||+-|++-|++.+...+........+.+                     .
T Consensus       188 SRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~  267 (364)
T KOG0658|consen  188 SRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKA  267 (364)
T ss_pred             eccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccc
Confidence            57899999554 5579999999999999999999999998754433332222111111                     0


Q ss_pred             C-----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccccc
Q psy14555         59 E-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTAT  101 (222)
Q Consensus        59 ~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~~  101 (222)
                      .     .....++++.+|+.++|..+|.+|.++.+++.||||......
T Consensus       268 ~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  268 HPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             ccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence            0     123468999999999999999999999999999999865433

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.58  E-value=4.3e-15  Score=119.45  Aligned_cols=89  Identities=13%  Similarity=0.339  Sum_probs=71.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||+..+..++.++|+||+||++|+|++ |.+||.+..  ...+............+..++..+.+++.+||..+|
T Consensus       190 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  267 (283)
T cd05090         190 IRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGP  267 (283)
T ss_pred             ceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCc
Confidence            46999999988899999999999999999998 999996532  223333333334445567788999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++++
T Consensus       268 ~~Rp~~~~i~~~  279 (283)
T cd05090         268 SRRPRFKDIHTR  279 (283)
T ss_pred             ccCcCHHHHHHH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.58  E-value=2e-15  Score=119.50  Aligned_cols=90  Identities=26%  Similarity=0.408  Sum_probs=71.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||+..+..++.++|+||+|+++|+|++|..||...  .................+..++..+.+++.+||..+|
T Consensus       163 ~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  240 (255)
T cd08219         163 TPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN--SWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNP  240 (255)
T ss_pred             CccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC--CHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCc
Confidence            35699999999999999999999999999999999999642  2222222222333344566788999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.-
T Consensus       241 ~~Rp~~~~il~~  252 (255)
T cd08219         241 RSRPSATTILSR  252 (255)
T ss_pred             ccCCCHHHHhhc
Confidence            999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.58  E-value=4.8e-15  Score=118.12  Aligned_cols=89  Identities=22%  Similarity=0.430  Sum_probs=70.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||++.++.++.++|+||+||++|+|++ |..||....  ................+...+..+.+++.+||..+
T Consensus       176 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  253 (269)
T cd05044         176 PVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN--NQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQD  253 (269)
T ss_pred             CccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC--HHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCC
Confidence            357999999999999999999999999999998 999997432  22222222233344455677899999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       254 p~~Rp~~~~i~~  265 (269)
T cd05044         254 PSERPTFDRIQE  265 (269)
T ss_pred             cccCCCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.58  E-value=4.4e-15  Score=117.94  Aligned_cols=88  Identities=17%  Similarity=0.277  Sum_probs=69.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..++.++|+||+||++|+|++ |..||....  ..............+.+..++..+.+++.+||..+|
T Consensus       168 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  245 (261)
T cd05072         168 IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKA  245 (261)
T ss_pred             eecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            36999999999999999999999999999998 999997432  222222222233344445678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++..
T Consensus       246 ~~Rp~~~~i~~  256 (261)
T cd05072         246 EERPTFDYLQS  256 (261)
T ss_pred             ccCcCHHHHHH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=3.3e-15  Score=123.15  Aligned_cols=101  Identities=25%  Similarity=0.401  Sum_probs=72.1

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC---CCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---PEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li   72 (222)
                      |..|+|||++.     .+.|+.++||||+||++|+|++|+.||... ...............   +.....++..+++++
T Consensus       166 t~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li  244 (331)
T cd05597         166 TPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLI  244 (331)
T ss_pred             cccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC-CHHHHHHHHHcCCCcccCCCccCCCCHHHHHHH
Confidence            56899999876     356889999999999999999999999642 222222222111111   122245789999999


Q ss_pred             HHhcccCCCC--CCChhhhhcCcccccccccc
Q psy14555         73 LRCFEKDPDK--RATAGELLEDPFLADLTATR  102 (222)
Q Consensus        73 ~~~l~~~p~~--R~s~~~~l~h~~~~~~~~~~  102 (222)
                      .+||..++.+  |+++.+++.||||.+..+..
T Consensus       245 ~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~~  276 (331)
T cd05597         245 RRLICSPETRLGRNGLQDFKDHPFFEGIDWDN  276 (331)
T ss_pred             HHHccCcccccCCCCHHHHhcCCCCCCCCHHH
Confidence            9988654433  78999999999998765543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.58  E-value=4.1e-15  Score=129.03  Aligned_cols=98  Identities=20%  Similarity=0.242  Sum_probs=69.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCC-CCCCCCC-hHHHHHHhhh--ccCCCC-----------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKP-PFIELGS-PQAALYRVGF--HKMHPE-----------------   59 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~-Pf~~~~~-~~~~~~~~~~--~~~~~~-----------------   59 (222)
                      |..|+|||++.+..|+.++||||+||++|||++|.. |+..... ....+.....  ......                 
T Consensus       331 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~  410 (501)
T PHA03210        331 TVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEI  410 (501)
T ss_pred             CcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhc
Confidence            678999999999999999999999999999999764 4432111 1111111110  000000                 


Q ss_pred             --CC---------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         60 --IP---------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        60 --~~---------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                        .+         ..++.++.+++.+||..||.+||++.+++.||||...
T Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        411 DHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             ccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence              00         1245667888999999999999999999999999764

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.58  E-value=5.7e-15  Score=119.18  Aligned_cols=95  Identities=23%  Similarity=0.420  Sum_probs=67.5

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccC--------------------CC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKM--------------------HP   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~--------------------~~   58 (222)
                      |..|+|||...+ ..++.++|+||+||++|+|++|.+||.............. ....                    ..
T Consensus       166 ~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (291)
T cd07844         166 TLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPF  245 (291)
T ss_pred             ccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccc
Confidence            356999998765 5689999999999999999999999964332222111100 0000                    00


Q ss_pred             --CC-----Ccccc--HHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 --EI-----PAELS--DKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 --~~-----~~~~~--~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                        ..     ...++  ..+.+++.+||..+|.+||++.+++.||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         246 YPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence              00     01233  788899999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.58  E-value=5.1e-15  Score=118.88  Aligned_cols=94  Identities=23%  Similarity=0.447  Sum_probs=68.3

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh----------------ccCCCC----
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF----------------HKMHPE----   59 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~----------------~~~~~~----   59 (222)
                      |..|++||.+.+ ..++.++|+||+||++|+|++|.+||..... .........                ......    
T Consensus       163 ~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd07836         163 TLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN-EDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRY  241 (284)
T ss_pred             cccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCChhhHHHHhcCchhcccccCC
Confidence            457999997755 4578999999999999999999999975322 211111100                000000    


Q ss_pred             -------CCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         60 -------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        60 -------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                             .....+..+.+++.+||+.+|.+||++.+++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         242 PPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             ChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                   012347788999999999999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.57  E-value=3.4e-15  Score=121.68  Aligned_cols=95  Identities=25%  Similarity=0.404  Sum_probs=67.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHhh--h----------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ--------AALYRVG--F----------------   53 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~--------~~~~~~~--~----------------   53 (222)
                      |..|+|||++.+ ..++.++|+||+||++|+|++|.+||.......        .......  .                
T Consensus       178 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  257 (316)
T cd07842         178 TIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPE  257 (316)
T ss_pred             cccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhccc
Confidence            456999997765 468999999999999999999999996432211        0000000  0                


Q ss_pred             ------ccCCCCCC-----------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         54 ------HKMHPEIP-----------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        54 ------~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                            .......+           ...+..+.+++.+||..+|.+||++.+++.||||
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         258 YDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             chhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                  00000001           1456788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0577|consensus

Probab=99.57  E-value=2.1e-15  Score=127.61  Aligned_cols=96  Identities=29%  Similarity=0.544  Sum_probs=80.3

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |++|||||+++   .+.|+-+|||||+|+++.||.-.+||+..+ +....++.+.....+.-....+|..+.+|+..||+
T Consensus       185 TPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM-NAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLq  263 (948)
T KOG0577|consen  185 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQ  263 (948)
T ss_pred             CccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc-hHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHh
Confidence            89999999877   568999999999999999999999998765 34555555544333333346789999999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      +-|.+|||.++++.|+|+..
T Consensus       264 KipqeRptse~ll~H~fv~R  283 (948)
T KOG0577|consen  264 KIPQERPTSEELLKHRFVLR  283 (948)
T ss_pred             hCcccCCcHHHHhhcchhcc
Confidence            99999999999999999865

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.57  E-value=7.7e-16  Score=121.89  Aligned_cols=95  Identities=28%  Similarity=0.503  Sum_probs=70.6

Q ss_pred             CcceecCcccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH--HHHHhhhccCC--CCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSV-NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA--ALYRVGFHKMH--PEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~-~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~li~~~   75 (222)
                      |..|+|||.+. +..++.++|+||+|+++|+|++|..||........  ...........  .......+..+.+++.+|
T Consensus       161 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  240 (260)
T PF00069_consen  161 TPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKM  240 (260)
T ss_dssp             SGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHH
Confidence            56799999988 88899999999999999999999999974311111  11111111111  111112248999999999


Q ss_pred             cccCCCCCCChhhhhcCccc
Q psy14555         76 FEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~   95 (222)
                      |..+|.+||++.++++||||
T Consensus       241 l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  241 LSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             SSSSGGGSTTHHHHHTSGGG
T ss_pred             ccCChhHCcCHHHHhcCCCC
Confidence            99999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.57  E-value=5.6e-15  Score=117.11  Aligned_cols=88  Identities=23%  Similarity=0.373  Sum_probs=70.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||...+..++.++|+||+||++|++++ |.+||....  ................+..++..+++++.+||..+|
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  239 (257)
T cd05060         162 LKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRP  239 (257)
T ss_pred             ccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCCh
Confidence            46999999999999999999999999999998 999996432  223333323333445566788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       240 ~~Rp~~~~l~~  250 (257)
T cd05060         240 EDRPTFSELES  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.57  E-value=1.1e-14  Score=120.12  Aligned_cols=98  Identities=28%  Similarity=0.436  Sum_probs=71.2

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hc-----------------------c
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FH-----------------------K   55 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~-----------------------~   55 (222)
                      |..|++||.+.+ ..++.++|+||+||++|+|++|++||...... ....... ..                       .
T Consensus       175 ~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (337)
T cd07852         175 TRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL-NQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLP  253 (337)
T ss_pred             cccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcc
Confidence            457999997654 56889999999999999999999999643221 1111000 00                       0


Q ss_pred             -----CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         56 -----MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        56 -----~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                           .........+..+.+++.+||..+|.+||++.+++.|||++...
T Consensus       254 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~  302 (337)
T cd07852         254 SRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH  302 (337)
T ss_pred             cccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence                 00011123688899999999999999999999999999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.57  E-value=4.6e-15  Score=118.90  Aligned_cols=94  Identities=28%  Similarity=0.513  Sum_probs=68.7

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhc------------------cCCC--
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFH------------------KMHP--   58 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~------------------~~~~--   58 (222)
                      +..|+|||.+... .++.++|+||+||++|++++|.+||..... ....... ...                  ...+  
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
T cd07829         161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE-IDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKF  239 (282)
T ss_pred             CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHhCCCcHHHHHhhccccccccccccc
Confidence            3569999988776 889999999999999999999999964322 1111110 000                  0000  


Q ss_pred             ------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 ------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 ------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                            ......+..+.+++.+||..+|.+||++.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         240 PPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             CccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence                  0011347789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.57  E-value=5.8e-15  Score=116.71  Aligned_cols=90  Identities=22%  Similarity=0.409  Sum_probs=73.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||......++.++|+||+||++|+|++ |..||...  .................+..++.++.+++.+||..+
T Consensus       170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  247 (262)
T cd00192         170 PIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--SNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLD  247 (262)
T ss_pred             CccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCC
Confidence            457999999988899999999999999999999 69999754  333333333334455566778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       248 p~~Rps~~~l~~~  260 (262)
T cd00192         248 PEDRPTFSELVER  260 (262)
T ss_pred             cccCcCHHHHHHh
Confidence            9999999999865

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.57  E-value=6.1e-15  Score=118.90  Aligned_cols=101  Identities=31%  Similarity=0.479  Sum_probs=75.9

Q ss_pred             cceecCcccCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          2 NVIFLTQYSVNSS--YSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         2 ~~y~aPe~~~~~~--y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      ..|++||.+.+..  ++.++|+||+|+++|+|++|..||......  ...+... .....+..+..++..+.+++.+||+
T Consensus       170 ~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~  248 (288)
T cd05583         170 IEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRR-ILKSKPPFPKTMSAEARDFIQKLLE  248 (288)
T ss_pred             ccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHH-HHccCCCCCcccCHHHHHHHHHHhc
Confidence            5699999877665  788999999999999999999999532211  1122221 2223344566688999999999999


Q ss_pred             cCCCCCCCh---hhhhcCccccccccccC
Q psy14555         78 KDPDKRATA---GELLEDPFLADLTATRS  103 (222)
Q Consensus        78 ~~p~~R~s~---~~~l~h~~~~~~~~~~~  103 (222)
                      .+|++||++   .+++.||||+...|...
T Consensus       249 ~~p~~R~t~~~~~~~l~~~~~~~~~~~~~  277 (288)
T cd05583         249 KDPKKRLGANGADEIKNHPFFQGIDWDDL  277 (288)
T ss_pred             CCHhhccCcchHHHHhcCcccccCCHHHH
Confidence            999999985   56799999998766443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.57  E-value=5.3e-15  Score=122.57  Aligned_cols=97  Identities=24%  Similarity=0.349  Sum_probs=70.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-c-----------------------c
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-H-----------------------K   55 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~-----------------------~   55 (222)
                      |..|+|||...+ ..++.++|+||+||++|+|++|.+||..... ......... .                       .
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (345)
T cd07877         180 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESARNYIQSLT  258 (345)
T ss_pred             CCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhc
Confidence            457999998766 5689999999999999999999999964322 111111000 0                       0


Q ss_pred             CCC-----CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 MHP-----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 ~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..+     ......++.+.+|+.+||..+|.+|+++.+++.||||...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         259 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  306 (345)
T ss_pred             ccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence            000     0112357889999999999999999999999999999864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.57  E-value=1e-14  Score=117.07  Aligned_cols=94  Identities=28%  Similarity=0.466  Sum_probs=67.5

Q ss_pred             CcceecCcccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccC--------------------C-
Q psy14555          1 MNVIFLTQYSV-NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKM--------------------H-   57 (222)
Q Consensus         1 t~~y~aPe~~~-~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~--------------------~-   57 (222)
                      |..|+|||++. ...++.++|+||+|+++++|++|.+||....... ...... ....                    . 
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd07830         161 TRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ  239 (283)
T ss_pred             cccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence            45799999764 4568999999999999999999999996432211 111110 0000                    0 


Q ss_pred             ------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         58 ------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        58 ------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                            .......+..+.+++.+||..+|.+||++.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence                  00011236789999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.57  E-value=9.6e-15  Score=117.91  Aligned_cols=95  Identities=24%  Similarity=0.405  Sum_probs=67.9

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hcc---------------CCCC----
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHK---------------MHPE----   59 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~---------------~~~~----   59 (222)
                      |..|+|||.+.+ ..++.++|+||+||++|+|++|..||.........+.... ..+               ....    
T Consensus       166 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (291)
T cd07870         166 TLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLP  245 (291)
T ss_pred             cccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccc
Confidence            457999998765 4589999999999999999999999964332212111110 000               0000    


Q ss_pred             -CC---------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         60 -IP---------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        60 -~~---------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                       .+         ...+..+.+++.+|+..+|.+|||+.+++.||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         246 CKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             cCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence             00         0125678899999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.56  E-value=6.5e-15  Score=116.76  Aligned_cols=89  Identities=18%  Similarity=0.320  Sum_probs=72.0

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..|+.++|+||+|+++|++++ |.+||...  .................+...+..+.+++.+||..+|
T Consensus       165 ~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05059         165 VKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF--SNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKP  242 (256)
T ss_pred             ccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC--CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCCh
Confidence            35999999999999999999999999999998 89999643  2233333333444455566789999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++..
T Consensus       243 ~~Rpt~~~~l~~  254 (256)
T cd05059         243 EDRPAFKKLLSQ  254 (256)
T ss_pred             hhCcCHHHHHHH
Confidence            999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.56  E-value=7.5e-15  Score=123.06  Aligned_cols=90  Identities=19%  Similarity=0.361  Sum_probs=71.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..|+.++|+||+||++|+|++ |.+||..... ................|...+.++.+|+.+||..+|
T Consensus       280 ~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  358 (375)
T cd05104         280 VKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-DSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADP  358 (375)
T ss_pred             cceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-hHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCCh
Confidence            45999999999999999999999999999998 8999975322 223333333333344455678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++..
T Consensus       359 ~~RPs~~eil~~  370 (375)
T cd05104         359 LKRPTFKQIVQL  370 (375)
T ss_pred             hHCcCHHHHHHH
Confidence            999999999764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.56  E-value=8.8e-15  Score=116.16  Aligned_cols=89  Identities=20%  Similarity=0.391  Sum_probs=69.2

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||+..+..++.++||||+||++|||++ |.+||...  ..............+..+...+..+.+++.+||..+|
T Consensus       166 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  243 (262)
T cd05058         166 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--DSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKP  243 (262)
T ss_pred             ccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCCh
Confidence            46999999989999999999999999999999 56777532  2222222233333444455678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++..
T Consensus       244 ~~Rp~~~~il~~  255 (262)
T cd05058         244 EMRPTFSELVSR  255 (262)
T ss_pred             hhCCCHHHHHHH
Confidence            999999998763

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.56  E-value=6.4e-15  Score=117.92  Aligned_cols=89  Identities=21%  Similarity=0.435  Sum_probs=71.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+..+.++.++|+||+||++|++++ |.+||...  .................|...+..+.+++.+||..+
T Consensus       184 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  261 (277)
T cd05032         184 PVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL--SNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYN  261 (277)
T ss_pred             cccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC--CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            356999999988999999999999999999998 99999643  233333333344445556677999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       262 p~~Rpt~~~l~~  273 (277)
T cd05032         262 PKMRPTFLEIVS  273 (277)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.56  E-value=8.4e-15  Score=116.92  Aligned_cols=89  Identities=20%  Similarity=0.390  Sum_probs=71.2

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||+..+..++.++|+||+||++|+|++ |.+||...  .................+..++..+.+++.+||..+|
T Consensus       178 ~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  255 (272)
T cd05075         178 VKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV--ENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNP  255 (272)
T ss_pred             cccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            46999999999999999999999999999999 89999753  2333333333333334456678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       256 ~~Rps~~~l~~~  267 (272)
T cd05075         256 KDRPSFETLRCE  267 (272)
T ss_pred             ccCcCHHHHHHH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.56  E-value=8.7e-15  Score=116.21  Aligned_cols=87  Identities=20%  Similarity=0.419  Sum_probs=70.0

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      .|+|||...+..++.++|+||+|+++|+|++ |.+||....  ..............+.+...+..+.+++.+||..+|.
T Consensus       168 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  245 (260)
T cd05070         168 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPE  245 (260)
T ss_pred             cccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcc
Confidence            5999999988899999999999999999999 999997432  2223333333344455667789999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||++.++..
T Consensus       246 ~Rpt~~~l~~  255 (260)
T cd05070         246 ERPTFEYLQS  255 (260)
T ss_pred             cCcCHHHHHH
Confidence            9999998763

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.56  E-value=2.4e-15  Score=123.95  Aligned_cols=101  Identities=21%  Similarity=0.355  Sum_probs=73.5

Q ss_pred             CcceecCcccCC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC---ccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVN-----SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP---AELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~-----~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li   72 (222)
                      |+.|+|||++.+     +.|+.++|+||+||++|+|++|+.||... ..................|   ..++..+++++
T Consensus       166 t~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li  244 (331)
T cd05624         166 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHEERFQFPSHITDVSEEAKDLI  244 (331)
T ss_pred             CcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC-CHHHHHHHHHcCCCcccCCCccccCCHHHHHHH
Confidence            568999998765     56889999999999999999999999743 2222222222222222222   34689999999


Q ss_pred             HHhcccCCCC--CCChhhhhcCcccccccccc
Q psy14555         73 LRCFEKDPDK--RATAGELLEDPFLADLTATR  102 (222)
Q Consensus        73 ~~~l~~~p~~--R~s~~~~l~h~~~~~~~~~~  102 (222)
                      .+||...+.+  |+++++++.|+||....|..
T Consensus       245 ~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~~  276 (331)
T cd05624         245 QRLICSRERRLGQNGIEDFKKHAFFEGIDWEN  276 (331)
T ss_pred             HHHccCchhhcCCCCHHHHhcCCCcCCCCHHH
Confidence            9999876544  46899999999998765543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.56  E-value=1e-14  Score=115.23  Aligned_cols=87  Identities=21%  Similarity=0.357  Sum_probs=69.4

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      .|+|||.+.++.++.++|+||+||++|++++ |.+||....  ................+...+..+.+++.+||..+|.
T Consensus       161 ~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  238 (252)
T cd05084         161 KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS--NQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPG  238 (252)
T ss_pred             eecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC--HHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChh
Confidence            5999999999999999999999999999998 999986432  2222222223334455667789999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||++.+++.
T Consensus       239 ~Rps~~~~~~  248 (252)
T cd05084         239 QRPSFSTVHQ  248 (252)
T ss_pred             hCcCHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.56  E-value=7.1e-15  Score=120.25  Aligned_cols=89  Identities=21%  Similarity=0.376  Sum_probs=72.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..++.++||||+||++|||++ |..||.+.  ....+..........+.+...+.++.+++.+||..+|
T Consensus       175 ~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  252 (316)
T cd05108         175 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA  252 (316)
T ss_pred             eeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            46999999999999999999999999999997 99999643  3333333333344444556678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       253 ~~Rps~~~l~~~  264 (316)
T cd05108         253 DSRPKFRELIIE  264 (316)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.56  E-value=7.7e-15  Score=116.57  Aligned_cols=88  Identities=17%  Similarity=0.292  Sum_probs=71.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..++.++|+||+||++|++++ |.+||....  ................+...+.++.+++.+||..+|
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~  239 (257)
T cd05115         162 LKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--GPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKW  239 (257)
T ss_pred             cccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            46999999988899999999999999999996 999997432  233333333344455667789999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++.+
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05115         240 EDRPNFAKVEE  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.56  E-value=4.8e-15  Score=119.69  Aligned_cols=89  Identities=24%  Similarity=0.472  Sum_probs=72.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..++.++|+||+||++|++++ |..||...  .................+...+..+.+|+.+||..+|
T Consensus       198 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  275 (293)
T cd05053         198 VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI--PVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVP  275 (293)
T ss_pred             ccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC--CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCc
Confidence            46999999999999999999999999999998 99999743  3333333333444445566778999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       276 ~~Rps~~eil~~  287 (293)
T cd05053         276 SQRPTFKQLVED  287 (293)
T ss_pred             ccCcCHHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.55  E-value=1.2e-14  Score=117.83  Aligned_cols=93  Identities=29%  Similarity=0.389  Sum_probs=68.0

Q ss_pred             cceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCCC--------------------
Q psy14555          2 NVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMHP--------------------   58 (222)
Q Consensus         2 ~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~~--------------------   58 (222)
                      ..|++||.+.+ ..++.++|+||+||++|+|++|++||.... ..........  ....+                    
T Consensus       181 ~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (302)
T cd07864         181 LWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQ  259 (302)
T ss_pred             cCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCChhhcccccccccccccccccc
Confidence            46999997654 457899999999999999999999996432 2221111100  00000                    


Q ss_pred             ------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 ------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 ------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                            .....++..+.+++.+||..+|.+||++.+++.||||
T Consensus       260 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         260 YRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             cccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                  0112357899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.55  E-value=9.9e-15  Score=118.88  Aligned_cols=89  Identities=22%  Similarity=0.441  Sum_probs=72.4

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..++.++|+||+||++|+|++ |.+||..  ..................+...+.++.+++.+||..+|
T Consensus       206 ~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  283 (307)
T cd05098         206 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP  283 (307)
T ss_pred             cceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc--CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCh
Confidence            46999999999999999999999999999998 8899864  33344433333344445566788999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       284 ~~Rps~~evl~~  295 (307)
T cd05098         284 SQRPTFKQLVED  295 (307)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999774

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.55  E-value=1.1e-14  Score=115.67  Aligned_cols=88  Identities=18%  Similarity=0.373  Sum_probs=70.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||...+..++.++|+||+||++|+|++ |..||...  .................+...+..+.+++.+||..+|
T Consensus       167 ~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05069         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM--VNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDP  244 (260)
T ss_pred             hhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCc
Confidence            46999999999999999999999999999999 99999753  2233333323333444566788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       245 ~~Rp~~~~i~~  255 (260)
T cd05069         245 DERPTFEYIQS  255 (260)
T ss_pred             ccCcCHHHHHH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.55  E-value=1.1e-14  Score=117.52  Aligned_cols=101  Identities=31%  Similarity=0.458  Sum_probs=76.5

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhhhccCCCCCCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVGFHKMHPEIPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l   76 (222)
                      |..|++||.+..  ..++.++|+||+|+++|+|++|..||...+..  ...+... .....++.+..++..+.+++.+||
T Consensus       169 ~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~l  247 (290)
T cd05613         169 TIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR-ILKSEPPYPQEMSALAKDIIQRLL  247 (290)
T ss_pred             CcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH-hhccCCCCCccCCHHHHHHHHHHh
Confidence            457999998875  35788999999999999999999999532211  1122221 222233456668899999999999


Q ss_pred             ccCCCCCC-----ChhhhhcCcccccccccc
Q psy14555         77 EKDPDKRA-----TAGELLEDPFLADLTATR  102 (222)
Q Consensus        77 ~~~p~~R~-----s~~~~l~h~~~~~~~~~~  102 (222)
                      ..+|.+|+     ++.+++.||||....|..
T Consensus       248 ~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~  278 (290)
T cd05613         248 MKDPKKRLGCGPSDADEIKKHPFFQKINWDD  278 (290)
T ss_pred             cCCHHHhcCCCCCCHHHHHcCcccccCCHHH
Confidence            99999997     889999999998876544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.55  E-value=9e-15  Score=116.90  Aligned_cols=88  Identities=22%  Similarity=0.412  Sum_probs=69.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++....++.++|+||+||++|+|++ |..||...  .................+...+..+.+++.+||..+|
T Consensus       175 ~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  252 (270)
T cd05047         175 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKP  252 (270)
T ss_pred             cccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc--CHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccCh
Confidence            45999999999999999999999999999997 99999642  2233333323333334455678899999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       253 ~~Rps~~~il~  263 (270)
T cd05047         253 YERPSFAQILV  263 (270)
T ss_pred             hhCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.55  E-value=1.4e-14  Score=117.92  Aligned_cols=89  Identities=19%  Similarity=0.395  Sum_probs=70.4

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..++.++|+||+||++|+|++ |.+||..... ................+...+..+.+++.+||..+|
T Consensus       207 ~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  285 (302)
T cd05055         207 VKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-DSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADP  285 (302)
T ss_pred             cccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-hHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            46999999999999999999999999999998 9999975322 223323222333334455678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       286 ~~Rpt~~ell~  296 (302)
T cd05055         286 LKRPTFKQIVQ  296 (302)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.55  E-value=1.1e-14  Score=115.65  Aligned_cols=88  Identities=16%  Similarity=0.316  Sum_probs=70.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||++....++.++|+||+|+++|++++ |++||....  ..............+.+...+..+.+++.+||..+|
T Consensus       167 ~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05067         167 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKP  244 (260)
T ss_pred             ccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            46999999999999999999999999999998 999997532  222222223333445566678899999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++++++.
T Consensus       245 ~~Rp~~~~l~~  255 (260)
T cd05067         245 EERPTFEYLRS  255 (260)
T ss_pred             hhCCCHHHHHH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.55  E-value=1.1e-14  Score=117.50  Aligned_cols=88  Identities=24%  Similarity=0.489  Sum_probs=72.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||++.+..++.++|+||+|+++|+|++ |..||...  ....+............+...+..+.+++.+||..+|
T Consensus       193 ~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P  270 (290)
T cd05045         193 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--APERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEP  270 (290)
T ss_pred             ccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCc
Confidence            46999999999999999999999999999998 99999643  3344444333444445567788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       271 ~~Rp~~~~i~~  281 (290)
T cd05045         271 DKRPTFADISK  281 (290)
T ss_pred             ccCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.55  E-value=1.2e-14  Score=115.85  Aligned_cols=89  Identities=17%  Similarity=0.384  Sum_probs=71.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||.+.+..++.++|+||+|+++|+|++ |..||...  ...............+.+...+..+.+++.+||..+|
T Consensus       172 ~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  249 (266)
T cd05033         172 IRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM--SNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDR  249 (266)
T ss_pred             ccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            46999999999999999999999999999998 99999643  2233333333333444556778999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++++
T Consensus       250 ~~Rp~~~ei~~~  261 (266)
T cd05033         250 NERPTFSQIVST  261 (266)
T ss_pred             ccCcCHHHHHHH
Confidence            999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.54  E-value=1.3e-14  Score=114.84  Aligned_cols=89  Identities=20%  Similarity=0.340  Sum_probs=69.7

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.++.++.++|+||+|+++|+|++ |..||...  .................+...+..+.+|+.+||..+|
T Consensus       165 ~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p  242 (256)
T cd05112         165 VKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR--SNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERP  242 (256)
T ss_pred             hhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC--CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccCh
Confidence            46999999998999999999999999999998 99999642  2233322222222333455578999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++++
T Consensus       243 ~~Rp~~~~~l~~  254 (256)
T cd05112         243 EDRPSFSLLLHQ  254 (256)
T ss_pred             hhCCCHHHHHHh
Confidence            999999998763

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.54  E-value=1.3e-14  Score=116.92  Aligned_cols=88  Identities=14%  Similarity=0.274  Sum_probs=69.2

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..|+.++|+||+||++|+|++ |..||....  ................+...+..+.+|+.+||..+|
T Consensus       196 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  273 (288)
T cd05050         196 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA--HEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLP  273 (288)
T ss_pred             hhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCc
Confidence            35999999999999999999999999999997 888986432  233333322333334456678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++++
T Consensus       274 ~~Rpt~~el~~  284 (288)
T cd05050         274 SDRPSFASINR  284 (288)
T ss_pred             ccCCCHHHHHH
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.54  E-value=1.8e-14  Score=114.71  Aligned_cols=88  Identities=18%  Similarity=0.389  Sum_probs=69.7

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||+..+..++.++|+||+||++|++++ |.+||...  .................+...+..+.+++.+||..+|
T Consensus       167 ~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  244 (262)
T cd05071         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP  244 (262)
T ss_pred             ceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--ChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCc
Confidence            46999999999999999999999999999999 88999643  2223333323333334455678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       245 ~~Rp~~~~~~~  255 (262)
T cd05071         245 EERPTFEYLQA  255 (262)
T ss_pred             ccCCCHHHHHH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.54  E-value=1.2e-14  Score=116.60  Aligned_cols=88  Identities=24%  Similarity=0.466  Sum_probs=70.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||+..+..++.++||||+||++|++++ |.+||... .. ..+............+..++..+.+++.+||..+|
T Consensus       183 ~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  260 (280)
T cd05043         183 VKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI-DP-FEMAAYLKDGYRLAQPINCPDELFAVMACCWALDP  260 (280)
T ss_pred             hhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC-CH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCh
Confidence            35999999999999999999999999999998 99999643 22 22323223333444455678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      ++||++.+++.
T Consensus       261 ~~Rps~~~~~~  271 (280)
T cd05043         261 EERPSFSQLVQ  271 (280)
T ss_pred             hhCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.54  E-value=6.6e-14  Score=122.84  Aligned_cols=95  Identities=15%  Similarity=0.082  Sum_probs=61.7

Q ss_pred             CcceecCcccCCC----------------------CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccC-
Q psy14555          1 MNVIFLTQYSVNS----------------------SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKM-   56 (222)
Q Consensus         1 t~~y~aPe~~~~~----------------------~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~-   56 (222)
                      |+.|||||.....                      .|+.++||||+||++|||+++..|+.   .....+.... .... 
T Consensus       320 t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~---~~~~~~~~~l~~~~~~  396 (566)
T PLN03225        320 DPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD---SNLIQFNRQLKRNDYD  396 (566)
T ss_pred             CCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc---hHHHHHHHHHHhcCCc
Confidence            4679999954322                      34556799999999999998766542   1111111110 0000 


Q ss_pred             --------CCCC----------CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         57 --------HPEI----------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        57 --------~~~~----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                              ....          .........+|+.+||..||.+||++.++++||||.+.
T Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~  456 (566)
T PLN03225        397 LVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDRE  456 (566)
T ss_pred             HHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCC
Confidence                    0000          01123345689999999999999999999999999764

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.54  E-value=1.2e-14  Score=115.33  Aligned_cols=89  Identities=19%  Similarity=0.345  Sum_probs=70.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||...+..|+.++|+||+||++|+|++ |..||.....  ...............+...+..+.+++.+||..+|
T Consensus       165 ~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05113         165 VRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--SETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKA  242 (256)
T ss_pred             hhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            46999999988899999999999999999998 9999964332  22222223333344455678999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       243 ~~Rp~~~~ll~~  254 (256)
T cd05113         243 EERPTFQQLLSS  254 (256)
T ss_pred             ccCCCHHHHHHh
Confidence            999999999764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.54  E-value=1.8e-14  Score=114.54  Aligned_cols=91  Identities=27%  Similarity=0.465  Sum_probs=69.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCc-cccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA-ELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||++.+..++.++|+||+||++|+|++|..||...................++.+. ..+....+++.+||..+
T Consensus       169 ~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~  248 (267)
T cd08224         169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPD  248 (267)
T ss_pred             CccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999999999543222222222222223333343 67889999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       249 p~~Rp~~~~il~  260 (267)
T cd08224         249 PEKRPDISYVLQ  260 (267)
T ss_pred             cccCCCHHHHHH
Confidence            999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.54  E-value=2e-14  Score=118.39  Aligned_cols=97  Identities=26%  Similarity=0.420  Sum_probs=70.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh------------------------hhcc
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV------------------------GFHK   55 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~------------------------~~~~   55 (222)
                      |..|++||.+.+ ..++.++|+||+||++|+|++|.+||..... .......                        ....
T Consensus       168 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (328)
T cd07856         168 TRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLP  246 (328)
T ss_pred             cccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc
Confidence            356999998765 5789999999999999999999999964321 1110000                        0000


Q ss_pred             CCCCCC-----ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 MHPEIP-----AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 ~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .....+     ...+..+.+++.+||..+|.+||++.+++.|+||...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         247 KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence            001111     2467899999999999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.54  E-value=2.2e-14  Score=114.00  Aligned_cols=88  Identities=22%  Similarity=0.395  Sum_probs=70.0

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||+..+..++.++|+||+|+++|+|++ |+.||.+.  .................+...+..+.+++.+||..+|
T Consensus       168 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  245 (261)
T cd05068         168 IKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM--TNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDP  245 (261)
T ss_pred             eeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCc
Confidence            36999999999999999999999999999999 99999753  2233322223333344456678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       246 ~~Rp~~~~l~~  256 (261)
T cd05068         246 DDRPTFETLQW  256 (261)
T ss_pred             ccCCCHHHHHH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.54  E-value=1.9e-14  Score=114.56  Aligned_cols=92  Identities=25%  Similarity=0.382  Sum_probs=70.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      +..|+|||...+..++.++|+||+|+++|+|++|..||................ ..++..+...+..+.+++.+||..+
T Consensus       169 ~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  248 (267)
T cd08228         169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPD  248 (267)
T ss_pred             CccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCC
Confidence            357999999998999999999999999999999999986433222233222222 2222223457889999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.++++.
T Consensus       249 p~~Rp~~~~vl~~  261 (267)
T cd08228         249 PDQRPDIGYVHQI  261 (267)
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.54  E-value=1.4e-14  Score=114.79  Aligned_cols=88  Identities=17%  Similarity=0.299  Sum_probs=70.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..++.++|+||+||++|+|++ |++||...  .................+..++..+.+++.+||..+|
T Consensus       163 ~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  240 (256)
T cd05082         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDA  240 (256)
T ss_pred             eeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCCh
Confidence            36999999999999999999999999999997 99999642  2233322223333445566788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       241 ~~Rpt~~~l~~  251 (256)
T cd05082         241 ATRPSFLQLRE  251 (256)
T ss_pred             hhCcCHHHHHH
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.54  E-value=1.8e-14  Score=114.90  Aligned_cols=87  Identities=15%  Similarity=0.400  Sum_probs=69.4

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      .|++||++.++.++.++|+||+||++|++++ |..||....  ..............+.+...+..+.+++.+||..+|.
T Consensus       175 ~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~  252 (268)
T cd05063         175 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--NHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRA  252 (268)
T ss_pred             eecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence            5999999999999999999999999999997 999996432  2333333233334444556788999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||++.++++
T Consensus       253 ~Rp~~~~i~~  262 (268)
T cd05063         253 RRPRFVDIVN  262 (268)
T ss_pred             cCcCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.54  E-value=1.7e-14  Score=115.82  Aligned_cols=94  Identities=21%  Similarity=0.387  Sum_probs=67.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC--------------------C
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH--------------------P   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~--------------------~   58 (222)
                      |..|++||.+.+ ..++.++|+||+|+++|+|++|..||..... ........ .....                    .
T Consensus       164 ~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (287)
T cd07840         164 TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKK  242 (287)
T ss_pred             ccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchhhccccccchhhhhccccc
Confidence            456999996654 4689999999999999999999999965332 21111110 00000                    0


Q ss_pred             C--------CCccccHHHHHHHHHhcccCCCCCCChhhhhcCccc
Q psy14555         59 E--------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL   95 (222)
Q Consensus        59 ~--------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~   95 (222)
                      .        .....+..+.+++.+||..+|.+||++.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         243 PYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            0        001137889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.54  E-value=1.5e-14  Score=118.21  Aligned_cols=89  Identities=21%  Similarity=0.430  Sum_probs=71.0

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.++.|+.++|+||+||++|++++ |..||...  .................+..++..+.+++.+||..+|
T Consensus       200 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  277 (314)
T cd05099         200 VKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI--PVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVP  277 (314)
T ss_pred             ccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            46999999999999999999999999999999 89999643  3333333333333344566778899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++..
T Consensus       278 ~~Rps~~~ll~~  289 (314)
T cd05099         278 TQRPTFKQLVEA  289 (314)
T ss_pred             ccCcCHHHHHHH
Confidence            999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.54  E-value=2.4e-14  Score=111.57  Aligned_cols=94  Identities=34%  Similarity=0.541  Sum_probs=73.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCcc--ccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE--LSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~l~~   78 (222)
                      +..|++||......++.++|+||+|++++++++|..||... ..................+..  ++..+.+++.+||..
T Consensus       149 ~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  227 (244)
T smart00220      149 TPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD-DQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVK  227 (244)
T ss_pred             CcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccC
Confidence            35799999998889999999999999999999999999642 222333332222222222222  788999999999999


Q ss_pred             CCCCCCChhhhhcCccc
Q psy14555         79 DPDKRATAGELLEDPFL   95 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~   95 (222)
                      +|.+||++.+++.||||
T Consensus       228 ~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      228 DPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CchhccCHHHHhhCCCC
Confidence            99999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.54  E-value=2.1e-14  Score=115.44  Aligned_cols=88  Identities=20%  Similarity=0.306  Sum_probs=69.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||++.++.|+.++|+||+||++||+++ |..||.+.  .................+...+..+.+++.+||..+|
T Consensus       175 ~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p  252 (279)
T cd05111         175 IKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGM--RPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDE  252 (279)
T ss_pred             ccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            46999999999999999999999999999998 99999643  2232222223333344455667889999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       253 ~~Rps~~el~~  263 (279)
T cd05111         253 NVRPTFKELAN  263 (279)
T ss_pred             ccCcCHHHHHH
Confidence            99999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.54  E-value=2.1e-14  Score=113.19  Aligned_cols=88  Identities=19%  Similarity=0.314  Sum_probs=70.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.++.++.++|+||+|+++|++++ |..||.....  ...............+..++..+.+++.+||..+|
T Consensus       158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  235 (250)
T cd05085         158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN--QQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKP  235 (250)
T ss_pred             ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCc
Confidence            35999999999999999999999999999998 9999975422  22222223333444556678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       236 ~~Rp~~~~l~~  246 (250)
T cd05085         236 ENRPKFSELQK  246 (250)
T ss_pred             ccCCCHHHHHH
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.54  E-value=8.6e-15  Score=119.11  Aligned_cols=89  Identities=21%  Similarity=0.405  Sum_probs=70.7

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..++.++|+||+||++|+|++ |.+||....  ................+...+..+.+++.+||..+|
T Consensus       187 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  264 (303)
T cd05088         187 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKP  264 (303)
T ss_pred             ccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC--hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence            35999999988899999999999999999998 999996432  233333323333344455678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       265 ~~Rp~~~~il~~  276 (303)
T cd05088         265 YERPSFAQILVS  276 (303)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.53  E-value=2.1e-14  Score=118.86  Aligned_cols=97  Identities=25%  Similarity=0.409  Sum_probs=71.3

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-cc---------------------CC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HK---------------------MH   57 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~---------------------~~   57 (222)
                      |..|++||.+.+ ..++.++|+||+||++|++++|.+||..... ......... ..                     .+
T Consensus       178 ~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (343)
T cd07880         178 TRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH-LDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLP  256 (343)
T ss_pred             CCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhcc
Confidence            467999998765 4588999999999999999999999964321 111111000 00                     00


Q ss_pred             -------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         58 -------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        58 -------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                             ......++..+.+++.+||..+|.+||++.+++.||||+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         257 RFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             ccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence                   01123567889999999999999999999999999999865

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.53  E-value=1.9e-14  Score=114.20  Aligned_cols=88  Identities=22%  Similarity=0.429  Sum_probs=71.0

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||....+.++.++|+||+|+++|+|++ |..||...  ...............+.+...+..+.+++.+||..+|
T Consensus       168 ~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  245 (261)
T cd05148         168 YKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM--NNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEP  245 (261)
T ss_pred             eEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC--CHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCc
Confidence            46999999999999999999999999999998 89999643  2233333333344445566788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       246 ~~Rpt~~~l~~  256 (261)
T cd05148         246 EDRPSFKALRE  256 (261)
T ss_pred             hhCcCHHHHHH
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.53  E-value=2.5e-14  Score=113.28  Aligned_cols=89  Identities=24%  Similarity=0.408  Sum_probs=70.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||++....++.++|+||+||++|+|++ |..||.... .................+...+..+.+++.+||..+|
T Consensus       164 ~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  242 (257)
T cd05040         164 FAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS-GSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNP  242 (257)
T ss_pred             ceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCc
Confidence            47999999999999999999999999999998 999996432 2222222222233334455678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       243 ~~Rps~~~~~~  253 (257)
T cd05040         243 ADRPTFAALRE  253 (257)
T ss_pred             ccCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.53  E-value=2.4e-14  Score=116.35  Aligned_cols=89  Identities=24%  Similarity=0.455  Sum_probs=72.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..|+.++|+||+|+++|++++ |..||...  +...+............+...+..+.+|+.+||..+|
T Consensus       203 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  280 (304)
T cd05101         203 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIP  280 (304)
T ss_pred             ceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCh
Confidence            46999999999999999999999999999998 88898642  3344433333334444566788999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++..
T Consensus       281 ~~Rps~~e~l~~  292 (304)
T cd05101         281 SHRPTFKQLVED  292 (304)
T ss_pred             hhCCCHHHHHHH
Confidence            999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.53  E-value=2e-14  Score=115.32  Aligned_cols=88  Identities=19%  Similarity=0.345  Sum_probs=70.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||...+..++.++||||+||++|||++ |.+||...  .................+...+..+.+++.+||..+|
T Consensus       175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  252 (279)
T cd05109         175 IKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI--PAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDS  252 (279)
T ss_pred             hhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCCh
Confidence            46999999999999999999999999999998 99999642  2222222223333444456678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      ..||++.+++.
T Consensus       253 ~~Rp~~~~l~~  263 (279)
T cd05109         253 ECRPRFRELVD  263 (279)
T ss_pred             hhCcCHHHHHH
Confidence            99999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.53  E-value=2.2e-14  Score=113.18  Aligned_cols=87  Identities=17%  Similarity=0.345  Sum_probs=69.0

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      .|++||.+.++.++.++|+||+||++|+|++ |..||.....  ...............+...+..+.+++.+||..+|.
T Consensus       160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  237 (251)
T cd05041         160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPE  237 (251)
T ss_pred             ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--HHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChh
Confidence            5999999988999999999999999999998 8999964322  222222222233344567789999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||++.+++.
T Consensus       238 ~Rp~~~ell~  247 (251)
T cd05041         238 NRPSFSEIYN  247 (251)
T ss_pred             hCcCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.52  E-value=3e-14  Score=113.40  Aligned_cols=91  Identities=24%  Similarity=0.381  Sum_probs=68.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-CCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      +..|+|||+..+..++.++|+||+|+++|+|++|..||................. ..+..+...+..+.+++.+||..+
T Consensus       169 ~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  248 (267)
T cd08229         169 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPD  248 (267)
T ss_pred             CcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCC
Confidence            3579999999999999999999999999999999999964332222222222222 222223457889999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       249 p~~Rpt~~~i~~  260 (267)
T cd08229         249 PEKRPDITYVYD  260 (267)
T ss_pred             cccCCCHHHHHH
Confidence            999999997754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.52  E-value=2.5e-14  Score=117.96  Aligned_cols=89  Identities=24%  Similarity=0.457  Sum_probs=72.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++.+..|+.++|+||+||++|+|++ |..||...  .................+...+..+.+++.+||..+|
T Consensus       200 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  277 (334)
T cd05100         200 VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI--PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVP  277 (334)
T ss_pred             ceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCh
Confidence            46999999999999999999999999999998 88999743  3333333333334445566778899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       278 ~~Rps~~ell~~  289 (334)
T cd05100         278 SQRPTFKQLVED  289 (334)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG2345|consensus

Probab=99.52  E-value=5.7e-15  Score=112.99  Aligned_cols=92  Identities=25%  Similarity=0.366  Sum_probs=64.1

Q ss_pred             CcceecCcccCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCChH-HHHHHhhhccCCCCCCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVNS---SYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-AALYRVGFHKMHPEIPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~~---~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l   76 (222)
                      |.+|-|||.+.-.   -.+.++||||+||++|+|+.|..||.-..... .....+.......+.....|+.+.++++.||
T Consensus       201 t~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~ml  280 (302)
T KOG2345|consen  201 TIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSML  280 (302)
T ss_pred             CCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHh
Confidence            7899999955444   45789999999999999999999994110000 0000000111111122337999999999999


Q ss_pred             ccCCCCCCChhhhhcC
Q psy14555         77 EKDPDKRATAGELLED   92 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h   92 (222)
                      +.||.+||++.+++.+
T Consensus       281 qvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  281 QVDPNQRPTIPELLSK  296 (302)
T ss_pred             cCCcccCCCHHHHHHH
Confidence            9999999999998764

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.52  E-value=3.4e-14  Score=113.43  Aligned_cols=89  Identities=17%  Similarity=0.299  Sum_probs=70.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+....++.++|+||+||++|++++ |..||.....  ...............+...+..+.+++.+||..+|
T Consensus       172 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  249 (270)
T cd05056         172 IKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP  249 (270)
T ss_pred             ccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence            36999999999999999999999999999986 9999975322  22222223333444566788999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++..
T Consensus       250 ~~Rpt~~~~~~~  261 (270)
T cd05056         250 SKRPRFTELKAQ  261 (270)
T ss_pred             hhCcCHHHHHHH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.52  E-value=3e-14  Score=113.02  Aligned_cols=88  Identities=19%  Similarity=0.398  Sum_probs=70.5

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||.+.+..++.++|+||+||++|++++ |+.||...  .................+...+..+.+++.+||..+|
T Consensus       168 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  245 (261)
T cd05034         168 IKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM--TNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDP  245 (261)
T ss_pred             ccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCc
Confidence            46999999999999999999999999999998 99999643  2233333333344444556678899999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||+++++..
T Consensus       246 ~~Rp~~~~l~~  256 (261)
T cd05034         246 EERPTFEYLQS  256 (261)
T ss_pred             ccCCCHHHHHH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.52  E-value=3e-14  Score=120.37  Aligned_cols=89  Identities=17%  Similarity=0.376  Sum_probs=71.2

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..|+.++||||+||++|+|++ |..||.... .................+..++..+.+++.+||..+|
T Consensus       303 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  381 (400)
T cd05105         303 VKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI-VDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEP  381 (400)
T ss_pred             cceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc-hhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCH
Confidence            46999999999999999999999999999997 999996432 2223333333344445566788999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++.+
T Consensus       382 ~~RPt~~~l~~  392 (400)
T cd05105         382 EKRPSFLHLSD  392 (400)
T ss_pred             hHCcCHHHHHH
Confidence            99999988765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.51  E-value=5e-15  Score=117.85  Aligned_cols=88  Identities=23%  Similarity=0.425  Sum_probs=67.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+....++.++||||||+++||+++ |..||...  ....+............+..++..+.+++..||..+|
T Consensus       169 ~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p  246 (259)
T PF07714_consen  169 LRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDP  246 (259)
T ss_dssp             GGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSG
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccceeccchhHHHHHHHHHHcCCCh
Confidence            46899999999999999999999999999999 78999754  3333333334444455566789999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.++++
T Consensus       247 ~~RPs~~~i~~  257 (259)
T PF07714_consen  247 EKRPSFQEILQ  257 (259)
T ss_dssp             GGS--HHHHHH
T ss_pred             hhCcCHHHHHh
Confidence            99999999864

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.51  E-value=5.1e-14  Score=111.47  Aligned_cols=88  Identities=23%  Similarity=0.378  Sum_probs=70.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||++..+.++.++|+||+|+++|++++ |..||...  .................+...+..+.+++.+||..+|
T Consensus       163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  240 (256)
T cd05039         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDP  240 (256)
T ss_pred             ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccCh
Confidence            46999999998999999999999999999997 99999643  2333333223333444556678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       241 ~~Rp~~~~l~~  251 (256)
T cd05039         241 AKRPTFKQLRE  251 (256)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.51  E-value=4.8e-14  Score=112.44  Aligned_cols=91  Identities=20%  Similarity=0.353  Sum_probs=68.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|++||.+.++.++.++|+||+|+++|+|++|.+||... ...............+......+..+.+++.+||..+|
T Consensus       176 ~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  254 (269)
T cd08528         176 TILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST-NMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDA  254 (269)
T ss_pred             cccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc-CHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCC
Confidence            45799999999999999999999999999999999999642 22222222211111221223568899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.++..+
T Consensus       255 ~~Rp~~~e~~~~  266 (269)
T cd08528         255 EARPDIIQVSAM  266 (269)
T ss_pred             ccCCCHHHHHHH
Confidence            999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.51  E-value=2.7e-14  Score=113.34  Aligned_cols=88  Identities=25%  Similarity=0.396  Sum_probs=65.5

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATG-KPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||++.+ ..++.++|+||+||++|+|++| .+||... ...... ..  .......|...+.++.+++.+||+.
T Consensus       167 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~-~~~~~~-~~--~~~~~~~~~~~~~~~~~li~~~l~~  242 (258)
T cd05078         167 RIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL-DSQKKL-QF--YEDRHQLPAPKWTELANLINQCMDY  242 (258)
T ss_pred             cCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc-cHHHHH-HH--HHccccCCCCCcHHHHHHHHHHhcc
Confidence            467999998876 4589999999999999999998 4666432 222111 11  1122334555678899999999999


Q ss_pred             CCCCCCChhhhhcC
Q psy14555         79 DPDKRATAGELLED   92 (222)
Q Consensus        79 ~p~~R~s~~~~l~h   92 (222)
                      +|.+||++++++..
T Consensus       243 ~p~~Rps~~~il~~  256 (258)
T cd05078         243 EPDFRPSFRAIIRD  256 (258)
T ss_pred             ChhhCCCHHHHHHh
Confidence            99999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG1290|consensus

Probab=99.51  E-value=2.3e-14  Score=118.74  Aligned_cols=98  Identities=28%  Similarity=0.394  Sum_probs=71.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----ChHHHHHHhh-----------hcc---------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELG-----SPQAALYRVG-----------FHK---------   55 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~-----~~~~~~~~~~-----------~~~---------   55 (222)
                      |.-|-|||++.+.+|+..+||||++|++|||+||...|....     .....+..+.           ..+         
T Consensus       414 TRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr  493 (590)
T KOG1290|consen  414 TRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNR  493 (590)
T ss_pred             hhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhcc
Confidence            678999999999999999999999999999999998885211     1111111110           000         


Q ss_pred             -------CCC-------------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 -------MHP-------------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 -------~~~-------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                             ...             .++..-..++.+|+.-||..+|.+|++|.+++.|||+...
T Consensus       494 ~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~  556 (590)
T KOG1290|consen  494 RGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPV  556 (590)
T ss_pred             ccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCC
Confidence                   001             1222334567899999999999999999999999999754

>KOG1024|consensus

Probab=99.51  E-value=1.9e-14  Score=116.58  Aligned_cols=87  Identities=23%  Similarity=0.358  Sum_probs=77.1

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      -||++|.+....|+.++|+|||||++|||++ |+.||.+.  ...++......+.+...|.++++++...|..||...|.
T Consensus       463 kWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI--DPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpe  540 (563)
T KOG1024|consen  463 KWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI--DPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPE  540 (563)
T ss_pred             cccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc--CHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcc
Confidence            4899999999999999999999999999999 99999854  34555556667777788999999999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||+++|+..
T Consensus       541 eRPsf~Qlv~  550 (563)
T KOG1024|consen  541 ERPSFSQLVI  550 (563)
T ss_pred             cCCCHHHHHH
Confidence            9999999865

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.51  E-value=4e-14  Score=112.79  Aligned_cols=88  Identities=19%  Similarity=0.275  Sum_probs=64.2

Q ss_pred             CcceecCcccC-CCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSV-NSSYSPQADIWSLGCTIVEMA-TGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~-~~~y~~~~DiWS~Gvil~ell-~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+. ++.|+.++||||+||++|+|+ .|..||.....  ..........  .......+.++.+|+.+||..
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~  246 (262)
T cd05077         171 RIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL--AEKERFYEGQ--CMLVTPSCKELADLMTHCMNY  246 (262)
T ss_pred             cccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHhcC--ccCCCCChHHHHHHHHHHcCC
Confidence            45799999876 567999999999999999998 58888864221  1111111111  112223467889999999999


Q ss_pred             CCCCCCChhhhhcC
Q psy14555         79 DPDKRATAGELLED   92 (222)
Q Consensus        79 ~p~~R~s~~~~l~h   92 (222)
                      +|.+||++.+++.+
T Consensus       247 dp~~Rp~~~~il~~  260 (262)
T cd05077         247 DPNQRPFFRAIMRD  260 (262)
T ss_pred             ChhhCcCHHHHHHh
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG1095|consensus

Probab=99.51  E-value=2e-14  Score=129.86  Aligned_cols=87  Identities=21%  Similarity=0.429  Sum_probs=73.5

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      -||+||.+..+.|+.++|||||||++||+++ |..||+...+... +......+ ..+.|..++....++|..||+.+|.
T Consensus       869 kWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe  946 (1025)
T KOG1095|consen  869 KWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-LLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPE  946 (1025)
T ss_pred             ecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-HHHHHhCC-ccCCCCCCChHHHHHHHHHccCChh
Confidence            3899999999999999999999999999999 9999986544322 22232333 7777889999999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||++..++.
T Consensus       947 ~RP~F~~i~~  956 (1025)
T KOG1095|consen  947 DRPSFRTIVE  956 (1025)
T ss_pred             hCccHHHHHh
Confidence            9999999887

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.50  E-value=4.7e-14  Score=112.04  Aligned_cols=88  Identities=18%  Similarity=0.376  Sum_probs=69.7

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||++..+.++.++|+||+||++|++++ |.+||....  ..............+.+...+..+.+++.+||..+|
T Consensus       167 ~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  244 (260)
T cd05073         167 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRP  244 (260)
T ss_pred             ccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCc
Confidence            35999999999999999999999999999998 999997532  223333223333444456678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       245 ~~Rp~~~~l~~  255 (260)
T cd05073         245 EERPTFEYIQS  255 (260)
T ss_pred             ccCcCHHHHHH
Confidence            99999988754

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0584|consensus

Probab=99.50  E-value=1.6e-14  Score=122.75  Aligned_cols=95  Identities=23%  Similarity=0.472  Sum_probs=79.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC-ccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP-AELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~   79 (222)
                      |+-+||||. +...|+..+||||||+.+.||.|+..||.+. .....+++....+..|... ..-.+++++||.+||.. 
T Consensus       207 TPEFMAPEm-YEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC-~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-  283 (632)
T KOG0584|consen  207 TPEFMAPEM-YEENYNELVDVYAFGMCMLEMVTSEYPYSEC-TNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-  283 (632)
T ss_pred             CccccChHH-HhhhcchhhhhhhhhHHHHHHHhccCChhhh-CCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-
Confidence            889999994 4589999999999999999999999999874 4456666666666554332 33478999999999999 


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      .+.|+++.++|.|+||...
T Consensus       284 ~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  284 KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             chhccCHHHHhhChhhccc
Confidence            9999999999999999864

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.50  E-value=3.9e-14  Score=114.79  Aligned_cols=91  Identities=12%  Similarity=0.036  Sum_probs=68.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHH--hh---hccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR--VG---FHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||...+..|+.++||||+||++|+|++|.+||.........+..  ..   ............+..+.+++..|
T Consensus       196 t~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (294)
T PHA02882        196 TLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECV  275 (294)
T ss_pred             CccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHH
Confidence            67899999999999999999999999999999999999754332221111  00   00000111234578899999999


Q ss_pred             cccCCCCCCChhhhhc
Q psy14555         76 FEKDPDKRATAGELLE   91 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~   91 (222)
                      |..+|.+||++.++++
T Consensus       276 ~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        276 TKLSYEEKPDYDALIK  291 (294)
T ss_pred             HhCCCCCCCCHHHHHH
Confidence            9999999999998864

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.50  E-value=4.5e-14  Score=112.66  Aligned_cols=87  Identities=17%  Similarity=0.408  Sum_probs=69.3

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      .|++||++.++.++.++|+||+||++||+++ |..||....  ..............+.+..++..+.+++.+||..+|.
T Consensus       176 ~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~  253 (269)
T cd05065         176 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRN  253 (269)
T ss_pred             eecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChh
Confidence            5999999999999999999999999999886 999997532  2222222223333444566788999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||++.+++.
T Consensus       254 ~Rp~~~~i~~  263 (269)
T cd05065         254 ARPKFGQIVS  263 (269)
T ss_pred             hCcCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0608|consensus

Probab=99.50  E-value=2.3e-14  Score=122.28  Aligned_cols=100  Identities=24%  Similarity=0.438  Sum_probs=75.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hc-cCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FH-KMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |.-|+|||++...+|+-.|||||.|||||||+.|++||.... +.+...++. +. -.....-..++.++.++|.++.. 
T Consensus       834 t~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t-p~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-  911 (1034)
T KOG0608|consen  834 TPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT-PGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-  911 (1034)
T ss_pred             CCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC-CCcceeeeeehhhccccccccccCHHHHHHHHHHhc-
Confidence            678999999999999999999999999999999999997432 222222221 11 12223345789999999988654 


Q ss_pred             CCCCCC---ChhhhhcCcccccccccc
Q psy14555         79 DPDKRA---TAGELLEDPFLADLTATR  102 (222)
Q Consensus        79 ~p~~R~---s~~~~l~h~~~~~~~~~~  102 (222)
                      +++.|.   .+.++..||||++.++..
T Consensus       912 sad~RLGkng~d~vKaHpfFkgIDfss  938 (1034)
T KOG0608|consen  912 SADSRLGKNGADQVKAHPFFKGIDFSS  938 (1034)
T ss_pred             ChhhhhcccchhhhhcCccccccchHh
Confidence            477775   567899999999987654

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.49  E-value=5.9e-14  Score=114.14  Aligned_cols=89  Identities=21%  Similarity=0.330  Sum_probs=70.2

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||++.+..++.++|+||+||++||+++ |..||.+.  .................+...+..+.+++.+||..+|
T Consensus       175 ~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p  252 (303)
T cd05110         175 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI--PTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDA  252 (303)
T ss_pred             cccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            46999999999999999999999999999997 89999643  2233323323333344455678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++..
T Consensus       253 ~~Rp~~~~l~~~  264 (303)
T cd05110         253 DSRPKFKELAAE  264 (303)
T ss_pred             hhCcCHHHHHHH
Confidence            999999998774

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0665|consensus

Probab=99.49  E-value=4.9e-14  Score=111.41  Aligned_cols=96  Identities=19%  Similarity=0.338  Sum_probs=70.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhcc------------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHK------------------------   55 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~------------------------   55 (222)
                      |.+|-|||++.+-.|.+.|||||+||++.||+.|+.-|++...-+ ...+. ...+                        
T Consensus       180 tRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~id-Q~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y  258 (369)
T KOG0665|consen  180 TRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHID-QWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQY  258 (369)
T ss_pred             eeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHH-HHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHh
Confidence            578999999999999999999999999999999999887421111 11000 0000                        


Q ss_pred             --------CCC-CCC------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         56 --------MHP-EIP------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        56 --------~~~-~~~------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                              .+. .++      +.-+..+.+++.+||..+|.+|.++.++|+|||++-
T Consensus       259 ~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~v  315 (369)
T KOG0665|consen  259 QAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKV  315 (369)
T ss_pred             hccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeee
Confidence                    000 001      122456889999999999999999999999999983

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.49  E-value=7.3e-14  Score=110.31  Aligned_cols=89  Identities=20%  Similarity=0.414  Sum_probs=71.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|++||...+..++.++|+||+|+++|+|++ |.+||..  ..................+...+.++.+++.+||..+
T Consensus       167 ~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  244 (258)
T smart00219      167 PIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG--MSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAED  244 (258)
T ss_pred             cccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCC
Confidence            357999999988899999999999999999998 8899864  2333333333333444455668999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       245 p~~Rpt~~~ll~  256 (258)
T smart00219      245 PEDRPTFSELVE  256 (258)
T ss_pred             hhhCcCHHHHHh
Confidence            999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.49  E-value=7.1e-14  Score=110.60  Aligned_cols=88  Identities=19%  Similarity=0.356  Sum_probs=69.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||.+.++.++.++|+||+||++|+|++ |.+||....  ................+..++..+.+++.+||..+|
T Consensus       161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  238 (254)
T cd05083         161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS--LKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEP  238 (254)
T ss_pred             ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC--HHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCCh
Confidence            46999999999999999999999999999998 999997432  222222223333344456678999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      ..||++.+++.
T Consensus       239 ~~Rp~~~~l~~  249 (254)
T cd05083         239 KKRPSFHKLRE  249 (254)
T ss_pred             hhCcCHHHHHH
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0600|consensus

Probab=99.49  E-value=4.4e-14  Score=117.51  Aligned_cols=97  Identities=22%  Similarity=0.391  Sum_probs=71.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC-------CCC-----------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP-------EIP-----------   61 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~-------~~~-----------   61 (222)
                      |.-|-+||.+++ ..|+.++|+||+|||+.||+.|++.|.+..+..+........+.+.       .+|           
T Consensus       282 TLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y  361 (560)
T KOG0600|consen  282 TLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPY  361 (560)
T ss_pred             EeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcc
Confidence            567889995554 5799999999999999999999999986433322221111111110       000           


Q ss_pred             --------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         62 --------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        62 --------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                              ..++..+.+|+..+|..||.+|.|+.+++.++||..
T Consensus       362 ~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  362 KRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             cchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence                    235788899999999999999999999999999954

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.49  E-value=6.3e-14  Score=112.67  Aligned_cols=90  Identities=17%  Similarity=0.249  Sum_probs=67.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHH-------------HHhhhccCCCCCCccccHHH
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL-------------YRVGFHKMHPEIPAELSDKA   68 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~   68 (222)
                      ..|++||...+..++.++||||+||++|+|++|..||..........             ..........+.+...+..+
T Consensus       174 ~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (283)
T cd05080         174 VFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEV  253 (283)
T ss_pred             ceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHH
Confidence            45899999988999999999999999999999999985321110000             00111122233456678999


Q ss_pred             HHHHHHhcccCCCCCCChhhhhc
Q psy14555         69 KQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        69 ~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      .+++.+||..+|++||++++++.
T Consensus       254 ~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         254 YILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHHHhccChhhCCCHHHHHH
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.49  E-value=8.2e-14  Score=117.69  Aligned_cols=90  Identities=23%  Similarity=0.386  Sum_probs=71.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      +.|||||.+.+..++.++|+||+||++|||++ |..||..... .............+..|..++..+.+++.+||..+|
T Consensus       305 ~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P  383 (401)
T cd05107         305 LKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM-NEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKF  383 (401)
T ss_pred             CceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            56999999999999999999999999999998 8999965322 222223223334445566788999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++..
T Consensus       384 ~~RPs~~ell~~  395 (401)
T cd05107         384 EIRPDFSQLVHL  395 (401)
T ss_pred             hHCcCHHHHHHH
Confidence            999999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.49  E-value=6.7e-14  Score=115.91  Aligned_cols=90  Identities=22%  Similarity=0.381  Sum_probs=71.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.+..|+.++|+||+||++|++++ |..||...... ...............|...++.+.+++.+||..+|
T Consensus       245 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p  323 (343)
T cd05103         245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEP  323 (343)
T ss_pred             cceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCCh
Confidence            45999999999999999999999999999997 99999753322 22222223333344455678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.|
T Consensus       324 ~~Rps~~eil~~  335 (343)
T cd05103         324 SQRPTFSELVEH  335 (343)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.48  E-value=7.6e-14  Score=111.27  Aligned_cols=88  Identities=17%  Similarity=0.380  Sum_probs=69.4

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||.+.++.++.++|+||+||++|++++ |..||....  ..............+.+...+..+.+++.+||+.+|
T Consensus       173 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  250 (267)
T cd05066         173 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS--NQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDR  250 (267)
T ss_pred             eeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC--HHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCc
Confidence            36999999999999999999999999999887 999997532  222222223333344455678899999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       251 ~~Rp~~~~i~~  261 (267)
T cd05066         251 NERPKFEQIVS  261 (267)
T ss_pred             hhCCCHHHHHH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.48  E-value=7.7e-14  Score=112.77  Aligned_cols=88  Identities=17%  Similarity=0.352  Sum_probs=66.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHhhh-------ccCCCCCCccccHHHHHHH
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT--GKPPFIELGSPQAALYRVGF-------HKMHPEIPAELSDKAKQFI   72 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~--g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~li   72 (222)
                      ..|+|||++.+..++.++||||+||++|+|++  |..||.....  ........       .......+...+.++.+++
T Consensus       196 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  273 (296)
T cd05051         196 IRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD--QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELM  273 (296)
T ss_pred             ceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh--HHHHHHHHhccccccccccCCCccCCCHHHHHHH
Confidence            46999999998899999999999999999998  7788864322  22222111       1111223445678999999


Q ss_pred             HHhcccCCCCCCChhhhhc
Q psy14555         73 LRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~   91 (222)
                      .+||..+|.+||++.+++.
T Consensus       274 ~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         274 LECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHhccChhcCCCHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.48  E-value=6e-14  Score=112.05  Aligned_cols=89  Identities=17%  Similarity=0.440  Sum_probs=69.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      +.|++||....+.++.++|+||+||++|+|++ |.+||...  .................+...+..+.+++.+||..+|
T Consensus       179 ~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p  256 (273)
T cd05074         179 VKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV--ENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEP  256 (273)
T ss_pred             hhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC--CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCh
Confidence            46899999999999999999999999999999 89999643  2233333222333334445678899999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       257 ~~Rps~~~~~~~  268 (273)
T cd05074         257 KCRPSFQHLRDQ  268 (273)
T ss_pred             hhCcCHHHHHHH
Confidence            999999998753

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0200|consensus

Probab=99.47  E-value=8.4e-14  Score=123.20  Aligned_cols=87  Identities=23%  Similarity=0.435  Sum_probs=76.7

Q ss_pred             eecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCCC
Q psy14555          4 IFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDK   82 (222)
Q Consensus         4 y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~   82 (222)
                      |||||.+....|+.++||||+||+|||+++ |..||++... ...+......+.....|..++.++.++|+.||..+|.+
T Consensus       487 WmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~  565 (609)
T KOG0200|consen  487 WMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPED  565 (609)
T ss_pred             ecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCccc
Confidence            899999999999999999999999999999 9999986432 34445566778888889999999999999999999999


Q ss_pred             CCChhhhhc
Q psy14555         83 RATAGELLE   91 (222)
Q Consensus        83 R~s~~~~l~   91 (222)
                      ||++.++..
T Consensus       566 RP~F~~~~~  574 (609)
T KOG0200|consen  566 RPTFSECVE  574 (609)
T ss_pred             CCCHHHHHH
Confidence            999999865

>KOG0193|consensus

Probab=99.47  E-value=1.4e-14  Score=122.80  Aligned_cols=89  Identities=20%  Similarity=0.397  Sum_probs=71.5

Q ss_pred             cceecCcccCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCC---CCccccHHHHHHHHHh
Q psy14555          2 NVIFLTQYSVNS---SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE---IPAELSDKAKQFILRC   75 (222)
Q Consensus         2 ~~y~aPe~~~~~---~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~   75 (222)
                      .+|||||++...   .|++.+||||||||+|||++|..||. .++.+..++.++..-..++   .-...+.++++|+..|
T Consensus       554 ilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C  632 (678)
T KOG0193|consen  554 LLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDC  632 (678)
T ss_pred             hhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHH
Confidence            589999988754   69999999999999999999999997 4555566665554322222   2245677999999999


Q ss_pred             cccCCCCCCChhhhhc
Q psy14555         76 FEKDPDKRATAGELLE   91 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~   91 (222)
                      |..++.+||.+.+++.
T Consensus       633 ~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  633 WKFDREERPLFPQLLS  648 (678)
T ss_pred             HhcCcccCccHHHHHH
Confidence            9999999999999986

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.47  E-value=1e-13  Score=112.68  Aligned_cols=89  Identities=15%  Similarity=0.313  Sum_probs=65.9

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHh------hhccCCCCCCccccHHHHHHHH
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT--GKPPFIELGSPQAALYRV------GFHKMHPEIPAELSDKAKQFIL   73 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~--g~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~   73 (222)
                      ..|||||++..+.|+.++||||+||++|+|++  +..||..... .......      .........+..++..+.+|+.
T Consensus       204 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  282 (304)
T cd05096         204 IRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTD-EQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELML  282 (304)
T ss_pred             ccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCH-HHHHHHHHHHhhhccccccccCCCCCCHHHHHHHH
Confidence            46999999999999999999999999999986  5678864322 1111111      0111122334567889999999


Q ss_pred             HhcccCCCCCCChhhhhc
Q psy14555         74 RCFEKDPDKRATAGELLE   91 (222)
Q Consensus        74 ~~l~~~p~~R~s~~~~l~   91 (222)
                      +||..+|.+||++.++..
T Consensus       283 ~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         283 QCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHccCCchhCcCHHHHHH
Confidence            999999999999999843

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.47  E-value=1.2e-13  Score=110.75  Aligned_cols=88  Identities=20%  Similarity=0.367  Sum_probs=70.6

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||......++.++|+||+||++|++++ |..||...  ....+............+...+..+.+++.+||..+|
T Consensus       175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p  252 (279)
T cd05057         175 IKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI--PAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDA  252 (279)
T ss_pred             ccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC--CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            46999999988999999999999999999998 99999743  2333333333344445556678899999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       253 ~~Rp~~~~l~~  263 (279)
T cd05057         253 ESRPTFKELIN  263 (279)
T ss_pred             hhCCCHHHHHH
Confidence            99999998765

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.45  E-value=2e-13  Score=110.56  Aligned_cols=89  Identities=17%  Similarity=0.332  Sum_probs=66.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHhh------hccCCCCCCccccHHHHHHHH
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT--GKPPFIELGSPQAALYRVG------FHKMHPEIPAELSDKAKQFIL   73 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~--g~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~   73 (222)
                      ..|+|||+...+.++.++|+||+||++|+|++  |..||..... ...+....      ........+...+..+.+|+.
T Consensus       195 ~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  273 (295)
T cd05097         195 IRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD-EQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMM  273 (295)
T ss_pred             eeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh-HHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHH
Confidence            46999999999999999999999999999988  6778864322 12111110      111112234456889999999


Q ss_pred             HhcccCCCCCCChhhhhc
Q psy14555         74 RCFEKDPDKRATAGELLE   91 (222)
Q Consensus        74 ~~l~~~p~~R~s~~~~l~   91 (222)
                      +||..+|.+||++.++++
T Consensus       274 ~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         274 RCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHcCCCchhCcCHHHHHH
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.45  E-value=1.7e-13  Score=109.92  Aligned_cols=88  Identities=23%  Similarity=0.366  Sum_probs=65.3

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHH-hCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMA-TGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell-~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+.+ ..++.++|+||+||++||++ +|..||.....  ........  .....+...+..+.+++.+||..
T Consensus       183 ~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~  258 (274)
T cd05076         183 RIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP--SEKERFYE--KKHRLPEPSCKELATLISQCLTY  258 (274)
T ss_pred             CCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--HHHHHHHH--hccCCCCCCChHHHHHHHHHccc
Confidence            467999998865 56899999999999999995 69999964322  21111111  11223334567899999999999


Q ss_pred             CCCCCCChhhhhcC
Q psy14555         79 DPDKRATAGELLED   92 (222)
Q Consensus        79 ~p~~R~s~~~~l~h   92 (222)
                      +|.+||++.+++.+
T Consensus       259 ~p~~Rps~~~il~~  272 (274)
T cd05076         259 EPTQRPSFRTILRD  272 (274)
T ss_pred             ChhhCcCHHHHHHh
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.45  E-value=2.2e-13  Score=108.71  Aligned_cols=89  Identities=25%  Similarity=0.443  Sum_probs=62.4

Q ss_pred             cceecCcccCCC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccC---CCCCCccccHHHHH
Q psy14555          2 NVIFLTQYSVNS-------SYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKM---HPEIPAELSDKAKQ   70 (222)
Q Consensus         2 ~~y~aPe~~~~~-------~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   70 (222)
                      ..|+|||++...       .++.++|+||+||++|+|++ |..||..................   .+......+....+
T Consensus       166 ~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (269)
T cd05087         166 LRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYE  245 (269)
T ss_pred             ccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHH
Confidence            469999987542       46789999999999999996 99999754332221111111111   12222346788999


Q ss_pred             HHHHhcccCCCCCCChhhhhc
Q psy14555         71 FILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        71 li~~~l~~~p~~R~s~~~~l~   91 (222)
                      ++.+|| .+|.+||++.+++.
T Consensus       246 l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         246 VMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHh-cCcccCCCHHHHHH
Confidence            999999 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG4236|consensus

Probab=99.45  E-value=4.2e-15  Score=124.42  Aligned_cols=97  Identities=23%  Similarity=0.296  Sum_probs=82.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++..++|+.+-|+||+|||+|.-++|..||.+..+. ...........++..|..++..+.+||..+|+..-
T Consensus       729 TPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI-ndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm  807 (888)
T KOG4236|consen  729 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI-NDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKM  807 (888)
T ss_pred             CccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch-hHHhhccccccCCCchhhcCHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999653222 22222333455667788999999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+|.+....+.|||+++.
T Consensus       808 ~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  808 RKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHhcchHhhccchhhhcc
Confidence            999999999999999875

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.44  E-value=2.4e-13  Score=108.72  Aligned_cols=90  Identities=23%  Similarity=0.475  Sum_probs=68.7

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||.+.+..++.++|+||+|+++|++++ |..||.... .................+..++..+.+++.+||..+|
T Consensus       182 ~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p  260 (275)
T cd05046         182 LRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS-DEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNP  260 (275)
T ss_pred             EeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc-hHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            35999999988889999999999999999998 888996432 2222222221222233345678999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       261 ~~Rp~~~~~l~~  272 (275)
T cd05046         261 KDRPSFSELVSA  272 (275)
T ss_pred             ccCCCHHHHHHH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0670|consensus

Probab=99.44  E-value=2.3e-14  Score=119.74  Aligned_cols=95  Identities=24%  Similarity=0.464  Sum_probs=70.8

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-CC------------------------
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MH------------------------   57 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~------------------------   57 (222)
                      -|-|||++++-.|+...|+||+||.||||.+|+..|++..+.....+.....+ ++                        
T Consensus       600 FYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e  679 (752)
T KOG0670|consen  600 FYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIE  679 (752)
T ss_pred             hccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEe
Confidence            48899999999999999999999999999999999986544332211111111 00                        


Q ss_pred             -----------------C------------CCC---ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         58 -----------------P------------EIP---AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        58 -----------------~------------~~~---~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                                       |            .+|   ...-..+++|+.+||..||.+|.++.++|.||||+.
T Consensus       680 ~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  680 VDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             ccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                             0            001   112345779999999999999999999999999974

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.44  E-value=1.9e-13  Score=110.74  Aligned_cols=89  Identities=17%  Similarity=0.351  Sum_probs=66.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHh------hhccCCCCCCccccHHHHHHHH
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT--GKPPFIELGSPQAALYRV------GFHKMHPEIPAELSDKAKQFIL   73 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~--g~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~   73 (222)
                      ..|++||+..++.|+.++|+||+||++|||++  |..||..... .......      .......+.+..++..+.+|+.
T Consensus       196 ~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  274 (296)
T cd05095         196 IRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD-EQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLML  274 (296)
T ss_pred             cccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh-HHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHH
Confidence            46999998888899999999999999999998  7788864322 1111111      0111122334557789999999


Q ss_pred             HhcccCCCCCCChhhhhc
Q psy14555         74 RCFEKDPDKRATAGELLE   91 (222)
Q Consensus        74 ~~l~~~p~~R~s~~~~l~   91 (222)
                      +||..+|.+||++.++..
T Consensus       275 ~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         275 SCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHcCCCcccCCCHHHHHH
Confidence            999999999999998864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0594|consensus

Probab=99.44  E-value=1.9e-13  Score=109.38  Aligned_cols=98  Identities=27%  Similarity=0.408  Sum_probs=72.5

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC-----------------C-CC-
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH-----------------P-EI-   60 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~-----------------~-~~-   60 (222)
                      |.-|-|||++++. .|+..+|+||+|||++||+++++-|++..+...........+.+                 . .+ 
T Consensus       183 TlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~  262 (323)
T KOG0594|consen  183 TLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWP  262 (323)
T ss_pred             EeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCC
Confidence            4568999988877 79999999999999999999999998654432221111111111                 0 00 


Q ss_pred             -C-------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         61 -P-------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        61 -~-------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                       +       ...+.+..+++.+||+.+|.+|.++..++.||||...
T Consensus       263 ~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  263 GPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             CccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence             1       1123578999999999999999999999999999864

>KOG1006|consensus

Probab=99.44  E-value=4.9e-14  Score=109.04  Aligned_cols=97  Identities=26%  Similarity=0.336  Sum_probs=75.4

Q ss_pred             cceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC-CCC---ccccHHHHHHHHHh
Q psy14555          2 NVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP-EIP---AELSDKAKQFILRC   75 (222)
Q Consensus         2 ~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~li~~~   75 (222)
                      .+|||||.+-.  .+|+-.+|+||+|++|||+.+|..||......-+.+..+.....+- ..+   ..++..+..|+.-|
T Consensus       231 rpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintC  310 (361)
T KOG1006|consen  231 RPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTC  310 (361)
T ss_pred             ccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHH
Confidence            48999996653  3599999999999999999999999986544444444443322221 112   34789999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.++-+.||...+++.+||++..
T Consensus       311 l~Kd~~~Rpky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  311 LIKDRSDRPKYDDLKKFPFYRMY  333 (361)
T ss_pred             hhcccccCcchhhhhcCchhhhh
Confidence            99999999999999999999764

>KOG4257|consensus

Probab=99.43  E-value=1e-13  Score=118.27  Aligned_cols=87  Identities=15%  Similarity=0.296  Sum_probs=74.8

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      -|||||.+..+.++.++|||-|||.+||++. |..||.+..+.+  +......+...+.|+.+++.+..|+.+||..+|.
T Consensus       557 KWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD--VI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~  634 (974)
T KOG4257|consen  557 KWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD--VIGHIENGERLPCPPNCPPALYSLMSKCWAYEPS  634 (974)
T ss_pred             eecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc--eEEEecCCCCCCCCCCCChHHHHHHHHHhccCcc
Confidence            4899999999999999999999999999988 999998765433  3333456778888999999999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      +||.+.++..
T Consensus       635 kRPrftei~~  644 (974)
T KOG4257|consen  635 KRPRFTEIKA  644 (974)
T ss_pred             cCCcHHHHHH
Confidence            9999877643

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.42  E-value=2.3e-13  Score=109.48  Aligned_cols=91  Identities=23%  Similarity=0.331  Sum_probs=66.7

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-------------hHHHHHHhhhccCCCCCCccccHHH
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS-------------PQAALYRVGFHKMHPEIPAELSDKA   68 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~   68 (222)
                      ..|+|||+..++.++.++|+||+||++|+|+++..|+.....             ...............+.+..++..+
T Consensus       176 ~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (284)
T cd05079         176 VFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEV  255 (284)
T ss_pred             ccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHH
Confidence            469999999999999999999999999999998766421100             0011111111222334456688999


Q ss_pred             HHHHHHhcccCCCCCCChhhhhcC
Q psy14555         69 KQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        69 ~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      .+|+.+||..+|.+||++.+++.+
T Consensus       256 ~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         256 YQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHHHHccCCcccCcCHHHHHHH
Confidence            999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0199|consensus

Probab=99.42  E-value=2.2e-13  Score=117.48  Aligned_cols=93  Identities=24%  Similarity=0.334  Sum_probs=80.4

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|.|||.+..+.|+.++|+|++||++|||++ |.-||.+.  ....++.....+.....|..++.+..++++.||..+|
T Consensus       279 fAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~--~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~p  356 (1039)
T KOG0199|consen  279 FAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC--RGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNP  356 (1039)
T ss_pred             ccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC--CHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCc
Confidence            35889999999999999999999999999999 89999854  4455666656778888899999999999999999999


Q ss_pred             CCCCChhhhhcCcccc
Q psy14555         81 DKRATAGELLEDPFLA   96 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~   96 (222)
                      .+||+|..|...-++.
T Consensus       357 aDRptFsair~~~~l~  372 (1039)
T KOG0199|consen  357 ADRPTFSAIREDLVLA  372 (1039)
T ss_pred             cccccHHHHHHhHHHH
Confidence            9999999987654443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.41  E-value=2.2e-13  Score=126.88  Aligned_cols=92  Identities=18%  Similarity=0.321  Sum_probs=64.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHhhhcc------CCC------CCCcccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP---QAALYRVGFHK------MHP------EIPAELS   65 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~---~~~~~~~~~~~------~~~------~~~~~~~   65 (222)
                      |..|||||++.+..|+.++||||+||++|||++|+.||......   .....+.....      ..+      ..+....
T Consensus       841 t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  920 (968)
T PLN00113        841 SSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEI  920 (968)
T ss_pred             cccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHH
Confidence            47899999999999999999999999999999999998521111   11111110000      001      1112233


Q ss_pred             HHHHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         66 DKAKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        66 ~~~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      .++.+++.+||..+|.+||++.++++.
T Consensus       921 ~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        921 VEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            467789999999999999999999875

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.39  E-value=4.5e-13  Score=121.41  Aligned_cols=89  Identities=18%  Similarity=0.212  Sum_probs=65.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||.+.+..++.++|+||+||++|||++|..||..... ......... ..........++..+.+++.+||..+
T Consensus       194 T~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~-~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~D  272 (932)
T PRK13184        194 TPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG-RKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVD  272 (932)
T ss_pred             CCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch-hhhhhhhhccChhhccccccCCHHHHHHHHHHccCC
Confidence            6789999999999999999999999999999999999964221 111111111 11111112457888999999999999


Q ss_pred             CCCCCChhhhh
Q psy14555         80 PDKRATAGELL   90 (222)
Q Consensus        80 p~~R~s~~~~l   90 (222)
                      |.+|++..+.+
T Consensus       273 P~kR~ss~eeL  283 (932)
T PRK13184        273 PAERYSSVQEL  283 (932)
T ss_pred             hhhCcCHHHHH
Confidence            99998765544

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.38  E-value=1.1e-12  Score=105.48  Aligned_cols=89  Identities=18%  Similarity=0.268  Sum_probs=65.3

