Query psy14558
Match_columns 136
No_of_seqs 139 out of 1256
Neff 8.8
Searched_HMMs 13730
Date Fri Aug 16 22:57:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14558.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14558hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zwxa1 d.151.1.3 (A:41-333) S 99.7 3.9E-16 2.8E-20 111.4 11.8 113 8-126 24-152 (293)
2 d2ddra1 d.151.1.3 (A:7-305) Sp 99.6 6.3E-15 4.6E-19 105.3 10.9 113 8-126 23-152 (299)
3 d1vyba_ d.151.1.1 (A:) Endonuc 99.2 6.2E-11 4.5E-15 82.0 11.3 100 8-123 17-117 (236)
4 d2imqx1 d.151.1.2 (X:3-282) Sa 98.9 2.1E-09 1.6E-13 76.0 8.3 110 11-125 21-139 (280)
5 d1wdua_ d.151.1.1 (A:) Endonuc 98.9 1.1E-08 8.1E-13 69.9 10.6 100 4-123 8-110 (228)
6 d2f1na1 d.151.1.1 (A:1-250) Cy 98.8 4.3E-09 3.1E-13 73.1 5.7 46 63-124 96-141 (250)
7 d1sr4b_ d.151.1.1 (B:) Cytolet 98.5 7.6E-08 5.5E-12 66.2 5.5 97 12-122 24-141 (261)
8 d1akoa_ d.151.1.1 (A:) DNA-rep 98.4 8.1E-07 5.9E-11 60.2 8.5 29 8-36 10-38 (268)
9 d1hd7a_ d.151.1.1 (A:) DNA rep 98.3 1.5E-06 1.1E-10 60.3 8.5 64 10-75 30-98 (275)
10 d2a40b1 d.151.1.1 (B:1-260) De 98.2 3.7E-06 2.7E-10 56.1 9.0 107 11-123 20-138 (260)
11 d1i9za_ d.151.1.2 (A:) Synapto 98.1 4.3E-06 3.2E-10 61.4 7.6 102 16-123 43-170 (345)
12 d1b74a1 c.78.2.1 (A:1-105) Glu 55.4 9.8 0.00071 22.0 4.3 29 2-30 37-68 (105)
13 d1emsa2 d.160.1.1 (A:10-280) N 47.5 6.4 0.00047 25.9 2.9 29 7-35 17-48 (271)
14 d1f89a_ d.160.1.1 (A:) hypothe 47.2 4.7 0.00034 26.7 2.1 29 6-34 21-54 (281)
15 d3bzka5 c.55.3.13 (A:325-473) 44.4 12 0.00089 22.9 3.7 22 9-30 44-65 (149)
16 d1xrsb1 c.23.6.1 (B:102-261) D 43.8 8.3 0.0006 24.0 2.8 24 12-35 67-90 (160)
17 d3bula2 c.23.6.1 (A:741-896) M 43.4 6.1 0.00045 24.5 2.1 25 12-36 45-69 (156)
18 d1ccwa_ c.23.6.1 (A:) Glutamat 42.2 6.6 0.00048 23.7 2.1 25 13-37 43-67 (137)
19 d1kp0a1 c.55.2.1 (A:1-156) Cre 40.5 7.9 0.00057 23.2 2.3 29 2-30 17-45 (156)
20 d7reqa2 c.23.6.1 (A:561-728) M 37.3 4.3 0.00031 25.6 0.6 39 10-48 74-114 (168)
21 d1g6oa_ c.37.1.11 (A:) Hexamer 35.6 17 0.0012 25.0 3.7 35 13-48 224-258 (323)
22 d1chma1 c.55.2.1 (A:2-156) Cre 34.5 14 0.0011 22.0 2.8 24 7-30 21-44 (155)
23 d2jrxa1 a.284.1.1 (A:1-75) Unc 31.4 19 0.0014 19.4 2.6 19 2-20 1-19 (75)
24 d1assa_ c.8.5.2 (A:) Thermosom 30.9 25 0.0018 21.2 3.5 27 9-35 57-83 (152)
25 d2jpqa1 a.284.1.1 (A:1-75) Hyp 29.8 20 0.0014 19.4 2.4 19 2-20 1-19 (75)