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH--------------HHHHHhhhccCCCCCCccccHHH
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ--------------AALYRVGFHKMHPEIPAELSDKA   68 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~   68 (222)
                      .|++||...+..++.++|+||+||++|||++|..|+.......              .............+.+..++..+
T Consensus       176 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (284)
T cd05081         176 FWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEI  255 (284)
T ss_pred             EeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHH
Confidence            5999999999999999999999999999999876653211000              00011111222333445678899


Q ss_pred             HHHHHHhcccCCCCCCChhhhhc
Q psy14555         69 KQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        69 ~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      .+|+.+||..+|.+|||+.+++.
T Consensus       256 ~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         256 YAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHHHHccCChhhCCCHHHHHH
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1989|consensus

Probab=99.37  E-value=4.7e-13  Score=117.62  Aligned_cols=87  Identities=23%  Similarity=0.359  Sum_probs=67.1

Q ss_pred             CcceecCccc---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYS---VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~---~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|-|||.+   .+...++|+|||++||+||-||....||.+-+.  ..+.   ...+..+.....+..+++||..||+
T Consensus       218 Tp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--laIl---ng~Y~~P~~p~ys~~l~~LI~~mL~  292 (738)
T KOG1989|consen  218 TPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--LAIL---NGNYSFPPFPNYSDRLKDLIRTMLQ  292 (738)
T ss_pred             CccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--eeEE---eccccCCCCccHHHHHHHHHHHHhc
Confidence            7899999943   466789999999999999999999999954211  1111   2222333335689999999999999


Q ss_pred             cCCCCCCChhhhhcC
Q psy14555         78 KDPDKRATAGELLED   92 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h   92 (222)
                      .+|.+||++.+++.+
T Consensus       293 ~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  293 PNPDERPNIYQVLEE  307 (738)
T ss_pred             cCcccCCCHHHHHHH
Confidence            999999999887653

>KOG4278|consensus

Probab=99.37  E-value=1.6e-12  Score=111.14  Aligned_cols=85  Identities=19%  Similarity=0.365  Sum_probs=76.0

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      -|.|||.+....++-++|||+|||+|||+.+ |-.||++  -....++.....++....|..+++.+.+||..||+++|+
T Consensus       431 KWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG--idlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPs  508 (1157)
T KOG4278|consen  431 KWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPS  508 (1157)
T ss_pred             cccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC--ccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcc
Confidence            3779999999999999999999999999998 8999985  455666666677888888999999999999999999999


Q ss_pred             CCCChhhh
Q psy14555         82 KRATAGEL   89 (222)
Q Consensus        82 ~R~s~~~~   89 (222)
                      +||+++++
T Consensus       509 DRPsFaei  516 (1157)
T KOG4278|consen  509 DRPSFAEI  516 (1157)
T ss_pred             cCccHHHH
Confidence            99999886

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.36  E-value=6.1e-13  Score=106.68  Aligned_cols=90  Identities=20%  Similarity=0.330  Sum_probs=67.3

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-------------HHHHHHhhhccCCCCCCccccHHH
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-------------QAALYRVGFHKMHPEIPAELSDKA   68 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~   68 (222)
                      ..|++||...+..++.++|+||+||++|+|++|..|+......             ................+..++..+
T Consensus       176 ~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (284)
T cd05038         176 IFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEV  255 (284)
T ss_pred             ccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHH
Confidence            3589999999899999999999999999999999998532111             111111112222333345667889


Q ss_pred             HHHHHHhcccCCCCCCChhhhhc
Q psy14555         69 KQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        69 ~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      .+++.+||..+|.+||++.+++.
T Consensus       256 ~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         256 YDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHHHhccChhhCCCHHHHHH
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.36  E-value=1.8e-12  Score=102.54  Aligned_cols=86  Identities=23%  Similarity=0.375  Sum_probs=63.6

Q ss_pred             cceecCcccCCC--CCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          2 NVIFLTQYSVNS--SYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         2 ~~y~aPe~~~~~--~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      ..|+|||++.+.  .++.++|+||+||++|++++ |..||.... .........   .....+......+.+++.+||..
T Consensus       168 ~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~  243 (259)
T cd05037         168 IPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-SSEKERFYQ---DQHRLPMPDCAELANLINQCWTY  243 (259)
T ss_pred             CCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-chhHHHHHh---cCCCCCCCCchHHHHHHHHHhcc
Confidence            579999988877  78999999999999999999 678886432 211111111   11122222348899999999999


Q ss_pred             CCCCCCChhhhhc
Q psy14555         79 DPDKRATAGELLE   91 (222)
Q Consensus        79 ~p~~R~s~~~~l~   91 (222)
                      +|.+||++.+++.
T Consensus       244 ~p~~Rpt~~~il~  256 (259)
T cd05037         244 DPTKRPSFRAILR  256 (259)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.36  E-value=1.4e-12  Score=103.99  Aligned_cols=88  Identities=26%  Similarity=0.440  Sum_probs=62.4

Q ss_pred             cceecCcccC-------CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhh-cc---CCCCCCccccHHHH
Q psy14555          2 NVIFLTQYSV-------NSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGF-HK---MHPEIPAELSDKAK   69 (222)
Q Consensus         2 ~~y~aPe~~~-------~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~   69 (222)
                      ..|+|||+..       ...++.++|+||+||++|+|++ |..||..... ......... ..   ..+..+..++....
T Consensus       166 ~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (269)
T cd05042         166 LRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-EQVLKQVVREQDIKLPKPQLDLKYSDRWY  244 (269)
T ss_pred             ccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-HHHHHHHhhccCccCCCCcccccCCHHHH
Confidence            4599999764       3457889999999999999999 8889864322 222221111 11   11223446788889


Q ss_pred             HHHHHhcccCCCCCCChhhhhc
Q psy14555         70 QFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        70 ~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      +++..|| .+|.+||++++++.
T Consensus       245 ~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         245 EVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHh-cCcccccCHHHHHH
Confidence            9999998 59999999999865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.35  E-value=2.5e-12  Score=110.93  Aligned_cols=97  Identities=13%  Similarity=0.149  Sum_probs=66.4

Q ss_pred             CcceecCcccCCCC--------------------CC--chhhHHHHHHHHHHHHhCCC-CCCCCCChHHH---------H
Q psy14555          1 MNVIFLTQYSVNSS--------------------YS--PQADIWSLGCTIVEMATGKP-PFIELGSPQAA---------L   48 (222)
Q Consensus         1 t~~y~aPe~~~~~~--------------------y~--~~~DiWS~Gvil~ell~g~~-Pf~~~~~~~~~---------~   48 (222)
                      |+.|++||.+....                    |+  ..+|+||+||++|+|++|.. ||.........         .
T Consensus       373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~  452 (507)
T PLN03224        373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNR  452 (507)
T ss_pred             CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHH
Confidence            46799999876432                    22  34799999999999999875 66421111111         1


Q ss_pred             HHh-hhccCCCCCCccccHHHHHHHHHhcccCC---CCCCChhhhhcCccccc
Q psy14555         49 YRV-GFHKMHPEIPAELSDKAKQFILRCFEKDP---DKRATAGELLEDPFLAD   97 (222)
Q Consensus        49 ~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~R~s~~~~l~h~~~~~   97 (222)
                      ++. .........+...+..+++|+.+||..+|   .+|+|+++++.||||..
T Consensus       453 ~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        453 WRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             HHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            111 11122233345678999999999999876   68999999999999953

>KOG1035|consensus

Probab=99.34  E-value=1.9e-12  Score=117.39  Aligned_cols=92  Identities=26%  Similarity=0.358  Sum_probs=66.7

Q ss_pred             CcceecCcccCCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCC---CCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSS---YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE---IPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~---y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~   74 (222)
                      |+.|+|||...+..   |+.|+|+||+|+|++||+.   ||.. +.....+......+..+.   ++...-+..+.+|..
T Consensus       778 TalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T-sMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~  853 (1351)
T KOG1035|consen  778 TALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT-SMERASILTNLRKGSIPEPADFFDPEHPEEASLIRW  853 (1351)
T ss_pred             eeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCc-hHHHHHHHHhcccCCCCCCcccccccchHHHHHHHH
Confidence            89999999877766   9999999999999999995   5742 222222222222222221   233334556789999


Q ss_pred             hcccCCCCCCChhhhhcCcccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~   96 (222)
                      |++.||++||||.++|++.||.
T Consensus       854 Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  854 LLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             HhcCCCccCCCHHHHhhccCCC
Confidence            9999999999999999999875

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.34  E-value=3.7e-12  Score=101.69  Aligned_cols=89  Identities=21%  Similarity=0.372  Sum_probs=62.2

Q ss_pred             CcceecCcccCC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhh----ccCCCCCCccccHHH
Q psy14555          1 MNVIFLTQYSVN-------SSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGF----HKMHPEIPAELSDKA   68 (222)
Q Consensus         1 t~~y~aPe~~~~-------~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~   68 (222)
                      |..|+|||++..       ..++.++|+||+||++|||++ |.+||.... ..........    ....+..+..+++..
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (268)
T cd05086         164 PLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS-DREVLNHVIKDQQVKLFKPQLELPYSERW  242 (268)
T ss_pred             cccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHhhcccccCCCccCCCCcHHH
Confidence            357999998753       245789999999999999997 677886432 2222221111    112233345578899


Q ss_pred             HHHHHHhcccCCCCCCChhhhhc
Q psy14555         69 KQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        69 ~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      .+++..|| .+|.+||+++++++
T Consensus       243 ~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         243 YEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHh-hCcccCCCHHHHHH
Confidence            99999999 67999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0666|consensus

Probab=99.32  E-value=2.2e-12  Score=102.05  Aligned_cols=98  Identities=21%  Similarity=0.355  Sum_probs=67.9

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-----------HHHHHHhhhccCCCCCC-------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSP-----------QAALYRVGFHKMHPEIP-------   61 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-----------~~~~~~~~~~~~~~~~~-------   61 (222)
                      |.-|-|||.+++. .|++++|+|+.|||+.||++-.|-|.+....           ...++...-.+....+|       
T Consensus       202 TiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe  281 (438)
T KOG0666|consen  202 TIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPE  281 (438)
T ss_pred             EEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcc
Confidence            5569999966655 5899999999999999999988877532110           01111111011100110       


Q ss_pred             -------------------------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         62 -------------------------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        62 -------------------------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                               ..-++.+.+|+.++|+.||.+|.+++++++|+||+..
T Consensus       282 ~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  282 YQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             hHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence                                     0124458899999999999999999999999999864

>KOG1151|consensus

Probab=99.32  E-value=1.9e-12  Score=106.81  Aligned_cols=97  Identities=23%  Similarity=0.379  Sum_probs=73.4

Q ss_pred             CcceecCcccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh--h--ccCCCCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSV----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG--F--HKMHPEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~li   72 (222)
                      |+-|+.||++-    ....+.+|||||+|||+|.++.|+.||.. +.....++...  .  ....++..+.++.++++||
T Consensus       643 TYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh-nqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFI  721 (775)
T KOG1151|consen  643 TYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH-NQSQQDILQENTILKATEVQFPPKPVVSSEAKAFI  721 (775)
T ss_pred             eeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC-chhHHHHHhhhchhcceeccCCCCCccCHHHHHHH
Confidence            56788888433    33578899999999999999999999953 33333333321  1  1222344467899999999


Q ss_pred             HHhcccCCCCCCChhhhhcCcccccc
Q psy14555         73 LRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ++||......|....++..||+|...
T Consensus       722 RRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  722 RRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             HHHHHhhhhhhhhHHHHccCccccch
Confidence            99999999999999999999998753

>KOG0587|consensus

Probab=99.32  E-value=6.4e-13  Score=116.85  Aligned_cols=97  Identities=29%  Similarity=0.508  Sum_probs=78.4

Q ss_pred             CcceecCcccCCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNS-----SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~-----~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |++|||||++...     -|+..+|+||+|++..||..|.||+..+......+......+.....|..++..+.+||..|
T Consensus       186 tP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~c  265 (953)
T KOG0587|consen  186 TPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTC  265 (953)
T ss_pred             CcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHH
Confidence            7899999987654     37889999999999999999999997665433333322222233344788999999999999


Q ss_pred             cccCCCCCCChhhhhcCccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      |.+|-..||+..+++.|||++.
T Consensus       266 L~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  266 LVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             HhhccccCcchhhhccCCcccc
Confidence            9999999999999999999984

>KOG0586|consensus

Probab=99.31  E-value=5.6e-13  Score=113.22  Aligned_cols=95  Identities=23%  Similarity=0.397  Sum_probs=76.4

Q ss_pred             CcceecCcccCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYS-PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~-~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      +++|-|||...+..|. +.+|+||+|+++|.|++|..||.+ +.-....-++  .......|..++.+|.++|.++|..+
T Consensus       217 sppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG-~~lk~Lr~rv--l~gk~rIp~~ms~dce~lLrk~lvl~  293 (596)
T KOG0586|consen  217 SPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG-QNLKELRPRV--LRGKYRIPFYMSCDCEDLLRKFLVLN  293 (596)
T ss_pred             CCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC-cccccccchh--eeeeecccceeechhHHHHHHhhccC
Confidence            5789999999998885 689999999999999999999974 2211211122  22234567778999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+|+++++++.|.|....
T Consensus       294 Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  294 PSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             ccccCCHHHhhhhcccchh
Confidence            9999999999999998643

>KOG0606|consensus

Probab=99.30  E-value=2.5e-12  Score=115.39  Aligned_cols=100  Identities=20%  Similarity=0.284  Sum_probs=80.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh--hccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG--FHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|.|||++...+|+..||||++|+|+||.+-|..||.+  +..+.++...  ....-+.-....++++++++..+|..
T Consensus       221 TPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG--dtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~q  298 (1205)
T KOG0606|consen  221 TPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG--DTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQ  298 (1205)
T ss_pred             CccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC--CCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHh
Confidence            8999999999999999999999999999999999999974  4444443322  12222222455789999999999999


Q ss_pred             CCCCCC---ChhhhhcCcccccccccc
Q psy14555         79 DPDKRA---TAGELLEDPFLADLTATR  102 (222)
Q Consensus        79 ~p~~R~---s~~~~l~h~~~~~~~~~~  102 (222)
                      +|..|.   .+-++.+|+||+..+|..
T Consensus       299 np~~Rlgt~ga~evk~h~ff~~LDw~~  325 (1205)
T KOG0606|consen  299 NPLCRLGTGGALEVKQHGFFQLLDWKS  325 (1205)
T ss_pred             ChHhhcccchhhhhhhccceeecccch
Confidence            999994   567889999999888773

>KOG0669|consensus

Probab=99.29  E-value=6.4e-12  Score=96.86  Aligned_cols=97  Identities=24%  Similarity=0.337  Sum_probs=68.6

Q ss_pred             CcceecCccc-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-CCCC------------------C
Q psy14555          1 MNVIFLTQYS-VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MHPE------------------I   60 (222)
Q Consensus         1 t~~y~aPe~~-~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~------------------~   60 (222)
                      |..|..||.+ ..+.|+++.|+|..|||+.||.+|.+-+.+..+...........+ ..+.                  .
T Consensus       191 TLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl  270 (376)
T KOG0669|consen  191 TLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPL  270 (376)
T ss_pred             eeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCC
Confidence            6778888854 456799999999999999999999988864222111111111111 1111                  1


Q ss_pred             C-------------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         61 P-------------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        61 ~-------------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      |             -.-.+++.+|+.++|..||.+|+.+.++++|.||..
T Consensus       271 ~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k  320 (376)
T KOG0669|consen  271 PKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK  320 (376)
T ss_pred             CcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence            1             012457889999999999999999999999999975

>KOG0611|consensus

Probab=99.26  E-value=1.1e-11  Score=101.38  Aligned_cols=92  Identities=22%  Similarity=0.320  Sum_probs=72.0

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      +++|-+||.+.+..| ++.+|.||+||+||.|..|..||.+.  ....+.+.+..+. ...| ..+.++.-||.-||..+
T Consensus       215 SPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~--Dhk~lvrQIs~Ga-YrEP-~~PSdA~gLIRwmLmVN  290 (668)
T KOG0611|consen  215 SPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR--DHKRLVRQISRGA-YREP-ETPSDASGLIRWMLMVN  290 (668)
T ss_pred             CcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc--hHHHHHHHhhccc-ccCC-CCCchHHHHHHHHHhcC
Confidence            478999999999998 57899999999999999999999853  3333333322221 1222 34667788999999999


Q ss_pred             CCCCCChhhhhcCcccc
Q psy14555         80 PDKRATAGELLEDPFLA   96 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~   96 (222)
                      |.+|.|+.++..|=|+.
T Consensus       291 P~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  291 PERRATIEDIASHWWVN  307 (668)
T ss_pred             cccchhHHHHhhhheee
Confidence            99999999999998863

>KOG1027|consensus

Probab=99.24  E-value=1.1e-12  Score=114.94  Aligned_cols=95  Identities=22%  Similarity=0.284  Sum_probs=69.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCC-CCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHP-EIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~   78 (222)
                      |-.|+|||.+....-+.++|++|+||++|..++ |..||.   .....-..+....... ..-.....++.+||.+|+..
T Consensus       677 t~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG---d~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~  753 (903)
T KOG1027|consen  677 TSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG---DSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNP  753 (903)
T ss_pred             cccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC---chHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCC
Confidence            567999999999998999999999999988887 599994   3222211111111110 00011112899999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|..||++.+++.||+|...
T Consensus       754 dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  754 DPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             CcccCCCHHHHhCCCccCCh
Confidence            99999999999999999864

>KOG0194|consensus

Probab=99.19  E-value=8.5e-12  Score=105.58  Aligned_cols=88  Identities=18%  Similarity=0.382  Sum_probs=73.1

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      -|+|||.+..+.|+.++|||||||++||+.+ |..||++.... .....+.....+...|...+.....++..||..+|.
T Consensus       327 rWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~  405 (474)
T KOG0194|consen  327 RWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPE  405 (474)
T ss_pred             eecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChh
Confidence            4899999999999999999999999999999 88999865432 222333355666667778899999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      .||++.++.+
T Consensus       406 ~R~tm~~i~~  415 (474)
T KOG0194|consen  406 DRPTMSTIKK  415 (474)
T ss_pred             hccCHHHHHH
Confidence            9999998865

>KOG0603|consensus

Probab=99.17  E-value=1.7e-11  Score=104.76  Aligned_cols=93  Identities=24%  Similarity=0.382  Sum_probs=77.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.  ++..++|+||+|+++++|++|..||.+     ...  ..+.+..+..|..++..+.+++..++..+|
T Consensus       156 t~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----~~~--~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p  226 (612)
T KOG0603|consen  156 TYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----DTM--KRILKAELEMPRELSAEARSLFRQLFKRNP  226 (612)
T ss_pred             chhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----HHH--HHHhhhccCCchhhhHHHHHHHHHHHhhCH
Confidence            67899999987  889999999999999999999999953     111  123344566788899999999999999999


Q ss_pred             CCCCC-----hhhhhcCcccccccccc
Q psy14555         81 DKRAT-----AGELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~~  102 (222)
                      .+|..     ..++++|+||....|..
T Consensus       227 ~nrLg~~~~~~~eik~h~f~~~i~~~~  253 (612)
T KOG0603|consen  227 ENRLGAGPDGVDEIKQHEFFQSIDWNE  253 (612)
T ss_pred             HHHhccCcchhHHHhccchheeeeHhh
Confidence            99964     46899999999877663

>KOG1025|consensus

Probab=99.13  E-value=6.6e-11  Score=104.05  Aligned_cols=87  Identities=25%  Similarity=0.357  Sum_probs=75.2

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~   81 (222)
                      .|||-|.+..+.|+.++|||||||.+||++| |..|+.+  -+...+......+.+...|+..+.++..++.+||..|+.
T Consensus       865 kwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g--i~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~  942 (1177)
T KOG1025|consen  865 KWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG--IPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDAD  942 (1177)
T ss_pred             HHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC--CCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcc
Confidence            4788899999999999999999999999999 9999974  455666666666777888899999999999999999999


Q ss_pred             CCCChhhhhc
Q psy14555         82 KRATAGELLE   91 (222)
Q Consensus        82 ~R~s~~~~l~   91 (222)
                      .||+|+++..
T Consensus       943 ~rp~fkel~~  952 (1177)
T KOG1025|consen  943 SRPTFKELAE  952 (1177)
T ss_pred             cCccHHHHHH
Confidence            9999887643

>KOG1094|consensus

Probab=99.11  E-value=5.8e-11  Score=100.93  Aligned_cols=89  Identities=16%  Similarity=0.317  Sum_probs=69.2

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCChHHHHHHhh-----hccCCCCCCccccHHHHHHHHHh
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT--GKPPFIELGSPQAALYRVG-----FHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~--g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      -|||+|.+..++++.++|+|+||+++||+++  ...||..+.+.........     -...-+..|..++..+.++|.+|
T Consensus       704 RwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~C  783 (807)
T KOG1094|consen  704 RWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRC  783 (807)
T ss_pred             eehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHH
Confidence            4899999999999999999999999999876  7899975433222111111     11222456788899999999999


Q ss_pred             cccCCCCCCChhhhhc
Q psy14555         76 FEKDPDKRATAGELLE   91 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~   91 (222)
                      |..+..+||+++++..
T Consensus       784 w~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  784 WRRESEQRPSFEQLHL  799 (807)
T ss_pred             hchhhhcCCCHHHHHH
Confidence            9999999999998854

>KOG0668|consensus

Probab=99.09  E-value=3e-10  Score=86.67  Aligned_cols=96  Identities=22%  Similarity=0.313  Sum_probs=66.8

Q ss_pred             ceecCc-ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CChHHHHHHhh------------hcc--CCC--------
Q psy14555          3 VIFLTQ-YSVNSSYSPQADIWSLGCTIVEMATGKPPFIEL-GSPQAALYRVG------------FHK--MHP--------   58 (222)
Q Consensus         3 ~y~aPe-~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~-~~~~~~~~~~~------------~~~--~~~--------   58 (222)
                      +|--|| .+-.+.|+.+-|+||+||++..|+..+-||... .+.++......            ...  ..+        
T Consensus       197 yfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~  276 (338)
T KOG0668|consen  197 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGR  276 (338)
T ss_pred             hcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhc
Confidence            344566 344567999999999999999999999998542 22222211100            000  000        


Q ss_pred             ---CCC---------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 ---EIP---------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ---~~~---------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                         ..|         .-.++++.+|+.++|..|-.+|+|+.+++.||||...
T Consensus       277 ~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  277 HSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             cccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence               011         1247999999999999999999999999999999754

>KOG0195|consensus

Probab=99.08  E-value=2.1e-10  Score=89.60  Aligned_cols=89  Identities=20%  Similarity=0.408  Sum_probs=74.8

Q ss_pred             CcceecCcccCCCCCC---chhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYS---PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~---~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      .+.||+||.+....-+   .++|+|||.+++|||-++..||.... +.+.-.++...+.....|+.++..+..|+.-|++
T Consensus       349 ~pawmspealqrkped~n~raadmwsfaillwel~trevpfadls-pmecgmkialeglrv~ippgis~hm~klm~icmn  427 (448)
T KOG0195|consen  349 SPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLS-PMECGMKIALEGLRVHIPPGISRHMNKLMNICMN  427 (448)
T ss_pred             CcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCC-chhhhhhhhhccccccCCCCccHHHHHHHHHHhc
Confidence            3679999977766543   58999999999999999999998753 4455555667788888899999999999999999


Q ss_pred             cCCCCCCChhhhh
Q psy14555         78 KDPDKRATAGELL   90 (222)
Q Consensus        78 ~~p~~R~s~~~~l   90 (222)
                      .||.+||.+..++
T Consensus       428 edpgkrpkfdmiv  440 (448)
T KOG0195|consen  428 EDPGKRPKFDMIV  440 (448)
T ss_pred             CCCCcCCCcceeh
Confidence            9999999998764

>KOG0662|consensus

Probab=99.02  E-value=7.5e-10  Score=81.59  Aligned_cols=96  Identities=24%  Similarity=0.458  Sum_probs=65.7

Q ss_pred             cceecCcccCCC-CCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHh---hhccCC---------------CCCC
Q psy14555          2 NVIFLTQYSVNS-SYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRV---GFHKMH---------------PEIP   61 (222)
Q Consensus         2 ~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~---~~~~~~---------------~~~~   61 (222)
                      .-|-.|.++.+. -|+.+.|+||.|||+.|+.. |+|.|++. .......++   .-....               +.+|
T Consensus       165 lwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~-dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~yp  243 (292)
T KOG0662|consen  165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYP  243 (292)
T ss_pred             eeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC-cHHHHHHHHHHHhCCCccccCCccccCCCCcccCCcc
Confidence            345555555544 49999999999999999987 88888763 333332222   111111               0111


Q ss_pred             ---------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         62 ---------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        62 ---------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                               +.++..-++++.++|.-+|..|.+++.+++||||...
T Consensus       244 attswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  244 ATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             ccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence                     1234456799999999999999999999999999753

>KOG0576|consensus

Probab=99.00  E-value=2.6e-10  Score=98.21  Aligned_cols=97  Identities=27%  Similarity=0.475  Sum_probs=75.4

Q ss_pred             CcceecCc---ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc---CCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQ---YSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK---MHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe---~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~   74 (222)
                      |++|||||   +-..++|+..||+|++|+...|+---.+|..... +....+......   ....-+..+++-+.+|++.
T Consensus       175 tpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh-pmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~  253 (829)
T KOG0576|consen  175 TPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH-PMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKG  253 (829)
T ss_pred             CccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc-hHHHHHHhhccCCCCCcccCCccchHHHHHHHHH
Confidence            78999999   4567889999999999999999988788864432 233333322222   2233456789999999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.++|++||+++.++.|||....
T Consensus       254 altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  254 ALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             HhcCCCccCCChhhheeceeeccc
Confidence            999999999999999999998753

>KOG0664|consensus

Probab=98.98  E-value=5.1e-10  Score=87.48  Aligned_cols=99  Identities=21%  Similarity=0.365  Sum_probs=68.1

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh----------------------hcc-C
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG----------------------FHK-M   56 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~----------------------~~~-~   56 (222)
                      |.+|-|||.+.+ +.|+.++||||+|||+.||+.++..|..-+.....-....                      ... .
T Consensus       220 TQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k  299 (449)
T KOG0664|consen  220 TQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLR  299 (449)
T ss_pred             HHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCC
Confidence            568999996654 5699999999999999999999888864222111111100                      000 1


Q ss_pred             CCCCC--------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         57 HPEIP--------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        57 ~~~~~--------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      .+..+        ..-..++..++..++..+|.+|.+.++++.|+++....
T Consensus       300 ~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  300 APDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR  350 (449)
T ss_pred             CCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence            11111        12234567888899999999999999999999987643

>KOG0590|consensus

Probab=98.95  E-value=1e-10  Score=102.99  Aligned_cols=97  Identities=20%  Similarity=0.386  Sum_probs=74.4

Q ss_pred             cceecCcccCCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCCChHHHH-HHh-----hhccCCCCCCccccHHHHHHHHH
Q psy14555          2 NVIFLTQYSVNSSYSP-QADIWSLGCTIVEMATGKPPFIELGSPQAAL-YRV-----GFHKMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~-~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~li~~   74 (222)
                      .+|+|||++.+..|.+ .+||||+|+++..|.+|+.||.......... ...     ............++...+.+|.+
T Consensus       488 ~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~  567 (601)
T KOG0590|consen  488 DPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYR  567 (601)
T ss_pred             CcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHH
Confidence            5899999999999987 7999999999999999999986322221111 111     01111123345678899999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|+.+|.+|.++++|++.+||+..
T Consensus       568 ~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  568 MLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HccCChhheecHHHHhhChHhhhc
Confidence            999999999999999999999864

>KOG1167|consensus

Probab=98.94  E-value=4.5e-10  Score=91.94  Aligned_cols=97  Identities=22%  Similarity=0.400  Sum_probs=67.5

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChH---HHH-HH-------------------------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQ---AAL-YR-------------------------   50 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~---~~~-~~-------------------------   50 (222)
                      |+.|-|||++..- .-++++|+||.|||+.-+++++.||.......   .++ ..                         
T Consensus       240 T~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~  319 (418)
T KOG1167|consen  240 TPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIP  319 (418)
T ss_pred             CCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecccccc
Confidence            7889999976644 46789999999999999999999985211100   000 00                         


Q ss_pred             ------hhhccC-------------CCC-CCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         51 ------VGFHKM-------------HPE-IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        51 ------~~~~~~-------------~~~-~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                            ......             ... .-...+..+.+|+.+||..+|.+|.+++++|.||||..
T Consensus       320 ~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  320 TIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             ccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence                  000000             000 01234557899999999999999999999999999974

>KOG1187|consensus

Probab=98.94  E-value=9.4e-10  Score=91.58  Aligned_cols=91  Identities=19%  Similarity=0.389  Sum_probs=62.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-ChHH--HHHH--hh-----hccCCCCCC-cc-----c
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELG-SPQA--ALYR--VG-----FHKMHPEIP-AE-----L   64 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~-~~~~--~~~~--~~-----~~~~~~~~~-~~-----~   64 (222)
                      |..|+|||+...+..+.++|||||||++.|+++|+.|..... ....  ..+.  ..     .....+... ..     .
T Consensus       241 t~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~  320 (361)
T KOG1187|consen  241 TFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKE  320 (361)
T ss_pred             CCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHH
Confidence            678999999999999999999999999999999998875321 0111  1111  00     111122221 11     2


Q ss_pred             cHHHHHHHHHhcccCCCCCCChhhhhc
Q psy14555         65 SDKAKQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        65 ~~~~~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      -..+..+..+|+..+|..||++.+++.
T Consensus       321 ~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  321 VKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            233556778999999999999999754

>KOG1033|consensus

Probab=98.86  E-value=1.3e-09  Score=91.78  Aligned_cols=90  Identities=20%  Similarity=0.283  Sum_probs=62.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..||+||.+.+..|+.++||||+|++++|++. -..+|.    ....+........++...... +....|+..++...
T Consensus       425 t~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r~~t~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~  499 (516)
T KOG1033|consen  425 TLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----RIATLTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPS  499 (516)
T ss_pred             ccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----HHHhhhhhhcCCCChHHhhcC-cHHHHHHHHhcCCC
Confidence            678999999999999999999999999999997 222221    111122221222222233333 34468999999999


Q ss_pred             CCCCCChhhhhcCccc
Q psy14555         80 PDKRATAGELLEDPFL   95 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~   95 (222)
                      |.+||++.+.-.|.|.
T Consensus       500 p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  500 PEERPSAIEVALHEFL  515 (516)
T ss_pred             cccCchHHHHhhhhhc
Confidence            9999988777767664

>KOG0984|consensus

Probab=98.77  E-value=5e-09  Score=78.87  Aligned_cols=58  Identities=31%  Similarity=0.574  Sum_probs=42.6

Q ss_pred             ceecCccc----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC
Q psy14555          3 VIFLTQYS----VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP   61 (222)
Q Consensus         3 ~y~aPe~~----~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~   61 (222)
                      +|||||.+    ...+|+-++||||+|+.+.||.+++.||.....+-+.+..+ ....++.+|
T Consensus       213 pYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqv-Veep~P~Lp  274 (282)
T KOG0984|consen  213 PYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQV-VEEPSPQLP  274 (282)
T ss_pred             ccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHH-hcCCCCCCc
Confidence            79999944    45589999999999999999999999998655544444333 333344444

>KOG0606|consensus

Probab=98.70  E-value=2.3e-08  Score=90.50  Aligned_cols=105  Identities=25%  Similarity=0.382  Sum_probs=83.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+-|.+||...+..++..+|+|++|++++|.++|.+||..  ...+.++......  .-+..+...+..+.+++.+++..
T Consensus       998 t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na--~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~ 1075 (1205)
T KOG0606|consen  998 TPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA--ETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTE 1075 (1205)
T ss_pred             CCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC--cchhhhhhccccCCCCCCCCccccChhhhhhhhhhhcc
Confidence            6789999999999999999999999999999999999963  3344444432222  11233466789999999999999


Q ss_pred             CCCCCCChh---hhhcCccccccccccCCCCC
Q psy14555         79 DPDKRATAG---ELLEDPFLADLTATRSSSSG  107 (222)
Q Consensus        79 ~p~~R~s~~---~~l~h~~~~~~~~~~~~~~~  107 (222)
                      +|.+|..+.   +...|+||+...|.......
T Consensus      1076 ~~~qr~~a~~~~e~k~~~~~~~~~~~~l~~q~ 1107 (1205)
T KOG0606|consen 1076 EPTQRLGAKGAAEVKGHPFFQDVDWENLALQK 1107 (1205)
T ss_pred             CchhccCcccccccccCCccCCCCcccccccc
Confidence            999998776   88899999998877655443

>KOG4250|consensus

Probab=98.57  E-value=3.4e-08  Score=85.88  Aligned_cols=44  Identities=34%  Similarity=0.689  Sum_probs=38.3

Q ss_pred             CcceecCcccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh
Q psy14555          1 MNVIFLTQYSV-NSSYSPQADIWSLGCTIVEMATGKPPFIELGSP   44 (222)
Q Consensus         1 t~~y~aPe~~~-~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~   44 (222)
                      |.-|++||... .+.|+..||.||+||++|++.||..||.....+
T Consensus       186 T~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p  230 (732)
T KOG4250|consen  186 TEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP  230 (732)
T ss_pred             chhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence            67799999877 589999999999999999999999999654433

>KOG1240|consensus

Probab=98.44  E-value=8.5e-08  Score=87.37  Aligned_cols=86  Identities=27%  Similarity=0.449  Sum_probs=59.4

Q ss_pred             cceecCcccCCCC-----------CCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhcc-CCCC-C-CccccH
Q psy14555          2 NVIFLTQYSVNSS-----------YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHK-MHPE-I-PAELSD   66 (222)
Q Consensus         2 ~~y~aPe~~~~~~-----------y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~   66 (222)
                      ++|+|||.+....           .+++-||+|+||+++||++ |+|||.     ...++...... ..+. . ..--+.
T Consensus       191 tCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~-----LSQL~aYr~~~~~~~e~~Le~Ied~  265 (1431)
T KOG1240|consen  191 TCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT-----LSQLLAYRSGNADDPEQLLEKIEDV  265 (1431)
T ss_pred             eeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-----HHHHHhHhccCccCHHHHHHhCcCc
Confidence            5899999554422           5788999999999999999 899983     12222221111 0000 0 011244


Q ss_pred             HHHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         67 KAKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        67 ~~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      ..++++..|++.+|++|.+|++.++.
T Consensus       266 ~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  266 SLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             cHHHHHHHHHccCchhccCHHHHHHh
Confidence            67899999999999999999998874

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.41  E-value=4.2e-07  Score=69.94  Aligned_cols=55  Identities=25%  Similarity=0.353  Sum_probs=41.6

Q ss_pred             cceecCccc-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC
Q psy14555          2 NVIFLTQYS-VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM   56 (222)
Q Consensus         2 ~~y~aPe~~-~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~   56 (222)
                      ..|++||.. ....++.++|+|++|+++++|++|+.||.........+......+.
T Consensus       163 ~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      163 PFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             CCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            468999987 7778888999999999999999999999652344444444444443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1023|consensus

Probab=98.24  E-value=1.7e-06  Score=73.96  Aligned_cols=90  Identities=22%  Similarity=0.356  Sum_probs=62.7

Q ss_pred             cceecCcccCCCC-------CCchhhHHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHhhhcc---CCCCCC--ccccH
Q psy14555          2 NVIFLTQYSVNSS-------YSPQADIWSLGCTIVEMATGKPPFIELGS---PQAALYRVGFHK---MHPEIP--AELSD   66 (222)
Q Consensus         2 ~~y~aPe~~~~~~-------y~~~~DiWS~Gvil~ell~g~~Pf~~~~~---~~~~~~~~~~~~---~~~~~~--~~~~~   66 (222)
                      .+|.|||.+....       -+.+.|+||+|++++|+++...||.....   +.+.+.......   ..|..+  ....+
T Consensus       115 ~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~  194 (484)
T KOG1023|consen  115 LLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPP  194 (484)
T ss_pred             HhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcch
Confidence            3688999877753       35579999999999999999999974222   122333322212   222222  13455


Q ss_pred             HHHHHHHHhcccCCCCCCChhhhhc
Q psy14555         67 KAKQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        67 ~~~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      ....++..||..+|..||+++++..
T Consensus       195 ~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  195 ELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             HHHHHHHHhcccChhhCccHHHHHh
Confidence            7889999999999999999988754

>KOG2052|consensus

Probab=98.20  E-value=1.6e-06  Score=72.20  Aligned_cols=91  Identities=19%  Similarity=0.371  Sum_probs=59.0

Q ss_pred             CcceecCcccCCCC----CC--chhhHHHHHHHHHHHHhC----------CCCCCCCCC---hHHHHHHh-hhccCCCCC
Q psy14555          1 MNVIFLTQYSVNSS----YS--PQADIWSLGCTIVEMATG----------KPPFIELGS---PQAALYRV-GFHKMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~~~----y~--~~~DiWS~Gvil~ell~g----------~~Pf~~~~~---~~~~~~~~-~~~~~~~~~   60 (222)
                      |--|||||++-..-    +.  .-+||||||.|+||++.+          ++||...-+   .-+.+..+ ......|..
T Consensus       383 TKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~i  462 (513)
T KOG2052|consen  383 TKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNI  462 (513)
T ss_pred             eeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCC
Confidence            55699999776543    22  359999999999999862          478864322   22333222 233444444


Q ss_pred             Cccc-----cHHHHHHHHHhcccCCCCCCChhhhhc
Q psy14555         61 PAEL-----SDKAKQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        61 ~~~~-----~~~~~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      |..+     -..+..+|+-||..+|..|.|+-.+.+
T Consensus       463 pnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  463 PNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             CcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence            4322     134567899999999999999866543

>KOG0590|consensus

Probab=98.18  E-value=3.9e-07  Score=80.65  Aligned_cols=97  Identities=20%  Similarity=0.272  Sum_probs=75.6

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc--cCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH--KMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||...+. ..++..|+||+|+++..+++|..|+................  ......|..++....+++.+++.
T Consensus       192 s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~  271 (601)
T KOG0590|consen  192 SPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILK  271 (601)
T ss_pred             CCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhccccccc
Confidence            5789999988885 55789999999999999999999985432222222222111  22345567889999999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+|..|.+.+++..++|+..
T Consensus       272 ~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  272 ENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             CCchhccccccccccccccc
Confidence            99999999999999999987

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.11  E-value=1.6e-05  Score=63.76  Aligned_cols=97  Identities=24%  Similarity=0.368  Sum_probs=68.6

Q ss_pred             CcceecCcccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHhhh-ccCC---CCCCccc----cHH
Q psy14555          1 MNVIFLTQYSVN---SSYSPQADIWSLGCTIVEMATGKPPFIELGS--PQAALYRVGF-HKMH---PEIPAEL----SDK   67 (222)
Q Consensus         1 t~~y~aPe~~~~---~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~--~~~~~~~~~~-~~~~---~~~~~~~----~~~   67 (222)
                      |..|++||.+.+   ..++...|+||+|+++++++.|..||.....  .......... ....   .......    ...
T Consensus       171 t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (384)
T COG0515         171 TPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKA  250 (384)
T ss_pred             ccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHH
Confidence            578999998887   6889999999999999999999999864332  0122222211 1111   1111111    257


Q ss_pred             HHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         68 AKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        68 ~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      ..+++.+++..+|..|.+......+++...
T Consensus       251 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         251 ASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             HHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence            889999999999999999988888766544

>KOG1345|consensus

Probab=98.02  E-value=1.9e-06  Score=67.68  Aligned_cols=97  Identities=19%  Similarity=0.219  Sum_probs=65.1

Q ss_pred             CcceecCcccC---CCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH---HHHh--hhccCCCCCCccccHHHHH
Q psy14555          1 MNVIFLTQYSV---NSS--YSPQADIWSLGCTIVEMATGKPPFIELGSPQAA---LYRV--GFHKMHPEIPAELSDKAKQ   70 (222)
Q Consensus         1 t~~y~aPe~~~---~~~--y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~   70 (222)
                      +..|-+||+..   .+.  .++..|+|.||+++|.+++|.+||......+..   ...+  +.....|....-+++.+..
T Consensus       183 ~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r  262 (378)
T KOG1345|consen  183 VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALR  262 (378)
T ss_pred             hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHH
Confidence            34688888433   333  368899999999999999999999621111111   1111  2222223333557899999


Q ss_pred             HHHHhcccCCCCC---CChhhhhcCccccc
Q psy14555         71 FILRCFEKDPDKR---ATAGELLEDPFLAD   97 (222)
Q Consensus        71 li~~~l~~~p~~R---~s~~~~l~h~~~~~   97 (222)
                      +.++-|..++.+|   .+++..+...|...
T Consensus       263 ~Fkk~lt~~~~drcki~~~kk~rk~~w~E~  292 (378)
T KOG1345|consen  263 LFKKSLTPRFKDRCKIWTAKKMRKCLWKEK  292 (378)
T ss_pred             HHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence            9999999999999   56666777777654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.96  E-value=1.2e-06  Score=70.33  Aligned_cols=63  Identities=22%  Similarity=0.433  Sum_probs=41.4

Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCCCCC
Q psy14555         14 SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKR   83 (222)
Q Consensus        14 ~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R   83 (222)
                      .|+.+.|.|++|+++|.+.||..||.....  ........    ..+. .+++..+.||.++|..+|.+|
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~--~~~~~~~f----~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLSSP--EADPEWDF----SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCCGG--GSTSGGGG----TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCCCc--cccccccc----hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            588999999999999999999999963211  11000011    1222 689999999999999999887

>KOG4158|consensus

Probab=97.94  E-value=1.4e-05  Score=66.19  Aligned_cols=86  Identities=20%  Similarity=0.371  Sum_probs=61.7

Q ss_pred             cceecCcccCCCC-----CC-chhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          2 NVIFLTQYSVNSS-----YS-PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         2 ~~y~aPe~~~~~~-----y~-~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      +.-||||+.....     .+ .++|.|++|.+.||++...-||...+...-. .+.-.....+..|..+++.+.+++..+
T Consensus       415 a~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~-~r~Yqe~qLPalp~~vpp~~rqlV~~l  493 (598)
T KOG4158|consen  415 AKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD-TRTYQESQLPALPSRVPPVARQLVFDL  493 (598)
T ss_pred             ceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec-hhhhhhhhCCCCcccCChHHHHHHHHH
Confidence            3568898654332     12 4899999999999999999999753321111 111123344667888999999999999


Q ss_pred             cccCCCCCCChhh
Q psy14555         76 FEKDPDKRATAGE   88 (222)
Q Consensus        76 l~~~p~~R~s~~~   88 (222)
                      |+.+|++|++..-
T Consensus       494 L~r~pskRvsp~i  506 (598)
T KOG4158|consen  494 LKRDPSKRVSPNI  506 (598)
T ss_pred             hcCCccccCCccH
Confidence            9999999988643

>KOG3653|consensus

Probab=97.85  E-value=2.6e-05  Score=65.60  Aligned_cols=87  Identities=22%  Similarity=0.353  Sum_probs=55.5

Q ss_pred             CcceecCcccCCCC-CC-----chhhHHHHHHHHHHHHhCCC------------CCC-CC--CChHHHHHH-hhhccCCC
Q psy14555          1 MNVIFLTQYSVNSS-YS-----PQADIWSLGCTIVEMATGKP------------PFI-EL--GSPQAALYR-VGFHKMHP   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~-y~-----~~~DiWS~Gvil~ell~g~~------------Pf~-~~--~~~~~~~~~-~~~~~~~~   58 (222)
                      |.-|||||++.+.- +.     ...||||+|.|+||++++..            ||. +.  .+....+.. +...+.+|
T Consensus       381 T~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP  460 (534)
T KOG3653|consen  381 TRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRP  460 (534)
T ss_pred             hhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCC
Confidence            67899999876542 22     36999999999999998532            221 11  111122222 22334444


Q ss_pred             CCCccc-----cHHHHHHHHHhcccCCCCCCChh
Q psy14555         59 EIPAEL-----SDKAKQFILRCFEKDPDKRATAG   87 (222)
Q Consensus        59 ~~~~~~-----~~~~~~li~~~l~~~p~~R~s~~   87 (222)
                      .+|..+     ...+.+.+.-||-.||..|.|+.
T Consensus       461 ~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  461 KIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             CChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            444322     34567889999999999999874

>KOG2137|consensus

Probab=96.96  E-value=0.0002  Score=63.06  Aligned_cols=96  Identities=20%  Similarity=0.317  Sum_probs=70.5

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhh-hccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      -|.|||++.+..-+.++|++|+||.+|-+.. |+.-+...+.....-.... ...........++.+..+-+.+++..++
T Consensus       174 ~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~  253 (700)
T KOG2137|consen  174 NFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDS  253 (700)
T ss_pred             ccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCc
Confidence            5899999999888999999999999998884 6555543222222211111 1111222336788999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      ..||++..+...+||.+.
T Consensus       254 ~~rp~~~~l~~~~ff~D~  271 (700)
T KOG2137|consen  254 AVRPTLDLLLSIPFFSDP  271 (700)
T ss_pred             ccCcchhhhhcccccCCc
Confidence            999999999999999864

>KOG1266|consensus

Probab=96.60  E-value=0.0014  Score=53.33  Aligned_cols=88  Identities=19%  Similarity=0.300  Sum_probs=59.2

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH----HHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ----AALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      +.|.+||+-....-+.++|||++|....+|..+..--.. +...    ..+... .....       ...-+.++.+|++
T Consensus       246 ~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tn-seS~~~~ee~ia~~-i~~le-------n~lqr~~i~kcl~  316 (458)
T KOG1266|consen  246 PGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTN-SESKVEVEENIANV-IIGLE-------NGLQRGSITKCLE  316 (458)
T ss_pred             CccccCCcCcccccccchhhhhhhHHHHHHHHheeccCC-Ccceeehhhhhhhh-eeecc-------CccccCcCccccc
Confidence            467788887777888999999999999999887543210 1111    111111 11111       1222567889999


Q ss_pred             cCCCCCCChhhhhcCcccccc
Q psy14555         78 KDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..|..||++..++.||.+-.+
T Consensus       317 ~eP~~rp~ar~llfHpllfeV  337 (458)
T KOG1266|consen  317 GEPNGRPDARLLLFHPLLFEV  337 (458)
T ss_pred             CCCCCCcchhhhhcCceeeec
Confidence            999999999999999975443

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=95.27  E-value=0.037  Score=33.95  Aligned_cols=54  Identities=15%  Similarity=0.147  Sum_probs=41.8

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++.++.+++..++..+....   ......+.++.+++.+|.|++|..+....+.
T Consensus        11 ~d~~G~i~~~el~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~   64 (66)
T PF13499_consen   11 KDGDGYISKEELRRALKHLGRDM---SDEESDEMIDQIFREFDTDGDGRISFDEFLN   64 (66)
T ss_dssp             TTSSSEEEHHHHHHHHHHTTSHS---THHHHHHHHHHHHHHHTTTSSSSEEHHHHHH
T ss_pred             CCccCCCCHHHHHHHHHHhcccc---cHHHHHHHHHHHHHHhCCCCcCCCcHHHHhc
Confidence            36899999998888555554332   3567788999999999999999888776653

...

>KOG0601|consensus

Probab=94.73  E-value=0.02  Score=49.78  Aligned_cols=93  Identities=23%  Similarity=0.198  Sum_probs=63.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|++||. ..+.|+.+.|++++|-+..+...+..+..... ..+..+ +...  ....+-...+......+..++..+|
T Consensus       292 ~~Y~~ke~-~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-r~~~--ip~e~~~~~s~~l~~~~~~~~d~~~  367 (524)
T KOG0601|consen  292 CIYAAKEL-LNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-RQGY--IPLEFCEGGSSSLRSVTSQMLDEDP  367 (524)
T ss_pred             ceEeChhh-hccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc-cccc--CchhhhcCcchhhhhHHHHhcCcch
Confidence            35888885 56789999999999999999888766543211 111111 1111  1222223345555668889999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      ..|++++.+++|+++...
T Consensus       368 ~~~~~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  368 RLRLTAQILTALNVIHSK  385 (524)
T ss_pred             hhhhHHHHHhccccccch
Confidence            999999999999998753

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=94.53  E-value=0.031  Score=32.83  Aligned_cols=50  Identities=12%  Similarity=0.121  Sum_probs=37.4

Q ss_pred             CcccCHHHHHHHHHHHHHhhhcchhh-HHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        163 DCLLSKAHLEILMQGMRDNIAEQQKS-CIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       163 ~~~ls~~~i~~l~~~~~~~~~~~~~~-~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      .+.++.+++..   .+....    .. .-.++++.|+..+|.|++|.......+..++
T Consensus         2 ~G~i~~~~~~~---~l~~~g----~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~   52 (54)
T PF13833_consen    2 DGKITREEFRR---ALSKLG----IKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ   52 (54)
T ss_dssp             SSEEEHHHHHH---HHHHTT----SSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred             cCEECHHHHHH---HHHHhC----CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            56788887777   442221    12 4577799999999999999999988887665

...

>KOG1093|consensus

Probab=94.24  E-value=0.033  Score=48.42  Aligned_cols=80  Identities=23%  Similarity=0.306  Sum_probs=51.9

Q ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCC----------CCccccHHHHHHHHHhcccCCCCCC
Q psy14555         16 SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPE----------IPAELSDKAKQFILRCFEKDPDKRA   84 (222)
Q Consensus        16 ~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~R~   84 (222)
                      ++++||||+|.++.++.-|..-+......  ...... .....+.          .-..++.....+.++|+...|+.||
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s--~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~  186 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTES--EYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRP  186 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHH--HHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCcccccccc
Confidence            36999999999999999997766532211  111111 1111110          0112355566788899999999999


Q ss_pred             ChhhhhcCccccc
Q psy14555         85 TAGELLEDPFLAD   97 (222)
Q Consensus        85 s~~~~l~h~~~~~   97 (222)
                      ...+++.++-|..
T Consensus       187 l~~~~~k~~i~~e  199 (725)
T KOG1093|consen  187 LPMELSKRCSFTE  199 (725)
T ss_pred             chhHHhcCccHHH
Confidence            8888888877654

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=94.16  E-value=0.26  Score=32.49  Aligned_cols=56  Identities=5%  Similarity=-0.003  Sum_probs=42.7

Q ss_pred             HhhhcccCCcccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +.++..++.+.++.++++.++.. +.+++...      .+++.+++.+|.|+.|...+..++.
T Consensus        15 ~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~------~~v~~mi~~~D~d~DG~I~F~EF~~   71 (89)
T cd05022          15 HKASVKGGKESLTASEFQELLTQQLPHLLKDV------EGLEEKMKNLDVNQDSKLSFEEFWE   71 (89)
T ss_pred             HHHhCCCCCCeECHHHHHHHHHHHhhhhccCH------HHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            33443268889999999998887 66665411      7899999999999999988877643

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=93.73  E-value=0.21  Score=33.19  Aligned_cols=58  Identities=16%  Similarity=0.135  Sum_probs=40.3

Q ss_pred             HhhhcccCCc-ccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        155 KCIQRDVDDC-LLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       155 ~~~~~~~~~~-~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +.++..++++ .+|.++++.++.. +.+.+..   .....+++++++++|.|++|....+.++
T Consensus        17 ~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~---~~~~~~v~~i~~elD~n~dG~Idf~EF~   76 (93)
T cd05026          17 HNYSGKEGDRYKLSKGELKELLQRELTDFLSS---QKDPMLVDKIMNDLDSNKDNEVDFNEFV   76 (93)
T ss_pred             HHHHccCCCCCEECHHHHHHHHHHHhHHhccc---ccCHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            4556556887 5999999886655 3333221   1245689999999999999977666554

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>KOG1164|consensus

Probab=93.56  E-value=0.32  Score=39.99  Aligned_cols=92  Identities=11%  Similarity=0.029  Sum_probs=61.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH--HHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA--LYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |.-|.++..-.+...+..-|+||++-++.+++.|..||.........  .................+.....+...+-..
T Consensus       200 T~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (322)
T KOG1164|consen  200 TLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSL  279 (322)
T ss_pred             ccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhcc
Confidence            56677777778888899999999999999999999999654332121  1111111111112334566777777777778


Q ss_pred             CCCCCCChhhhhcC
Q psy14555         79 DPDKRATAGELLED   92 (222)
Q Consensus        79 ~p~~R~s~~~~l~h   92 (222)
                      +...+|....+...
T Consensus       280 ~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  280 DYEDKPDYEKLAEL  293 (322)
T ss_pred             CCcCCCCHHHHHHH
Confidence            88889987666543

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=92.78  E-value=0.53  Score=30.83  Aligned_cols=67  Identities=15%  Similarity=0.143  Sum_probs=45.1

Q ss_pred             HHHHHHHhhhcccCCcccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        149 ICQVWLKCIQRDVDDCLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       149 ~~~~~~~~~~~~~~~~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +...+.+.-......+.++.+++..++.. +...+.   .....++++.++..+|.|+.|...++.++..+
T Consensus        10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t---~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~   77 (88)
T cd05030          10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLK---KEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLV   77 (88)
T ss_pred             HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhc---cCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence            33344333334457889999999987752 322221   12337889999999999999998888776554

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=92.30  E-value=0.58  Score=30.72  Aligned_cols=58  Identities=12%  Similarity=0.101  Sum_probs=40.5

Q ss_pred             HhhhcccCCc-ccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        155 KCIQRDVDDC-LLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       155 ~~~~~~~~~~-~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +.++..++++ .++.++++.++.. +++++.   ...-+.+++.+++++|.|+.|-..++..+
T Consensus        15 ~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg---~~~~~~~v~~~i~~~D~n~dG~v~f~eF~   74 (88)
T cd05027          15 HQYSGREGDKHKLKKSELKELINNELSHFLE---EIKEQEVVDKVMETLDSDGDGECDFQEFM   74 (88)
T ss_pred             HHhcccCCCcCEECHHHHHHHHHHHhHHHhc---CCCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            4444446788 5999999997765 233332   12235679999999999999887776654

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=92.01  E-value=0.79  Score=30.14  Aligned_cols=54  Identities=13%  Similarity=0.062  Sum_probs=38.9

Q ss_pred             ccCCc-ccCHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDC-LLSKAHLEILMQGMR-DNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~-~ls~~~i~~l~~~~~-~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++ .||.++++.++.... .++.   ......+++++++++|.|+.|....+..+.
T Consensus        21 ~dg~~~~Ls~~Elk~ll~~e~~~~~~---~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~   76 (89)
T cd05023          21 KDGDSYQLSKTEFLSFMNTELASFTK---NQKDPGVLDRMMKKLDLNSDGQLDFQEFLN   76 (89)
T ss_pred             cCCCcCeECHHHHHHHHHHhhhHhhc---CCCCHHHHHHHHHHcCCCCCCcCcHHHHHH
Confidence            34554 899999998777653 3332   223467899999999999999888777653

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=91.87  E-value=0.73  Score=30.24  Aligned_cols=57  Identities=18%  Similarity=0.110  Sum_probs=38.7

Q ss_pred             HhhhcccC-CcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        155 KCIQRDVD-DCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       155 ~~~~~~~~-~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ..++..++ .+.++.++++.++...... .   .+.-.++++++++++|.|+.|-..++.++
T Consensus        17 ~~y~~~~~~~g~Is~~EL~~~l~~~~~l-g---~k~t~~ev~~m~~~~D~d~dG~Idf~EFv   74 (88)
T cd05029          17 HKYSGREGDKNTLSKKELKELIQKELTI-G---SKLQDAEIAKLMEDLDRNKDQEVNFQEYV   74 (88)
T ss_pred             HHHHccCCCCCEECHHHHHHHHHHHHhc-C---CCCCHHHHHHHHHHhcCCCCCCCcHHHHH
Confidence            34444334 8899999888855332111 1   12456789999999999999887776654

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=91.39  E-value=0.13  Score=26.10  Aligned_cols=26  Identities=8%  Similarity=0.006  Sum_probs=22.4

Q ss_pred             HHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        193 KIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       193 ~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +++++|+..|.|++|....+.+..++
T Consensus         1 E~~~~F~~~D~d~dG~I~~~Ef~~~~   26 (29)
T PF00036_consen    1 ELKEAFREFDKDGDGKIDFEEFKEMM   26 (29)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHH
Confidence            47889999999999999988877654

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=89.38  E-value=1.9  Score=28.28  Aligned_cols=58  Identities=17%  Similarity=0.138  Sum_probs=39.7

Q ss_pred             HhhhcccCCc-ccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        155 KCIQRDVDDC-LLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       155 ~~~~~~~~~~-~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +.++..++++ .|+.++++.++.. +...+.   ...-++++++++.++|.|++|...++..+
T Consensus        16 ~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~---~~~s~~~v~~i~~~~D~d~~G~I~f~eF~   75 (92)
T cd05025          16 HAHSGKEGDKYKLSKKELKDLLQTELSDFLD---AQKDADAVDKIMKELDENGDGEVDFQEFV   75 (92)
T ss_pred             HHHhcccCCCCeECHHHHHHHHHHHHHHHcc---CCCCHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            4554346888 5999999986654 333222   12346789999999999999876665554

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=89.07  E-value=0.35  Score=35.85  Aligned_cols=28  Identities=39%  Similarity=0.643  Sum_probs=25.4

Q ss_pred             HHHHHHHHHhcccCCCCCCChhhhhcCc
Q psy14555         66 DKAKQFILRCFEKDPDKRATAGELLEDP   93 (222)
Q Consensus        66 ~~~~~li~~~l~~~p~~R~s~~~~l~h~   93 (222)
                      ....+++.+|+..+|.+||++.++++|+
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            6778999999999999999999998874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10

Probab=89.03  E-value=2.2  Score=28.22  Aligned_cols=51  Identities=10%  Similarity=0.094  Sum_probs=39.2

Q ss_pred             CCcccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        162 DDCLLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       162 ~~~~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ....|++.+++.|+..- ..++..   ..-...++.+|+.||.|+.|-..++..+
T Consensus        20 ~~~tLsk~Elk~Ll~~Elp~~l~~---~~d~~~vd~im~~LD~n~Dg~vdF~EF~   71 (91)
T cd05024          20 EKNYLNRDDLQKLMEKEFSEFLKN---QNDPMAVDKIMKDLDDCRDGKVGFQSFF   71 (91)
T ss_pred             CCCcCCHHHHHHHHHHHhHHHHcC---CCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            34589999999988644 555552   2246679999999999999998888765

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>KOG0044|consensus

Probab=88.94  E-value=1.1  Score=34.05  Aligned_cols=60  Identities=8%  Similarity=0.065  Sum_probs=51.6

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhc----chhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAE----QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~----~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      .+++|.++++++-.++.+..+-...    .+.+..++-++.++..+|.|+.|...+..++.|.+
T Consensus       111 ~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~  174 (193)
T KOG0044|consen  111 LDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCK  174 (193)
T ss_pred             CCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhh
Confidence            4799999999999988888777665    45557788899999999999999999999988865

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=88.54  E-value=1.4  Score=29.13  Aligned_cols=59  Identities=10%  Similarity=0.092  Sum_probs=40.0

Q ss_pred             HhhhcccC-CcccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVD-DCLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~-~~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ..++..++ ++.++.+++..++.. +...+.   ...-+++++.++.++|.|+.|...+..++.
T Consensus        15 ~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg---~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~   75 (94)
T cd05031          15 HRYAGKDGDKNTLSRKELKKLMEKELSEFLK---NQKDPMAVDKIMKDLDQNRDGKVNFEEFVS   75 (94)
T ss_pred             HHHhccCCCCCeECHHHHHHHHHHHhHHHhh---ccccHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            34444354 699999988886654 222221   123467899999999999998877776654

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=87.23  E-value=2.3  Score=27.53  Aligned_cols=62  Identities=13%  Similarity=0.151  Sum_probs=42.2

Q ss_pred             HHhhhcc-cCCcccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        154 LKCIQRD-VDDCLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       154 ~~~~~~~-~~~~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +..+++. ++++.++.+++..++.. +.....   .....+++..++..+|.++.|...+...+..+
T Consensus        14 F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~---~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~   77 (88)
T cd00213          14 FHKYSGKEGDKDTLSKKELKELLETELPNFLK---NQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLI   77 (88)
T ss_pred             HHHHhhccCCCCcCcHHHHHHHHHHHhhhhcc---CCCCHHHHHHHHHHhccCCCCcCcHHHHHHHH
Confidence            4566664 68999999988885543 211110   11346789999999999999887777666544

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=86.38  E-value=0.6  Score=22.71  Aligned_cols=21  Identities=10%  Similarity=-0.023  Sum_probs=17.1

Q ss_pred             HHHHHHHcCCCccchhhHHHh
Q psy14555        194 IAQLKQELNFDSVAINQIHFA  214 (222)
Q Consensus       194 i~~l~~~ld~d~~g~~~~~~~  214 (222)
                      |++.|+.+|.|++|..+....
T Consensus         1 l~~~F~~~D~d~DG~is~~E~   21 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEEF   21 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHHH
Confidence            467899999999998776654

...

>smart00027 EH Eps15 homology domain

Probab=84.44  E-value=2.9  Score=27.68  Aligned_cols=53  Identities=9%  Similarity=0.056  Sum_probs=37.5

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      +.++ .++++.++.+++..++.   ..      ..-.+++.+++..+|.+++|...+..++..
T Consensus        17 ~~~D-~d~~G~Is~~el~~~l~---~~------~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~   69 (96)
T smart00027       17 RSLD-KNQDGTVTGAQAKPILL---KS------GLPQTLLAKIWNLADIDNDGELDKDEFALA   69 (96)
T ss_pred             HHhC-CCCCCeEeHHHHHHHHH---Hc------CCCHHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            4444 36899999998888544   32      123567889999999999888777666543

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>KOG0034|consensus

Probab=82.19  E-value=4.2  Score=30.78  Aligned_cols=55  Identities=13%  Similarity=0.091  Sum_probs=42.2

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHh
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFA  214 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~  214 (222)
                      .+++|.++.+++.+.+..+...-.....+.+++-++.++.+.|.|+.|...+...
T Consensus       115 ~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf  169 (187)
T KOG0034|consen  115 LDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEF  169 (187)
T ss_pred             CCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            4799999999888876666554221124688888899999999999998776653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	222
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		9e-30
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-29
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-11
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-11
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-11
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-11
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-11
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-11
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-10
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-10
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-10
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-10
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-10
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-10
4fie_A	423	Full-Length Human Pak4 Length = 423		3e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-10
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-10
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-10
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		6e-10
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		6e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-10
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		8e-10
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-09
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-09
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-08
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		7e-08
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		9e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		1e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-07
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-07
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		4e-07
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		7e-07
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-06
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		3e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-06
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-06
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		3e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		4e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		4e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-06
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		4e-06
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-06
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-06
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-06
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		5e-06
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		5e-06
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		5e-06
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		5e-06
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		5e-06
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		6e-06
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		6e-06
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-06
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		6e-06
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		6e-06
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		6e-06
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		6e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		7e-06
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		7e-06
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		7e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		7e-06
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		7e-06
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		9e-06
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-05
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-05
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-05
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-05
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-05
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		3e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-05
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-05
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-05
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-05
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-05
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-05
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-05
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-05
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-05
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-05
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-05
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-05
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-05
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-05
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-05
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-05
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		3e-05
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		4e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-05
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-05
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		5e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		6e-05
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		7e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		7e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		7e-05
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		8e-05
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		9e-05
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-04
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-04
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-04
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-04
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-04
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-04
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-04
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-04
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-04
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-04
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-04
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-04
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-04
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-04
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-04
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-04
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-04
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-04
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-04
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-04
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-04
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-04
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-04
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		4e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		4e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		5e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		6e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		6e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		6e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		6e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		6e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		6e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		7e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		7e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		7e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		7e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		7e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		7e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		7e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-04
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		7e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		7e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		8e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		8e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		8e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-04
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		8e-04
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		8e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		8e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		8e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		9e-04

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score =  126 bits (317), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 65/82 (79%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 260
Query: 74  RCFEKDPDKRATAGELLEDPFL 95
           +CFE DPDKRA A +LL D FL
Sbjct: 261 KCFEPDPDKRACANDLLVDEFL 282

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 65/82 (79%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK FIL
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 246
Query: 74  RCFEKDPDKRATAGELLEDPFL 95
           +CFE DPDKRA A +LL D FL
Sbjct: 247 KCFEPDPDKRACANDLLVDEFL 268

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P +LS   + F
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGT-PELQNPEKLSAIFRDF 249
Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC E D +KR +A ELL+  FL
Sbjct: 250 LNRCLEMDVEKRGSAKELLQHQFL 273

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P +LS   + F
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGT-PELQNPEKLSAIFRDF 250
Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC E D +KR +A EL++  FL
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFL 274

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P +LS   + F
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGT-PELQNPEKLSAIFRDF 250
Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC E D +KR +A EL++  FL
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFL 274

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P +LS   + F
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGT-PELQNPEKLSAIFRDF 249
Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC + D +KR +A ELL+  FL
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFL 273

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQF 71
           +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +  +   PE+  P +LS   + F
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGT-PELQNPEKLSAIFRDF 249
Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC + D +KR +A ELL+  FL
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFL 273

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV------GFHKMHPEIPAELSDK 67
            Y+  ADIWSLG T +EMA GKPP+ ++  P  A++ +       F K     P   SD 
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPPYADI-HPMRAIFMIPTNPPPTFRK-----PELWSDN 254
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
              F+ +C  K P++RATA +LL+ PF+
Sbjct: 255 FTDFVKQCLVKSPEQRATATQLLQHPFV 282

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 18/91 (19%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---------GFHKMHPEIPAELS 65
           Y P+ DIWSLG  ++EM  G+PP+     P  A+  +           HK+ P +     
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL----- 250
Query: 66  DKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
              K F+ R   +DP +RATA ELL+ PFLA
Sbjct: 251 ---KGFLDRLLVRDPAQRATAAELLKHPFLA 278

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKAKQFI 72
           Y P+ DIWSLG  ++EM  G+PP+     P     ++    + P +    ++S   K F+
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 250
Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
            R   +DP +RATA ELL+ PFLA
Sbjct: 251 DRLLVRDPAQRATAAELLKHPFLA 274

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKAKQFI 72
           Y P+ DIWSLG  ++EM  G+PP+     P     ++    + P +    ++S   K F+
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 259
Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
            R   +DP +RATA ELL+ PFLA
Sbjct: 260 DRLLVRDPAQRATAAELLKHPFLA 283

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKAKQFI 72
           Y P+ DIWSLG  ++EM  G+PP+     P     ++    + P +    ++S   K F+
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 261
Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
            R   +DP +RATA ELL+ PFLA
Sbjct: 262 DRLLVRDPAQRATAAELLKHPFLA 285

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKAKQFI 72
           Y P+ DIWSLG  ++EM  G+PP+     P     ++    + P +    ++S   K F+
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 304
Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
            R   +DP +RATA ELL+ PFLA
Sbjct: 305 DRLLVRDPAQRATAAELLKHPFLA 328

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 4   IFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--- 60
           + + + S +  Y  +AD+WSLG T++EMA  +PP  EL +P   L ++   K  P     
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIA--KSEPPTLAQ 262
Query: 61  PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
           P+  S   K F+ +C EK+ D R T  +LL+ PF+ 
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 18/91 (19%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---------GFHKMHPEIPAELS 65
           Y P+ DIWSLG  ++EM  G+PP+     P  A+  +           HK+ P +     
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL----- 377
Query: 66  DKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
              K F+ R   +DP +RATA ELL+ PFLA
Sbjct: 378 ---KGFLDRLLVRDPAQRATAAELLKHPFLA 405

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 4   IFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--- 60
           + + + S +  Y  +AD+WSLG T++EMA  +PP  EL +P   L ++   K  P     
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIA--KSEPPTLAQ 262
Query: 61  PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
           P+  S   K F+ +C EK+ D R T  +LL+ PF+ 
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 4   IFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--- 60
           + + + S +  Y  +AD+WSLG T++EMA  +PP  EL +P   L ++   K  P     
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIA--KSEPPTLAQ 262
Query: 61  PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA 96
           P+  S   K F+ +C EK+ D R T  +LL+ PF+ 
Sbjct: 263 PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 298

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE---IPAELSDKA 68
           ++ Y  +ADIWSLG T++EMA  +PP  EL +P   L ++   K  P     P++ S + 
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIA--KSDPPTLLTPSKWSVEF 252
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADLTATRS 103
           + F+    +K+P+ R +A +LLE PF++ +T+ ++
Sbjct: 253 RDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKA 287

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE---IPAELSDKA 68
           ++ Y  +ADIWSLG T++EMA  +PP  EL +P   L ++   K  P     P++ S + 
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIA--KSDPPTLLTPSKWSVEF 244
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADLTATRS 103
           + F+    +K+P+ R +A +LLE PF++ +T+ ++
Sbjct: 245 RDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKA 279

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  EL  P   L+ +  +   P +    S   K+F+
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-PPTLEGNYSKPLKEFV 256
Query: 73  LRCFEKDPDKRATAGELLEDPFL 95
             C  K+P  R TA ELL+  F+
Sbjct: 257 EACLNKEPSFRPTAKELLKHKFI 279

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  EL  P   L+ +  +   P +    S   K+F+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-PPTLEGNYSKPLKEFV 236
Query: 73  LRCFEKDPDKRATAGELLEDPFL 95
             C  K+P  R TA ELL+  F+
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFI 259

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  EL  P   L+ +  +   P +    S   K+F+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-PPTLEGNYSKPLKEFV 236
Query: 73  LRCFEKDPDKRATAGELLEDPFL 95
             C  K+P  R TA ELL+  F+
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFI 259

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  EL  P   L+ +  +   P +    S   K+F+
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNN-PPTLEGNYSKPLKEFV 251
Query: 73  LRCFEKDPDKRATAGELLEDPFL 95
             C  K+P  R TA ELL+  F+
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFI 274

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 18/93 (19%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---------GFHKMHPEIPA 62
            S Y+ + DIWSLG  ++EM  G+PP+    SP  A+ R+           HK+ P +  
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNSHKVSPVL-- 271
Query: 63  ELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
                 + F+ R   +DP +RATA ELL+ PFL
Sbjct: 272 ------RDFLERMLVRDPQERATAQELLDHPFL 298

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  ++  P   L+ +  +   P +  + +   K+FI
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDM-HPMRVLFLIPKNN-PPTLVGDFTKSFKEFI 252
Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
             C  KDP  R TA ELL+  F+ 
Sbjct: 253 DACLNKDPSFRPTAKELLKHKFIV 276

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S+Y  +ADIWSLG T +E+A G+PP  +L  P   L+ +      P +  + S   K+F+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDL-HPMRVLFLIP-KNSPPTLEGQHSKPFKEFV 248
Query: 73  LRCFEKDPDKRATAGELLEDPFLADLTATRS 103
             C  KDP  R TA ELL+  F+   T   S
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITRYTKKTS 279

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           + +  S++  ++D+WSLGC    +  G+PPF +  + +  L +V       E+P+ LS +
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPF-DTDTVKNTLNKVVLADY--EMPSFLSIE 238
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSG 107
           AK  I +   ++P  R +   +L+ PF++  ++T+S   G
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---PEIPAEL-SDK 67
            + YS Q+DIWS+G ++VEMA G+ P I  GS   A++ +  + ++   P++P+ + S +
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYP-IGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLE 254
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
            + F+ +C  K+P +RA   +L+   F+    A     +G L   + LN
Sbjct: 255 FQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLN 303

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-LSDKAKQFI 72
            YS ++DIWSLG T++E+A  + P+   G+P   L +V   +  P++PA+  S +   F 
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-VEEPSPQLPADKFSAEFVDFT 247
Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
            +C +K+  +R T  EL++ PF  
Sbjct: 248 SQCLKKNSKERPTYPELMQHPFFT 271

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-LSDKAKQFI 72
            YS ++DIWSLG T++E+A  + P+   G+P   L +V   +  P++PA+  S +   F 
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-VEEPSPQLPADKFSAEFVDFT 291
Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
            +C +K+  +R T  EL++ PF  
Sbjct: 292 SQCLKKNSKERPTYPELMQHPFFT 315

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---PEIP-AELSDK 67
            + YS Q+DIWS+G ++VEMA G+ P      P  A++ +  + ++   P++P A  S +
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYP-----RPPMAIFELLDYIVNEPPPKLPSAVFSLE 234
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKS 119
            + F+ +C  K+P +RA   +L+   F+    A     +G L   + LN  S
Sbjct: 235 FQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPS 286

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA------ELS 65
           +++Y  ++D+WSLG T +EMA G PP  ++  P  AL+ +      P  PA      + S
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPMRALFLI------PRNPAPRLKSKKWS 260
Query: 66  DKAKQFILRCFEKDPDKRATAGELLEDPFLAD 97
            K + FI  C  K+  +R    +L++ PF+ D
Sbjct: 261 KKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKA----- 68
            Y  +ADIWS G T +E+ATG  P+ +   P   +  +      P +   + DK      
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYHKY--PPMKVLMLTLQNDPPSLETGVQDKEMLKKY 260
Query: 69  ----KQFILRCFEKDPDKRATAGELLEDPFL 95
               ++ I  C +KDP+KR TA ELL   F 
Sbjct: 261 GKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK-QFIL 73
           Y  + DIWSLG  ++EM  G+PP+      QA        ++   +P  + D  K   +L
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA------MRRIRDSLPPRVKDLHKVSSVL 271
Query: 74  RCF-----EKDPDKRATAGELLEDPFL 95
           R F      ++P +RATA ELL  PFL
Sbjct: 272 RGFLDLMLVREPSQRATAQELLGHPFL 298

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKA----- 68
            Y  +ADIWS G T +E+ATG  P+ +   P   +  +      P +   + DK      
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYHKY--PPMKVLMLTLQNDPPSLETGVQDKEMLKKY 255
Query: 69  ----KQFILRCFEKDPDKRATAGELLEDPFL 95
               ++ I  C +KDP+KR TA ELL   F 
Sbjct: 256 GKSFRKMISLCLQKDPEKRPTAAELLRHKFF 286

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-LSDKAKQFI 72
            YS ++DIWSLG T +E+A  + P+   G+P   L +V   +  P++PA+  S +   F 
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV-VEEPSPQLPADKFSAEFVDFT 274
Query: 73  LRCFEKDPDKRATAGELLEDPFLA 96
            +C +K+  +R T  EL + PF  
Sbjct: 275 SQCLKKNSKERPTYPELXQHPFFT 298

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFI-----ELGSPQAALYRVGFHKMH---PEIPAE 63
            + YS Q+DIWS+G ++VEMA G+ P       E   P  A++ +  + ++   P++P+ 
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSG 236
Query: 64  L-SDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKS 119
           + S + + F+ +C  K+P +RA   +L+   F+    A     +G L   + LN  S
Sbjct: 237 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQPS 293

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY---RVGFHKMHPEIPAELSDKAKQF 71
           YS   D WS+G     +  G PPF E    ++ L+   + G+++       ++S+ AK F
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYE--ETESKLFEKIKEGYYEFESPFWDDISESAKDF 241
Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTA 100
           I    EKDP++R T  + L  P++   TA
Sbjct: 242 ICHLLEKDPNERYTCEKALSHPWIDGNTA 270

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + D+WS+GC +  +  GKPPF E    +    R+   K    IP  ++  A   I 
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRI--KKNEYSIPKHINPVAASLIQ 247
Query: 74  RCFEKDPDKRATAGELLEDPFLA 96
           +  + DP  R T  ELL D F  
Sbjct: 248 KMLQTDPTARPTINELLNDEFFT 270

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + D+WS+GC +  +  GKPPF E    +    R+   K    IP  ++  A   I 
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRI--KKNEYSIPKHINPVAASLIQ 249
Query: 74  RCFEKDPDKRATAGELLEDPFLA 96
           +  + DP  R T  ELL D F  
Sbjct: 250 KMLQTDPTARPTINELLNDEFFT 272

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + DIWSLGC +  +  GKPPF E    +    R+   K    +P  ++  A   I 
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRI--KKNEYSVPRHINPVASALIR 258
Query: 74  RCFEKDPDKRATAGELLEDPFLADLTA-TRSSSSGLLSP 111
           R    DP  R +  ELL D F     A  R  +S L  P
Sbjct: 259 RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVP 297

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + D+WS+GC +  +  GKPPF E    +    R+   K    IP  ++  A   I 
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRI--KKNEYSIPKHINPVAASLIQ 249
Query: 74  RCFEKDPDKRATAGELLEDPFLA 96
           +  + DP  R T  ELL D F  
Sbjct: 250 KMLQTDPTARPTINELLNDEFFT 272

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + D+WS+GC +  +  GKPPF E    +    R+   K    IP  ++  A   I 
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRI--KKNEYSIPKHINPVAASLIQ 271
Query: 74  RCFEKDPDKRATAGELLEDPFLA 96
           +  + DP  R T  ELL D F  
Sbjct: 272 KMLQTDPTARPTINELLNDEFFT 294

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + D+WS+GC +  +  GKPPF E    +    R+   K    IP  ++  A   I 
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRI--KKNEYSIPKHINPVAASLIQ 253
Query: 74  RCFEKDPDKRATAGELLEDPFLA 96
           +  + DP  R T  ELL D F  
Sbjct: 254 KMLQTDPTARPTINELLNDEFFT 276

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + DIWSLGC +  +  GKPPF E    +    R+   K    +P  ++  A   I 
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRI--KKNEYSVPRHINPVASALIR 274
Query: 74  RCFEKDPDKRATAGELLEDPFLADLTA-TRSSSSGLLSP 111
           R    DP  R +  ELL D F     A  R  +S L  P
Sbjct: 275 RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVP 313

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + DIWSLGC +  +  GKPPF E    +    R+   K    +P  ++  A   I 
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRI--KKNEYSVPRHINPVASALIR 274
Query: 74  RCFEKDPDKRATAGELLEDPFLADLTA-TRSSSSGLLSP 111
           R    DP  R +  ELL D F     A  R  +S L  P
Sbjct: 275 RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVP 313

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKA 68
           +   Y  + D+WS G  +  +  G PPF    + Q  L RV  G     P    ++SD+A
Sbjct: 178 LRKKYDEKCDVWSCGVILYILLCGYPPFGG-QTDQEILKRVEKGKFSFDPPDWTQVSDEA 236
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLC 128
           KQ +      +P KR +A E L  P++    + + +  G    +  L        +F   
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVG----KHALTGALGNMKKFQSS 292
Query: 129 KKDSQRRITLSG----VLDQDRDHICQVWLKCIQRDVDDCLLSKAHLE---ILMQGMRDN 181
           +K +Q  +   G     L++ ++ + Q++ + +  + D  L  K  +E    LMQ   D 
Sbjct: 293 QKLAQAAMLFMGSKLTTLEETKE-LTQIF-RQLDNNGDGQLDRKELIEGYRKLMQWKGDT 350
Query: 182 IAEQQKSCIETKIAQLKQELNFD 204
           +++   S IE ++  + Q ++FD
Sbjct: 351 VSDLDSSQIEAEVDHILQSVDFD 373

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + D+WS+GC +  +  GKPPF E    +    R+   K    IP  ++  A   I 
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRI--KKNEYSIPKHINPVAASLIQ 273
Query: 74  RCFEKDPDKRATAGELLEDPFLA 96
           +  + DP  R T  ELL D F  
Sbjct: 274 KMLQTDPTARPTINELLNDEFFT 296

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
            +S + DIWSLGC +  +  GKPPF E    +    R+   K    +P  ++  A   I 
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRI--KKNEYSVPRHINPVASALIR 274
Query: 74  RCFEKDPDKRATAGELLEDPFLADLTA-TRSSSSGLLSP 111
           R    DP  R +  ELL D F     A  R  +S L  P
Sbjct: 275 RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVP 313

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  + D+WSLG T +E+A  KPP   + +  +ALY +  ++         S+  + F+  
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPALQSGHWSEYFRNFVDS 249
Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C +K P  R T+  LL+  F+
Sbjct: 250 CLQKIPQDRPTSEVLLKHRFV 270

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-AALYRVGFHKMHPEIPAELSDKAKQFI 72
           SY+ ++DIWSLGC + E+    PPF      + A   R G  +    IP   SD+  + I
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---RIPYRYSDELNEII 248
Query: 73  LRCFEKDPDKRATAGELLEDPFLAD 97
            R        R +  E+LE+P + +
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLILE 273

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-AALYRVGFHKMHPEIPAELSDKAKQFI 72
           SY+ ++DIWSLGC + E+    PPF      + A   R G  +    IP   SD+  + I
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---RIPYRYSDELNEII 248
Query: 73  LRCFEKDPDKRATAGELLEDPFLAD 97
            R        R +  E+LE+P + +
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLILE 273

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-AALYRVGFHKMHPEIPAELSDKAKQFI 72
           SY+ ++DIWSLGC + E+    PPF      + A   R G  +    IP   SD+  + I
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR---RIPYRYSDELNEII 248
Query: 73  LRCFEKDPDKRATAGELLEDPFLAD 97
            R        R +  E+LE+P + +
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLILE 273

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
            + Y+   D WSLG  +    +G PPF E  + Q +L      G +   PE+ AE+S+KA
Sbjct: 332 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAEVSEKA 390
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
              + +    DP  R T  E L  P+L D
Sbjct: 391 LDLVKKLLVVDPKARFTTEEALRHPWLQD 419

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 20  DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR-CFEK 78
           D+WSLGC +  M  GK PF ++ +  + L+ +       E P ++ +K  Q +L+ C ++
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DIPEKDLQDVLKCCLKR 279
Query: 79  DPDKRATAGELLEDPFL 95
           DP +R +  ELL  P++
Sbjct: 280 DPKQRISIPELLAHPYV 296

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 20  DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR-CFEK 78
           D+WSLGC +  M  GK PF ++ +  + L+ +       E P ++ +K  Q +L+ C ++
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DIPEKDLQDVLKCCLKR 279
Query: 79  DPDKRATAGELLEDPFL 95
           DP +R +  ELL  P++
Sbjct: 280 DPKQRISIPELLAHPYV 296

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y  + D+WSLG T +E+A  KPP   + +  +ALY +  ++         S+  + F+  
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPALQSGHWSEYFRNFVDS 288
Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C +K P  R T+  LL+  F+
Sbjct: 289 CLQKIPQDRPTSEVLLKHRFV 309

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 20  DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR-CFEK 78
           D+WSLGC +  M  GK PF ++ +  + L+ +       E P ++ +K  Q +L+ C ++
Sbjct: 205 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DIPEKDLQDVLKCCLKR 263
Query: 79  DPDKRATAGELLEDPFL 95
           DP +R +  ELL  P++
Sbjct: 264 DPKQRISIPELLAHPYV 280

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 20  DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR-CFEK 78
           D+WSLGC +  M  GK PF ++ +  + L+ +       E P ++ +K  Q +L+ C ++
Sbjct: 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DIPEKDLQDVLKCCLKR 260
Query: 79  DPDKRATAGELLEDPFL 95
           DP +R +  ELL  P++
Sbjct: 261 DPKQRISIPELLAHPYV 277

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 20  DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR-CFEK 78
           D+WSLGC +  M  GK PF ++ +  + L+ +       E P ++ +K  Q +L+ C ++
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DIPEKDLQDVLKCCLKR 259
Query: 79  DPDKRATAGELLEDPFL 95
           DP +R +  ELL  P++
Sbjct: 260 DPKQRISIPELLAHPYV 276

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
            + Y+   D WSLG  +    +G PPF E  + Q +L      G +   PE+ AE+S+KA
Sbjct: 318 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAEVSEKA 376
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
              + +    DP  R T  E L  P+L D
Sbjct: 377 LDLVKKLLVVDPKARFTTEEALRHPWLQD 405

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAEL--SDKAKQFI 72
           Y  +AD+WSLG ++VE+ATG+ P+    +    L +V   +  P +P  +  S   + F+
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV-LQEEPPLLPGHMGFSGDFQSFV 264
Query: 73  LRCFEKDPDKRATAGELLEDPFL 95
             C  KD  KR    +LLE  F+
Sbjct: 265 KDCLTKDHRKRPKYNKLLEHSFI 287

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQF 71
           YS   D WS+G     +  G PPF +     A L+       ++       ++SD AK F
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYD--ENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
           I    EKDP+KR T  + L+ P++A  TA   +    +S ++  N
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKN 297

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
            + Y+   D WSLG  +    +G PPF E  + Q +L      G +   PE+ AE+S+KA
Sbjct: 192 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAEVSEKA 250
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
              + +    DP  R T  E L  P+L D
Sbjct: 251 LDLVKKLLVVDPKARFTTEEALRHPWLQD 279