26 d2juza1 a.284.1.1 (A:1-72) Unc 29.7 20 0.0015 19.1 2.5 19 2-20 1-19 (72)
27 d1j31a_ d.160.1.2 (A:) Hypothe 28.7 16 0.0012 23.7 2.5 29 7-35 14-45 (262)
28 d1q77a_ c.26.2.4 (A:) Hypothet 28.6 21 0.0016 20.1 2.8 19 12-30 97-115 (138)
29 d1a6db2 c.8.5.2 (B:216-367) Th 27.9 30 0.0022 20.8 3.5 27 9-35 55-81 (152)
30 d1gmla_ c.8.5.2 (A:) Thermosom 26.8 35 0.0025 20.8 3.7 26 10-35 62-87 (168)
31 d1q3qa2 c.8.5.2 (A:217-369) Th 25.6 25 0.0018 21.2 2.8 27 9-35 56-82 (153)
32 d1jmva_ c.26.2.4 (A:) Universa 25.4 26 0.0019 19.9 2.8 19 12-30 90-108 (140)
33 d2z3va1 c.26.2.4 (A:2-136) Hyp 24.7 25 0.0018 19.9 2.6 19 13-31 87-105 (135)
34 d1hjra_ c.55.3.6 (A:) RuvC res 23.4 25 0.0018 21.4 2.4 28 9-36 40-71 (158)
35 d1uf5a_ d.160.1.2 (A:) N-carba 22.9 24 0.0017 23.3 2.5 28 7-34 18-48 (303)
36 d1p9ra_ c.37.1.11 (A:) Extrace 20.8 32 0.0023 24.2 2.9 26 12-37 215-240 (401)
37 d1vdma1 c.61.1.1 (A:1-153) Ppr 20.6 30 0.0022 20.6 2.4 22 8-29 10-31 (153)
No 1
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}
Probab=99.67 E-value=3.9e-16 Score=111.44 Aligned_cols=113 Identities=22% Similarity=0.272 Sum_probs=82.1
Q ss_pred ChHHHHHHHHHHHhcCCCcEEEEeeecCCCchHHHHHHHHhcCCceEEEccc----------------CCCccEEEEecC
Q psy14558 8 DRDIRIRAIAAELACNKYDIVCLQEVWKNDDFELIKSVVFEALPYAHYFYSG----------------VMGSGVCILSRY 71 (136)
Q Consensus 8 ~~~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~~l~~~l~~~~~y~~~~~~~----------------~~g~GvailSr~ 71 (136)
..+.|++.|++.|+..+|||||||||......+.+.+.+...|++....... ..+.|++|+||+
T Consensus 24 ~~~~r~~~i~~~i~~~~~DVi~LQEv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ilsr~ 103 (293)
T d1zwxa1 24 GQMHRADLIAQADYMKNNDVVILNEAFDTSASHRLLNNLREMYPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVVSQW 103 (293)
T ss_dssp CHHHHHHHHHTSGGGSSCSEEEEEEECSHHHHHHHHHHTTTTCCEECCCTTSCSTTCSEEEC-----CCBCCCCEEEESS
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEccCCcchHHHHHHHHhhhccceehhcccccccccccccccccccccccceEEEecc
Confidence 4578899999999999999999999987654455555665555542211100 013689999999
Q ss_pred ccceeeEeeeccCCccceeecCcccCCcceEEEEEEECCEEEEEEEecCCCCCCC
Q psy14558 72 EITEVLFHQWQLNGYIHKIFHADWFGGKGVGLCQVLVNGFRLNVYTTHVSISWVI 126 (136)
Q Consensus 72 pi~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~v~~~g~~i~v~~tHl~~~~~~ 126 (136)
|+.....+.++.... .++...++++.+.+.++|..++|+|+||.+..+.