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 20  DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR-CFEK 78
           D+WSLGC +  M  GK PF ++ +  + L+ +       E P ++ +K  Q +L+ C ++
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DIPEKDLQDVLKCCLKR 307
Query: 79  DPDKRATAGELLEDPFL 95
           DP +R +  ELL  P++
Sbjct: 308 DPKQRISIPELLAHPYV 324

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
            + Y+   D WSLG  +    +G PPF E  + Q +L      G +   PE+ AE+S+KA
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAEVSEKA 251
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
              + +    DP  R T  E L  P+L D
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
            + Y+   D WSLG  +    +G PPF E  + Q +L      G +   PE+ AE+S+KA
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAEVSEKA 251
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
              + +    DP  R T  E L  P+L D
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
            + Y+   D WSLG  +    +G PPF E  + Q +L      G +   PE+ AE+S+KA
Sbjct: 193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAEVSEKA 251
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
              + +    DP  R T  E L  P+L D
Sbjct: 252 LDLVKKLLVVDPKARFTTEEALRHPWLQD 280

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQF 71
           YS   D WS+G     +  G PPF +     A L+       ++       ++SD AK F
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYD--ENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
           I    EKDP+KR T  + L+ P++A  TA   +    +S ++  N
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKN 297

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELG--SPQAALYRVGFHKMHPEIPAELSDKAK 69
           +S +    D WSLG  + E+ TG  PF   G  + QA + R    K  P  P E+S  AK
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR-ILKSEPPYPQEMSALAK 294
Query: 70  QFILRCFEKDPDKRATAG 87
             I R   KDP KR   G
Sbjct: 295 DLIQRLLMKDPKKRLGCG 312

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 20  DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR-CFEK 78
           D+WSLGC +  M  GK PF ++ +  + L+ +       E P ++ +K  Q +L+ C ++
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DIPEKDLQDVLKCCLKR 307
Query: 79  DPDKRATAGELLEDPFL 95
           DP +R +  ELL  P++
Sbjct: 308 DPKQRISIPELLAHPYV 324

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 20  DIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR-CFEK 78
           D+WSLGC +  M  GK PF ++ +  + L+ +       E P ++ +K  Q +L+ C ++
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DIPEKDLQDVLKCCLKR 307
Query: 79  DPDKRATAGELLEDPFL 95
           DP +R +  ELL  P++
Sbjct: 308 DPKQRISIPELLAHPYV 324

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIEL--GSPQAALYRVGFHK--MHPEIPAELSDKAK 69
            Y    DIWSLG  +  M TG  PF      +P+  L R+G  K  +       +SD AK
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 70  QFILRCFEKDPDKRATAGELLEDPFLA 96
             + +    DP +R TA  +L  P++ 
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIV 282

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
            + Y+   D WSLG  +    +G PPF E  + Q +L      G +   PE+ AE+S+KA
Sbjct: 199 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAEVSEKA 257
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
              + +    DP  R T  E L  P+L D
Sbjct: 258 LDLVKKLLVVDPKARFTTEEALRHPWLQD 286

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQF 71
           YS   D WS+G     +  G PPF +     A L+       ++       ++SD AK F
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYD--ENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
           I    EKDP+KR T  + L+ P++A  TA   +    +S ++  N
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKN 297

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQF 71
           YS   D WS+G     +  G PPF +     A L+       ++       ++SD AK F
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYD--ENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTA 100
           I    EKDP+KR T  + L+ P++A  TA
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTA 281

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
            S+YS + D++S G  + E+ T + PF E+G P   +     +   P +   L    +  
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 236
Query: 72  ILRCFEKDPDKRATAGELLE 91
           + RC+ KDP +R +  E+++
Sbjct: 237 MTRCWSKDPSQRPSMEEIVK 256

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
            S+YS + D++S G  + E+ T + PF E+G P   +     +   P +   L    +  
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 237
Query: 72  ILRCFEKDPDKRATAGELLE 91
           + RC+ KDP +R +  E+++
Sbjct: 238 MTRCWSKDPSQRPSMEEIVK 257

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 243
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSS 105
            +P +R    E+LE P++   ++  S+S
Sbjct: 244 HNPSQRPMLREVLEHPWITANSSKPSNS 271

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 24/128 (18%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSP-------QAALYR 50
           + SSY+   D+WS+GC   EM   KP F               +G P         AL R
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 51  VGFHKMHPE----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSS 106
             FH    +       ++ +  K  +L+C   +P KR +A   L  P+  DL   + +  
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLD 311
Query: 107 GLLSPEVN 114
             L P  N
Sbjct: 312 SHLPPSQN 319

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP----AELSDKAK 69
            Y  ++D+WSLG T+ E+ATG+ P+ +  S    L +V      P++      E S    
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV-VKGDPPQLSNSEEREFSPSFI 263
Query: 70  QFILRCFEKDPDKRATAGELLEDPFL 95
            F+  C  KD  KR    ELL+ PF+
Sbjct: 264 NFVNLCLTKDESKRPKYKELLKHPFI 289

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N  Y+ ++DIW+LGC + E+ T K  F E GS +  + ++      P +    S   +  
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAF-EAGSMKNLVLKI-ISGSFPPVSLHYSYDLRSL 256
Query: 72  ILRCFEKDPDKRATAGELLEDPFLA 96
           + + F+++P  R +   +LE  F+A
Sbjct: 257 VSQLFKRNPRDRPSVNSILEKGFIA 281

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 242
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 243 HNPSQRPMLREVLEHPW---ITANSSKPS 268

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 247
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 248 HNPSQRPMLREVLEHPW---ITANSSKPS 273

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 245
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 246 HNPSQRPMLREVLEHPW---ITANSSKPS 271

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 245
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 246 HNPSQRPMLREVLEHPW---ITANSSKPS 271

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 244
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 245 HNPSQRPMLREVLEHPW---ITANSSKPS 270

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 243
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 244 HNPSQRPMLREVLEHPW---ITANSSKPS 269

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 243
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 244 HNPSQRPMLREVLEHPW---ITANSSKPS 269

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 242
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 243 HNPSQRPMLREVLEHPW---ITANSSKPS 268

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 244
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 245 HNPSQRPMLREVLEHPW---ITANSSKPS 270

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 241
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 242 HNPSQRPMLREVLEHPW---ITANSSKPS 267

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 259
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 260 HNPSQRPMLREVLEHPW---ITANSSKPS 285

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 239
Query: 78  KDPDKRATAGELLEDPFLA 96
            +P +R    E+LE P++ 
Sbjct: 240 HNPSQRPMLREVLEHPWIT 258

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 242
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 243 HNPSQRPMLREVLEHPW---ITANSSKPS 268

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 245
Query: 78  KDPDKRATAGELLEDPFLA 96
            +P +R    E+LE P++ 
Sbjct: 246 HNPSQRPMLREVLEHPWIT 264

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 247
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 248 HNPSQRPXLREVLEHPW---ITANSSKPS 273

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQ--AALYRVGFHKMHPEIPAELSDKAKQFI 72
           YS   D WS+G     +  G PPF +    +    + +  +    P    ++SD AK FI
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWD-DISDSAKDFI 257
Query: 73  LRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
               EKDP+KR T  +    P++A  TA   +    +S ++  N
Sbjct: 258 RNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKN 301

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 242
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 243 HNPSQRPMLREVLEHPW---ITANSSKPS 268

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 242
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 243 HNPSQRPMLREVLEHPW---ITANSSKPS 268

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 245
Query: 78  KDPDKRATAGELLEDPFLA 96
            +P +R    E+LE P++ 
Sbjct: 246 HNPSQRPMLREVLEHPWIT 264

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 242
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 243 HNPSQRPMLREVLEHPW---ITANSSKPS 268

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 247
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 248 HNPSQRPMLREVLEHPW---ITANSSKPS 273

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 242
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 243 HNPSQRPMLREVLEHPW---ITANSSKPS 268

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 247
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 248 HNPSQRPMLREVLEHPW---ITANSSKPS 273

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 247
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 248 HNPSQRPMLREVLEHPW---ITANSSKPS 273

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 246
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 247 HNPSQRPMLREVLEHPW---ITANSSKPS 272

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 245
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 246 HNPSQRPMLREVLEHPW---ITANSSKPS 271

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 245
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 246 HNPSQRPMLREVLEHPW---ITANSSKPS 271

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPF-EANTYQDTYKRIS--RVEFTFPDFVTEGARDLISRLLK 242
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 243 HNPSQRPMLREVLEHPW---ITANSSKPS 268

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 268
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 269 HNPSQRPMLREVLEHPW---ITANSSKPS 294

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRIS--RVEFTFPDFVTEGARDLISRLLK 268
Query: 78  KDPDKRATAGELLEDPFLADLTATRSSSS 106
            +P +R    E+LE P+   +TA  S  S
Sbjct: 269 HNPSQRPMLREVLEHPW---ITANSSKPS 294

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIEL--GSPQAALYRVGFHK--MHPEIPAELSDKAK 69
            Y    DIWSLG  +    TG  PF      +P+  L R+G  K  +       +SD AK
Sbjct: 196 GYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 70  QFILRCFEKDPDKRATAGELLEDPFLA 96
             + +    DP +R TA  +L  P++ 
Sbjct: 256 DLVSKXLHVDPHQRLTAALVLRHPWIV 282

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK---- 67
           N  Y+   D W+LGC + EM  G+ PF +    +  + R    ++  E+P E S++    
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQR---KKKIKREEVERLVKEVPEEYSERFSPQ 415
Query: 68  AKQFILRCFEKDPDKR-----ATAGELLEDPFLADLTATRSSSSGLLSP 111
           A+    +   KDP +R      +A E+ E P    L   R   +G+L P
Sbjct: 416 ARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKR-LGAGMLEP 463

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 24/112 (21%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSP-------QAALYR 50
           + SSY+   D+WS+GC   EM   KP F               +G P         AL R
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 51  VGFHKMHPE----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
             FH    +       ++ +  K  +L+C   +P KR +A   L  P+  DL
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK---- 67
           N  Y+   D W+LGC + EM  G+ PF +    +  + R    ++  E+P E S++    
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQR---KKKIKREEVERLVKEVPEEYSERFSPQ 415
Query: 68  AKQFILRCFEKDPDKR-----ATAGELLEDPFLADLTATRSSSSGLLSP 111
           A+    +   KDP +R      +A E+ E P    L   R   +G+L P
Sbjct: 416 ARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKR-LGAGMLEP 463

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGS--PQAALYRVGFHK--MHPEIPAELSDKAK 69
            Y    DIWSLG  +  M  G  PF    S  P+  L R+G  K  +       +S+ AK
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAK 260
Query: 70  QFILRCFEKDPDKRATAGELLEDPFLA 96
             + +    DP +R TA ++L+ P++ 
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPWVT 287

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGS--PQAALYRVGFHK--MHPEIPAELSDKAK 69
            Y    DIWSLG  +  M  G  PF    S  P+  L R+G  K  +       +S+ AK
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAK 260
Query: 70  QFILRCFEKDPDKRATAGELLEDPFLA 96
             + +    DP +R TA ++L+ P++ 
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPWVT 287

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 246
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
           AK FI R   KDP KR T  + L+ P++      ++ SS    P+
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 291

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKA 68
           +   Y  + D+WS G  +  +  G PPF    + Q  L RV  G     P    ++SD+A
Sbjct: 195 LRKKYDEKCDVWSCGVILYILLCGYPPFGG-QTDQEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADLTATR 102
           KQ +      +P KR +A E L  P++    + +
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQK 287

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 246
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
           AK FI R   KDP KR T  + L+ P++      ++ SS    P+
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 291

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
           AK FI R   KDP KR T  + L+ P++      ++ SS    P+
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 292

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
           AK FI R   KDP KR T  + L+ P++      ++ SS    P+
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 292

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
           AK FI R   KDP KR T  + L+ P++      ++ SS    P+
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 292

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKA 68
           +  +Y  + D+WS G  +  + +G PPF    +    L RV   K   ++P    +SD A
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
           K  I +     P  R TA + LE P++   ++   + S L S E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLE 297

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
           AK FI R   KDP KR T  + L+ P++      ++ SS    P+
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 292

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           AK FI R   KDP KR T  + L+ P++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIEL--GSPQAALYRVGFHKMHPEIPAELSDKA 68
           +  SY   AD++SLG TI+E+A      +EL  G       R G+  + PE  A LS + 
Sbjct: 228 LQGSYGTAADVFSLGLTILEVACN----MELPHGGEGWQQLRQGY--LPPEFTAGLSSEL 281
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFL 95
           +  ++   E DP  RATA  LL  P L
Sbjct: 282 RSVLVMMLEPDPKLRATAEALLALPVL 308

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           AK FI R   KDP KR T  + L+ P++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAKQF 71
           Y+ Q+D+WS G  + E+ T G  P+   G P   L+ +    H+M  E P   S++  + 
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYP--GIPPERLFNLLKTGHRM--ERPDNCSEEMYRL 284
Query: 72  ILRCFEKDPDKRATAGELLED 92
           +L+C++++PDKR    ++ +D
Sbjct: 285 MLQCWKQEPDKRPVFADISKD 305

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAKQF 71
           Y+ Q+D+WS G  + E+ T G  P+   G P   L+ +    H+M  E P   S++  + 
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYP--GIPPERLFNLLKTGHRM--ERPDNCSEEMYRL 284
Query: 72  ILRCFEKDPDKRATAGELLED 92
           +L+C++++PDKR    ++ +D
Sbjct: 285 MLQCWKQEPDKRPVFADISKD 305

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAKQF 71
           Y+ Q+D+WS G  + E+ T G  P+   G P   L+ +    H+M  E P   S++  + 
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYP--GIPPERLFNLLKTGHRM--ERPDNCSEEMYRL 284
Query: 72  ILRCFEKDPDKRATAGELLED 92
           +L+C++++PDKR    ++ +D
Sbjct: 285 MLQCWKQEPDKRPVFADISKD 305

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 3   VIFLTQY-----SVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH 57
           VI   QY     +   S   ++D++SLGC + E+ TG+PPF    SP +  Y+   H   
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPDSVAYQ---HVRE 234
Query: 58  PEIPAE-----LSDKAKQFILRCFEKDPDKR-ATAGELLED 92
             IP       LS      +L+   K+P+ R  TA E+  D
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           AK FI R   KDP KR T  + L+ P++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-LSDKAKQF 71
           + Y+ ++DIWSLGC + EMA  + PF        +L +      +P +P++  S++ +Q 
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 270
Query: 72  ILRCFEKDPDKR 83
           +  C   DP+KR
Sbjct: 271 VNMCINPDPEKR 282

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           AK FI R   KDP KR T  + L+ P++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           AK FI R   KDP KR T  + L+ P++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           AK FI R   KDP KR T  + L+ P++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM---HPEIPAELSDK 67
           +   Y+   D WS G  + EM  G+ PF   G  +  L    FH +   +P  P  L  +
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEEL----FHSIRMDNPFYPRWLEKE 245
Query: 68  AKQFILRCFEKDPDKR-ATAGELLEDPFLADLT 99
           AK  +++ F ++P+KR    G++ + P   ++ 
Sbjct: 246 AKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 278

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM---HPEIPAELSDK 67
           +   Y+   D WS G  + EM  G+ PF   G  +  L    FH +   +P  P  L  +
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEEL----FHSIRMDNPFYPRWLEKE 244
Query: 68  AKQFILRCFEKDPDKR-ATAGELLEDPFLADLT 99
           AK  +++ F ++P+KR    G++ + P   ++ 
Sbjct: 245 AKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           AK FI R   KDP KR T  + L+ P++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKA 68
           +  +Y  + D+WS G  +  + +G PPF    +    L RV   K   ++P    +SD A
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFL 95
           K  I +     P  R TA + LE P++
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-----ELGSPQAALYRVGFHKMHPEIP-------- 61
           Y  + D+WSLG  +  M +G PPF+     + G  +  + RV  +K+   I         
Sbjct: 203 YDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD 262
Query: 62  ---AELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
              A +S +AK  I +   +D  +R +A ++L+ P++
Sbjct: 263 KDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  V    ++   E  +  S  
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSAL 247
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           AK FI R   KDP KR T  + L+ P++
Sbjct: 248 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 3   VIFLTQY-----SVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH 57
           VI   QY     +   S   ++D++SLGC + E+ TG+PPF    SP +  Y+   H   
Sbjct: 196 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ---HVRE 251
Query: 58  PEIPAE-----LSDKAKQFILRCFEKDPDKR-ATAGELLED 92
             IP       LS      +L+   K+P+ R  TA E+  D
Sbjct: 252 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 292

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKA 68
           +  +Y  + D+WS G  +  + +G PPF    +    L RV   K   ++P    +SD A
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 69  KQFILRCFEKDPDKRATAGELLEDPFL 95
           K  I +     P  R TA + LE P++
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   G PPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPF-EAHTYQETYRRIS--RVEFTFPDFVTEGARDLISRLLK 246
Query: 78  KDPDKRATAGELLEDPFL 95
            +  +R T  E+LE P++
Sbjct: 247 HNASQRLTLAEVLEHPWI 264

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 18  QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE 77
           + D+WSLG    E   G PPF E  + Q    R+   ++    P  +++ A+  I R  +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPF-EAHTYQETYRRIS--RVEFTFPDFVTEGARDLISRLLK 246
Query: 78  KDPDKRATAGELLEDPFL 95
            +  +R T  E+LE P++
Sbjct: 247 HNASQRLTLAEVLEHPWI 264

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 3   VIFLTQY-----SVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH 57
           VI   QY     +   S   ++D++SLGC + E+ TG+PPF    SP +  Y+   H   
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ---HVRE 234
Query: 58  PEIPAE-----LSDKAKQFILRCFEKDPDKR-ATAGELLED 92
             IP       LS      +L+   K+P+ R  TA E+  D
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 28/115 (24%)
Query: 15  YSPQADIWSLGCTIVEMATGK---------------------PP--FIE-LGSPQAALYR 50
           Y+   DIWS+GC + EM TGK                     PP  F++ L S +A  Y 
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM 262
Query: 51  VGFHKMHPEIPAELSDKAKQFILRCFEK----DPDKRATAGELLEDPFLADLTAT 101
            G  ++  +  A +   A    +   EK    D ++R TAGE L  P+   L  T
Sbjct: 263 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 317

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 3   VIFLTQY-----SVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH 57
           VI   QY     +   S   ++D++SLGC + E+ TG+PPF    SP +  Y+   H   
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ---HVRE 234
Query: 58  PEIPAE-----LSDKAKQFILRCFEKDPDKR-ATAGELLED 92
             IP       LS      +L+   K+P+ R  TA E+  D
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 3   VIFLTQY-----SVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH 57
           VI   QY     +   S   ++D++SLGC + E+ TG+PPF    SP +  Y+   H   
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ---HVRE 234
Query: 58  PEIPAE-----LSDKAKQFILRCFEKDPDKR-ATAGELLED 92
             IP       LS      +L+   K+P+ R  TA E+  D
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 3   VIFLTQY-----SVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH 57
           VI   QY     +   S   ++D++SLGC + E+ TG+PPF    SP +  Y+   H   
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ---HVRE 234
Query: 58  PEIPAE-----LSDKAKQFILRCFEKDPDKR-ATAGELLED 92
             IP       LS      +L+   K+P+ R  TA E+  D
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           S +S  +D+WS G  + E+ TG+ PF  +    A  Y V  +K+   IP+   +   + +
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-LAVAYGVAMNKLALPIPSTCPEPFAKLM 247
Query: 73  LRCFEKDPDKRATAGELLE 91
             C+  DP  R +   +L+
Sbjct: 248 EDCWNPDPHSRPSFTNILD 266

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AELSDKAKQFI 72
           Y  + D+WS+G  +  +  G PPF    + Q  L +V   K   + P    +S+ AK  I
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPF-GGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI 272
Query: 73  LRCFEKDPDKRATAGELLEDPFLADLTATRSSS 105
            +  + D  +R +A + LE P++ ++ + + S 
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIKEMCSKKESG 305

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 31/115 (26%)
Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSPQAALY----------- 49
           +YS   DIWS GC + EM TGKP F               +G+P  +L+           
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244
Query: 50  -------RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD 97
                  R     + P     L      F+    + +PD R +A + L  P+ A+
Sbjct: 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 24/109 (22%)
Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSP-------QAALYR 50
           + SSY+   D+WS+GC   EM   KP F               +G P         AL R
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 51  VGFHKMHPE----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
             FH    +       ++ +  K  +L+C   +P KR +A   L  P+ 
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 10  SVNSSYSPQADIWSLGCTIVEMATGKPPF-----IELGSPQAALYRVGFHKM-HPEIPAE 63
           +    Y    D+WSLG  +  +  G PPF     + +        R+G ++  +PE  +E
Sbjct: 170 TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW-SE 228
Query: 64  LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           +S++ K  I    + +P +R T  E +  P++   T
Sbjct: 229 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 19  ADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK 78
           AD+WS    + E+ T + PF +L + +  + +V    + P IP  +S    + +  C  +
Sbjct: 192 ADMWSFAVLLWELVTREVPFADLSNMEIGM-KVALEGLRPTIPPGISPHVSKLMKICMNE 250
Query: 79  DPDKR 83
           DP KR
Sbjct: 251 DPAKR 255

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 14  SYSP---QADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGF--HKMHPEIPAELSDK 67
           +Y P   +AD+WS+G     + +G  PF  LG + Q  L  +    +    E  +  S+ 
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPF--LGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTA--TRSSSSG 107
           AK FI R   KDP +R T  + LE  ++  +     R   SG
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGEDSG 283

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 15  YSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAAL---------YRVG 52
           YS   DIWSLGC   EM T +  F               LG+P   +         Y+  
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 53  FHKM----HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-45
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-35
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-31
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-28
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-28
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-27
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-27
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-25
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-23
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-22
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-22
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-22
3aln_A	327	Dual specificity mitogen-activated protein kinase;	6e-22
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-21
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-21
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-20
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-20
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-20
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-20
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-20
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-20
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	8e-20
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-20
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-18
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-17
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-17
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-16
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-16
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-16
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-16
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-15
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-15
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-15
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-14
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-14
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-14
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-14
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	7e-14
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-13
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-13
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-13
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-13
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-13
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-13
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-12
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-12
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-12
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-12
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-12
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-12
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-12
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-12
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-12
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	9e-12
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-11
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-11
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-11
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-11
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-11
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-11
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-11
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-11
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-11
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-11
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-11
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	6e-11
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-10
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-10
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-10
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-10
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-10
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-10
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-10
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-10
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-10
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-10
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-10
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-10
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-10
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-10
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-10
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-10
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-10
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-10
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-10
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	9e-10
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-09
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-09
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-09
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-09
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-09
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	4e-09
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	5e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-09
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	6e-09
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-09
3niz_A	311	Rhodanese family protein; structural genomics, str	7e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-09
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-08
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-08
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-08
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-08
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-08
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-08
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-08
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-08
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-08
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	7e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-07
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-07
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-07
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-07
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-07
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-07
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-07
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	5e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	6e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	8e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-04

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  152 bits (386), Expect = 1e-45
 Identities = 57/97 (58%), Positives = 69/97 (71%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              Y   ADIWSLGCTI+EMATGKPPF ELG PQAA+++VG  K+HPEIP  +S +AK F
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 258

Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGL 108
           IL+CFE DPDKRA A +LL D FL   +  + +   L
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQPKL 295

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  126 bits (318), Expect = 3e-35
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQ 70
                 + DIWS  C ++ M  G  P+ +         ++        EIP   +    Q
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQY-FRGPLCLKIASEPPPIREIPPSCAPLTAQ 288

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSP 111
            I     K+P  RA+A EL      A          GL SP
Sbjct: 289 AIQEGLRKEPVHRASAMELRRKVGKA-----LQEVGGLKSP 324

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  114 bits (288), Expect = 3e-31
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK-AK 69
               Y    D+++ G  ++EMAT + P+ E     A +YR     + P    +++    K
Sbjct: 202 YEEKYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKPASFDKVAIPEVK 260

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLADLT 99
           + I  C  ++ D+R +  +LL   F  + T
Sbjct: 261 EIIEGCIRQNKDERYSIKDLLNHAFFQEET 290

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  107 bits (270), Expect = 7e-28
 Identities = 26/100 (26%), Positives = 48/100 (48%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
            SP++D+WSLGC +  M  GK PF ++ +  + L+ +       E P       +  +  
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKC 303

Query: 75  CFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVN 114
           C ++DP +R +  ELL  P++   T   +  +   + E+ 
Sbjct: 304 CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMK 343

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  107 bits (268), Expect = 8e-28
 Identities = 26/100 (26%), Positives = 48/100 (48%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
            SP++D+WSLGC +  M  GK PF ++ +  + L+ +       E P       +  +  
Sbjct: 197 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKC 256

Query: 75  CFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVN 114
           C ++DP +R +  ELL  P++   T   +  +   + E+ 
Sbjct: 257 CLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMK 296

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  104 bits (261), Expect = 5e-27
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
            SP++D+WSLGC +  M  GK PF ++ +  + L+ +       E P       +  +  
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKC 275

Query: 75  CFEKDPDKRATAGELLEDPFL 95
           C ++DP +R +  ELL  P++
Sbjct: 276 CLKRDPKQRISIPELLAHPYV 296

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  102 bits (257), Expect = 9e-27
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N ++ P+ADI++L  T+V  A  +P            +        P IP  LS +  + 
Sbjct: 205 NYTHLPKADIFALALTVVCAAGAEPLP-----RNGDQWHEIRQGRLPRIPQVLSQEFTEL 259

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           +      DP++R +A  L++   L
Sbjct: 260 LKVMIHPDPERRPSAMALVKHSVL 283

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 99.3 bits (248), Expect = 3e-25
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
           +  SY   AD++SLG TI+E+A         G     L +     + PE  A LS + + 
Sbjct: 228 LQGSYGTAADVFSLGLTILEVACNMELPHG-GEGWQQLRQ---GYLPPEFTAGLSSELRS 283

Query: 71  FILRCFEKDPDKRATAGELLEDPFL 95
            ++   E DP  RATA  LL  P L
Sbjct: 284 VLVMMLEPDPKLRATAEALLALPVL 308

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 93.5 bits (233), Expect = 5e-23
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-LSDKAKQ 70
            + Y+ ++DIWSLGC + EMA  + PF        +L +      +P +P++  S++ +Q
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269

Query: 71  FILRCFEKDPDKRATAGELLEDPFL 95
            +  C   DP+KR     + +    
Sbjct: 270 LVNMCINPDPEKRPDVTYVYDVAKR 294

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 91.9 bits (229), Expect = 1e-22
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAEL-SDKAKQ 70
              YS ++DIWSLG T++E+A  + P+   G+P   L +V   +  P++PA+  S +   
Sbjct: 187 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-VEEPSPQLPADKFSAEFVD 245

Query: 71  FILRCFEKDPDKRATAGELLEDPFL 95
           F  +C +K+  +R T  EL++ PF 
Sbjct: 246 FTSQCLKKNSKERPTYPELMQHPFF 270

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 91.3 bits (227), Expect = 6e-22
 Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 8/124 (6%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           N  Y+ ++DIW+LGC + E+ T K  F E GS +  + ++      P +    S   +  
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAF-EAGSMKNLVLKII-SGSFPPVSLHYSYDLRSL 256

Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKD 131
           + + F+++P  R +   +LE  F+             LSP++       +    +  +  
Sbjct: 257 VSQLFKRNPRDRPSVNSILEKGFI------AKRIEKFLSPQLIAEEFCLKTFSKFGSQPI 310

Query: 132 SQRR 135
             +R
Sbjct: 311 PAKR 314

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 90.8 bits (226), Expect = 6e-22
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH---KMHPEIPAELSDKA 68
              Y  ++D+WSLG T+ E+ATG+ P+ +  S    L +V      ++      E S   
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSF 262

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFL 95
             F+  C  KD  KR    ELL+ PF+
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI 289

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 88.6 bits (220), Expect = 3e-21
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAEL--SDKAK 69
              Y  +AD+WSLG ++VE+ATG+ P+    +    L +V   +  P +P  +  S   +
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV-LQEEPPLLPGHMGFSGDFQ 261

Query: 70  QFILRCFEKDPDKRATAGELLEDPFL 95
            F+  C  KD  KR    +LLE  F+
Sbjct: 262 SFVKDCLTKDHRKRPKYNKLLEHSFI 287

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 87.4 bits (217), Expect = 7e-21
 Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 7/104 (6%)

Query: 3   VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---E 59
           V+       ++ Y  +ADIWSLG T++EMA  +PP  EL +P   L ++   K  P    
Sbjct: 188 VVMCETMK-DTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIA--KSDPPTLL 243

Query: 60  IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRS 103
            P++ S + + F+    +K+P+ R +A +LLE PF++ +T+ ++
Sbjct: 244 TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKA 287

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 6/86 (6%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKAK 69
            +Y P+ DIWSLG   +EM  G+PP++   +P  ALY +          + P +LS   +
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIA--TNGTPELQNPEKLSAIFR 247

Query: 70  QFILRCFEKDPDKRATAGELLEDPFL 95
            F+ RC E D +KR +A ELL+  FL
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFL 273

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 6/86 (6%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKAK 69
           S Y+ + DIWSLG  ++EM  G+PP+    SP  A+ R+      P   +   ++S   +
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPPYFSD-SPVQAMKRLR--DSPPPKLKNSHKVSPVLR 272

Query: 70  QFILRCFEKDPDKRATAGELLEDPFL 95
            F+ R   +DP +RATA ELL+ PFL
Sbjct: 273 DFLERMLVRDPQERATAQELLDHPFL 298

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
            S+Y  +ADIWSLG T +E+A G+PP  EL  P   L+ +  +   P +    S   K+F
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNNP-PTLEGNYSKPLKEF 250

Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTATRSS 104
           +  C  K+P  R TA ELL+  F+       S 
Sbjct: 251 VEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 283

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 86.3 bits (214), Expect = 2e-20
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKA 68
              Y+  ADIWSLG T +EMA GKPP+ ++  P  A++ +      P     P   SD  
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPYADI-HPMRAIFMIP--TNPPPTFRKPELWSDNF 255

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADLTATRS 103
             F+ +C  K P++RATA +LL+ PF+        
Sbjct: 256 TDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSI 290

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 84.6 bits (210), Expect = 5e-20
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
             SY+ ++DIWSLGC + E+    PPF      Q  L           IP   SD+  + 
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFT--AFSQKELAGKIREGKFRRIPYRYSDELNEI 247

Query: 72  ILRCFEKDPDKRATAGELLEDPFLAD 97
           I R        R +  E+LE+P + +
Sbjct: 248 ITRMLNLKDYHRPSVEEILENPLILE 273

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 84.7 bits (210), Expect = 7e-20
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY--------RVGFHKMHPEIPAE 63
              Y  +ADIWS G T +E+ATG  P+ +   P   L          +       E+  +
Sbjct: 201 VRGYDFKADIWSFGITAIELATGAAPYHKY-PPMKVLMLTLQNDPPSLETGVQDKEMLKK 259

Query: 64  LSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
                ++ I  C +KDP+KR TA ELL   F 
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 84.7 bits (210), Expect = 8e-20
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 3   VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI-P 61
           VI     + +++Y  ++D+WSLG T +EMA G PP  ++  P  AL+ +  +   P +  
Sbjct: 200 VI-ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPMRALFLIPRNPA-PRLKS 256

Query: 62  AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLL 109
            + S K + FI  C  K+  +R    +L++ PF+ D    R     L 
Sbjct: 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLK 304

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 85.2 bits (211), Expect = 9e-20
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%)

Query: 3   VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI-P 61
           VI          Y  + D+WSLG T +E+A  KPP   + +  +ALY +  ++  P +  
Sbjct: 221 VILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNE-SPALQS 275

Query: 62  AELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
              S+  + F+  C +K P  R T+  LL+  F+
Sbjct: 276 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 82.5 bits (204), Expect = 1e-18
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 1/89 (1%)

Query: 10  SVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKA 68
               + +   DI+S GC    + + G  PF +    QA +                   A
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA 260

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
           ++ I +    DP KR +A  +L+ PF   
Sbjct: 261 RELIEKMIAMDPQKRPSAKHVLKHPFFWS 289

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 77.7 bits (192), Expect = 2e-17
 Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 7/84 (8%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           +  Y  + D+++LG  + E+        E       L           I      K K  
Sbjct: 195 SQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDL-------RDGIISDIFDKKEKTL 247

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + +   K P+ R    E+L    +
Sbjct: 248 LQKLLSKKPEDRPNTSEILRTLTV 271

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 78.9 bits (194), Expect = 2e-17
 Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 6/100 (6%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY-RVGFHKMHPE-----IPAELSDKA 68
           ++   + W LG +I  +     PF  +       + R        +         L D  
Sbjct: 270 FTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFV 329

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGL 108
           K  I R    D  +R    E +E P    L    SSS   
Sbjct: 330 KTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSLST 369

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 75.8 bits (187), Expect = 1e-16
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIPAELSDKAK 69
             Y+ + D++SLG    EM    P     G  +  + +       +  P+         K
Sbjct: 206 GHYNEKIDMYSLGIIFFEMIY--PFS--TGMERVNILKKLRSVSIEFPPDFDDNKMKVEK 261

Query: 70  QFILRCFEKDPDKRATAGELLEDPFL 95
           + I    + DP+KR  A  LL   +L
Sbjct: 262 KIIRLLIDHDPNKRPGARTLLNSGWL 287

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 76.2 bits (187), Expect = 2e-16
 Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 7/100 (7%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           +  +   D W+LG  I  +     P     +       +   +    IP       +  +
Sbjct: 292 TLMTFAFDTWTLGLAIYWIWCADLPN-TDDAALGGSEWI--FRSCKNIPQP----VRALL 344

Query: 73  LRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
                   + R    + +E P    L    S++  L   +
Sbjct: 345 EGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTD 384

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 74.7 bits (183), Expect = 5e-16
 Identities = 12/86 (13%), Positives = 22/86 (25%), Gaps = 7/86 (8%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           +  +   D W+LG  I  +     P                 +    IP       +  +
Sbjct: 288 TLMTFSFDAWALGLVIYWIWCADLPIT--KDAALGGSEW-IFRSCKNIPQP----VRALL 340

Query: 73  LRCFEKDPDKRATAGELLEDPFLADL 98
                   + R    + +E P    L
Sbjct: 341 EGFLRYPKEDRLLPLQAMETPEYEQL 366

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 74.6 bits (183), Expect = 6e-16
 Identities = 24/139 (17%), Positives = 39/139 (28%), Gaps = 45/139 (32%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIEL--------------------------------- 41
           Y  ++DI+S+G T  E+A G  PF ++                                 
Sbjct: 214 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPS 273

Query: 42  ----------GSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLE 91
                         +                  S     F+ +C +++PD R +A  LL 
Sbjct: 274 RSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333

Query: 92  DPFLADLTATRSSSSGLLS 110
             F       R +S  L  
Sbjct: 334 HSFFK--QIKRRASEALPE 350

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 72.6 bits (178), Expect = 3e-15
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 41/125 (32%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF------------------------IELGSPQAA 47
            + YS Q+DIWS+G ++VEMA G+ P                             +P   
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263

Query: 48  LYRVGFHKMHPEIPAEL-----------------SDKAKQFILRCFEKDPDKRATAGELL 90
           L + G     P    EL                 S + + F+ +C  K+P +RA   +L+
Sbjct: 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 323

Query: 91  EDPFL 95
              F+
Sbjct: 324 VHAFI 328

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 72.0 bits (177), Expect = 3e-15
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
            +SYS + DI+SLG  + E+     PF      +        +   P +  +        
Sbjct: 204 GNSYSHKVDIFSLGLILFELLY---PF-STQMERVRTLTDVRNLKFPPLFTQKYPCEYVM 259

Query: 72  ILRCFEKDPDKRATAGELLEDPFLADL 98
           +       P +R  A  ++E+    DL
Sbjct: 260 VQDMLSPSPMERPEAINIIENAVFEDL 286

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 70.7 bits (174), Expect = 8e-15
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              +S + D+WS+GC +  +  GKPPF    S     Y     K    IP  ++  A   
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFET--SCLKETYL-RIKKNEYSIPKHINPVAASL 245

Query: 72  ILRCFEKDPDKRATAGELLEDP-FLADLTATRSSSSGLLSP 111
           I +  + DP  R T  ELL D  F +     R   + L  P
Sbjct: 246 IQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 286

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 16/82 (19%), Positives = 30/82 (36%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           +     + D+WSLGC +  M  G+ P+  +     ++     +++        S    Q 
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQL 279

Query: 72  ILRCFEKDPDKRATAGELLEDP 93
           +      DP +R     LL   
Sbjct: 280 LNSMMTVDPHQRPHIPLLLSQL 301

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 70.7 bits (173), Expect = 1e-14
 Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
            ++YS + DI+SLG  + E+       +E       +     +   P +  +   +    
Sbjct: 250 GNNYSHKVDIFSLGLILFELLYSFSTQMER----VRIITDVRNLKFPLLFTQKYPQEHMM 305

Query: 72  ILRCFEKDPDKRATAGELLEDPFLADL 98
           +       P +R  A +++E+    +L
Sbjct: 306 VQDMLSPSPTERPEATDIIENAIFENL 332

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 5/102 (4%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
            Y+   D WSLG  +    +G PPF E    Q +L      G +   PE+ AE+S+KA  
Sbjct: 320 GYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 378

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
            + +    DP  R T  E L  P+L D    +     LLS E
Sbjct: 379 LVKKLLVVDPKARFTTEEALRHPWLQD-EDMKRKFQDLLSEE 419

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           +S + D+WS+GC +  +  GKPPF    S     Y     K    IP  ++  A   I +
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFET--SCLKETYL-RIKKNEYSIPKHINPVAASLIQK 274

Query: 75  CFEKDPDKRATAGELLEDPF 94
             + DP  R T  ELL D F
Sbjct: 275 MLQTDPTARPTINELLNDEF 294

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 69.7 bits (171), Expect = 4e-14
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 5/103 (4%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIPAELSDKAKQ 70
            Y+ + D+WS G  +  +  G PPF   G     + +    G +         +SD+AK+
Sbjct: 223 KYNEKCDVWSCGVIMYILLCGYPPFG--GQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEV 113
            I      D +KR TA E L   ++       + S        
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGA 323

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 68.6 bits (168), Expect = 7e-14
 Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 5/106 (4%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDK 67
           ++ +Y  + D+WS G  +  + +G PPF   G+ +  + +    G +        ++S+ 
Sbjct: 200 LHGTYDEKCDVWSTGVILYILLSGCPPFN--GANEYDILKKVEKGKYTFELPQWKKVSES 257

Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEV 113
           AK  I +     P  R +A + L+  ++   T  + S         
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNA 303

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYR--VGFHKMHPEIPAELSDKAKQF 71
            +   DI+S+GC    + + GK PF +  S ++ + R      +M       L  +A   
Sbjct: 216 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDL 275

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           I +  + DP KR TA ++L  P  
Sbjct: 276 ISQMIDHDPLKRPTAMKVLRHPLF 299

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 11/100 (11%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR----VGFHKMHPEIPAELSDK 67
            S++  ++D+WSLGC    +  G+PPF                  +      +P+ LS +
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDT--DTVKNTLNKVVLADYE-----MPSFLSIE 238

Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSG 107
           AK  I +   ++P  R +   +L+ PF++  ++T+S   G
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              +  + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRI--SRVEFTFPDFVTEGARDL 237

Query: 72  ILRCFEKDPDKRATAGELLEDPF 94
           I R  + +P +R    E+LE P+
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPW 260

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 5/109 (4%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDK 67
           +   Y  + D+WS+G  +  +  G PPF   G     + R    G +         +S+ 
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPFG--GQTDQEILRKVEKGKYTFDSPEWKNVSEG 267

Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
           AK  I +  + D  +R +A + LE P++ ++ + + S   L S    + 
Sbjct: 268 AKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIE 316

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 67.2 bits (164), Expect = 2e-13
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 5/89 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIPAELSDKAKQ 70
           SY P+ D WS G  +  +  G  PF   G   A                    LS  A+ 
Sbjct: 252 SYGPKCDAWSAGVLLHLLLMGAVPF--PGVNDADTISQVLNKKLCFENPNYNVLSPLARD 309

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLT 99
            +     ++ D+R  A   L+ P+++  +
Sbjct: 310 LLSNLLNRNVDERFDAMRALQHPWISQFS 338

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 66.5 bits (163), Expect = 3e-13
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
            Y+   D WSLG  +    +G PPF E    Q +L      G +   PE+ AE+S+KA  
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSE-HRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPE 121
            + +    DP  R T  E L  P+L D    R      L  E N ++  P+
Sbjct: 254 LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD--LLSEENESTALPQ 302

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 66.2 bits (162), Expect = 5e-13
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIPAELSDKAKQ 70
           +Y  + D+WS G  +  + +G PPF   G  +  + +    G +         +SD AK 
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFY--GKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
            I +     P  R TA + LE P++   ++   + S L S E  + 
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMT 301

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 3/86 (3%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-IELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           YS   D WSLG T  E+  G+ P+ I   +    +    F       P+  S +    + 
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT-FETTVVTYPSAWSQEMVSLLK 252

Query: 74  RCFEKDPDKR-ATAGELLEDPFLADL 98
           +  E +PD+R +   ++   P++ D+
Sbjct: 253 KLLEPNPDQRFSQLSDVQNFPYMNDI 278

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 64.6 bits (158), Expect = 1e-12
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 12  NSSYSPQADIWSLGCTIV--EMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK 69
           +   + ++D++S G  ++  E+AT + P+  L   Q     VGF     EIP  L+ +  
Sbjct: 213 DEPSNEKSDVYSFG--VILWELATLQQPWGNLNPAQVV-AAVGFKCKRLEIPRNLNPQVA 269

Query: 70  QFILRCFEKDPDKR 83
             I  C+  +P KR
Sbjct: 270 AIIEGCWTNEPWKR 283

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 64.2 bits (157), Expect = 1e-12
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 12  NSSYSPQADIWSLGCTIV--EMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK 69
            S +S  +D+WS G  ++  E+ TG+ PF  +     A Y V  +K+   IP+   +   
Sbjct: 188 ASMFSKGSDVWSYG--VLLWELLTGEVPFRGIDGLAVA-YGVAMNKLALPIPSTCPEPFA 244

Query: 70  QFILRCFEKDPDKRATAGELLE 91
           + +  C+  DP  R +   +L+
Sbjct: 245 KLMEDCWNPDPHSRPSFTNILD 266

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 64.4 bits (157), Expect = 2e-12
 Identities = 21/114 (18%), Positives = 32/114 (28%), Gaps = 26/114 (22%)

Query: 6   LTQYSVNSSYSPQADIWSLGCTIVEMATGKPPF---------------IELGSPQAALYR 50
           + +      Y    D+WS+G T    ATG  PF               I  G P  A+  
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250

Query: 51  VGFHKMHP-----------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDP 93
           V   +  P            +   L       +    E D +K     +   + 
Sbjct: 251 VQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
             ++  + D+W  G    E   G PPF          +R     +  + P  LSD +K  
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPF--DSPSHTETHR-RIVNVDLKFPPFLSDGSKDL 242

Query: 72  ILRCFEKDPDKRATAGELLEDPF 94
           I +     P +R     ++E P+
Sbjct: 243 ISKLLRYHPPQRLPLKGVMEHPW 265

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 24/107 (22%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH---------KMHPEIPAELSDK 67
            +ADI++L C + E  TG PP+   G   + +     H          + P IP      
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQ--GDQLSVMGA---HINQAIPRPSTVRPGIPVAFDA- 267

Query: 68  AKQFILRCFEKDPDKR-ATAGELLEDPFLADLTATRSSSSGLLSPEV 113
               I R   K+P+ R  T G+       A   A  +++    + ++
Sbjct: 268 ---VIARGMAKNPEDRYVTCGD-----LSAAAHAALATADQDRATDI 306

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 33/128 (25%), Positives = 45/128 (35%), Gaps = 45/128 (35%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF------------------IE-LGSPQAALYRVG--- 52
           +   ADIWS  C I E+ TG   F                  IE LG   + L R G   
Sbjct: 212 WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT 271

Query: 53  ---FHKM--------------HPEIPAELS---DKAKQF---ILRCFEKDPDKRATAGEL 89
              F+                   +  +     D+AK+    +    + DP KRA AG L
Sbjct: 272 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331

Query: 90  LEDPFLAD 97
           +  P+L D
Sbjct: 332 VNHPWLKD 339

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 63.5 bits (155), Expect = 3e-12
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 12  NSSYSPQADIWSLGCTIV--EMATGKPPFIELGSPQAA-LYRVGFHKMHPEIPAELSDKA 68
             SY+ +AD +S    ++   + TG+ PF E    +   +  +    + P IP +   + 
Sbjct: 202 EESYTEKADTYSFA--MILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259

Query: 69  KQFILRCFEKDPDKRATAGELLE 91
           +  I  C+  DP KR     +++
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVK 282

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 63.8 bits (155), Expect = 4e-12
 Identities = 36/128 (28%), Positives = 43/128 (33%), Gaps = 45/128 (35%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------------IE-LGSPQAALYRVG- 52
           S Y+  ADIWS  C   E+ATG   F                  IE LG     L   G 
Sbjct: 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGK 327

Query: 53  --------------FHKMHP-----------EIPAELSDKAKQFILRCFEKDPDKRATAG 87
                           K+ P           E   E +     F+L   E  P+KRATA 
Sbjct: 328 YSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAA 387

Query: 88  ELLEDPFL 95
           E L  P+L
Sbjct: 388 ECLRHPWL 395

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 63.0 bits (154), Expect = 4e-12
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 6/88 (6%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDK 67
                + + DIWS G  +  + TG  PF   G+    + +           E    L+ +
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPF--TGTSLEEVQQKATYKEPNYAVE-CRPLTPQ 254

Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFL 95
           A   + +   KDP++R +A ++L   + 
Sbjct: 255 AVDLLKQMLTKDPERRPSAAQVLHHEWF 282

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 63.1 bits (154), Expect = 4e-12
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 10/121 (8%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------IELGSPQAALYRV--GFHKMHPEIPAEL 64
           + Y    D+WSLG  +  M +G+ PF      +   S    + ++  G      E    +
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243

Query: 65  SDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDR 124
           S +AK  I      DP+KR     L  + +L D   ++ SS+ L++P++  +S +     
Sbjct: 244 SQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD--GSQLSSNPLMTPDILGSSGAAVHTC 301

Query: 125 F 125
            
Sbjct: 302 V 302

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 63.1 bits (154), Expect = 4e-12
 Identities = 21/72 (29%), Positives = 36/72 (50%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
            S+YS + D++S G  + E+ T + PF E+G P   +     +   P +   L    +  
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 236

Query: 72  ILRCFEKDPDKR 83
           + RC+ KDP +R
Sbjct: 237 MTRCWSKDPSQR 248

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 63.1 bits (154), Expect = 5e-12
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 29/115 (25%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IE-LGSP-------------QA 46
             Y+   DIWS+GC   EM  G+P F            +  LG P               
Sbjct: 207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDV 266

Query: 47  ALY---RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
            LY    + +  +  +   + + +A   +    +  P++R    E L  P+  +L
Sbjct: 267 DLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 62.7 bits (153), Expect = 8e-12
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAKQ 70
            +Y P+ D+WS+G     +  G  PF +    Q    R+    +        E+S  AK 
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKD 284

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLS 110
            + +    DP KR T  + L+ P++    A          
Sbjct: 285 LVRKLIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQK 324

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 62.5 bits (152), Expect = 9e-12
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 11/86 (12%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKA 68
           N     + DIW+LGC +  +   + PF E G+    +   Y +  H              
Sbjct: 227 NFPIGEKQDIWALGCILYLLCFRQHPF-EDGAKLRIVNGKYSIPPHDTQ-------YTVF 278

Query: 69  KQFILRCFEKDPDKRATAGELLEDPF 94
              I    + +P++R +  E++    
Sbjct: 279 HSLIRAMLQVNPEERLSIAEVVHQLQ 304

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 62.2 bits (152), Expect = 9e-12
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 5/91 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
            YS   D WS+G     +  G PPF      ++ L+     G+++       ++S+ AK 
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPF--YEETESKLFEKIKEGYYEFESPFWDDISESAKD 240

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTAT 101
           FI    EKDP++R T  + L  P++   TA 
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWIDGNTAL 271

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 28/112 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSP---------QAALYR-V 51
           Y P  D+W++GC   E+ +G P +     ++        LG               +  V
Sbjct: 180 YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239

Query: 52  GFHKMHPEIPAE-----LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
                    P E     +S  A   +  C   DP +R T  +LL  P+  ++
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 61.5 bits (150), Expect = 1e-11
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
            Y P+ D WS G  +  +  G PPF       + +      G      +    +S +A+ 
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPPF--SAPTDSEVMLKIREGTFTFPEKDWLNVSPQAES 240

Query: 71  FILRCFEKDPDKRATAGELLEDPFLAD 97
            I R   K P +R T+ + LE  +   
Sbjct: 241 LIRRLLTKSPKQRITSLQALEHEWFEK 267

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 61.5 bits (150), Expect = 1e-11
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 12  NSSYSPQADIWSLGCTIV--EMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK 69
             +    AD+WS    ++  E+ T + PF +L S      +V    + P IP  +S    
Sbjct: 185 EDTNRRSADMWSFA--VLLWELVTREVPFADL-SNMEIGMKVALEGLRPTIPPGISPHVS 241

Query: 70  QFILRCFEKDPDKR 83
           + +  C  +DP KR
Sbjct: 242 KLMKICMNEDPAKR 255

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAKQ 70
             Y    D+W  G  +  + +G  PF   G+ +     +  G +KM+P   + +S+ AK 
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWSHISESAKD 265

Query: 71  FILRCFEKDPDKRATAGELLEDPFLAD 97
            + R    DP +R T  E L  P+L +
Sbjct: 266 LVRRMLMLDPAERITVYEALNHPWLKE 292

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 21/89 (23%)

Query: 16  SPQADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGFH----------KMHPEIPAEL 64
               DI+S+G  + EM  G+PPF   G +  +   +   H           +  +IP  L
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFN--GETAVSIAIK---HIQDSVPNVTTDVRKDIPQSL 244

Query: 65  SDKAKQFILRCFEKDPDKR-ATAGELLED 92
           S+     ILR  EKD   R  T  E+ +D
Sbjct: 245 SN----VILRATEKDKANRYKTIQEMKDD 269

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 29/111 (26%), Positives = 39/111 (35%), Gaps = 27/111 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSP---------QAALYRVG 52
           YS   DIWS+ C   EM    P F     I+        LG P             ++  
Sbjct: 215 YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQS 274

Query: 53  FHKMHP-----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           F K         + A L D+    +    E DP KR +A   LE P+ +  
Sbjct: 275 FPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 60.9 bits (148), Expect = 2e-11
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 13/96 (13%)

Query: 16  SPQADIWSLGCTIVEMATGKPPFIELG--SPQAALYRVGF------HKMHPEIPAELSDK 67
           +PQ DI  +G ++  +   + P  E G  S  A   R           +  +IP ++S  
Sbjct: 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISA- 238

Query: 68  AKQFILRCFEKDPDKR-ATAGELLEDPFLADLTATR 102
                 R  + D   R A+    L     A    T 
Sbjct: 239 ---VAARSVQGDGGIRSASTLLNLMQQATAVADRTE 271

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 20/88 (22%)

Query: 16  SPQADIWSLGCTIVEMATGKPPFIELG-SPQAALYRVGFH---------KMHPEIPAELS 65
             ++D++SLGC + E+ TG+PPF   G SP +  Y+   H           H  + A+L 
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQ---HVREDPIPPSARHEGLSADLD 251

Query: 66  DKAKQFILRCFEKDPDKR-ATAGELLED 92
                 +L+   K+P+ R  TA E+  D
Sbjct: 252 A----VVLKALAKNPENRYQTAAEMRAD 275

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 20/126 (15%)

Query: 4   IFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFI-ELGSPQAALYRVGFHKMHPEI-- 60
           +        S Y  + D+WSLG  +  + +G PPF+   GS                +  
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251

Query: 61  ---------PAE----LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSG 107
                    P +    +S  AK  I +   +D  +R +A ++L+ P++       +  + 
Sbjct: 252 SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG----CAPENT 307

Query: 108 LLSPEV 113
           L +P V
Sbjct: 308 LPTPMV 313

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKAKQF 71
           YS Q+D+++ G  + E+ TG+ P+  + +    +  VG   + P   ++ +    + K+ 
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 261

Query: 72  ILRCFEKDPDKRATAGELLE 91
           +  C +K  D+R +   +L 
Sbjct: 262 MAECLKKKRDERPSFPRILA 281

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 11/113 (9%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFI---ELGSPQAALYRVGFHKMHPEIPAE----LSD 66
            Y    D+WSLG  +  +  G PPF              R+         P      +S+
Sbjct: 205 KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR--LGQYGFPNPEWSEVSE 262

Query: 67  KAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKS 119
            AKQ I    + DP +R T  + +  P++    +     + L +  V    K 
Sbjct: 263 DAKQLIRLLLKTDPTERLTITQFMNHPWINQ--SMVVPQTPLHTARVLQEDKD 313

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
           +Y  + D+WS G  +  + +G PPF   G  +  + +    G +         +SD AK 
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFY--GKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTA 100
            I +     P  R TA + LE P++   ++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQKYSS 285

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 60.4 bits (147), Expect = 3e-11
 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%)

Query: 3   VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPE 59
           +I  +    +  Y  + D+WS G  +  +  G PPF      Q  + R    G ++    
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--WHRKQMLMLRMIMSGNYQFGSP 251

Query: 60  IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA 100
              + SD  K  + R     P KR TA E L  PF      
Sbjct: 252 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV 292

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 60.1 bits (146), Expect = 5e-11
 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 19/101 (18%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR------------------VGFHKM 56
              + DIWSLG  +  M     PF    S    L+                      +K 
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPFSLKISLV-ELFNNIRTKNIEYPLDRNHFLYPLTNKK 287

Query: 57  HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD 97
                  LS++   F+     K+P +R T+ + L+  +LAD
Sbjct: 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 60.2 bits (146), Expect = 5e-11
 Identities = 18/113 (15%), Positives = 30/113 (26%), Gaps = 26/113 (23%)

Query: 6   LTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-------------------- 45
           + +      Y    D+WS+G T    ATG  PF     P+                    
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250

Query: 46  ---AALYRVGFHKMHP---EIPAELSDKAKQFILRCFEKDPDKRATAGELLED 92
              A    + +    P    +   L       +    E D +K     +   +
Sbjct: 251 VQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 59.5 bits (145), Expect = 6e-11
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAK 69
             YS   DIW+ G  +  +  G PPF      Q  LY     G +         ++ +AK
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPF--WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLADLTATRS 103
             I      +P KR TA + L+ P++ +     S
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVAS 273

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAK 69
             YS   DIW+ G  +  +  G PPF      Q  LY     G +         ++ +AK
Sbjct: 205 DPYSKPVDIWACGVILYILLVGYPPF--WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLAD 97
             I      +P KR TA + L+ P++ +
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWICN 290

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 26/112 (23%), Positives = 38/112 (33%), Gaps = 26/112 (23%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IE-LGSP----------QAALY 49
           + Y+   D+WS GC + E+  G+P F            I+ LG+P              +
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 291

Query: 50  RVGFHKMHP---EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           +    K HP           +A     R  E  P  R T  E     F  +L
Sbjct: 292 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           +S  +D+++LG    E+   + PF      +A ++++G           +  +    +L 
Sbjct: 220 FSKHSDVFALGTIWYELHAREWPFKTQ-PAEAIIWQMGTGMKPNLSQIGMGKEISDILLF 278

Query: 75  CFEKDPDKRATAGELLEDPFLADLTATRSSSS 106
           C+  + ++R T  +L++   L  L       S
Sbjct: 279 CWAFEQEERPTFTKLMDM--LEKLPKRNRRLS 308

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELG--SPQAALYRV--GFHKMHPEIPAELSDKA 68
             Y    DIWSLG  +  M TG  PF      +P+  L R+  G   +       +SD A
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA 254

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLAD 97
           K  + +    DP +R TA  +L  P++  
Sbjct: 255 KDLVSKMLHVDPHQRLTAALVLRHPWIVH 283

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 5/95 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
                 D+WS+G     + +G  PF   G       R        M     + +S+  K 
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSS 105
           FI +    DP+ R T  + LE P+L    A    S
Sbjct: 390 FIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 424

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPF---IELGSPQAALYRVGFHKMHPEIPAE----LSD 66
            Y    D+WSLG  +  +  G PPF     L        R+       E P      +S+
Sbjct: 174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR--MGQYEFPNPEWSEVSE 231

Query: 67  KAKQFILRCFEKDPDKRATAGELLEDPFLADLTA 100
           + K  I    + +P +R T  E +  P++   T 
Sbjct: 232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 265

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 58.9 bits (143), Expect = 1e-10
 Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 26/112 (23%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IE-LGSP--------QAALYRV 51
           ++Y+   DIWS GC + E+  G+P F            I+ LG+P               
Sbjct: 217 TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH 276

Query: 52  GFHKMHPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
            F ++ P              A   I R  E  P  R TA E L  PF  +L
Sbjct: 277 KFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 58.9 bits (143), Expect = 1e-10
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAK 69
             Y    D+W+ G  +  +  G PPF      Q  LY+    G +         ++ +AK
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPFW--DEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLAD 97
             I +    +P KR TA E L+ P+++ 
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWISH 273

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 30/138 (21%), Positives = 42/138 (30%), Gaps = 41/138 (29%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----------IE--LGSPQAALYRVG-----FHKM 56
           ++   D+WS+GC + E   G   F           +E  LG   + +         F+K 
Sbjct: 216 WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKG 275

Query: 57  HPEIPAELSDKAKQ-----------------------FILRCFEKDPDKRATAGELLEDP 93
                   SD                            + R  E DP +R T  E L  P
Sbjct: 276 GLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHP 335

Query: 94  FLADLTATRSSSSGLLSP 111
           F A LT    S     +P
Sbjct: 336 FFAGLTPEERSFHTSRNP 353

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 28/108 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSP---------QAALYR-V 51
           Y    D+W++GC + EM  G+P F     I+        LG+          +  ++  V
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261

Query: 52  GFHKMHPEIPAE-----LSDKAKQFILRCFEKDPDKRATAGELLEDPF 94
              ++    P E     LS+       +C   DPDKR    ELL   F
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 5/95 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
               +AD+WS+G     + +G  PF  LG  +           ++   E  +  S  AK 
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSAVNYEFEDEYFSNTSALAKD 250

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSS 105
           FI R   KDP KR T  + L+ P++      ++ S
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALS 285

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 58.7 bits (142), Expect = 2e-10
 Identities = 13/85 (15%), Positives = 25/85 (29%), Gaps = 24/85 (28%)

Query: 16  SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH-------PEIPAELSDKA 68
           +   DI+++G T+  +    P               G +           +         
Sbjct: 254 TVATDIYTVGRTLAALTLDLPTR------------NGRYVDGLPEDDPVLKTYDSYGR-- 299

Query: 69  KQFILRCFEKDPDKR-ATAGELLED 92
              + R  + DP +R  TA E+   
Sbjct: 300 --LLRRAIDPDPRQRFTTAEEMSAQ 322

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 26/110 (23%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSP---------QAALYRVG 52
           YS   DIWS+GC   EM  G P F      +        LG+P         +   Y   
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237

Query: 53  FHKMHPEIPAE----LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           F    P         L +     + +  + DP++R TA + LE  +  + 
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 5/96 (5%)

Query: 3   VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPE 59
           ++  +    +  Y  + D+W+ G  +  +  G PPF      Q  + R    G ++    
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF--WHRRQILMLRMIMEGQYQFSSP 327

Query: 60  IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
              + S   K  I R  + DP+ R TA + L+ PF 
Sbjct: 328 EWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 5/100 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
               +AD+WS+G     + +G  PF  LG  +           +    E  +  S+ AK 
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLS 110
           FI +   K+  KR T  E L  P++  +   ++       
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV 291

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 5/100 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
               +AD+WS+G     + +G  PF  LG  +           +    E  ++ S+ AK 
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLS 110
           FI +   K+  KR T  E L  P++  +   ++       
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESV 291

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 5/95 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY---RVGFHKMHPEIPAELSDKAKQ 70
                 D+W++G     + +G  PF   G          +    +   +  + +S +AK 
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPF--AGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTATRSSS 105
           FI    +K+P KR T  + LE P+L    +  +S 
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSR 318

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 57.3 bits (139), Expect = 4e-10
 Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 47/140 (33%)

Query: 2   NVIFLTQYSV------------NSSYSPQADIWSLGCTIVEMATGKPPF----------- 38
           +   L++  V             ++Y+   D+W+ GC   EM TGK  F           
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL 236

Query: 39  -IE-LGSP----------QAALY--------RVGFHKMHPEIPAELSDKAKQFILRCFEK 78
            +E +                +Y             ++ P I  E  D    F+ +    
Sbjct: 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD----FLEQILTF 292

Query: 79  DPDKRATAGELLEDPFLADL 98
            P  R TA E L  P+++  
Sbjct: 293 SPMDRLTAEEALSHPYMSIY 312

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 57.2 bits (139), Expect = 5e-10
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 7/96 (7%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE----LSDKAK 69
             S   D+WSLG  +  + +G  PF  L      +              E    +S +A 
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPF--LAETNQQIIE-NIMNAEYTFDEEAFKEISIEAM 235

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLADLTATRSSS 105
            F+ R   K+   R TA E L+ P+L       S+ 
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTK 271

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 57.4 bits (139), Expect = 5e-10
 Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 26/112 (23%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IE-LGSP----------QAALY 49
           + Y+P  D+WS+GC   E+  GKP F            I+ +G+P               
Sbjct: 217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276

Query: 50  RVGFHKMHP---EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           R    K       +P      A   + +    +PD R    E +  PF   L
Sbjct: 277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL 328

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 56.8 bits (138), Expect = 6e-10
 Identities = 29/115 (25%), Positives = 41/115 (35%), Gaps = 31/115 (26%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSP---------QAALYRVG 52
           YS   DIWS GC + EM TGKP F      E        +G+P         +   Y   
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN 245

Query: 53  FHKMHP---------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
             +  P              L      F+    + +PD R +A + L  P+ A+ 
Sbjct: 246 IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 56.8 bits (138), Expect = 6e-10
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 26/110 (23%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAA---------LYRVG 52
           YS   DIWSLGC   EM T +  F     I+        LG+P             Y+  
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240

Query: 53  FHKMHP----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           F K       ++   L +  +  + +    DP+KR +A   L  PF  D+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 56.8 bits (138), Expect = 6e-10
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQ 70
               +AD+WS+G     + +G  PF  LG  +           +    E  +  S+ AK 
Sbjct: 187 PLGLEADMWSIGVITYILLSGASPF--LGETKQETLTNISAVNYDFDEEYFSNTSELAKD 244

Query: 71  FILRCFEKDPDKRATAGELLEDPFLADLTA 100
           FI R   KDP +R T  + LE  ++  +  
Sbjct: 245 FIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 56.7 bits (137), Expect = 8e-10
 Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 11/107 (10%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPF---IELGSPQAALYRVGFHKMHPEIPAE----LSD 66
            Y    D+WSLG  +  +  G PPF     L        R+       E P      +S+
Sbjct: 239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR--MGQYEFPNPEWSEVSE 296

Query: 67  KAKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEV 113
           + K  I    + +P +R T  E +  P++    +T+   + L +  V
Sbjct: 297 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ--STKVPQTPLHTSRV 341

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 56.5 bits (137), Expect = 9e-10
 Identities = 26/122 (21%), Positives = 37/122 (30%), Gaps = 41/122 (33%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----------IE--LGSPQAALYRVG-----FHKM 56
           +S   D+WS+GC ++E   G   F           +E  LG     + +       FH  
Sbjct: 211 WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHD 270

Query: 57  HPEIPAELSDKAK-----------------------QFILRCFEKDPDKRATAGELLEDP 93
             +     S                             I +  E DP KR T  E L+ P
Sbjct: 271 RLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHP 330

Query: 94  FL 95
           F 
Sbjct: 331 FF 332

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 29/118 (24%), Positives = 42/118 (35%), Gaps = 36/118 (30%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IEL------------GSPQAAL 48
             Y+   DIWS+GC + EM TGK  F            +++                A  
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258

Query: 49  Y--------RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           Y        R  F ++ P    + +D     + +  E D DKR TA + L  PF    
Sbjct: 259 YIQSLPQTPRKDFTQLFPRASPQAAD----LLEKMLELDVDKRLTAAQALTHPFFEPF 312

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAKQF 71
            +   D+W++G     + T   PF  +G      Y            E  + +S  A  F
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSPF--VGEDNQETYLNISQVNVDYSEETFSSVSQLATDF 267

Query: 72  ILRCFEKDPDKRATAGELLEDPFLADLTAT 101
           I     K+P+KR TA   L   +L      
Sbjct: 268 IQSLLVKNPEKRPTAEICLSHSWLQQWDFE 297

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 24/110 (21%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQ-------AALYRVG 52
           S+Y+   D+WS+GC   EM   KP F      +        +G P         +L R  
Sbjct: 194 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGA 253

Query: 53  FHKMHPEIPAE----LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           F    P         + +   Q +L     +P KR +A   L+  +L   
Sbjct: 254 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)

Query: 15  YSPQADIWSLG--CTIVEMATGKPPFIELGSPQAALYR---VGFHKMHPEIPAELSDKAK 69
            S   D+WS+G    +  + +G  PF  LG   A            +  E   ++S++AK
Sbjct: 265 VSFPTDMWSVGVIAYM--LLSGLSPF--LGDNDAETLNNILACRWDLEDEEFQDISEEAK 320

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLL 109
           +FI +   K+   R +A E L+ P+L+D       S+   
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQKK 360

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 36/118 (30%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IEL------------GSPQAAL 48
             Y+   DIWS+GC + EM TGK  F            +++             S +A  
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260

Query: 49  Y--------RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           Y        +  F  +         +     + +    D ++R TAGE L  P+   L
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVN----LLEKMLVLDAEQRVTAGEALAHPYFESL 314

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 24/110 (21%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQ-------AALYRVG 52
           SSY+   D+WS+GC   EM   KP F     ++        +G P         AL R  
Sbjct: 194 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 253

Query: 53  FHKMHPEIPAE----LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           FH    +   +    + +  K  +L+C   +P KR +A   L  P+  DL
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 31/144 (21%), Positives = 47/144 (32%), Gaps = 50/144 (34%)

Query: 5   FLTQYSV-----------NSSYSPQADIWSLGCTIVEMATGKPPF------------IE- 40
            +T Y V              Y    DIWS+GC + EM   K  F            IE 
Sbjct: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278

Query: 41  LGSP----------QAALY--------RVGFHKMHP--------EIPAELSDKAKQFILR 74
           LG+P              Y         + F K+ P        E     + +A+  + +
Sbjct: 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 338

Query: 75  CFEKDPDKRATAGELLEDPFLADL 98
               DP KR +  + L+ P++   
Sbjct: 339 MLVIDPAKRISVDDALQHPYINVW 362

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 43/124 (34%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----------IE--LGSPQAALYRVG--------F 53
           +   +D+WS GC + E+ TG   F           +E  +      +             
Sbjct: 236 WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYV 295

Query: 54  HKMHPEIPAELSDKAKQ----------------------FILRCFEKDPDKRATAGELLE 91
           +K   ++    +  +                        F+    + DP  R +  ELL+
Sbjct: 296 NKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355

Query: 92  DPFL 95
             FL
Sbjct: 356 HKFL 359

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 31/144 (21%), Positives = 45/144 (31%), Gaps = 50/144 (34%)

Query: 5   FLTQYSV-----------NSSYSPQADIWSLGCTIVEMATGKPPF------------IE- 40
            +T Y V              Y    DIWS+GC + EM  G   F            IE 
Sbjct: 182 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 241

Query: 41  LGSP----------QAALY--------RVGFHKMHP--------EIPAELSDKAKQFILR 74
           LG+P              Y           F K+ P        E     + +A+  + +
Sbjct: 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 301

Query: 75  CFEKDPDKRATAGELLEDPFLADL 98
               D  KR +  E L+ P++   
Sbjct: 302 MLVIDASKRISVDEALQHPYINVW 325

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF-IELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
             +Y   AD +SLGC + ++  G  PF       +  + R+       E+P   S + + 
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-AVELPDSFSPELRS 423

Query: 71  FILRCFEKDPDKR-----ATAGELLEDPFLADL 98
            +    ++D ++R       A E+ E PF   L
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 49/139 (35%)

Query: 5   FLTQYSV------------NSSYSPQADIWSLGCTIVEMATGKPPF------------IE 40
            + ++              ++ YS   D+WS GC + E+   +P F              
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237

Query: 41  L-------------GSPQAALY--------RVGFHKMHPEIPAELSDKAKQFILRCFEKD 79
           +              SP+A  Y             KM P +  +  D     + R    D
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGID----LLQRMLVFD 293

Query: 80  PDKRATAGELLEDPFLADL 98
           P KR TA E LE P+L   
Sbjct: 294 PAKRITAKEALEHPYLQTY 312

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 25/118 (21%), Positives = 38/118 (32%), Gaps = 36/118 (30%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IEL------------GSPQAAL 48
             Y+   DIWS+GC + E+ TG+  F            + L             S  A  
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264

Query: 49  Y--------RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           Y        ++ F  +         D     + +    D DKR TA + L   + A  
Sbjct: 265 YIQSLTQMPKMNFANVFIGANPLAVD----LLEKMLVLDSDKRITAAQALAHAYFAQY 318

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 48/141 (34%)

Query: 2   NVIFLTQYSV------------NSSYSPQADIWSLGCTIVEMATGKPPF----------- 38
           +  FLT+Y              +  Y+   DIWS+GC + EM + +P F           
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 243

Query: 39  -IEL------------GSPQAALY--------RVGFHKMHPEIPAELSDKAKQFILRCFE 77
            + +             + +A  Y        +V ++++ P   ++  D     + +   
Sbjct: 244 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALD----LLDKMLT 299

Query: 78  KDPDKRATAGELLEDPFLADL 98
            +P KR    + L  P+L   
Sbjct: 300 FNPHKRIEVEQALAHPYLEQY 320

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA--LYRVGFHKMHPEIPAELSDKAK 69
           N  Y+   D W+LGC + EM  G+ PF +         + R+       E     S +A+
Sbjct: 359 NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PEEYSERFSPQAR 417

Query: 70  QFILRCFEKDPDKR-----ATAGELLEDPFLADL 98
               +   KDP +R      +A E+ E P    L
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 37/119 (31%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPF------------IEL------------GSPQAAL 48
             ++   D+WS GC + EM   K  F            +E+             SP A  
Sbjct: 209 KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARD 268

Query: 49  Y---------RVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           Y            +  + P       D     I +  E +P +R +  + L  P+   L
Sbjct: 269 YLRNSLSNVPARAWTAVVPTADPVALD----LIAKMLEFNPQRRISTEQALRHPYFESL 323

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPA--ELSDKAKQFILR 74
              D+W++G T+     G+ PF++       L+         E P   ++++  K  I R
Sbjct: 219 KALDVWAMGVTLYCFVFGQCPFMDERIM--CLHSK-IKSQALEFPDQPDIAEDLKDLITR 275

Query: 75  CFEKDPDKRATAGELLEDPFL 95
             +K+P+ R    E+   P++
Sbjct: 276 MLDKNPESRIVVPEIKLHPWV 296

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 15/137 (10%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM---HPEIPAELSDKAKQFIL 73
           P+ D+WSLG  +  + +G  PF   G     L      ++      IP  +S   +  + 
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFD--GQNLKELRE----RVLRGKYRIPFYMSTDCENLLK 246

Query: 74  RCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKK-DS 132
           R    +P KR T  ++++D ++             L P V       +Q R  +      
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWI-----NAGHEEDELKPFVEPELDISDQKRIDIMVGMGY 301

Query: 133 QRRITLSGVLDQDRDHI 149
            +      +     D I
Sbjct: 302 SQEEIQESLSKMKYDEI 318

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF--IELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           +    D WSLG  + E+ TG  PF      + QA + R       P  P E+S  AK  I
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDLI 297

Query: 73  LRCFEKDPDKR-----ATAGELLEDPFLADL 98
            R   KDP KR       A E+ E  F   +
Sbjct: 298 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 53.8 bits (130), Expect = 6e-09
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
             S    +D+W+LGC I ++  G PPF      +  +++        + P +   KA+  
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF--RAGNEYLIFQKIIKL-EYDFPEKFFPKARDL 262

Query: 72  ILRCFEKDPDKRATAG 87
           + +    D  KR    
Sbjct: 263 VEKLLVLDATKRLGCE 278

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 53.7 bits (130), Expect = 7e-09
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 27/111 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAA---------LYRVG 52
           YS   DIWS+GC   EM TGKP F      +        LG+P            L++  
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256

Query: 53  FHKMHPEIPAE-----LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
             ++  + P          +    +      DP+KR +A + +  P+  DL
Sbjct: 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 54.0 bits (130), Expect = 7e-09
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 9/79 (11%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCF 76
           P+ ++WSLG T+  +   + PF EL     A             P  +S +    +    
Sbjct: 209 PELEMWSLGVTLYTLVFEENPFCELEETVEAAIH---------PPYLVSKELMSLVSGLL 259

Query: 77  EKDPDKRATAGELLEDPFL 95
           +  P++R T  +L+ DP++
Sbjct: 260 QPVPERRTTLEKLVTDPWV 278

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA--LYRVGFHKMHPEIPAELSDKAK 69
              Y    D ++LG T+ EM   + PF   G       L +    +     P + S  +K
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ-AVTYPDKFSPASK 421

Query: 70  QFILRCFEKDPDKR-----ATAGELLEDPFLADL 98
            F     +KDP+KR      +   L   P   D+
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           ++   D WSLG  + +M TG PPF   G  +              +P  L+ +A+  + +
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPF--TGENRKKTIDKILKC-KLNLPPYLTQEARDLLKK 254

Query: 75  CFEKDPDKR-----ATAGELLEDPFLADL 98
             +++   R       AGE+   PF   +
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHI 283

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 4/88 (4%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              Y+   D WS G  + EM  G+ PF   G  +  L+       +P  P  L  +AK  
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHSIRMD-NPFYPRWLEKEAKDL 248

Query: 72  ILRCFEKDPDKRATAG-ELLEDPFLADL 98
           +++ F ++P+KR     ++ + P   ++
Sbjct: 249 LVKLFVREPEKRLGVRGDIRQHPLFREI 276

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           ++  AD WS G  + EM TG  PF   G  +     +        +P  LS +A+  +  
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTMILKA-KLGMPQFLSPEAQSLLRM 259

Query: 75  CFEKDPDKR-----ATAGELLEDPFLADL 98
            F+++P  R         E+    F + +
Sbjct: 260 LFKRNPANRLGAGPDGVEEIKRHSFFSTI 288

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y    D W LG  + EM  G PPF       A +Y    +K   ++   +++ A+  +  
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPF--YSRNTAEMYDNILNK-PLQLKPNITNSARHLLEG 272

Query: 75  CFEKDPDKR----ATAGELLEDPFLADL 98
             +KD  KR        E+    F + +
Sbjct: 273 LLQKDRTKRLGAKDDFMEIKSHVFFSLI 300

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 9/79 (11%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCF 76
             A +WSLG  + +M  G  PF                         +S + +  I  C 
Sbjct: 228 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF---------FRQRVSSECQHLIRWCL 278

Query: 77  EKDPDKRATAGELLEDPFL 95
              P  R T  E+   P++
Sbjct: 279 ALRPSDRPTFEEIQNHPWM 297

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 3/84 (3%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP-AELSDKAKQFILRC 75
              D+WS G  +  M  G+ P+ +        Y     K     P  ++       + + 
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKEKKTYLNPWKKIDSAPLALLHKI 245

Query: 76  FEKDPDKRATAGELLEDP-FLADL 98
             ++P  R T  ++ +D  +   L
Sbjct: 246 LVENPSARITIPDIKKDRWYNKPL 269

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 27/119 (22%), Positives = 39/119 (32%), Gaps = 35/119 (29%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIE--------------LGSPQAALY----------- 49
           Y    D+WSLGC +  M   K PF                LG+     Y           
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267

Query: 50  ---------RVGFHKM-HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
                    R  + +  H E    +S +A  F+ +    D   R TA E +E P+   +
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA-------LYRVGFHKMHPEIPAELS 65
             Y    D W+LG  + EM  G+ PF  +GS           L++V   K    IP  LS
Sbjct: 185 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLS 243

Query: 66  DKAKQFILRCFEKDPDKR 83
            KA   +     KDP +R
Sbjct: 244 VKAASVLKSFLNKDPKER 261

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 13/110 (11%), Positives = 31/110 (28%), Gaps = 7/110 (6%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAAL---YRVGFHKMHPEIPAELSDKAKQFIL 73
              D+WS G  +  M  G+ P+ +                +    +   ++       + 
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK---KIDSAPLALLH 243

Query: 74  RCFEKDPDKRATAGELLEDP-FLADLTATRSSSSGLLSPEVNLNSKSPEQ 122
           +   ++P  R T  ++ +D  +   L                  S   + 
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKH 293

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 27/111 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSP---------QAALYRVG 52
           YS Q D+W +GC   EMATG+P F      E        LG+P             ++  
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237

Query: 53  FHKMHPEIP-----AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
            +  +           L       + +  + +   R +A + ++ PF   L
Sbjct: 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 51.6 bits (124), Expect = 4e-08
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA-------LYRVGFHKMHPEIPAELS 65
             Y    D W+LG  + EM  G+ PF  +GS           L++V   K    IP  LS
Sbjct: 228 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLS 286

Query: 66  DKAKQFILRCFEKDPDKR 83
            KA   +     KDP +R
Sbjct: 287 VKAASVLKSFLNKDPKER 304

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
           + Y    D W LG  + EM  G+ PF         L+ +   +     P  LS +AK  +
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILME-EIRFPRTLSPEAKSLL 236

Query: 73  LRCFEKDPDKR-----ATAGELLEDPFLADL 98
               +KDP +R     + A E++E  F   +
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 51.6 bits (124), Expect = 5e-08
 Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM---HPEIPAE--LSDKAKQF 71
             AD+WS G T+  M  G  PF +   P    YR    ++      IP +  +S +    
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPFEDPEEP--RDYRKTIQRILSVKYSIPDDIRISPECCHL 254

Query: 72  ILRCFEKDPDKRATAGELLEDP-FLADLTATRSSSSGLLSPEVNLNSKSPEQDR 124
           I R F  DP  R +  E+     FL +L A   + S   S            D 
Sbjct: 255 ISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDT 308

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 51.1 bits (123), Expect = 5e-08
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCF 76
            + DIWS G T+  + TG  PF   G     L+     K    IP +        +    
Sbjct: 192 FKVDIWSAGVTLYNITTGLYPFE--GDNIYKLFEN-IGKGSYAIPGDCGPPLSDLLKGML 248

Query: 77  EKDPDKRATAGELLEDPFL 95
           E +P KR +  ++ +  + 
Sbjct: 249 EYEPAKRFSIRQIRQHSWF 267

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 51.7 bits (124), Expect = 5e-08
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 8/92 (8%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           ++ Y    D W LG  + EM  G+ PF         L+ +   +     P  L  +AK  
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILME-EIRFPRTLGPEAKSL 379

Query: 72  ILRCFEKDPDKR-----ATAGELLEDPFLADL 98
           +    +KDP +R       A E+++  F A +
Sbjct: 380 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 50.8 bits (122), Expect = 7e-08
 Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 9/77 (11%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCF 76
             A +WSLG  + +M  G  PF        A             PA +S      I RC 
Sbjct: 218 LPATVWSLGILLYDMVCGDIPFERDQEILEAELH---------FPAHVSPDCCALIRRCL 268

Query: 77  EKDPDKRATAGELLEDP 93
              P  R +  E+L DP
Sbjct: 269 APKPSSRPSLEEILLDP 285

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 50.7 bits (122), Expect = 7e-08
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCF 76
           P+ DIWS G  +  +  G  PF +   P   L++         IP  L+      ++   
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKK-IRGGVFYIPEYLNRSVATLLMHML 246

Query: 77  EKDPDKRATAGELLEDPFL 95
           + DP KRAT  ++ E  + 
Sbjct: 247 QVDPLKRATIKDIREHEWF 265

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 56/150 (37%)

Query: 5   FLTQYSV------------NSSYSPQADIWSLGCTIVEMATGKPPF-------------- 38
            LT Y              ++ Y+   D+WSLGC + E+  GKP F              
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245

Query: 39  ----------IELGSPQAALY--------RVGFHKMHPEIP------------AELSDKA 68
                       + SP A            +                      A+ +++A
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305

Query: 69  KQFILRCFEKDPDKRATAGELLEDPFLADL 98
              + +  + +P+KR +A + L+ PF++  
Sbjct: 306 LDLLDKLLQFNPNKRISANDALKHPFVSIF 335

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCF 76
           P+ D+WS G  +  M  G+ PF +   P   L++   +     +P  LS  A+  I R  
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEFIPN--LFKK-VNSCVYVMPDFLSPGAQSLIRRMI 243

Query: 77  EKDPDKRATAGELLEDPFL 95
             DP +R T  E+  DP+ 
Sbjct: 244 VADPMQRITIQEIRRDPWF 262

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 19/99 (19%)

Query: 12  NSSYSPQADIWSLGCTIVEMATG----------KPPFIELGSPQAALYR----VGFHKMH 57
                 + DIW+ G  + E+A            KPPF ++     +       V   +  
Sbjct: 197 CFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQR 256

Query: 58  PEIPAELSDKA-----KQFILRCFEKDPDKRATAGELLE 91
           P IP             + +  C+ ++P  R TA  + +
Sbjct: 257 PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
             Y P  D W++G  + EM  G  PF      +  L+           P  L + A   +
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPF--EAENEDDLFEA-ILNDEVVYPTWLHEDATGIL 255

Query: 73  LRCFEKDPDKR 83
                K+P  R
Sbjct: 256 KSFMTKNPTMR 266

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 4   IFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY-RVGFHKMH---PE 59
           I          Y P+ D WSLG  + EM  G+ PF          Y ++  HK     P 
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF--YAESLVETYGKIMNHKERFQFPT 304

Query: 60  IPAELSDKAKQFILRCFEKDPDKR 83
              ++S+ AK  I R      + R
Sbjct: 305 QVTDVSENAKDLI-RRLICSREHR 327

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 14/80 (17%), Positives = 26/80 (32%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
             SY  + D++S G  + E+        +               +    P          
Sbjct: 196 GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPI 255

Query: 72  ILRCFEKDPDKRATAGELLE 91
            +RC + DP+KR +  +L  
Sbjct: 256 TVRCCDLDPEKRPSFVKLEH 275

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
             Y    D W+ G  + EM  G+ PF   G  +  L++      +   P  +S +A    
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPF--EGEDEDELFQSIMEH-NVAYPKSMSKEAVAIC 252

Query: 73  LRCFEKDPDKRATAGE 88
                K P KR   G 
Sbjct: 253 KGLMTKHPGKRLGCGP 268

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 26/143 (18%)

Query: 17  PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAELSDKAKQFIL 73
           P+ DIWS G  +  +  G  PF         L++    K+       P  L+      + 
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFD--DDHVPTLFK----KICDGIFYTPQYLNPSVISLLK 248

Query: 74  RCFEKDPDKRATAGELLEDP-FLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDS 132
              + DP KRAT  ++ E   F  DL                     PE   +     D 
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQDLP----------------KYLFPEDPSYSSTMIDD 292

Query: 133 QRRITLSGVLDQDRDHICQVWLK 155
           +    +    +   + +      
Sbjct: 293 EALKEVCEKFECSEEEVLSCLYN 315

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           +  Y+   D W+LG  I EMA G PPF         +Y           P+  S   K  
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFF--ADQPIQIYEKIVSGK-VRFPSHFSSDLKDL 268

Query: 72  ILRCFEKDPDKR 83
           +    + D  KR
Sbjct: 269 LRNLLQVDLTKR 280

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 8/91 (8%)

Query: 13  SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFI 72
             Y    D W+ G  + EM  G+ PF   G  +  L++      +   P  +S +A    
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPF--EGEDEDELFQSIMEH-NVAYPKSMSKEAVAIC 573

Query: 73  LRCFEKDPDKR-----ATAGELLEDPFLADL 98
                K P KR         ++ E  F   +
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 29/137 (21%), Positives = 38/137 (27%), Gaps = 56/137 (40%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----------IE--LGSPQAALYRVG--------- 52
           Y    D+WSLGC + E+ TG P             +   LG P   L             
Sbjct: 276 YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSS 335

Query: 53  --------------------------FHKMHPEIPAELSDKAK-----QFI---LRCFEK 78
                                          P    E  +  K      F+    +C E 
Sbjct: 336 KGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEW 395

Query: 79  DPDKRATAGELLEDPFL 95
           DP  R T G+ L  P+L
Sbjct: 396 DPAVRMTPGQALRHPWL 412

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 48.6 bits (116), Expect = 5e-07
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 44/128 (34%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF--------------------I--ELGSP-------- 44
           Y+   DIW++GC   E+ T +P F                    I   +G P        
Sbjct: 213 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDI 272

Query: 45  --------------QAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELL 90
                         +         K   +   +   KA   + +    DP KR T+ + +
Sbjct: 273 KKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332

Query: 91  EDPFLADL 98
           +DP+  + 
Sbjct: 333 QDPYFLED 340

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 22/112 (19%), Positives = 30/112 (26%), Gaps = 29/112 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAA---------LYR-V 51
           Y P  D+W  GC + EM T  P                  GS             LY  +
Sbjct: 206 YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL 265

Query: 52  GFHKMHPEIPAE------LSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD 97
              K       +          A   I +    DP +R  + + L   F   
Sbjct: 266 ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 17/107 (15%), Positives = 28/107 (26%), Gaps = 21/107 (19%)

Query: 14  SYSPQADIWSLGCTIVEMATGKPPFIELGSPQ--------------------AALYRVGF 53
            Y+   D WS G    E  TG  PF+    P                         +   
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS 258

Query: 54  HKMHPE-IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
               P  +   L+ K ++++         +R T  +         L 
Sbjct: 259 VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALD 305

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 47.9 bits (115), Expect = 5e-07
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 27/111 (24%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPF-----IE--------LGSP---------QAALYRV 51
           YS   D+WS GC   E+A  G+P F      +        LG+P         +   Y+ 
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238

Query: 52  GFHKMHPEIPAE----LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
                           L+   +  +    + +P +R +A E L+ P+ +D 
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 48.3 bits (116), Expect = 5e-07
 Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 27/110 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----IE--------LGSPQAALYRVGFHKM----- 56
           Y    D+W++GC + E+    P       ++        LG+P    +      +     
Sbjct: 190 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP-DMCSLPDYVT 248

Query: 57  ---HPEIP-----AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
               P IP     +   D     I   F  +P  R TA + L+  + ++ 
Sbjct: 249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 29/142 (20%), Positives = 36/142 (25%), Gaps = 61/142 (42%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----------IE--LGSPQAALYRVG------FHK 55
           Y    D+WSLGC +VEM TG+P F           I   LG P A +          F K
Sbjct: 235 YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEK 294

Query: 56  ---------------------------------------MHPEIPAELSDKAKQFI---L 73
                                                                +F    L
Sbjct: 295 LPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLIL 354

Query: 74  RCFEKDPDKRATAGELLEDPFL 95
           R  + DP  R      L+  F 
Sbjct: 355 RMLDYDPKTRIQPYYALQHSFF 376

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 48.3 bits (116), Expect = 6e-07
 Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 15/78 (19%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY------RVGFHKMHPEIPAELS 65
              Y+   D WS G  I EM  G  PF    S     Y       + F       P   +
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPF--YDSNTMKTYEKILNAELRF-------PPFFN 227

Query: 66  DKAKQFILRCFEKDPDKR 83
           +  K  + R   +D  +R
Sbjct: 228 EDVKDLLSRLITRDLSQR 245

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 47.8 bits (114), Expect = 8e-07
 Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 23/110 (20%)

Query: 3   VIFLTQYSVNSSYSPQADIWSLGCTIV--EMATG----------KPPFIELGSPQAALYR 50
           V+  +    +      AD++S G  ++  E+A            + P+ +L     +   
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFG--LILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYED 274

Query: 51  ----VGFHKMHPEIPAELSDKA-----KQFILRCFEKDPDKRATAGELLE 91
               V   K+ P  P   S         + +  C+  +P  R TA  + +
Sbjct: 275 MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 10/94 (10%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR-VGFHKMH---PEIPAELSDK 67
             SY P+ D W+LG    EM  G+ PF       A  Y  +  +K H   P +   + ++
Sbjct: 244 TGSYGPECDWWALGVFAYEMFYGQTPF--YADSTAETYGKIVHYKEHLSLPLVDEGVPEE 301

Query: 68  AKQFILRCFEKDPDKR---ATAGELLEDPFLADL 98
           A+ FI +     P+ R     AG+    PF   L
Sbjct: 302 ARDFI-QRLLCPPETRLGRGGAGDFRTHPFFFGL 334

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 6   LTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP--AE 63
           L     +  Y  + D WS+G  + EM  G  PF    S      ++  HK     P   +
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDND 299

Query: 64  LSDKAKQFILRCFEKDPDKR 83
           +S +AK  I   F  D + R
Sbjct: 300 ISKEAKNLI-CAFLTDREVR 318

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 19/108 (17%)

Query: 3   VIFLTQYSVNSSYSPQADIWSLGCTIVEMATG----------KPPFIELGSPQAALYR-- 50
           V+  +    +     +ADI+++G    E+A            + P+ +L     ++    
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 281

Query: 51  --VGFHKMHPEIPAELSD-----KAKQFILRCFEKDPDKRATAGELLE 91
             V   K+ P IP             + +  C+  +   R TA  + +
Sbjct: 282 KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 20/102 (19%)

Query: 10  SVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR---------------VGFH 54
           +       + D++++G  + E+A+               +                V   
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHK 269

Query: 55  KMHPEIPAELSDKA-----KQFILRCFEKDPDKRATAGELLE 91
           K  P +       A      + I  C++ D + R +AG + E
Sbjct: 270 KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 10/87 (11%), Positives = 26/87 (29%), Gaps = 11/87 (12%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK---- 67
           N  ++ Q D + +  T+  M  G    ++    +     +     H ++  E        
Sbjct: 259 NKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNI 318

Query: 68  -------AKQFILRCFEKDPDKRATAG 87
                  +   + +  +K   +  T  
Sbjct: 319 PDCHHLPSLDLLRQKLKKVFQQHYTNK 345

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 2e-04
 Identities = 36/252 (14%), Positives = 67/252 (26%), Gaps = 80/252 (31%)

Query: 20  DIWS--------LGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           ++ +        L C I+ + T      +  S     +    H      P E     K  
Sbjct: 252 NVQNAKAWNAFNLSCKIL-LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE----VKSL 306

Query: 72  ILRCFEKDPDK------------RATAGELLED----------PFLADLTATRSSSSGLL 109
           +L+  +  P               +   E + D               LT    SS  +L
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366

Query: 110 SPEVNLNSKSPEQDRFYLC---KKDSQRRITLSGVLDQDRDHICQVWLKCIQRDVDD--- 163
            P          +  F         +   I  + +L         +W   I+ DV     
Sbjct: 367 EPAE-------YRKMFDRLSVFPPSA--HIP-TILL-------SLIWFDVIKSDVMVVVN 409

Query: 164 -----CLLSK-----------AHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVA 207
                 L+ K            +LE+ ++   +N     +S ++           FDS  
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVK--LENEYALHRSIVD----HYNIPKTFDSDD 463

Query: 208 INQIHFAIYLFH 219
           +   +   Y + 
Sbjct: 464 LIPPYLDQYFYS 475

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 28/165 (16%), Positives = 48/165 (29%), Gaps = 71/165 (43%)

Query: 5   FLTQYSV------------NSSYSPQADIWSLGCTIVEM-----------ATGKPPF--- 38
            LT + V              +Y+   D+WS+GC   E+           A   P F   
Sbjct: 239 QLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGS 298

Query: 39  --------IELGSPQAALYRVGFHKMH-----------PEIPAELSDKAKQFILRC---- 75
                    + G+      R    +++            +I A   + AK++I       
Sbjct: 299 SCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKRE 358

Query: 76  ---FEK-------------------DPDKRATAGELLEDPFLADL 98
                +                   +P+KR T  E L  PF  ++
Sbjct: 359 GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 23/162 (14%), Positives = 42/162 (25%), Gaps = 68/162 (41%)

Query: 5   FLTQYSV------------NSSYSPQADIWSLGCTIVEMATG-----------KPPF--- 38
            LT + V              +Y+   DIWS GC   E+               P F   
Sbjct: 207 QLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGS 266

Query: 39  --IELGSPQAALYRVGFHKMH--------------PEIPAELSDKAKQFILRC------- 75
               L   + +                         ++      +  ++I          
Sbjct: 267 SCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN 326

Query: 76  FEK-------------------DPDKRATAGELLEDPFLADL 98
            ++                   +P+KR T  + L+ P+L D+
Sbjct: 327 LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 4/115 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           Y+ Q+D+WS G  + E+ T G  P+  +   +        H+M  + P+  +++    + 
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM--DKPSNCTNELYMMMR 327

Query: 74  RCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLC 128
            C+   P +R T  +L+ED     +  T +   G      + +   P  +  Y  
Sbjct: 328 DCWHAVPSQRPTFKQLVED-LDRIVALTSNQEMGYYHHHHHHDYDIPTTENLYFN 381

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	222
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.91
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.91
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.9
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.9
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.9
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.89
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.88
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.88
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.88
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.88
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.87
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.87
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.86
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.86
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.85
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.84
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.83
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.83
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.83
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.83
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.82
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.82
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.82
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.82
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.82
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.81
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.81
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.81
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.81
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.81
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.8
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.8
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.8
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.8
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.8
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.79
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.79
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.79
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.79
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.79
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.79
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.79
3niz_A	311	Rhodanese family protein; structural genomics, str	99.79
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.79
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.78
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.78
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.78
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.78
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.78
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.78
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.78
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.78
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.78
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.78
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.77
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.77
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.77
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.77
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.77
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.77
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.77
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.77
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.77
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.77
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.77
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.77
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.77
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.77
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.77
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.77
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.76
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.76
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.76
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.76
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.76
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.76
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.76
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.76
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.76
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.76
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.76
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.76
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.76
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.76
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.76
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.76
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.75
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.75
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.75
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.75
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.75
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.75
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.75
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.75
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.75
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.75
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.75
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.75
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.75
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.75
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.75
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.75
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.75
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.75
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.75
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.75
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.74
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.74
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.74
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.74
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.74
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.74
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.74
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.74
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.74
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.74
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.74
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.74
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.74
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.74
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.74
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.73
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.73
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.73
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.73
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.73
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.73
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.73
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.72
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.72
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.72
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.72
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.72
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.72
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.72
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.72
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.72
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.72
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.71
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.71
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.71
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.71
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.71
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.71
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.7
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.7
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.7
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.7
3bhy_A	283	Death-associated protein kinase 3; death associate	99.7
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.7
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.69
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.68
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.68
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.68
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.68
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.67
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.67
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.66
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.66
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.65
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.65
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.65
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.65
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.65
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.64
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.64
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.64
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.64
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.64
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.64
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.63
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.63
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.63
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.62
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.62
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.62
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.62
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.62
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.62
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.62
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.62
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.62
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.61
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.61
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.61
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.61
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.61
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.61
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.61
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.61
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.61
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.61
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.61
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.6
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.6
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.6
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.6
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.6
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.6
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.6
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.59
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.59
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.59
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.59
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.59
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.59
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.59
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.59
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.58
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.58
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.58
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.58
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.58
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.57
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.57
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.57
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.56
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.56
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.56
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.56
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.56
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.55
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.55
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.55
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.55
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.55
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.55
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.54
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.54
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.54
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.54
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.54
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.53
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.53
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.52
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.52
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.52
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.5
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.5
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.5
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.49
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.48
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.47
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.43
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.43
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.31
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.2
3uqc_A	286	Probable conserved transmembrane protein; structur	99.2
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.19
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	95.7
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	95.64
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	95.06
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	94.54
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	94.46
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	94.45
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	94.34
3li6_A	66	Calcium-binding protein; calcium signaling protein	94.15
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	93.63
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	93.16
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	93.03
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	92.9
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	92.76
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	92.53
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	92.52
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	92.37
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	92.17
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	91.89
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	91.85
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	91.83
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	91.76
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	91.72
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	91.7
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	91.67
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	91.32
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	91.26
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	90.8
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	90.67
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	90.36
1c07_A	95	Protein (epidermal growth factor receptor pathway	89.96
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	89.95
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	89.6
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	89.41
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	89.33
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	89.15
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	89.06
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	88.93
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	88.78
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	88.69
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	88.6
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	88.58
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	88.52
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	88.34
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	88.16
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	86.4
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	86.33
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	86.15
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	86.14
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	85.92
2jq6_A	139	EH domain-containing protein 1; metal binding prot	85.87
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	85.83
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	85.4
2jnf_A	158	Troponin C; stretch activated muscle contraction,	85.37
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	85.18
3fwb_A	161	Cell division control protein 31; gene gating, com	85.18
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	85.15
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	85.08
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	85.07
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	84.58
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	84.5
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	84.34
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	84.33
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	84.14
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	84.1
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	83.65
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	83.46
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	83.27
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	83.23
3fwb_A	161	Cell division control protein 31; gene gating, com	83.14
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	83.06
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	82.92
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	82.58
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	82.55
2jnf_A	158	Troponin C; stretch activated muscle contraction,	82.36
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	82.15
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	82.03
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	81.98
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	81.93
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	81.67
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	81.44
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	81.38
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	81.3
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	81.18
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	81.16
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	81.16
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	81.15
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	80.93
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	80.87
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	80.83
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	80.75
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	80.63
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	80.59
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	80.41
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	80.37
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	80.33

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.91  E-value=4.1e-25  Score=177.27  Aligned_cols=95  Identities=21%  Similarity=0.385  Sum_probs=76.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-CCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++. +.|+.++||||+||++|||++|++||.+.... ..+....... .+...+...++++++|+.+||..|
T Consensus       193 Tp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~d  270 (290)
T 3fpq_A          193 TPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN  270 (290)
T ss_dssp             SCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSS
T ss_pred             CccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-HHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCC
Confidence            88999999876 46999999999999999999999999754333 3333333332 233445667899999999999999


Q ss_pred             CCCCCChhhhhcCccccc
Q psy14555         80 PDKRATAGELLEDPFLAD   97 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~   97 (222)
                      |.+|||++++++||||++
T Consensus       271 P~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          271 KDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             GGGSCCHHHHHTSGGGC-
T ss_pred             hhHCcCHHHHhcCccccC
Confidence            999999999999999975

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.91  E-value=2.4e-25  Score=179.59  Aligned_cols=108  Identities=21%  Similarity=0.335  Sum_probs=86.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|.+||.+.  .......... ...+..|..+|+++++|+.+||..||
T Consensus       189 T~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~~L~~dP  265 (304)
T 3ubd_A          189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK--DRKETMTMIL-KAKLGMPQFLSPEAQSLLRMLFKRNP  265 (304)
T ss_dssp             CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc--CHHHHHHHHH-cCCCCCCCcCCHHHHHHHHHHcccCH
Confidence            78999999999999999999999999999999999999743  3333322222 23345677899999999999999999


Q ss_pred             CCCCCh-----hhhhcCccccccccccCCCCCCCCC
Q psy14555         81 DKRATA-----GELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        81 ~~R~s~-----~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      .+|||+     +++++||||++.+|.........+|
T Consensus       266 ~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP  301 (304)
T 3ubd_A          266 ANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPP  301 (304)
T ss_dssp             GGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred             HHCCCCCcCCHHHHHcCccccCCCHHHHHhCCCCcC
Confidence            999985     7999999999987765544444443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.91  E-value=6.4e-25  Score=179.80  Aligned_cols=96  Identities=32%  Similarity=0.563  Sum_probs=79.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC--CCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--HPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|.+||.+.  .............  ....+..+++++++||.+||..
T Consensus       233 Tp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~  310 (346)
T 4fih_A          233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR  310 (346)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCS
T ss_pred             CcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999999999753  3333333322222  3344567899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||.+|||++++++||||+..
T Consensus       311 dP~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          311 DPAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             STTTSCCHHHHTTCGGGGGC
T ss_pred             ChhHCcCHHHHhcCHhhcCC
Confidence            99999999999999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.90  E-value=8e-25  Score=176.79  Aligned_cols=100  Identities=23%  Similarity=0.444  Sum_probs=83.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|.+||.+  .....+..... .....+|..+++++++||.+||.+||
T Consensus       197 Tp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~-~~~~~~p~~~s~~~~dli~~lL~~dp  273 (311)
T 4aw0_A          197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKII-KLEYDFPEKFFPKARDLVEKLLVLDA  273 (311)
T ss_dssp             CGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHH-HTCCCCCTTCCHHHHHHHHHHSCSSG
T ss_pred             CcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHH-cCCCCCCcccCHHHHHHHHHHccCCH
Confidence            7899999999999999999999999999999999999974  23333333222 22345677899999999999999999


Q ss_pred             CCCCChhh------hhcCccccccccccC
Q psy14555         81 DKRATAGE------LLEDPFLADLTATRS  103 (222)
Q Consensus        81 ~~R~s~~~------~l~h~~~~~~~~~~~  103 (222)
                      .+|+|+++      +++||||++.+|...
T Consensus       274 ~~R~t~~e~~~~~~i~~Hp~F~~idw~~l  302 (311)
T 4aw0_A          274 TKRLGCEEMEGYGPLKAHPFFESVTWENL  302 (311)
T ss_dssp             GGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred             hHCcChHHHcCCHHHHCCCCcCCCCHHHh
Confidence            99999988      488999998877654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.90  E-value=1.5e-24  Score=177.93  Aligned_cols=95  Identities=23%  Similarity=0.444  Sum_probs=81.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|++||.+  .....+.........++.+..++.++++||.+||..||
T Consensus       188 T~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP  265 (350)
T 4b9d_A          188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNP  265 (350)
T ss_dssp             CCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCCh
Confidence            8899999999999999999999999999999999999974  33333333333444456677899999999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+|||++++++||||+.
T Consensus       266 ~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          266 RDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             GGSCCHHHHHTSHHHHT
T ss_pred             hHCcCHHHHhcCHHhhc
Confidence            99999999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.90  E-value=3.9e-24  Score=179.29  Aligned_cols=96  Identities=32%  Similarity=0.545  Sum_probs=79.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|.+||.+.  ............  .....+..+++++++||.+||..
T Consensus       310 Tp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~  387 (423)
T 4fie_A          310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR  387 (423)
T ss_dssp             CTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCS
T ss_pred             CcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999999999743  333332322222  23344567899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||.+|+|+.++++||||+..
T Consensus       388 dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          388 DPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             STTTSCCHHHHTTCGGGGGC
T ss_pred             ChhHCcCHHHHhcCHHhcCC
Confidence            99999999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.89  E-value=3.5e-24  Score=170.53  Aligned_cols=94  Identities=21%  Similarity=0.308  Sum_probs=77.6

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+..| +.++||||+||++|+|++|++||.+  .....+..... ......|..+|+++++|+.+||..|
T Consensus       174 T~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~--~~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~~L~~d  250 (275)
T 3hyh_A          174 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNIS-NGVYTLPKFLSPGAAGLIKRMLIVN  250 (275)
T ss_dssp             -CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHH-HTCCCCCTTSCHHHHHHHHHHSCSS
T ss_pred             CcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHccCC
Confidence            789999999998886 5799999999999999999999974  33333333222 2334567789999999999999999


Q ss_pred             CCCCCChhhhhcCccccc
Q psy14555         80 PDKRATAGELLEDPFLAD   97 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~   97 (222)
                      |.+|||++++++||||+.
T Consensus       251 P~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          251 PLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             GGGSCCHHHHHHCHHHHT
T ss_pred             hhHCcCHHHHHcCccccc
Confidence            999999999999999974

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.88  E-value=1.6e-23  Score=183.61  Aligned_cols=113  Identities=21%  Similarity=0.369  Sum_probs=90.1

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-HHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSP-QAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.. ..|+.++||||+||++|||++|.+||.+.... ...+... ........|..+|+++++||.+||..
T Consensus       353 Tp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~-i~~~~~~~p~~~S~~a~dLI~~lL~~  431 (689)
T 3v5w_A          353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTMAVELPDSFSPELRSLLEGLLQR  431 (689)
T ss_dssp             CGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH-HHHCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             CcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-hcCCCCCCCccCCHHHHHHHHHHccC
Confidence            889999999864 58999999999999999999999999642221 2222222 23344567788999999999999999


Q ss_pred             CCCCCCC-----hhhhhcCccccccccccCCCCCCCCCCCC
Q psy14555         79 DPDKRAT-----AGELLEDPFLADLTATRSSSSGLLSPEVN  114 (222)
Q Consensus        79 ~p~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~~~~  114 (222)
                      ||.+|++     ++++++||||++.+|.........+|..+
T Consensus       432 dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P  472 (689)
T 3v5w_A          432 DVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP  472 (689)
T ss_dssp             CGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred             CHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccC
Confidence            9999997     69999999999999887666555555544

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.88  E-value=1.6e-23  Score=171.03  Aligned_cols=97  Identities=23%  Similarity=0.368  Sum_probs=77.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-CCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|.+||.+.... .....+.... .....|..+++.+++||.+||.+|
T Consensus       219 T~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~d  297 (336)
T 4g3f_A          219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKE  297 (336)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSS
T ss_pred             CccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCC
Confidence            78999999999999999999999999999999999999753322 1122221111 112456788999999999999999


Q ss_pred             CCCCCChhhh-------------hcCcccccc
Q psy14555         80 PDKRATAGEL-------------LEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~-------------l~h~~~~~~   98 (222)
                      |.+|||+.++             +.|||+...
T Consensus       298 P~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          298 PVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             GGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             HhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            9999999997             578888654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.88  E-value=5.9e-23  Score=169.78  Aligned_cols=98  Identities=23%  Similarity=0.370  Sum_probs=74.1

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--------------------------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--------------------------   53 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--------------------------   53 (222)
                      |+.|||||++.+. .|+.++||||+||++|||++|++||....+....+..+..                          
T Consensus       209 T~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~  288 (361)
T 4f9c_A          209 TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPA  288 (361)
T ss_dssp             CGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCC
T ss_pred             CccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcc
Confidence            7889999988775 5999999999999999999999999643332222111100                          


Q ss_pred             --------------------------ccCCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         54 --------------------------HKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        54 --------------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                                .......+..+++++++|+.+||..||.+|+|++++++||||++.
T Consensus       289 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          289 QDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             CCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             hhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence                                      000012234678999999999999999999999999999999864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.88  E-value=2.2e-22  Score=172.58  Aligned_cols=209  Identities=19%  Similarity=0.231  Sum_probs=127.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+ .|+.++||||+||++|+|++|.+||.+. .............  ...+.+..++..+++|+.+||..
T Consensus       186 t~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  263 (486)
T 3mwu_A          186 TAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTF  263 (486)
T ss_dssp             GGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCC
Confidence            678999998765 6999999999999999999999999753 2222222222222  22334467899999999999999


Q ss_pred             CCCCCCChhhhhcCccccccccccCCCCCCCCCCCCCCCCCccccccccccccccccch----hhhhcccchhHHHHHHH
Q psy14555         79 DPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRIT----LSGVLDQDRDHICQVWL  154 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  154 (222)
                      +|.+|||+.+++.||||+.........     +..+...........+...+ ......    ...+.......-....+
T Consensus       264 dp~~R~t~~~~l~hp~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ia~~l~~~~~~~~l~~~F  337 (486)
T 3mwu_A          264 HPSLRITATQCLEHPWIQKYSSETPTI-----SDLPSLESAMTNIRQFQAEK-KLAQAALLYMASKLTTLDETKQLTEIF  337 (486)
T ss_dssp             STTTSCCHHHHHHCHHHHHTCCCCCCG-----GGHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             ChhhCcCHHHHhcCHhhccCcccCccc-----cccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence            999999999999999998643211000     00000000000000000000 011111    11222333333333344


Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcc-------hhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQ-------QKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~-------~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ..++. ++++.++.+++...+..+...+...       .....+.++..++..+|.|++|...+..++..+
T Consensus       338 ~~~D~-d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~  407 (486)
T 3mwu_A          338 RKLDT-NNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASA  407 (486)
T ss_dssp             HHHCT-TCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHH
T ss_pred             HHhCC-CCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            55554 6999999998877444433221111       112447889999999999999988877776544

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.87  E-value=5.2e-23  Score=176.81  Aligned_cols=209  Identities=18%  Similarity=0.261  Sum_probs=126.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++. +.|+.++||||+||++|+|++|.+||... .............  ...+.+..++..+++|+.+||..
T Consensus       201 t~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  278 (494)
T 3lij_A          201 TAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ-TDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQF  278 (494)
T ss_dssp             CTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCS
T ss_pred             CcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCC
Confidence            67899999875 57999999999999999999999999753 2222222222222  22233456899999999999999


Q ss_pred             CCCCCCChhhhhcCccccccccccCCCCCCCCCCCCCCCCCccccccccccccccccch----hhhhcccchhHHHHHHH
Q psy14555         79 DPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRRIT----LSGVLDQDRDHICQVWL  154 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  154 (222)
                      +|.+|||+.++++||||+..........  ..|..   .........+. .........    ...+...+...-....+
T Consensus       279 dp~~R~s~~e~l~hp~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~-~~~~l~qa~l~~ia~~~~~~~~~~~l~~~F  352 (494)
T 3lij_A          279 DSQRRISAQQALEHPWIKEMCSKKESGI--ELPSL---ANAIENMRKFQ-NSQKLAQAALLYMASKLTSQEETKELTDIF  352 (494)
T ss_dssp             STTTSCCHHHHHTCHHHHHHHHHHHC-----CCCC---SSHHHHHHTTT-TCCHHHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred             ChhhCccHHHHhcCcccccCcccccccc--ccccc---HHHHHHHHHHH-HhHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence            9999999999999999986432211100  00100   00000000000 000011111    11122333333333444


Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHh-hhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDN-IAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~-~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ..++. ++++.++.+++...+..+... ....+......+++++++.+|.|++|...+..++.++
T Consensus       353 ~~~D~-d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~  416 (494)
T 3lij_A          353 RHIDK-NGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVA  416 (494)
T ss_dssp             HHHCT-TCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHhCc-CCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            55544 699999999887744444210 1111234557788999999999999987777766554

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.87  E-value=3.9e-23  Score=177.04  Aligned_cols=209  Identities=18%  Similarity=0.210  Sum_probs=122.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC--CCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--HPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+ .|+.++||||+||++|+|++|.+||... ..............  ..+.+..++..+++|+.+||..
T Consensus       191 t~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  268 (484)
T 3nyv_A          191 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY  268 (484)
T ss_dssp             GGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCS
T ss_pred             CccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCC
Confidence            678999998765 7999999999999999999999999753 22222222222222  2233467899999999999999


Q ss_pred             CCCCCCChhhhhcCccccccccccCCCCCCCCCCCCCCCCCcccccccccccccccc--chhhhhcccchhHHHHHHHHh
Q psy14555         79 DPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDSQRR--ITLSGVLDQDRDHICQVWLKC  156 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  156 (222)
                      +|.+|||+.+++.||||+.........   ..|...  ........+....+..+..  .....+...+...-....+..
T Consensus       269 dp~~R~s~~e~l~h~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~~~F~~  343 (484)
T 3nyv_A          269 VPSMRISARDALDHEWIQTYTKEQISV---DVPSLD--NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHK  343 (484)
T ss_dssp             SGGGSCCHHHHHTSHHHHHHTC--------CCCBCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHCcCHHHHhhChhhcccccccccc---cccchH--HHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Confidence            999999999999999998653221100   000000  0000000000000000000  001111122222222333344


Q ss_pred             hhcccCCcccCHHHHHHHHHHHHHhhh----cchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        157 IQRDVDDCLLSKAHLEILMQGMRDNIA----EQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       157 ~~~~~~~~~ls~~~i~~l~~~~~~~~~----~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      ++ .++++.++.+++...+..+...+.    ..+....+.++.+++..+|.|++|......++..
T Consensus       344 ~D-~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~  407 (484)
T 3nyv_A          344 MD-KNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV  407 (484)
T ss_dssp             HC-TTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHH
T ss_pred             hC-cCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence            44 479999999988663333221111    1122455788899999999999988776666544

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.86  E-value=3.1e-22  Score=167.37  Aligned_cols=98  Identities=21%  Similarity=0.309  Sum_probs=74.4

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccC---------------------C
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKM---------------------H   57 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~---------------------~   57 (222)
                      |+.|||||++.+. .|+.++||||+||++|||++|++||.+.+ ....+..+. ..+.                     +
T Consensus       225 T~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~-~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~  303 (398)
T 4b99_A          225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN-YVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLP  303 (398)
T ss_dssp             CCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS-HHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSC
T ss_pred             ChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC-HHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCC
Confidence            7899999987765 57999999999999999999999997532 222221111 0010                     0


Q ss_pred             CCC-------CccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         58 PEI-------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        58 ~~~-------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      ...       ...++.++++||.+||..||.+|+|+.++++||||+...
T Consensus       304 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          304 PRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             CcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            111       124688999999999999999999999999999998653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.86  E-value=2e-21  Score=167.34  Aligned_cols=207  Identities=18%  Similarity=0.189  Sum_probs=127.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC--CCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++. +.|+.++||||+||++|+|++|.+||... ................  ..+..++..+++|+.+||..
T Consensus       211 t~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  288 (504)
T 3q5i_A          211 TAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ-NDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTY  288 (504)
T ss_dssp             CTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCS
T ss_pred             CcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCC
Confidence            67899999876 57999999999999999999999999753 2222222222222211  22356799999999999999


Q ss_pred             CCCCCCChhhhhcCccccccccccCCCCCCCCCCCCCCCCCccccccccc-ccccccc----chhhhhcccchhHHHHHH
Q psy14555         79 DPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLC-KKDSQRR----ITLSGVLDQDRDHICQVW  153 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~  153 (222)
                      +|.+|||+.+++.||||+........      ....  ............ .......    .....++..+...-....
T Consensus       289 dp~~R~t~~e~l~h~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~kl~~a~l~~i~~~~~~~~~~~~l~~~  360 (504)
T 3q5i_A          289 DYNKRCTAEEALNSRWIKKYANNINK------SDQK--TLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDI  360 (504)
T ss_dssp             STTTSCCHHHHHTSHHHHHTCCCCCG------GGHH--HHHHHHHHHHHCCCCSHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             ChhHCCCHHHHhcCHhhhhchhcccc------cchh--hHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHH
Confidence            99999999999999999864211000      0000  000000000000 0000000    111222233443434444


Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhc-chhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAE-QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~-~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +..++. ++++.++.+++...+..+...... ........++.+++..+|.|++|...+..++..+
T Consensus       361 F~~~D~-d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~  425 (504)
T 3q5i_A          361 FKKLDK-NGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVC  425 (504)
T ss_dssp             HHHHCT-TCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred             HHeeCC-CCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            455554 699999999988866666543211 0113456788999999999999987777666544

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.85  E-value=4.4e-22  Score=173.68  Aligned_cols=99  Identities=23%  Similarity=0.324  Sum_probs=80.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc--cCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH--KMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|.+||.+. .....+..+...  ......+..++.++++||.+||..
T Consensus       319 T~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~  397 (573)
T 3uto_A          319 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA  397 (573)
T ss_dssp             SGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCS
T ss_pred             CccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccC
Confidence            78999999999999999999999999999999999999753 222333222222  222334467899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccccc
Q psy14555         79 DPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                      ||.+||++.++++||||+...+
T Consensus       398 dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          398 DPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             SGGGSCCHHHHHHSTTTSCCCC
T ss_pred             ChhHCcCHHHHhcCcCcCCCCC
Confidence            9999999999999999986543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.84  E-value=4e-22  Score=160.79  Aligned_cols=96  Identities=19%  Similarity=0.238  Sum_probs=72.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|||++   ||... ...............++.+...++.+.+|+.+||..||
T Consensus       193 T~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP  268 (299)
T 4g31_A          193 TKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-MERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSP  268 (299)
T ss_dssp             CCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-HHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSG
T ss_pred             CccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-cHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCCh
Confidence            789999999999999999999999999999996   77421 11111111112222222334557788999999999999


Q ss_pred             CCCCChhhhhcCcccccccc
Q psy14555         81 DKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~~~  100 (222)
                      .+|||+.++++||||++.++
T Consensus       269 ~~Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          269 MERPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             GGSCCHHHHHTSGGGCCC--
T ss_pred             hHCcCHHHHhcCHhhCCCCC
Confidence            99999999999999987644

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.83  E-value=9.7e-21  Score=155.24  Aligned_cols=109  Identities=25%  Similarity=0.427  Sum_probs=87.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||...  .......... ......|..++.++.+|+.+||..+|
T Consensus       168 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~lL~~dP  244 (337)
T 1o6l_A          168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELIL-MEEIRFPRTLSPEAKSLLAGLLKKDP  244 (337)
T ss_dssp             CGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSST
T ss_pred             ChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC--CHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            67899999999999999999999999999999999999742  2333322222 22344567889999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCCCCCCCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSSSGLLSPE  112 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~~  112 (222)
                      .+||     ++.++++||||....|.........+|.
T Consensus       245 ~~R~g~~~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~  281 (337)
T 1o6l_A          245 KQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF  281 (337)
T ss_dssp             TTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSC
T ss_pred             HHhcCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCC
Confidence            9999     8999999999998877665444444443

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.83  E-value=4.7e-21  Score=156.41  Aligned_cols=90  Identities=17%  Similarity=0.358  Sum_probs=76.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+..|+.++|||||||++|||++ |+.||.+.  ...........+..++.|..+++++.+|+.+||..|
T Consensus       223 t~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~d  300 (329)
T 4aoj_A          223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAIDCITQGRELERPRACPPEVYAIMRGCWQRE  300 (329)
T ss_dssp             CGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--CHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSS
T ss_pred             cccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcC
Confidence            678999999999999999999999999999999 99999754  233333333445566778889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+|||+.+++.+
T Consensus       301 P~~RPs~~ei~~~  313 (329)
T 4aoj_A          301 PQQRHSIKDVHAR  313 (329)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.83  E-value=3.1e-21  Score=156.14  Aligned_cols=90  Identities=14%  Similarity=0.296  Sum_probs=77.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++|||||||++|||++ |.+||.+.  ....+......+..++.|..++..+.+|+.+||..+
T Consensus       210 t~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~d  287 (308)
T 4gt4_A          210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEF  287 (308)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999998 89999754  334444444455566678889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       288 P~~RPs~~ei~~~  300 (308)
T 4gt4_A          288 PSRRPRFKDIHSR  300 (308)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999765

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.83  E-value=1.7e-21  Score=160.31  Aligned_cols=91  Identities=22%  Similarity=0.368  Sum_probs=78.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++|||||||++|||++ |.+||.+.... ..+......+..+..|..+++++.+++.+||..|
T Consensus       250 t~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~d  328 (353)
T 4ase_A          250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE  328 (353)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcC
Confidence            678999999999999999999999999999998 99999864433 3344444455667778889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+|||+.+++.|
T Consensus       329 P~~RPt~~eil~~  341 (353)
T 4ase_A          329 PSQRPTFSELVEH  341 (353)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999987

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.82  E-value=4.2e-21  Score=154.76  Aligned_cols=94  Identities=19%  Similarity=0.410  Sum_probs=78.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++|||||||++|||++ |++||.+.  ....+......+..++.|..+++++.+|+.+||..+
T Consensus       193 t~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~d  270 (299)
T 4asz_A          193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--SNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQRE  270 (299)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999998 99999754  334444444445556678889999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||+++++  ++|++..
T Consensus       271 P~~RPs~~~i--~~~L~~~  287 (299)
T 4asz_A          271 PHMRKNIKGI--HTLLQNL  287 (299)
T ss_dssp             GGGSCCHHHH--HHHHHHH
T ss_pred             hhHCcCHHHH--HHHHHHH
Confidence            9999999998  4566543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.82  E-value=8.8e-21  Score=158.61  Aligned_cols=113  Identities=24%  Similarity=0.416  Sum_probs=88.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-------HHHHHHhhhccCCCCCCccccHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-------QAALYRVGFHKMHPEIPAELSDKAKQFIL   73 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~   73 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||...+..       ...+... ........|..++.++++||.
T Consensus       216 t~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~-i~~~~~~~p~~~s~~~~~li~  294 (396)
T 4dc2_A          216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-ILEKQIRIPRSLSVKAASVLK  294 (396)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHH-HHHCCCCCCTTSCHHHHHHHH
T ss_pred             CcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHH-HhccccCCCCcCCHHHHHHHH
Confidence            67899999999999999999999999999999999999632211       1112222 223445567789999999999


Q ss_pred             HhcccCCCCCCCh------hhhhcCccccccccccCCCCCCCCCCCC
Q psy14555         74 RCFEKDPDKRATA------GELLEDPFLADLTATRSSSSGLLSPEVN  114 (222)
Q Consensus        74 ~~l~~~p~~R~s~------~~~l~h~~~~~~~~~~~~~~~~~~~~~~  114 (222)
                      +||..+|.+|+++      +++++||||++.+|.........+|..+
T Consensus       295 ~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p  341 (396)
T 4dc2_A          295 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP  341 (396)
T ss_dssp             HHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCCC
T ss_pred             HHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCcC
Confidence            9999999999985      7999999999988776555545444443

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.82  E-value=2.6e-20  Score=155.17  Aligned_cols=114  Identities=19%  Similarity=0.314  Sum_probs=87.5

Q ss_pred             CcceecCcccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVN---SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~---~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||++..   ..|+.++||||+||++|+|++|.+||......................|..++..+.+|+.+||.
T Consensus       177 t~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~  256 (384)
T 4fr4_A          177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLE  256 (384)
T ss_dssp             CGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSC
T ss_pred             CccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhc
Confidence            678999998864   45999999999999999999999999743322222111222234455677889999999999999


Q ss_pred             cCCCCCCC-hhhhhcCccccccccccCCCCCCCCCCCC
Q psy14555         78 KDPDKRAT-AGELLEDPFLADLTATRSSSSGLLSPEVN  114 (222)
Q Consensus        78 ~~p~~R~s-~~~~l~h~~~~~~~~~~~~~~~~~~~~~~  114 (222)
                      .+|.+||+ +.+++.||||.+..|.........+|..+
T Consensus       257 ~dP~~R~s~~~~l~~hp~f~~~~w~~~~~~~~~p~~~p  294 (384)
T 4fr4_A          257 PNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIP  294 (384)
T ss_dssp             SSGGGSCCSHHHHHTSGGGTTCCHHHHHTTCSCCCCCC
T ss_pred             CCHhHhcccHHHHHcChhhhcCCHHHHHhCCCCCCCCC
Confidence            99999998 89999999999988776555555554443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.82  E-value=1.1e-20  Score=152.58  Aligned_cols=92  Identities=17%  Similarity=0.328  Sum_probs=71.7

Q ss_pred             CcceecCcccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC---CCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVN---SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM---HPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~---~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~   74 (222)
                      |+.|||||++.+   +.|+.++|||||||++|||++|+.||.+................   .+..+..++..+.+|+.+
T Consensus       197 T~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~  276 (307)
T 3omv_A          197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVAD  276 (307)
T ss_dssp             CTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHH
T ss_pred             CCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHH
Confidence            789999998854   46999999999999999999999999765443333222222111   224456789999999999


Q ss_pred             hcccCCCCCCChhhhhcC
Q psy14555         75 CFEKDPDKRATAGELLED   92 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h   92 (222)
                      ||..+|.+|||+.+++.+
T Consensus       277 cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          277 CVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HTCSSSTTSCCHHHHHHH
T ss_pred             HcCCCHhHCcCHHHHHHH
Confidence            999999999999988654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.82  E-value=1.4e-20  Score=153.17  Aligned_cols=110  Identities=17%  Similarity=0.318  Sum_probs=87.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|.+||... ...........  .....|..++.++.+|+.+||..+|
T Consensus       166 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~~i~~--~~~~~p~~~~~~~~~li~~lL~~dp  242 (318)
T 1fot_A          166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILN--AELRFPPFFNEDVKDLLSRLITRDL  242 (318)
T ss_dssp             CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSCT
T ss_pred             CccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHh--CCCCCCCCCCHHHHHHHHHHhccCH
Confidence            67899999999999999999999999999999999999742 22222222222  2344567789999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCCCCCCCCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSSSGLLSPEV  113 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~~~  113 (222)
                      .+|+     +++++++||||++..|.........+|..
T Consensus       243 ~~R~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~  280 (318)
T 1fot_A          243 SQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYE  280 (318)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCC
T ss_pred             HHcCCCcCCCHHHHhcCccccCCCHHHHHhCCCCCCCC
Confidence            9999     89999999999988776655544444433

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.81  E-value=7.1e-21  Score=156.98  Aligned_cols=109  Identities=19%  Similarity=0.352  Sum_probs=86.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||...  .......... ......|..++..+.+|+.+||..+|
T Consensus       187 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~~~~~~~li~~lL~~dP  263 (353)
T 3txo_A          187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--NEDDLFEAIL-NDEVVYPTWLHEDATGILKSFMTKNP  263 (353)
T ss_dssp             CGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC--CHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhhhCH
Confidence            67899999999999999999999999999999999999743  3333322222 22344566789999999999999999


Q ss_pred             CCCCCh------hhhhcCccccccccccCCCCCCCCCC
Q psy14555         81 DKRATA------GELLEDPFLADLTATRSSSSGLLSPE  112 (222)
Q Consensus        81 ~~R~s~------~~~l~h~~~~~~~~~~~~~~~~~~~~  112 (222)
                      .+|+++      .++++||||++..|.........+|.
T Consensus       264 ~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~  301 (353)
T 3txo_A          264 TMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPF  301 (353)
T ss_dssp             GGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSC
T ss_pred             HHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCc
Confidence            999998      88999999999877665444444443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.81  E-value=2.9e-20  Score=152.90  Aligned_cols=110  Identities=25%  Similarity=0.447  Sum_probs=85.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-------HHHHHHhhhccCCCCCCccccHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-------QAALYRVGFHKMHPEIPAELSDKAKQFIL   73 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~   73 (222)
                      |+.|+|||.+.+..|+.++||||+||++|||++|.+||...+..       ....... ........|..++..+.+|+.
T Consensus       173 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-i~~~~~~~p~~~s~~~~~li~  251 (345)
T 3a8x_A          173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-ILEKQIRIPRSLSVKAASVLK  251 (345)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH-HHHCCCCCCTTSCHHHHHHHH
T ss_pred             CccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH-HHcCCCCCCCCCCHHHHHHHH
Confidence            67899999999999999999999999999999999999642211       1122222 222334567788999999999


Q ss_pred             HhcccCCCCCCCh------hhhhcCccccccccccCCCCCCCCC
Q psy14555         74 RCFEKDPDKRATA------GELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        74 ~~l~~~p~~R~s~------~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      +||..+|.+||++      .+++.||||++..|.........+|
T Consensus       252 ~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~~p  295 (345)
T 3a8x_A          252 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPP  295 (345)
T ss_dssp             HHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred             HHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCCCC
Confidence            9999999999996      7999999999887765444444444

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.81  E-value=9.7e-21  Score=155.71  Aligned_cols=108  Identities=20%  Similarity=0.403  Sum_probs=86.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||...  .......... ...+..|..++..+.+|+.+||..+|
T Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~lL~~dp  257 (345)
T 1xjd_A          181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIR-MDNPFYPRWLEKEAKDLLVKLFVREP  257 (345)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred             CcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHH-hCCCCCCcccCHHHHHHHHHHhcCCH
Confidence            67899999999999999999999999999999999999743  3333332222 22344567789999999999999999


Q ss_pred             CCCCChh-hhhcCccccccccccCCCCCCCCC
Q psy14555         81 DKRATAG-ELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        81 ~~R~s~~-~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      .+||++. ++++||||++..|.........+|
T Consensus       258 ~~R~~~~~~i~~hp~f~~~~w~~l~~~~~~~p  289 (345)
T 1xjd_A          258 EKRLGVRGDIRQHPLFREINWEELERKEIDPP  289 (345)
T ss_dssp             GGSBTTBSCGGGSGGGTTCCHHHHHTTCSCC-
T ss_pred             hHcCCChHHHHcCccccCCCHHHHhhCCCCCC
Confidence            9999998 999999999987765544444443

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.81  E-value=3e-20  Score=149.57  Aligned_cols=97  Identities=34%  Similarity=0.598  Sum_probs=79.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.... ........ .........+..++..+.+|+.+||..+
T Consensus       179 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  257 (297)
T 3fxz_A          179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN-PLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMD  257 (297)
T ss_dssp             CGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSS
T ss_pred             CcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCC
Confidence            678999999999999999999999999999999999997532 22222222 2223334456778999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.++++||||+..
T Consensus       258 p~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          258 VEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             TTTSCCHHHHTTCGGGGGC
T ss_pred             hhHCcCHHHHhhChhhccc
Confidence            9999999999999999853

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.81  E-value=5.1e-20  Score=151.71  Aligned_cols=109  Identities=20%  Similarity=0.323  Sum_probs=86.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|.+||...  ........... .....|..++..+.+|+.+||..+|
T Consensus       201 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~-~~~~~p~~~~~~~~~li~~lL~~dp  277 (350)
T 1rdq_E          201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVS-GKVRFPSHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHH-CCCCCCTTCCHHHHHHHHHHSCSCT
T ss_pred             CccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC--CHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            67899999999999999999999999999999999999742  23333222222 2345567789999999999999999


Q ss_pred             CCCCC-----hhhhhcCccccccccccCCCCCCCCCC
Q psy14555         81 DKRAT-----AGELLEDPFLADLTATRSSSSGLLSPE  112 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~~  112 (222)
                      .+||+     ++++++||||....|.........+|.
T Consensus       278 ~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~  314 (350)
T 1rdq_E          278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF  314 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSC
T ss_pred             HhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCC
Confidence            99998     999999999998877654444444443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.80  E-value=3.2e-20  Score=153.06  Aligned_cols=110  Identities=18%  Similarity=0.313  Sum_probs=87.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||...  ....+..... ......|..++.++.+|+.+||..+|
T Consensus       184 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~lL~~dP  260 (353)
T 2i0e_A          184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIM-EHNVAYPKSMSKEAVAICKGLMTKHP  260 (353)
T ss_dssp             CGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSCT
T ss_pred             CccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC--CHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            67899999999999999999999999999999999999742  3333332222 22345567889999999999999999


Q ss_pred             CCCCC-----hhhhhcCccccccccccCCCCCCCCCCC
Q psy14555         81 DKRAT-----AGELLEDPFLADLTATRSSSSGLLSPEV  113 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~~~  113 (222)
                      .+||+     +.+++.||||+...|.........+|..
T Consensus       261 ~~R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~  298 (353)
T 2i0e_A          261 GKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK  298 (353)
T ss_dssp             TSCTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred             HHcCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCcC
Confidence            99995     5899999999998877655544444443

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.80  E-value=5e-20  Score=156.31  Aligned_cols=108  Identities=23%  Similarity=0.422  Sum_probs=86.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|..||...  .......... ......|..+++.+.+|+.+||..||
T Consensus       312 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~~~~~~~li~~~L~~dP  388 (446)
T 4ejn_A          312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELIL-MEEIRFPRTLGPEAKSLLSGLLKKDP  388 (446)
T ss_dssp             CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSST
T ss_pred             CccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHH-hCCCCCCccCCHHHHHHHHHHcccCH
Confidence            67899999999999999999999999999999999999743  2233222211 22344567789999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCCCCCCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      .+||     ++.++++||||.+..|.........+|
T Consensus       389 ~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp  424 (446)
T 4ejn_A          389 KQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP  424 (446)
T ss_dssp             TTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred             HHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCC
Confidence            9999     999999999999987765544444444

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.80  E-value=4.2e-20  Score=160.02  Aligned_cols=112  Identities=23%  Similarity=0.350  Sum_probs=87.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS--PQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||.....  ....+.... .......|..++..+.+|+.+||..
T Consensus       352 T~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i-~~~~~~~p~~~s~~~~~li~~lL~~  430 (543)
T 3c4z_A          352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFCEALLQK  430 (543)
T ss_dssp             CTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH-HHCCCCCCTTSCHHHHHHHHHHSCS
T ss_pred             CccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH-hhcccCCCcccCHHHHHHHHHhccC
Confidence            6789999999999999999999999999999999999975322  122222222 2233455678899999999999999


Q ss_pred             CCCCCCC-----hhhhhcCccccccccccCCCCCCCCCCC
Q psy14555         79 DPDKRAT-----AGELLEDPFLADLTATRSSSSGLLSPEV  113 (222)
Q Consensus        79 ~p~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~~~  113 (222)
                      +|.+||+     +.+++.||||+...|.........+|..
T Consensus       431 dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~  470 (543)
T 3c4z_A          431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFV  470 (543)
T ss_dssp             SGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred             CHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCC
Confidence            9999996     4789999999998876554444444443

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.80  E-value=9e-20  Score=153.19  Aligned_cols=112  Identities=18%  Similarity=0.246  Sum_probs=84.5

Q ss_pred             CcceecCcccCCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSS----YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~~~----y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~   74 (222)
                      |+.|+|||++.+..    |+.++||||+||++|||++|.+||... ........+..  .....+.+..++..+++||.+
T Consensus       232 t~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~  310 (410)
T 3v8s_A          232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA  310 (410)
T ss_dssp             CGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred             CccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-ChhhHHHHHHhccccccCCCcccccHHHHHHHHH
Confidence            78899999887766    889999999999999999999999742 22222222211  122333345789999999999


Q ss_pred             hcccCCCC--CCChhhhhcCccccccccccCCCCCCCCCCC
Q psy14555         75 CFEKDPDK--RATAGELLEDPFLADLTATRSSSSGLLSPEV  113 (222)
Q Consensus        75 ~l~~~p~~--R~s~~~~l~h~~~~~~~~~~~~~~~~~~~~~  113 (222)
                      ||..+|.+  |++++++++||||++..|.........+|..
T Consensus       311 lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~  351 (410)
T 3v8s_A          311 FLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVV  351 (410)
T ss_dssp             HSSCGGGCTTSSCHHHHHTSGGGCCSSCCSTTGGGSCCSCC
T ss_pred             HccChhhhCCCCCHHHHhcCccccCCCHHHHhhcccCCCCC
Confidence            99998888  9999999999999988776544444444433

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.80  E-value=3e-20  Score=153.72  Aligned_cols=97  Identities=22%  Similarity=0.324  Sum_probs=77.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-cc--CCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HK--MHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|.+||.+.  .......... ..  .....+..++..+++||.+||.
T Consensus       181 t~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  258 (361)
T 2yab_A          181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV  258 (361)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSC
T ss_pred             CccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCC
Confidence            67899999999999999999999999999999999999753  3333322221 11  1222235679999999999999


Q ss_pred             cCCCCCCChhhhhcCccccccc
Q psy14555         78 KDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      .+|.+||++.++++||||....
T Consensus       259 ~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          259 KETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             SSTTTSCCHHHHHTSTTTSCSS
T ss_pred             CChhHCcCHHHHhcCcCcCCCc
Confidence            9999999999999999998643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.79  E-value=1.3e-19  Score=148.00  Aligned_cols=95  Identities=21%  Similarity=0.361  Sum_probs=77.4

Q ss_pred             CcceecCcccCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYS-PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~-~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|. .++||||+||++|+|++|..||.+.  .......... ......|..++.++.+|+.+||..|
T Consensus       176 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~~L~~d  252 (328)
T 3fe3_A          176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ--NLKELRERVL-RGKYRIPFYMSTDCENLLKRFLVLN  252 (328)
T ss_dssp             SGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHCCSS
T ss_pred             CcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHCCCC
Confidence            6789999999888875 7999999999999999999999743  2233222221 2234456678999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+|||++++++||||...
T Consensus       253 P~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          253 PIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             TTTSCCHHHHTTCTTTTTT
T ss_pred             hhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.79  E-value=1.1e-19  Score=150.81  Aligned_cols=109  Identities=20%  Similarity=0.336  Sum_probs=86.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||..  ............ .....+..++..+.+|+.+||..+|
T Consensus       202 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--~~~~~~~~~i~~-~~~~~~~~~~~~~~~li~~lL~~dp  278 (373)
T 2r5t_A          202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS--RNTAEMYDNILN-KPLQLKPNITNSARHLLEGLLQKDR  278 (373)
T ss_dssp             CCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC--SBHHHHHHHHHH-SCCCCCSSSCHHHHHHHHHHTCSSG
T ss_pred             CccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC--CCHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHcccCH
Confidence            6789999999999999999999999999999999999974  233333332222 2344566789999999999999999


Q ss_pred             CCCCCh----hhhhcCccccccccccCCCCCCCCCC
Q psy14555         81 DKRATA----GELLEDPFLADLTATRSSSSGLLSPE  112 (222)
Q Consensus        81 ~~R~s~----~~~l~h~~~~~~~~~~~~~~~~~~~~  112 (222)
                      .+|+++    .+++.||||+..+|.........+|.
T Consensus       279 ~~R~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~pp~  314 (373)
T 2r5t_A          279 TKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPF  314 (373)
T ss_dssp             GGSTTTTTTHHHHHTSGGGTTCCHHHHHTTCSCCSC
T ss_pred             HhCCCCCCCHHHHhCCccccCCCHHHHHhCCCCCCC
Confidence            999987    58999999999887765554444443

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.79  E-value=8.6e-20  Score=162.13  Aligned_cols=111  Identities=18%  Similarity=0.318  Sum_probs=90.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++|.+||..  .....+..... .....+|..++.++.+||.+||..+|
T Consensus       505 T~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~--~~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~lL~~dP  581 (674)
T 3pfq_A          505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIM-EHNVAYPKSMSKEAVAICKGLMTKHP  581 (674)
T ss_dssp             CSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHH-SSCCCCCTTSCHHHHHHHHHHSCSSS
T ss_pred             CCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC--CCHHHHHHHHH-hCCCCCCccCCHHHHHHHHHHccCCH
Confidence            7889999999999999999999999999999999999974  23333333322 23445677899999999999999999


Q ss_pred             CCCCCh-----hhhhcCccccccccccCCCCCCCCCCCC
Q psy14555         81 DKRATA-----GELLEDPFLADLTATRSSSSGLLSPEVN  114 (222)
Q Consensus        81 ~~R~s~-----~~~l~h~~~~~~~~~~~~~~~~~~~~~~  114 (222)
                      .+|+++     ++++.||||+..+|.........+|..+
T Consensus       582 ~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p  620 (674)
T 3pfq_A          582 GKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP  620 (674)
T ss_dssp             TTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCC
T ss_pred             HHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCC
Confidence            999998     8999999999988877666555555443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.79  E-value=6.7e-20  Score=152.72  Aligned_cols=98  Identities=24%  Similarity=0.466  Sum_probs=74.3

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccCCC--------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKMHP--------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~~--------------------   58 (222)
                      |+.|+|||++.+ ..|+.++||||+||++|||++|++||.+.. ....+... ...+.+.                    
T Consensus       193 t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~  271 (388)
T 3oz6_A          193 TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS-TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLK  271 (388)
T ss_dssp             GGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHH
T ss_pred             cCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCc
Confidence            567999998876 679999999999999999999999997532 22222111 1111100                    


Q ss_pred             ------------------------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         59 ------------------------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        59 ------------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                                              ..+...++.+.+|+.+||..||.+|||++++++||||+...
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          272 EKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             HHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             ccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence                                    01125688999999999999999999999999999998654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.79  E-value=7.5e-20  Score=159.10  Aligned_cols=111  Identities=25%  Similarity=0.422  Sum_probs=87.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS--PQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||.....  ....+... ........+..++.++++|+.+||..
T Consensus       348 T~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~-i~~~~~~~p~~~s~~~~dLI~~lL~~  426 (576)
T 2acx_A          348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL-VKEVPEEYSERFSPQARSLCSQLLCK  426 (576)
T ss_dssp             CGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH-HHHCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             CccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH-hhcccccCCccCCHHHHHHHHHhccC
Confidence            6789999999999999999999999999999999999975322  12222222 22334456678899999999999999


Q ss_pred             CCCCCC-----ChhhhhcCccccccccccCCCCCCCCCC
Q psy14555         79 DPDKRA-----TAGELLEDPFLADLTATRSSSSGLLSPE  112 (222)
Q Consensus        79 ~p~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~~  112 (222)
                      +|.+|+     ++++++.||||++..|.........+|.
T Consensus       427 dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~  465 (576)
T 2acx_A          427 DPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF  465 (576)
T ss_dssp             SGGGSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSC
T ss_pred             CHHHcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCC
Confidence            999999     7899999999999877655444444443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.79  E-value=7.8e-20  Score=149.08  Aligned_cols=108  Identities=21%  Similarity=0.410  Sum_probs=84.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||... ..........  ......|..++..+.+|+.+||..+|
T Consensus       184 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~--~~~~~~p~~~~~~~~~li~~~L~~dp  260 (327)
T 3a62_A          184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE-NRKKTIDKIL--KCKLNLPPYLTQEARDLLKKLLKRNA  260 (327)
T ss_dssp             CCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHH--HTCCCCCTTSCHHHHHHHHHHSCSCG
T ss_pred             CcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC-CHHHHHHHHH--hCCCCCCCCCCHHHHHHHHHHHhcCH
Confidence            67899999999999999999999999999999999999743 2222222221  22344566789999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCCCCCCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      .+||     ++.+++.||||+...|.........+|
T Consensus       261 ~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~~p  296 (327)
T 3a62_A          261 ASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPP  296 (327)
T ss_dssp             GGSTTSSTTTHHHHHHSGGGSSCCHHHHHTTCSCCS
T ss_pred             hhccCCCCCCHHHHHcCCcccCCCHHHHhhccCCCC
Confidence            9999     788999999999877665444433333

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.79  E-value=9.5e-20  Score=152.13  Aligned_cols=98  Identities=26%  Similarity=0.445  Sum_probs=78.0

Q ss_pred             CcceecCcccCC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHH
Q psy14555          1 MNVIFLTQYSVN-----------SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK   69 (222)
Q Consensus         1 t~~y~aPe~~~~-----------~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (222)
                      |+.|+|||++.+           ..|+.++||||+||++|+|++|.+||.........+............+...+..+.
T Consensus       219 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (390)
T 2zmd_A          219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ  298 (390)
T ss_dssp             CGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred             CCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHH
Confidence            678999998765           479999999999999999999999997543333333333333444455666789999


Q ss_pred             HHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         70 QFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        70 ~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|+.+||..+|.+||++.+++.||||+..
T Consensus       299 ~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          299 DVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            99999999999999999999999999753

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.79  E-value=2.1e-19  Score=145.57  Aligned_cols=99  Identities=25%  Similarity=0.435  Sum_probs=74.2

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH--HHHhhhccCCCC------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA--LYRVGFHKMHPE------------------   59 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~~------------------   59 (222)
                      |+.|+|||.+.+ ..|+.++||||+||++|+|++|.+||.........  +........+..                  
T Consensus       182 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (311)
T 3niz_A          182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVF  261 (311)
T ss_dssp             CCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCC
T ss_pred             cCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccc
Confidence            678999998876 56899999999999999999999999754332222  111111111000                  


Q ss_pred             -------CCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         60 -------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        60 -------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                             ....++.++.+|+.+||..||.+|||+.++++||||++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             cCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence                   0123578899999999999999999999999999998753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.79  E-value=1.5e-19  Score=153.38  Aligned_cols=96  Identities=23%  Similarity=0.388  Sum_probs=78.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-h--hccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-G--FHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||...  ........ .  ....+.+.+..+++.+++|+.+||.
T Consensus       176 t~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  253 (444)
T 3soa_A          176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT  253 (444)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSC
T ss_pred             CcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999999743  23332222 2  2223334446789999999999999


Q ss_pred             cCCCCCCChhhhhcCcccccc
Q psy14555         78 KDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .||.+||++.++++||||...
T Consensus       254 ~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          254 INPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             SSTTTSCCHHHHHHSCTTHHH
T ss_pred             CChhHCCCHHHHhcCccccCC
Confidence            999999999999999999753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.78  E-value=2.2e-19  Score=146.35  Aligned_cols=101  Identities=20%  Similarity=0.291  Sum_probs=81.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh--hccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG--FHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++|..||... ..........  ........+..++..+.+|+.+||..
T Consensus       196 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  274 (327)
T 3lm5_A          196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE-DNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVK  274 (327)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCS
T ss_pred             CcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999999753 2222222221  22333444567899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccccccc
Q psy14555         79 DPDKRATAGELLEDPFLADLTATR  102 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~~~  102 (222)
                      +|.+||+++++++||||+...+..
T Consensus       275 dP~~Rpt~~~ll~h~~~~~~~~~~  298 (327)
T 3lm5_A          275 NPEKRPTAEICLSHSWLQQWDFEN  298 (327)
T ss_dssp             SGGGSCCHHHHTTCGGGCCCCTTC
T ss_pred             ChhhCcCHHHHhCCHhhccccccc
Confidence            999999999999999999876554

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.78  E-value=1.1e-19  Score=149.06  Aligned_cols=98  Identities=26%  Similarity=0.446  Sum_probs=79.0

Q ss_pred             CcceecCcccCC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHH
Q psy14555          1 MNVIFLTQYSVN-----------SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK   69 (222)
Q Consensus         1 t~~y~aPe~~~~-----------~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (222)
                      |+.|+|||++.+           ..|+.++||||+||++|+|++|..||......................+...+..+.
T Consensus       172 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  251 (343)
T 3dbq_A          172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ  251 (343)
T ss_dssp             CCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred             CcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHH
Confidence            678999998754           789999999999999999999999997544433334333334445566677789999


Q ss_pred             HHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         70 QFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        70 ~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|+.+||..+|.+||++.+++.||||+..
T Consensus       252 ~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          252 DVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            99999999999999999999999999753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.78  E-value=2.2e-19  Score=146.18  Aligned_cols=98  Identities=12%  Similarity=0.194  Sum_probs=78.7

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..+ +.++||||+||++|+|++|..||......................+..++..+.+|+.+||..+
T Consensus       170 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  249 (323)
T 3tki_A          170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVEN  249 (323)
T ss_dssp             CGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSS
T ss_pred             CcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCC
Confidence            678999999887776 7799999999999999999999975443323333333333333445678999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.++++||||...
T Consensus       250 P~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          250 PSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             TTTSCCHHHHTTCTTTTCC
T ss_pred             hhhCcCHHHHhhChhhccc
Confidence            9999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.78  E-value=3.2e-19  Score=145.09  Aligned_cols=96  Identities=33%  Similarity=0.562  Sum_probs=77.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC--CCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH--PEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|..||... ......... .....  ...+..++..+.+|+.+||..
T Consensus       204 t~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~  281 (321)
T 2c30_A          204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-SPVQAMKRL-RDSPPPKLKNSHKVSPVLRDFLERMLVR  281 (321)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHH-HHSSCCCCTTGGGSCHHHHHHHHHHSCS
T ss_pred             CccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHH-hcCCCCCcCccccCCHHHHHHHHHHccC
Confidence            67899999999999999999999999999999999999743 222222222 22222  223456789999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.||||...
T Consensus       282 dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          282 DPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             STTTSCCHHHHHTSGGGGGC
T ss_pred             ChhhCcCHHHHhcChhhccC
Confidence            99999999999999999753

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.78  E-value=4.8e-20  Score=151.77  Aligned_cols=96  Identities=23%  Similarity=0.387  Sum_probs=76.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|.+||..  .............  ..+..+..++..+++|+.+||..
T Consensus       196 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  273 (351)
T 3c0i_A          196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG--TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLML  273 (351)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS--SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCS
T ss_pred             CcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC--cHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCC
Confidence            6789999999999999999999999999999999999964  2222222221111  11122246789999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||.+||++.++++||||+..
T Consensus       274 dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          274 DPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             STTTSCCHHHHHTSHHHHTH
T ss_pred             ChhHCcCHHHHhcChhhcCC
Confidence            99999999999999999754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.78  E-value=2.3e-19  Score=150.27  Aligned_cols=97  Identities=22%  Similarity=0.380  Sum_probs=77.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-----QAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||......     ............+...+..++.++.+||.+|
T Consensus       226 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  305 (400)
T 1nxk_A          226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL  305 (400)
T ss_dssp             -CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTT
T ss_pred             CCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHH
Confidence            67899999999999999999999999999999999999643211     1122222222233334467899999999999


Q ss_pred             cccCCCCCCChhhhhcCccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      |..+|.+||++.+++.||||..
T Consensus       306 L~~dP~~Rpt~~eil~hp~~~~  327 (400)
T 1nxk_A          306 LKTEPTQRMTITEFMNHPWIMQ  327 (400)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHT
T ss_pred             CCCChhHCcCHHHHhcCccccC
Confidence            9999999999999999999975

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.78  E-value=3.6e-19  Score=142.40  Aligned_cols=96  Identities=20%  Similarity=0.344  Sum_probs=75.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+. +.|+.++|+||+||++|+|++|..||......................+...++.+.+|+.+||..+|
T Consensus       193 t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  271 (290)
T 1t4h_A          193 TPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNK  271 (290)
T ss_dssp             SCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSG
T ss_pred             CcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCCh
Confidence            67899999776 56999999999999999999999999764433333322222222333455677899999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+||++.++++||||++
T Consensus       272 ~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          272 DERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             GGSCCHHHHHTSGGGC-
T ss_pred             hhCCCHHHHhhCccccc
Confidence            99999999999999975

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.78  E-value=1.5e-19  Score=149.58  Aligned_cols=95  Identities=24%  Similarity=0.368  Sum_probs=77.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hh--ccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GF--HKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||...  ........ ..  ...+...+..++..+.+|+.+||.
T Consensus       193 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  270 (362)
T 2bdw_A          193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT  270 (362)
T ss_dssp             CTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSC
T ss_pred             CccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999999743  22332222 12  222233345789999999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+|.+||++.+++.||||..
T Consensus       271 ~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          271 VNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             SSGGGSCCHHHHTTSHHHHT
T ss_pred             CChhhCcCHHHHhcCcccCC
Confidence            99999999999999999975

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.78  E-value=3.1e-19  Score=145.55  Aligned_cols=99  Identities=25%  Similarity=0.351  Sum_probs=74.4

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCC--CC----------------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHP--EI----------------   60 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~--~~----------------   60 (222)
                      |..|+|||.+.+. .|+.++||||+||++|+|++|.+||.... ......... ....+.  .+                
T Consensus       200 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (329)
T 3gbz_A          200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS-EIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKF  278 (329)
T ss_dssp             CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             CccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC-HHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhh
Confidence            6789999988774 58999999999999999999999997532 222222211 111110  00                


Q ss_pred             ---------CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         61 ---------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        61 ---------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                               +..++.++.+|+.+||..||.+||++.++++||||++..+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          279 RGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             CCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred             ccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence                     0126789999999999999999999999999999987644

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.77  E-value=2.2e-19  Score=144.89  Aligned_cols=97  Identities=23%  Similarity=0.382  Sum_probs=73.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC--CC------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH--PE------------------   59 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~--~~------------------   59 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|.+||.... ......... .....  ..                  
T Consensus       182 t~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (308)
T 3g33_A          182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS-EADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPR  260 (308)
T ss_dssp             CCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS-HHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCC
T ss_pred             cccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhccchhhccccccCCCCCC
Confidence            678999999999999999999999999999999999997532 222221111 11110  00                  


Q ss_pred             ----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         60 ----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        60 ----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                          ....++..+.+|+.+||..||.+|||+.++++||||+..
T Consensus       261 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          261 PVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             CHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             cHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence                012467899999999999999999999999999999864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.77  E-value=3.8e-19  Score=142.30  Aligned_cols=96  Identities=25%  Similarity=0.448  Sum_probs=72.9

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh---ccCC-------------C-----
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF---HKMH-------------P-----   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~---~~~~-------------~-----   58 (222)
                      |+.|+|||.+.+ ..|+.++||||+||++|+|++|.+||..... .........   ....             +     
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T 1ob3_A          163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY  241 (288)
T ss_dssp             CCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             cccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHHCCCChhhchhhhcccccccccccc
Confidence            678999998865 4699999999999999999999999975332 222211110   0000             0     


Q ss_pred             ------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         59 ------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        59 ------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                            .....++..+.+|+.+||..||.+||++.++++||||++
T Consensus       242 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                  012347899999999999999999999999999999975

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.77  E-value=2.2e-19  Score=151.75  Aligned_cols=97  Identities=25%  Similarity=0.391  Sum_probs=72.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCC---------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHP---------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~---------------------   58 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||..... ...+.... ..+.++                     
T Consensus       262 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  340 (429)
T 3kvw_A          262 SRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE-GDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPR  340 (429)
T ss_dssp             CGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBT
T ss_pred             CCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcc
Confidence            6789999999999999999999999999999999999975322 22211110 000000                     


Q ss_pred             ---------------------------C--------CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 ---------------------------E--------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ---------------------------~--------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                                 +        .+...++.+.+|+.+||..||.+|||+.++++||||+..
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          341 YCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             TSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             cccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence                                       0        011237889999999999999999999999999999864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.77  E-value=2.9e-19  Score=142.67  Aligned_cols=98  Identities=27%  Similarity=0.417  Sum_probs=78.0

Q ss_pred             CcceecCccc----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYS----VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~----~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l   76 (222)
                      |+.|+|||.+    .+..|+.++|+||+||++|+|++|..||......................+..++..+.+|+.+||
T Consensus       172 t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  251 (290)
T 3fme_A          172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCL  251 (290)
T ss_dssp             CCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHT
T ss_pred             CccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHh
Confidence            6789999985    677899999999999999999999999975444444444433333333334568999999999999


Q ss_pred             ccCCCCCCChhhhhcCcccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..+|.+||++.++++||||+..
T Consensus       252 ~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          252 KKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             CSSGGGSCCHHHHTTSHHHHHH
T ss_pred             hcChhhCcCHHHHHhCcccccC
Confidence            9999999999999999999854

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.77  E-value=6.2e-19  Score=141.64  Aligned_cols=95  Identities=16%  Similarity=0.352  Sum_probs=74.5

Q ss_pred             CcceecCcccCCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSS---YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~---y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+.+..   ++.++||||+||++|+|++|..||... ................+.+..++..+.+|+.+||.
T Consensus       200 t~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  278 (298)
T 2zv2_A          200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-RIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLD  278 (298)
T ss_dssp             CGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTC
T ss_pred             CccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc-cHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhh
Confidence            67899999887765   478999999999999999999999742 22222222222222333345689999999999999


Q ss_pred             cCCCCCCChhhhhcCcccc
Q psy14555         78 KDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~   96 (222)
                      .+|.+||++.++++||||+
T Consensus       279 ~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          279 KNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             SCTTTSCCHHHHTTCHHHH
T ss_pred             cChhhCCCHHHHhcCcccc
Confidence            9999999999999999985

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.77  E-value=4.2e-19  Score=146.09  Aligned_cols=98  Identities=22%  Similarity=0.296  Sum_probs=78.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||...............  .....+.+..++..+.+|+.+||..
T Consensus       213 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  292 (349)
T 2w4o_A          213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVL  292 (349)
T ss_dssp             CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCS
T ss_pred             CCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccC
Confidence            67899999999999999999999999999999999999754333222222221  1222334467899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||.+||++.+++.||||.+.
T Consensus       293 dP~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          293 DPKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             SGGGSCCHHHHHHSTTTTST
T ss_pred             ChhhCcCHHHHhcCcccCCC
Confidence            99999999999999999753

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.77  E-value=3e-19  Score=148.79  Aligned_cols=99  Identities=23%  Similarity=0.418  Sum_probs=72.4

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc------------------------
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH------------------------   54 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~------------------------   54 (222)
                      |+.|+|||++.+  ..|+.++||||+||++|+|++|.+||.......... .....                        
T Consensus       198 t~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (389)
T 3gni_B          198 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPCLLDTSTIPAEELTMSPSRSV  276 (389)
T ss_dssp             TGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH-HC---------------------------
T ss_pred             cccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHhcCCCCccccccccccccccccccccc
Confidence            567999999887  689999999999999999999999997533222111 10000                        


Q ss_pred             --------------------cCCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         55 --------------------KMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        55 --------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                                          ......+..++..+.+|+.+||..||.+||++.++++||||+....
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          277 ANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             -----------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             cccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence                                0011234567889999999999999999999999999999987543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.77  E-value=1.9e-19  Score=149.71  Aligned_cols=97  Identities=26%  Similarity=0.390  Sum_probs=71.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCC---------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHP---------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~---------------------   58 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||.... ......... ..+.++                     
T Consensus       221 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (382)
T 2vx3_A          221 SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN-EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGT  299 (382)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSC
T ss_pred             CccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccc
Confidence            678999999999999999999999999999999999997532 222221111 000000                     


Q ss_pred             ---------------CCC-------------------------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 ---------------EIP-------------------------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ---------------~~~-------------------------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                     +..                         ...+..+.+||.+||..||.+|||++++++||||+..
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          300 WNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             EEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             cccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                           000                         0011478999999999999999999999999999764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.77  E-value=7.4e-19  Score=139.36  Aligned_cols=98  Identities=12%  Similarity=0.194  Sum_probs=77.0

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..+ +.++|+||+||++|+|++|..||......................+..++..+.+|+.+||..+
T Consensus       170 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  249 (276)
T 2yex_A          170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVEN  249 (276)
T ss_dssp             CGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSS
T ss_pred             ccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCC
Confidence            567999999888775 7799999999999999999999975433222222222222223334578999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.++++||||+..
T Consensus       250 p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          250 PSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             TTTSCCHHHHTTCTTTTCC
T ss_pred             chhCCCHHHHhcCccccCh
Confidence            9999999999999999764

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.77  E-value=3e-19  Score=145.54  Aligned_cols=98  Identities=22%  Similarity=0.301  Sum_probs=64.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHHhhhccC-C--CCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS-----PQAALYRVGFHKM-H--PEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~-----~~~~~~~~~~~~~-~--~~~~~~~~~~~~~li   72 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|.+||.....     ............. .  ...+..++.++++|+
T Consensus       172 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  251 (325)
T 3kn6_A          172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLI  251 (325)
T ss_dssp             ------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHH
T ss_pred             CcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHH
Confidence            5789999999999999999999999999999999999964221     1112222222111 1  112245799999999


Q ss_pred             HHhcccCCCCCCChhhhhcCcccccc
Q psy14555         73 LRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||..+|.+||++.+++.||||+..
T Consensus       252 ~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          252 QGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             HHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             HHHCCCChhHCCCHHHHhcChhhccC
Confidence            99999999999999999999999753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.77  E-value=2.7e-19  Score=152.62  Aligned_cols=97  Identities=22%  Similarity=0.356  Sum_probs=73.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC-------------------CC-
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH-------------------PE-   59 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~-------------------~~-   59 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|++||.+... ......+. ..+.+                   +. 
T Consensus       226 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~  304 (464)
T 3ttj_A          226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY  304 (464)
T ss_dssp             CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCC
T ss_pred             cccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHcchhhhhHhhccccc
Confidence            6789999999999999999999999999999999999975322 22111110 00000                   00 


Q ss_pred             --------CCc-----------cccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         60 --------IPA-----------ELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        60 --------~~~-----------~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                              .+.           ..+.++.+|+.+||..||.+|||++++++||||...
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          305 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             CCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             CCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence                    000           116779999999999999999999999999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.77  E-value=2.8e-19  Score=151.33  Aligned_cols=102  Identities=21%  Similarity=0.335  Sum_probs=79.7

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh---ccCCCCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF---HKMHPEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li   72 (222)
                      |+.|||||++.     .+.|+.++||||+||++|||++|.+||... ........+..   ....+..+..++.++++||
T Consensus       239 T~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi  317 (437)
T 4aw2_A          239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKERFQFPTQVTDVSENAKDLI  317 (437)
T ss_dssp             CGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHH
T ss_pred             CcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-ChhHHHHhhhhccccccCCcccccCCHHHHHHH
Confidence            67899999886     677999999999999999999999999753 22222222211   1122233356899999999


Q ss_pred             HHhcccCCCC--CCChhhhhcCccccccccccC
Q psy14555         73 LRCFEKDPDK--RATAGELLEDPFLADLTATRS  103 (222)
Q Consensus        73 ~~~l~~~p~~--R~s~~~~l~h~~~~~~~~~~~  103 (222)
                      .+||..+|.+  |++++++++||||++.+|...
T Consensus       318 ~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~l  350 (437)
T 4aw2_A          318 RRLICSREHRLGQNGIEDFKKHPFFSGIDWDNI  350 (437)
T ss_dssp             HTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTTG
T ss_pred             HHHhcccccccCCCCHHHHhCCCccCCCCHHHH
Confidence            9999888888  999999999999999887654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.77  E-value=2.9e-19  Score=143.05  Aligned_cols=98  Identities=57%  Similarity=0.977  Sum_probs=80.7

Q ss_pred             CcceecCcccCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSS--YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~--y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+.+..  |+.++|+||+|+++|+|++|..||...................+..+..++..+.+++.+||..
T Consensus       186 ~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  265 (295)
T 2clq_A          186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEP  265 (295)
T ss_dssp             CGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCS
T ss_pred             CccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccC
Confidence            56899999886643  8999999999999999999999997544444444444444555666778899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.||||+..
T Consensus       266 dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          266 DPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             STTTSCCHHHHHTSGGGCC-
T ss_pred             ChhhCCCHHHHhcChhhhhc
Confidence            99999999999999999854

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.77  E-value=8.5e-19  Score=142.67  Aligned_cols=98  Identities=21%  Similarity=0.384  Sum_probs=74.0

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhcc--CCCCC----------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHK--MHPEI----------------   60 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~--~~~~~----------------   60 (222)
                      |..|+|||.+.+ ..|+.++||||+||++|+|++|.+||.+.. ........ ...+  ....+                
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (324)
T 3mtl_A          163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST-VEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK  241 (324)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCC
T ss_pred             cccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChHhchhhhcchhhccccccc
Confidence            678999998776 678999999999999999999999997532 22222111 1111  11001                


Q ss_pred             ---------CccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         61 ---------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        61 ---------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                               +..++.++.+|+.+||..||.+|||++++++||||....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence                     124678899999999999999999999999999998754

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.77  E-value=5e-19  Score=147.93  Aligned_cols=100  Identities=25%  Similarity=0.370  Sum_probs=75.2

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-cc------------------CCC--
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HK------------------MHP--   58 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~------------------~~~--   58 (222)
                      |+.|+|||.+.+. .|+.++||||+||++|+|++|.+||.+... ......... .+                  .+.  
T Consensus       204 t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  282 (394)
T 4e7w_A          204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIR  282 (394)
T ss_dssp             CGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCC
T ss_pred             CcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhChhhhhhcccccc
Confidence            6789999988664 599999999999999999999999975322 222111110 00                  000  


Q ss_pred             ------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccccc
Q psy14555         59 ------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTAT  101 (222)
Q Consensus        59 ------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~~  101 (222)
                            ..+..+++++.+|+.+||..+|.+||++.+++.||||+...+.
T Consensus       283 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  331 (394)
T 4e7w_A          283 PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG  331 (394)
T ss_dssp             CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred             CCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence                  0123478899999999999999999999999999999876543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.77  E-value=5.9e-19  Score=143.19  Aligned_cols=99  Identities=26%  Similarity=0.434  Sum_probs=74.5

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccCC---------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~---------------------   57 (222)
                      |+.|+|||.+.+ ..|+.++||||+||++|+|++|.+||.... ........ ...+.+                     
T Consensus       171 t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (317)
T 2pmi_A          171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN-DEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQR  249 (317)
T ss_dssp             CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCC
T ss_pred             cccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccc
Confidence            678999998876 468999999999999999999999997532 22222111 000000                     


Q ss_pred             ----------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         58 ----------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        58 ----------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                                +..+..++..+.+|+.+||..||.+||++.++++||||+....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          250 PPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             CCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             cchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence                      0011246789999999999999999999999999999987543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.76  E-value=9e-19  Score=147.56  Aligned_cols=99  Identities=20%  Similarity=0.297  Sum_probs=75.0

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-cc--------------CCCC-----
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HK--------------MHPE-----   59 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~--------------~~~~-----   59 (222)
                      |..|+|||++.+. .|+.++||||+||++|||++|++||.+... ...+..+.. .+              ....     
T Consensus       219 t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~  297 (420)
T 1j1b_A          219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK  297 (420)
T ss_dssp             CTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCC
T ss_pred             CCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccC
Confidence            6789999988764 799999999999999999999999975322 222211110 00              0000     


Q ss_pred             -------CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         60 -------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        60 -------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                             ++...+.++.+|+.+||..+|.+||++.+++.||||.....
T Consensus       298 ~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          298 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence                   12346899999999999999999999999999999987543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.76  E-value=4e-19  Score=144.83  Aligned_cols=97  Identities=27%  Similarity=0.392  Sum_probs=76.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|.+||... .............  .....+..++..+.+|+.+||..
T Consensus       180 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  258 (326)
T 2y0a_A          180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK  258 (326)
T ss_dssp             CTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCS
T ss_pred             CcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccC
Confidence            67899999999999999999999999999999999999743 2222222221111  11122246789999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.||||+..
T Consensus       259 dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          259 DPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             SGGGSCCHHHHHHSTTTSCC
T ss_pred             ChhhCCCHHHHhcCCCccCC
Confidence            99999999999999999753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.76  E-value=7.5e-19  Score=140.73  Aligned_cols=98  Identities=20%  Similarity=0.367  Sum_probs=72.8

Q ss_pred             CcceecCcccCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCC--------------------
Q psy14555          1 MNVIFLTQYSVNSS-YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMH--------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~~~-y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~--------------------   57 (222)
                      |..|+|||.+.+.. |+.++||||+||++|+|++|..||...............  ....                    
T Consensus       164 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (292)
T 3o0g_A          164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYP  243 (292)
T ss_dssp             CGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCC
T ss_pred             ccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccccccc
Confidence            57799999887766 899999999999999999887775433333322222110  0000                    


Q ss_pred             -----CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         58 -----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        58 -----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                           ......++..+.+|+.+||..||.+|||++++++||||++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             CCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence                 01123478899999999999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.76  E-value=9.3e-19  Score=139.41  Aligned_cols=98  Identities=20%  Similarity=0.321  Sum_probs=78.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh--hccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG--FHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++||||+|+++|+|++|..||... ..........  ....+...+..+++.+.+|+.+||..
T Consensus       170 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  248 (284)
T 3kk8_A          170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV  248 (284)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCS
T ss_pred             CcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC-chhHHHHHHHhccccCCchhhcccCHHHHHHHHHHccc
Confidence            57899999999999999999999999999999999999753 2222222221  22223333457899999999999999


Q ss_pred             CCCCCCChhhhhcCccccccc
Q psy14555         79 DPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      +|.+||++.++++||||....
T Consensus       249 dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          249 NPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             STTTSCCHHHHTTSHHHHSCC
T ss_pred             ChhhCCCHHHHhcCccccCCh
Confidence            999999999999999998643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.76  E-value=5.4e-19  Score=147.43  Aligned_cols=97  Identities=23%  Similarity=0.325  Sum_probs=78.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||... ...........  .......+..++..+.+|+.+||..
T Consensus       213 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  291 (387)
T 1kob_A          213 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQK  291 (387)
T ss_dssp             SGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCS
T ss_pred             CCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999999753 22222222222  2223344567899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.||||++.
T Consensus       292 dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          292 EPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             SGGGSCCHHHHHTSTTTSSC
T ss_pred             ChhHCcCHHHHhhCccccCC
Confidence            99999999999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.76  E-value=1.2e-19  Score=148.98  Aligned_cols=98  Identities=24%  Similarity=0.421  Sum_probs=78.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-ChHHHHHH-hhh--ccCCCCCCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELG-SPQAALYR-VGF--HKMHPEIPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~-~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~li~~~l   76 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|.+||.... .....+.. ...  .......+..++..+++|+.+||
T Consensus       183 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  262 (342)
T 2qr7_A          183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKML  262 (342)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHT
T ss_pred             CccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHC
Confidence            678999999988889999999999999999999999997422 12222222 222  22223345678999999999999


Q ss_pred             ccCCCCCCChhhhhcCcccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..||.+||++.++++||||...
T Consensus       263 ~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          263 HVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             CSSTTTSCCHHHHTTSHHHHTG
T ss_pred             CCChhHCcCHHHHhcCCeecCc
Confidence            9999999999999999999753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.76  E-value=5.6e-19  Score=144.71  Aligned_cols=100  Identities=23%  Similarity=0.318  Sum_probs=74.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccCCC---------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKMHP---------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~~---------------------   58 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|.+||..... ....... ......+                     
T Consensus       202 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  280 (355)
T 2eu9_A          202 TRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN-REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWD  280 (355)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCC
T ss_pred             CCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccc
Confidence            6789999999999999999999999999999999999975322 2211111 1101000                     


Q ss_pred             --------------------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccccc
Q psy14555         59 --------------------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTAT  101 (222)
Q Consensus        59 --------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~~  101 (222)
                                          ......+..+.+|+.+||..||.+||++.++++||||.+..+.
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  343 (355)
T 2eu9_A          281 ENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE  343 (355)
T ss_dssp             TTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHH
T ss_pred             cccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChh
Confidence                                0011235678899999999999999999999999999976443