T Consensus 104 pi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~ 152 (293)
T d1zwxa1 104 PIVEKSQHIFQRGGG------ADRLSNKGFAYVKIMKNGKPYHIIGTHTQADDSL 152 (293)
T ss_dssp CEEEEEEEECSCCCG------GGGGBCCEEEEEEEEETTEEEEEEEEECCCCCTT
T ss_pred Ccccceeeeeecccc------ccccccceEEEEEEecCCceEEEEEeeeeccCCc
Confidence 999877665554332 2334568899999999999999999999985443
No 2
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
Probab=99.58 E-value=6.3e-15 Score=105.29 Aligned_cols=113 Identities=20% Similarity=0.207 Sum_probs=80.2
Q ss_pred ChHHHHHHHHHHHhcCCCcEEEEeeecCCCchHHHHHHHHhcCCceEEEccc-----------------CCCccEEEEec
Q psy14558 8 DRDIRIRAIAAELACNKYDIVCLQEVWKNDDFELIKSVVFEALPYAHYFYSG-----------------VMGSGVCILSR 70 (136)
Q Consensus 8 ~~~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~~l~~~l~~~~~y~~~~~~~-----------------~~g~GvailSr 70 (136)
....|.+.|++.|...+|||||||||......+.+...+.+.++|....... ..+.|++++||
T Consensus 23 ~~~~r~~~i~~~i~~~~~DIi~LQEv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~ 102 (299)
T d2ddra1 23 GQTERADLIGAADYIKNQDVVILNEVFDNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSK 102 (299)
T ss_dssp CHHHHHHHHHHCSTTCSCSEEEEEEECCHHHHHHHHHHHTTTCCEECCCTTSCCSTTSSEEEESCCTTCSSCCCCEEEES
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEccCCcchHHHHHHHHHHhcCceeeecccccccccceeeecccccccccceeEEEEE
Confidence 3678899999999999999999999987654455666677777763221100 01369999999
Q ss_pred CccceeeEeeeccCCccceeecCcccCCcceEEEEEEECCEEEEEEEecCCCCCCC
Q psy14558 71 YEITEVLFHQWQLNGYIHKIFHADWFGGKGVGLCQVLVNGFRLNVYTTHVSISWVI 126 (136)
Q Consensus 71 ~pi~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~v~~~g~~i~v~~tHl~~~~~~ 126 (136)
+|+.....+....... .++...++++.+.+..++..++|+|+||.+..+.
T Consensus 103 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~ 152 (299)
T d2ddra1 103 WPIAEKIQYVFAKGCG------PDNLSNKGFVYTKIKKNDRFVHVIGTHLQAEDSM 152 (299)
T ss_dssp SCEEEEEEEECSCCC----------CCCCEEEEEEEEETTEEEEEEEEECCCC---
T ss_pred eecccceeeeeecccC------cccccceeEEEEEEecCCeEEEEEEccccCCCCc
Confidence 9998876665543322 2334467888888899999999999999986543
No 3
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=6.2e-11 Score=82.02 Aligned_cols=100 Identities=12% Similarity=0.084 Sum_probs=63.6
Q ss_pred ChHHHHHHHHHHHhcCCCcEEEEeeecCCCchHHHHHHHHhcCCceEEEcccC-CCccEEEEecCccceeeEeeeccCCc
Q psy14558 8 DRDIRIRAIAAELACNKYDIVCLQEVWKNDDFELIKSVVFEALPYAHYFYSGV-MGSGVCILSRYEITEVLFHQWQLNGY 86 (136)
Q Consensus 8 ~~~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~~l~~~l~~~~~y~~~~~~~~-~g~GvailSr~pi~~~~~~~~~~~~~ 86 (136)
+...+...|.++|++.+||||||||+...... ........+.| .+..... ...|+||+||+|+...... +....
T Consensus 17 ~~~~~~~~i~~~i~~~~~DIi~LQE~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~g~~i~~k~~~~~~~~~-~~~~~- 91 (236)
T d1vyba_ 17 NSAIKRHRLASWIKSQDPSVCCIQETHLTCRD--THRLKIKGWRK-IYQANGKQKKAGVAILVSDKTDFKPTK-IKRDK- 91 (236)
T ss_dssp CSHHHHHHHHHHHHHHCCSEEEEECCCCCTTS--GGGCCCTTCCE-EEEECCSSSSCCEEEEECTTCCCEEEE-EEECT-
T ss_pred cchhhHHHHHHHHHHCCCeEEEEEcccCcccc--chhhhhcccce-EEEeeccccccceeeEeeccccccccc-ccccc-
Confidence 44557788999999999999999998643211 11111122233 2222222 2379999999998653221 11111
Q ss_pred cceeecCcccCCcceEEEEEEECCEEEEEEEecCCCC
Q psy14558 87 IHKIFHADWFGGKGVGLCQVLVNGFRLNVYTTHVSIS 123 (136)
Q Consensus 87 ~~~~~~~~~~~~r~~~~~~v~~~g~~i~v~~tHl~~~ 123 (136)
......+.+..++..++++|+|+...
T Consensus 92 -----------~~~~~~~~~~~~~~~~~~~~~y~~~~ 117 (236)
T d1vyba_ 92 -----------EGHYIMVKGSIQQEELTILNIYAPNT 117 (236)
T ss_dssp -----------TSSEEEEEEEETTEEEEEEEEECCSS
T ss_pred -----------cccceeeeeeeccCcceeEEeccccc
Confidence 13466778888899999999998653
No 4
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]}
Probab=98.91 E-value=2.1e-09 Score=76.02 Aligned_cols=110 Identities=12% Similarity=-0.015 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhcCCCcE--EEEeeecCCCch----HHHHHHH---HhcCCceEEEcccCCCccEEEEecCccceeeEeee
Q psy14558 11 IRIRAIAAELACNKYDI--VCLQEVWKNDDF----ELIKSVV---FEALPYAHYFYSGVMGSGVCILSRYEITEVLFHQW 81 (136)
Q Consensus 11 ~r~~~i~~~i~~~~pDI--i~LQEv~~~~~~----~~l~~~l---~~~~~y~~~~~~~~~g~GvailSr~pi~~~~~~~~ 81 (136)
.+++.+.+.+.+.+||| |||||+...... ......+ ....+|.........+.|+++++|.++........
T Consensus 21 ~~~~~~l~~i~~~~pDI~vI~lQE~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (280)
T d2imqx1 21 TNLEELLGLNSGETPDVIAVAVQGFGFQTDKPQQGPACVKNFQSLLTSKGYTKLKNTITETMGLTVYCLEKHLDQNTLKN 100 (280)
T ss_dssp SCCHHHHTCTTSCCCSEEEEEEEESCTTTCTTCCHHHHHHHHHHHHHHTTEEEEEEEECSSEEEEEEEEGGGCCTTTCCC
T ss_pred cCHHHHhcccccCCCCEEEEEeEecCccccccchhHHHHHHHHHHhccCCeeEEEeeeeeceEEEEEEcccccccceecc
Confidence 34667888889999997 899998654321 1111111 12345532222223458999999988764211100
Q ss_pred ccCCccceeecCcccCCcceEEEEEEECCEEEEEEEecCCCCCC
Q psy14558 82 QLNGYIHKIFHADWFGGKGVGLCQVLVNGFRLNVYTTHVSISWV 125 (136)
Q Consensus 82 ~~~~~~~~~~~~~~~~~r~~~~~~v~~~g~~i~v~~tHl~~~~~ 125 (136)
. ...........++.+.+++.+.|..+.|+|+|+.+...
T Consensus 101 ---~--~~~~~~~~~~~~~~v~~~~~i~~~~~~~in~hl~~~~~ 139 (280)
T d2imqx1 101 ---E--TIIVTVDDQKKSGGIVTSFTIYNKRFSFTTSRMSDEDV 139 (280)
T ss_dssp ---E--EEEEECSTTSCSEEEEEEEEETTEEEEEEEEECCTTCC
T ss_pred ---e--eEeccCCcccCCcEEEEEEEECCEEEEeecccCCccch
Confidence 0 00111222345788999999999999999999987543
No 5
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
Probab=98.87 E-value=1.1e-08 Score=69.86 Aligned_cols=100 Identities=11% Similarity=0.006 Sum_probs=64.6
Q ss_pred ccccChHHHHHHHHHHHhcCCCcEEEEeeecCCCchHHHHHHHHhcCCceEEEccc---CCCccEEEEecCccceeeEee
Q psy14558 4 KVSKDRDIRIRAIAAELACNKYDIVCLQEVWKNDDFELIKSVVFEALPYAHYFYSG---VMGSGVCILSRYEITEVLFHQ 80 (136)
Q Consensus 4 ~~s~~~~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~~l~~~l~~~~~y~~~~~~~---~~g~GvailSr~pi~~~~~~~ 80 (136)
|+.+..+.+.+.++..|.+.+||||||||+...... .+...-+| .++... ....|.+++++.+.......