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=1.9e-19  Score=146.49  Aligned_cols=97  Identities=25%  Similarity=0.355  Sum_probs=76.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC--CCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||++.+..|+.++|+||+||++|+|++|.+||... ................  ..+..++.++.+|+.+||..
T Consensus       166 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  244 (321)
T 1tki_A          166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE-TNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVK  244 (321)
T ss_dssp             CGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCS
T ss_pred             ChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC-CHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999999753 2222222222222111  12246799999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.++++||||+..
T Consensus       245 dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          245 ERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             SGGGSCCHHHHHHSHHHHSC
T ss_pred             ChhHCcCHHHHhcChhhccC
Confidence            99999999999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.76  E-value=1.4e-18  Score=145.64  Aligned_cols=99  Identities=21%  Similarity=0.353  Sum_probs=71.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--------HHHHHHh-hhccCC-CCCCc-------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSP--------QAALYRV-GFHKMH-PEIPA-------   62 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--------~~~~~~~-~~~~~~-~~~~~-------   62 (222)
                      |+.|+|||++.+ ..|+.++||||+||++|+|++|.+||......        ...+... ...+.+ ...+.       
T Consensus       198 t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~  277 (405)
T 3rgf_A          198 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPE  277 (405)
T ss_dssp             CCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTT
T ss_pred             cCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcc
Confidence            677999998877 45999999999999999999999999643221        0111111 011111 11111       


Q ss_pred             ---------------------------cccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         63 ---------------------------ELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        63 ---------------------------~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                                                 ..+..+.+||.+||..||.+|||++++++||||....
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          278 HSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             HHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             hhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence                                       1267889999999999999999999999999998754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=8.3e-19  Score=143.52  Aligned_cols=98  Identities=21%  Similarity=0.339  Sum_probs=77.0

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCC--CCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE--IPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l   76 (222)
                      |+.|+|||.+.+  ..|+.++||||+||++|+|++|..||.... ................  .+..++..+.+|+.+||
T Consensus       237 t~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  315 (345)
T 3hko_A          237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN-DADTISQVLNKKLCFENPNYNVLSPLARDLLSNLL  315 (345)
T ss_dssp             CGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHS
T ss_pred             CccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-hHHHHHHHHhcccccCCcccccCCHHHHHHHHHHc
Confidence            678999998865  789999999999999999999999997532 2233333222222222  22457999999999999


Q ss_pred             ccCCCCCCChhhhhcCccccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      ..+|.+||++.++++||||+...
T Consensus       316 ~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          316 NRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             CSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             CCChhHCCCHHHHhcChhhccCh
Confidence            99999999999999999998753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.76  E-value=9.2e-19  Score=141.55  Aligned_cols=98  Identities=26%  Similarity=0.446  Sum_probs=79.0

Q ss_pred             CcceecCcccCC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHH
Q psy14555          1 MNVIFLTQYSVN-----------SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAK   69 (222)
Q Consensus         1 t~~y~aPe~~~~-----------~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (222)
                      |+.|+|||.+.+           ..|+.++||||+||++|+|++|..||......................+...+..+.
T Consensus       191 t~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  270 (313)
T 3cek_A          191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ  270 (313)
T ss_dssp             CGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHH
T ss_pred             CCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHH
Confidence            578999998765           578999999999999999999999997544433333333333344455666789999


Q ss_pred             HHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         70 QFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        70 ~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +++.+||..+|.+||++.++++||||+..
T Consensus       271 ~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          271 DVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             HHHHHHccCCcccCcCHHHHhcCccccCC
Confidence            99999999999999999999999999864

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.76  E-value=1.4e-18  Score=139.94  Aligned_cols=96  Identities=26%  Similarity=0.473  Sum_probs=78.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-h--hccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-G--FHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++|..||...  ........ .  ........+..++..+.+|+.+||.
T Consensus       170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~  247 (304)
T 2jam_A          170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLE  247 (304)
T ss_dssp             CCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHC
T ss_pred             CCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999999743  22222222 1  1222334456789999999999999


Q ss_pred             cCCCCCCChhhhhcCcccccc
Q psy14555         78 KDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .+|.+||++.+++.||||.+.
T Consensus       248 ~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          248 KDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             SSTTTSCCHHHHHTSHHHHSS
T ss_pred             CChhHCcCHHHHhcCccccCC
Confidence            999999999999999999753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.76  E-value=1.1e-18  Score=139.44  Aligned_cols=94  Identities=18%  Similarity=0.320  Sum_probs=72.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccC-CCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKM-HPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+. +.++.++|+||+||++|+|++|..||...  ........ ..... .......+++.+.+|+.+||..
T Consensus       189 t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  265 (285)
T 3is5_A          189 TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT--SLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTK  265 (285)
T ss_dssp             TGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCS
T ss_pred             ccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC--CHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccC
Confidence            57899999765 67899999999999999999999999753  22222222 11111 1112234789999999999999


Q ss_pred             CCCCCCChhhhhcCccccc
Q psy14555         79 DPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~   97 (222)
                      +|.+||++.+++.||||++
T Consensus       266 dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          266 DPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CTTTSCCHHHHHTSGGGGC
T ss_pred             ChhhCcCHHHHhcCHHhhc
Confidence            9999999999999999975

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.76  E-value=2.5e-19  Score=146.77  Aligned_cols=95  Identities=26%  Similarity=0.371  Sum_probs=76.5

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..| +.++||||+||++|+|++|..||......  ... ..........|..+++.+.+|+.+||..|
T Consensus       170 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~-~~i~~~~~~~p~~~s~~~~~li~~~L~~d  246 (336)
T 3h4j_B          170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP--NLF-KKVNSCVYVMPDFLSPGAQSLIRRMIVAD  246 (336)
T ss_dssp             STTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST--TCB-CCCCSSCCCCCTTSCHHHHHHHHTTSCSS
T ss_pred             CcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH--HHH-HHHHcCCCCCcccCCHHHHHHHHHHcCCC
Confidence            678999999988887 78999999999999999999999642211  111 11122334456778999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+|||++++++||||+..
T Consensus       247 P~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          247 PMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             GGGSCCHHHHTTCHHHHTT
T ss_pred             hhHCcCHHHHHhChhhccC
Confidence            9999999999999999753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=1.2e-18  Score=144.27  Aligned_cols=98  Identities=28%  Similarity=0.417  Sum_probs=74.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC---------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~---------------------   57 (222)
                      |..|+|||.+.+ ..|+.++|+||+||++|+|++|++||.+.. ....+.... ..+.+                     
T Consensus       188 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  266 (367)
T 1cm8_A          188 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD-HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLP  266 (367)
T ss_dssp             CGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSC
T ss_pred             CCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCC
Confidence            678999998877 789999999999999999999999997532 222111110 00000                     


Q ss_pred             -------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         58 -------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        58 -------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                             ...+...++.+.+|+.+||..||.+|||+.+++.||||....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          267 ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             CCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence                   012245689999999999999999999999999999998654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.75  E-value=1.8e-18  Score=138.96  Aligned_cols=97  Identities=31%  Similarity=0.565  Sum_probs=76.5

Q ss_pred             CcceecCccc-----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-CCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYS-----VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~-----~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~   74 (222)
                      |..|+|||.+     ....|+.++|+||+||++|+|++|..||.... ............ .....+..++..+.+++.+
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  258 (302)
T 2j7t_A          180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKI  258 (302)
T ss_dssp             CGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             ChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-HHHHHHHHhccCCcccCCccccCHHHHHHHHH
Confidence            5789999987     57789999999999999999999999997532 222222222221 2223356789999999999


Q ss_pred             hcccCCCCCCChhhhhcCcccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||..+|.+||++.+++.||||...
T Consensus       259 ~l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          259 ALDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             HSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             HcccChhhCCCHHHHhcChHHhhh
Confidence            999999999999999999999764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.75  E-value=7.7e-19  Score=147.59  Aligned_cols=102  Identities=25%  Similarity=0.422  Sum_probs=77.5

Q ss_pred             CcceecCcccC-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh---ccCCCCCCccccHHHHH
Q psy14555          1 MNVIFLTQYSV-------NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF---HKMHPEIPAELSDKAKQ   70 (222)
Q Consensus         1 t~~y~aPe~~~-------~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   70 (222)
                      |+.|+|||++.       ...|+.++||||+||++|||++|.+||... ........+..   ....+..+..++.++++
T Consensus       226 t~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~d  304 (412)
T 2vd5_A          226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD-STAETYGKIVHYKEHLSLPLVDEGVPEEARD  304 (412)
T ss_dssp             CGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCC----CCCHHHHH
T ss_pred             ccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC-CHHHHHHHHHhcccCcCCCccccCCCHHHHH
Confidence            67899999887       467999999999999999999999999753 22222222211   11122234678999999


Q ss_pred             HHHHhcccCCCCC---CChhhhhcCccccccccccCC
Q psy14555         71 FILRCFEKDPDKR---ATAGELLEDPFLADLTATRSS  104 (222)
Q Consensus        71 li~~~l~~~p~~R---~s~~~~l~h~~~~~~~~~~~~  104 (222)
                      ||.+||. +|.+|   +++++++.||||++.+|....
T Consensus       305 li~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l~  340 (412)
T 2vd5_A          305 FIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGLR  340 (412)
T ss_dssp             HHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTST
T ss_pred             HHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHHh
Confidence            9999999 99998   589999999999998887653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.75  E-value=5.8e-19  Score=140.45  Aligned_cols=96  Identities=23%  Similarity=0.429  Sum_probs=78.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..++.++|+||+|+++|+|++|..||...  ........ ........|..++..+.+|+.+||..+|
T Consensus       170 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p  246 (279)
T 3fdn_A          170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKR-ISRVEFTFPDFVTEGARDLISRLLKHNP  246 (279)
T ss_dssp             CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHH-HHHTCCCCCTTSCHHHHHHHHHHCCSSG
T ss_pred             CCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC--cHHHHHHH-HHhCCCCCCCcCCHHHHHHHHHHhccCh
Confidence            57899999999999999999999999999999999999742  22222222 1223344566789999999999999999


Q ss_pred             CCCCChhhhhcCccccccc
Q psy14555         81 DKRATAGELLEDPFLADLT   99 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~~   99 (222)
                      .+||++.++++||||+...
T Consensus       247 ~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          247 SQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             GGSCCHHHHHHCHHHHHHC
T ss_pred             hhCCCHHHHhhCccccCCc
Confidence            9999999999999998653

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.75  E-value=1.3e-18  Score=143.17  Aligned_cols=99  Identities=20%  Similarity=0.331  Sum_probs=73.8

Q ss_pred             CcceecCcccCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCC---------------------
Q psy14555          1 MNVIFLTQYSVNSS-YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~~~-y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~---------------------   57 (222)
                      |+.|+|||.+.+.. |+.++||||+||++|+|++|.+||.... .......... ...+                     
T Consensus       194 t~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (360)
T 3e3p_A          194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN-SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSK  272 (360)
T ss_dssp             CGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCC
T ss_pred             CcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC-hHHHHHHHHHHcCCCCHHHHHhcccchhhccccccc
Confidence            67899999886554 8999999999999999999999997532 2222211110 0000                     


Q ss_pred             --------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         58 --------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        58 --------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                              ...+...+..+.+|+.+||..+|.+||++.++++||||+....
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          273 GIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             CCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             cCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence                    1112235788999999999999999999999999999987643

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.75  E-value=1.8e-18  Score=140.32  Aligned_cols=99  Identities=25%  Similarity=0.438  Sum_probs=76.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccC-----------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKM-----------------------   56 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~-----------------------   56 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|.+||.... .......... ...                       
T Consensus       182 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (326)
T 1blx_A          182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ  260 (326)
T ss_dssp             CCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCC
T ss_pred             ccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHcCCCCcccCccccccchhhhcccCcc
Confidence            578999999999999999999999999999999999997532 2222211110 000                       


Q ss_pred             -CCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         57 -HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        57 -~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                       ....+..++..+.+|+.+||..+|.+||++.+++.||||+....
T Consensus       261 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             CGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             hhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence             00123457899999999999999999999999999999987543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.75  E-value=6.9e-19  Score=146.36  Aligned_cols=96  Identities=29%  Similarity=0.395  Sum_probs=73.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHh-hhccC------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-----QAALYRV-GFHKM------------------   56 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-----~~~~~~~-~~~~~------------------   56 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|..||......     ....... ...+.                  
T Consensus       256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  335 (397)
T 1wak_A          256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTK  335 (397)
T ss_dssp             CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCT
T ss_pred             CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCC
Confidence            67899999999999999999999999999999999999643211     1111110 00000                  


Q ss_pred             ---------------------CCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccc
Q psy14555         57 ---------------------HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        57 ---------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~   96 (222)
                                           ....+...+..+.+|+.+||..||.+||+++++++||||+
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          336 KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             TSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             ccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                                 0112344567889999999999999999999999999996

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.75  E-value=1.3e-19  Score=150.17  Aligned_cols=99  Identities=18%  Similarity=0.197  Sum_probs=76.3

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHH------hhhccCCCCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYR------VGFHKMHPEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~li   72 (222)
                      |+.|+|||.+.+  ..|+.++||||+||++|+|++|..||............      ........+.+..++..+.+|+
T Consensus       254 t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  333 (371)
T 3q60_A          254 PVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLI  333 (371)
T ss_dssp             CGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHH
T ss_pred             CcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHH
Confidence            578999999987  78999999999999999999999999753211111000      0011122233357899999999


Q ss_pred             HHhcccCCCCCCChhhhhcCccccccc
Q psy14555         73 LRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      .+||..+|.+||++.++++||||+...
T Consensus       334 ~~~L~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          334 GRFLNFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             HHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             HHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence            999999999999999999999998754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.75  E-value=1.9e-18  Score=141.92  Aligned_cols=97  Identities=22%  Similarity=0.297  Sum_probs=72.4

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh--hhccCCCCCCcc--------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAE--------------   63 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~~~~~~~~~--------------   63 (222)
                      |+.|+|||.+.+ ..|+.++||||+||++|+|++|.+||.+.. ........  ......+..+..              
T Consensus       191 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (351)
T 3mi9_A          191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK  269 (351)
T ss_dssp             CGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCS
T ss_pred             ccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCChhhccccccchhhccccccc
Confidence            567999998775 568999999999999999999999997532 22222111  111122211111              


Q ss_pred             --------------ccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         64 --------------LSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        64 --------------~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                    .++.+.+|+.+||..||.+||++.++++||||...
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          270 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             SCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             ccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence                          26779999999999999999999999999999753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.75  E-value=1.6e-18  Score=143.20  Aligned_cols=98  Identities=23%  Similarity=0.364  Sum_probs=73.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHHhh-hcc-------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS-----PQAALYRVG-FHK-------------------   55 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~-----~~~~~~~~~-~~~-------------------   55 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.....     ......... ..+                   
T Consensus       198 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  277 (373)
T 1q8y_A          198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNS  277 (373)
T ss_dssp             CGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC
T ss_pred             CccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCC
Confidence            6789999999999999999999999999999999999964221     011111100 000                   


Q ss_pred             --------------------CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 --------------------MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 --------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                          .....+...+..+.+||.+||..||.+||++.++++||||++.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  340 (373)
T 1q8y_A          278 RGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  340 (373)
T ss_dssp             --CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             cchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence                                0112345567889999999999999999999999999999864

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.75  E-value=1.3e-18  Score=143.14  Aligned_cols=96  Identities=26%  Similarity=0.508  Sum_probs=76.9

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+.   .+.|+.++||||+||++|+|++|.+||... ..............+...+..++..+.+|+.+||.
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  291 (348)
T 1u5q_A          213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ  291 (348)
T ss_dssp             CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            67899999874   577999999999999999999999999753 23333333333333333445689999999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+|.+||++.++++||||..
T Consensus       292 ~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          292 KIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             SSGGGSCCHHHHTTCHHHHS
T ss_pred             cChhhCcCHHHHhhChhhhc
Confidence            99999999999999999964

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=1.2e-18  Score=143.53  Aligned_cols=110  Identities=31%  Similarity=0.435  Sum_probs=82.5

Q ss_pred             CcceecCcccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHhhhccCCCCCCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVN--SSYSPQADIWSLGCTIVEMATGKPPFIELGS--PQAALYRVGFHKMHPEIPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~--~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l   76 (222)
                      |+.|+|||.+.+  ..|+.++||||+||++|+|++|..||.....  ....+... .....+..+..++..+.+|+.+||
T Consensus       223 t~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L  301 (355)
T 1vzo_A          223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR-ILKSEPPYPQEMSALAKDLIQRLL  301 (355)
T ss_dssp             CCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH-HHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             CcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHH-HhccCCCCCcccCHHHHHHHHHHh
Confidence            678999998875  4588999999999999999999999964222  12222222 223344566778999999999999


Q ss_pred             ccCCCCCC-----ChhhhhcCccccccccccCCCCCCCCC
Q psy14555         77 EKDPDKRA-----TAGELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        77 ~~~p~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      ..+|.+||     ++.++++||||....|.........+|
T Consensus       302 ~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~~p  341 (355)
T 1vzo_A          302 MKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAP  341 (355)
T ss_dssp             CSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred             hhCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCCCC
Confidence            99999999     999999999999877665444444333

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.75  E-value=1.5e-18  Score=140.24  Aligned_cols=97  Identities=34%  Similarity=0.592  Sum_probs=77.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|..||.... ........ .........+..++..+.+|+.+||..+
T Consensus       188 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  266 (314)
T 3com_A          188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH-PMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKS  266 (314)
T ss_dssp             CGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSC
T ss_pred             CCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCC
Confidence            567999999999999999999999999999999999997532 22222222 1222223345667999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.||||+..
T Consensus       267 p~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          267 PEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             TTTSCCHHHHTTSHHHHTC
T ss_pred             hhhCcCHHHHHhCHHHhcC
Confidence            9999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.75  E-value=9.4e-19  Score=145.58  Aligned_cols=98  Identities=24%  Similarity=0.454  Sum_probs=74.5

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC-----------------C---
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH-----------------P---   58 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~-----------------~---   58 (222)
                      |..|+|||.+.+. .|+.++||||+||++|+|++|.+||.+.. ......... ..+.+                 +   
T Consensus       204 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  282 (383)
T 3eb0_A          204 SRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET-SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK  282 (383)
T ss_dssp             CSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCC
T ss_pred             CCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccC
Confidence            5779999987765 59999999999999999999999997532 222221111 00000                 0   


Q ss_pred             ------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         59 ------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        59 ------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                            ..+...+..+.+|+.+||..+|.+|||+.++++||||....
T Consensus       283 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          283 AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred             cccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence                  02345788999999999999999999999999999998653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.75  E-value=1.1e-18  Score=144.75  Aligned_cols=97  Identities=22%  Similarity=0.362  Sum_probs=72.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-cC-------------------CCCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-KM-------------------HPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~~-------------------~~~~   60 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.+.. ........... +.                   .+..
T Consensus       189 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (371)
T 2xrw_A          189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD-HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY  267 (371)
T ss_dssp             -CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCC
T ss_pred             cCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccc
Confidence            678999999999999999999999999999999999997532 22221111100 00                   0000


Q ss_pred             --------------C------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         61 --------------P------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        61 --------------~------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                    |      ...+..+++|+.+||..||.+|||++++++||||...
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          268 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             CCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             cccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence                          0      1126789999999999999999999999999999754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.75  E-value=1.1e-18  Score=140.86  Aligned_cols=99  Identities=22%  Similarity=0.456  Sum_probs=73.2

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-h-c-----------------cCCCCC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-F-H-----------------KMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~-~-----------------~~~~~~   60 (222)
                      |..|+|||.+.+ ..|+.++|+||+||++|+|++|.+||.+... ........ . .                 ....+.
T Consensus       165 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (311)
T 4agu_A          165 TRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD-VDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD  243 (311)
T ss_dssp             -GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCC
T ss_pred             CccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhcccccccccccccccccccCcCCC
Confidence            567999998765 6789999999999999999999999975322 22211110 0 0                 000000


Q ss_pred             ----------CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         61 ----------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        61 ----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                                ...++..+.+|+.+||..+|.+|||++++++||||++...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             CSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             ccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence                      1356888999999999999999999999999999987543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.75  E-value=5.6e-19  Score=146.65  Aligned_cols=97  Identities=24%  Similarity=0.361  Sum_probs=77.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.+. .............  .....+..++..+.+|+.+||..
T Consensus       251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  329 (373)
T 2x4f_A          251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD-NDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIK  329 (373)
T ss_dssp             SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCS
T ss_pred             CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999999753 2222222222211  22222356799999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.++++||||...
T Consensus       330 dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          330 EKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             SGGGSCCHHHHHHSHHHHCH
T ss_pred             ChhhCCCHHHHhcCcCcCCC
Confidence            99999999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.75  E-value=7.7e-19  Score=144.68  Aligned_cols=95  Identities=23%  Similarity=0.374  Sum_probs=71.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCC---------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHP---------------------   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~---------------------   58 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|.+||.... ......... .....+                     
T Consensus       222 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  300 (360)
T 3llt_A          222 TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE-HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDEL  300 (360)
T ss_dssp             CGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTT
T ss_pred             cccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc-HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccc
Confidence            678999999999999999999999999999999999997532 222211111 000000                     


Q ss_pred             --CCC--------------------ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccc
Q psy14555         59 --EIP--------------------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        59 --~~~--------------------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~   96 (222)
                        .+|                    ...+..+.+|+.+||..||.+|||++++++||||+
T Consensus       301 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          301 KLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             EECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             eecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence              000                    11236778999999999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.75  E-value=1.3e-18  Score=142.79  Aligned_cols=99  Identities=26%  Similarity=0.436  Sum_probs=73.8

Q ss_pred             CcceecCcccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccCC---------------------
Q psy14555          1 MNVIFLTQYSV-NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~-~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~---------------------   57 (222)
                      |+.|+|||.+. +..|+.++||||+||++|+|++|.+||.+... ....... ...+.+                     
T Consensus       185 t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
T 2b9h_A          185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY-RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSL  263 (353)
T ss_dssp             CGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTS
T ss_pred             cccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCchhccccccccchhhHHhhcc
Confidence            56799999765 47899999999999999999999999975322 2211111 100000                     


Q ss_pred             ---C-----CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         58 ---P-----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        58 ---~-----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                         +     ..+..++..+.+|+.+||..||.+||++.++++||||+....
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          264 PMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             cCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence               0     011357889999999999999999999999999999987543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.75  E-value=3e-18  Score=145.73  Aligned_cols=102  Identities=22%  Similarity=0.365  Sum_probs=71.9

Q ss_pred             CcceecCccc-CCCCCCchhhHHHHHHHHHHHHh-----------CCCCCCCCCCh-------------------HHHHH
Q psy14555          1 MNVIFLTQYS-VNSSYSPQADIWSLGCTIVEMAT-----------GKPPFIELGSP-------------------QAALY   49 (222)
Q Consensus         1 t~~y~aPe~~-~~~~y~~~~DiWS~Gvil~ell~-----------g~~Pf~~~~~~-------------------~~~~~   49 (222)
                      |+.|+|||++ ....|+.++||||+||++|||++           |.++|.+....                   ...+.
T Consensus       246 t~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~  325 (458)
T 3rp9_A          246 TRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLN  325 (458)
T ss_dssp             CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHH
T ss_pred             cccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHH
Confidence            5679999975 56779999999999999999998           67777542210                   00000


Q ss_pred             Hh-hhcc---------------------CC-------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         50 RV-GFHK---------------------MH-------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        50 ~~-~~~~---------------------~~-------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                      .+ ...+                     .+       .......+.++.+|+.+||..||.+|||++++++||||+...+
T Consensus       326 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          326 VIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             HHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             HHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence            00 0000                     00       0112345899999999999999999999999999999998765


Q ss_pred             cc
Q psy14555        101 TR  102 (222)
Q Consensus       101 ~~  102 (222)
                      ..
T Consensus       406 ~~  407 (458)
T 3rp9_A          406 AE  407 (458)
T ss_dssp             GG
T ss_pred             Cc
Confidence            44

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.74  E-value=1.4e-18  Score=140.68  Aligned_cols=92  Identities=29%  Similarity=0.353  Sum_probs=72.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+ .|+.++||||+||++|+|++|..|+..  ..  ...........+..+..++..+.+|+.+||..+|
T Consensus       219 t~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  293 (311)
T 3p1a_A          219 DPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG--GE--GWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDP  293 (311)
T ss_dssp             CGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS--HH--HHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSST
T ss_pred             CccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC--cc--HHHHHhccCCCcccccCCCHHHHHHHHHHcCCCh
Confidence            678999998775 799999999999999999999776642  11  1111112222223345678999999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+||++.++++||||++
T Consensus       294 ~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          294 KLRATAEALLALPVLRQ  310 (311)
T ss_dssp             TTSCCHHHHHTSGGGSC
T ss_pred             hhCcCHHHHHhCccccC
Confidence            99999999999999974

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.74  E-value=1e-18  Score=139.35  Aligned_cols=95  Identities=20%  Similarity=0.337  Sum_probs=78.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++|..||...  ........ ........+..++..+.+++.+||..+|
T Consensus       175 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p  251 (284)
T 2vgo_A          175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--SHTETHRR-IVNVDLKFPPFLSDGSKDLISKLLRYHP  251 (284)
T ss_dssp             CGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHH-HHTTCCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC--CHhHHHHH-HhccccCCCCcCCHHHHHHHHHHhhcCH
Confidence            57899999999999999999999999999999999999743  22222222 1223345567789999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.+++.||||+..
T Consensus       252 ~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          252 PQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             GGSCCHHHHHTCHHHHHH
T ss_pred             hhCCCHHHHhhCHHHHhh
Confidence            999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.74  E-value=1.2e-18  Score=143.98  Aligned_cols=98  Identities=22%  Similarity=0.346  Sum_probs=74.0

Q ss_pred             CcceecCcccCCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHhhhccCCCCCCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVNSSYSPQ-ADIWSLGCTIVEMATGKPPFIELGSP---QAALYRVGFHKMHPEIPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~-~DiWS~Gvil~ell~g~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l   76 (222)
                      |+.|+|||++.+..|..+ +||||+||++|+|++|.+||......   ...+..........+.+..++..+.+|+.+||
T Consensus       180 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L  259 (361)
T 3uc3_A          180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIF  259 (361)
T ss_dssp             -CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHS
T ss_pred             CCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHc
Confidence            678999999988888765 89999999999999999999743221   11122222222233333467999999999999


Q ss_pred             ccCCCCCCChhhhhcCcccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..+|.+||++.+++.||||...
T Consensus       260 ~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          260 VADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             CSCTTTSCCHHHHHTSHHHHTT
T ss_pred             cCChhHCcCHHHHHhCcchhcC
Confidence            9999999999999999999753

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=3.5e-18  Score=140.23  Aligned_cols=98  Identities=19%  Similarity=0.244  Sum_probs=73.4

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh---ccCCCC-----------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF---HKMHPE-----------------   59 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~---~~~~~~-----------------   59 (222)
                      |+.|+|||.+.+ ..|+.++||||+||++|+|++|.+||.+. ...........   ......                 
T Consensus       175 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (346)
T 1ua2_A          175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD-SDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP  253 (346)
T ss_dssp             CCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCC
T ss_pred             cccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHHcCCCChhhhhhhccCcccccccccC
Confidence            678999998865 45899999999999999999999999753 22222222111   000000                 


Q ss_pred             -C-----CccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         60 -I-----PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        60 -~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                       .     +...+..+.+|+.+||..+|.+||++.++++||||....
T Consensus       254 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          254 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             CCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence             0     134578999999999999999999999999999998653

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.74  E-value=2e-18  Score=140.39  Aligned_cols=97  Identities=24%  Similarity=0.334  Sum_probs=73.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh--hhccCC---------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~~~---------------------   57 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||..... .......  .....+                     
T Consensus       197 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  275 (339)
T 1z57_A          197 TRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS-KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWD  275 (339)
T ss_dssp             CGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH-HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCC
T ss_pred             CccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHhhccchhHHhhcccccc
Confidence            6789999999999999999999999999999999999975322 2211111  000000                     


Q ss_pred             -------------------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         58 -------------------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        58 -------------------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                         ...+...+..+.+|+.+||..||.+||++.++++||||+..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          276 EHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             TTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             ccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                               01112346788999999999999999999999999999864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.74  E-value=2.4e-18  Score=139.75  Aligned_cols=97  Identities=24%  Similarity=0.365  Sum_probs=76.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC--CCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--HPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++|..||... ..............  ....+...+..+.+|+.+||..
T Consensus       181 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~  259 (321)
T 2a2a_A          181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVK  259 (321)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCS
T ss_pred             CCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999999743 22222222211111  1112245789999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.||||...
T Consensus       260 dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          260 ETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             STTTSCCHHHHHHSTTTSCS
T ss_pred             ChhhCcCHHHHhcCccccCC
Confidence            99999999999999999753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.74  E-value=6.4e-19  Score=142.50  Aligned_cols=98  Identities=26%  Similarity=0.444  Sum_probs=73.0

Q ss_pred             CcceecCcccCC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-------------HHHHHHhhhccCCCCCC-
Q psy14555          1 MNVIFLTQYSVN-----SSYSPQADIWSLGCTIVEMATGKPPFIELGSP-------------QAALYRVGFHKMHPEIP-   61 (222)
Q Consensus         1 t~~y~aPe~~~~-----~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-------------~~~~~~~~~~~~~~~~~-   61 (222)
                      |..|+|||.+..     ..|+.++||||+||++|+|++|.+||......             .......... .....+ 
T Consensus       184 t~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~  262 (316)
T 2ac3_A          184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE-GKYEFPD  262 (316)
T ss_dssp             SGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHH-CCCCCCH
T ss_pred             CcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhc-cCcccCc
Confidence            568999998865     56899999999999999999999999753211             1112111111 112222 


Q ss_pred             ---ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         62 ---AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        62 ---~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                         ..++..+.+|+.+||..||.+||++.++++||||++..
T Consensus       263 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence               35789999999999999999999999999999998653

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.74  E-value=2e-18  Score=145.91  Aligned_cols=98  Identities=21%  Similarity=0.296  Sum_probs=72.5

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCC-CCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMH-PEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||++.   ...++.++||||+||++|+|++ |.+||..... ............. ...+...+..+.+|+.+|
T Consensus       189 t~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  267 (432)
T 3p23_A          189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-RQANILLGACSLDCLHPEKHEDVIARELIEKM  267 (432)
T ss_dssp             CTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-HHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHH
T ss_pred             CcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-HHHHHHhccCCccccCccccccHHHHHHHHHH
Confidence            67899999987   4677889999999999999999 9999954222 2222221111111 122344567789999999


Q ss_pred             cccCCCCCCChhhhhcCccccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      |..+|.+||++.++++||||....
T Consensus       268 L~~dP~~Rps~~evl~hp~f~~~~  291 (432)
T 3p23_A          268 IAMDPQKRPSAKHVLKHPFFWSLE  291 (432)
T ss_dssp             SCSSGGGSCCHHHHHTSTTTCCHH
T ss_pred             HhCCHhhCCCHHHHHhCccccChH
Confidence            999999999999999999998653

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.74  E-value=1.8e-18  Score=142.60  Aligned_cols=100  Identities=26%  Similarity=0.449  Sum_probs=76.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHH--------------------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL--------------------------------   48 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~--------------------------------   48 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||..........                                
T Consensus       193 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (360)
T 3eqc_A          193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSR  272 (360)
T ss_dssp             CCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------------
T ss_pred             CCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCC
Confidence            678999999999999999999999999999999999997432111100                                


Q ss_pred             --------HHhhhccCCCCC-CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         49 --------YRVGFHKMHPEI-PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        49 --------~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                              .........+.. +..++..+.+|+.+||..+|.+||++++++.||||+...+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  333 (360)
T 3eqc_A          273 PPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  333 (360)
T ss_dssp             -CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             CcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence                    000011111122 2346889999999999999999999999999999987543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.74  E-value=1.1e-17  Score=141.49  Aligned_cols=102  Identities=22%  Similarity=0.377  Sum_probs=71.5

Q ss_pred             CcceecCccc-CCCCCCchhhHHHHHHHHHHHHhC-----------CCCCCCCCC----------------hHHHHHH--
Q psy14555          1 MNVIFLTQYS-VNSSYSPQADIWSLGCTIVEMATG-----------KPPFIELGS----------------PQAALYR--   50 (222)
Q Consensus         1 t~~y~aPe~~-~~~~y~~~~DiWS~Gvil~ell~g-----------~~Pf~~~~~----------------~~~~~~~--   50 (222)
                      |+.|+|||.+ ....|+.++||||+||++|||++|           .++|.+.+.                ....+..  
T Consensus       214 t~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~  293 (432)
T 3n9x_A          214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIF  293 (432)
T ss_dssp             CCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHH
T ss_pred             CccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHH
Confidence            6679999975 566799999999999999999984           444443210                0000000  


Q ss_pred             ---------------------h-hhccCCCCC-----CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccccc
Q psy14555         51 ---------------------V-GFHKMHPEI-----PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTATR  102 (222)
Q Consensus        51 ---------------------~-~~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~~~  102 (222)
                                           . .........     ...+++.+.+|+.+||..||.+|||+.++++||||+...+..
T Consensus       294 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~  372 (432)
T 3n9x_A          294 NIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKK  372 (432)
T ss_dssp             HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTT
T ss_pred             HhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcc
Confidence                                 0 000000111     135789999999999999999999999999999999875543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.74  E-value=3.1e-18  Score=139.30  Aligned_cols=99  Identities=26%  Similarity=0.399  Sum_probs=74.3

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-------------hcc-----------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-------------FHK-----------   55 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-------------~~~-----------   55 (222)
                      |..|+|||.+.+ ..|+.++||||+||++|+|++|..||.........+....             ...           
T Consensus       193 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (330)
T 3nsz_A          193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL  272 (330)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred             cccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhh
Confidence            567999998877 6799999999999999999999999954333222211110             000           


Q ss_pred             -----------CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         56 -----------MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        56 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                                 .....+..++..+.+|+.+||..||.+|||++++++||||+...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          273 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             hhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence                       01111233789999999999999999999999999999998653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.74  E-value=2.1e-18  Score=142.86  Aligned_cols=98  Identities=23%  Similarity=0.370  Sum_probs=74.0

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhccC----------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFHKM----------------------   56 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~~~----------------------   56 (222)
                      |..|+|||.+.+ ..|+.++||||+||++|+|++|++||.+... ...+... ...+.                      
T Consensus       192 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~  270 (367)
T 2fst_X          192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESARNYIQSLT  270 (367)
T ss_dssp             CCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSC
T ss_pred             CcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccC
Confidence            678999998877 7899999999999999999999999975322 2211111 00000                      


Q ss_pred             -CCCC-----CccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         57 -HPEI-----PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        57 -~~~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                       .+..     ....++.+.+|+.+||..||.+||++.+++.||||....
T Consensus       271 ~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          271 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             CCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence             0000     124578899999999999999999999999999998754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.74  E-value=1.1e-18  Score=138.77  Aligned_cols=95  Identities=25%  Similarity=0.469  Sum_probs=59.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..++.++|+||+||++|+|++|..||...... .....  ........|..++..+.+++.+||..+|
T Consensus       175 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dp  251 (278)
T 3cok_A          175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-NTLNK--VVLADYEMPSFLSIEAKDLIHQLLRRNP  251 (278)
T ss_dssp             -----------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------CCSSCCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-HHHHH--HhhcccCCccccCHHHHHHHHHHcccCH
Confidence            56799999999999999999999999999999999999743221 11111  1122334566789999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.+++.||||...
T Consensus       252 ~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          252 ADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             GGSCCHHHHTTSTTTC--
T ss_pred             hhCCCHHHHhcCccccCC
Confidence            999999999999999764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.74  E-value=4e-18  Score=141.28  Aligned_cols=98  Identities=28%  Similarity=0.418  Sum_probs=74.4

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCC---------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~---------------------   57 (222)
                      |+.|+|||.+.+ ..|+.++||||+||++|+|++|..||.+.. .......... .+.+                     
T Consensus       204 t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (371)
T 4exu_A          204 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP  282 (371)
T ss_dssp             CCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSC
T ss_pred             CccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccC
Confidence            678999998877 789999999999999999999999997532 2221111100 0000                     


Q ss_pred             --C-----CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         58 --P-----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        58 --~-----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                        .     ..+...+..+.+|+.+||..+|.+||++.++++||||+...
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          283 QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             CCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             CCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence              0     01234689999999999999999999999999999998653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.73  E-value=1.6e-18  Score=145.98  Aligned_cols=98  Identities=30%  Similarity=0.454  Sum_probs=73.9

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH--HHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA--LYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||++.   ...|+.++||||+||++|+|++|.+||.........  ..........+..+..++..+.+|+.+|
T Consensus       304 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  383 (419)
T 3i6u_A          304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL  383 (419)
T ss_dssp             -CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHH
T ss_pred             CCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHH
Confidence            67899999875   367889999999999999999999999753222111  1111111122222346789999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |..+|.+||++.++++||||+..
T Consensus       384 L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          384 LVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             SCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             ccCChhHCcCHHHHhCCcccCCh
Confidence            99999999999999999999864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.73  E-value=3e-18  Score=141.60  Aligned_cols=98  Identities=21%  Similarity=0.368  Sum_probs=72.7

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-----------------------C
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-----------------------M   56 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-----------------------~   56 (222)
                      |+.|+|||.+.+ ..|+.++||||+||++|+|++|.+||................+                       .
T Consensus       194 t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (364)
T 3qyz_A          194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPH  273 (364)
T ss_dssp             CGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCC
T ss_pred             ccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCC
Confidence            677999997654 4589999999999999999999999975432221111100000                       0


Q ss_pred             CCC-----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         57 HPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        57 ~~~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ...     ....++..+.+|+.+||..||.+||++.++++||||+..
T Consensus       274 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          274 KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             CCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             ccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            001     113468899999999999999999999999999999875

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.73  E-value=2.8e-18  Score=139.34  Aligned_cols=96  Identities=28%  Similarity=0.546  Sum_probs=74.6

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |..|+|||.+.     +..|+.++||||+||++|+|++|..||.... .................+..++..+.+|+.+|
T Consensus       192 ~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  270 (326)
T 2x7f_A          192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKKWSKKFQSFIESC  270 (326)
T ss_dssp             CGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHH
T ss_pred             CccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHhhcCccccCCccccCHHHHHHHHHH
Confidence            57899999887     5679999999999999999999999997532 22223222222233333456799999999999


Q ss_pred             cccCCCCCCChhhhhcCccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      |..+|.+||++.+++.||||+.
T Consensus       271 l~~dp~~Rps~~~ll~hp~~~~  292 (326)
T 2x7f_A          271 LVKNHSQRPATEQLMKHPFIRD  292 (326)
T ss_dssp             CCSSGGGSCCHHHHHTSHHHHC
T ss_pred             hccChhhCCCHHHHhhChHHhh
Confidence            9999999999999999999975

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.73  E-value=3.2e-18  Score=135.95  Aligned_cols=96  Identities=27%  Similarity=0.445  Sum_probs=78.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..|+.++|+||+|+++|+|++|..||...  .................+..++..+.+++.+||..+|
T Consensus       179 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p  256 (279)
T 2w5a_A          179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKD  256 (279)
T ss_dssp             CCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCc
Confidence            56799999999999999999999999999999999999743  2233333333334445667789999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.+++.|+|+...
T Consensus       257 ~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          257 YHRPSVEEILENPLILEH  274 (279)
T ss_dssp             GGSCCHHHHHTSTTCCGG
T ss_pred             ccCCCHHHHHhChhhhhh
Confidence            999999999999998754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.73  E-value=1.1e-17  Score=137.42  Aligned_cols=98  Identities=28%  Similarity=0.395  Sum_probs=74.8

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-c------------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-H------------------------   54 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~------------------------   54 (222)
                      |+.|+|||.+.+ ..|+.++|+||+||++|+|++|..||.+.. .......... .                        
T Consensus       186 t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
T 3coi_A          186 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-YLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP  264 (353)
T ss_dssp             SBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC-HHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSC
T ss_pred             CcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCc
Confidence            678999998876 789999999999999999999999997532 2211111100 0                        


Q ss_pred             ----cCCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         55 ----KMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        55 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                          ......+...+..+.+|+.+||..+|.+||++.+++.||||+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          265 QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             BCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             CCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence                001122346789999999999999999999999999999998653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.73  E-value=3.4e-18  Score=137.56  Aligned_cols=95  Identities=33%  Similarity=0.544  Sum_probs=78.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|.+||... . .............+..+..++..+.+|+.+||..+|
T Consensus       182 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  259 (303)
T 3a7i_A          182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-H-PMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP  259 (303)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-C-HHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSG
T ss_pred             CcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc-C-HHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCCh
Confidence            56799999999999999999999999999999999999753 2 222222223334455667789999999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+||++.+++.||||..
T Consensus       260 ~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          260 SFRPTAKELLKHKFILR  276 (303)
T ss_dssp             GGSCCHHHHTTCHHHHH
T ss_pred             hhCcCHHHHhhChhhhc
Confidence            99999999999999965

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.73  E-value=2.3e-18  Score=140.89  Aligned_cols=88  Identities=22%  Similarity=0.415  Sum_probs=73.8

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..| +.++||||+||++|+|++|..||.....         ........+..++..+.+|+.+||..+
T Consensus       192 t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~~~~~~~~~~l~~li~~~L~~d  262 (335)
T 3dls_A          192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---------TVEAAIHPPYLVSKELMSLVSGLLQPV  262 (335)
T ss_dssp             CGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------GTTTCCCCSSCCCHHHHHHHHHHTCSS
T ss_pred             CccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------HHhhccCCCcccCHHHHHHHHHHccCC
Confidence            678999999888877 8899999999999999999999963211         112223345568999999999999999


Q ss_pred             CCCCCChhhhhcCccccc
Q psy14555         80 PDKRATAGELLEDPFLAD   97 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~   97 (222)
                      |.+||++.+++.||||+.
T Consensus       263 P~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          263 PERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             GGGSCCHHHHHHCTTTTC
T ss_pred             hhhCcCHHHHhcCccccC
Confidence            999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.72  E-value=5e-18  Score=143.56  Aligned_cols=98  Identities=24%  Similarity=0.305  Sum_probs=74.4

Q ss_pred             CcceecCcccCC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhcc--CCCCCCccccHHHHH
Q psy14555          1 MNVIFLTQYSVN-------SSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHK--MHPEIPAELSDKAKQ   70 (222)
Q Consensus         1 t~~y~aPe~~~~-------~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   70 (222)
                      |+.|+|||++.+       ..|+.++||||+||++|+|++ |..||.........+.......  .....+..++.++.+
T Consensus       195 t~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  274 (434)
T 2rio_A          195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD  274 (434)
T ss_dssp             CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHH
T ss_pred             CCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHH
Confidence            678999998865       679999999999999999999 9999965333222222211111  111123456789999


Q ss_pred             HHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         71 FILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        71 li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |+.+||..+|.+||++.++++||||...
T Consensus       275 li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          275 LISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             HHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence            9999999999999999999999999753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.72  E-value=2.2e-18  Score=147.24  Aligned_cols=95  Identities=21%  Similarity=0.289  Sum_probs=77.0

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..| +.++||||+||++|+|++|..||..... .. ...... ......|..+++.+.+|+.+||..+
T Consensus       178 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~-~~~~i~-~~~~~~p~~~s~~~~~Li~~~L~~d  254 (476)
T 2y94_A          178 SPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-PT-LFKKIC-DGIFYTPQYLNPSVISLLKHMLQVD  254 (476)
T ss_dssp             CSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-HH-HHHHHH-TTCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-HH-HHHHHh-cCCcCCCccCCHHHHHHHHHHcCCC
Confidence            678999999988876 6899999999999999999999975322 22 222222 2233456678999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.||||+..
T Consensus       255 P~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          255 PMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             TTTSCCHHHHHTCHHHHTT
T ss_pred             chhCcCHHHHHhCHHhhhc
Confidence            9999999999999999853

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.72  E-value=1.1e-18  Score=142.74  Aligned_cols=98  Identities=23%  Similarity=0.377  Sum_probs=62.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH-----HHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA-----LYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.........     .........+...+..++..+.+|+.+|
T Consensus       192 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  271 (336)
T 3fhr_A          192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLL  271 (336)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHH
T ss_pred             CcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999999643221110     0111112223333457899999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |..+|.+||++.++++||||...
T Consensus       272 L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          272 LKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             CCCChhHCcCHHHHhcCcccccc
Confidence            99999999999999999999753

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.72  E-value=8.5e-18  Score=135.15  Aligned_cols=97  Identities=19%  Similarity=0.233  Sum_probs=76.4

Q ss_pred             CcceecCcccCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSS--YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~--y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+.+..  ++.++||||+||++|+|++|..||...  .......... ......+..++..+.+|+.+||..
T Consensus       174 ~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~-~~~~~~~~~~~~~l~~li~~~l~~  250 (305)
T 2wtk_C          174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD--NIYKLFENIG-KGSYAIPGDCGPPLSDLLKGMLEY  250 (305)
T ss_dssp             CGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHH-HCCCCCCSSSCHHHHHHHHHHTCS
T ss_pred             CCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHh-cCCCCCCCccCHHHHHHHHHHccC
Confidence            57899999887644  478999999999999999999999742  2222222211 223345667899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccccc
Q psy14555         79 DPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                      +|.+||++.++++||||+....
T Consensus       251 dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          251 EPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             STTTSCCHHHHHHSHHHHSCCC
T ss_pred             ChhhCCCHHHHhcCcccccCCC
Confidence            9999999999999999986543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.72  E-value=7.6e-18  Score=137.96  Aligned_cols=96  Identities=27%  Similarity=0.376  Sum_probs=75.3

Q ss_pred             CcceecCcccCCC-CCCc-hhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC-----------------
Q psy14555          1 MNVIFLTQYSVNS-SYSP-QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP-----------------   61 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~-~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-----------------   61 (222)
                      |..|+|||.+.+. .|+. ++|+||+||++|+|++|..||................  ....+                 
T Consensus       213 ~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~  290 (348)
T 2pml_X          213 TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK--NIEYPLDRNHFLYPLTNKKSTC  290 (348)
T ss_dssp             CGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC--CCCCCCSSSSSTTTTCC-----
T ss_pred             CcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc--CcCCccchhhhhcccccccccc
Confidence            5789999998887 6777 9999999999999999999997543323332222211  11222                 


Q ss_pred             --ccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         62 --AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        62 --~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                        ..++..+.+|+.+||..+|.+||++.++++||||...
T Consensus       291 ~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          291 SNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             ---CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             chhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence              5678999999999999999999999999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.72  E-value=3.5e-18  Score=135.64  Aligned_cols=94  Identities=23%  Similarity=0.389  Sum_probs=73.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCC----ccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIP----AELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l   76 (222)
                      |+.|+|||.+.+ .|+.++|+||+|+++|+|++|..||... .............  ...+    ..++..+.+|+.+||
T Consensus       171 t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l  246 (277)
T 3f3z_A          171 TPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAP-TDSEVMLKIREGT--FTFPEKDWLNVSPQAESLIRRLL  246 (277)
T ss_dssp             CTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHT
T ss_pred             CCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhCC--CCCCchhhhcCCHHHHHHHHHHc
Confidence            678999998765 5999999999999999999999999753 2222222222211  1222    257899999999999


Q ss_pred             ccCCCCCCChhhhhcCcccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..+|.+||++.+++.||||+..
T Consensus       247 ~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          247 TKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             CSSTTTSCCHHHHTTSHHHHHH
T ss_pred             cCChhhCcCHHHHhcCHHHhcc
Confidence            9999999999999999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.72  E-value=4.7e-18  Score=140.61  Aligned_cols=94  Identities=23%  Similarity=0.404  Sum_probs=72.7

Q ss_pred             CcceecCcccC------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCC--CCccccHHHHHH
Q psy14555          1 MNVIFLTQYSV------NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPE--IPAELSDKAKQF   71 (222)
Q Consensus         1 t~~y~aPe~~~------~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l   71 (222)
                      |+.|+|||++.      ...|+.++||||+||++|+|++|..||...  ......... .......  .+...+..+.+|
T Consensus       262 t~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  339 (365)
T 2y7j_A          262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--RQILMLRMIMEGQYQFSSPEWDDRSSTVKDL  339 (365)
T ss_dssp             CGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCHHHHSSSCHHHHHH
T ss_pred             CCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCCcccccCCHHHHHH
Confidence            67899999875      346899999999999999999999999743  222222221 1111111  124578899999


Q ss_pred             HHHhcccCCCCCCChhhhhcCcccc
Q psy14555         72 ILRCFEKDPDKRATAGELLEDPFLA   96 (222)
Q Consensus        72 i~~~l~~~p~~R~s~~~~l~h~~~~   96 (222)
                      +.+||..+|.+||++.++++||||+
T Consensus       340 i~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          340 ISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             HHHHcCCChhHCcCHHHHhcCcccC
Confidence            9999999999999999999999996

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.72  E-value=6.4e-18  Score=135.35  Aligned_cols=95  Identities=27%  Similarity=0.492  Sum_probs=77.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..++.++|+||+|+++|+|++|..||... .........  .......+..++..+.+++.+||..+|
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p  254 (294)
T 2rku_A          178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRI--KKNEYSIPKHINPVAASLIQKMLQTDP  254 (294)
T ss_dssp             CCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHH--HTTCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHH--hhccCCCccccCHHHHHHHHHHcccCh
Confidence            56799999999999999999999999999999999999743 222222222  222344566789999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.++++||||...
T Consensus       255 ~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          255 TARPTINELLNDEFFTSG  272 (294)
T ss_dssp             GGSCCGGGGGGSHHHHTS
T ss_pred             hhCcCHHHHhhChheecC
Confidence            999999999999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.72  E-value=2.6e-18  Score=140.08  Aligned_cols=97  Identities=27%  Similarity=0.478  Sum_probs=73.1

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--c-----------------cCC-C-
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--H-----------------KMH-P-   58 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~-----------------~~~-~-   58 (222)
                      |..|+|||.+.+. .|+.++||||+||++|+|++|.+||.... ..........  .                 ... + 
T Consensus       187 t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (331)
T 4aaa_A          187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS-DIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPE  265 (331)
T ss_dssp             CCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCC
T ss_pred             CccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCChhhhhHhhhccccccccCcc
Confidence            5679999988775 78999999999999999999999997532 2222211100  0                 000 0 


Q ss_pred             ---C-----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 ---E-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ---~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                         .     ....++..+.+|+.+||..+|.+||++.++++||||+..
T Consensus       266 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          266 IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             CSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             ccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence               0     012468899999999999999999999999999999754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.72  E-value=3.2e-18  Score=136.17  Aligned_cols=93  Identities=23%  Similarity=0.268  Sum_probs=73.3

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+. .++.++||||+||++|+|++|.+|+..  .....   .......+..+..++..+.+|+.+||..+
T Consensus       193 t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~d  267 (289)
T 1x8b_A          193 DSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN--GDQWH---EIRQGRLPRIPQVLSQEFTELLKVMIHPD  267 (289)
T ss_dssp             CGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS--SHHHH---HHHTTCCCCCSSCCCHHHHHHHHHHTCSS
T ss_pred             CccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc--hhHHH---HHHcCCCCCCCcccCHHHHHHHHHHhCCC
Confidence            6789999988766 667899999999999999999887742  22111   12233445566788999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.++++||||...
T Consensus       268 p~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          268 PERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             GGGSCCHHHHHTCTTC---
T ss_pred             cccCCCHHHHhhChHhhhh
Confidence            9999999999999999753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.71  E-value=8e-18  Score=136.01  Aligned_cols=97  Identities=27%  Similarity=0.467  Sum_probs=74.1

Q ss_pred             CcceecCcccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCC--CccccHHHHHHHH
Q psy14555          1 MNVIFLTQYSV-----NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI--PAELSDKAKQFIL   73 (222)
Q Consensus         1 t~~y~aPe~~~-----~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~   73 (222)
                      |+.|+|||.+.     ...|+.++||||+||++|+|++|..||.......... ........+..  ...++..+.+|+.
T Consensus       187 ~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~  265 (318)
T 2dyl_A          187 CAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL-TKVLQEEPPLLPGHMGFSGDFQSFVK  265 (318)
T ss_dssp             CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH-HHHHHSCCCCCCSSSCCCHHHHHHHH
T ss_pred             CccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH-HHHhccCCCCCCccCCCCHHHHHHHH
Confidence            57899999884     5678999999999999999999999997533333322 22222222222  2457899999999


Q ss_pred             HhcccCCCCCCChhhhhcCcccccc
Q psy14555         74 RCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        74 ~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +||..+|.+||++.+++.||||+..
T Consensus       266 ~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          266 DCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             HHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             HHccCChhHCcCHHHHhhCHHHHhc
Confidence            9999999999999999999999764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.71  E-value=4.6e-18  Score=134.82  Aligned_cols=95  Identities=22%  Similarity=0.320  Sum_probs=73.1

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..+ +.++|+||+|+++|+|++|..||...  .......... ......+..++..+.+++.+||..+
T Consensus       173 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~  249 (276)
T 2h6d_A          173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--HVPTLFKKIR-GGVFYIPEYLNRSVATLLMHMLQVD  249 (276)
T ss_dssp             ----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             CccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHhh-cCcccCchhcCHHHHHHHHHHccCC
Confidence            567999999888776 58999999999999999999999642  2222222221 2233456678999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.++++||||+..
T Consensus       250 p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          250 PLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             GGGSCCHHHHHHSHHHHTT
T ss_pred             hhhCCCHHHHHhChhhccC
Confidence            9999999999999999753

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.71  E-value=4e-18  Score=137.68  Aligned_cols=99  Identities=22%  Similarity=0.361  Sum_probs=74.0

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc-c----------------------C
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH-K----------------------M   56 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~-~----------------------~   56 (222)
                      |..|+|||.+.+ ..|+.++|+||+||++|+|++|..||.... ........... .                      .
T Consensus       187 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (320)
T 2i6l_A          187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH-ELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMT  265 (320)
T ss_dssp             CCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTT
T ss_pred             cccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCchhhhhhhhhcCccccccccc
Confidence            567999997765 789999999999999999999999997532 22221111100 0                      0


Q ss_pred             CCC-----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         57 HPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        57 ~~~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                      .+.     .+..++..+.+|+.+||..+|.+||++.++++||||+...+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          266 EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF  314 (320)
T ss_dssp             SCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred             CCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccC
Confidence            000     12357899999999999999999999999999999986543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.71  E-value=7e-18  Score=136.95  Aligned_cols=98  Identities=29%  Similarity=0.434  Sum_probs=74.6

Q ss_pred             CcceecCccc---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH--HHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYS---VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA--ALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~---~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |..|+|||.+   ....|+.++||||+||++|+|++|..||........  ...........+..+..++..+.+|+.+|
T Consensus       179 t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  258 (322)
T 2ycf_A          179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKL  258 (322)
T ss_dssp             CCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHH
T ss_pred             CcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHH
Confidence            6789999985   467899999999999999999999999964322211  11111111111222345789999999999


Q ss_pred             cccCCCCCCChhhhhcCcccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |..+|.+||++.+++.||||...
T Consensus       259 l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          259 LVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             SCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             cccCHhhCCCHHHHhhCcCcCCH
Confidence            99999999999999999999864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.71  E-value=2.6e-18  Score=139.50  Aligned_cols=93  Identities=14%  Similarity=0.246  Sum_probs=73.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..|+.    ..............+..+...++.+.+|+.+||..+|
T Consensus       239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  314 (332)
T 3qd2_B          239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM----ERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSP  314 (332)
T ss_dssp             CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH----HHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSG
T ss_pred             CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh----HHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCC
Confidence            678999999999999999999999999999999877752    1122222222222222334567888999999999999


Q ss_pred             CCCCChhhhhcCccccc
Q psy14555         81 DKRATAGELLEDPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~   97 (222)
                      .+||++.++++||||++
T Consensus       315 ~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          315 TERPEATDIIENAIFEN  331 (332)
T ss_dssp             GGSCCHHHHHHSTTCCC
T ss_pred             CcCCCHHHHhhchhhhc
Confidence            99999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.71  E-value=7.2e-18  Score=137.77  Aligned_cols=95  Identities=27%  Similarity=0.486  Sum_probs=77.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||.+.+..++.++||||+||++|+|++|..||... ..........  ......+..++..+.+|+.+||..+|
T Consensus       204 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp  280 (335)
T 2owb_A          204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRIK--KNEYSIPKHINPVAASLIQKMLQTDP  280 (335)
T ss_dssp             CCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHH--HTCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHh--cCCCCCCccCCHHHHHHHHHHccCCh
Confidence            56799999999999999999999999999999999999643 2222222221  22334566789999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||++.+++.|+||...
T Consensus       281 ~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          281 TARPTINELLNDEFFTSG  298 (335)
T ss_dssp             GGSCCGGGGGGSHHHHTS
T ss_pred             hHCcCHHHHhcCccccCC
Confidence            999999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.70  E-value=1.3e-17  Score=137.39  Aligned_cols=97  Identities=19%  Similarity=0.332  Sum_probs=73.1

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-c---------------------c--
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-H---------------------K--   55 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~---------------------~--   55 (222)
                      |..|+|||.+.+ ..|+.++||||+||++|+|++|..||.... .......... .                     .  
T Consensus       196 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (362)
T 3pg1_A          196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST-FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSL  274 (362)
T ss_dssp             CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCC
T ss_pred             cceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhc
Confidence            567999998876 779999999999999999999999997532 2221111100 0                     0  


Q ss_pred             --CCCC----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 --MHPE----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 --~~~~----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                        ....    .+...++.+.+|+.+||..+|.+||++.++++||||+..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          275 SNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             ccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence              0000    113457889999999999999999999999999999875

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.70  E-value=8e-18  Score=135.00  Aligned_cols=98  Identities=28%  Similarity=0.479  Sum_probs=72.5

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC-------CCCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM-------HPEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li   72 (222)
                      |+.|+|||.+.+ ..|+.++|+||+||++|+|++|..||..................       .......++..+.+++
T Consensus       189 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  268 (303)
T 2vwi_A          189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMI  268 (303)
T ss_dssp             CCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHH
T ss_pred             CccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHH
Confidence            567999998765 57899999999999999999999999754332222211111110       1122346788999999


Q ss_pred             HHhcccCCCCCCChhhhhcCcccccc
Q psy14555         73 LRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||..+|.+||++.++++||||+..
T Consensus       269 ~~~l~~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          269 SLCLQKDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             HHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred             HHHccCChhhCcCHHHHhhChhhhcC
Confidence            99999999999999999999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.70  E-value=1.8e-17  Score=132.87  Aligned_cols=97  Identities=25%  Similarity=0.418  Sum_probs=75.6

Q ss_pred             CcceecCcccC------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh-hhc--cCCCCCCccccHHHHHH
Q psy14555          1 MNVIFLTQYSV------NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV-GFH--KMHPEIPAELSDKAKQF   71 (222)
Q Consensus         1 t~~y~aPe~~~------~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~l   71 (222)
                      |..|+|||.+.      ...|+.++|+||+|+++|+|++|..||...  ........ ...  ....+.+..++..+.+|
T Consensus       186 ~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  263 (298)
T 1phk_A          186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL  263 (298)
T ss_dssp             CGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTTTGGGSCHHHHHH
T ss_pred             CccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--cHHHHHHHHhcCCcccCcccccccCHHHHHH
Confidence            56899999774      567899999999999999999999999743  22222222 111  22223335689999999


Q ss_pred             HHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         72 ILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        72 i~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      +.+||..+|.+||++.++++||||++..
T Consensus       264 i~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          264 VSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             HHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            9999999999999999999999998653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.70  E-value=7.3e-18  Score=134.64  Aligned_cols=96  Identities=26%  Similarity=0.404  Sum_probs=74.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCC--CCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE--IPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+.+ .|+.++|+||+|+++|+|++|..||... .................  .+..++..+.+++.+||..
T Consensus       186 ~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  263 (287)
T 2wei_A          186 TAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTF  263 (287)
T ss_dssp             HHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCS
T ss_pred             cccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHccc
Confidence            457999998765 5999999999999999999999999753 22222222222222222  2356789999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.||||+..
T Consensus       264 dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          264 HPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             SGGGSCCHHHHHHSHHHHHH
T ss_pred             ChhhCcCHHHHhcCHHHhcc
Confidence            99999999999999999865

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.70  E-value=3.3e-18  Score=136.12  Aligned_cols=98  Identities=24%  Similarity=0.396  Sum_probs=76.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC--CCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--HPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++|..||... ..............  ....+...+..+.+|+.+||..
T Consensus       174 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  252 (283)
T 3bhy_A          174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE-TKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVK  252 (283)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCS
T ss_pred             CcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc-chHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccC
Confidence            56799999999999999999999999999999999999753 22222222211111  1112245788999999999999


Q ss_pred             CCCCCCChhhhhcCccccccc
Q psy14555         79 DPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      +|.+||++.+++.||||+...
T Consensus       253 dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          253 DPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             SGGGSCCHHHHHHCHHHHHHH
T ss_pred             CHhHCcCHHHHHhCHHHHHHH
Confidence            999999999999999998754

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.70  E-value=6.9e-18  Score=137.20  Aligned_cols=97  Identities=28%  Similarity=0.429  Sum_probs=61.8

Q ss_pred             CcceecCccc----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCC----CCccccHHHHHHH
Q psy14555          1 MNVIFLTQYS----VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPE----IPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~----~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li   72 (222)
                      |+.|+|||.+    .+..|+.++||||+||++|+|++|..||......... .........+.    .+..++..+.+|+
T Consensus       188 t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li  266 (327)
T 3aln_A          188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-LTQVVKGDPPQLSNSEEREFSPSFINFV  266 (327)
T ss_dssp             ------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCCSCCCCCCCCSSCCCCHHHHHHH
T ss_pred             CccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-HHHHhcCCCCCCCCcccccCCHHHHHHH
Confidence            5679999988    5677999999999999999999999999643221111 11111222222    2245789999999


Q ss_pred             HHhcccCCCCCCChhhhhcCcccccc
Q psy14555         73 LRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .+||..+|.+||++.++++||||...
T Consensus       267 ~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          267 NLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             HHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHhhCChhhCcCHHHHHhChHHHHh
Confidence            99999999999999999999999754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.69  E-value=1e-17  Score=135.30  Aligned_cols=92  Identities=17%  Similarity=0.175  Sum_probs=66.0

Q ss_pred             CcceecCcccCCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCC-------------ChHHHHHH-hhhccCCCCC
Q psy14555          1 MNVIFLTQYSVNS------SYSPQADIWSLGCTIVEMATGKPPFIELG-------------SPQAALYR-VGFHKMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~~------~y~~~~DiWS~Gvil~ell~g~~Pf~~~~-------------~~~~~~~~-~~~~~~~~~~   60 (222)
                      |+.|||||++.+.      .|+.++|||||||++|||++|.+||....             .....+.. .......+..
T Consensus       175 T~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~  254 (303)
T 3hmm_A          175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI  254 (303)
T ss_dssp             CGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             cccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCC
Confidence            7889999988764      47889999999999999999987653110             11122222 2233444444


Q ss_pred             Ccc-----ccHHHHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         61 PAE-----LSDKAKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        61 ~~~-----~~~~~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      |..     .+..+.+|+.+||..||.+|||+.++++.
T Consensus       255 p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            432     34578899999999999999999998764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.68  E-value=1.8e-17  Score=134.46  Aligned_cols=96  Identities=19%  Similarity=0.414  Sum_probs=73.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |.+||.....  ...............+..++..+.+|+.+||..+
T Consensus       202 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  279 (323)
T 3qup_A          202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSAD  279 (323)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             cccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCC
Confidence            457999999999999999999999999999999 9999975432  2233333334445566778999999999999999


Q ss_pred             CCCCCC-------hhhhhcCcccccc
Q psy14555         80 PDKRAT-------AGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s-------~~~~l~h~~~~~~   98 (222)
                      |.+||+       +++++.|+|+...
T Consensus       280 p~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          280 PKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             GGGSCCHHHHHHHHHHHHHC------
T ss_pred             hhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            999999       6778889998754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.68  E-value=1.1e-16  Score=129.22  Aligned_cols=92  Identities=24%  Similarity=0.452  Sum_probs=76.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||...................+..+..++..+.+++.+||..+|
T Consensus       166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  245 (307)
T 2eva_A          166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDP  245 (307)
T ss_dssp             CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSG
T ss_pred             CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCCh
Confidence            67899999999999999999999999999999999999754444433333333444555667789999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++.+
T Consensus       246 ~~Rps~~ell~~  257 (307)
T 2eva_A          246 SQRPSMEEIVKI  257 (307)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999999874

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.68  E-value=5.5e-18  Score=140.70  Aligned_cols=90  Identities=11%  Similarity=0.081  Sum_probs=71.1

Q ss_pred             cceecCcccCCC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHH
Q psy14555          2 NVIFLTQYSVNS-----------SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ   70 (222)
Q Consensus         2 ~~y~aPe~~~~~-----------~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (222)
                      +.|+|||.+.+.           .|+.++||||+||++|+|++|..||....  ......     .....+..++..+.+
T Consensus       266 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~--~~~~~~-----~~~~~~~~~~~~~~~  338 (377)
T 3byv_A          266 RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDA--ALGGSE-----WIFRSCKNIPQPVRA  338 (377)
T ss_dssp             TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC--------CCSG-----GGGSSCCCCCHHHHH
T ss_pred             cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccc--cccchh-----hhhhhccCCCHHHHH
Confidence            479999998887           89999999999999999999999996321  111111     111223567899999


Q ss_pred             HHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         71 FILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        71 li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      |+.+||..+|.+||++.++++||||+..
T Consensus       339 li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          339 LLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             HHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             HHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            9999999999999999999999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.68  E-value=6.2e-17  Score=130.91  Aligned_cols=95  Identities=23%  Similarity=0.448  Sum_probs=78.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..++.++||||+||++|+|++|..||... ..................+..++..+.+|+.+||..+|
T Consensus       202 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  280 (309)
T 3p86_A          202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEP  280 (309)
T ss_dssp             CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS-CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCCh
Confidence            67899999999999999999999999999999999999753 33333333333455566778899999999999999999


Q ss_pred             CCCCChhhhhc--Ccccc
Q psy14555         81 DKRATAGELLE--DPFLA   96 (222)
Q Consensus        81 ~~R~s~~~~l~--h~~~~   96 (222)
                      .+||++.++++  ..+++
T Consensus       281 ~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          281 WKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             GGSCCHHHHHHHHHHHHC
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            99999999987  34544

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.67  E-value=2.2e-17  Score=134.07  Aligned_cols=89  Identities=24%  Similarity=0.457  Sum_probs=73.0

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..+ +.++||||+||++|+|++|..||..   .. ....     .....+..++..+.+|+.+||..+
T Consensus       211 t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~---~~-~~~~-----~~~~~~~~~~~~~~~li~~~l~~d  281 (320)
T 3a99_A          211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---DE-EIIR-----GQVFFRQRVSSECQHLIRWCLALR  281 (320)
T ss_dssp             CGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS---HH-HHHH-----CCCCCSSCCCHHHHHHHHHHTCSS
T ss_pred             CccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC---hh-hhhc-----ccccccccCCHHHHHHHHHHccCC
Confidence            678999998877666 6889999999999999999999952   21 1111     122345568999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.++++||||+..
T Consensus       282 p~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          282 PSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             GGGSCCHHHHHTSGGGSSC
T ss_pred             hhhCcCHHHHhcCHhhcCc
Confidence            9999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.67  E-value=2.5e-17  Score=136.34  Aligned_cols=94  Identities=14%  Similarity=0.274  Sum_probs=78.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |.+||...  .................+..++..+.+|+.+||..+
T Consensus       249 t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~d  326 (367)
T 3l9p_A          249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQ  326 (367)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCC
Confidence            567999999999999999999999999999998 99999743  334444444444455566778999999999999999


Q ss_pred             CCCCCChhhhhcCcccc
Q psy14555         80 PDKRATAGELLEDPFLA   96 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~   96 (222)
                      |.+||++.+++++.++.
T Consensus       327 P~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          327 PEDRPNFAIILERIEYC  343 (367)
T ss_dssp             GGGSCCHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHH
Confidence            99999999999997654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.66  E-value=5.6e-17  Score=128.23  Aligned_cols=91  Identities=24%  Similarity=0.475  Sum_probs=75.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++|..||... ..................+..++..+.+++.+||..+|
T Consensus       177 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  255 (271)
T 3dtc_A          177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI-DGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDP  255 (271)
T ss_dssp             CGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS-CHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             ccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCc
Confidence            67899999999999999999999999999999999999753 23333333334445556677889999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.+++++
T Consensus       256 ~~Rps~~e~l~~  267 (271)
T 3dtc_A          256 HSRPSFTNILDQ  267 (271)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             ccCcCHHHHHHH
Confidence            999999999865

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.66  E-value=8.5e-17  Score=126.90  Aligned_cols=90  Identities=22%  Similarity=0.420  Sum_probs=73.5

Q ss_pred             CcceecCcccCCCCCCc---hhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYSP---QADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~---~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+.+..++.   ++||||+||++|+|++|..||... ...............+..+..++..+.+++.+||.
T Consensus       171 t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  249 (271)
T 3kmu_A          171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL-SNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMN  249 (271)
T ss_dssp             CGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS-CHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc-ChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            67899999988766655   799999999999999999999753 23333333444555666778899999999999999


Q ss_pred             cCCCCCCChhhhhc
Q psy14555         78 KDPDKRATAGELLE   91 (222)
Q Consensus        78 ~~p~~R~s~~~~l~   91 (222)
                      .+|.+||++.++++
T Consensus       250 ~~p~~Rps~~~il~  263 (271)
T 3kmu_A          250 EDPAKRPKFDMIVP  263 (271)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.65  E-value=4e-17  Score=131.92  Aligned_cols=97  Identities=23%  Similarity=0.396  Sum_probs=76.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC--CCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||... ...............+  ..+..++.++.+++.+||..
T Consensus       182 t~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  260 (311)
T 3ork_A          182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-SPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK  260 (311)
T ss_dssp             CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCS
T ss_pred             CcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhc
Confidence            67899999999999999999999999999999999999753 2222222222222111  11245789999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +|.+||++.+++.|+|++..
T Consensus       261 dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          261 NPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             SGGGSCSSHHHHHHHHHHHH
T ss_pred             CHhhChhhHHHHHHHHHHHh
Confidence            99999999999999998754

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.65  E-value=1.1e-16  Score=129.30  Aligned_cols=89  Identities=27%  Similarity=0.507  Sum_probs=72.5

Q ss_pred             CcceecCcccCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYS-PQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~-~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..+. .++||||+||++|+|++|+.||..   .. ....     .....+..++..+.+++.+||..+
T Consensus       201 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~---~~-~~~~-----~~~~~~~~~~~~~~~li~~~l~~~  271 (312)
T 2iwi_A          201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER---DQ-EILE-----AELHFPAHVSPDCCALIRRCLAPK  271 (312)
T ss_dssp             CTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS---HH-HHHH-----TCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC---hH-HHhh-----hccCCcccCCHHHHHHHHHHccCC
Confidence            5689999988777665 589999999999999999999952   22 2111     223345678999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+||++.+++.||||+..
T Consensus       272 p~~Rps~~e~l~~~~~~~~  290 (312)
T 2iwi_A          272 PSSRPSLEEILLDPWMQTP  290 (312)
T ss_dssp             TTTSCCHHHHHHSTTTCC-
T ss_pred             hhhCcCHHHHhcChhhcCc
Confidence            9999999999999999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.65  E-value=5.6e-17  Score=134.42  Aligned_cols=90  Identities=22%  Similarity=0.414  Sum_probs=74.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++ |..||.+..  ................|..++..+.+++.+||..+
T Consensus       268 t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  345 (370)
T 2psq_A          268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV  345 (370)
T ss_dssp             CGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             ccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 999997532  23333333444455667788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       346 P~~Rpt~~ell~~  358 (370)
T 2psq_A          346 PSQRPTFKQLVED  358 (370)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.65  E-value=8.8e-17  Score=130.23  Aligned_cols=90  Identities=18%  Similarity=0.349  Sum_probs=73.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||...  .................+..++..+.+++.+||..+
T Consensus       203 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  280 (322)
T 1p4o_A          203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYN  280 (322)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC--CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 89999743  333333333334444556778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.|
T Consensus       281 p~~Rps~~e~l~~  293 (322)
T 1p4o_A          281 PKMRPSFLEIISS  293 (322)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999876

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.65  E-value=4.8e-17  Score=133.69  Aligned_cols=91  Identities=22%  Similarity=0.368  Sum_probs=75.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||...... ...............+..+++.+.+++.+||..+
T Consensus       258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  336 (359)
T 3vhe_A          258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE  336 (359)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            567999999999999999999999999999998 99999764333 2333333344455667778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.|
T Consensus       337 P~~Rps~~ell~~  349 (359)
T 3vhe_A          337 PSQRPTFSELVEH  349 (359)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCCCHHHHHHH
Confidence            9999999999886

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.64  E-value=1e-16  Score=126.77  Aligned_cols=90  Identities=21%  Similarity=0.309  Sum_probs=74.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++ |.+||...  .................+...+..+.+++.+||..+
T Consensus       170 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  247 (269)
T 4hcu_A          170 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRER  247 (269)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             ccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC--CHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCC
Confidence            456999999998999999999999999999999 99999743  333333333444455566778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.++++|
T Consensus       248 p~~Rps~~~ll~~  260 (269)
T 4hcu_A          248 PEDRPAFSRLLRQ  260 (269)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999876

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.64  E-value=6.3e-17  Score=131.73  Aligned_cols=90  Identities=20%  Similarity=0.334  Sum_probs=74.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++ |..||.....  ...............+...+..+.+++.+||..+
T Consensus       182 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  259 (327)
T 3poz_A          182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQPPICTIDVYMIMVKCWMID  259 (327)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSC
T ss_pred             cccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 9999975332  2233333344445566778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       260 p~~Rps~~ell~~  272 (327)
T 3poz_A          260 ADSRPKFRELIIE  272 (327)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCCCHHHHHHH
Confidence            9999999999876

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.64  E-value=1.2e-16  Score=127.94  Aligned_cols=94  Identities=23%  Similarity=0.357  Sum_probs=70.1

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh---hhccCCCCCCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l   76 (222)
                      |..|+|||.+.+. .|+.++|+||+||++|+|++   ||.. ..........   .....+...+...+..+.+++.+||
T Consensus       193 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  268 (303)
T 1zy4_A          193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST-GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLI  268 (303)
T ss_dssp             -CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS-HHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHT
T ss_pred             cccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC-chhHHHHHHhccccccccCccccccchHHHHHHHHHHH
Confidence            4679999988754 79999999999999999998   5532 1111222221   1122334445667888999999999


Q ss_pred             ccCCCCCCChhhhhcCcccccc
Q psy14555         77 EKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        77 ~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..+|.+||++.++++||||+..
T Consensus       269 ~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          269 DHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             CSSGGGSCCHHHHHHSSCSCCC
T ss_pred             hcCcccCcCHHHHhCCCCcCCC
Confidence            9999999999999999999753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.64  E-value=7.8e-17  Score=131.04  Aligned_cols=94  Identities=14%  Similarity=0.274  Sum_probs=77.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||...  .................+..++..+.+++.+||..+
T Consensus       208 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  285 (327)
T 2yfx_A          208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQ  285 (327)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCC
Confidence            457999999989999999999999999999998 99999743  333333333344445556778999999999999999


Q ss_pred             CCCCCChhhhhcCcccc
Q psy14555         80 PDKRATAGELLEDPFLA   96 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~   96 (222)
                      |.+||++.+++.|.|+.
T Consensus       286 p~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          286 PEDRPNFAIILERIEYC  302 (327)
T ss_dssp             GGGSCCHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHH
Confidence            99999999999998764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.64  E-value=3.1e-16  Score=125.03  Aligned_cols=91  Identities=21%  Similarity=0.365  Sum_probs=73.9

Q ss_pred             CcceecCccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH-HHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYS--VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA-LYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~--~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+  ....|+.++||||+||++|+|++|..||......... ..........+..+..+++.+.+++.+||.
T Consensus       189 ~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  268 (287)
T 4f0f_A          189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWS  268 (287)
T ss_dssp             CCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhc
Confidence            6789999988  4556889999999999999999999999764443332 222334455566777889999999999999


Q ss_pred             cCCCCCCChhhhhc
Q psy14555         78 KDPDKRATAGELLE   91 (222)
Q Consensus        78 ~~p~~R~s~~~~l~   91 (222)
                      .+|.+||++.++++
T Consensus       269 ~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          269 GDPKKRPHFSYIVK  282 (287)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=7.3e-17  Score=128.83  Aligned_cols=92  Identities=15%  Similarity=0.223  Sum_probs=75.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++ |..||.....  ............+..+..++..+.+++.+||..+
T Consensus       176 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~  253 (287)
T 1u59_A          176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQGKRMECPPECPPELYALMSDCWIYK  253 (287)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             cccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCC
Confidence            467999999988899999999999999999998 9999975433  2232333334445667788999999999999999


Q ss_pred             CCCCCChhhhhcCcc
Q psy14555         80 PDKRATAGELLEDPF   94 (222)
Q Consensus        80 p~~R~s~~~~l~h~~   94 (222)
                      |.+||++.+++.+.+
T Consensus       254 p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          254 WEDRPDFLTVEQRMR  268 (287)
T ss_dssp             GGGSCCHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHH
Confidence            999999999998753

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.63  E-value=3.3e-17  Score=137.71  Aligned_cols=90  Identities=11%  Similarity=0.071  Sum_probs=71.9

Q ss_pred             cceecCccc----------CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHH
Q psy14555          2 NVIFLTQYS----------VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF   71 (222)
Q Consensus         2 ~~y~aPe~~----------~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   71 (222)
                      +.|+|||.+          ....|+.++||||+||++|+|++|+.||.....  ......     .......++..+.+|
T Consensus       271 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~--~~~~~~-----~~~~~~~~~~~~~~l  343 (413)
T 3dzo_A          271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA--LGGSEW-----IFRSCKNIPQPVRAL  343 (413)
T ss_dssp             TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG--GSCSGG-----GGSSCCCCCHHHHHH
T ss_pred             CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch--hhhHHH-----HHhhcccCCHHHHHH
Confidence            479999988          677799999999999999999999999964211  111111     111223578999999


Q ss_pred             HHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         72 ILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        72 i~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      +.+||..+|.+||++.+++.||||+..
T Consensus       344 i~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          344 LEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             HHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            999999999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.1e-16  Score=130.98  Aligned_cols=92  Identities=17%  Similarity=0.287  Sum_probs=75.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||...... ...............+..++..+.+|+.+||..+
T Consensus       237 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  315 (344)
T 1rjb_A          237 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFD  315 (344)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            457999999989999999999999999999998 99999764332 3333333444555667778999999999999999


Q ss_pred             CCCCCChhhhhcCc
Q psy14555         80 PDKRATAGELLEDP   93 (222)
Q Consensus        80 p~~R~s~~~~l~h~   93 (222)
                      |.+||++.+++.|.
T Consensus       316 p~~Rps~~~l~~~l  329 (344)
T 1rjb_A          316 SRKRPSFPNLTSFL  329 (344)
T ss_dssp             GGGSCCHHHHHHHH
T ss_pred             chhCcCHHHHHHHH
Confidence            99999999998874

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.62  E-value=1.4e-16  Score=128.48  Aligned_cols=91  Identities=22%  Similarity=0.375  Sum_probs=74.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||....... ..............+..++..+.+++.+||..+
T Consensus       213 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  291 (316)
T 2xir_A          213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE  291 (316)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH-HHHHHhccCccCCCCCCCCHHHHHHHHHHcCCC
Confidence            467999999999999999999999999999998 999997543332 232333334445556678999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.|
T Consensus       292 p~~Rps~~ell~~  304 (316)
T 2xir_A          292 PSQRPTFSELVEH  304 (316)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999886

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.62  E-value=1.8e-16  Score=129.07  Aligned_cols=90  Identities=17%  Similarity=0.317  Sum_probs=74.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++ |..||...  ...............+.+..++..+.+|+.+||..+
T Consensus       217 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  294 (325)
T 3kul_A          217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKD  294 (325)
T ss_dssp             CGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCC
Confidence            456999999998999999999999999999999 99999753  333343333444555667788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++..
T Consensus       295 p~~Rps~~eil~~  307 (325)
T 3kul_A          295 RAQRPRFSQIVSV  307 (325)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998763

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.62  E-value=1.6e-16  Score=129.40  Aligned_cols=90  Identities=20%  Similarity=0.319  Sum_probs=74.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++ |.+||.....  ...............+..++..+.+++.+||..+
T Consensus       182 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  259 (327)
T 3lzb_A          182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQPPICTIDVYMIMRKCWMID  259 (327)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred             cccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 9999975332  2333333344455567778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++..
T Consensus       260 p~~Rps~~ell~~  272 (327)
T 3lzb_A          260 ADSRPKFRELIIE  272 (327)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999874

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.62  E-value=1.5e-16  Score=125.64  Aligned_cols=90  Identities=22%  Similarity=0.291  Sum_probs=73.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++ |..||...  .................+...+..+.+++.+||..+
T Consensus       168 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  245 (268)
T 3sxs_A          168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--TNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHEL  245 (268)
T ss_dssp             CGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSS
T ss_pred             CcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc--ChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCC
Confidence            456999999998899999999999999999999 99999743  223333333344445556678999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++++
T Consensus       246 p~~Rps~~~ll~~  258 (268)
T 3sxs_A          246 PEKRPTFQQLLSS  258 (268)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999876

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.62  E-value=1.4e-16  Score=126.84  Aligned_cols=90  Identities=16%  Similarity=0.282  Sum_probs=72.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++ |.+||......  ..............+..++..+.+++.+||..+
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~  257 (281)
T 1mp8_A          180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD  257 (281)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            457999999998999999999999999999996 99999754322  222222333445566788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       258 p~~Rps~~~l~~~  270 (281)
T 1mp8_A          258 PSRRPRFTELKAQ  270 (281)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.62  E-value=2.5e-16  Score=130.98  Aligned_cols=90  Identities=22%  Similarity=0.438  Sum_probs=76.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||...  .................+..++..+.+|+.+||..+
T Consensus       256 t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  333 (382)
T 3tt0_A          256 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV  333 (382)
T ss_dssp             GGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSS
T ss_pred             CcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 99999743  334444444455556667788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++++
T Consensus       334 P~~Rps~~ell~~  346 (382)
T 3tt0_A          334 PSQRPTFKQLVED  346 (382)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999886

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.62  E-value=2.5e-16  Score=125.27  Aligned_cols=90  Identities=21%  Similarity=0.327  Sum_probs=74.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++ |..||...  .................+...+..+.+++.+||..+
T Consensus       184 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  261 (283)
T 3gen_A          184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK  261 (283)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             CcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--ChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCC
Confidence            456999999998999999999999999999998 99999753  233333333344455566778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.|
T Consensus       262 p~~Rps~~~ll~~  274 (283)
T 3gen_A          262 ADERPTFKILLSN  274 (283)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999876

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.62  E-value=1.6e-16  Score=126.44  Aligned_cols=90  Identities=19%  Similarity=0.280  Sum_probs=72.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++ |..||.......  .............+..+++.+.+++.+||..+
T Consensus       177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  254 (281)
T 3cc6_A          177 PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYD  254 (281)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            457999999988999999999999999999998 999996433222  22222223344456678999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       255 p~~Rps~~ell~~  267 (281)
T 3cc6_A          255 PSDRPRFTELVCS  267 (281)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             chhCcCHHHHHHH
Confidence            9999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.62  E-value=2.9e-16  Score=123.70  Aligned_cols=90  Identities=21%  Similarity=0.309  Sum_probs=73.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+|+++|+|++ |.+||...  .................+...+..+.+++.+||..+
T Consensus       168 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~  245 (267)
T 3t9t_A          168 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRER  245 (267)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC--CHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCC
Confidence            457999999998999999999999999999999 89999743  233333333334445556678999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       246 p~~Rps~~~ll~~  258 (267)
T 3t9t_A          246 PEDRPAFSRLLRQ  258 (267)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.61  E-value=3e-16  Score=128.08  Aligned_cols=90  Identities=13%  Similarity=0.233  Sum_probs=74.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++ |..||...  .................+..++..+.+++.+||..+
T Consensus       239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  316 (343)
T 1luf_A          239 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM--AHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKL  316 (343)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC--ChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccC
Confidence            467999999998999999999999999999999 99999743  333333333344445567788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       317 p~~Rps~~~~~~~  329 (343)
T 1luf_A          317 PADRPSFCSIHRI  329 (343)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             cccCCCHHHHHHH
Confidence            9999999999764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.61  E-value=1.3e-16  Score=128.58  Aligned_cols=90  Identities=23%  Similarity=0.476  Sum_probs=74.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||.....  ...............+..++..+.+++.+||..+
T Consensus       215 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  292 (314)
T 2ivs_A          215 PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQE  292 (314)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCC
Confidence            456999999999999999999999999999999 9999975332  2333333344455566788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       293 p~~Rps~~~l~~~  305 (314)
T 2ivs_A          293 PDKRPVFADISKD  305 (314)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.61  E-value=3.2e-16  Score=125.28  Aligned_cols=89  Identities=15%  Similarity=0.239  Sum_probs=73.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++ |..||...  ..............+..+..++..+.+++.+||..+
T Consensus       183 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  260 (291)
T 1xbb_A          183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD  260 (291)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            456999999988899999999999999999999 99999753  333333333344455667788999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       261 p~~Rps~~~l~~  272 (291)
T 1xbb_A          261 VENRPGFAAVEL  272 (291)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999876