T Consensus 8 ~Nv~~~~~~~~~l~~~i~~~~~DIi~lQE~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 80 (228)
T d1wdua_ 8 ANLQRKKLATAELAIEAATRKAAIALIQEPYVGGAK-----SMKGFRGV-RVFQSTAQGDGTVKAAIAVFDHDLDVIQY- 80 (228)
T ss_dssp EECTTCHHHHHHHHHHHHHHTCSEEEEESCCC-----------CCCSSC-EEEECCCCTTCCCCEEEEECCSSCEEEEC-
T ss_pred eccCCChHHHHHHHHHHHhcCCCEEEEECCCcCCCC-----ccccccce-EEEeccCCCCCCcceEEEEEccccceecc-
Confidence 445667788899999999999999999998654321 12111223 233222 22377888888877654332
Q ss_pred eccCCccceeecCcccCCcceEEEEEEECCEEEEEEEecCCCC
Q psy14558 81 WQLNGYIHKIFHADWFGGKGVGLCQVLVNGFRLNVYTTHVSIS 123 (136)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~r~~~~~~v~~~g~~i~v~~tHl~~~ 123 (136)
+.. ..+....+.+..++++++++|+|+.++
T Consensus 81 -~~~------------~~~~~~~~~i~~~~~~i~v~~~y~~~~ 110 (228)
T d1wdua_ 81 -PQL------------TTNNIVVVGIRTRAWEITLVSYYFEPD 110 (228)
T ss_dssp -TTT------------CCSSEEEEEEECSSCEEEEEEEECCTT
T ss_pred -cCC------------CCCCEEEEEEEcCCccEEEEEEEeCCc
Confidence 111 134677788888889999999998764
No 6
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]}
Probab=98.77 E-value=4.3e-09 Score=73.15 Aligned_cols=46 Identities=15% Similarity=0.121 Sum_probs=32.8
Q ss_pred ccEEEEecCccceeeEeeeccCCccceeecCcccCCcceEEEEEEECCEEEEEEEecCCCCC
Q psy14558 63 SGVCILSRYEITEVLFHQWQLNGYIHKIFHADWFGGKGVGLCQVLVNGFRLNVYTTHVSISW 124 (136)
Q Consensus 63 ~GvailSr~pi~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~v~~~g~~i~v~~tHl~~~~ 124 (136)
.|++++||+|+.......++.. ..|+++.+++ +.+.|+|+||.+..
T Consensus 96 ~g~~i~s~~~~~~~~~~~~~~~------------~~r~~~~~~~----~~~~v~n~Hl~~~~ 141 (250)
T d2f1na1 96 VNLALVSNRRADEVFVLSPVRQ------------GGRPLLGIRI----GNDAFFTAHAIAMR 141 (250)
T ss_dssp SCEEEEESSCCSEEEEECCSST------------TCCCEEEEEE----TTEEEEEEECCSSS
T ss_pred cceEEEECCccceeEecCCCcc------------cccceeeEee----ceEEEEEEEcCCCC
Confidence 6999999999987655443322 2366666654 57899999998754
No 7
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]}
Probab=98.49 E-value=7.6e-08 Score=66.23 Aligned_cols=97 Identities=18% Similarity=0.130 Sum_probs=51.3
Q ss_pred HHHHHHHHHhcCCCcEEEEeeecCCCchHHHHHHHHhc--CCceEEE---------------ccc----CCCccEEEEec
Q psy14558 12 RIRAIAAELACNKYDIVCLQEVWKNDDFELIKSVVFEA--LPYAHYF---------------YSG----VMGSGVCILSR 70 (136)
Q Consensus 12 r~~~i~~~i~~~~pDIi~LQEv~~~~~~~~l~~~l~~~--~~y~~~~---------------~~~----~~g~GvailSr 70 (136)
+......+++..+||||||||+............+... +.+..+. ... ....|++++|+
T Consensus 24 ~~~~~~~~~~~~~~DIi~LQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ls~ 103 (261)
T d1sr4b_ 24 NINVRQLLSGEQGADILMVQEAGSLPSSAVRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANRVNLAIVSR 103 (261)
T ss_dssp HHHHHHHHCSTTCCSEEEEESCCSCCTTCEECSCCCCCSSSCCEEEEEESSCSSSCCEEEEEEECCCTTTSCSCEEEEES
T ss_pred cHHHHHHHHhcCCCCEEEEEccCcccccchHHHHHHhhhCccceeeeeccccccCCceeEEEeeccccccceeeeEEEeC
Confidence 44455567788999999999997643211011111111 1221111 100 01269999999
Q ss_pred CccceeeEeeeccCCccceeecCcccCCcceEEEEEEECCEEEEEEEecCCC
Q psy14558 71 YEITEVLFHQWQLNGYIHKIFHADWFGGKGVGLCQVLVNGFRLNVYTTHVSI 122 (136)
Q Consensus 71 ~pi~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~v~~~g~~i~v~~tHl~~ 122 (136)
+|+.......+.... ..+|.++.+.+ . ...++++|+..