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.61  E-value=3.3e-16  Score=133.13  Aligned_cols=89  Identities=18%  Similarity=0.363  Sum_probs=73.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+..+.|+.++||||+||++|||++ |..||.+..  ..............+.|..++..+.+|+.+||..+
T Consensus       348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~d  425 (454)
T 1qcf_A          348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNR  425 (454)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            457999999998999999999999999999999 999997542  33333333344555667788999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       426 p~~RPt~~~i~~  437 (454)
T 1qcf_A          426 PEERPTFEYIQS  437 (454)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.61  E-value=2.6e-16  Score=127.97  Aligned_cols=90  Identities=21%  Similarity=0.396  Sum_probs=74.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||...  .................+..++..+.+|+.+||..+
T Consensus       204 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  281 (327)
T 1fvr_A          204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK  281 (327)
T ss_dssp             CTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred             CccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC--cHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            457999999988899999999999999999998 99999743  333343443444455566788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       282 p~~Rps~~ell~~  294 (327)
T 1fvr_A          282 PYERPSFAQILVS  294 (327)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999886

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=5.9e-16  Score=126.35  Aligned_cols=90  Identities=16%  Similarity=0.359  Sum_probs=73.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++ |..||...  ...............+.+..++..+.+++.+||..+
T Consensus       213 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  290 (333)
T 1mqb_A          213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQE  290 (333)
T ss_dssp             CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSS
T ss_pred             cccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999998 99999753  223333333334445556778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       291 p~~Rps~~~l~~~  303 (333)
T 1mqb_A          291 RARRPKFADIVSI  303 (333)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.61  E-value=1.3e-16  Score=129.74  Aligned_cols=90  Identities=21%  Similarity=0.285  Sum_probs=73.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.++.|+.++||||+||++|+|++ |..||......  ..............+..++..+.+++.+||..+
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  257 (325)
T 3kex_A          180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERLAQPQICTIDVYMVMVKCWMID  257 (325)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSC
T ss_pred             cccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 99999754332  222222333444556678889999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       258 p~~Rps~~el~~~  270 (325)
T 3kex_A          258 ENIRPTFKELANE  270 (325)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999886

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.61  E-value=1.9e-16  Score=131.46  Aligned_cols=88  Identities=17%  Similarity=0.303  Sum_probs=72.8

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      ..|+|||.+.++.|+.++||||+||++|||++ |..||....  ..............+.|..++..+.+|+.+||..+|
T Consensus       279 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  356 (377)
T 3cbl_A          279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--NQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEP  356 (377)
T ss_dssp             GGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             cCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCc
Confidence            45999999998999999999999999999998 999997542  333333334444556677789999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       357 ~~Rps~~~i~~  367 (377)
T 3cbl_A          357 GQRPSFSTIYQ  367 (377)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.61  E-value=2.5e-16  Score=126.86  Aligned_cols=91  Identities=19%  Similarity=0.356  Sum_probs=73.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||...... ...............+..++..+.+++.+||..+
T Consensus       210 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  288 (313)
T 1t46_A          210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD  288 (313)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch-hHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999998 99999754332 2222332333444556678999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       289 p~~Rps~~ell~~  301 (313)
T 1t46_A          289 PLKRPTFKQIVQL  301 (313)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             chhCcCHHHHHHH
Confidence            9999999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.61  E-value=1.1e-16  Score=128.01  Aligned_cols=91  Identities=12%  Similarity=0.102  Sum_probs=68.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ-----AALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.......     ..................++..+.+++.+|
T Consensus       178 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  257 (296)
T 4hgt_A          178 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFC  257 (296)
T ss_dssp             CGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred             CccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHH
Confidence            678999999999999999999999999999999999997532211     111111111111112245689999999999


Q ss_pred             cccCCCCCCChhhhhc
Q psy14555         76 FEKDPDKRATAGELLE   91 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~   91 (222)
                      |..+|.+||++.++++
T Consensus       258 l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          258 RSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HTSCTTCCCCHHHHHH
T ss_pred             HhcCCCCCCCHHHHHH
Confidence            9999999999999876

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.61  E-value=3.6e-16  Score=125.02  Aligned_cols=91  Identities=12%  Similarity=0.096  Sum_probs=69.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHhhhccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-----QAALYRVGFHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|+.||......     ...+............+..++..+.+++.+|
T Consensus       178 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  257 (296)
T 3uzp_A          178 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFC  257 (296)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred             ccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999999753221     1111111111111112345789999999999


Q ss_pred             cccCCCCCCChhhhhc
Q psy14555         76 FEKDPDKRATAGELLE   91 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~   91 (222)
                      |..+|.+||++.+++.
T Consensus       258 l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          258 RSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HTSCTTCCCCHHHHHH
T ss_pred             HhcCcCcCCCHHHHHH
Confidence            9999999999999876

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.60  E-value=3.4e-16  Score=126.38  Aligned_cols=90  Identities=22%  Similarity=0.420  Sum_probs=73.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++ |.+||.....  ...............+..++..+.+++.+||..+
T Consensus       212 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  289 (313)
T 3brb_A          212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTD  289 (313)
T ss_dssp             CGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSS
T ss_pred             CccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 9999975332  2222333334455566778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       290 p~~Rps~~~l~~~  302 (313)
T 3brb_A          290 PLDRPTFSVLRLQ  302 (313)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.60  E-value=4e-16  Score=132.48  Aligned_cols=89  Identities=17%  Similarity=0.254  Sum_probs=73.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|||++ |..||......  ........+.....|..+++.+.++|.+||..+
T Consensus       349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~d  426 (450)
T 1k9a_A          349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLD  426 (450)
T ss_dssp             CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCC
Confidence            467999999999999999999999999999998 99999754332  222223344555667788999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       427 p~~Rpt~~~l~~  438 (450)
T 1k9a_A          427 AATRPTFLQLRE  438 (450)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.60  E-value=3.6e-16  Score=137.74  Aligned_cols=96  Identities=15%  Similarity=0.182  Sum_probs=70.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHH---------HHhh-h------------ccCCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL---------YRVG-F------------HKMHP   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~---------~~~~-~------------~~~~~   58 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|..||... ......         .... .            ...+.
T Consensus       186 t~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~  264 (676)
T 3qa8_A          186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN-WQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPN  264 (676)
T ss_dssp             CCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS-CHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSC
T ss_pred             CcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc-cchhhhhhhhhcccchhhhhhhhhccccccccccCCch
Confidence            57899999999999999999999999999999999999642 111110         0000 0            00011


Q ss_pred             CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         59 EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        59 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      ..+..++..+.+|+.+||..||.+||++.+++.||||..
T Consensus       265 ~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          265 HLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            223457889999999999999999999999999999975

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.60  E-value=1.2e-15  Score=121.95  Aligned_cols=91  Identities=19%  Similarity=0.410  Sum_probs=69.9

Q ss_pred             CcceecCcccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC---CCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSV---NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---PEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~---~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~   74 (222)
                      |+.|+|||.+.   +..|+.++||||+||++|+|++|..||...................   ...+..++..+.+|+.+
T Consensus       185 t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  264 (289)
T 3og7_A          185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE  264 (289)
T ss_dssp             CCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHH
T ss_pred             CccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHH
Confidence            67899999886   6678999999999999999999999997644433332222222222   22345678999999999


Q ss_pred             hcccCCCCCCChhhhhc
Q psy14555         75 CFEKDPDKRATAGELLE   91 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~   91 (222)
                      ||..+|.+||++.+++.
T Consensus       265 ~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          265 CLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HccCChhhCCCHHHHHH
Confidence            99999999999999876

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.60  E-value=4.4e-16  Score=124.64  Aligned_cols=92  Identities=14%  Similarity=0.120  Sum_probs=70.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhhh---ccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVGF---HKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||......  .........   ..........++..+.+++.+|
T Consensus       181 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  260 (298)
T 1csn_A          181 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYA  260 (298)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred             CcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHH
Confidence            57899999999999999999999999999999999999753321  121111111   1111122346789999999999


Q ss_pred             cccCCCCCCChhhhhcC
Q psy14555         76 FEKDPDKRATAGELLED   92 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h   92 (222)
                      |..+|.+||++.+++..
T Consensus       261 l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          261 RNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHCCTTCCCCHHHHHHH
T ss_pred             hcCCcccCCCHHHHHHH
Confidence            99999999999998763

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.60  E-value=3.2e-16  Score=127.57  Aligned_cols=91  Identities=18%  Similarity=0.305  Sum_probs=73.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |.+||...... ...............+...+..+.+++.+||..+
T Consensus       229 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  307 (333)
T 2i1m_A          229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE  307 (333)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccC
Confidence            457999999989999999999999999999998 99999754332 2222333334444556677999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       308 p~~Rps~~~l~~~  320 (333)
T 2i1m_A          308 PTHRPTFQQICSF  320 (333)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.60  E-value=6.3e-16  Score=131.33  Aligned_cols=89  Identities=18%  Similarity=0.376  Sum_probs=74.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.++.|+.++||||+||++|||++ |..||.+.  ...............+.|..++..+.+++.+||..+
T Consensus       344 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~d  421 (452)
T 1fmk_A          344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKE  421 (452)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            457999999999999999999999999999999 99999753  233333333444555667788999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       422 P~~Rpt~~~l~~  433 (452)
T 1fmk_A          422 PEERPTFEYLQA  433 (452)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999876

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.59  E-value=4.2e-16  Score=124.31  Aligned_cols=91  Identities=21%  Similarity=0.356  Sum_probs=73.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+|+++|+|++ |..||... ..................+..++..+.+++.+||..+
T Consensus       187 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  265 (291)
T 1u46_A          187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHK  265 (291)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-CHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCC
Confidence            456999999988899999999999999999999 99999753 2233333333334445556778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       266 p~~Rps~~~l~~~  278 (291)
T 1u46_A          266 PEDRPTFVALRDF  278 (291)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999873

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.59  E-value=5e-16  Score=123.30  Aligned_cols=89  Identities=16%  Similarity=0.248  Sum_probs=72.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++ |..||.....  ...............+..+++.+.+++.+||..+
T Consensus       177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  254 (278)
T 1byg_A          177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLD  254 (278)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCC
Confidence            467999999988999999999999999999998 9999975322  2222222334445566778999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       255 p~~Rps~~~l~~  266 (278)
T 1byg_A          255 AAMRPSFLQLRE  266 (278)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCCCHHHHHH
Confidence            999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.59  E-value=4e-16  Score=127.22  Aligned_cols=90  Identities=23%  Similarity=0.448  Sum_probs=74.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |..||...  .................+..++..+.+++.+||..+
T Consensus       222 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  299 (334)
T 2pvf_A          222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV  299 (334)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCC
Confidence            456999999988999999999999999999999 99999743  333333333334445566778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       300 p~~Rps~~ell~~  312 (334)
T 2pvf_A          300 PSQRPTFKQLVED  312 (334)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.59  E-value=5.5e-16  Score=125.56  Aligned_cols=94  Identities=19%  Similarity=0.322  Sum_probs=70.0

Q ss_pred             CcceecCcccC--------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHhhhccC-------------
Q psy14555          1 MNVIFLTQYSV--------NSSYSPQADIWSLGCTIVEMATGKPPFIELGSP---QAALYRVGFHKM-------------   56 (222)
Q Consensus         1 t~~y~aPe~~~--------~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~---~~~~~~~~~~~~-------------   56 (222)
                      |..|+|||.+.        +..|+.++||||+||++|+|++|..||......   ...+........             
T Consensus       178 t~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  257 (319)
T 4euu_A          178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG  257 (319)
T ss_dssp             CGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTC
T ss_pred             CCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCC
Confidence            67899999875        678999999999999999999999999643221   122222211110             


Q ss_pred             ----------CCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcc
Q psy14555         57 ----------HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPF   94 (222)
Q Consensus        57 ----------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~   94 (222)
                                ....+..++..+.+|+.+||..||.+||++.++++||-
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          258 PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             CEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             ccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence                      01223456778899999999999999999999999873

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.59  E-value=2.9e-16  Score=128.76  Aligned_cols=92  Identities=14%  Similarity=0.107  Sum_probs=68.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh--hhccCCCC------CCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPE------IPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~~li   72 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.............  ......+.      ....++..+.+++
T Consensus       223 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  302 (345)
T 2v62_A          223 TIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFL  302 (345)
T ss_dssp             CTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHH
T ss_pred             CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHH
Confidence            678999999999999999999999999999999999995322222221111  11111110      0116788999999


Q ss_pred             HHhcccCCCCCCChhhhhcC
Q psy14555         73 LRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h   92 (222)
                      .+||..+|.+||++.+++..
T Consensus       303 ~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          303 VCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             HHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHhhcCcccCCCHHHHHHH
Confidence            99999999999999998763

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.59  E-value=6.2e-16  Score=123.25  Aligned_cols=90  Identities=19%  Similarity=0.380  Sum_probs=73.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+|+++|+|++ |.+||.....  ...............+..++..+.+|+.+||..+
T Consensus       175 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  252 (288)
T 3kfa_A          175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKVYELMRACWQWN  252 (288)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCC
Confidence            457999999999999999999999999999999 9999975332  2222333334455566788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.++++.
T Consensus       253 p~~Rps~~~~~~~  265 (288)
T 3kfa_A          253 PSDRPSFAEIHQA  265 (288)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999763

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.59  E-value=6.5e-16  Score=128.15  Aligned_cols=89  Identities=17%  Similarity=0.349  Sum_probs=71.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++||||+||++|||++ |..||...  ...............+.+..++..+.+++.+||..+
T Consensus       213 ~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~d  290 (373)
T 2qol_A          213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD  290 (373)
T ss_dssp             -CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--CHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSS
T ss_pred             CCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcC
Confidence            356999999999999999999999999999998 99999753  233333333333344456678999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       291 p~~RPs~~~i~~  302 (373)
T 2qol_A          291 RNNRPKFEQIVS  302 (373)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999876

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.59  E-value=1.3e-15  Score=122.71  Aligned_cols=92  Identities=24%  Similarity=0.377  Sum_probs=70.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|..||.............. ....+...+..++..+.+++.+||..+
T Consensus       199 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  278 (310)
T 2wqm_A          199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPD  278 (310)
T ss_dssp             CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSS
T ss_pred             CeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCC
Confidence            5679999999999999999999999999999999999964332222222222 222223333568999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       279 p~~Rps~~~il~~  291 (310)
T 2wqm_A          279 PEKRPDVTYVYDV  291 (310)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCCCHHHHHHH
Confidence            9999999999864

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.58  E-value=1.3e-15  Score=134.52  Aligned_cols=89  Identities=15%  Similarity=0.239  Sum_probs=75.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||++.+..|+.++||||+||++|||++ |..||.+.  ....+............|..++.++.+||.+||..+
T Consensus       535 t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~d  612 (635)
T 4fl3_A          535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD  612 (635)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            456999999999999999999999999999998 99999753  333444444455566677889999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       613 P~~RPs~~~l~~  624 (635)
T 4fl3_A          613 VENRPGFAAVEL  624 (635)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.58  E-value=1e-15  Score=134.64  Aligned_cols=89  Identities=17%  Similarity=0.280  Sum_probs=74.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||++.++.|+.++||||+||++|||++ |..||......  .+............|..++..+.++|.+||..+
T Consensus       502 ~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~d  579 (613)
T 2ozo_A          502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRMECPPECPPELYALMSDCWIYK  579 (613)
T ss_dssp             CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             ccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999998 99999864432  333333444555667788999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       580 P~~RPs~~~l~~  591 (613)
T 2ozo_A          580 WEDRPDFLTVEQ  591 (613)
T ss_dssp             TTTSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999854

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.58  E-value=8.6e-16  Score=121.94  Aligned_cols=89  Identities=17%  Similarity=0.304  Sum_probs=72.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++ |..||...  .................+..++..+.+++.+||..+
T Consensus       173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  250 (279)
T 1qpc_A          173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER  250 (279)
T ss_dssp             CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc--CHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccC
Confidence            457999999988899999999999999999999 99999753  223333333344445556778999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       251 p~~Rps~~~l~~  262 (279)
T 1qpc_A          251 PEDRPTFDYLRS  262 (279)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCCCHHHHHH
Confidence            999999999876

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.58  E-value=4.1e-16  Score=129.37  Aligned_cols=90  Identities=18%  Similarity=0.362  Sum_probs=71.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++ |.+||.........  ...........|..++..+.+++.+||..+
T Consensus       259 ~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~--~~~~~~~~~~~p~~~~~~l~~li~~cl~~d  336 (373)
T 3c1x_A          259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--VYLLQGRRLLQPEYCPDPLYEVMLKCWHPK  336 (373)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH--HHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH--HHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            456999999999999999999999999999999 78888654332221  222233344556678999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.+
T Consensus       337 p~~RPs~~ell~~  349 (373)
T 3c1x_A          337 AEMRPSFSELVSR  349 (373)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.58  E-value=3.9e-16  Score=126.13  Aligned_cols=92  Identities=18%  Similarity=0.231  Sum_probs=67.9

Q ss_pred             CcceecCcccCCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSS---YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~---y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+.+..   |+.++||||+||++|+|++|..||....................+.+..++..+.+++.+||.
T Consensus       206 t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  285 (317)
T 2buj_A          206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMT  285 (317)
T ss_dssp             CGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTC
T ss_pred             CcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhh
Confidence            56799999887654   789999999999999999999999421000001111112223333445679999999999999


Q ss_pred             cCCCCCCChhhhhcC
Q psy14555         78 KDPDKRATAGELLED   92 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h   92 (222)
                      .+|.+||++.+++.+
T Consensus       286 ~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          286 VDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             cChhhCCCHHHHHHH
Confidence            999999999999886

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.57  E-value=1.2e-15  Score=122.16  Aligned_cols=88  Identities=17%  Similarity=0.272  Sum_probs=70.1

Q ss_pred             cceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH----------------HHHHhhhccCCCCCCcccc
Q psy14555          2 NVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA----------------ALYRVGFHKMHPEIPAELS   65 (222)
Q Consensus         2 ~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~   65 (222)
                      ..|+|||.+.+..|+.++||||+||++|+|++|..||..  ....                ............+.+..++
T Consensus       181 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (295)
T 3ugc_A          181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS--PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP  258 (295)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS--HHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCC
T ss_pred             cceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC--ChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcC
Confidence            459999999999999999999999999999999999852  1111                1111222334455677889


Q ss_pred             HHHHHHHHHhcccCCCCCCChhhhhc
Q psy14555         66 DKAKQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        66 ~~~~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      ..+.+++.+||..+|.+||++.+++.
T Consensus       259 ~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          259 DEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.57  E-value=1.5e-15  Score=122.57  Aligned_cols=89  Identities=21%  Similarity=0.313  Sum_probs=65.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC--CCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--HPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+.+..++.++|+||+|+++|+|++|..||..  ..............  ....+..++..+.+++.+||..
T Consensus       198 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  275 (309)
T 2h34_A          198 TLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG--DQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAK  275 (309)
T ss_dssp             CGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS--CHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCS
T ss_pred             CcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC--chHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccC
Confidence            5679999999999999999999999999999999999964  23222222222111  1234566889999999999999


Q ss_pred             CCCCCC-Chhhhhc
Q psy14555         79 DPDKRA-TAGELLE   91 (222)
Q Consensus        79 ~p~~R~-s~~~~l~   91 (222)
                      +|.+|| ++++++.
T Consensus       276 dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          276 NPEDRYVTCGDLSA  289 (309)
T ss_dssp             SGGGSCSSHHHHHH
T ss_pred             CHHHHHHhHHHHHH
Confidence            999999 7877765

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.57  E-value=7.9e-16  Score=132.17  Aligned_cols=89  Identities=19%  Similarity=0.386  Sum_probs=73.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+..+.|+.++|||||||++|||++ |..||.....  ..+............|..++..+.+||.+||..+
T Consensus       382 ~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  459 (495)
T 1opk_A          382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRMERPEGCPEKVYELMRACWQWN  459 (495)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcC
Confidence            357999999999999999999999999999999 9999975432  2233333344555667788999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.+++.
T Consensus       460 P~~RPs~~el~~  471 (495)
T 1opk_A          460 PSDRPSFAEIHQ  471 (495)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999976

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.56  E-value=1.9e-15  Score=124.20  Aligned_cols=92  Identities=11%  Similarity=0.104  Sum_probs=70.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh--hccCCCCC------CccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG--FHKMHPEI------PAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~li   72 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||.........+....  ........      +..++..+.+|+
T Consensus       231 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  310 (352)
T 2jii_A          231 DLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYL  310 (352)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHH
T ss_pred             CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHH
Confidence            5689999999999999999999999999999999999975432222222211  11111111      235689999999


Q ss_pred             HHhcccCCCCCCChhhhhcC
Q psy14555         73 LRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h   92 (222)
                      .+||..+|.+||++.+++..
T Consensus       311 ~~~l~~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          311 KVVMALTYEEKPPYAMLRNN  330 (352)
T ss_dssp             HHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHhCChhhCCCHHHHHHH
Confidence            99999999999999998763

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.56  E-value=3e-15  Score=120.99  Aligned_cols=91  Identities=15%  Similarity=0.283  Sum_probs=68.9

Q ss_pred             CcceecCcccCC---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHH
Q psy14555          1 MNVIFLTQYSVN---------SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF   71 (222)
Q Consensus         1 t~~y~aPe~~~~---------~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   71 (222)
                      |..|+|||.+.+         ..|+.++||||+||++|+|++|..||... ..................+..++..+.++
T Consensus       197 ~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  275 (319)
T 2y4i_B          197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-PAEAIIWQMGTGMKPNLSQIGMGKEISDI  275 (319)
T ss_dssp             GGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-CHHHHHHHHHTTCCCCCCCSSCCTTHHHH
T ss_pred             cccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHhccCCCCCCCcCCCCHHHHHH
Confidence            467999998764         45899999999999999999999999743 22222222222222222334678899999


Q ss_pred             HHHhcccCCCCCCChhhhhcC
Q psy14555         72 ILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        72 i~~~l~~~p~~R~s~~~~l~h   92 (222)
                      +.+||..+|.+||++.+++..
T Consensus       276 i~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          276 LLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             HHHHHCSSTTTSCCHHHHHHH
T ss_pred             HHHHhcCChhhCcCHHHHHHH
Confidence            999999999999999999863

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.56  E-value=2.2e-15  Score=120.52  Aligned_cols=90  Identities=22%  Similarity=0.354  Sum_probs=70.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATG-KPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++| .+||... .. ...............+..++..+.+++.+||..+
T Consensus       191 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  268 (298)
T 3pls_A          191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DP-FDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEAD  268 (298)
T ss_dssp             GGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CH-HHHHHHhhcCCCCCCCccchHHHHHHHHHHccCC
Confidence            4579999999999999999999999999999995 5555432 22 2222233334445556778999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++..
T Consensus       269 p~~Rps~~~ll~~  281 (298)
T 3pls_A          269 PAVRPTFRVLVGE  281 (298)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998763

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.56  E-value=8.8e-16  Score=125.01  Aligned_cols=90  Identities=11%  Similarity=0.097  Sum_probs=66.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-HHH-HHHhhh--ccCCC-CCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-QAA-LYRVGF--HKMHP-EIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-~~~-~~~~~~--~~~~~-~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||...... ... ......  ...+. .....++ .+.+++.+|
T Consensus       180 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~  258 (330)
T 2izr_A          180 TARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYV  258 (330)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHH
T ss_pred             CccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHH
Confidence            67899999999999999999999999999999999999754322 111 111111  11111 0112234 999999999


Q ss_pred             cccCCCCCCChhhhhc
Q psy14555         76 FEKDPDKRATAGELLE   91 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~   91 (222)
                      |..+|.+||++.+++.
T Consensus       259 l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          259 RRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHCCTTCCCCHHHHHH
T ss_pred             HhCCCCCCCCHHHHHH
Confidence            9999999999988765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.56  E-value=1.5e-15  Score=121.64  Aligned_cols=89  Identities=18%  Similarity=0.371  Sum_probs=70.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++ |.+||.......  .............+..++..+.+++.+||..+
T Consensus       195 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  272 (298)
T 3f66_A          195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPK  272 (298)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhcCCCCCCCccCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 677776433222  22222333444556678999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++.++++
T Consensus       273 p~~Rps~~ell~  284 (298)
T 3f66_A          273 AEMRPSFSELVS  284 (298)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999876

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.55  E-value=7.3e-16  Score=127.21  Aligned_cols=91  Identities=11%  Similarity=0.077  Sum_probs=67.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHH--HhhhccCCC------CCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY--RVGFHKMHP------EIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~li   72 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||...........  .........      ..+..++..+.+++
T Consensus       224 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  303 (364)
T 3op5_A          224 TIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYM  303 (364)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHH
T ss_pred             CCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHH
Confidence            6789999999999999999999999999999999999974222222111  100000000      01145688999999


Q ss_pred             HHhcccCCCCCCChhhhhc
Q psy14555         73 LRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~   91 (222)
                      ..||..+|.+||++.+++.
T Consensus       304 ~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          304 ETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhcCCCCCCCCHHHHHH
Confidence            9999999999999998875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.55  E-value=2.6e-16  Score=126.92  Aligned_cols=91  Identities=15%  Similarity=0.151  Sum_probs=67.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||......................+..++..+.+++.+||..+|
T Consensus       185 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  264 (310)
T 3s95_A          185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDP  264 (310)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSG
T ss_pred             CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCCh
Confidence            56799999999999999999999999999999999998642211100000000000112345678889999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       265 ~~Rps~~~l~~  275 (310)
T 3s95_A          265 EKRPSFVKLEH  275 (310)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999976

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.55  E-value=2.3e-15  Score=130.44  Aligned_cols=90  Identities=18%  Similarity=0.355  Sum_probs=74.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+..+.|+.++|||||||++|||++ |..||...  ....+............+..++..+.+||.+||..+
T Consensus       427 ~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~d  504 (535)
T 2h8h_A          427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKE  504 (535)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999 99999753  233333333444555667788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++..
T Consensus       505 P~~RPt~~~l~~~  517 (535)
T 2h8h_A          505 PEERPTFEYLQAF  517 (535)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999998763

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.55  E-value=1.9e-15  Score=122.81  Aligned_cols=89  Identities=16%  Similarity=0.236  Sum_probs=57.5

Q ss_pred             CcceecCccc---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYS---VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~---~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+   .+..|+.++||||+||++|+|++|..||...  ......   ........+...+..+.+|+.+||.
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~  287 (337)
T 3ll6_A          213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG--AKLRIV---NGKYSIPPHDTQYTVFHSLIRAMLQ  287 (337)
T ss_dssp             -----------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------CCCCTTCCSSGGGHHHHHHHSC
T ss_pred             CCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch--hHHHhh---cCcccCCcccccchHHHHHHHHHcc
Confidence            5679999988   6777899999999999999999999999632  111111   1122223345567788999999999


Q ss_pred             cCCCCCCChhhhhcCcc
Q psy14555         78 KDPDKRATAGELLEDPF   94 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~   94 (222)
                      .+|.+||++.+++.|.+
T Consensus       288 ~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          288 VNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             SSGGGSCCHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHH
Confidence            99999999999998743

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.55  E-value=6.7e-16  Score=123.11  Aligned_cols=88  Identities=19%  Similarity=0.349  Sum_probs=67.2

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATG-KPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |..|+|||.+.+ ..|+.++||||+||++|+|++| .+||.. ... .......  ......+...+..+.+|+.+||..
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~  255 (289)
T 4fvq_A          180 RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA-LDS-QRKLQFY--EDRHQLPAPKAAELANLINNCMDY  255 (289)
T ss_dssp             TTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT-SCH-HHHHHHH--HTTCCCCCCSSCTTHHHHHHHSCS
T ss_pred             cCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc-cch-HHHHHHh--hccCCCCCCCCHHHHHHHHHHcCC
Confidence            578999998887 7799999999999999999995 555543 222 2222211  123334555688899999999999


Q ss_pred             CCCCCCChhhhhcC
Q psy14555         79 DPDKRATAGELLED   92 (222)
Q Consensus        79 ~p~~R~s~~~~l~h   92 (222)
                      +|.+||++.++++|
T Consensus       256 dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          256 EPDHRPSFRAIIRD  269 (289)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhHCcCHHHHHHH
Confidence            99999999999886

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.55  E-value=3.5e-15  Score=119.68  Aligned_cols=94  Identities=20%  Similarity=0.294  Sum_probs=70.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC---CCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---PEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|+|||.+.+..++.++|+||+||++|+|++|..||.... .............+   ...+..++..+.+++.+||.
T Consensus       175 t~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  253 (294)
T 4eqm_A          175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-AVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATE  253 (294)
T ss_dssp             CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-HHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSC
T ss_pred             CccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhc
Confidence            678999999999999999999999999999999999997532 22222222221111   12345678999999999999


Q ss_pred             cCCCCCCChhhhhcCccc
Q psy14555         78 KDPDKRATAGELLEDPFL   95 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~   95 (222)
                      .+|.+||+..+.+.+.|.
T Consensus       254 ~dp~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          254 KDKANRYKTIQEMKDDLS  271 (294)
T ss_dssp             SSGGGSCSSHHHHHHHHH
T ss_pred             CCHhHccccHHHHHHHHH
Confidence            999999966666665554

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.54  E-value=3.5e-15  Score=132.22  Aligned_cols=90  Identities=16%  Similarity=0.286  Sum_probs=73.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|||++ |.+||.+.  .................+..++..+.+++.+||..+
T Consensus       555 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~d  632 (656)
T 2j0j_A          555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD  632 (656)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999997 99999753  223333333334445567788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++..
T Consensus       633 P~~RPs~~el~~~  645 (656)
T 2j0j_A          633 PSRRPRFTELKAQ  645 (656)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999998763

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.54  E-value=3.9e-15  Score=119.21  Aligned_cols=91  Identities=21%  Similarity=0.407  Sum_probs=66.8

Q ss_pred             CcceecCcccCCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCCC---hHHHHHH-hhhccCCCCC
Q psy14555          1 MNVIFLTQYSVNS------SYSPQADIWSLGCTIVEMATG----------KPPFIELGS---PQAALYR-VGFHKMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~~------~y~~~~DiWS~Gvil~ell~g----------~~Pf~~~~~---~~~~~~~-~~~~~~~~~~   60 (222)
                      |+.|+|||.+.+.      .++.++||||+||++|+|++|          ..||.....   ....... .......+..
T Consensus       180 t~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (301)
T 3q4u_A          180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNI  259 (301)
T ss_dssp             CGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             ccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCC
Confidence            6789999988877      456799999999999999999          888864221   1122222 1222233333


Q ss_pred             Cc-----cccHHHHHHHHHhcccCCCCCCChhhhhc
Q psy14555         61 PA-----ELSDKAKQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        61 ~~-----~~~~~~~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      +.     ..+..+.+|+.+||..+|.+||++.++++
T Consensus       260 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          260 PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            32     35678999999999999999999999875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.54  E-value=6.1e-15  Score=118.39  Aligned_cols=88  Identities=25%  Similarity=0.480  Sum_probs=64.2

Q ss_pred             ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh---hhccCCCCCC----ccccHHHHHHHHHhcccCCC
Q psy14555          9 YSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV---GFHKMHPEIP----AELSDKAKQFILRCFEKDPD   81 (222)
Q Consensus         9 ~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~   81 (222)
                      ...+..|+.++|+||+||++|+|++|..||.....  ......   .........+    ..++..+.+|+.+||..+|.
T Consensus       169 ~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  246 (299)
T 3m2w_A          169 ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPT  246 (299)
T ss_dssp             ECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTT
T ss_pred             ccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcc--hhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChh
Confidence            34566789999999999999999999999964221  111110   0111111222    45789999999999999999


Q ss_pred             CCCChhhhhcCcccccc
Q psy14555         82 KRATAGELLEDPFLADL   98 (222)
Q Consensus        82 ~R~s~~~~l~h~~~~~~   98 (222)
                      +||++.++++||||...
T Consensus       247 ~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          247 QRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             TSCCHHHHHTSHHHHTG
T ss_pred             hCCCHHHHhcChhhccc
Confidence            99999999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.54  E-value=2e-15  Score=122.60  Aligned_cols=92  Identities=15%  Similarity=0.150  Sum_probs=65.5

Q ss_pred             CcceecCcccCC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------------hHHHHHHh-hhccCCCCC
Q psy14555          1 MNVIFLTQYSVN-----SSYSPQADIWSLGCTIVEMATGKPPFIELGS--------------PQAALYRV-GFHKMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~-----~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~--------------~~~~~~~~-~~~~~~~~~   60 (222)
                      |+.|+|||.+.+     ..|+.++||||+||++|+|++|..||.....              ........ ......+..
T Consensus       196 t~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (322)
T 3soc_A          196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVL  275 (322)
T ss_dssp             CGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             CccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCc
Confidence            678999998876     4567789999999999999999999964211              11122111 122222222


Q ss_pred             Cc-----cccHHHHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         61 PA-----ELSDKAKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        61 ~~-----~~~~~~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      +.     ..+..+.+|+.+||..+|.+||++.+++..
T Consensus       276 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~  312 (322)
T 3soc_A          276 RDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGER  312 (322)
T ss_dssp             CGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccccccchHHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            22     234569999999999999999999998763

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.54  E-value=1.3e-15  Score=123.81  Aligned_cols=92  Identities=15%  Similarity=0.238  Sum_probs=72.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-------------hHHHHHHhhhccCCCCCCccccHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGS-------------PQAALYRVGFHKMHPEIPAELSDK   67 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~   67 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|..||.....             .................+..++..
T Consensus       193 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (327)
T 3lxl_A          193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAE  272 (327)
T ss_dssp             CGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             cccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHH
Confidence            4569999999999999999999999999999999999852110             001122222334445567788999


Q ss_pred             HHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         68 AKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        68 ~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      +.+|+.+||..+|.+||++.+++.+
T Consensus       273 l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          273 VHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999765

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.53  E-value=5.6e-16  Score=125.76  Aligned_cols=94  Identities=16%  Similarity=0.185  Sum_probs=68.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------CChHHHHHHhhh----------ccCCCCCCccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIEL------GSPQAALYRVGF----------HKMHPEIPAEL   64 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~------~~~~~~~~~~~~----------~~~~~~~~~~~   64 (222)
                      |+.|+|||.+.+..|+.++||||+||++|+|++|..||...      ............          .......+...
T Consensus       198 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (326)
T 3uim_A          198 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEE  277 (326)
T ss_dssp             CGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHH
T ss_pred             CcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHH
Confidence            67899999998999999999999999999999999999410      000111111000          01112233455


Q ss_pred             cHHHHHHHHHhcccCCCCCCChhhhhcCcc
Q psy14555         65 SDKAKQFILRCFEKDPDKRATAGELLEDPF   94 (222)
Q Consensus        65 ~~~~~~li~~~l~~~p~~R~s~~~~l~h~~   94 (222)
                      +..+.+++.+||..+|.+||++.++++|-.
T Consensus       278 ~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          278 VEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            688999999999999999999999998754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.53  E-value=1.3e-15  Score=123.54  Aligned_cols=93  Identities=14%  Similarity=0.248  Sum_probs=69.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH----HHH--HHhhh--------ccCCCCCCccccH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ----AAL--YRVGF--------HKMHPEIPAELSD   66 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~----~~~--~~~~~--------~~~~~~~~~~~~~   66 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|+.||.......    ...  .....        .......+...+.
T Consensus       204 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (321)
T 2qkw_B          204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLR  283 (321)
T ss_dssp             ETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHH
T ss_pred             CccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHH
Confidence            567999999989999999999999999999999999996422110    000  00000        0111223455678


Q ss_pred             HHHHHHHHhcccCCCCCCChhhhhcCc
Q psy14555         67 KAKQFILRCFEKDPDKRATAGELLEDP   93 (222)
Q Consensus        67 ~~~~li~~~l~~~p~~R~s~~~~l~h~   93 (222)
                      .+.+++.+||..+|.+||++.+++.+.
T Consensus       284 ~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          284 KFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            899999999999999999999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=1.1e-14  Score=118.39  Aligned_cols=92  Identities=21%  Similarity=0.333  Sum_probs=68.0

Q ss_pred             CcceecCcccCCCCCCch------hhHHHHHHHHHHHHhC----------CCCCCCCCC---hHHHH-HHhhhccCCCCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQ------ADIWSLGCTIVEMATG----------KPPFIELGS---PQAAL-YRVGFHKMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~------~DiWS~Gvil~ell~g----------~~Pf~~~~~---~~~~~-~~~~~~~~~~~~   60 (222)
                      |+.|+|||.+.+..++..      +||||+||++|||++|          ..||.....   ..... .........+..
T Consensus       209 t~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (337)
T 3mdy_A          209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSF  288 (337)
T ss_dssp             CGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             CcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccc
Confidence            678999999988877765      9999999999999999          777753211   11122 112223333344


Q ss_pred             Cc-----cccHHHHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         61 PA-----ELSDKAKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        61 ~~-----~~~~~~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      +.     .++..+.+|+.+||..+|.+||++.++++|
T Consensus       289 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          289 PNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            43     567789999999999999999999999876

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.52  E-value=2.8e-15  Score=119.01  Aligned_cols=89  Identities=16%  Similarity=0.235  Sum_probs=71.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||.+.+..|+.++|+||+||++|+|++|..|+..   . .........   ...+..++..+.+++.+||..+|
T Consensus       184 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~---~-~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp  256 (284)
T 2a19_B          184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE---T-SKFFTDLRD---GIISDIFDKKEKTLLQKLLSKKP  256 (284)
T ss_dssp             CCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH---H-HHHHHHHHT---TCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             cccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh---H-HHHHHHhhc---ccccccCCHHHHHHHHHHccCCh
Confidence            5789999999999999999999999999999999988742   1 122211111   12345678999999999999999


Q ss_pred             CCCCChhhhhcCcccc
Q psy14555         81 DKRATAGELLEDPFLA   96 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~   96 (222)
                      .+||++.+++.|.+..
T Consensus       257 ~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          257 EDRPNTSEILRTLTVW  272 (284)
T ss_dssp             GGSCCHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHH
Confidence            9999999999998754

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.52  E-value=4e-15  Score=120.56  Aligned_cols=91  Identities=16%  Similarity=0.216  Sum_probs=71.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh----------H---HHHHHhhhccCCCCCCccccHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP----------Q---AALYRVGFHKMHPEIPAELSDK   67 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~----------~---~~~~~~~~~~~~~~~~~~~~~~   67 (222)
                      |..|+|||.+.+..|+.++||||+||++|+|++|..||......          .   ...............+..++..
T Consensus       200 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (318)
T 3lxp_A          200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE  279 (318)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             CceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHH
Confidence            45699999999999999999999999999999999998521000          0   0111222334455567788999


Q ss_pred             HHHHHHHhcccCCCCCCChhhhhc
Q psy14555         68 AKQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        68 ~~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      +.+|+.+||..+|.+||++.+++.
T Consensus       280 l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          280 VYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999999975

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.50  E-value=6.7e-15  Score=118.00  Aligned_cols=91  Identities=21%  Similarity=0.311  Sum_probs=70.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------------C-ChHHHHHHhhhccCCCCCCccccHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIEL------------G-SPQAALYRVGFHKMHPEIPAELSDK   67 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~   67 (222)
                      |..|+|||.+.+..|+.++|+||+||++|+|++|..|+...            + ..................+..++..
T Consensus       192 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (302)
T 4e5w_A          192 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDE  271 (302)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             CccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHH
Confidence            45699999999999999999999999999999999886310            0 1111222223344455567788999


Q ss_pred             HHHHHHHhcccCCCCCCChhhhhc
Q psy14555         68 AKQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        68 ~~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      +.+|+.+||..+|.+||++.++++
T Consensus       272 l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          272 VYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHHH
Confidence            999999999999999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.50  E-value=4.7e-15  Score=120.72  Aligned_cols=97  Identities=20%  Similarity=0.186  Sum_probs=66.4

Q ss_pred             CcceecCcccCC-------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC----------------hHHHH-HHhhhccC
Q psy14555          1 MNVIFLTQYSVN-------SSYSPQADIWSLGCTIVEMATGKPPFIELGS----------------PQAAL-YRVGFHKM   56 (222)
Q Consensus         1 t~~y~aPe~~~~-------~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~----------------~~~~~-~~~~~~~~   56 (222)
                      |+.|+|||.+.+       ..|+.++||||+||++|||++|..||.....                ..... ........
T Consensus       191 t~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (336)
T 3g2f_A          191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ  270 (336)
T ss_dssp             CGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC
T ss_pred             ccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhccccc
Confidence            678999998887       5677899999999999999999766532111                00111 11111222


Q ss_pred             CCCCCc------cccHHHHHHHHHhcccCCCCCCChhhhhc------Cccccc
Q psy14555         57 HPEIPA------ELSDKAKQFILRCFEKDPDKRATAGELLE------DPFLAD   97 (222)
Q Consensus        57 ~~~~~~------~~~~~~~~li~~~l~~~p~~R~s~~~~l~------h~~~~~   97 (222)
                      .+..+.      ..+..+.+|+.+||..+|.+||++.+++.      ++|-++
T Consensus       271 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          271 RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            222222      25668999999999999999999999954      566554

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.50  E-value=5.9e-15  Score=126.29  Aligned_cols=91  Identities=12%  Similarity=0.121  Sum_probs=68.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhh---hccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVG---FHKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|+|||.+.+..|+.++|||||||++|+|++|..||......  ...+....   ........+..++.++.+|+.+|
T Consensus       176 t~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~c  255 (483)
T 3sv0_A          176 TARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYC  255 (483)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHH
T ss_pred             CccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHH
Confidence            67899999999999999999999999999999999999754332  11111111   11111112245688999999999


Q ss_pred             cccCCCCCCChhhhhc
Q psy14555         76 FEKDPDKRATAGELLE   91 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~   91 (222)
                      |..+|.+||++.+++.
T Consensus       256 l~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          256 RSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HTCCTTCCCCHHHHHH
T ss_pred             hcCChhhCcCHHHHHH
Confidence            9999999999987654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.49  E-value=4.6e-15  Score=120.52  Aligned_cols=88  Identities=18%  Similarity=0.274  Sum_probs=69.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH-----------------HHHhhhccCCCCCCcc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA-----------------LYRVGFHKMHPEIPAE   63 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~-----------------~~~~~~~~~~~~~~~~   63 (222)
                      |..|+|||.+.+..++.++||||+||++|+|++|..||..   ....                 +..........+.+..
T Consensus       211 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (326)
T 2w1i_A          211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS---PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG  287 (326)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS---HHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTT
T ss_pred             ceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC---CHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCc
Confidence            3469999999888999999999999999999999999842   1111                 1111222334455677


Q ss_pred             ccHHHHHHHHHhcccCCCCCCChhhhhc
Q psy14555         64 LSDKAKQFILRCFEKDPDKRATAGELLE   91 (222)
Q Consensus        64 ~~~~~~~li~~~l~~~p~~R~s~~~~l~   91 (222)
                      ++..+.+++.+||..+|.+||++.+++.
T Consensus       288 ~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          288 CPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            8999999999999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.48  E-value=1.9e-14  Score=117.35  Aligned_cols=92  Identities=21%  Similarity=0.312  Sum_probs=66.6

Q ss_pred             CcceecCcccCCC------CCCchhhHHHHHHHHHHHHhC----------CCCCCCCCC---hHHHHHHh-hhccCCCCC
Q psy14555          1 MNVIFLTQYSVNS------SYSPQADIWSLGCTIVEMATG----------KPPFIELGS---PQAALYRV-GFHKMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~~------~y~~~~DiWS~Gvil~ell~g----------~~Pf~~~~~---~~~~~~~~-~~~~~~~~~   60 (222)
                      |+.|+|||.+.+.      .++.++||||+||++|+|++|          ..||.....   ........ ......+..
T Consensus       214 t~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (342)
T 1b6c_B          214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI  293 (342)
T ss_dssp             CGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             CcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCC
Confidence            5789999988776      334789999999999999999          788864321   12222222 222333333


Q ss_pred             Cc-----cccHHHHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         61 PA-----ELSDKAKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        61 ~~-----~~~~~~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      +.     ..+..+.+|+.+||..+|.+||++.+++.|
T Consensus       294 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          294 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            32     345688999999999999999999999876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.47  E-value=1.1e-14  Score=117.11  Aligned_cols=91  Identities=18%  Similarity=0.284  Sum_probs=66.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChH--HHHHHhh----------hccCCCCCCccccHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQ--AALYRVG----------FHKMHPEIPAELSDKA   68 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~   68 (222)
                      |+.|+|||.+.+ .++.++|+||+||++|+|++|.+||.......  ..+....          ........+...+..+
T Consensus       198 ~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  276 (307)
T 2nru_A          198 TTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM  276 (307)
T ss_dssp             CGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHH
T ss_pred             CcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHH
Confidence            568999997754 58999999999999999999999997432211  0111100          1111223445667889


Q ss_pred             HHHHHHhcccCCCCCCChhhhhcC
Q psy14555         69 KQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        69 ~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      .+++.+||..+|.+||++.+++++
T Consensus       277 ~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          277 YSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.43  E-value=1.6e-14  Score=120.63  Aligned_cols=91  Identities=18%  Similarity=0.299  Sum_probs=66.5

Q ss_pred             CcceecCcccCC--------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---hHHHHHHhhhccCC------------
Q psy14555          1 MNVIFLTQYSVN--------SSYSPQADIWSLGCTIVEMATGKPPFIELGS---PQAALYRVGFHKMH------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~--------~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~---~~~~~~~~~~~~~~------------   57 (222)
                      |..|+|||.+.+        ..|+.++||||+||++|+|++|..||.....   ....+..... ..+            
T Consensus       178 t~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~  256 (396)
T 4eut_A          178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT-GKPSGAISGVQKAEN  256 (396)
T ss_dssp             CCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH-SCCTTCCEEEECSTT
T ss_pred             CccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc-CCCcccchhheeccC
Confidence            678999998764        6788999999999999999999999963221   1222222211 111            


Q ss_pred             ------------CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         58 ------------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        58 ------------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                                  ...+..++..+.+++.+||..||.+||++.+++.+
T Consensus       257 ~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          257 GPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             CCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             CCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence                        11224567788999999999999999999998553

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.31  E-value=5.2e-13  Score=110.09  Aligned_cols=85  Identities=12%  Similarity=0.074  Sum_probs=62.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|+.||.....  ..   ..........  ..++...+++.+||..+|
T Consensus       248 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~---~~~~~~~~~~--~~~~~~~~~~~~~l~~~p  320 (365)
T 3e7e_A          248 TSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG--GE---CKPEGLFRRL--PHLDMWNEFFHVMLNIPD  320 (365)
T ss_dssp             TTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET--TE---EEECSCCTTC--SSHHHHHHHHHHHHCCCC
T ss_pred             CCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC--Cc---eeechhcccc--CcHHHHHHHHHHHcCCCC
Confidence            6789999999999999999999999999999999999953211  00   0011111111  246788899999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+|++..+.+.+
T Consensus       321 ~~r~~~~~~l~~  332 (365)
T 3e7e_A          321 CHHLPSLDLLRQ  332 (365)
T ss_dssp             TTCCCCHHHHHH
T ss_pred             CCcchHHHHHHH
Confidence            999655444443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.20  E-value=1.5e-12  Score=115.88  Aligned_cols=86  Identities=14%  Similarity=0.147  Sum_probs=66.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCC-CccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEI-PAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.++ ++.++||||+||++|+|++|.+||.....          ....... ....++.+.+++.+||..+
T Consensus       240 t~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~~~~~~~~~~~~~l~~li~~~l~~d  308 (681)
T 2pzi_A          240 TPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV----------DGLPEDDPVLKTYDSYGRLLRRAIDPD  308 (681)
T ss_dssp             CTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSCCTTCHHHHHCHHHHHHHHHHTCSS
T ss_pred             CccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc----------ccccccccccccCHHHHHHHhhhccCC
Confidence            6789999987654 58999999999999999999999853110          0111111 1234678999999999999


Q ss_pred             CCCCCChhhhhcCccccc
Q psy14555         80 PDKRATAGELLEDPFLAD   97 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~   97 (222)
                      |.+||+..+.+.|+|+..
T Consensus       309 P~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          309 PRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             GGGSCSSHHHHHHHHHHH
T ss_pred             hhhCCCHHHHHHHHHHHH
Confidence            999999999999988753

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.20  E-value=1.5e-12  Score=104.06  Aligned_cols=78  Identities=19%  Similarity=0.233  Sum_probs=55.2

Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHH-HHHhhhccCCC---CCCccccHHHHHHHHHhcccCCCCCCChhhh
Q psy14555         14 SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAA-LYRVGFHKMHP---EIPAELSDKAKQFILRCFEKDPDKRATAGEL   89 (222)
Q Consensus        14 ~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~   89 (222)
                      .++.++||||+||++|+|++|+.||.+....... ...........   ..+..++..+.+++.+||..||.+| ++.++
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el  256 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTL  256 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHH
Confidence            4799999999999999999999999753221100 00000001000   1224678999999999999999999 99999


Q ss_pred             hcC
Q psy14555         90 LED   92 (222)
Q Consensus        90 l~h   92 (222)
                      +..
T Consensus       257 ~~~  259 (286)
T 3uqc_A          257 LNL  259 (286)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.19  E-value=1.9e-12  Score=105.51  Aligned_cols=88  Identities=15%  Similarity=0.097  Sum_probs=63.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCChH-HHHHHhhh----ccCC--CCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCT-IVEMATGKPPFIELGSPQ-AALYRVGF----HKMH--PEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvi-l~ell~g~~Pf~~~~~~~-~~~~~~~~----~~~~--~~~~~~~~~~~~~li   72 (222)
                      |+.|+|||.+.+.. +.++||||+|++ .+++++|..||..  ... ........    ....  ...+..+++++.+|+
T Consensus       240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli  316 (336)
T 2vuw_A          240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN--VLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFH  316 (336)
T ss_dssp             CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH--HHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred             eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc--hhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHH
Confidence            78899999988766 899999998777 7788889999842  110 11111111    1111  112346789999999


Q ss_pred             HHhcccCCCCCCChhhhh-cCcccc
Q psy14555         73 LRCFEKDPDKRATAGELL-EDPFLA   96 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l-~h~~~~   96 (222)
                      .+||..+     |+++++ +||||+
T Consensus       317 ~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          317 RTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHGGGSS-----SHHHHHHHCGGGC
T ss_pred             HHHhccC-----CHHHHHhcCCCcC
Confidence            9999976     999999 999985

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=95.70  E-value=0.00012  Score=63.70  Aligned_cols=79  Identities=9%  Similarity=-0.023  Sum_probs=32.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||.+.+ .+..++|+||+|++++++.++..++.      ....     ..+..     ...+..+...+...+|
T Consensus       402 Tp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~~------~~l~-----~~~~~-----~~~~~~l~~~l~~~~~  464 (569)
T 4azs_A          402 SFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNWL------YAVW-----QEPVE-----RWNFVLLLALFEKKAK  464 (569)
T ss_dssp             HHHHHHHHHC------------------CCCCTTHHHHH------HHHH-----TSCGG-----GCSHHHHHHHHHTGGG
T ss_pred             chhhccHHHhCC-CCCCcccccccccchhhhccccchhH------HHhh-----cCCCC-----CCcHHHHHHHHhCCCC
Confidence            678999998765 57889999999999888765543331      0000     01100     0112345555666667


Q ss_pred             CCCCChhhhhcCcccc
Q psy14555         81 DKRATAGELLEDPFLA   96 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~   96 (222)
                      ..|+.......++|..
T Consensus       465 ~~~~~~~~~~~~~~~~  480 (569)
T 4azs_A          465 LPSAEQQRGATEQWII  480 (569)
T ss_dssp             SCCGGGSSCCHHHHHH
T ss_pred             CCCCChhhhccchhHH
Confidence            7776666555555543

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=95.64  E-value=0.019  Score=37.75  Aligned_cols=56  Identities=18%  Similarity=0.172  Sum_probs=40.5

Q ss_pred             HHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        152 VWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       152 ~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ..++.++. ++++.++.++++.++..+...+       -+++++++++++|.|++|...+..++
T Consensus        40 ~~F~~~D~-d~~G~I~~~El~~~l~~lg~~~-------~~~ei~~l~~~~D~d~dG~I~~~EF~   95 (100)
T 2lv7_A           40 EAFKVFDR-DGNGFISKQELGTAMRSLGYMP-------NEVELEVIIQRLDMDGDGQVDFEEFV   95 (100)
T ss_dssp             HHHHHTCS-SCSSCBCHHHHHHHHHHHTCCC-------CTTTHHHHHHHHCSSCSSSBCHHHHH
T ss_pred             HHHHHHcC-CCCCcCCHHHHHHHHHHhCCCC-------CHHHHHHHHHHHCCCCCCeEeHHHHH
Confidence            33455544 6999999998888555543322       24568899999999999987777655

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=94.54  E-value=0.13  Score=33.57  Aligned_cols=60  Identities=10%  Similarity=-0.025  Sum_probs=42.0

Q ss_pred             HHhhhccc--CCcccCHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDV--DDCLLSKAHLEILMQGMR-DNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~--~~~~ls~~~i~~l~~~~~-~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++.+.  .++.++.++++.++..+. ..+.   ......+++++++++|.|++|...+..++.
T Consensus        17 F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~---~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~   79 (100)
T 3nxa_A           17 FYKYVSKYSLVKNKISKSSFREMLQKELNHMLS---DTGNRKAADKLIQNLDANHDGRISFDEYWT   79 (100)
T ss_dssp             HHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTC---SSHHHHHHHHHHHHSCCCSSCCBCHHHHHH
T ss_pred             HHHHcCcCCCCCCeEcHHHHHHHHHHHcccccc---ccccHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            35555543  489999998888665432 2221   123467899999999999999888777654

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=94.46  E-value=0.078  Score=34.20  Aligned_cols=59  Identities=14%  Similarity=0.080  Sum_probs=39.9

Q ss_pred             HhhhcccC-CcccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVD-DCLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~-~~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +.++..++ .+.+|.++++.++.. +...+.   ...-..+++++++++|.|++|...+...+.
T Consensus        17 ~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~---~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~   77 (93)
T 4eto_A           17 HKYSGKEGDKFKLNKSELKELLTRELPSFLG---KRTDEAAFQKLMSNLDSNRDNEVDFQEYCV   77 (93)
T ss_dssp             HHHHTSSSSTTSBCHHHHHHHHHHHCGGGC------CCHHHHHHHHHHHCTTSSSSBCHHHHHH
T ss_pred             HHHcccCCCCCeECHHHHHHHHHHHhhhhcc---CCCCHHHHHHHHHHHCCCCCCCCcHHHHHH
Confidence            45553345 479999988886653 333222   112367899999999999999888776654

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=94.45  E-value=0.03  Score=36.92  Aligned_cols=58  Identities=14%  Similarity=0.072  Sum_probs=40.7

Q ss_pred             HhhhcccCC-cccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        155 KCIQRDVDD-CLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       155 ~~~~~~~~~-~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +.++..+++ +.+|.++++.++.. +..++.   ...-..+++++++++|.|++|...+..++
T Consensus        17 ~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg---~~~~~~ev~~~i~~~D~dgDG~Idf~EF~   76 (101)
T 3nso_A           17 QEYAGRCGDKYKLCQAELKELLQKELATWTP---TEFRECDYNKFMSVLDTNKDCEVDFVEYV   76 (101)
T ss_dssp             HHHHTTSSCTTEECHHHHHHHHHHHTTTCCC---CTTCHHHHHHHHHHHHHCCCSCEEHHHHH
T ss_pred             HHHhhcCCCCCEECHHHHHHHHHHHhhhhcC---CCCCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            455533455 99999988886653 332222   12346789999999999999988877665

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=94.34  E-value=0.076  Score=35.11  Aligned_cols=59  Identities=14%  Similarity=0.089  Sum_probs=40.7

Q ss_pred             HhhhcccCC-cccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDD-CLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~-~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ..++..+++ +.++.++++.++.. +..++..   ..-..+++++++++|.|++|...+..++.
T Consensus        20 ~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~---~~~~~ev~~~i~~~D~dgDG~Idf~EF~~   80 (104)
T 3zwh_A           20 HKYSGKEGDKFKLNKSELKELLTRELPSWLGK---RTDEAAFQKLMSNLDSNRDNEVDFQEYCV   80 (104)
T ss_dssp             HHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCS---SCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHhccCCCCCeECHHHHHHHHHHHcchhccC---CCCHHHHHHHHHHHcCCCCCCCcHHHHHH
Confidence            445433454 79999988886653 3332221   12367899999999999999888877654

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=94.15  E-value=0.12  Score=30.25  Aligned_cols=52  Identities=10%  Similarity=0.014  Sum_probs=39.4

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .++++.++.+++..++..+..       ..-..++..++..+|.|++|.......+..+
T Consensus        11 ~d~~G~i~~~e~~~~l~~~~~-------~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~   62 (66)
T 3li6_A           11 VNGDGAVSYEEVKAFVSKKRA-------IKNEQLLQLIFKSIDADGNGEIDQNEFAKFY   62 (66)
T ss_dssp             TTCSSSCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHCTTCSSSCCHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHccC-------CCcHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            368899999988886655432       3456789999999999999987766655443

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=93.63  E-value=0.12  Score=31.21  Aligned_cols=56  Identities=9%  Similarity=0.100  Sum_probs=40.0

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      +..++ .++++.++.+++...+..+.   .    ..-..++..++..+|.|++|.......+..
T Consensus        13 F~~~D-~d~~G~i~~~el~~~l~~~g---~----~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~   68 (77)
T 2joj_A           13 FDLFD-TNKTGSIDYHELKVAMRALG---F----DVKKPEILELMNEYDREGNGYIGFDDFLDI   68 (77)
T ss_dssp             HHHHC-CSSSSEEEHHHHHHHHHHHT---C----CCHHHHHHHHHHHHCCSSSSEEEHHHHHHH
T ss_pred             HHHhC-CCCCCCCcHHHHHHHHHHhC---C----CCCHHHHHHHHHHHCCCCCCcCcHHHHHHH
Confidence            34444 36889999998888555442   1    344677999999999999998776665543

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=93.16  E-value=0.16  Score=31.97  Aligned_cols=58  Identities=9%  Similarity=0.090  Sum_probs=40.3

Q ss_pred             HHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        152 VWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       152 ~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      ..+..++ .++++.++.+++..++..+..       ..-..++..++..+|.|++|...+..++..
T Consensus        24 ~~F~~~D-~d~~G~i~~~el~~~l~~~g~-------~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~   81 (90)
T 1avs_A           24 AAFDMFD-ADGGGDISTKELGTVMRMLGQ-------NPTKEELDAIIEEVDEDGSGTIDFEEFLVM   81 (90)
T ss_dssp             HHHHHHC-TTCSSEECHHHHHHHHHHTTC-------CCCHHHHHHHHHHHCTTCCSSEEHHHHHHH
T ss_pred             HHHHHHC-CCCCCcCcHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence            3334444 368999999988885544321       233667899999999999998777665543

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=93.03  E-value=0.23  Score=31.95  Aligned_cols=61  Identities=16%  Similarity=0.073  Sum_probs=40.6

Q ss_pred             HHHhhhcccCCc-ccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDC-LLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~-~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++.++..++++ .++.++++.++... ..++.   ...-..++++++.++|.|++|...+..++.
T Consensus        17 ~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg---~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~   79 (95)
T 2wcb_A           17 IFHQYSVRKGHFDTLSKGELKQLLTKELANTIK---NIKDKAVIDEIFQGLDANQDEQVDFQEFIS   79 (95)
T ss_dssp             HHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHH---HCCCHHHHHHHHTTSSSSTTSEEEHHHHHH
T ss_pred             HHHHHhccCCCCCccCHHHHHHHHHHHhhhhcc---ccccHHHHHHHHHHHcCCCCCcCcHHHHHH
Confidence            445665335676 99999998866532 11111   112356799999999999999877766554

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=92.90  E-value=0.17  Score=33.95  Aligned_cols=61  Identities=13%  Similarity=0.070  Sum_probs=40.6

Q ss_pred             HHHhhhcccCCc-ccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDC-LLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~-~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++.++..++++ .++.++++.++.. +..++..   ..-+.++++++.++|.|++|...+..++.
T Consensus        27 aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~---~~t~~ev~~li~~~D~dgdG~Idf~EF~~   89 (113)
T 2lnk_A           27 TFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK---RTDEAAFQKLMSNLDSNRDNEVDFQEYCV   89 (113)
T ss_dssp             HHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTT---CCCTTHHHHHHHHHCSSSSSCBCHHHHHH
T ss_pred             HHHHHcccCCCCCEECHHHHHHHHHHHcchhcCC---CCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            445665335676 9999988886643 2222211   12246789999999999999877776654

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=92.76  E-value=0.26  Score=31.99  Aligned_cols=61  Identities=13%  Similarity=0.078  Sum_probs=40.4

Q ss_pred             HHHhhhcccCCc-ccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDC-LLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~-~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++.++..++++ .++.++++.++... ..++.   ...-..+++.++.++|.|++|...+..++.
T Consensus        15 ~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg---~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~   77 (99)
T 2y5i_A           15 VFHNYSGSEGDKYKLSKGELKELLNAELTDFLM---SQKDPMLVEKIMNDLDSNKDNEVDFNEFVV   77 (99)
T ss_dssp             HHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGT---TSCCHHHHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred             HHHHHhccCCCcCcCCHHHHHHHHHHHhhhhcc---ccccHHHHHHHHHHHCCCCCCcCcHHHHHH
Confidence            345555345666 99999888865432 11121   122356799999999999999877776654

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=92.53  E-value=0.35  Score=32.13  Aligned_cols=61  Identities=10%  Similarity=0.145  Sum_probs=40.8

Q ss_pred             HHhhhcccCCc-ccCHHHHHHHHH-HHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDC-LLSKAHLEILMQ-GMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~-~ls~~~i~~l~~-~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++..++++ .++.+++..++. .+...+.  +...-..+++.++.++|.|++|...+..++.
T Consensus        18 F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~--~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~   80 (113)
T 1xk4_C           18 FHQYSVKLGHPDTLNQGEFKELVRKDLQNFLK--KENKNEKVIEHIMEDLDTNADKQLSFEEFIM   80 (113)
T ss_dssp             HHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTT--TGGGCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHHhhcCCCCCEECHHHHHHHHHHHhhhhhc--ccccCHHHHHHHHHHhCCCCCCCEeHHHHHH
Confidence            34555446888 999998888554 2322211  1112366799999999999999877776653

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=92.52  E-value=0.28  Score=31.33  Aligned_cols=57  Identities=11%  Similarity=0.171  Sum_probs=40.4

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      .+..++ .++++.++.+++..++..+..       ..-.++++.++..+|.|+.|......++..
T Consensus        34 ~F~~~D-~d~~G~I~~~El~~~l~~~g~-------~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~   90 (94)
T 2kz2_A           34 AFRVED-KDGNGYISAAELRHVMTNLGE-------KLTDEEVDEMIREADIDGDGQVNYEEFVQM   90 (94)
T ss_dssp             HHHHHC-TTCCSCBCHHHHHHHHHHHTC-------CCCHHHHHHHHHHHCTTCSSSBCHHHHHHH
T ss_pred             HHHHHC-CCCcCcCCHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            334444 368899999988885554422       233567899999999999998777666543

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=92.37  E-value=0.17  Score=32.21  Aligned_cols=57  Identities=9%  Similarity=0.008  Sum_probs=39.3

Q ss_pred             HHHhhhcccCCc-ccCHHHHHHHH-HHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDC-LLSKAHLEILM-QGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~-~ls~~~i~~l~-~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+..++..++++ .++.+++..++ ..+...+       -..+++.++..+|.|+.|...+...+.
T Consensus        15 ~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~-------~~~~~~~l~~~~D~d~dG~I~~~EF~~   73 (93)
T 1xk4_A           15 VYHKYSLIKGNFHAVYRDDLKKLLETESPQYI-------RKKGADVWFKELDINTDGAVNFQEFLI   73 (93)
T ss_dssp             HHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHH-------HTTCHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHHHhhcCCCcCeECHHHHHHHHHHHCcccC-------CHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            345555537888 99999888865 3332222       235678999999999999877766553

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=92.17  E-value=0.21  Score=31.59  Aligned_cols=57  Identities=12%  Similarity=0.047  Sum_probs=40.7

Q ss_pred             HHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        152 VWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       152 ~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ..++.++ .++++.++.+++..++..+.         .-..++..++..+|.|++|...+...+..+
T Consensus        31 ~~F~~~D-~d~~G~I~~~El~~~l~~~g---------~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~   87 (91)
T 2pmy_A           31 SVFAACD-ANRSGRLEREEFRALCTELR---------VRPADAEAVFQRLDADRDGAITFQEFARGF   87 (91)
T ss_dssp             HHHHHHC-TTCSSSEEHHHHHHHHHHTT---------CCHHHHHHHHHHHCTTCSSEECHHHHTHHH
T ss_pred             HHHHHHC-CCCCCCCcHHHHHHHHHHcC---------cCHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            3344444 36899999998888555442         124678999999999999988777766544

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=91.89  E-value=0.32  Score=30.93  Aligned_cols=51  Identities=10%  Similarity=0.070  Sum_probs=35.3

Q ss_pred             CcccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        163 DCLLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       163 ~~~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+.++.++++.++... ...+.   ......++++++.++|.|++|...+...+.
T Consensus        25 ~g~Is~~EL~~~l~~~~~~~lg---~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~   76 (92)
T 3rm1_A           25 KHKLKKSELKELINNELSHFLE---EIKEQEVVDKVMETLDSNGDGECDFQEFMA   76 (92)
T ss_dssp             TTSBCHHHHHHHHHHHCTTTSC---CCCSHHHHHHHHHHHCTTSSSSBCHHHHHH
T ss_pred             cCeECHHHHHHHHHHHhhhhcc---CcccHHHHHHHHHHHcCCCCCCCcHHHHHH
Confidence            4599999888855541 11111   123467899999999999999877776554

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=91.83  E-value=0.43  Score=29.17  Aligned_cols=60  Identities=13%  Similarity=0.082  Sum_probs=38.8

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +..++ .++++.++.+++...+..+... .....+.+..-++.++..+|.|++|.......+
T Consensus        13 F~~~D-~d~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~   72 (83)
T 1yx7_A           13 FKKLD-ANGDGYVTALELQTFMVTLDAY-KALSKDKVKEASAKLIKMADKNSDGKISKEEFL   72 (83)
T ss_dssp             HHHHS-SSCSSSCSHHHHHHHHHHHTTC-TTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHH
T ss_pred             HHHHC-CCCCCcCcHHHHHHHHHHHccc-cCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            34444 3688999999888866555310 112233334444559999999999987766655

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=91.76  E-value=0.26  Score=30.52  Aligned_cols=55  Identities=13%  Similarity=0.112  Sum_probs=38.7

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+..++ .++++.++.+++..++..+.        ..-..++..++..+|.|++|.......+.
T Consensus        16 ~F~~~D-~d~~G~i~~~el~~~l~~~g--------~~~~~~~~~~~~~~D~~~dg~i~~~eF~~   70 (86)
T 2opo_A           16 IFKRFD-TNGDGKISSSELGDALKTLG--------SVTPDEVRRMMAEIDTDGDGFISFDEFTD   70 (86)
T ss_dssp             HHHHHC-TTCSSEEEHHHHHHHHHTTT--------TCCHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             HHHHHC-CCCCCCcCHHHHHHHHHHcC--------CCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            334444 36899999998887554432        23356789999999999999876665544

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=91.72  E-value=0.27  Score=31.30  Aligned_cols=48  Identities=4%  Similarity=-0.040  Sum_probs=35.6

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++.++.+++..++..+.         .-.+++.+++.++|.|++|......++.
T Consensus        20 ~d~dG~I~~~el~~~l~~~g---------~~~~~~~~i~~~~D~d~dG~i~~~EF~~   67 (92)
T 1fi6_A           20 PDLNGFIPGSAAKEFFTKSK---------LPILELSHIWELSDFDKDGALTLDEFCA   67 (92)
T ss_dssp             CSTTCEEEHHHHHHHHHHHS---------SCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHHcC---------CCHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence            36899999998888554431         1255788999999999999766665544

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=91.70  E-value=0.29  Score=30.77  Aligned_cols=54  Identities=13%  Similarity=0.196  Sum_probs=38.2

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ..++ .++++.++.+++..++..+..       ..-..++..++..+|.|++|.......+.
T Consensus        16 ~~~D-~d~~G~i~~~el~~~l~~~g~-------~~~~~~~~~l~~~~d~~~dg~i~~~eF~~   69 (92)
T 2kn2_A           16 KVFD-KDQNGYISASELRHVMINLGE-------KLTDEEVEQMIKEADLDGDGQVNYEEFVK   69 (92)
T ss_dssp             HHHC-TTCSSEECHHHHHHHHHHTTC-------CCCHHHHHHHHHHHCSSCCSSEEHHHHHH
T ss_pred             HHHC-CCCCCeEcHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            4444 368899999988885544322       23366789999999999999766665543

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=91.67  E-value=0.18  Score=34.26  Aligned_cols=50  Identities=12%  Similarity=0.093  Sum_probs=36.2

Q ss_pred             CcccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        163 DCLLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       163 ~~~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ++.+|.++++.++... ..++.   ...-..+++++++++|.|++|...+..++
T Consensus        28 dG~Is~~EL~~~l~~~~~~~l~---~~~~~~~v~~~i~~~D~d~DG~IdF~EF~   78 (121)
T 4drw_A           28 KGYLTKEDLRVLMEKEFPGFLE---NQKDPLAVDKIMKDLDQCRDGKVGFQSFF   78 (121)
T ss_dssp             TCSCCHHHHHHHTTTSCHHHHT---TSSCTTHHHHHHHHHCTTCSSCCCHHHHH
T ss_pred             CCEEcHHHHHHHHHHHhhhhcc---cCCCHHHHHHHHHHHcCCCCCcCcHHHHH
Confidence            7999999888865431 12222   12335679999999999999998887765

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=91.32  E-value=0.33  Score=31.18  Aligned_cols=61  Identities=15%  Similarity=0.103  Sum_probs=37.7

Q ss_pred             HHHhhhcccC-CcccCHHHHHHHHHHHH-HhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVD-DCLLSKAHLEILMQGMR-DNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~-~~~ls~~~i~~l~~~~~-~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++.++..++ .+.++.++++.++.... ..+.   ...-..++++++.++|.|++|...+..++.
T Consensus        14 ~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg---~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~   76 (95)
T 1j55_A           14 VFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQ---SGKDKDAVDKLLKDLDANGDAQVDFSEFIV   76 (95)
T ss_dssp             HHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC---------CHHHHHHHHHCSSSSSSEEHHHHHH
T ss_pred             HHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcc---cccCHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence            3455553344 57999998888554321 1111   123456789999999999999877766553

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=91.26  E-value=0.16  Score=29.61  Aligned_cols=52  Identities=12%  Similarity=0.043  Sum_probs=37.7

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .++++.++.+++..++..+..       ..-..++..++..+|.|++|.......+..+
T Consensus        12 ~d~~G~i~~~el~~~l~~~~~-------~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~   63 (67)
T 1tiz_A           12 KNKDGKLSLDEFREVALAFSP-------YFTQEDIVKFFEEIDVDGNGELNADEFTSCI   63 (67)
T ss_dssp             TTSSSCEEHHHHHHHHHHTCT-------TSCHHHHHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHHhCC-------CCCHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence            368899999988885544321       2335678999999999999987776655443

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=90.80  E-value=0.46  Score=28.69  Aligned_cols=49  Identities=12%  Similarity=0.128  Sum_probs=36.8

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++.++.+++..++..+. .       .-..++..++..+|.|++|.......+.
T Consensus        14 ~~~~G~i~~~el~~~l~~~g-~-------~~~~~~~~~~~~~D~~~dg~i~~~ef~~   62 (78)
T 1k9u_A           14 TNGDGKISLSELTDALRTLG-S-------TSADEVQRMMAEIDTDGDGFIDFNEFIS   62 (78)
T ss_dssp             TTCSSEECHHHHHHHHHHHH-T-------CCHHHHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHHhC-C-------CCHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence            36899999998888666554 2       2356789999999999999766655443

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=90.67  E-value=0.47  Score=29.34  Aligned_cols=53  Identities=6%  Similarity=0.010  Sum_probs=36.4

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHH---HHHHHHHcCCCccchhhHHHhh
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETK---IAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~---i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +..++ .++++.++.+++..++..+..       ..-..+   +..++..+|.|++|...+ ..+
T Consensus        20 F~~~D-~d~~G~I~~~el~~~l~~~g~-------~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~   75 (86)
T 1j7q_A           20 FDIFD-RNAENIAPVSDTMDMLTKLGQ-------TYTKRETEAIMKEARGPKGDKKNIGPE-EWL   75 (86)
T ss_dssp             HHHHS-TTTTSCBCHHHHHHHHHHTSC-------CCSHHHHHHHHHHHHCSSCSSCCBCTT-HHH
T ss_pred             HHHhC-CCCCCcCcHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHhCCCCCCcCCH-HHH
Confidence            34444 368899999988885544322       122445   889999999999987666 544

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=90.36  E-value=0.28  Score=32.55  Aligned_cols=54  Identities=9%  Similarity=0.055  Sum_probs=38.1

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+..++. ++++.++.+++..++.   ..      ..-..++.+++..+|.|++|...+..++.
T Consensus        19 ~F~~~D~-d~dG~I~~~El~~~l~---~~------~~~~~~~~~i~~~~D~d~dG~I~~~EF~~   72 (111)
T 2kgr_A           19 LFNSHDK-TMSGHLTGPQARTILM---QS------SLPQAQLASIWNLSDIDQDGKLTAEEFIL   72 (111)
T ss_dssp             HHHTTSC-SSCCEEEHHHHHHHHH---TT------CCCHHHHHHHHHHHCSSCCSEEEHHHHHH
T ss_pred             HHHHHCC-CCCCcCcHHHHHHHHH---hC------CCCHHHHHHHHHHHCCCCCCCCcHHHHHH
Confidence            3344443 6889999998888554   21      23356788999999999999877666544

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=89.96  E-value=0.33  Score=31.08  Aligned_cols=51  Identities=8%  Similarity=-0.087  Sum_probs=35.6

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +.++ .++++.++.+++..++..   . .     .-..++.+++.++|.|++|......++
T Consensus        17 ~~~D-~d~dG~I~~~el~~~l~~---~-g-----~~~~~~~~i~~~~D~d~dG~i~~~EF~   67 (95)
T 1c07_A           17 LKTD-KDMDGFVSGLEVREIFLK---T-G-----LPSTLLAHIWSLCDTKDCGKLSKDQFA   67 (95)
T ss_dssp             HHHC-TTCSSEECHHHHHHHHHT---T-T-----CCHHHHHHHHHHHCTTCSSSEETTTHH
T ss_pred             HHhC-CCCCCcEeHHHHHHHHHH---c-C-----CCHHHHHHHHHHHCCCCCCcCCHHHHH
Confidence            4444 368999999988775433   2 1     225678999999999999875554443

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=89.95  E-value=0.6  Score=29.27  Aligned_cols=60  Identities=15%  Similarity=0.108  Sum_probs=39.4

Q ss_pred             HHhhhcccCCc-ccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDC-LLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~-~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +..++..++++ .++.+++..++.. +...+.   ...-..+++.++..+|.|++|...+...+.
T Consensus        15 F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g---~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~   76 (93)
T 1k2h_A           15 FHAHSGKEGDKYKLSKKELKDLLQTELSSFLD---VQKDADAVDKIMKELDENGDGEVDFQEFVV   76 (93)
T ss_dssp             HHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHH---CCCCHHHHHHHHHHHHHCTTSCCCHHHHHH
T ss_pred             HHHHcccCCCcCccCHHHHHHHHHHHHHHHhC---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            34555236788 9999988886654 111111   123356789999999999998777665543

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=89.60  E-value=0.64  Score=29.95  Aligned_cols=55  Identities=5%  Similarity=0.035  Sum_probs=39.2

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      +.++ .++++.++.+++..++..+...       .-..++..++..+|.|++|......++..
T Consensus        31 ~~~D-~d~~G~i~~~el~~~l~~~g~~-------~~~~e~~~l~~~~d~~~~g~i~~~eF~~~   85 (105)
T 1wlz_A           31 ENFD-TMKTNTISREEFRAICNRRVQI-------LTDEQFDRLWNEMPVNAKGRLKYPDFLSR   85 (105)
T ss_dssp             HHHC-TTCSSCBCHHHHHHHHHHHTCC-------CCHHHHHHHHTTSCBCTTSCBCHHHHHHH
T ss_pred             HHHC-CCCCCcCcHHHHHHHHHHhCCC-------CCHHHHHHHHHHcCCCCCCCCcHHHHHHH
Confidence            4443 3688999999888865544322       33667899999999999987766655543

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=89.41  E-value=0.3  Score=30.24  Aligned_cols=52  Identities=12%  Similarity=0.026  Sum_probs=38.2

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .++++.++.+++..++   +....    ..-..++..++..+|.|++|.......+..+
T Consensus        34 ~d~~G~i~~~el~~~l---~~~~~----~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           34 TDNSGTITFDELKDGL---KRVGS----ELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             TTCSSCEEHHHHHHHH---HTTTS----SCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             CCCCCcCcHHHHHHHH---HHhCC----CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3688999999887744   43322    2346778999999999999987777666544

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=89.33  E-value=0.41  Score=33.09  Aligned_cols=54  Identities=20%  Similarity=0.367  Sum_probs=40.1

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +.++. +++|.++.++++.++..+...       .-..+++.++.++|.|++|.......+.
T Consensus        90 ~~~D~-d~~G~I~~~El~~~l~~~g~~-------~~~~e~~~l~~~~D~d~dG~I~~~EF~~  143 (148)
T 2lmt_A           90 KIFDR-DGDGFISPAELRFVMINLGEK-------VTDEEIDEMIREADFDGDGMINYEEFVW  143 (148)
T ss_dssp             HHHHS-SCSSEECHHHHHHHHHHHTCC-------CCHHHHHHHHHHHCCSCCSSEEHHHHHH
T ss_pred             HHHCC-CCcCcCcHHHHHHHHHHcCcc-------ccHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            44443 699999999888855544332       3467799999999999999887776653

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=89.15  E-value=0.62  Score=30.68  Aligned_cols=52  Identities=6%  Similarity=0.006  Sum_probs=37.1

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++.  +++.++.+++..++   +..-      .-++++.+++..+|.|++|......++.
T Consensus        21 F~~~D~--~dG~Is~~el~~~l---~~~g------l~~~el~~i~~~~D~d~dG~id~~EF~~   72 (106)
T 1eh2_A           21 FDSLSP--VNGFLSGDKVKPVL---LNSK------LPVDILGRVWELSDIDHDGMLDRDEFAV   72 (106)
T ss_dssp             HTTSCC--SSSCCBHHHHHHHH---HTTT------CCHHHHHHHHHHHCSSCSSBCCHHHHHH
T ss_pred             HHHhCC--CCCeEcHHHHHHHH---HHcC------CCHHHHHHHHHHHcCCCCCcCcHHHHHH
Confidence            345554  78999999877744   4331      2256799999999999999876665543

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=89.06  E-value=0.57  Score=30.86  Aligned_cols=59  Identities=10%  Similarity=0.029  Sum_probs=38.8

Q ss_pred             HHHhhhcccCC-cccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        153 WLKCIQRDVDD-CLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       153 ~~~~~~~~~~~-~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      .++.++..+++ +.++.+++..++.. +.....  +    ..++++++.++|.|++|...+..++..
T Consensus        27 aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~--~----~~ev~~li~~~D~d~dG~Idf~EF~~~   87 (106)
T 2h2k_A           27 TFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK--D----VGSLDEKMKSLDVNQDSELKFNEYWRL   87 (106)
T ss_dssp             HHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTT--T----CCCHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred             HHHHHcccCCCCCEECHHHHHHHHHHHcCcCCC--C----HHHHHHHHHHHCCCCCCCCcHHHHHHH
Confidence            44566633454 79999988885543 111111  1    256899999999999998877766543

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=88.93  E-value=0.14  Score=30.30  Aligned_cols=51  Identities=10%  Similarity=0.008  Sum_probs=36.5

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      .++++.++.+++..++   +...    ...-..++..++..+|.|++|.......+..
T Consensus        17 ~d~~G~i~~~el~~~l---~~~~----~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~   67 (71)
T 2b1u_A           17 QDGDGHITVDELRRAM---AGLG----QPLPQEELDAMIREADVDQDGRVNYEEFARM   67 (71)
T ss_dssp             CSSSSEEEHHHHHHHG---GGTT----CSSCHHHHHHHHHHCCSSSSSEEETTHHHHH
T ss_pred             CCCCCcCcHHHHHHHH---HHhC----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            3689999999877744   3332    1234667899999999999997766655443

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A

Probab=88.78  E-value=0.71  Score=29.61  Aligned_cols=52  Identities=13%  Similarity=0.107  Sum_probs=34.5

Q ss_pred             CCcccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        162 DDCLLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       162 ~~~~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++.++.+++..++... ...+.   ...-..+++.++.++|.|++|...+..++.
T Consensus        21 ~dg~Is~~El~~~l~~~~~~~lg---~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~   73 (96)
T 1a4p_A           21 DKGYLTKEDLRVLMEKEFPGFLE---NQKDPLAVDKIMKDLDQCRDGKVGFQSFFS   73 (96)
T ss_dssp             GGCSBCHHHHHHHHHHHCHHHHH---HSCCTTHHHHHHHHHCTTSSSCBCHHHHHH
T ss_pred             CCCeECHHHHHHHHHHHcccccc---cccCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            34599999888866431 11111   012245789999999999999877766553

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=88.69  E-value=0.64  Score=27.72  Aligned_cols=59  Identities=12%  Similarity=0.134  Sum_probs=39.1

Q ss_pred             HHHhhhcccCC-cccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDD-CLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~-~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+..+...+++ +.++.+++..++..+...+.     .-..++..++..+|.|++|.......+.
T Consensus        10 ~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~-----~~~~~~~~l~~~~D~~~~g~i~~~eF~~   69 (76)
T 1qx2_A           10 AFEVFAAKEGDPNQISKEELKLVMQTLGPSLL-----KGMSTLDEMIEEVDKNGDGEVSFEEFLV   69 (76)
T ss_dssp             HHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSC-----TTSCSHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             HHHHHcccCCCcCeECHHHHHHHHHHhCCCcC-----CCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            34455123567 99999988886665532220     0245688899999999998776665543

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=88.60  E-value=0.49  Score=39.40  Aligned_cols=59  Identities=10%  Similarity=0.166  Sum_probs=38.9

Q ss_pred             HHHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        151 QVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       151 ~~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      +..++.++. ++++.|+.+++..++..+..       ..-++++++|+..+|.|++|...+..++..
T Consensus       305 REaF~~fDk-DgdG~IS~eELk~aLrsLG~-------~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~l  363 (440)
T 3u0k_A          305 KEAFSLFDK-DGDGTITTKELGTVMRSLGQ-------NPTEAELQDMINEVDADGDGTIDFPEFLIM  363 (440)
T ss_dssp             HHHHHHHCT-TCSSEECHHHHHHHHHHTTC-------CCCHHHHHHHHHHHCSSCSSSEEHHHHHHH
T ss_pred             HHHHHHHcC-CCCCEECHHHHHHHHHHcCC-------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            333444444 68899999987774443321       233567888888889988887777666544

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=88.58  E-value=0.24  Score=30.29  Aligned_cols=58  Identities=12%  Similarity=0.150  Sum_probs=39.6

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      .+..++ .++++.++.+++..++   +....   ...-..++..++..+|.|++|.......+..
T Consensus        13 ~F~~~D-~d~~G~i~~~el~~~l---~~~g~---~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~   70 (81)
T 1c7v_A           13 AFKVFD-ANGDGVIDFDEFKFIM---QKVGE---EPLTDAEVEEAMKEADEDGNGVIDIPEFMDL   70 (81)
T ss_dssp             HHHHHS-CSGGGEECHHHHHHHS---STTTT---CCCCHHHHHHHHHHHCSSGGGSEEHHHHHHH
T ss_pred             HHHHHC-CCCCCcCCHHHHHHHH---HHhCC---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            344444 3688999999877744   33320   1234678899999999999998777665543

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=88.52  E-value=0.36  Score=30.69  Aligned_cols=58  Identities=17%  Similarity=0.081  Sum_probs=38.9

Q ss_pred             HHhhhcccCCc-ccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDC-LLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~-~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++..++++ .++.+++..++..... +..    .-..+++.++.++|.|++|...+...+.
T Consensus        16 F~~~D~~d~dG~~I~~~El~~~l~~~~~-~~~----~~~~~i~~~~~~~D~d~dG~I~f~EF~~   74 (92)
T 2kax_A           16 FHKYSGREGSKLTLSRKELKELIKKELC-LGE----MKESSIDDLMKSLDKNSDQEIDFKEYSV   74 (92)
T ss_dssp             HHHHHTTSSCSSEEEHHHHHHHHHHHSC-CTT----TCCTTHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred             HHHHHhhCCCCCeeCHHHHHHHHHHHcC-CCC----CCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            35555346888 9999988885543211 110    2245688999999999999877766553

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=88.34  E-value=0.45  Score=29.60  Aligned_cols=58  Identities=19%  Similarity=0.110  Sum_probs=38.0

Q ss_pred             HHhhhcccCCc-ccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        154 LKCIQRDVDDC-LLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       154 ~~~~~~~~~~~-~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +..++..++++ .++.+++..++.......    ...-..+++.++..+|.|++|...+...+
T Consensus        16 F~~~D~~d~~G~~i~~~el~~~l~~~~~~g----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~   74 (90)
T 1k8u_A           16 FHKYSGREGDKHTLSKKELKELIQKELTIG----SKLQDAEIARLMEDLDRNKDQEVNFQEYV   74 (90)
T ss_dssp             HHHHHTSSSCTTEEEHHHHHHHHHHHSCCG----GGTTSHHHHHHHHHHHHTTTCEEEHHHHH
T ss_pred             HHHHhccCCCCCcCCHHHHHHHHHHhcccC----CCCCHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            34555336888 999998888554310011    12335678999999999999876665544

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A

Probab=88.16  E-value=0.58  Score=29.78  Aligned_cols=59  Identities=12%  Similarity=0.092  Sum_probs=39.0

Q ss_pred             HHhhhcccCCc-ccCHHHHHHHHH-HHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        154 LKCIQRDVDDC-LLSKAHLEILMQ-GMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       154 ~~~~~~~~~~~-~ls~~~i~~l~~-~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +..++..++++ .++.+++..++. .+..++.   ...-..+++.++..+|.|++|...+...+
T Consensus        19 F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~---~~~~~~~~~~l~~~~D~~~dg~I~~~EF~   79 (99)
T 1qls_A           19 FQKHAGRDGNNTKISKTEFLIFMNTELAAFTQ---NQKDPGVLDRMMKKLDLDSDGQLDFQEFL   79 (99)
T ss_dssp             HHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHH---HCCCTHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHhcCCCcCeeCHHHHHHHHHHHcchhcc---ccCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            34554346888 999998888554 2322111   11234578999999999999987766554

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=86.40  E-value=1.7  Score=32.88  Aligned_cols=55  Identities=20%  Similarity=0.028  Sum_probs=33.5

Q ss_pred             ceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhccc
Q psy14555          3 VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         3 ~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      ++.+||.. ...-+.+.-|+|+|+++|.-+--..|                    ...+..+|+.+..||..|..-
T Consensus       102 ~~~~pe~~-~~~~te~~~IysLG~tLY~ALDygL~--------------------e~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A          102 PPVAGKLG-YSQCMETEVIESLGIIIYKALDYGLK--------------------ENEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             -----CCS-SSSSCHHHHHHHHHHHHHHHHTTTCC--------------------TTEEECCCHHHHHHHHHHTTC
T ss_pred             CCCChhhc-cccchHHHHHHHHHHHHHHHhhcCCC--------------------cccchhhCHHHHHHHHHHHhc
Confidence            34556544 23446778899999999998852222                    122345788888888887654

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=86.33  E-value=1.4  Score=30.36  Aligned_cols=29  Identities=7%  Similarity=0.085  Sum_probs=16.4

Q ss_pred             HHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        190 IETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       190 ~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ....+..+|..+|.|++|......+...+
T Consensus        93 ~~~~~~~~F~~~D~d~~G~i~~~El~~~l  121 (161)
T 1dtl_A           93 SEEELSDLFRMFDKNADGYIDLEELKIML  121 (161)
T ss_dssp             HHHHHHHHHHHHCTTCSSEEEHHHHGGGG
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            45555666666666666655555554444

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=86.15  E-value=0.95  Score=33.00  Aligned_cols=56  Identities=9%  Similarity=-0.025  Sum_probs=31.6

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ..++ .++++.++.+++...+..+   .    ......++..++..+|.|++|......++.++
T Consensus        64 ~~~D-~d~~G~Is~~El~~~l~~~---g----~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~  119 (197)
T 3pm8_A           64 IALD-VDNSGTLSSQEILDGLKKI---G----YQKIPPDIHQVLRDIDSNASGQIHYTDFLAAT  119 (197)
T ss_dssp             HHHC-TTCSSEECHHHHHHHHHHH---C--------CHHHHHHHHC-------CEEHHHHHHTT
T ss_pred             HHHC-CCCCCcCCHHHHHHHHHHh---C----CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            4443 3689999999888755443   1    23456778888999999988877777766554

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=86.14  E-value=1.1  Score=32.08  Aligned_cols=44  Identities=16%  Similarity=0.232  Sum_probs=21.2

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhH
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQI  211 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~  211 (222)
                      ++++.++.+++..++..+...       .-+.++.+++.++|.|++|...+
T Consensus        23 d~dG~I~~~El~~~l~~lg~~-------~~~~~~~~~~~~~d~d~~~~i~~   66 (176)
T 2lhi_A           23 DNNGSISSSELATVMRSLGLS-------PSEAEVNDLMNEIDVDGNHQIEF   66 (176)
T ss_dssp             SCSSCBCHHHHHHHHHHHTCC-------CCHHHHHHHHTTTCSSCSSSBCT
T ss_pred             CCCCCCCHHHHHHHHHHcCCC-------hhHHHHHHHHHHhCcCCCccchH
Confidence            466677777665544333211       12334445555555555544333

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=85.92  E-value=0.48  Score=30.73  Aligned_cols=60  Identities=12%  Similarity=0.162  Sum_probs=40.5

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      +.++ .++++.++.+++..++..+...    ....-.+++..++..+|.|++|.......+..+.
T Consensus        49 ~~~D-~d~~G~I~~~el~~~l~~~~~~----g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  108 (110)
T 1pva_A           49 KAID-ADASGFIEEEELKFVLKSFAAD----GRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH  108 (110)
T ss_dssp             HHHC-TTCSSSBCHHHHHTGGGGTCTT----CCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHhC-CCCCCcCcHHHHHHHHHHHhhc----CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            3444 3689999999877744333100    1123467799999999999999887777665443

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=85.87  E-value=1.4  Score=30.67  Aligned_cols=54  Identities=7%  Similarity=-0.047  Sum_probs=38.7

Q ss_pred             HHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        152 VWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       152 ~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ..++.++  +.++.++.+++..++.   .. .     .-.+++.+|+..+|.|++|......++.
T Consensus        55 ~~F~~fD--d~dG~Is~~El~~~l~---~~-g-----l~~~el~~I~~~~D~d~dG~Ld~~EF~~  108 (139)
T 2jq6_A           55 EIFYTLS--PVNGKITGANAKKEMV---KS-K-----LPNTVLGKIWKLADVDKDGLLDDEEFAL  108 (139)
T ss_dssp             HHHHHSC--CSSSEEEHHHHHHHHH---HT-T-----CCHHHHHHHHHHHCSSCCSEEEHHHHHH
T ss_pred             HHHHHhC--CCCCeECHHHHHHHHH---Hh-C-----cCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            3445666  7899999998887444   32 1     2256799999999999999866665543

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=85.83  E-value=0.69  Score=32.35  Aligned_cols=53  Identities=9%  Similarity=0.097  Sum_probs=40.3

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      .++++.++.+++..++..+..       ..-.+++..++..+|.|+.|.......+..++
T Consensus       112 ~d~~G~i~~~el~~~l~~~g~-------~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  164 (169)
T 3qrx_A          112 DDNSGTITIKDLRRVAKELGE-------NLTEEELQEMIAEADRNDDNEIDEDEFIRIMK  164 (169)
T ss_dssp             TTCSSSBCHHHHHHHHHHTTC-------CCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC
T ss_pred             CCCCCcCCHHHHHHHHHHcCC-------CCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            368999999988885554322       23467789999999999999888877766554

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=85.40  E-value=0.77  Score=31.36  Aligned_cols=50  Identities=10%  Similarity=0.090  Sum_probs=37.4

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++.++.+++..++..+..       ..-..++.+++.++|.|+.|.......+.
T Consensus        90 ~d~~G~I~~~el~~~l~~~g~-------~~~~~~~~~~~~~~D~d~dG~I~~~eF~~  139 (143)
T 2obh_A           90 DDETGKISFKNLKRVAKELGE-------NLTDEELQEMIDEADRDGDGEVSEQEFLR  139 (143)
T ss_dssp             TTCSSSBCHHHHHHHHHHTTC-------CCCHHHHHHHHHHHCTTSSSSBCHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            368999999988875543321       23467889999999999999877776654

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=85.37  E-value=1.1  Score=30.87  Aligned_cols=59  Identities=10%  Similarity=0.018  Sum_probs=40.4

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .+..++..++++.++.+++..++..+.   .    .....++..++..+|.|++|...+...+..+
T Consensus        18 ~F~~~D~~~~~G~i~~~e~~~~l~~~~---~----~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~   76 (158)
T 2jnf_A           18 AFRDFETPEGSGRVSTDQIGIILEVLG---I----QQTKSTIRQLIDEFDPFGNGDIDFDSFKIIG   76 (158)
T ss_dssp             HHHHSBCSSSCSSEEHHHHHHHHHHTT---C----SCSHHHHHHHHHHHCTTCCSEECHHHHHHHH
T ss_pred             HHHHhCCCCCCCcCcHHHHHHHHHHhC---C----CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            334445246899999998887544432   1    2335678899999999999877766665443

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=85.18  E-value=2.4  Score=30.32  Aligned_cols=62  Identities=13%  Similarity=0.160  Sum_probs=42.1

Q ss_pred             HhhhcccCCcccCHHHHHHHHH-HHHHh-hhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQ-GMRDN-IAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~-~~~~~-~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++ .++++.++.+++..++. .+... +. ........+++.++.++|.|+.|......++..+
T Consensus       105 ~~~D-~d~dG~Is~~El~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~  168 (179)
T 3a8r_A          105 DMVD-KNADGRLTAEEVKEIIALSASANKLS-KIKERADEYTALIMEELDPTNLGYIEMEDLEALL  168 (179)
T ss_dssp             HHHC-TTCSSCBCHHHHHHHHHHHHHTTHHH-HHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHH
T ss_pred             HHHC-CCCCCcCCHHHHHHHHHHHhcccccc-ccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            4443 47999999999988665 33211 10 0012367789999999999999988777766544

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=85.18  E-value=0.51  Score=32.66  Aligned_cols=57  Identities=11%  Similarity=0.137  Sum_probs=41.7

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      +.++ .++++.++.+++..++..+..       ..-..++..++..+|.|+.|.......+..++
T Consensus       103 ~~~D-~d~~G~i~~~el~~~l~~~~~-------~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  159 (161)
T 3fwb_A          103 QLFD-DDHTGKISIKNLRRVAKELGE-------TLTDEELRAMIEEFDLDGDGEINENEFIAICT  159 (161)
T ss_dssp             HHHC-TTCSSEECHHHHHHHHHHTTC-------CCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred             HHHc-CCCCCeEeHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            4443 368999999988885554432       23467899999999999999887777765544

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=85.15  E-value=1.4  Score=28.39  Aligned_cols=58  Identities=9%  Similarity=0.084  Sum_probs=39.7

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      +.++ .++++.++.+++..++..+....    ...-..++..++..+|.|++|.......+..
T Consensus        49 ~~~D-~d~~G~I~~~el~~~l~~~~~~g----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~  106 (109)
T 1bu3_A           49 FVID-QDKSGFIEEDELKLFLQVFSAGA----RALTDAETKAFLKAGDSDGDGAIGVDEWAAL  106 (109)
T ss_dssp             HHHC-TTCSSSEEHHHHHTHHHHHSTTC----CCCCHHHHHHHHHHHCTTCSSEECHHHHHHH
T ss_pred             HHHC-CCCCCcCcHHHHHHHHHHHcccC----CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            4443 36899999998888555442001    1234677899999999999998777665543

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=85.08  E-value=1.5  Score=28.24  Aligned_cols=58  Identities=9%  Similarity=0.094  Sum_probs=40.0

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      +.++ .++++.++.+++..++..+....    ...-.++++.++..+|.|++|.......+..
T Consensus        48 ~~~D-~d~~G~I~~~el~~~l~~~~~~g----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~  105 (109)
T 1rwy_A           48 HILD-KDKSGFIEEDELGSILKGFSSDA----RDLSAKETKTLMAAGDKDGDGKIGVEEFSTL  105 (109)
T ss_dssp             HHHS-TTCSSEECHHHHHTHHHHHCTTC----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred             HHHC-CCCCCeEcHHHHHHHHHHHhccC----CCCCHHHHHHHHHHHCCCCCCcCCHHHHHHH
Confidence            4444 36899999998888665552101    1233567899999999999998777666543

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A

Probab=85.07  E-value=0.92  Score=29.31  Aligned_cols=60  Identities=10%  Similarity=-0.016  Sum_probs=37.4

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHH-hhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRD-NIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~-~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++.+  ++.++.++++.++..... ++... ...-..++++++.++|.|++|...+...+.
T Consensus        16 F~~fD~~--~g~Is~~El~~~l~~~~~~~lg~~-~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~   76 (100)
T 1psr_A           16 FHKYTRR--DDKIDKPSLLTMMKENFPNFLSAC-DKKGTNYLADVFEKKDKNEDKKIDFSEFLS   76 (100)
T ss_dssp             HHHTCCT--TSCBCHHHHHHHHHHHCHHHHHHH-HHTTCCGGGTHHHHHCTTCSSCBCHHHHHH
T ss_pred             HHHHhCC--CCeECHHHHHHHHHHHhHhhhccc-cccCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            3455533  569999999886654211 11100 012234688899999999999877766653

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=84.58  E-value=0.57  Score=30.34  Aligned_cols=54  Identities=9%  Similarity=0.034  Sum_probs=38.4

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      .++++.++.+++..++..+....    ...-..++..++..+|.|++|.......+.-
T Consensus        52 ~d~~G~i~~~el~~~l~~~~~~g----~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~  105 (109)
T 5pal_A           52 KDQSGFIEEEELKGVLKGFSAHG----RDLNDTETKALLAAGDSDHDGKIGADEFAKM  105 (109)
T ss_dssp             TTCSSEECHHHHHTHHHHHCTTC----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHHHHHcC----CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            36899999998888655541101    1334677899999999999998777665543

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=84.50  E-value=1.6  Score=30.78  Aligned_cols=49  Identities=8%  Similarity=-0.026  Sum_probs=29.3

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ++++.++.+++..++...   +.   .......+..+|..+|.|++|......+.
T Consensus        59 ~~~g~i~~~EF~~~~~~~---~~---~~~~~~~~~~~F~~~D~d~~G~I~~~E~~  107 (179)
T 2f2o_A           59 DGNGTIDFPEFLTMMARK---MK---DTDSEEEIREAFRVFDKDGNGYISAAELR  107 (179)
T ss_dssp             TCSSSBCHHHHHHHHHHH---HH---HHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHH---cc---CcccHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            567777777666543322   11   12334567888888888888765554443

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=84.34  E-value=0.77  Score=29.65  Aligned_cols=58  Identities=9%  Similarity=0.056  Sum_probs=39.7

Q ss_pred             ccCCcccCHHHHHHHHHH-HHHhhhcc--h------hhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        160 DVDDCLLSKAHLEILMQG-MRDNIAEQ--Q------KSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~-~~~~~~~~--~------~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      .++++.++.+++..++.. +...+...  +      .+.....+..++..+|.|+.|.......+..
T Consensus        31 ~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~   97 (103)
T 1snl_A           31 INSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAS   97 (103)
T ss_dssp             SSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHH
Confidence            368999999988886654 21122211  1      1234456899999999999998887776654

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=84.33  E-value=3.6  Score=29.14  Aligned_cols=63  Identities=14%  Similarity=0.159  Sum_probs=41.7

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhh----cchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIA----EQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~----~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ..++ .++++.++.+++..++..+.....    .........++..++..+|.|++|.......+..+
T Consensus        47 ~~~D-~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~  113 (191)
T 3khe_A           47 RQLD-NNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVC  113 (191)
T ss_dssp             HHHC-TTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHH
T ss_pred             HHHc-CCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            4443 368999999988886655411100    00234567888999999999999887776665543

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=84.14  E-value=1.3  Score=30.06  Aligned_cols=53  Identities=9%  Similarity=0.146  Sum_probs=38.6

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .++++.++.+++..++..+..      ...-..+++.++..+|.|+.|.......+..+
T Consensus        99 ~d~~G~i~~~el~~~l~~~~~------~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  151 (153)
T 3ox6_A           99 TNGDGEISTSELREAMRALLG------HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM  151 (153)
T ss_dssp             TTCSSSBCHHHHHHHHHHHHS------SCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHT
T ss_pred             CCCCCcCcHHHHHHHHHHHhc------CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            368999999988885554211      12346778999999999999987777666543

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=84.10  E-value=1.3  Score=31.72  Aligned_cols=55  Identities=4%  Similarity=-0.090  Sum_probs=36.8

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++. ++++.++.+++..++..+..       ..-..++..++..+|.|+.|.......+.
T Consensus       119 F~~~D~-d~~G~I~~~El~~~l~~~g~-------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~  173 (195)
T 1qv0_A          119 FDIFDK-DGSGTITLDEWKAYGKISGI-------SPSQEDCEATFRHCDLDNAGDLDVDEMTR  173 (195)
T ss_dssp             HHHTC-----CEECHHHHHHHHHHHSS-------CCCHHHHHHHHHHSCCCTTSCEEHHHHHH
T ss_pred             HHHhcC-CCCCcCcHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence            344443 68999999988886654422       23366789999999999999877766554

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=83.65  E-value=1  Score=29.03  Aligned_cols=52  Identities=2%  Similarity=-0.016  Sum_probs=36.7

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +.++. ++++.++.+++..++.   .. .     .-+.++.+++..+|.|+.|......++.
T Consensus        18 ~~~D~-d~dG~Is~~el~~~l~---~~-~-----l~~~~l~~i~~~~D~d~dG~i~~~EF~~   69 (99)
T 1qjt_A           18 RQVEA-GNTGRVLALDAAAFLK---KS-G-----LPDLILGKIWDLADTDGKGVLSKQEFFV   69 (99)
T ss_dssp             HHHCC-TTSSCCCSHHHHHHHH---TS-S-----SCHHHHHHHHHHHCCSSSSSCCSHHHHH
T ss_pred             HHHCC-CCCCcCCHHHHHHHHH---Hc-C-----CCHHHHHHHHHHHCCCCCCcCCHHHHHH
Confidence            44443 6899999998877443   32 1     2266799999999999998866665543

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=83.46  E-value=1.7  Score=29.23  Aligned_cols=49  Identities=6%  Similarity=0.001  Sum_probs=27.9

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ++++.++.+++..++..   .+..   ......+..++..+|.|++|......+.
T Consensus        54 ~~~g~i~~~eF~~~~~~---~~~~---~~~~~~~~~~F~~~D~d~~G~i~~~el~  102 (142)
T 2bl0_C           54 TGNGKIQFPEFLSMMGR---RMKQ---TTSEDILRQAFRTFDPEGTGYIPKAALQ  102 (142)
T ss_dssp             TCSSEEEHHHHHHHHHH---HHTT---CCCHHHHHHHHHHTCCSSCSCEEHHHHH
T ss_pred             CCCCeeeHHHHHHHHHH---HhcC---CChHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            46667777766553332   2111   1234567777778888777765554443

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=83.27  E-value=1.8  Score=30.87  Aligned_cols=65  Identities=3%  Similarity=-0.138  Sum_probs=39.8

Q ss_pred             HHHHHhhhcccCCcccCHHHHHHHHH--HHHHhhhcc-hhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        151 QVWLKCIQRDVDDCLLSKAHLEILMQ--GMRDNIAEQ-QKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       151 ~~~~~~~~~~~~~~~ls~~~i~~l~~--~~~~~~~~~-~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ...+..++ .++++.++.+++...+.  .++...... +.+.....+..++..+|.|++|.......+.
T Consensus        23 ~~~F~~~D-~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~   90 (195)
T 1qv0_A           23 KHMFDFLD-INGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD   90 (195)
T ss_dssp             HHHHHHHC-TTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred             HHHHhHcC-CCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHH
Confidence            33344444 36899999998884221  233322211 1122344789999999999999776666554

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=83.23  E-value=2  Score=29.22  Aligned_cols=48  Identities=8%  Similarity=0.016  Sum_probs=26.4

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHh
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFA  214 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~  214 (222)
                      ++++.++.+++..++..   .+.   .......+..+|+.+|.|++|......+
T Consensus        58 ~~~g~i~~~eF~~~~~~---~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el  105 (148)
T 1exr_A           58 DGNGTIDFPEFLSLMAR---KMK---EQDSEEELIEAFKVFDRDGNGLISAAEL  105 (148)
T ss_dssp             TCSSSEEHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHSTTCSSCBCHHHH
T ss_pred             CCCCcCcHHHHHHHHHh---ccc---CCCcHHHHHHHHHHhCCCCCCcCCHHHH
Confidence            45666766765553322   211   1223456677777777777776554443

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=83.14  E-value=1.9  Score=29.60  Aligned_cols=22  Identities=18%  Similarity=0.055  Sum_probs=11.3

Q ss_pred             HHHHHHHHHHcCCCccchhhHH
Q psy14555        191 ETKIAQLKQELNFDSVAINQIH  212 (222)
Q Consensus       191 ~~~i~~l~~~ld~d~~g~~~~~  212 (222)
                      ...+..+++.+|.|++|.....
T Consensus        95 ~~~~~~~F~~~D~d~~G~i~~~  116 (161)
T 3fwb_A           95 LDEIKRAFQLFDDDHTGKISIK  116 (161)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHH
T ss_pred             HHHHHHHHHHHcCCCCCeEeHH
Confidence            3445555555555555544333

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=83.06  E-value=2.7  Score=29.69  Aligned_cols=63  Identities=8%  Similarity=0.092  Sum_probs=41.6

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhc-----chhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAE-----QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~-----~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++ .++++.++.+++..++..+...+..     .+.+...+.+..++..+|.|++|.......+..+
T Consensus        99 ~~~D-~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~  166 (183)
T 1s6c_A           99 NLYD-INKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESX  166 (183)
T ss_dssp             HHHC-TTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHT
T ss_pred             HHhC-CCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            3443 3689999999988876665322111     1112335789999999999999987777766544

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=82.92  E-value=0.95  Score=31.59  Aligned_cols=52  Identities=13%  Similarity=0.077  Sum_probs=39.5

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .++++.++.+++..++..+..       ..-..++..++..+|.|+.|......++..+
T Consensus       106 ~d~~G~I~~~el~~~l~~~g~-------~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~  157 (166)
T 2mys_B          106 PDGKGSIKKSFLEELLTTGGG-------RFTPEEIKNMWAAFPPDVAGNVDYKNICYVI  157 (166)
T ss_pred             CCCCcceeHHHHHHHHHHcCC-------CCCHHHHHHHHHhcCCCCCCeEeHHHHHHHH
Confidence            368999999988885554322       2446779999999999999988877766544

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=82.58  E-value=1.6  Score=30.33  Aligned_cols=49  Identities=8%  Similarity=-0.052  Sum_probs=26.9

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ++++.++.+++..++.....      .......+..+++.+|.|++|......+.
T Consensus        76 ~~~g~i~~~eF~~~~~~~~~------~~~~~~~~~~~F~~~D~d~~G~i~~~el~  124 (169)
T 3qrx_A           76 DGSGTIDFEEFLTMMTAKMG------ERDSREEILKAFRLFDDDNSGTITIKDLR  124 (169)
T ss_dssp             SSSSSEEHHHHHHHHHHHHH------HHHHHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHHhc------ccCcHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            45666666655553332221      12234566777777777777765555443

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=82.55  E-value=4.5  Score=29.14  Aligned_cols=62  Identities=11%  Similarity=-0.031  Sum_probs=39.8

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      +.++ .++++.++.+++..++..+.  ......+.++.-+..+++.+|.|++|......++..+.
T Consensus       121 ~~~D-~d~dG~Is~~El~~~l~~~~--g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  182 (202)
T 2bec_A          121 QLYD-LDRDGKISRHEMLQVLRLMV--GVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLE  182 (202)
T ss_dssp             HHHC-TTCSSEECHHHHHHHHHHSC--CSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTT
T ss_pred             HHhC-CCCCCeEcHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence            3443 36899999998888555441  11122334444455555569999999888887776554

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=82.36  E-value=1.2  Score=30.62  Aligned_cols=52  Identities=6%  Similarity=0.135  Sum_probs=39.0

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .++++.++.+++..++..+..       ..-..++..++..+|.|+.|.......+..+
T Consensus       102 ~d~~G~I~~~el~~~l~~~g~-------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  153 (158)
T 2jnf_A          102 KEGNGYISTDVMREILAELDE-------TLSSEDLDAMIDEIDADGSGTVDFEEFMGVM  153 (158)
T ss_dssp             SSSSSSEEHHHHHHHHHHHCT-------TCCHHHHHHHHHHHCSSCCSEECSHHHHHHT
T ss_pred             CCCCCeEcHHHHHHHHHHhCC-------cCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            368999999988886654432       2336778999999999999987776665544

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=82.15  E-value=1.5  Score=31.16  Aligned_cols=20  Identities=5%  Similarity=-0.095  Sum_probs=10.0

Q ss_pred             HHHHHHHHHcCCCccchhhH
Q psy14555        192 TKIAQLKQELNFDSVAINQI  211 (222)
Q Consensus       192 ~~i~~l~~~ld~d~~g~~~~  211 (222)
                      .++..+++.+|.|++|....
T Consensus        92 ~~~~~~f~~~D~d~~G~i~~  111 (183)
T 1s6c_A           92 EKLRWTFNLYDINKDGYINK  111 (183)
T ss_dssp             HHHHHHHHHHCTTCSSCEEH
T ss_pred             HHHHHHHHHhCCCCCCeEcH
Confidence            44555555555555554333

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=82.03  E-value=1.3  Score=31.57  Aligned_cols=51  Identities=2%  Similarity=-0.111  Sum_probs=38.2

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      .++++.++.+++..++..+..       ..-..++..++..+|.|+.|.......+..
T Consensus       120 ~d~~G~Is~~El~~~l~~~g~-------~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~  170 (191)
T 1uhk_A          120 KDQNGAITLDEWKAYTKAAGI-------IQSSEDCEETFRVCDIDESGQLDVDEMTRQ  170 (191)
T ss_dssp             TTCSSEECHHHHHHHHHHHTS-------CCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            368999999988886554422       233577899999999999998777666543

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=81.98  E-value=1.5  Score=29.87  Aligned_cols=50  Identities=14%  Similarity=0.196  Sum_probs=37.2

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++.++.+++..++..+..       ..-..++..++..+|.|+.|.......+.
T Consensus        94 ~d~~G~I~~~el~~~l~~~g~-------~~~~~~~~~~~~~~d~d~dg~i~~~eF~~  143 (148)
T 1exr_A           94 RDGNGLISAAELRHVMTNLGE-------KLTDDEVDEMIREADIDGDGHINYEEFVR  143 (148)
T ss_dssp             TTCSSCBCHHHHHHHHHHTTC-------CCCHHHHHHHHHHHCSSSSSSBCHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHhCC-------CCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            368999999988875544322       23467889999999999999877766554

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=81.93  E-value=1.2  Score=28.78  Aligned_cols=50  Identities=8%  Similarity=-0.032  Sum_probs=36.4

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++.++.+++..++..+.   .    ..-..++..++..+|.|++|......++.
T Consensus        43 ~d~~G~I~~~el~~~l~~~g---~----~~~~~~~~~l~~~~D~d~dg~i~~~eF~~   92 (107)
T 2d58_A           43 LNGNGDIDIMSLKRMLEKLG---V----PKTHLELKKLIGEVSSGSGETFSYPDFLR   92 (107)
T ss_dssp             CCTTSCEEHHHHHHHHHHTT---C----CCCHHHHHHHHHHHCSSSSSEECHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHHhC---C----CCCHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence            37899999998888554432   1    23356789999999999999776665543

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=81.67  E-value=1.9  Score=29.74  Aligned_cols=63  Identities=8%  Similarity=-0.052  Sum_probs=39.1

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhh-----hcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNI-----AEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~-----~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      ++.++ .++++.++.+++..++..+....     .....+.+..-++.++.++|.|+.|.......+..
T Consensus        74 F~~~D-~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~  141 (143)
T 3a4u_B           74 FKMHD-YDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKS  141 (143)
T ss_dssp             HHHTC-TTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC-
T ss_pred             HHHhC-CCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            34444 36889999998887555442110     11233455566688889999999998877766543

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=81.44  E-value=0.56  Score=28.15  Aligned_cols=57  Identities=19%  Similarity=0.101  Sum_probs=36.9

Q ss_pred             HHhhhcccCCc-ccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDC-LLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~-~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +..++..++++ .++.+++..++.. +...+.      -..+++.++..+|.|++|...+...+.
T Consensus        13 F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~------~~~~~~~~~~~~D~~~dg~i~~~eF~~   71 (78)
T 1cb1_A           13 FEKYAAKEGDPNQLSKEELKQLIQAEFPSLLK------GPRTLDDLFQELDKNGDGEVSFEEFQV   71 (78)
T ss_dssp             HHHHHTTSSSTTEECHHHHHHHHHHHCSSCCS------SCCCSSHHHHHTCCCSSSSEEHHHHHH
T ss_pred             HHHHhccCCCcCEeCHHHHHHHHHHHhhhhcc------cHHHHHHHHHHhcCCCCCCCcHHHHHH
Confidence            34555426788 9999988885543 211110      234578899999999999776665543

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=81.38  E-value=1.9  Score=29.95  Aligned_cols=50  Identities=6%  Similarity=-0.007  Sum_probs=34.7

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++.++.+++..++..+.   .    ..-..+++.++..+|.|++|...+...+.
T Consensus        61 ~d~~G~I~~~el~~~l~~~g---~----~~~~~e~~~l~~~~D~d~dg~I~~~eF~~  110 (150)
T 2jjz_A           61 LNNEGEIDLMSLKRMMEKLG---V----PKTHLEMKKMISEVTGGVSDTISYRDFVN  110 (150)
T ss_dssp             CCTTSSBCHHHHHHHHHHTT---C----CCCHHHHHHHHHHHHTTSCSSBCHHHHHH
T ss_pred             CCCcCcCCHHHHHHHHHHcC---C----CCCHHHHHHHHHHHCCCCCCcEeHHHHHH
Confidence            36888999998877544332   1    23356788899999999888776665543

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=81.30  E-value=1  Score=30.62  Aligned_cols=55  Identities=9%  Similarity=-0.052  Sum_probs=38.2

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +.++ .++++.++.+++..++   +....   ...-.++++.++..+|.|++|......++.
T Consensus        47 ~~~D-~d~~G~I~~~el~~~l---~~~g~---~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~  101 (135)
T 3h4s_E           47 SLLA-DPERHLITAESLRRNS---GILGI---EGMSKEDAQGMVREGDLDGDGALNQTEFCV  101 (135)
T ss_dssp             HHHS-BTTTTBBCHHHHHHHG---GGGTC---CCCCHHHHHHHHHHHCSSCSSSBCHHHHHH
T ss_pred             HHHC-CCCCCcCCHHHHHHHH---HHhCC---CCCCHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            4444 3689999999877744   33320   134467799999999999999877666554

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=81.18  E-value=1  Score=30.43  Aligned_cols=56  Identities=11%  Similarity=0.055  Sum_probs=39.8

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ++.++ .++++.++.+++..++..+..       ..-..++..++..+| |++|.......+..+
T Consensus        85 F~~~D-~d~~G~i~~~el~~~l~~~g~-------~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~  140 (142)
T 2bl0_C           85 FRTFD-PEGTGYIPKAALQDALLNLGD-------RLKPHEFAEFLGITE-TEKGQIRYDNFINTM  140 (142)
T ss_dssp             HHHTC-CSSCSCEEHHHHHHHHHHSSS-------CCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred             HHHHC-CCCCCcCcHHHHHHHHHHcCC-------CCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence            34443 368999999988885544321       234667899999999 999988777766544

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=81.16  E-value=2  Score=29.72  Aligned_cols=50  Identities=8%  Similarity=-0.023  Sum_probs=36.2

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++++.++.+++..++..+   ..    ..-..++..++..+|.|++|...+..++.
T Consensus        59 ~d~dG~I~~~El~~~l~~~---g~----~~~~~~~~~l~~~~D~d~dg~I~~~eF~~  108 (147)
T 1wy9_A           59 LNGNGDIDIMSLKRMLEKL---GV----PKTHLELKRLIREVSSGSEETFSYSDFLR  108 (147)
T ss_dssp             CCTTSSEEHHHHHHHHHHT---TC----CCCHHHHHHHHHHHCSSCTTEECHHHHHH
T ss_pred             CCCCCcCcHHHHHHHHHHh---CC----CCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            3789999999888855433   21    23456789999999999998776665543

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=81.16  E-value=1.8  Score=32.39  Aligned_cols=59  Identities=12%  Similarity=0.133  Sum_probs=40.5

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhc-----chhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAE-----QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~-----~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .++++.++.+++..++..+.+.+..     .........++.++..+|.|++|.......+..+
T Consensus       149 ~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  212 (229)
T 3dd4_A          149 INKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESC  212 (229)
T ss_dssp             TTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHH
T ss_pred             CCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence            3689999999998877766432211     0122445678999999999999987777766543

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=81.15  E-value=2  Score=30.67  Aligned_cols=54  Identities=7%  Similarity=0.033  Sum_probs=39.0

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++ .++++.++.+++..++..+.         .-..++..++..+|.|++|.......+..+
T Consensus       116 ~~~D-~d~dG~I~~~E~~~~l~~~g---------~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~  169 (191)
T 2ccm_A          116 DVND-TSGDNIIDKHEYSTVYMSYG---------IPKSDCDAAFDTLSDGGKTMVTREIFARLW  169 (191)
T ss_dssp             HHHC-TTCSSBCCHHHHHHHHHTTT---------CCHHHHHHHHHHHTTTTTSCCBHHHHHHHH
T ss_pred             HHhC-CCCCCcCcHHHHHHHHHHhC---------CCHHHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence            3433 36899999998888553331         235678899999999999987777665543

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=80.93  E-value=1.7  Score=29.22  Aligned_cols=56  Identities=11%  Similarity=0.232  Sum_probs=39.8

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++ .++++.++.+++..++..+..       ..-.+++..++..+|.|+.|.......+..+
T Consensus        83 ~~~D-~d~~G~i~~~e~~~~l~~~g~-------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  138 (145)
T 2bl0_B           83 RALD-KEGNGTIQEAELRQLLLNLGD-------ALTSSEVEELMKEVSVSGDGAINYESFVDML  138 (145)
T ss_dssp             HHHC-SSSSSEEEHHHHHHHHHHSSS-------CCCHHHHHHHHTTCCCCTTSEEEHHHHHHHH
T ss_pred             HHhC-CCCCCeEcHHHHHHHHHHcCC-------CCCHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            4443 368999999988885544321       2346778999999999999987776665443

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=80.87  E-value=1.4  Score=29.91  Aligned_cols=55  Identities=16%  Similarity=0.134  Sum_probs=38.2

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      ..++. ++++.++.+++..++..+..       .....++..++..+|.|++|.......+..
T Consensus        18 ~~~D~-d~~G~i~~~el~~~l~~~~~-------~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~   72 (153)
T 3ox6_A           18 REFDK-DKDGYINCRDLGNCMRTMGY-------MPTEMELIELSQQINMNLGGHVDFDDFVEL   72 (153)
T ss_dssp             HHHHH-HCSSSCCHHHHHHHHHHTTC-------CCCHHHHHHHHHHHHTTSTTCCCHHHHHHH
T ss_pred             HHhCC-CCCCcCcHHHHHHHHHHcCC-------CCCHHHHHHHHHHhCCCCCccCcHHHHHHH
Confidence            34443 58899999988875544321       234667889999999999987766665543

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=80.83  E-value=1.1  Score=28.85  Aligned_cols=58  Identities=5%  Similarity=0.103  Sum_probs=38.8

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++ .++++.++.+++..++   +.... .....-..++..++..+|.|++|.......+.
T Consensus        47 F~~~D-~d~~G~I~~~el~~~l---~~~~~-~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~  104 (108)
T 2pvb_A           47 FYVID-QDKSGFIEEDELKLFL---QNFSP-SARALTDAETKAFLADGDKDGDGMIGVDEFAA  104 (108)
T ss_dssp             HHHHC-TTCSSSBCHHHHHTGG---GGTCT-TSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHHC-CCCCCcCCHHHHHHHH---HHHhc-cCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            34444 3688999999777743   33310 01234467799999999999999877766554

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=80.75  E-value=5.9  Score=28.71  Aligned_cols=61  Identities=13%  Similarity=0.044  Sum_probs=40.5

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      +.++ .++++.++.+++..++..+ ...   ...+.+..-++.++..+|.|+.|.......+..+.
T Consensus       120 ~~~D-~d~dG~Is~~El~~~l~~~~g~~---~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~  181 (208)
T 2ct9_A          120 RLYD-LDKDDKISRDELLQVLRMMVGVN---ISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLE  181 (208)
T ss_dssp             HHHC-TTCSSEECHHHHHHHHHHHSCTT---CCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTT
T ss_pred             HHHC-CCCCCEEcHHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            3443 3689999999888866554 211   12233333345559999999999888877766543

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=80.63  E-value=2.1  Score=29.17  Aligned_cols=60  Identities=10%  Similarity=0.065  Sum_probs=37.9

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++ .++++.++.+++..++..+ ...+   ....+..-+..++..+|.|++|.......+..+
T Consensus        82 ~~~D-~d~~G~i~~~e~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~  142 (155)
T 3ll8_B           82 RIYD-MDKDGYISNGELFQVLKMMVGNNL---KDTQLQQIVDKTIINADKDGDGRISFEEFCAVV  142 (155)
T ss_dssp             HHHC-TTCSSCBCHHHHHHHHHHHHGGGS---CHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHhC-CCCCCcCcHHHHHHHHHHHhccCC---CHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            4443 3688999999988866653 2222   233334444555555999999987776665543

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=80.59  E-value=0.97  Score=32.71  Aligned_cols=23  Identities=9%  Similarity=-0.058  Sum_probs=12.1

Q ss_pred             HHHHHHHHHHcCCCccchhhHHH
Q psy14555        191 ETKIAQLKQELNFDSVAINQIHF  213 (222)
Q Consensus       191 ~~~i~~l~~~ld~d~~g~~~~~~  213 (222)
                      ..++..++..+|.|++|......
T Consensus        87 ~~~~~~~F~~~D~d~~G~I~~~E  109 (198)
T 2r2i_A           87 DQKLRWYFKLYDVDGNGCIDRGE  109 (198)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHH
Confidence            34555555566666555544433

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=80.37  E-value=1.9  Score=30.77  Aligned_cols=56  Identities=11%  Similarity=0.003  Sum_probs=32.0

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ..++.+..++.++.+++..++..+...      ......+..++..+|.|++|......++.
T Consensus        32 ~~~D~~~~~G~i~~~e~~~~l~~~~~~------~~~~~~~~~~f~~~D~d~~G~i~~~ef~~   87 (190)
T 2l2e_A           32 KGFFKDCPSGHLNKSEFQKIYKQFFPF------GDPSAFAEYVFNVFDADKNGYIDFKEFIC   87 (190)
T ss_dssp             HHHHHHSCCCEECHHHHHHHHHHHCCC------SCHHHHHHHHHHHHCSSSTTCEEHHHHHH
T ss_pred             HHHHHhCCCCcCCHHHHHHHHHHhCCC------CCccHHHHHHHHHhcCCCCCeEeHHHHHH
Confidence            444443367788888777744443111      11234567777777777777655554443

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=80.33  E-value=1.9  Score=28.98  Aligned_cols=50  Identities=6%  Similarity=-0.071  Sum_probs=31.6

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++++.++.+++..++......      ......+..++..+|.|++|......+..
T Consensus        59 ~~~g~i~~~ef~~~~~~~~~~------~~~~~~~~~~F~~~D~d~~G~i~~~e~~~  108 (147)
T 4ds7_A           59 DGNHAIEFSEFLALMSRQLKC------NDSEQELLEAFKVFDKNGDGLISAAELKH  108 (147)
T ss_dssp             TSSSEEEHHHHHHHHHHHHHT------HHHHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             CCCCcCcHHHHHHHHHHhccC------CCcHHHHHHHHHHhCCCCCCeECHHHHHH
Confidence            567778778666644333221      23456788888888888888765554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	222
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-22
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	8e-22
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-21
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-21
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-21
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-21
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-20
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-20
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-20
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-19
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-19
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-19
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-18
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-18
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-17
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-17
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-17
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-17
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-16
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-16
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-16
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-16
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-16
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-15
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-15
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-15
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-15
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-14
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-14
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-14
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-14
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-14
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-14
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-14
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-14
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-14
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-14
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-14
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-14
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-13
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-13
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-13
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-13
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-12
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-11
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-10

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.4 bits (224), Expect = 1e-22
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 11  VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
               Y    D+++ G  ++EMAT + P+ E  +      RV               + K+
Sbjct: 185 YEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 244

Query: 71  FILRCFEKDPDKRATAGELLEDPFL 95
            I  C  ++ D+R +  +LL   F 
Sbjct: 245 IIEGCIRQNKDERYSIKDLLNHAFF 269

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 3e-22
 Identities = 29/84 (34%), Positives = 44/84 (52%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
             +Y P+ DIWSLG   +EM  G+PP++     +A            + P +LS   + F
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF 249

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           + RC + D +KR +A ELL+  FL
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFL 273

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 8e-22
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
             SY+ ++DIWSLGC + E+    PPF      Q  L           IP   SD+  + 
Sbjct: 188 RMSYNEKSDIWSLGCLLYELCALMPPFT--AFSQKELAGKIREGKFRRIPYRYSDELNEI 245

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           I R        R +  E+LE+P +
Sbjct: 246 ITRMLNLKDYHRPSVEEILENPLI 269

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (219), Expect = 1e-21
 Identities = 31/92 (33%), Positives = 48/92 (52%)

Query: 4   IFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE 63
           + + + S +  Y  +AD+WSLG T++EMA  +PP  EL   +  L            P+ 
Sbjct: 181 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 240

Query: 64  LSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
            S   K F+ +C EK+ D R T  +LL+ PF+
Sbjct: 241 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 272

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.4 bits (216), Expect = 3e-21
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAK 69
              YS   D WS+G     +  G PPF +  +      ++    ++       ++SD AK
Sbjct: 183 QKPYSKAVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEYEFDSPYWDDISDSAK 241

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
            FI    EKDP+KR T  + L+ P++A  TA   +    +S ++  N
Sbjct: 242 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKN 288

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 6e-21
 Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 3/103 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAK 69
                 +AD+WS+G     + +G  PF+   + Q  L  V    ++   E  +  S  AK
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANVSAVNYEFEDEYFSNTSALAK 248

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPE 112
            FI R   KDP KR T  + L+ P++      ++ SS    P+
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 291

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (211), Expect = 9e-21
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              +  + D+WSLG    E   GKPPF E  + Q    R+   ++    P  +++ A+  
Sbjct: 178 GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRI--SRVEFTFPDFVTEGARDL 234

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           I R  + +P +R    E+LE P++
Sbjct: 235 ISRLLKHNPSQRPMLREVLEHPWI 258

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 1e-20
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAK 69
           +   S   D+WSLG  +  + +G  PF+   + Q  +  +    +    E   E+S +A 
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLA-ETNQQIIENIMNAEYTFDEEAFKEISIEAM 235

Query: 70  QFILRCFEKDPDKRATAGELLEDPFL 95
            F+ R   K+   R TA E L+ P+L
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWL 261

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.3 bits (208), Expect = 5e-20
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              Y  + D+WSLG T +E+A  KPP   + +  +ALY +  ++         S+  + F
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPALQSGHWSEYFRNF 246

Query: 72  ILRCFEKDPDKRATAGELLEDPFL 95
           +  C +K P  R T+  LL+  F+
Sbjct: 247 VDSCLQKIPQDRPTSEVLLKHRFV 270

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 83.2 bits (205), Expect = 8e-20
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELS 65
               +  Y  + D+WS G  +  +  G PPF         L  +  G ++       + S
Sbjct: 185 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-RKQMLMLRMIMSGNYQFGSPEWDDYS 243

Query: 66  DKAKQFILRCFEKDPDKRATAGELLEDPFL 95
           D  K  + R     P KR TA E L  PF 
Sbjct: 244 DTVKDLVSRFLVVQPQKRYTAEEALAHPFF 273

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 83.2 bits (205), Expect = 2e-19
 Identities = 28/139 (20%), Positives = 42/139 (30%), Gaps = 6/139 (4%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAK 69
                   D+WS+G     + +G  PF    +    L  V      M     + +S+  K
Sbjct: 199 GKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGK 257

Query: 70  QFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCK 129
            FI +    DP+ R T  + LE P+L    A    S     P              Y   
Sbjct: 258 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQ---IPSSRYTKIRDSIKTKYDAW 314

Query: 130 KDSQRRITLSGVLDQDRDH 148
            +    +         R H
Sbjct: 315 PEPLPPLGRISNYSSLRKH 333

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 4e-19
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
             S    +D+W+LGC I ++  G PPF   G+      ++   K+  + P +   KA+  
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLIFQKI--IKLEYDFPEKFFPKARDL 240

Query: 72  ILRCFEKDPDKRATAGE------LLEDPFLADL 98
           + +    D  KR    E      L   PF   +
Sbjct: 241 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 4e-19
 Identities = 18/87 (20%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---EIPAEL 64
           +    + YS Q+D+++ G  + E+ TG+ P+  + +    ++ VG   + P   ++ +  
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238

Query: 65  SDKAKQFILRCFEKDPDKRATAGELLE 91
               K+ +  C +K  D+R    ++L 
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILA 265

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 6e-19
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              Y+   D WS G  + EM  G+ PF   G  +  L+       +P  P  L  +AK  
Sbjct: 177 GQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHS-IRMDNPFYPRWLEKEAKDL 233

Query: 72  ILRCFEKDPDKRATA-GELLEDPFLADL 98
           +++ F ++P+KR    G++ + P   ++
Sbjct: 234 LVKLFVREPEKRLGVRGDIRQHPLFREI 261

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (198), Expect = 6e-19
 Identities = 12/81 (14%), Positives = 30/81 (37%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           ++   D+WS G  +  M  G+ P+ +              K +     ++       + +
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 242

Query: 75  CFEKDPDKRATAGELLEDPFL 95
              ++P  R T  ++ +D + 
Sbjct: 243 ILVENPSARITIPDIKKDRWY 263

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 80.9 bits (199), Expect = 1e-18
 Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 7/136 (5%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIPAELSDKAKQFI 72
                D+W++G     + +G  PF         L  V     +   +  + +S +AK FI
Sbjct: 205 VGFYTDMWAIGVLGYVLLSGLSPFAG-EDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 263

Query: 73  LRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLNSKSPEQDRFYLCKKDS 132
               +K+P KR T  + LE P+L    +  +S      P    N    +    Y      
Sbjct: 264 KNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSR----IPSSRYNKIRQKIKEKYADWPAP 319

Query: 133 QRRITLSGVLDQDRDH 148
           Q  I         R H
Sbjct: 320 QPAIGRIANFSSLRKH 335

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 2e-18
 Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA-ALYRVGFHKMHPEIPAELSDKAKQ 70
           +S +    D WSLG  + E+ TG  PF   G   + A       K  P  P E+S  AK 
Sbjct: 206 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKD 265

Query: 71  FILRCFEKDPDKR-----ATAGELLEDPFLADL 98
            I R   KDP KR       A E+ E  F   +
Sbjct: 266 LIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 7e-18
 Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           + ++   ++ ++D+WS G  + E+ T           +  L +V         P E  + 
Sbjct: 184 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPES 242

Query: 68  AKQFILRCFEKDPDKRATAGEL---LEDPF 94
               + +C+ K+P++R T   L   LED F
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF 272

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
               +  +   A +WSLG  + +M  G  PF                +        +S +
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII---------RGQVFFRQRVSSE 230

Query: 68  AKQFILRCFEKDPDKRATAGELLEDPFLADLTATRSSSSGLLSPEVNLN 116
            +  I  C    P  R T  E+   P++ D+   +       + E++L+
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQE------TAEIHLH 273

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 2e-17
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
             ++S  +D W  G T+ EM T G+ P+I L +    L+++         P +       
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDKEGERLPRPEDCPQDIYN 246

Query: 71  FILRCFEKDPDKRATAGELLE 91
            +++C+   P+ R T   L +
Sbjct: 247 VMVQCWAHKPEDRPTFVALRD 267

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 3e-17
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF-----IELGSPQAALYRVGFHKMHPEIPAELSD 66
              Y    D+WSLG  +  +  G PPF     + +        R+G ++      +E+S+
Sbjct: 187 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 246

Query: 67  KAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
           + K  I    + +P +R T  E +  P++   T
Sbjct: 247 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 279

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.1 bits (189), Expect = 3e-17
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 5/96 (5%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
                 +Y   AD +SLGC + ++  G  PF +  +            M  E+P   S +
Sbjct: 176 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 235

Query: 68  AKQFILRCFEKDPDKRAT-----AGELLEDPFLADL 98
            +  +    ++D ++R       A E+ E PF   L
Sbjct: 236 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 5e-17
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 8/92 (8%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           ++ Y    D W LG  + EM  G+ PF      +     +         P  LS +AK  
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELI--LMEEIRFPRTLSPEAKSL 235

Query: 72  ILRCFEKDPDKR-----ATAGELLEDPFLADL 98
           +    +KDP +R     + A E++E  F   +
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.2 bits (184), Expect = 5e-17
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELS 65
           + +   S   ++D++SLGC + E+ TG+PPF    SP +  Y+       P       LS
Sbjct: 184 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVREDPIPPSARHEGLS 242

Query: 66  DKAKQFILRCFEKDPDKR-ATAGELLED 92
                 +L+   K+P+ R  TA E+  D
Sbjct: 243 ADLDAVVLKALAKNPENRYQTAAEMRAD 270

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.0 bits (181), Expect = 2e-16
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 8/89 (8%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y+   D WS G  I EM  G  PF +  +      ++         P   ++  K  + R
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTYEKI--LNAELRFPPFFNEDVKDLLSR 234

Query: 75  CFEKDPDKR-----ATAGELLEDPFLADL 98
              +D  +R         ++   P+  ++
Sbjct: 235 LITRDLSQRLGNLQNGTEDVKNHPWFKEV 263

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (180), Expect = 3e-16
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 24/115 (20%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPF--------------------IELGSPQAA 47
           +  + SSY+   D+WS+GC   EM   KP F                     E      A
Sbjct: 185 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244

Query: 48  LYRVGFHKMHP----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
           L R  FH        +   ++ +  K  +L+C   +P KR +A   L  P+  DL
Sbjct: 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 3e-16
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 15  YSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFIL 73
           Y+ Q+D+WS G  + E+ T G  P+   G P   L+++       + P+  +++    + 
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 271

Query: 74  RCFEKDPDKRATAGELLED 92
            C+   P +R T  +L+ED
Sbjct: 272 DCWHAVPSQRPTFKQLVED 290

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 4e-16
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 1/80 (1%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
              +S ++D+WS G  + E+ +           +  + RV       + P        + 
Sbjct: 174 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVYEV 232

Query: 72  ILRCFEKDPDKRATAGELLE 91
           +  C+  D   R +  +L E
Sbjct: 233 MKNCWHLDAAMRPSFLQLRE 252

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 6e-16
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 1/84 (1%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           +    S YS ++D+WS G  + E+ +      E  S    +  +         P   S  
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTH 230

Query: 68  AKQFILRCFEKDPDKRATAGELLE 91
             Q +  C+++ P+ R     LL 
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLR 254

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 7e-16
 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           +     +++ ++D+WS G  + E+ T         +    +  +         P    ++
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEE 238

Query: 68  AKQFILRCFEKDPDKRATAGEL---LEDPFLA 96
             Q +  C+++ P+ R T   L   LED F A
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 2e-15
 Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 1/84 (1%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           +      ++ ++D+WS G  + E+ T   P     +       +         P    D 
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDP 262

Query: 68  AKQFILRCFEKDPDKRATAGELLE 91
             + +L+C+    + R +  EL+ 
Sbjct: 263 LYEVMLKCWHPKAEMRPSFSELVS 286

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 3e-15
 Identities = 24/110 (21%), Positives = 34/110 (30%), Gaps = 26/110 (23%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF-----------------------IELGSPQAALYRV 51
           Y+   D+WS GC + E+  G+P F                       I   +P    ++ 
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 259

Query: 52  GFHKMHP---EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
              K HP           +A     R  E  P  R T  E     F  +L
Sbjct: 260 PQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 4e-15
 Identities = 17/116 (14%), Positives = 31/116 (26%), Gaps = 25/116 (21%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPF-------------------------IELG 42
                  Y    D+W++GC + E+    P                               
Sbjct: 171 LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 230

Query: 43  SPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
            P    ++         I +   D     I   F  +P  R TA + L+  + ++ 
Sbjct: 231 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 286

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 5e-15
 Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 41/143 (28%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF------------------------IELGSPQAALYR 50
           YS Q+DIWS+G ++VEMA G+ P                             +P   L  
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 239

Query: 51  VGFHKMHPEIPAEL-----------------SDKAKQFILRCFEKDPDKRATAGELLEDP 93
            G     P    EL                 S + + F+ +C  K+P +RA   +L+   
Sbjct: 240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299

Query: 94  FLADLTATRSSSSGLLSPEVNLN 116
           F+    A     +G L   + LN
Sbjct: 300 FIKRSDAEEVDFAGWLCSTIGLN 322

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.4 bits (169), Expect = 7e-15
 Identities = 16/84 (19%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           +    + +S ++D+W+ G  + E+AT        G   + +Y +       E P    +K
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRMERPEGCPEK 244

Query: 68  AKQFILRCFEKDPDKRATAGELLE 91
             + +  C++ +P  R +  E+ +
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIHQ 268

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.0 bits (168), Expect = 1e-14
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 6/90 (6%)

Query: 9   YSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
                 +S ++D+WS G  + E  + G+ P+   G   + +  +         PA    +
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPY--RGMKGSEVTAMLEKGERMGCPAGCPRE 238

Query: 68  AKQFILRCFEKDPDKRATAGEL---LEDPF 94
               +  C+  D + R     +   L + +
Sbjct: 239 MYDLMNLCWTYDVENRPGFAAVELRLRNYY 268

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 1e-14
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 9   YSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
             + S +S ++DIW+ G  + E+ + GK P+    +       +    +    P   S+K
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF-TNSETAEHIA-QGLRLYRPHLASEK 229

Query: 68  AKQFILRCFEKDPDKRATAGELLED 92
               +  C+ +  D+R T   LL +
Sbjct: 230 VYTIMYSCWHEKADERPTFKILLSN 254

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 1e-14
 Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 27/111 (24%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP---------------- 58
           YS   D+WS GC   E+A    P          L R+      P                
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238

Query: 59  -----------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
                       +  +L+   +  +    + +P +R +A E L+ P+ +D 
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 2e-14
 Identities = 27/118 (22%), Positives = 40/118 (33%), Gaps = 26/118 (22%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPF-------------IELGSPQAALYRVGFH 54
                  YS   DIWSLGC   EM T +  F               LG+P   ++     
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232

Query: 55  KMH-------------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT 99
                            ++   L +  +  + +    DP+KR +A   L  PF  D+T
Sbjct: 233 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 2e-14
 Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           +  ++  Y+ Q+D+WS G T+ E+ T      + G P + +  +         P   +  
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPPICTID 241

Query: 68  AKQFILRCFEKDPDKRATAGELLED 92
               +++C+  D D R    EL+ +
Sbjct: 242 VYMIMVKCWMIDADSRPKFRELIIE 266

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 2e-14
 Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           +   +  ++  +D+WS G  + E+AT      +  S +  L  V       + P    D 
Sbjct: 205 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-MEGGLLDKPDNCPDM 263

Query: 68  AKQFILRCFEKDPDKRATAGELLE 91
             + +  C++ +P  R +  E++ 
Sbjct: 264 LFELMRMCWQYNPKMRPSFLEIIS 287

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.7 bits (167), Expect = 2e-14
 Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 8/88 (9%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y+   D W+LG  I EMA G PPF         +Y           P+  S   K  +  
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFF--ADQPIQIYEK-IVSGKVRFPSHFSSDLKDLLRN 271

Query: 75  CFEKDPDKR-----ATAGELLEDPFLAD 97
             + D  KR         ++    + A 
Sbjct: 272 LLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.3 bits (166), Expect = 2e-14
 Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           Y+ ++D+W+ G  + E+ +         + +  +Y V         P     +    +  
Sbjct: 219 YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR-DGNILACPENCPLELYNLMRL 277

Query: 75  CFEKDPDKRATAGELLE 91
           C+ K P  R +   +  
Sbjct: 278 CWSKLPADRPSFCSIHR 294

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 2e-14
 Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 12  NSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQ 70
              Y+ ++D+WS G  + E+ + G  P+  +    A  Y++  +    + P   +++   
Sbjct: 240 EGIYTIKSDVWSYGILLWEIFSLGVNPYPGI-PVDANFYKLIQNGFKMDQPFYATEEIYI 298

Query: 71  FILRCFEKDPDKRATAGELLE 91
            +  C+  D  KR +   L  
Sbjct: 299 IMQSCWAFDSRKRPSFPNLTS 319

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 4e-14
 Identities = 11/77 (14%), Positives = 31/77 (40%), Gaps = 1/77 (1%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           ++  +D+WS G  + E+ T         S    +  +         P +      Q +++
Sbjct: 190 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMDCPSAIYQLMMQ 248

Query: 75  CFEKDPDKRATAGELLE 91
           C++++  +R    +++ 
Sbjct: 249 CWQQERARRPKFADIVS 265

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 4e-14
 Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILR 74
           ++  +D+W  G  + E+        +       + R+  +     +P          + +
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPPNCPPTLYSLMTK 244

Query: 75  CFEKDPDKRATAGELLED 92
           C+  DP +R    EL   
Sbjct: 245 CWAYDPSRRPRFTELKAQ 262

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 67.2 bits (163), Expect = 4e-14
 Identities = 27/116 (23%), Positives = 40/116 (34%), Gaps = 26/116 (22%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIE-------------LGSP---------Q 45
               +  YS   DIWS+GC   EM  G P F               LG+P         +
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230

Query: 46  AALYRVGFHKMHP----EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD 97
              Y   F    P         L +     + +  + DP++R TA + LE  +  +
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.1 bits (163), Expect = 6e-14
 Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSD 66
           +      ++  +D+WS G  + E+ + G+ P+ ++ + Q  +  +         P +   
Sbjct: 203 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-TNQDVINAIE-QDYRLPPPMDCPS 260

Query: 67  KAKQFILRCFEKDPDKRATAGELLE 91
              Q +L C++KD + R   G+++ 
Sbjct: 261 ALHQLMLDCWQKDRNHRPKFGQIVN 285

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 8e-14
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 3/86 (3%)

Query: 7   TQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELS 65
            +    S Y+  +D+WS G  + E+ + G  P+   G   A LY         E P    
Sbjct: 195 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC--GMTCAELYEKLPQGYRLEKPLNCD 252

Query: 66  DKAKQFILRCFEKDPDKRATAGELLE 91
           D+    + +C+ + P +R +  ++L 
Sbjct: 253 DEVYDLMRQCWREKPYERPSFAQILV 278

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 1e-13
 Identities = 15/100 (15%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSD 66
           +      +S ++D+WS G T+ E  + G+ P+ ++  P+  +          E P E   
Sbjct: 182 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKRMECPPECPP 239

Query: 67  KAKQFILRCFEKDPDKRATAGEL---LEDPFLADLTATRS 103
           +    +  C+    + R     +   +   + +  +    
Sbjct: 240 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 279

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.0 bits (160), Expect = 1e-13
 Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 8/91 (8%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAE-----LSD 66
               S + D+ SLG  ++    G  P+  L +           +     P E        
Sbjct: 187 GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPS 246

Query: 67  KAKQFILRCFEKDPDKRATAG---ELLEDPF 94
           +   ++  C     D +       +L  + F
Sbjct: 247 EFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 15/84 (17%), Positives = 34/84 (40%)

Query: 8   QYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDK 67
           +   N  Y+ ++D+WS G  + E+ +            +  Y++         P     +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAE 276

Query: 68  AKQFILRCFEKDPDKRATAGELLE 91
               +  C++ DP KR T  ++++
Sbjct: 277 MYDIMKTCWDADPLKRPTFKQIVQ 300

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 3e-13
 Identities = 18/80 (22%), Positives = 32/80 (40%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQF 71
           +  Y+ Q+D+WS G  + E+ +                R          P   + +  Q 
Sbjct: 210 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 269

Query: 72  ILRCFEKDPDKRATAGELLE 91
           +L C+  +P +R T  EL+E
Sbjct: 270 MLDCWHGEPSQRPTFSELVE 289

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 6e-13
 Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 29/139 (20%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF--------------------IELGSPQAALYRVGFH 54
           Y+   DIWS+GC + E+ TG+  F                     EL    ++     + 
Sbjct: 196 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI 255

Query: 55  KMHPEIPA--------ELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL-TATRSSS 105
           +   ++P           +  A   + +    D DKR TA + L   + A          
Sbjct: 256 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 315

Query: 106 SGLLSPEVNLNSKSPEQDR 124
           +              ++ +
Sbjct: 316 ADPYDQSFESRDLLIDEWK 334

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 9e-13
 Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 28/112 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFI------------------------ELGSPQAALYR 50
           Y+   DIWS+GC + EM TGK  F                          L S +A  Y 
Sbjct: 196 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM 255

Query: 51  VGFHKMH----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
            G  ++       I    S  A   + +    D ++R TAGE L  P+   L
Sbjct: 256 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 307

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 63.7 bits (154), Expect = 1e-12
 Identities = 25/119 (21%), Positives = 36/119 (30%), Gaps = 35/119 (29%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--------------------- 53
           Y    D+WSLGC +  M   K PF         L R+                       
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266

Query: 54  --------------HKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
                           +H E    +S +A  F+ +    D   R TA E +E P+   +
Sbjct: 267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 5e-12
 Identities = 18/113 (15%), Positives = 31/113 (27%), Gaps = 29/113 (25%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPF--------------IELGSPQAALYRVGFHKMH 57
              Y P  D+W  GC + EM T  P                +           V  ++++
Sbjct: 196 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 255

Query: 58  PEI---------------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFL 95
            ++                      A   I +    DP +R  + + L   F 
Sbjct: 256 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 308

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.4 bits (145), Expect = 1e-11
 Identities = 28/131 (21%), Positives = 41/131 (31%), Gaps = 45/131 (34%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFIE-------------------LGSPQAALYRVG 52
            + +   ADIWS  C I E+ TG   F                     LG   + L R G
Sbjct: 203 GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNG 262

Query: 53  FHKM--------------------------HPEIPAELSDKAKQFILRCFEKDPDKRATA 86
            +                              +   + + +   F+    + DP KRA A
Sbjct: 263 KYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 322

Query: 87  GELLEDPFLAD 97
           G L+  P+L D
Sbjct: 323 GGLVNHPWLKD 333

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 2e-11
 Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 28/112 (25%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPFIE-------------LGSPQAALYRVGFHKMH---- 57
           Y+   DIWS+GC + EM + +P F               LGSP         +       
Sbjct: 190 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 249

Query: 58  -----------PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL 98
                        +      KA   + +    +P KR    + L  P+L   
Sbjct: 250 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 59.1 bits (142), Expect = 3e-11
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 15  YSPQADIWSLGCTIVEMATGKPPF--IELGSPQAALYRVGFHKMHP---EIPAELSDKAK 69
            S + D+ +LG   +    G  P+  ++  + +    R+G  K      E+ A   ++  
Sbjct: 190 QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFY 249

Query: 70  QFILRCFEKDPDKRATAGELLE 91
           +++        D       L  
Sbjct: 250 KYMHYARNLAFDATPDYDYLQG 271

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 4e-11
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 19/108 (17%)

Query: 3   VIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY------------- 49
           V+  +    +     +ADI+++G    E+A            Q   Y             
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242

Query: 50  -RVGFHKMHPEIP-----AELSDKAKQFILRCFEKDPDKRATAGELLE 91
             V   K+ P IP      E      + +  C+  +   R TA  + +
Sbjct: 243 KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 6e-10
 Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 39/126 (30%)

Query: 12  NSSYSPQADIWSLGCTIVEMATGKPPFI-------------ELGSPQAA----------- 47
              Y    DIWS+GC + EM   K  F              +LG+P              
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251

Query: 48  ---------------LYRVGFHKMHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLED 92
                          L+         E     + +A+  + +    DP KR +  + L+ 
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311

Query: 93  PFLADL 98
           P++   
Sbjct: 312 PYINVW 317

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	222
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.89
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.89
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.89
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.89
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.89
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.88
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.88
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.88
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.88
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.88
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.88
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.88
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.87
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.86
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.86
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.86
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.85
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.84
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.84
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.83
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.82
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.82
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.82
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.81
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.81
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.81
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.8
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.8
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.8
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.79
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.79
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.79
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.79
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.79
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.79
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.79
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.78
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.78
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.78
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.78
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.78
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.77
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.77
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.77
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.77
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.77
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.76
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.76
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.76
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.75
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.75
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.75
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.72
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.72
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.72
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.67
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.6
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.58
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	96.11
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	95.63
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	95.38
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	95.29
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	95.22
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	95.16
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	95.08
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	94.92
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	94.85
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	94.84
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	94.53
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	94.41
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	94.2
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	93.99
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	93.92
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	93.88
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	93.87
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	93.73
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	93.63
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	93.46
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	93.44
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	93.42
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	93.35
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	93.07
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	93.04
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	92.78
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	92.77
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	92.64
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	92.44
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	92.43
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	92.01
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	91.84
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	91.39
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	91.09
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	90.37
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	90.29
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	90.11
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	89.72
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	89.57
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	88.75
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	88.44
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	88.29
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	87.62
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	86.95
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	86.76
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	85.72
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	85.63
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	85.5
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	83.85
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	83.82
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	81.87
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	81.73
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	80.97
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	80.92
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	80.81

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-24  Score=169.48  Aligned_cols=94  Identities=21%  Similarity=0.382  Sum_probs=76.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhcc-CCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHK-MHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+ .|+.++||||+||++|||++|+.||.+.... ..+....... .+...+...++++++|+.+||..+
T Consensus       176 T~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~d  253 (270)
T d1t4ha_         176 TPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN  253 (270)
T ss_dssp             SCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSS
T ss_pred             CccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccH-HHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCC
Confidence            789999998765 6999999999999999999999999754333 3333332222 223345667899999999999999


Q ss_pred             CCCCCChhhhhcCcccc
Q psy14555         80 PDKRATAGELLEDPFLA   96 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~   96 (222)
                      |.+|||++++++||||+
T Consensus       254 p~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         254 KDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             GGGSCCHHHHHTSGGGC
T ss_pred             HhHCcCHHHHhCCcccC
Confidence            99999999999999995

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.6e-24  Score=171.17  Aligned_cols=96  Identities=33%  Similarity=0.613  Sum_probs=80.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|.+||... .......... ........|..++..+++||.+||..|
T Consensus       179 t~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  257 (293)
T d1yhwa1         179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMD  257 (293)
T ss_dssp             CGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSS
T ss_pred             CCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCC-CHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            78999999999999999999999999999999999999753 2223333222 223334556788999999999999999


Q ss_pred             CCCCCChhhhhcCccccc
Q psy14555         80 PDKRATAGELLEDPFLAD   97 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~   97 (222)
                      |.+|||+.++++||||+.
T Consensus       258 P~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         258 VEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             TTTSCCHHHHTTCGGGGG
T ss_pred             hhHCcCHHHHhcCHhhCC
Confidence            999999999999999974

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.6e-24  Score=169.30  Aligned_cols=93  Identities=28%  Similarity=0.461  Sum_probs=79.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|.+||.+.  ....+............|..+++++.+|+.+||..||
T Consensus       177 t~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp  254 (269)
T d2java1         177 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKD  254 (269)
T ss_dssp             CCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCC--CHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCh
Confidence            78899999999999999999999999999999999999743  3333333333344455677899999999999999999


Q ss_pred             CCCCChhhhhcCccc
Q psy14555         81 DKRATAGELLEDPFL   95 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~   95 (222)
                      .+|||++++++|||+
T Consensus       255 ~~Rps~~ell~hp~i  269 (269)
T d2java1         255 YHRPSVEEILENPLI  269 (269)
T ss_dssp             GGSCCHHHHHTSTTC
T ss_pred             hHCcCHHHHHhCCcC
Confidence            999999999999996

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=3.9e-24  Score=175.12  Aligned_cols=111  Identities=21%  Similarity=0.328  Sum_probs=87.3

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.. ..|+.++||||+||++|||++|++||......................|..+++++++||.+||..|
T Consensus       168 T~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  247 (364)
T d1omwa3         168 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD  247 (364)
T ss_dssp             CGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSS
T ss_pred             ccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccC
Confidence            789999998864 5799999999999999999999999975433222222223344555667789999999999999999


Q ss_pred             CCCCCC-----hhhhhcCccccccccccCCCCCCCCC
Q psy14555         80 PDKRAT-----AGELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        80 p~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      |.+||+     ++++++||||++..|.........+|
T Consensus       248 P~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p  284 (364)
T d1omwa3         248 VNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPP  284 (364)
T ss_dssp             TTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred             HHHhCCCcccCHHHHHcCccccCCCHHHHhcCCCCcC
Confidence            999999     69999999999887665444433333

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-24  Score=170.25  Aligned_cols=95  Identities=23%  Similarity=0.423  Sum_probs=79.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|++||.+  .......... ....+..|..+++++++|+.+||..||
T Consensus       167 t~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~--~~~~~~~~~i-~~~~~~~p~~~s~~~~~li~~~L~~dp  243 (263)
T d2j4za1         167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRI-SRVEFTFPDFVTEGARDLISRLLKHNP  243 (263)
T ss_dssp             EGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHH-HTTCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCC--CCHHHHHHHH-HcCCCCCCccCCHHHHHHHHHHccCCH
Confidence            6899999999999999999999999999999999999974  2333333222 233445677889999999999999999


Q ss_pred             CCCCChhhhhcCcccccc
Q psy14555         81 DKRATAGELLEDPFLADL   98 (222)
Q Consensus        81 ~~R~s~~~~l~h~~~~~~   98 (222)
                      .+|||++++++||||+..
T Consensus       244 ~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         244 SQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             GGSCCHHHHHTCHHHHHH
T ss_pred             hHCcCHHHHHcCcCcCCc
Confidence            999999999999999753

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.9e-24  Score=168.41  Aligned_cols=97  Identities=12%  Similarity=0.204  Sum_probs=78.8

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+..| +.++||||+||++|||++|++||......................+..++.++.+|+.+||..|
T Consensus       168 T~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~d  247 (271)
T d1nvra_         168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVEN  247 (271)
T ss_dssp             CGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSS
T ss_pred             CcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCC
Confidence            789999999988876 5789999999999999999999975433333333333333334445678999999999999999


Q ss_pred             CCCCCChhhhhcCccccc
Q psy14555         80 PDKRATAGELLEDPFLAD   97 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~   97 (222)
                      |.+|||++++++||||+.
T Consensus       248 P~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         248 PSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             TTTSCCHHHHTTCTTTTC
T ss_pred             hhHCcCHHHHhcCHhhCc
Confidence            999999999999999974

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-23  Score=169.65  Aligned_cols=108  Identities=25%  Similarity=0.440  Sum_probs=86.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|++||.+.  ....+..... ......|..+|+++++||.+||++||
T Consensus       168 T~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~dli~~~L~~dP  244 (337)
T d1o6la_         168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELIL-MEEIRFPRTLSPEAKSLLAGLLKKDP  244 (337)
T ss_dssp             CGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSST
T ss_pred             CHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCc--CHHHHHHHHh-cCCCCCCccCCHHHHHHHHhhccCCc
Confidence            78999999999999999999999999999999999999753  3333333322 23356678899999999999999999


Q ss_pred             CCCCC-----hhhhhcCccccccccccCCCCCCCCC
Q psy14555         81 DKRAT-----AGELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        81 ~~R~s-----~~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      .+|++     ++++++||||++..|.........+|
T Consensus       245 ~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p  280 (337)
T d1o6la_         245 KQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPP  280 (337)
T ss_dssp             TTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred             hhhcccccccHHHHHcCcccccCCHHHHHhCCCCCC
Confidence            99994     89999999999877665444433333

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7e-24  Score=168.36  Aligned_cols=100  Identities=23%  Similarity=0.442  Sum_probs=82.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|.+||..  ........... ......|..+++++++||.+||..||
T Consensus       173 T~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~--~~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~~L~~dP  249 (288)
T d1uu3a_         173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKII-KLEYDFPEKFFPKARDLVEKLLVLDA  249 (288)
T ss_dssp             CGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHH-TTCCCCCTTCCHHHHHHHHTTSCSSG
T ss_pred             CccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCC--cCHHHHHHHHH-cCCCCCCccCCHHHHHHHHHHccCCH
Confidence            7899999999999999999999999999999999999974  23333332222 23345677899999999999999999


Q ss_pred             CCCCChhh------hhcCccccccccccC
Q psy14555         81 DKRATAGE------LLEDPFLADLTATRS  103 (222)
Q Consensus        81 ~~R~s~~~------~l~h~~~~~~~~~~~  103 (222)
                      .+|||+++      +++||||++.+|...
T Consensus       250 ~~R~t~~e~~~~~~i~~Hpff~~i~w~~l  278 (288)
T d1uu3a_         250 TKRLGCEEMEGYGPLKAHPFFESVTWENL  278 (288)
T ss_dssp             GGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred             hHCcCHHHHcCCHHHHcCCccCCCCHHHh
Confidence            99999988      478999998776543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=1.7e-23  Score=170.43  Aligned_cols=108  Identities=20%  Similarity=0.339  Sum_probs=86.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|.+||.+.  .......... ...+..|..+++++.+|+.+||..||
T Consensus       201 t~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~~L~~dP  277 (350)
T d1rdqe_         201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIV-SGKVRFPSHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHH-HCCCCCCTTCCHHHHHHHHHHSCSCT
T ss_pred             ccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCc--CHHHHHHHHh-cCCCCCCccCCHHHHHHHHHHhhhCH
Confidence            78999999999999999999999999999999999999743  3333322222 22345567889999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCCCCCCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      .+|+     +++++++||||++.+|.........+|
T Consensus       278 ~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p  313 (350)
T d1rdqe_         278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP  313 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCS
T ss_pred             HhccccccccHHHHHcCccccCCCHHHHHhcCCCcC
Confidence            9994     899999999999887765444434334

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.6e-23  Score=166.23  Aligned_cols=96  Identities=31%  Similarity=0.535  Sum_probs=77.3

Q ss_pred             CcceecCccc-----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCCCCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYS-----VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMHPEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~-----~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~   74 (222)
                      |+.|||||++     ....|+.++||||+||++|+|++|.+||.+... ......... .......+..+++++++|+.+
T Consensus       173 t~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~  251 (288)
T d2jfla1         173 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK  251 (288)
T ss_dssp             CCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG-GGHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             ccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence            7889999987     456799999999999999999999999976433 222222222 222334467889999999999


Q ss_pred             hcccCCCCCCChhhhhcCccccc
Q psy14555         75 CFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      ||..||.+|||++++++||||+.
T Consensus       252 ~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         252 CLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             HSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             HccCChhHCcCHHHHhcCcccCC
Confidence            99999999999999999999964

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=9.9e-24  Score=168.96  Aligned_cols=96  Identities=27%  Similarity=0.433  Sum_probs=78.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.++.|+.++||||+||++|+|++|.+||.+. ...........  .....+.+..+|+++.+|+.+||..
T Consensus       172 T~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  250 (307)
T d1a06a_         172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK  250 (307)
T ss_dssp             -CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCS
T ss_pred             CccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCC-CHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccC
Confidence            78999999999999999999999999999999999999753 22222222222  2233344567899999999999999


Q ss_pred             CCCCCCChhhhhcCccccc
Q psy14555         79 DPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~   97 (222)
                      ||.+|||++++++||||++
T Consensus       251 dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         251 DPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             SGGGSCCHHHHHHSTTTTS
T ss_pred             CHhHCcCHHHHhcCHhhCC
Confidence            9999999999999999975

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.5e-24  Score=168.06  Aligned_cols=104  Identities=26%  Similarity=0.370  Sum_probs=77.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccC--CCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKM--HPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|..||.+. ..............  ....+..+|..+++||++||..
T Consensus       179 t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  257 (293)
T d1jksa_         179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK  257 (293)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCS
T ss_pred             CCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCC-CHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccC
Confidence            67899999999999999999999999999999999999753 22222222222111  1222356799999999999999


Q ss_pred             CCCCCCChhhhhcCccccccccccCCC
Q psy14555         79 DPDKRATAGELLEDPFLADLTATRSSS  105 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~~~~~~~  105 (222)
                      ||.+|||++++++||||+...+.....
T Consensus       258 dP~~R~s~~eil~hp~~~~~~~~~~l~  284 (293)
T d1jksa_         258 DPKKRMTIQDSLQHPWIKPKDTQQALS  284 (293)
T ss_dssp             SGGGSCCHHHHHHSTTTCC--------
T ss_pred             ChhHCcCHHHHhcCcccCCCChhHhhc
Confidence            999999999999999998765554433

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=1.8e-23  Score=168.11  Aligned_cols=108  Identities=19%  Similarity=0.355  Sum_probs=85.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|+.||.+.  .......... ......|..+++++++++.+||..+|
T Consensus       164 t~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~--~~~~~~~~i~-~~~~~~p~~~s~~~~~li~~~L~~dp  240 (316)
T d1fota_         164 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--NTMKTYEKIL-NAELRFPPFFNEDVKDLLSRLITRDL  240 (316)
T ss_dssp             CTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSCT
T ss_pred             cccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCc--CHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhhhCH
Confidence            78999999999999999999999999999999999999753  2233322222 22345567789999999999999999


Q ss_pred             CCCC-----ChhhhhcCccccccccccCCCCCCCCC
Q psy14555         81 DKRA-----TAGELLEDPFLADLTATRSSSSGLLSP  111 (222)
Q Consensus        81 ~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~  111 (222)
                      .+|+     +++++++||||++..|.........+|
T Consensus       241 ~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~~~~~~p  276 (316)
T d1fota_         241 SQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETP  276 (316)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCS
T ss_pred             HhccccchhhHHHHHcCcccccCCHHHHHhCCCCcC
Confidence            9996     899999999999987765443333333

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.7e-23  Score=166.15  Aligned_cols=97  Identities=27%  Similarity=0.471  Sum_probs=76.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccC-----------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKM-----------------------   56 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~-----------------------   56 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|.+||.+. .....+.... ....                       
T Consensus       178 T~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
T d1blxa_         178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS-SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ  256 (305)
T ss_dssp             CCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCC
T ss_pred             ChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCC-CHHHHHHHHHHhhCCCchhcccccccchhhhhcccccc
Confidence            78999999999999999999999999999999999999753 2222222111 0000                       


Q ss_pred             -CCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         57 -HPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        57 -~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                       ....+..+++.+++|+.+||..||.+|||+.++++||||++.
T Consensus       257 ~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         257 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             CGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             chhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence             011234578999999999999999999999999999999865

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-23  Score=169.56  Aligned_cols=99  Identities=21%  Similarity=0.432  Sum_probs=82.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++.+..|+.++||||+||++|+|++|+.||.+  .....+..... ...+..|..+++++++|+.+||..+|
T Consensus       166 t~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~--~~~~~~~~~i~-~~~~~~p~~~s~~~~dli~~~L~~dP  242 (320)
T d1xjda_         166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG--QDEEELFHSIR-MDNPFYPRWLEKEAKDLLVKLFVREP  242 (320)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHSCSSG
T ss_pred             CCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCC--CCHHHHHHHHH-cCCCCCCccCCHHHHHHHHHhcccCC
Confidence            7889999999999999999999999999999999999974  23333333322 23456677889999999999999999


Q ss_pred             CCCCChh-hhhcCcccccccccc
Q psy14555         81 DKRATAG-ELLEDPFLADLTATR  102 (222)
Q Consensus        81 ~~R~s~~-~~l~h~~~~~~~~~~  102 (222)
                      .+||++. ++++||||++..+..
T Consensus       243 ~~R~s~~~~l~~hpff~~~~~~~  265 (320)
T d1xjda_         243 EKRLGVRGDIRQHPLFREINWEE  265 (320)
T ss_dssp             GGSBTTBSCGGGSGGGTTCCHHH
T ss_pred             CCCcCHHHHHHhCchhccCCHHH
Confidence            9999995 899999999876544

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=4.7e-23  Score=165.07  Aligned_cols=96  Identities=26%  Similarity=0.504  Sum_probs=78.1

Q ss_pred             CcceecCcccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcc
Q psy14555          1 MNVIFLTQYSVN---SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFE   77 (222)
Q Consensus         1 t~~y~aPe~~~~---~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~   77 (222)
                      |+.|||||++.+   +.|+.++||||+||++|||++|.+||.+. .....+........+...+..+++.+++|+.+||.
T Consensus       174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~  252 (309)
T d1u5ra_         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ  252 (309)
T ss_dssp             CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTC
T ss_pred             CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCc
Confidence            789999998764   46999999999999999999999999753 33333433333333344456789999999999999


Q ss_pred             cCCCCCCChhhhhcCccccc
Q psy14555         78 KDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        78 ~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .||.+|||++++++||||..
T Consensus       253 ~dP~~Rpt~~ell~Hp~~~~  272 (309)
T d1u5ra_         253 KIPQDRPTSEVLLKHRFVLR  272 (309)
T ss_dssp             SSGGGSCCHHHHTTCHHHHS
T ss_pred             CChhHCcCHHHHHhCHHhcC
Confidence            99999999999999999974

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.1e-23  Score=164.37  Aligned_cols=99  Identities=26%  Similarity=0.469  Sum_probs=76.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHH-------------------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALY-------------------------------   49 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~-------------------------------   49 (222)
                      |+.|||||++.+..|+.++||||+||++|||++|+.||...........                               
T Consensus       166 T~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (322)
T d1s9ja_         166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSR  245 (322)
T ss_dssp             SSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------
T ss_pred             CccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccc
Confidence            7899999999999999999999999999999999999975332211100                               


Q ss_pred             ---------HhhhccCCCCCC-ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         50 ---------RVGFHKMHPEIP-AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        50 ---------~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                               .......++..+ ..+|.++++|+.+||..||.+|||++++++||||+...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         246 PPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence                     000111112222 24688999999999999999999999999999998643

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.86  E-value=7.8e-23  Score=166.44  Aligned_cols=98  Identities=22%  Similarity=0.319  Sum_probs=79.3

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc--cCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH--KMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|.+||.+. ........+...  ......+..+++++++||.+||..
T Consensus       188 T~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  266 (350)
T d1koaa2         188 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA  266 (350)
T ss_dssp             CTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCS
T ss_pred             cccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccC
Confidence            78999999999999999999999999999999999999743 222222222222  222333456899999999999999


Q ss_pred             CCCCCCChhhhhcCccccccc
Q psy14555         79 DPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~~   99 (222)
                      ||.+|||++++++||||+...
T Consensus       267 dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         267 DPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             SGGGSCCHHHHHHSTTTSCTT
T ss_pred             ChhHCcCHHHHhcCcccCCCC
Confidence            999999999999999998653

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.86  E-value=1.2e-22  Score=165.37  Aligned_cols=97  Identities=23%  Similarity=0.325  Sum_probs=79.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh--ccCCCCCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF--HKMHPEIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|.+||.+. ........+..  ...+...+..+++++++||.+||..
T Consensus       191 t~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  269 (352)
T d1koba_         191 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-DDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQK  269 (352)
T ss_dssp             SGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCS
T ss_pred             cccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccC
Confidence            68899999999999999999999999999999999999753 22222222222  2233344567899999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||.+|||+.++++||||++.
T Consensus       270 dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         270 EPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             SGGGSCCHHHHHTSTTTSSC
T ss_pred             ChhHCcCHHHHhcCHhhCCC
Confidence            99999999999999999864

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-21  Score=156.35  Aligned_cols=97  Identities=20%  Similarity=0.252  Sum_probs=73.1

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC--------------------C
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH--------------------P   58 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~--------------------~   58 (222)
                      |+.|||||++.. ..|+.++||||+||++|||++|.+||.+.. ....+..+. ..+.+                    +
T Consensus       163 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~-~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (299)
T d1ua2a_         163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS-DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP  241 (299)
T ss_dssp             CCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCC
T ss_pred             ChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCC-HHHHHHHHHHhcCCCChhhccchhccchhhhhccCC
Confidence            788999998764 468999999999999999999999997532 222222111 00000                    0


Q ss_pred             CC-----CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 EI-----PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ..     ....++++.+|+.+||..||.+|||++++++||||+..
T Consensus       242 ~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         242 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             CCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence            00     12468899999999999999999999999999999864

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.3e-22  Score=161.18  Aligned_cols=97  Identities=20%  Similarity=0.317  Sum_probs=75.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHH--HHHHhhh-ccCCC--CCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQA--ALYRVGF-HKMHP--EIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~--~~~~~~~-~~~~~--~~~~~~~~~~~~li~~~   75 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|.+||.+......  .+..... .....  +.+..+|+++++||.+|
T Consensus       176 t~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  255 (335)
T d2ozaa1         176 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL  255 (335)
T ss_dssp             CCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHH
T ss_pred             CcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHH
Confidence            7899999999999999999999999999999999999974322211  1111111 11111  12246899999999999


Q ss_pred             cccCCCCCCChhhhhcCccccc
Q psy14555         76 FEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      |..||.+||++.+++.||||..
T Consensus       256 L~~dP~~R~s~~eil~hp~~~~  277 (335)
T d2ozaa1         256 LKTEPTQRMTITEFMNHPWIMQ  277 (335)
T ss_dssp             SCSSTTTSCCHHHHHHSHHHHT
T ss_pred             ccCChhHCcCHHHHHcCHHhhC
Confidence            9999999999999999999964

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.5e-22  Score=157.38  Aligned_cols=89  Identities=24%  Similarity=0.450  Sum_probs=73.9

Q ss_pred             CcceecCcccCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSY-SPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y-~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+..| +.++||||+||++|+|++|+.||..   . ..+..     .....+..+|+++++|+.+||..|
T Consensus       172 T~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~---~-~~i~~-----~~~~~~~~~s~~~~~li~~~L~~d  242 (273)
T d1xwsa_         172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH---D-EEIIR-----GQVFFRQRVSSECQHLIRWCLALR  242 (273)
T ss_dssp             CGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS---H-HHHHH-----CCCCCSSCCCHHHHHHHHHHTCSS
T ss_pred             CCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCC---c-hHHhh-----cccCCCCCCCHHHHHHHHHHccCC
Confidence            789999998877665 6789999999999999999999952   2 22221     223455678999999999999999


Q ss_pred             CCCCCChhhhhcCcccccc
Q psy14555         80 PDKRATAGELLEDPFLADL   98 (222)
Q Consensus        80 p~~R~s~~~~l~h~~~~~~   98 (222)
                      |.+|||++++++||||++.
T Consensus       243 p~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         243 PSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             GGGSCCHHHHHTSGGGSSC
T ss_pred             HhHCcCHHHHhcCHhhCCC
Confidence            9999999999999999863

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.1e-21  Score=156.26  Aligned_cols=113  Identities=29%  Similarity=0.399  Sum_probs=86.0

Q ss_pred             CcceecCcccCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhhhccCCCCCCccccHHHHHHHHHhc
Q psy14555          1 MNVIFLTQYSVNS--SYSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVGFHKMHPEIPAELSDKAKQFILRCF   76 (222)
Q Consensus         1 t~~y~aPe~~~~~--~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l   76 (222)
                      |+.|++||.+.+.  .|+.++||||+||++|+|++|..||...+..  ...+.. ......+..|..+++++.+|+.+||
T Consensus       193 ~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~-~~~~~~~~~~~~~s~~~~~li~~~l  271 (322)
T d1vzoa_         193 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR-RILKSEPPYPQEMSALAKDLIQRLL  271 (322)
T ss_dssp             CCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH-HHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-hcccCCCCCcccCCHHHHHHHHHHc
Confidence            6789999988765  4788999999999999999999999753322  222222 2333455667789999999999999


Q ss_pred             ccCCCCCC-----ChhhhhcCccccccccccCCCCCCCCCCCC
Q psy14555         77 EKDPDKRA-----TAGELLEDPFLADLTATRSSSSGLLSPEVN  114 (222)
Q Consensus        77 ~~~p~~R~-----s~~~~l~h~~~~~~~~~~~~~~~~~~~~~~  114 (222)
                      ..+|.+|+     +++++++||||++.++.........+|..+
T Consensus       272 ~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p  314 (322)
T d1vzoa_         272 MKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKP  314 (322)
T ss_dssp             CSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred             ccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCC
Confidence            99999998     479999999999877666555555555443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.1e-21  Score=157.84  Aligned_cols=97  Identities=25%  Similarity=0.355  Sum_probs=77.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC--CCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||...+..|+.++||||+||++|+|++|.+||... ........+.......  ..+..+++++++|+.+||..
T Consensus       166 t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  244 (321)
T d1tkia_         166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE-TNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVK  244 (321)
T ss_dssp             CGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCS
T ss_pred             ccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccC
Confidence            68899999999999999999999999999999999999742 2222222222222111  22246799999999999999


Q ss_pred             CCCCCCChhhhhcCcccccc
Q psy14555         79 DPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ||.+|||+.++++||||++.
T Consensus       245 dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         245 ERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             SGGGSCCHHHHHHSHHHHSC
T ss_pred             ChhHCcCHHHHhcCHhhccC
Confidence            99999999999999999753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=9.4e-21  Score=152.07  Aligned_cols=96  Identities=22%  Similarity=0.297  Sum_probs=71.6

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHh--hhccCCCCCC----------------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRV--GFHKMHPEIP----------------   61 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~~~~~~~----------------   61 (222)
                      |+.|+|||++.+. .|+.++||||+||++|||++|++||.+.. ........  ..........                
T Consensus       184 T~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (318)
T d3blha1         184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK  262 (318)
T ss_dssp             CGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCTTTSTTCCCC-------CCS
T ss_pred             CHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCC-HHHHHHHHHHhcCCCChhhccccchhhhhhhhcccc
Confidence            7889999987755 79999999999999999999999997532 22221111  1111111100                


Q ss_pred             ------------ccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         62 ------------AELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        62 ------------~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                                  ...++.+.+||.+||..||.+|+|+++++.||||+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         263 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             SCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             cccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence                        113677889999999999999999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.82  E-value=9e-21  Score=149.44  Aligned_cols=96  Identities=24%  Similarity=0.392  Sum_probs=75.6

Q ss_pred             CcceecCcccC------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhc--cCCCCCCccccHHHHHHH
Q psy14555          1 MNVIFLTQYSV------NSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFH--KMHPEIPAELSDKAKQFI   72 (222)
Q Consensus         1 t~~y~aPe~~~------~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li   72 (222)
                      |..|+|||.+.      ...|+.++||||+||++|+|++|+.||.+. ............  ..+.+.+..+|+++++|+
T Consensus       172 t~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  250 (277)
T d1phka_         172 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV  250 (277)
T ss_dssp             CGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHH
T ss_pred             cCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCC-CHHHHHHHHHhCCCCCCCcccccCCHHHHHHH
Confidence            67899999764      446889999999999999999999999753 222222222222  223334457899999999


Q ss_pred             HHhcccCCCCCCChhhhhcCccccc
Q psy14555         73 LRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        73 ~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                      .+||..+|.+||+++++++||||+.
T Consensus       251 ~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         251 SRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             HHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             HHHccCChhHCcCHHHHHcCHHHHH
Confidence            9999999999999999999999975

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.3e-21  Score=156.32  Aligned_cols=91  Identities=18%  Similarity=0.304  Sum_probs=77.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++||||+||++|||++ |.+||.+... ...+.........++.|..+++++++||.+||..+
T Consensus       229 t~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~-~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~d  307 (325)
T d1rjba_         229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFD  307 (325)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH-HHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999997 8999976433 23344444455666778889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+|||++++++|
T Consensus       308 P~~RPt~~ei~~~  320 (325)
T d1rjba_         308 SRKRPSFPNLTSF  320 (325)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999876

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.6e-21  Score=152.63  Aligned_cols=94  Identities=14%  Similarity=0.252  Sum_probs=78.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||.+.++.|+.++|||||||++|||++ |.+||.+.  ....+......+..++.|..++.++++|+.+||..+
T Consensus       173 t~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~d  250 (277)
T d1xbba_         173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYD  250 (277)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCC--CHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999998 89999754  333444444455667778889999999999999999


Q ss_pred             CCCCCChhhhh---cCcccc
Q psy14555         80 PDKRATAGELL---EDPFLA   96 (222)
Q Consensus        80 p~~R~s~~~~l---~h~~~~   96 (222)
                      |.+||++++++   +|+|+.
T Consensus       251 p~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         251 VENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             TTTSCCHHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhCHHhh
Confidence            99999999984   455543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.81  E-value=1.2e-20  Score=149.22  Aligned_cols=96  Identities=25%  Similarity=0.419  Sum_probs=72.5

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCC---------------------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMH---------------------   57 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~---------------------   57 (222)
                      |+.|+|||.+.+. .|+.++|+||+||++|||++|++||.... .......... ...+                     
T Consensus       163 ~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T d1ob3a_         163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS-EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY  241 (286)
T ss_dssp             CCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC
T ss_pred             cchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCC-HHHHHHHHHHhhCCCChhhccchhhhhhcccccccc
Confidence            5789999987654 56999999999999999999999997532 2222222110 0000                     


Q ss_pred             -----CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccc
Q psy14555         58 -----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLAD   97 (222)
Q Consensus        58 -----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~   97 (222)
                           ...+..+++.+.+|+++||..||++|||++++++||||++
T Consensus       242 ~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence                 0112456889999999999999999999999999999974

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.2e-20  Score=147.71  Aligned_cols=97  Identities=28%  Similarity=0.457  Sum_probs=72.9

Q ss_pred             CcceecCcccCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-ccCC---------------CCC---
Q psy14555          1 MNVIFLTQYSVNSS-YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HKMH---------------PEI---   60 (222)
Q Consensus         1 t~~y~aPe~~~~~~-y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~~~---------------~~~---   60 (222)
                      |+.|+|||...... ++.++|+||+||++|+|++|+.||.+. +.......... .+.+               ...   
T Consensus       165 t~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (298)
T d1gz8a_         165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD-SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW  243 (298)
T ss_dssp             CCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCC
T ss_pred             cceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCC-CHHHHHHHHHHhcCCCchhhccccccccccccccccc
Confidence            68899999766665 578999999999999999999999753 22222222110 0000               000   


Q ss_pred             --------CccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         61 --------PAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        61 --------~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                              ...++.++++|+.+||..||.+|||+.++++||||+..
T Consensus       244 ~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence                    12457899999999999999999999999999999865

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2e-20  Score=151.85  Aligned_cols=97  Identities=28%  Similarity=0.447  Sum_probs=73.4

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hc------------------------
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FH------------------------   54 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~------------------------   54 (222)
                      |+.|+|||++.+ ..++.++||||+||++|+|++|++||.+.. ......... ..                        
T Consensus       181 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (346)
T d1cm8a_         181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD-HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLP  259 (346)
T ss_dssp             CGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSC
T ss_pred             cccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCC-hHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCC
Confidence            688999998876 457899999999999999999999997532 222111110 00                        


Q ss_pred             cCC----CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         55 KMH----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        55 ~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ...    .......++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       260 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         260 ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             CCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             cccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence            000    11224568999999999999999999999999999999864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8e-20  Score=148.56  Aligned_cols=98  Identities=21%  Similarity=0.313  Sum_probs=74.0

Q ss_pred             CcceecCcccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-c------------------cCC---
Q psy14555          1 MNVIFLTQYSVN-SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-H------------------KMH---   57 (222)
Q Consensus         1 t~~y~aPe~~~~-~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~------------------~~~---   57 (222)
                      |+.|+|||++.+ ..|+.++||||+||++|||++|++||.... ....+..+.. .                  ...   
T Consensus       185 t~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~-~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  263 (350)
T d1q5ka_         185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK  263 (350)
T ss_dssp             CTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSS-HHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCC
T ss_pred             cccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCC-HHHHHHHHHHHhCCChHHhhhhhccchhhccccccc
Confidence            678999998765 579999999999999999999999997532 2222211100 0                  000   


Q ss_pred             -----CCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCccccccc
Q psy14555         58 -----PEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLT   99 (222)
Q Consensus        58 -----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~   99 (222)
                           .......++++.+|+.+||..||.+|||+.|+++||||+...
T Consensus       264 ~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             CCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             cCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence                 011234688999999999999999999999999999998753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=7.8e-21  Score=150.38  Aligned_cols=94  Identities=15%  Similarity=0.264  Sum_probs=78.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++||||+||++|||++ |.+||.+...  ..+......+..++.|..+++++.+|+.+||..+
T Consensus       175 t~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~--~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~  252 (285)
T d1u59a_         175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQGKRMECPPECPPELYALMSDCWIYK  252 (285)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             CccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCC
Confidence            567999999999999999999999999999998 9999986433  3333334455566778889999999999999999


Q ss_pred             CCCCCChhhh---hcCcccc
Q psy14555         80 PDKRATAGEL---LEDPFLA   96 (222)
Q Consensus        80 p~~R~s~~~~---l~h~~~~   96 (222)
                      |.+||++.++   ++|+|+.
T Consensus       253 p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         253 WEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHHHHHHHH
Confidence            9999999888   5577764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.9e-20  Score=146.10  Aligned_cols=90  Identities=21%  Similarity=0.327  Sum_probs=76.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++||||+||++|||++ |+.||...  ....+............|...+..+.+|+.+||..+
T Consensus       164 t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~--~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~d  241 (258)
T d1k2pa_         164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK  241 (258)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             CCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC--CHHHHHHHHHhCCCCCCcccccHHHHHHHHHHccCC
Confidence            567999999999999999999999999999998 89999754  333444444455566777888999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+|||++++++|
T Consensus       242 P~~RPt~~eil~~  254 (258)
T d1k2pa_         242 ADERPTFKILLSN  254 (258)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999886

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3e-20  Score=145.40  Aligned_cols=90  Identities=21%  Similarity=0.319  Sum_probs=74.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.+..|+.++||||+||++|||++ |.+||..  .....+............|..+++++.+|+.+||..+
T Consensus       165 t~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~--~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~  242 (263)
T d1sm2a_         165 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKER  242 (263)
T ss_dssp             CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS--CCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             CcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCC--CCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCC
Confidence            578999999999999999999999999999999 5666653  3334444444445556667788999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||+++++++|
T Consensus       243 p~~Rps~~~il~~  255 (263)
T d1sm2a_         243 PEDRPAFSRLLRQ  255 (263)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999876

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.4e-20  Score=146.04  Aligned_cols=92  Identities=18%  Similarity=0.400  Sum_probs=71.8

Q ss_pred             CcceecCcccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCC---CCCCccccHHHHHHHHH
Q psy14555          1 MNVIFLTQYSVN---SSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMH---PEIPAELSDKAKQFILR   74 (222)
Q Consensus         1 t~~y~aPe~~~~---~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~   74 (222)
                      |+.|||||++.+   +.|+.++|||||||++|||++|+.||.+.................   ...+..+++.+.+|+.+
T Consensus       169 t~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~  248 (276)
T d1uwha_         169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE  248 (276)
T ss_dssp             CGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHH
T ss_pred             CcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHH
Confidence            688999998864   358999999999999999999999997654433332222222122   23456788999999999


Q ss_pred             hcccCCCCCCChhhhhcC
Q psy14555         75 CFEKDPDKRATAGELLED   92 (222)
Q Consensus        75 ~l~~~p~~R~s~~~~l~h   92 (222)
                      ||..+|.+|||+++++.+
T Consensus       249 cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         249 CLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCHhHCcCHHHHHHH
Confidence            999999999999999886

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.1e-20  Score=151.25  Aligned_cols=97  Identities=21%  Similarity=0.324  Sum_probs=73.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh--h-------------------ccCCC-
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG--F-------------------HKMHP-   58 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~--~-------------------~~~~~-   58 (222)
                      |+.|+|||++.+..|++++|+||+||++|+|++|++||.+.+... ......  .                   ..... 
T Consensus       181 t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (355)
T d2b1pa1         181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY  259 (355)
T ss_dssp             CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCC
T ss_pred             cccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHH-HHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccc
Confidence            789999999999999999999999999999999999997532211 111100  0                   00000 


Q ss_pred             ------------------CCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 ------------------EIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                        ..+...+.++.+|+++||..||.+|||++++++||||+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             CCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             cccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence                              0012357789999999999999999999999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.3e-20  Score=148.27  Aligned_cols=94  Identities=16%  Similarity=0.286  Sum_probs=77.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATG-KPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++||||+||++|||++| .+||..  ............+..+..|..+++++.+|+.+||..+
T Consensus       173 t~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~--~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~  250 (272)
T d1qpca_         173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER  250 (272)
T ss_dssp             CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT--CCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCC--CCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999995 555543  3334444444555666777889999999999999999


Q ss_pred             CCCCCChhhhhc--Ccccc
Q psy14555         80 PDKRATAGELLE--DPFLA   96 (222)
Q Consensus        80 p~~R~s~~~~l~--h~~~~   96 (222)
                      |.+|||++++++  |+||.
T Consensus       251 P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         251 PEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhhhhh
Confidence            999999999988  67775

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=6.1e-20  Score=146.17  Aligned_cols=90  Identities=17%  Similarity=0.377  Sum_probs=75.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||.+.++.|+.++|||||||++|||++ |.+||.+.  ....+.........++.|..++..+.+|+.+||..+
T Consensus       196 t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~  273 (299)
T d1jpaa_         196 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKD  273 (299)
T ss_dssp             CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCC
Confidence            567999999999999999999999999999998 89999753  334444444455556677889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++++
T Consensus       274 P~~RPs~~ei~~~  286 (299)
T d1jpaa_         274 RNHRPKFGQIVNT  286 (299)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999998775

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.78  E-value=9.8e-20  Score=146.69  Aligned_cols=100  Identities=26%  Similarity=0.387  Sum_probs=74.7

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-------------hcc-----------
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-------------FHK-----------   55 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-------------~~~-----------   55 (222)
                      |+.|+|||.+.+. .|+.++|+||+||++|+|++|..||..............             ...           
T Consensus       192 t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (328)
T d3bqca1         192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL  271 (328)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTC
T ss_pred             CccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhc
Confidence            6789999987665 589999999999999999999999975333222111100             000           


Q ss_pred             -----------CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccccc
Q psy14555         56 -----------MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADLTA  100 (222)
Q Consensus        56 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~~~  100 (222)
                                 .....+..+++++.+||.+||..||.+|||++++++||||+...+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         272 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             ccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence                       011122457899999999999999999999999999999987543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.1e-20  Score=147.06  Aligned_cols=90  Identities=16%  Similarity=0.285  Sum_probs=75.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||++.++.|+.++||||+||++|||++ |.+||.....  ..+.........++.|..+++.+.+||.+||..+
T Consensus       172 t~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~d  249 (273)
T d1mp8a_         172 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD  249 (273)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999998 8999975432  3333333445556678889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+|||+.+++.|
T Consensus       250 p~~Rps~~ei~~~  262 (273)
T d1mp8a_         250 PSRRPRFTELKAQ  262 (273)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999876

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.8e-19  Score=146.17  Aligned_cols=97  Identities=21%  Similarity=0.356  Sum_probs=72.3

Q ss_pred             CcceecCccc-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hc-----------------------c
Q psy14555          1 MNVIFLTQYS-VNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FH-----------------------K   55 (222)
Q Consensus         1 t~~y~aPe~~-~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~-----------------------~   55 (222)
                      |+.|+|||++ .+..|+.++||||+||++|+|++|++||..... ........ ..                       .
T Consensus       175 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (345)
T d1pmea_         175 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY-LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP  253 (345)
T ss_dssp             CGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred             cceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCH-HHHHHHHhhhccCCChhhhhhhhhhhhhcccccCC
Confidence            5789999987 445689999999999999999999999974322 11111110 00                       0


Q ss_pred             CCCC-----CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 MHPE-----IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 ~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      ....     ....++.++++|+.+||..||.+|||+.++++||||+..
T Consensus       254 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         254 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             CCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             ccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            0000     123567899999999999999999999999999999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.6e-20  Score=149.52  Aligned_cols=91  Identities=20%  Similarity=0.312  Sum_probs=76.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++||||+||++|||++ |.+||.+..  ...+......+..++.|..++..+.+|+.+||..+
T Consensus       176 t~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~--~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~d  253 (317)
T d1xkka_         176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEKGERLPQPPICTIDVYMIMVKCWMID  253 (317)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--GGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred             CccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCC
Confidence            678999999999999999999999999999998 899997532  23333333445566777889999999999999999


Q ss_pred             CCCCCChhhhhcCc
Q psy14555         80 PDKRATAGELLEDP   93 (222)
Q Consensus        80 p~~R~s~~~~l~h~   93 (222)
                      |.+|||+.+++.|.
T Consensus       254 P~~RPs~~eil~~l  267 (317)
T d1xkka_         254 ADSRPKFRELIIEF  267 (317)
T ss_dssp             GGGSCCHHHHHHHH
T ss_pred             hhhCcCHHHHHHHH
Confidence            99999999999873

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1e-19  Score=143.85  Aligned_cols=96  Identities=16%  Similarity=0.300  Sum_probs=78.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|+|||++..+.|+.++||||+||++|||++|..|+.. +.....+..........+.+..++.++++|+.+||..+|
T Consensus       177 t~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP  255 (285)
T d1fmka3         177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP-GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP  255 (285)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST-TCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             cccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCC-CCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCH
Confidence            6789999999999999999999999999999996555433 233344444334455666788899999999999999999


Q ss_pred             CCCCChhhhhc--Cccccc
Q psy14555         81 DKRATAGELLE--DPFLAD   97 (222)
Q Consensus        81 ~~R~s~~~~l~--h~~~~~   97 (222)
                      .+||++.+++.  ++||..
T Consensus       256 ~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         256 EERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             GGSCCHHHHHHHHHTTTSC
T ss_pred             hHCcCHHHHHHHHhhhhcC
Confidence            99999999987  778764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=8.2e-20  Score=148.22  Aligned_cols=97  Identities=23%  Similarity=0.336  Sum_probs=72.0

Q ss_pred             CcceecCcccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhh-hccCC--------------------C
Q psy14555          1 MNVIFLTQYSVNS-SYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVG-FHKMH--------------------P   58 (222)
Q Consensus         1 t~~y~aPe~~~~~-~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~-~~~~~--------------------~   58 (222)
                      |+.|+|||+..+. .++.++|+||+||++|+|++|.+||.+... ........ .....                    .
T Consensus       181 ~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (348)
T d2gfsa1         181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESARNYIQSLT  259 (348)
T ss_dssp             HHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSC
T ss_pred             cccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcc
Confidence            4679999976665 468899999999999999999999975322 11111110 00000                    0


Q ss_pred             C--------CCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         59 E--------IPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        59 ~--------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                      .        .....++++++||.+||..||.+|||++++++||||++.
T Consensus       260 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         260 QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             cCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence            0        013468999999999999999999999999999999865

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.6e-19  Score=142.65  Aligned_cols=90  Identities=11%  Similarity=0.213  Sum_probs=74.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.++.|+.++|||||||++|||++|..|+.. ......+......+..++.|..++..+.+|+.+||..+|
T Consensus       176 t~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p  254 (283)
T d1mqba_         176 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW-ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER  254 (283)
T ss_dssp             CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTT-TCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSST
T ss_pred             CccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccc-cCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCH
Confidence            5679999999999999999999999999999995554433 233444555555566677788899999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+||++.+++.
T Consensus       255 ~~RPt~~eil~  265 (283)
T d1mqba_         255 ARRPKFADIVS  265 (283)
T ss_dssp             TTSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999976

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.77  E-value=4.2e-20  Score=145.53  Aligned_cols=95  Identities=23%  Similarity=0.421  Sum_probs=71.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCC--CCCccccHHHHHHHHHhccc
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHP--EIPAELSDKAKQFILRCFEK   78 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~   78 (222)
                      |+.|||||++.+..|+.++||||+||++|+|++|.+||.+. ...............+  ..+..+|+.+.+|+.+||..
T Consensus       177 t~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~  255 (277)
T d1o6ya_         177 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-SPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK  255 (277)
T ss_dssp             --TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCS
T ss_pred             cccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc-CHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccC
Confidence            68999999999999999999999999999999999999753 3333333332222221  23457899999999999999


Q ss_pred             CCCCCCChhhhhcCcccc
Q psy14555         79 DPDKRATAGELLEDPFLA   96 (222)
Q Consensus        79 ~p~~R~s~~~~l~h~~~~   96 (222)
                      ||.+||+..+.+.|+|.+
T Consensus       256 dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         256 NPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             SGGGSCSSHHHHHHHHHH
T ss_pred             CHhHCHhHHHHHHHHHHH
Confidence            999999544455566654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.8e-20  Score=146.72  Aligned_cols=91  Identities=21%  Similarity=0.334  Sum_probs=76.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATG-KPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++||||+||++|||++| .+||..... ...+......+..+..|..+++++++|+.+||..+
T Consensus       199 t~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  277 (299)
T d1ywna1         199 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE  277 (299)
T ss_dssp             GGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-SHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCC
Confidence            6789999999999999999999999999999986 578865433 23343444455666778889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+|||++++++|
T Consensus       278 P~~Rpt~~eil~~  290 (299)
T d1ywna1         278 PSQRPTFSELVEH  290 (299)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=5.3e-20  Score=143.87  Aligned_cols=90  Identities=17%  Similarity=0.285  Sum_probs=75.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|||||++.++.|+.++|||||||++|||++ |++||...  ....+......+..++.|..+++.+.+|+.+||..|
T Consensus       163 ~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~d  240 (262)
T d1byga_         163 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLD  240 (262)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             cccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccC
Confidence            568999999999999999999999999999998 78888643  223333333455667778889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+|||+.+++++
T Consensus       241 P~~Rps~~~l~~~  253 (262)
T d1byga_         241 AAMRPSFLQLREQ  253 (262)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999774

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3e-19  Score=141.36  Aligned_cols=98  Identities=20%  Similarity=0.359  Sum_probs=71.7

Q ss_pred             CcceecCcccCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhh-cc-----------------------
Q psy14555          1 MNVIFLTQYSVNSS-YSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGF-HK-----------------------   55 (222)
Q Consensus         1 t~~y~aPe~~~~~~-y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~-~~-----------------------   55 (222)
                      |..|++||++.... ++.++||||+||++|||++|..||....+.......... ..                       
T Consensus       164 ~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (292)
T d1unla_         164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYP  243 (292)
T ss_dssp             CGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCC
T ss_pred             ccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccccccc
Confidence            45677778776555 689999999999999999999887543333332222110 00                       


Q ss_pred             ---CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 ---MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 ---~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                         .....+..++..+.+|+.+||..||.+|||++++++||||++.
T Consensus       244 ~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~  289 (292)
T d1unla_         244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred             ccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCC
Confidence               0011234568899999999999999999999999999999864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.2e-19  Score=144.38  Aligned_cols=89  Identities=21%  Similarity=0.415  Sum_probs=76.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++.++.|+.++|||||||++|||++ |.+||..  .....+......+..+..|..+++++++|+.+||..+
T Consensus       200 ~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~--~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~d  277 (299)
T d1fgka_         200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV  277 (299)
T ss_dssp             GGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--CCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSS
T ss_pred             ChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCC--CCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCC
Confidence            568999999999999999999999999999998 7899864  3334444554556677778889999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+|||+.++++
T Consensus       278 P~~Rps~~eil~  289 (299)
T d1fgka_         278 PSQRPTFKQLVE  289 (299)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999976

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=1.7e-19  Score=142.84  Aligned_cols=90  Identities=18%  Similarity=0.288  Sum_probs=75.0

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |+.|||||++.++.|+.++||||+||++|||++|..||.. +.....+.........++.|..+++++++|+.+||..+|
T Consensus       179 ~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP  257 (287)
T d1opja_         179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP  257 (287)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSST-TCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             cccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC-cchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCH
Confidence            5789999999999999999999999999999996665543 333444444445566677788899999999999999999


Q ss_pred             CCCCChhhhhc
Q psy14555         81 DKRATAGELLE   91 (222)
Q Consensus        81 ~~R~s~~~~l~   91 (222)
                      .+|||++++++
T Consensus       258 ~~Rps~~ei~~  268 (287)
T d1opja_         258 SDRPSFAEIHQ  268 (287)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999965

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.8e-19  Score=141.68  Aligned_cols=90  Identities=21%  Similarity=0.377  Sum_probs=75.2

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|||||++.+..|+.++|||||||++|||++ |.+||.+. ...............++.+..++..+.+|+.+||..+
T Consensus       177 ~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~d  255 (273)
T d1u46a_         177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHK  255 (273)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCc-CHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999998 89999753 3333334444455566777888999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+|||+.+++.
T Consensus       256 p~~RPt~~ei~~  267 (273)
T d1u46a_         256 PEDRPTFVALRD  267 (273)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999863

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=4.2e-19  Score=144.57  Aligned_cols=98  Identities=23%  Similarity=0.375  Sum_probs=72.1

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHh-hhcc-------------------
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP-----QAALYRV-GFHK-------------------   55 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~-----~~~~~~~-~~~~-------------------   55 (222)
                      |+.|+|||.+....|+.++|+||+||++++|++|+.||......     ....... ...+                   
T Consensus       192 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  271 (362)
T d1q8ya_         192 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNS  271 (362)
T ss_dssp             CGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC
T ss_pred             cccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccccccccc
Confidence            67899999999999999999999999999999999999632110     0000000 0000                   


Q ss_pred             --------------------CCCCCCccccHHHHHHHHHhcccCCCCCCChhhhhcCcccccc
Q psy14555         56 --------------------MHPEIPAELSDKAKQFILRCFEKDPDKRATAGELLEDPFLADL   98 (222)
Q Consensus        56 --------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~l~h~~~~~~   98 (222)
                                          .....+...+.++++|+.+||..||.+|||++++++||||+..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         272 RGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             --CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             chhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence                                0112234467889999999999999999999999999999854

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=2.9e-19  Score=142.31  Aligned_cols=89  Identities=12%  Similarity=0.198  Sum_probs=74.5

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGK-PPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~-~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|+|||.+.+..|+.++|||||||++|||++|. +||.+  .....+......+..+..|..+++++.+|+.+||..+
T Consensus       205 ~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~--~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~  282 (301)
T d1lufa_         205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG--MAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKL  282 (301)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--SCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC--CCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999984 67864  3334444444455566778889999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |++|||+.++++
T Consensus       283 P~~RPt~~ev~~  294 (301)
T d1lufa_         283 PADRPSFCSIHR  294 (301)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999864

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.9e-19  Score=143.92  Aligned_cols=90  Identities=20%  Similarity=0.340  Sum_probs=76.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGK-PPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~-~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |..|+|||.+.++.|+.++|||||||++|||++|. +||..  .....+......+..+..|..+++++++||.+||..+
T Consensus       189 t~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~d  266 (309)
T d1fvra_         189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK  266 (309)
T ss_dssp             CTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred             CCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCC--CCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCC
Confidence            67899999999999999999999999999999965 56753  3444554544556667778889999999999999999


Q ss_pred             CCCCCChhhhhcC
Q psy14555         80 PDKRATAGELLED   92 (222)
Q Consensus        80 p~~R~s~~~~l~h   92 (222)
                      |.+||++.+++.|
T Consensus       267 P~~RPs~~eil~~  279 (309)
T d1fvra_         267 PYERPSFAQILVS  279 (309)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999987

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.1e-18  Score=139.46  Aligned_cols=90  Identities=19%  Similarity=0.385  Sum_probs=74.7

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMAT-GKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||++..+.|+.++|||||||++|||++ |.+||... .....+......+..+..|..++..+.+||.+||..|
T Consensus       210 t~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~d  288 (311)
T d1t46a_         210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD  288 (311)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             ChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC-CHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999998 66667543 3334444444455666677788999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+||++++++.
T Consensus       289 P~~RPs~~~il~  300 (311)
T d1t46a_         289 PLKRPTFKQIVQ  300 (311)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999985

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=8.3e-19  Score=140.27  Aligned_cols=91  Identities=15%  Similarity=0.234  Sum_probs=72.8

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccCC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKDP   80 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p   80 (222)
                      |..|+|||++..+.|+.++||||||+++|||++|..||... .....+......+..+..|..+++.+.+|+.+||..+|
T Consensus       197 t~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~-~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP  275 (311)
T d1r0pa_         197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKA  275 (311)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             cccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCC-CCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCH
Confidence            56899999999999999999999999999999977776532 22222333334455666777889999999999999999


Q ss_pred             CCCCChhhhhcC
Q psy14555         81 DKRATAGELLED   92 (222)
Q Consensus        81 ~~R~s~~~~l~h   92 (222)
                      .+||++.++++|
T Consensus       276 ~~RPs~~ei~~~  287 (311)
T d1r0pa_         276 EMRPSFSELVSR  287 (311)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.7e-18  Score=138.29  Aligned_cols=89  Identities=17%  Similarity=0.310  Sum_probs=74.9

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCChHHHHHHhhhccCCCCCCccccHHHHHHHHHhcccC
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATG-KPPFIELGSPQAALYRVGFHKMHPEIPAELSDKAKQFILRCFEKD   79 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~   79 (222)
                      |+.|||||.+.++.|+.++|||||||++|||++| .+||.+  ............+..++.|..++..+.+++.+||..+
T Consensus       198 t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~--~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~  275 (308)
T d1p4oa_         198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYN  275 (308)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT--SCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCC
Confidence            6789999999999999999999999999999997 577864  3334444444455566677889999999999999999


Q ss_pred             CCCCCChhhhhc
Q psy14555         80 PDKRATAGELLE   91 (222)
Q Consensus        80 p~~R~s~~~~l~   91 (222)
                      |.+|||+.++++
T Consensus       276 P~~RPs~~~il~  287 (308)
T d1p4oa_         276 PKMRPSFLEIIS  287 (308)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.67  E-value=1.1e-17  Score=132.90  Aligned_cols=96  Identities=14%  Similarity=0.121  Sum_probs=70.6

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCChHHHH--HHhhh---ccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSPQAAL--YRVGF---HKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|||||.+.+..|+.++||||+||++|||++|..||..........  .....   .......+..+++++.+|+.+|
T Consensus       176 t~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~c  255 (299)
T d1ckia_         176 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFC  255 (299)
T ss_dssp             CSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred             CccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHH
Confidence            789999999999999999999999999999999999997543322111  11111   1111122346789999999999


Q ss_pred             cccCCCCCCChhhh---hcCcccc
Q psy14555         76 FEKDPDKRATAGEL---LEDPFLA   96 (222)
Q Consensus        76 l~~~p~~R~s~~~~---l~h~~~~   96 (222)
                      |..+|.+||+++++   ++|+|.+
T Consensus       256 l~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         256 RSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             HHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccCChhHCcCHHHHHHHHHHHHHH
Confidence            99999999998754   5666654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.3e-16  Score=125.42  Aligned_cols=92  Identities=17%  Similarity=0.168  Sum_probs=64.9

Q ss_pred             CcceecCcccCCCC------CCchhhHHHHHHHHHHHHhCCCCCCCCC-------------ChHHHHHH-hhhccCCCCC
Q psy14555          1 MNVIFLTQYSVNSS------YSPQADIWSLGCTIVEMATGKPPFIELG-------------SPQAALYR-VGFHKMHPEI   60 (222)
Q Consensus         1 t~~y~aPe~~~~~~------y~~~~DiWS~Gvil~ell~g~~Pf~~~~-------------~~~~~~~~-~~~~~~~~~~   60 (222)
                      |+.|||||++.+..      |+.++|||||||++|||++|.+||....             ........ .......+..
T Consensus       175 t~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  254 (303)
T d1vjya_         175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI  254 (303)
T ss_dssp             CGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             ccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCC
Confidence            78999999876643      6789999999999999999988763211             11122222 2223333444


Q ss_pred             Ccc-----ccHHHHHHHHHhcccCCCCCCChhhhhcC
Q psy14555         61 PAE-----LSDKAKQFILRCFEKDPDKRATAGELLED   92 (222)
Q Consensus        61 ~~~-----~~~~~~~li~~~l~~~p~~R~s~~~~l~h   92 (222)
                      +..     ....+.+|+.+||..||.+|||+.+++.+
T Consensus       255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             CcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            332     23568899999999999999999998764

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.58  E-value=4.1e-16  Score=123.38  Aligned_cols=91  Identities=14%  Similarity=0.136  Sum_probs=68.4

Q ss_pred             CcceecCcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHhhh---ccCCCCCCccccHHHHHHHHHh
Q psy14555          1 MNVIFLTQYSVNSSYSPQADIWSLGCTIVEMATGKPPFIELGSP--QAALYRVGF---HKMHPEIPAELSDKAKQFILRC   75 (222)
Q Consensus         1 t~~y~aPe~~~~~~y~~~~DiWS~Gvil~ell~g~~Pf~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~   75 (222)
                      |+.|||||.+.+..|+.++||||+||++|||++|..||.+....  .........   .......+..+++++.+++..|
T Consensus       176 T~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~  255 (293)
T d1csna_         176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYA  255 (293)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred             chhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHH
Confidence            78999999999999999999999999999999999999743322  111111111   1111122345788999999999


Q ss_pred             cccCCCCCCChhhhhc
Q psy14555         76 FEKDPDKRATAGELLE   91 (222)
Q Consensus        76 l~~~p~~R~s~~~~l~   91 (222)
                      +..+|.+||+.+.+..
T Consensus       256 ~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         256 RNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHCCTTCCCCHHHHHH
T ss_pred             hcCCcccCcCHHHHHH
Confidence            9999999998876643

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=96.11  E-value=0.006  Score=37.11  Aligned_cols=65  Identities=11%  Similarity=0.147  Sum_probs=44.2

Q ss_pred             cchhHHHHHHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        144 QDRDHICQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ++...-.+..+..++.+..+|.++..++..++..+...       .-..++++++.++|.|++|...+..++
T Consensus        11 ~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~-------~t~~el~~~i~~~D~d~~G~I~f~eFl   75 (82)
T d1wrka1          11 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQN-------PTPEELQEMIDEVDEDGSGTVDFDEFL   75 (82)
T ss_dssp             HHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCC-------CCHHHHHHHHHTTCTTCCSSBCHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCC-------CCHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            33333334445666666568999999888855444333       237889999999999999976665544

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=95.63  E-value=0.011  Score=36.83  Aligned_cols=59  Identities=14%  Similarity=0.042  Sum_probs=41.1

Q ss_pred             HhhhcccC-CcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        155 KCIQRDVD-DCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       155 ~~~~~~~~-~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +.++..++ .+.|+.++++.++........  ......++++++++++|.|++|...++.++
T Consensus        16 ~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~--~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~   75 (93)
T d3c1va1          16 HKYSGKEGDKFKLNKSELKELLTRELPSFL--GKRTDEAAFQKLMSNLDSNRDNEVDFQEYC   75 (93)
T ss_dssp             HHHHTSSSSTTEECHHHHHHHHHHHCHHHH--TTCCSHHHHHHHHHHHCTTCSSSEEHHHHH
T ss_pred             HHHccCCCCCCeeCHHHHHHHHHHhchhcc--ccCCCHHHHHHHHHHHcCCCCCCCCHHHHH
Confidence            33333333 457999999997766533221  123557889999999999999998887765

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=95.38  E-value=0.016  Score=34.99  Aligned_cols=56  Identities=11%  Similarity=0.091  Sum_probs=40.4

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+..++. ++++.++.+++..++..+...       .-..++.+++.++|.|++|......++.
T Consensus        19 ~F~~~D~-d~~G~I~~~el~~~l~~~g~~-------~s~~e~~~~~~~~D~d~~g~I~~~eF~~   74 (81)
T d1avsa_          19 AFDMFDA-DGGGDISTKELGTVMRMLGQN-------PTKEELDAIIEEVDEDGSGTIDFEEFLV   74 (81)
T ss_dssp             HHHHHCT-TCSSEECHHHHHHHHHHTTCC-------CCHHHHHHHHHHHCTTCCSSEEHHHHHH
T ss_pred             HHHHHcC-CCCCeEchhHHHHHHHHcCCC-------CCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            3344444 699999999888855544333       3367789999999999999877666543

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.29  E-value=0.0094  Score=34.55  Aligned_cols=56  Identities=11%  Similarity=0.042  Sum_probs=41.7

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++ .++++.++.+++...+..+..       ..-.+++.+++..+|.|++|.......+..+
T Consensus         8 ~~~D-~d~~G~I~~~El~~~l~~lg~-------~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m   63 (67)
T d1tiza_           8 EKFD-KNKDGKLSLDEFREVALAFSP-------YFTQEDIVKFFEEIDVDGNGELNADEFTSCI   63 (67)
T ss_dssp             HHHC-TTSSSCEEHHHHHHHHHHTCT-------TSCHHHHHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred             HHHC-CCCcCcCcHHHHHHHHHHhcc-------ccchHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            3444 369999999988884444422       3446789999999999999998888776554

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=95.22  E-value=0.02  Score=35.16  Aligned_cols=53  Identities=19%  Similarity=0.040  Sum_probs=37.4

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      .+...||+++++.++......+-.  ...-...++++++++|.|+.|-..++..+
T Consensus        22 g~~~~Lsk~Elk~ll~~e~~~~~~--~~~~~~~v~~~~~~lD~n~Dg~idF~EF~   74 (87)
T d1e8aa_          22 GHFDTLSKGELKQLLTKELANTIK--NIKDKAVIDEIFQGLDANQDEQVDFQEFI   74 (87)
T ss_dssp             SSTTEECHHHHHHHHHHHSTTTST--TTTSHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             CCCCeEcHHHHHHHHHHHcccccc--CCCCHHHHHHHHHHHcCCCCCcCCHHHHH
Confidence            344569999999977654332210  12235679999999999999998887654

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=95.16  E-value=0.012  Score=36.53  Aligned_cols=52  Identities=17%  Similarity=0.128  Sum_probs=38.0

Q ss_pred             CCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        162 DDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       162 ~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +.+.|+.++++.++..+.....  ........++.+++++|.|++|...+...+
T Consensus        24 ~~G~is~~El~~~L~~~~~~~~--~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~   75 (93)
T d1zfsa1          24 DKYKLSKKELKDLLQTELSSFL--DVQKDADAVDKIMKELDENGDGEVDFQEFV   75 (93)
T ss_dssp             CCSSEEHHHHHHHHHHHSTTTS--CCSSCHHHHHHHHHHHTTTCCSEECSHHHH
T ss_pred             CCCEecHHHHHHHHHHhccccc--ccCCCHHHHHHHHHHHcCCCCCCCcHHHHH
Confidence            4589999999986666543322  112346788999999999999988777654

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=95.08  E-value=0.029  Score=34.00  Aligned_cols=65  Identities=11%  Similarity=0.119  Sum_probs=44.2

Q ss_pred             HHHHHHHhhhcccCCcccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        149 ICQVWLKCIQRDVDDCLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       149 ~~~~~~~~~~~~~~~~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +...+.+......+...||+.+++.|+.. +..++....  .-...++++++.||.|+.|-..++..+
T Consensus        12 ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~--~d~~~vd~~m~~LD~n~Dg~vdF~EF~   77 (83)
T d1xk4c1          12 IINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKEN--KNEKVIEHIMEDLDTNADKQLSFEEFI   77 (83)
T ss_dssp             HHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGG--GCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCC--CCHHHHHHHHHHhcCCCCCcCcHHHHH
Confidence            33334333334455678999999998876 344554221  234578999999999999998887764

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.022  Score=34.37  Aligned_cols=56  Identities=7%  Similarity=0.080  Sum_probs=42.7

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++. +++|.++.+++..++..+.-       ..-++++..|+..+|.|++|-......+..|
T Consensus        27 ~~~D~-~~~G~i~~~ef~~~l~~~~~-------~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          27 ENFDT-MKTNTISREEFRAICNRRVQ-------ILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHCT-TCSSCBCHHHHHHHHHHHTC-------CCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHCC-CCCceEChhHHHHHHHHhCC-------CCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            34443 68999999988885554433       3447889999999999999998888877654

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.85  E-value=0.025  Score=33.54  Aligned_cols=56  Identities=16%  Similarity=0.144  Sum_probs=41.2

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+..++. +++|.++.+++...+   +....    ..-..++..++.++|.|++|......++.
T Consensus        15 ~F~~~D~-d~~G~I~~~el~~~l---~~~g~----~~t~~e~~~~~~~~D~~~~g~I~~~eF~~   70 (77)
T d1f54a_          15 AFALFDK-DNNGSISSSELATVM---RSLGL----SPSEAEVNDLMNEIDVDGNHQIEFSEFLA   70 (77)
T ss_dssp             HHHHTCT-TCSSEEEHHHHHHHH---HHHTC----CCCHHHHHHHHHTTCCSSCCEEEHHHHHH
T ss_pred             HHHHHcC-CCCCeEChHHHHHHH---HHhCC----CCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            3444444 699999999888844   44422    23367899999999999999988877664

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.84  E-value=0.02  Score=35.84  Aligned_cols=66  Identities=8%  Similarity=0.057  Sum_probs=47.3

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhc---------chhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAE---------QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~---------~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      ++..++. +++|.|+.+++..++..+...+..         ......+..++.++.++|.|+.|..+....+.+++
T Consensus        21 ~F~~~D~-DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~   95 (99)
T d1snla_          21 FFILHDI-NSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ   95 (99)
T ss_dssp             HHHHHCS-SCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred             HHHHHCC-CCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence            4444444 699999999998866554322111         12345677789999999999999999988877654

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=94.53  E-value=0.043  Score=34.29  Aligned_cols=51  Identities=8%  Similarity=-0.015  Sum_probs=37.0

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+.+.||.++++.++........ .+    ...+++++.++|.|++|-..++.++.
T Consensus        28 g~~g~is~~El~~~l~~~~~~~~-~~----~~~v~~l~~~~D~d~DG~IdF~EF~~   78 (98)
T d1yuta1          28 GRKDSLSVNEFKELVTQQLPHLL-KD----VGSLDEKMKSLDVNQDSELKFNEYWR   78 (98)
T ss_dssp             SSSSCBCHHHHHHHHHHHCTTTT-CC----SSCHHHHHHHHCTTCCSCBCHHHHHH
T ss_pred             CCCCEEcHHHHHHHHHHhccccC-CC----HHHHHHHHHHhcCCCCCcCCHHHHHH
Confidence            34699999999997665433221 11    23589999999999999988887653

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=94.41  E-value=0.0083  Score=36.87  Aligned_cols=55  Identities=16%  Similarity=0.146  Sum_probs=41.8

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      ..++. ++++.++.+++..   .++....    ..-+.++.++++++|.|++|...+..+|..
T Consensus        30 ~~~D~-d~~G~I~~~el~~---~l~~lg~----~~s~~e~~~l~~~~D~d~~g~I~~~EFl~a   84 (87)
T d1s6ja_          30 KMIDT-DNSGTITFDELKD---GLKRVGS----ELMESEIKDLMDAADIDKSGTIDYGEFIAA   84 (87)
T ss_dssp             HHHCT-TCSSCEEHHHHHH---HHHTTTS----SCCHHHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred             HHHcC-CCCCcCcHHHHHH---HHHHcCC----CCCHHHHHHHHHHcCCCCCCeEeHHHHHHH
Confidence            34443 6899999997777   5555422    345678999999999999999888888754

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=94.20  E-value=0.033  Score=33.41  Aligned_cols=53  Identities=11%  Similarity=0.108  Sum_probs=39.2

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +.++ .+++|.++.+++...+..+.   .     ....++.+++.++|.|++|.......+.
T Consensus        13 ~~~D-~d~~G~I~~~El~~~l~~lg---~-----~~~~ei~~~~~~~D~d~~G~I~~~EF~~   65 (81)
T d2opoa1          13 KRFD-TNGDGKISSSELGDALKTLG---S-----VTPDEVRRMMAEIDTDGDGFISFDEFTD   65 (81)
T ss_dssp             HHHC-TTCSSEEEHHHHHHHHHTTT---T-----CCHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             HHHC-CCCCCCCcHHHHHHHHHHhh---c-----CCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            3444 37999999998888544442   1     1346799999999999999988777664

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=93.99  E-value=0.043  Score=33.50  Aligned_cols=49  Identities=10%  Similarity=0.082  Sum_probs=36.0

Q ss_pred             ccCCc-ccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        160 DVDDC-LLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       160 ~~~~~-~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      .++++ .++.++++.++... ..++.       .++++++++++|.|+.|-..+..++
T Consensus        22 ~dG~~~~l~~~Elk~ll~~e~~~~~~-------~~~v~~i~~~~D~n~DG~IdF~EF~   72 (87)
T d1xk4a1          22 IKGNFHAVYRDDLKKLLETESPQYIR-------KKGADVWFKELDINTDGAVNFQEFL   72 (87)
T ss_dssp             SSSCTTCBCHHHHHHHHHHHSCHHHH-------TTCHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             cCCCCCccCHHHHHHHHHHhcCCccc-------hHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            34555 56899988877653 33432       4568999999999999998887765

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=93.92  E-value=0.054  Score=33.65  Aligned_cols=52  Identities=13%  Similarity=0.141  Sum_probs=37.9

Q ss_pred             cCCcccCHHHHHHHHHH-HHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        161 VDDCLLSKAHLEILMQG-MRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~-~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      .+...||+++++.|+.. +..++..   ..-...++++++.||.|+.|-..++..+
T Consensus        23 G~~~tLsk~Elk~Ll~~El~~~l~~---~~d~~~vd~im~~LD~n~Dg~vdF~EF~   75 (95)
T d1qlsa_          23 GNNTKISKTEFLIFMNTELAAFTQN---QKDPGVLDRMMKKLDLDSDGQLDFQEFL   75 (95)
T ss_dssp             SCTTCBCHHHHHHHHTTTSHHHHHH---CCCTHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHHHHHHhcC---CCCHHHHHHHHHHhcCCCCCcCcHHHHH
Confidence            34467999999998854 3444431   1224569999999999999998888764

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.88  E-value=0.051  Score=30.98  Aligned_cols=54  Identities=11%  Similarity=0.232  Sum_probs=40.1

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ++.++. +++|.++.++++..+..+..       ..-..++.+++.++|.|++|.......+
T Consensus         9 F~~fD~-d~~G~I~~~el~~~l~~lg~-------~~~~~e~~~l~~~~D~d~~g~I~~~eF~   62 (65)
T d1fw4a_           9 FRVFDK-DGNGYISAAELRHVMTNLGE-------KLTDEEVDEMIREADIDGDGQVNYEEFV   62 (65)
T ss_dssp             HHHHCT-TCSSEECHHHHHHHHHHTTC-------CCCHHHHHHHHHTTCTTCSSSEEHHHHH
T ss_pred             HHHHcC-CCCCcCCHHHHHHHHHHhCC-------CCCHHHHHHHHHHcCCCCCCcEeHHHHH
Confidence            344444 79999999988885554433       3446789999999999999987766554

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=93.87  E-value=0.067  Score=31.56  Aligned_cols=54  Identities=11%  Similarity=0.101  Sum_probs=39.5

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +.++ .++++.++.+++..++..+-..       .-..++..++.++|.|++|.......+.
T Consensus        16 ~~~D-~d~~G~I~~~el~~~l~~~g~~-------~~~~e~~~~~~~~D~d~~G~I~~~EF~~   69 (77)
T d1oqpa_          16 RLFD-DDNSGTITIKDLRRVAKELGEN-------LTEEELQEMIAEADRNDDNEIDEDEFIR   69 (77)
T ss_dssp             HHHC-TTCSSSEEHHHHHHHHHHHTCC-------CCHHHHHHHHHHHCCSSSSEECHHHHHH
T ss_pred             HHHc-CCCCCEechHHHHHHHHHhCCC-------CCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            4444 4799999999888855544333       3356789999999999999877766553

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=93.73  E-value=0.061  Score=33.03  Aligned_cols=64  Identities=16%  Similarity=0.169  Sum_probs=42.0

Q ss_pred             HHHHHHHhhhcccCCcccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        149 ICQVWLKCIQRDVDDCLLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       149 ~~~~~~~~~~~~~~~~~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      +...+.+....+.+...||+.+++.|+..- ..++..   ..-...++++++.||.|+.|-..++..+
T Consensus        11 ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~---~~d~~~~d~~m~~LD~n~Dg~vdF~EF~   75 (90)
T d3cr5x1          11 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEE---IKEQEVVDKVMETLDSDGDGECDFQEFM   75 (90)
T ss_dssp             HHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCC---CCSHHHHHHHHHHHCTTSSSSBCHHHHH
T ss_pred             HHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcC---CCCHHHHHHHHHHhcCCCCCcCCHHHHH
Confidence            333333333333344679999999987763 334432   1224559999999999999998888764

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=93.63  E-value=0.059  Score=33.38  Aligned_cols=63  Identities=16%  Similarity=0.161  Sum_probs=40.3

Q ss_pred             HHHHHHhhhcccCCcccCHHHHHHHHHHH-HHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        150 CQVWLKCIQRDVDDCLLSKAHLEILMQGM-RDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       150 ~~~~~~~~~~~~~~~~ls~~~i~~l~~~~-~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ...+.+......+...||+++++.|+..- ..++.   ...-...++++++.||.|+.|...++..+
T Consensus        12 i~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~---~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~   75 (94)
T d1j55a_          12 IDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQ---SGKDKDAVDKLLKDLDANGDAQVDFSEFI   75 (94)
T ss_dssp             HHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC---------CHHHHHHHHHCSSSSSSEEHHHHH
T ss_pred             HHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhc---CCCCHHHHHHHHHHhcCCCCCcCCHHHHH
Confidence            33333333333444679999999988763 33433   12334569999999999999998887654

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=93.46  E-value=0.033  Score=32.67  Aligned_cols=56  Identities=13%  Similarity=0.086  Sum_probs=40.6

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+..++. +++|.++.+++..   .++....    ..-.+++..+++.+|.|++|-..+...+.
T Consensus        13 ~F~~~D~-d~~G~I~~~el~~---~l~~~g~----~~s~~~~~~~~~~~D~d~~g~I~f~eF~~   68 (73)
T d2pq3a1          13 AFSLFDK-DGDGTITTKELGT---VMRSLGQ----NPTEAELQDMINEVDADGNGTIDFPEFLT   68 (73)
T ss_dssp             HHHHTCT-TSSSEEEGGGHHH---HHHHTTC----CCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred             HHHHHcC-CCCceEeHHHHHH---HHHHhCC----CCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence            3445554 6999999998877   5554432    23367899999999999999877776653

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.44  E-value=0.026  Score=31.86  Aligned_cols=49  Identities=12%  Similarity=0.036  Sum_probs=37.7

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      .++++.++.+++..   .++....    .....++..+++.+|.|++|.......|
T Consensus        12 ~~~~G~I~~~el~~---~l~~~g~----~~~~~ei~~l~~~~D~d~dg~I~~~eFl   60 (61)
T d2fcea1          12 KESTGKVSVGDLRY---MLTGLGE----KLTDAEVDELLKGVEVDSNGEIDYKKFI   60 (61)
T ss_dssp             TTCCSCEEHHHHHH---HHHHTTC----CCCHHHHHHHHTTCCCCTTSEECHHHHH
T ss_pred             CCCCCeEeHHHHHH---HHHHcCC----CCCHHHHHHHHHHcCCCCCCcEeHHHhc
Confidence            37999999998877   4444432    4557789999999999999987766554

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=93.42  E-value=0.022  Score=35.89  Aligned_cols=56  Identities=11%  Similarity=-0.035  Sum_probs=39.1

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ..++.|+.++++.++......+.......-...++.+++++|.|+.|...+...+.
T Consensus        21 ~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~   76 (100)
T d1psra_          21 RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLS   76 (100)
T ss_dssp             CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHH
Confidence            46689999999997776533321111112245689999999999999988887664

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.35  E-value=0.041  Score=32.53  Aligned_cols=59  Identities=12%  Similarity=0.121  Sum_probs=40.7

Q ss_pred             HHHhhhcc-cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRD-VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~-~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++.++.. ++.+.++.++++.++..+-..+.     .-+.++++++.++|.|++|-.....++.
T Consensus        10 ~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~-----~~~~ei~~~~~~~D~d~dG~I~f~EF~~   69 (76)
T d1qx2a_          10 AFEVFAAKEGDPNQISKEELKLVMQTLGPSLL-----KGMSTLDEMIEEVDKNGDGEVSFEEFLV   69 (76)
T ss_dssp             HHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSC-----TTSCSHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             HHHHHcccCCCCCEECHHHHHHHHHHhCCcCC-----CCHHHHHHHHHHhhcCCCCcCcHHHHHH
Confidence            34555443 34699999999886665533321     1234589999999999999888777654

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=93.07  E-value=0.031  Score=34.34  Aligned_cols=56  Identities=20%  Similarity=0.104  Sum_probs=39.9

Q ss_pred             hhhcccCCc-ccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        156 CIQRDVDDC-LLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       156 ~~~~~~~~~-~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ..+..++++ .||..+++.|+........    ..-..+++++++++|.|++|-..++..+
T Consensus        17 kya~~dg~~~~ls~~Elk~Ll~~e~~~~~----~~~~~~~~~~~~~lD~d~Dg~IdF~EF~   73 (89)
T d1k8ua_          17 KYSGREGDKHTLSKKELKELIQKELTIGS----KLQDAEIARLMEDLDRNKDQEVNFQEYV   73 (89)
T ss_dssp             HHHTSSSCTTEEEHHHHHHHHHHHSCCGG----GTTSHHHHHHHHHHHHTTTCEEEHHHHH
T ss_pred             HHcccCCCCCeecHHHHHHHHHHHHHhhc----cCCHHHHHHHHHHhcCCCCCCCcHHHHH
Confidence            334445666 6999999998776543322    2234679999999999999988777654

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=93.04  E-value=0.04  Score=34.14  Aligned_cols=55  Identities=15%  Similarity=0.054  Sum_probs=39.9

Q ss_pred             cccCCc-ccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        159 RDVDDC-LLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       159 ~~~~~~-~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ..++++ .|+.++++.++...-...- + .......++++++++|.|+.|-..++..+
T Consensus        20 ~~dGd~~~ls~~Elk~ll~~~~~~~~-~-~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~   75 (93)
T d1ksoa_          20 GRCGDKYKLCQAELKELLQKELATWT-P-TEFRECDYNKFMSVLDTNKDCEVDFVEYV   75 (93)
T ss_dssp             TSSSCTTCEEHHHHHHHHHHHTTTCC-C-CTTCHHHHHHHHHHHHHTTTCEECHHHHH
T ss_pred             CcCCCCCeECHHHHHHHHHHhhhccc-c-cCCCHHHHHHHHHHHcCCCCCCCcHHHHH
Confidence            345666 6999999997766533321 1 12346789999999999999998888765

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=92.78  E-value=0.072  Score=32.78  Aligned_cols=51  Identities=12%  Similarity=0.085  Sum_probs=36.8

Q ss_pred             CcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        163 DCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       163 ~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      ++.||.++++.++........  ....-...++.+++++|.|+.|-..++..+
T Consensus        22 dG~is~~El~~~l~~~~~~~~--~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~   72 (92)
T d1a4pa_          22 KGYLTKEDLRVLMEKEFPGFL--ENQKDPLAVDKIMKDLDQCRDGKVGFQSFF   72 (92)
T ss_dssp             GCSBCHHHHHHHHHHHCHHHH--HHSCCTTHHHHHHHHHCTTSSSCBCHHHHH
T ss_pred             CCEEcHHHHHHHHHHhccccc--cccCCHHHHHHHHHHHhCCCCCCCcHHHHH
Confidence            699999999997765422211  112235568999999999999998887753

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=92.77  E-value=0.085  Score=30.99  Aligned_cols=55  Identities=11%  Similarity=0.183  Sum_probs=40.3

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++. ++++.++.+++..++..+..       ..-.++++.++.++|.|++|......++.
T Consensus        15 F~~fD~-~~~G~I~~~el~~~l~~lg~-------~~~~~e~~~~~~~~D~d~dg~I~~~EF~~   69 (75)
T d1jc2a_          15 FRIFDK-NADGFIDIEELGEILRATGE-------HVIEEDIEDLMKDSDKNNDGRIDFDEFLK   69 (75)
T ss_dssp             HHHHCC-STTSSEEHHHHHHHHHHSSS-------CCCHHHHHHHHHHHCSSSCSEECHHHHHH
T ss_pred             HHHHcC-CCcCeEcHHHHHHHHHhcCC-------CccHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            344444 68999999988885444432       33467799999999999999877776654

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=92.64  E-value=0.069  Score=33.99  Aligned_cols=58  Identities=9%  Similarity=0.049  Sum_probs=42.2

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++ .+++|.++.++++.++..+....    ...-.++++++++++|.|++|.......+.
T Consensus        47 F~~~D-~d~~G~I~~~El~~~l~~l~~~g----~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~  104 (109)
T d5pala_          47 FEILD-KDQSGFIEEEELKGVLKGFSAHG----RDLNDTETKALLAAGDSDHDGKIGADEFAK  104 (109)
T ss_dssp             HHHHC-TTCSSEECHHHHHTHHHHHCTTC----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred             Hhhhc-CCCCCeEcHHHHHHHHHHhhhcc----CcCCHHHHHHHHHHhCCCCCCCEeHHHHHH
Confidence            34444 36899999999888665553322    134467799999999999999887776654

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=92.44  E-value=0.068  Score=33.96  Aligned_cols=61  Identities=8%  Similarity=0.109  Sum_probs=43.8

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      +..++. +++|.++.+++..++..+....    ...-..++..+++++|.|++|-.+....+.-.+
T Consensus        47 F~~~D~-d~~G~I~~~El~~~l~~l~~~~----~~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~  107 (109)
T d1rwya_          47 FHILDK-DKSGFIEEDELGSILKGFSSDA----RDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA  107 (109)
T ss_dssp             HHHHST-TCSSEECHHHHHTHHHHHCTTC----CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             hhcccC-CCCCcCcHHHHHHHHHHhcccc----ccCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            345554 6899999998888665553321    123466789999999999999988887765443

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.43  E-value=0.07  Score=31.69  Aligned_cols=57  Identities=19%  Similarity=0.057  Sum_probs=39.1

Q ss_pred             Hhhhc-ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQR-DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~-~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      +.++. +.+.+.|+.++++.++..+.....     .-.+.++.++.++|.|++|...+..++.
T Consensus        14 ~~y~~~d~~~g~is~~Elk~ll~~~~~~~~-----~~~~~v~~~~~~~D~d~dG~Idf~EF~~   71 (78)
T d1cb1a_          14 EKYAAKEGDPNQLSKEELKQLIQAEFPSLL-----KGPRTLDDLFQELDKNGDGEVSFEEFQV   71 (78)
T ss_dssp             HHHHTTSSSTTEECHHHHHHHHHHHCSSCC-----SSCCCSSHHHHHTCCCSSSSEEHHHHHH
T ss_pred             HHHccCCCCCCEECHHHHHHHHHHHcCCCC-----CCHHHHHHHHHHHcCCCCCcCcHHHHHH
Confidence            44433 345689999999997766532221     1133578999999999999887776653

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.01  E-value=0.079  Score=35.98  Aligned_cols=58  Identities=3%  Similarity=0.044  Sum_probs=44.5

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccccc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHE  220 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~~  220 (222)
                      .+..++ .++++.++.+++..++..+         .....++++++..+|.|++|......++..|++
T Consensus       107 ~F~~~D-~d~dG~Is~~E~~~~~~~~---------~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~  164 (176)
T d1nyaa_         107 IVGMCD-KNADGQINADEFAAWLTAL---------GMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD  164 (176)
T ss_dssp             HHHHTC-SSCCSEEEHHHHHHHHHHT---------TCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred             HHHHHc-cCCChhhhHHHHHHHHHhc---------CCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            334444 3699999999888855432         133577899999999999999999999887765

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=91.84  E-value=0.037  Score=31.99  Aligned_cols=55  Identities=11%  Similarity=0.097  Sum_probs=39.9

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ..++. ++++.++.+++..   .++....   ...-.++++.+++.+|.|++|-.+....+.
T Consensus         9 ~~~D~-d~~G~I~~~el~~---~l~~~g~---~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~   63 (68)
T d1c7va_           9 KVFDA-NGDGVIDFDEFKF---IMQKVGE---EPLTDAEVEEAMKEADEDGNGVIDIPEFMD   63 (68)
T ss_dssp             HHHSC-SGGGEECHHHHHH---HSSTTTT---CCCCHHHHHHHHHHHCSSGGGSEEHHHHHH
T ss_pred             HHHcC-CCcCeEcHHHHHH---HHHHhCC---CCCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            34443 6899999997777   4444422   123467899999999999999988877654

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.39  E-value=0.26  Score=34.03  Aligned_cols=63  Identities=5%  Similarity=0.068  Sum_probs=45.0

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhc-----chhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAE-----QQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~-----~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++.++ .++++.++.+++..++..+......     .+....++.++++++++|.|+.|-.+++....
T Consensus       101 ~F~~~D-~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~  168 (187)
T d1g8ia_         101 AFKLYD-LDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE  168 (187)
T ss_dssp             HHHHHC-TTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred             HHHHHh-cCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            334444 3799999999999988766543331     23346677889999999999999877766554

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=91.09  E-value=0.069  Score=31.92  Aligned_cols=56  Identities=11%  Similarity=0.112  Sum_probs=40.4

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++. ++++.++.+++..   .++....    ..-..+++.++.++|.|++|-.....++.-+
T Consensus        22 ~~~D~-d~~G~I~~~el~~---~l~~~g~----~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m   77 (81)
T d1fi5a_          22 RMFDK-NADGYIDLEELKI---MLQATGE----TITEDDIEELMKDGDKNNDGRIDYDEFLEFM   77 (81)
T ss_dssp             HHHCS-SCSSEECHHHHHH---HHHTSSS----CCCHHHHHHHHHHHCSSSSSSEEHHHHHHHH
T ss_pred             HHHcC-CCCCcccHHHHHH---HHHhcCC----CCCHHHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence            44443 6899999998877   4444422    3345779999999999999987777666543

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.37  E-value=0.27  Score=33.66  Aligned_cols=60  Identities=12%  Similarity=0.092  Sum_probs=45.7

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhc-----chhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAE-----QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~-----~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      .++++.++.+++..++..+......     .+....++.++++++++|.|++|..+....+.+++
T Consensus       106 ~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~  170 (181)
T d1bjfa_         106 LDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK  170 (181)
T ss_dssp             TTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHH
T ss_pred             cCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            4699999999999977766543221     13356778899999999999999988877766554

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.29  E-value=0.05  Score=34.60  Aligned_cols=62  Identities=11%  Similarity=0.091  Sum_probs=42.8

Q ss_pred             HHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        152 VWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       152 ~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ..++.++. ++++.++.++++.++..+....    ...-.++++.+++.+|.|++|.......+...
T Consensus        45 ~~F~~~D~-d~~G~I~~~El~~~l~~l~~~~----~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m  106 (108)
T d1rroa_          45 DIFRFIDN-DQSGYLDGDELKYFLQKFQSDA----RELTESETKSLMDAADNDGDGKIGADEFQEMV  106 (108)
T ss_dssp             HHHHHHCT-TCSSEECTHHHHTGGGGTCTTS----CCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred             HHHhhhcC-CCCCeEcHHHHHHHHHHHHhcc----CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            34455554 6899999998887544432221    12346778999999999999998887766543

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.11  E-value=0.16  Score=35.28  Aligned_cols=62  Identities=6%  Similarity=0.051  Sum_probs=44.7

Q ss_pred             HHHHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        150 CQVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       150 ~~~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .+.|.+.+.....+|.++.+++...+   ...    ........+++++..+|.|++|...+...+.++
T Consensus        23 i~~~~~~F~~~~~~G~i~~~Ef~~~l---~~~----~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l   84 (189)
T d1jbaa_          23 LQEWYKKFLEECPSGTLFMHEFKRFF---KVP----DNEEATQYVEAMFRAFDTNGDNTIDFLEYVAAL   84 (189)
T ss_dssp             HHHHHHHHHSSSTTCCEEHHHHHHHH---HCC----SSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHH
T ss_pred             HHHHHHHhcccCCCCeeeHHHHHHHH---HHc----CCCccHHHHHHHHHHhccCCCCeEeehhHHHHH
Confidence            45667777766678999999777743   222    223446668899999999999988888777654

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.72  E-value=0.16  Score=31.02  Aligned_cols=48  Identities=4%  Similarity=-0.031  Sum_probs=35.9

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .+++|.++.+++..++.   +.      ..-..++.++...+|.|++|.-....++.
T Consensus        20 ~d~~G~i~~~e~~~~l~---~~------~l~~~~l~~i~~~~D~d~dG~l~~~EF~~   67 (92)
T d1fi6a_          20 PDLNGFIPGSAAKEFFT---KS------KLPILELSHIWELSDFDKDGALTLDEFCA   67 (92)
T ss_dssp             CSTTCEEEHHHHHHHHH---HH------SSCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred             CCcccchhHHHHHHHHH---Hc------cCCHHHHHHHHHHhCCCCCCeecHHHHHH
Confidence            36899999997777444   33      13356899999999999999876666553

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=89.57  E-value=0.073  Score=33.88  Aligned_cols=60  Identities=10%  Similarity=0.138  Sum_probs=41.2

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ++.++. +++|.++.++++.++..+...    ....-..+++++++++|.|++|.......+.-.
T Consensus        47 F~~~D~-d~~G~I~~~El~~~l~~l~~~----g~~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m  106 (109)
T d1pvaa_          47 FKAIDA-DASGFIEEEELKFVLKSFAAD----GRDLTDAETKAFLKAADKDGDGKIGIDEFETLV  106 (109)
T ss_dssp             HHHHCT-TCSSSBCHHHHHTGGGGTCTT----CCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             hhCccC-CCcCeEcHHHHHHHHHHhhhc----CCCCCHHHHHHHHHHHCCCCcCcEeHHHHHHHH
Confidence            344444 689999999877743332211    122346779999999999999998888766543

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.75  E-value=0.34  Score=33.80  Aligned_cols=66  Identities=8%  Similarity=-0.091  Sum_probs=47.1

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhc-------chhhHHHHHHHHHHHHcCCCccchhhHHHhhcccc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAE-------QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFH  219 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~-------~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~  219 (222)
                      .++.++ .++++.++.+++...+..+......       .+.....+.++.++.++|.|++|..+....+.+.+
T Consensus       104 ~F~~~D-~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~  176 (201)
T d1omra_         104 AFSLYD-VDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTL  176 (201)
T ss_dssp             HHHHHC-TTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHH
T ss_pred             HHHHHc-cCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence            334444 4789999999999877766554321       12223566679999999999999988888776654

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.44  E-value=0.32  Score=33.70  Aligned_cols=63  Identities=3%  Similarity=-0.019  Sum_probs=46.1

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhc-----chhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAE-----QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~-----~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++ .++++.++.+++..++.........     .+....+..++++++++|.|+.|.........++
T Consensus       106 ~~~D-~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~  173 (190)
T d1fpwa_         106 ELYD-LNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGS  173 (190)
T ss_dssp             HHHC-SSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHH
T ss_pred             HHhc-cCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            4443 4799999999999988777654322     1223567789999999999999987777765443

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.29  E-value=0.21  Score=30.62  Aligned_cols=53  Identities=8%  Similarity=-0.073  Sum_probs=36.9

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      .++.++ .++++.++.+++..++.   +.      ..-.+.+.+++...|.|++|.-....++
T Consensus        15 ~F~~~D-~d~~G~is~~e~~~~l~---~~------~l~~~~l~~i~~~~D~d~dG~l~~~EF~   67 (95)
T d1c07a_          15 IFLKTD-KDMDGFVSGLEVREIFL---KT------GLPSTLLAHIWSLCDTKDCGKLSKDQFA   67 (95)
T ss_dssp             HHHHHC-TTCSSEECHHHHHHHHH---TT------TCCHHHHHHHHHHHCTTCSSSEETTTHH
T ss_pred             HHHHHC-CCCCCCCcHHHHHHHHH---hc------CCCHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            334443 47999999997777443   32      1235678899999999999986665554

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=87.62  E-value=0.43  Score=32.54  Aligned_cols=56  Identities=2%  Similarity=-0.068  Sum_probs=41.2

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      +.++. ++++.++.++++.++..+..       ..-.+++..++..+|.|+.|..+....+..|
T Consensus       112 ~~~D~-d~~G~Is~~El~~~l~~~g~-------~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~  167 (187)
T d1uhka1         112 DIVDK-DQNGAITLDEWKAYTKAAGI-------IQSSEDCEETFRVCDIDESGQLDVDEMTRQH  167 (187)
T ss_dssp             HHHCT-TCSSEECHHHHHHHHHHHTS-------CCSHHHHHHHHHHSCCCTTSCEEHHHHHHHH
T ss_pred             HHHcc-CCCcccchHHHHHHHHHhCC-------CccHHHHHHHHHHhCCCCCCCEeHHHHHHHH
Confidence            34443 69999999988886654422       2336679999999999999998877766433

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.95  E-value=0.45  Score=32.37  Aligned_cols=61  Identities=10%  Similarity=0.117  Sum_probs=43.3

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhc-----chhhHHHHHHHHHHHHcCCCccchhhHHHhhccccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAE-----QQKSCIETKIAQLKQELNFDSVAINQIHFAIYLFHE  220 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~-----~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~~~  220 (222)
                      .++++.++.+++..++..+......     ......++.++.+++++|.|++|..+......+.++
T Consensus        98 ~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~  163 (178)
T d1s6ca_          98 INKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE  163 (178)
T ss_dssp             TTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTS
T ss_pred             cCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            4799999999998877776554332     112233566789999999999999888877766554

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=86.76  E-value=0.16  Score=34.49  Aligned_cols=56  Identities=7%  Similarity=0.082  Sum_probs=40.2

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      .++.++ .++++.+|.+++..++..+.         .-.+++..++..+|+|+.|...+...+..+
T Consensus        99 ~F~~~D-~d~dG~Is~~E~~~~l~~~~---------~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~  154 (174)
T d2scpa_          99 FFRAVD-TNEDNNISRDEYGIFFGMLG---------LDKTMAPASFDAIDTNNDGLLSLEEFVIAG  154 (174)
T ss_dssp             HHHHHC-TTCSSSEEHHHHHHHHHHTT---------CCGGGHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred             HHHHHC-CCccccCCHHHHHHHHHHHh---------hhhHHHHHHHhhcCCCCCCcEeHHHHHHHH
Confidence            334444 37999999998888554332         113457889999999999998888776654

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.72  E-value=1.3  Score=30.09  Aligned_cols=63  Identities=6%  Similarity=-0.022  Sum_probs=44.6

Q ss_pred             HHHhhhcccCCcccCHHHHHHHHHHHHHhhh-cchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        153 WLKCIQRDVDDCLLSKAHLEILMQGMRDNIA-EQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       153 ~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~-~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      .++.++ .+++|.++.++++.++..+..... ......+++.+..+++++|.|+.|.........
T Consensus        96 ~F~~~D-~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~  159 (183)
T d2zfda1          96 SFQLYD-LKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRS  159 (183)
T ss_dssp             HHHHHC-TTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHH
T ss_pred             hhcccc-cCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence            334444 368999999999997766544322 223446677789999999999999877766543

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=85.63  E-value=0.28  Score=33.73  Aligned_cols=55  Identities=4%  Similarity=-0.125  Sum_probs=37.1

Q ss_pred             HhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhcc
Q psy14555        155 KCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYL  217 (222)
Q Consensus       155 ~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~  217 (222)
                      +.++ .++++.++.+++..++..+..       ..-.+++..++..+|.|++|.......+..
T Consensus       114 ~~~D-~d~~G~is~~E~~~~l~~~g~-------~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~  168 (189)
T d1qv0a_         114 DIFD-KDGSGTITLDEWKAYGKISGI-------SPSQEDCEATFRHCDLDNAGDLDVDEMTRQ  168 (189)
T ss_dssp             HHTC-----CEECHHHHHHHHHHHSS-------CCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred             HHHc-cCCCCcccchhhHHHHHhcCC-------CCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            4444 379999999988885444322       234677999999999999999887766543

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=85.50  E-value=0.26  Score=30.99  Aligned_cols=58  Identities=7%  Similarity=0.134  Sum_probs=40.3

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++. ++++.++.+++..++..+..    .....-.+++..+++.+|.|++|.......+.
T Consensus        46 F~~~D~-d~~G~I~~~el~~~l~~l~~----~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~  103 (107)
T d2pvba_          46 FYVIDQ-DKSGFIEEDELKLFLQNFSP----SARALTDAETKAFLADGDKDGDGMIGVDEFAA  103 (107)
T ss_dssp             HHHHCT-TCSSSBCHHHHHTGGGGTCT----TSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHhhcc-CCCCcCcHHHHHHHHHHhhc----ccccCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            344443 68999999988774333211    11234567899999999999999888776653

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.85  E-value=0.63  Score=31.91  Aligned_cols=62  Identities=15%  Similarity=0.113  Sum_probs=42.9

Q ss_pred             HHhhhcccCCcccCHHHHHHHHHHHHHhh--hcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        154 LKCIQRDVDDCLLSKAHLEILMQGMRDNI--AEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       154 ~~~~~~~~~~~~ls~~~i~~l~~~~~~~~--~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++.++ .+++|.++.+++..++..+....  .......+++-++.+++++|.|+.|..+......
T Consensus       101 F~~~D-~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~  164 (180)
T d1xo5a_         101 FRIFD-FDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH  164 (180)
T ss_dssp             HHHHC-TTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             hcccc-CCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            34444 47999999999999777663221  1122345677788999999999999877766544

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.82  E-value=0.39  Score=29.38  Aligned_cols=53  Identities=6%  Similarity=0.021  Sum_probs=36.5

Q ss_pred             HHHHHhhhcccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHh
Q psy14555        151 QVWLKCIQRDVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFA  214 (222)
Q Consensus       151 ~~~~~~~~~~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~  214 (222)
                      +..++.++  +++|.++.+++..+   +.+.      ..-.+++.+|....|.|++|.-..+.+
T Consensus        13 ~~~F~~~D--~~~G~i~~~el~~~---l~~~------gl~~~~L~~Iw~~~D~~~dG~l~~~EF   65 (95)
T d2jxca1          13 DAIFDSLS--PVNGFLSGDKVKPV---LLNS------KLPVDILGRVWELSDIDHDGMLDRDEF   65 (95)
T ss_dssp             HHHHHHTC--CBTTEEEHHHHHHH---HTTS------SCCHHHHHHHHHHHCTTCSSEEEHHHH
T ss_pred             HHHHHHhC--CCCCceeHHHHHHH---HHHc------CCCHHHHHHHHHHhcCCCCCeEcHHHH
Confidence            33445555  56799999977773   3332      123567999999999999997555544

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=81.87  E-value=0.72  Score=30.65  Aligned_cols=48  Identities=13%  Similarity=0.100  Sum_probs=35.0

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHh
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFA  214 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~  214 (222)
                      .++++.++.+++...+   .....    .....+++.++..+|.|+.|...+...
T Consensus       107 ~d~~G~Is~~e~~~~l---~~~~~----~~~~~~~~~l~~~~D~d~dG~Is~~EF  154 (162)
T d1topa_         107 KNADGFIDIEELGEIL---RATGE----HVTEEDIEDLMKDSDKNNDGRIDFDEF  154 (162)
T ss_dssp             TTCSSCBCHHHHHHHH---HTTTC----CCCHHHHHHHHHHHCTTCSSSBCHHHH
T ss_pred             CCCCCCCcHHHHHHHH---HhhCC----CCCHHHHHHHHHHhCCCCCCcEEHHHH
Confidence            3799999999877744   33322    234567899999999999988666544

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.73  E-value=0.61  Score=31.65  Aligned_cols=53  Identities=4%  Similarity=-0.006  Sum_probs=31.6

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhccc
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIYLF  218 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~~~  218 (222)
                      ...+|.++.+++..++..+....   +   ...-++.++..+|.|++|.......+.++
T Consensus        25 ~~~~G~is~~ef~~~l~~~~~~~---~---~~~~~~~lf~~~D~~~~g~I~~~EFl~~~   77 (178)
T d1s6ca_          25 ECPSGVVNEETFKQIYAQFFPHG---D---ASTYAHYLFNAFDTTQTGSVKFEDFVTAL   77 (178)
T ss_dssp             HCTTSEECHHHHHHHHHHHSTTS---C---CHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HCcCCCccHHHHHHHHHHhCCCC---C---HHHHHHHHHHHHCCCCCCcccHHHHHHHH
Confidence            34567788887766433332221   1   12335677888888888876666665543

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=80.97  E-value=0.87  Score=28.89  Aligned_cols=49  Identities=10%  Similarity=-0.069  Sum_probs=32.5

Q ss_pred             cCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhhc
Q psy14555        161 VDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAIY  216 (222)
Q Consensus       161 ~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~~  216 (222)
                      ++++.+|.+++..   .+.....    ...++++..++..+|.|++|-......+.
T Consensus        12 d~dG~is~~E~~~---~l~~~~~----~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~   60 (134)
T d1jfja_          12 NGDGAVSYEEVKA---FVSKKRA----IKNEQLLQLIFKSIDADGNGEIDQNEFAK   60 (134)
T ss_dssp             TCSSEEEHHHHHH---HHHTTCC----SSHHHHHHHHHHHHCSSCCSEEEHHHHHH
T ss_pred             CCcCCCcHHHHHH---HHHHcCC----CCCHHHHHHHHHHhhhccccccccccccc
Confidence            5888888886666   3433322    33456778888888888887766655543

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=80.92  E-value=0.83  Score=29.67  Aligned_cols=49  Identities=14%  Similarity=0.217  Sum_probs=37.2

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      .++++.++.+++...+..+...       .-.++++.+++.+|.|+.|..++...+
T Consensus        93 ~d~~G~i~~~e~~~~l~~~~~~-------~~~~~~~~i~~~~D~d~dG~i~~~eF~  141 (146)
T d1exra_          93 RDGNGLISAAELRHVMTNLGEK-------LTDDEVDEMIREADIDGDGHINYEEFV  141 (146)
T ss_dssp             TTCSSCBCHHHHHHHHHHTTCC-------CCHHHHHHHHHHHCSSSSSSBCHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHHhhc-------CCHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            3799999999888855544433       336688999999999999987776554

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.81  E-value=0.83  Score=29.37  Aligned_cols=49  Identities=10%  Similarity=0.104  Sum_probs=37.1

Q ss_pred             ccCCcccCHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHcCCCccchhhHHHhh
Q psy14555        160 DVDDCLLSKAHLEILMQGMRDNIAEQQKSCIETKIAQLKQELNFDSVAINQIHFAI  215 (222)
Q Consensus       160 ~~~~~~ls~~~i~~l~~~~~~~~~~~~~~~~~~~i~~l~~~ld~d~~g~~~~~~~~  215 (222)
                      .+..+.++.+++..++..+..       .....++..+++.+|.|+.|.......+
T Consensus        90 ~~~~G~i~~~el~~~l~~~g~-------~l~~~e~~~l~~~~D~d~dG~i~~~EF~  138 (141)
T d2obha1          90 DDETGKISFKNLKRVAKELGE-------NLTDEELQEMIDEADRDGDGEVSEQEFL  138 (141)
T ss_dssp             TTCSSSBCHHHHHHHHHHTTC-------CCCHHHHHHHHHHHCTTSSSSBCHHHHH
T ss_pred             ccCCCCccHHHHHHHHHHhCC-------CCCHHHHHHHHHHHCCCCCCCEeHHHHH
Confidence            368899999987775544332       3446789999999999999988776654