T Consensus 104 ~~~~~~~~~~~~~~~----------~~~r~~~~~~~--~--~~~~~~~~~~~ 141 (261)
T d1sr4b_ 104 RQADEAFIVHSDSSV----------LQSRPAVGIRI--G--TDVFFTVHALA 141 (261)
T ss_dssp SCCSEEEEECCCCCS----------SCCCCEEEEEE--T--TEEEEEEECCT
T ss_pred CCcccceeccCCCcc----------cccceEEEEEE--e--cccceEEEEee
Confidence 999876554332221 12355655554 2 24456777665
No 8
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]}
Probab=98.38 E-value=8.1e-07 Score=60.21 Aligned_cols=29 Identities=21% Similarity=0.181 Sum_probs=24.7
Q ss_pred ChHHHHHHHHHHHhcCCCcEEEEeeecCC
Q psy14558 8 DRDIRIRAIAAELACNKYDIVCLQEVWKN 36 (136)
Q Consensus 8 ~~~~r~~~i~~~i~~~~pDIi~LQEv~~~ 36 (136)
..+.|.+.+.++|++.+||||||||+...
T Consensus 10 G~r~r~~~i~~~i~~~~~DIi~LQEv~~~ 38 (268)
T d1akoa_ 10 GLRARPHQLEAIVEKHQPDVIGLQETKVH 38 (268)
T ss_dssp CGGGCHHHHHHHHHHHCCSEEEEECCCCC
T ss_pred CHHHhHHHHHHHHHHCCCCEEEEEeeecC
Confidence 33568889999999999999999999654
No 9
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30 E-value=1.5e-06 Score=60.33 Aligned_cols=64 Identities=25% Similarity=0.252 Sum_probs=31.7
Q ss_pred HHH-HHHHHHHHhcCCCcEEEEeeecCCCchHHHHHHHHhcCCceEEEc---ccCCC-ccEEEEecCccce
Q psy14558 10 DIR-IRAIAAELACNKYDIVCLQEVWKNDDFELIKSVVFEALPYAHYFY---SGVMG-SGVCILSRYEITE 75 (136)
Q Consensus 10 ~~r-~~~i~~~i~~~~pDIi~LQEv~~~~~~~~l~~~l~~~~~y~~~~~---~~~~g-~GvailSr~pi~~ 75 (136)
+.+ .+.++++|++.+||||||||+..... .+...+....+|.+... .+..+ .|++++++.....
T Consensus 30 r~~~~~~~~~~i~~~~pDIi~LQE~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (275)
T d1hd7a_ 30 RAWIKKKGLDWVKEEAPDILCLQETKCSEN--KLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLK 98 (275)
T ss_dssp HHHHHTTHHHHHHHHCCSEEEEECCCCCC-------------CCCEEEEECC-----CCCEEEEESSCCSE
T ss_pred HhhhhccHHHHHHhCCCCEEEEEccccChh--hCCHHHHhccCcceeeeeeecccccccccceecccCcee
Confidence 444 34577999999999999999854321 13333433334433222 22233 6677776655444
No 10
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.23 E-value=3.7e-06 Score=56.06 Aligned_cols=107 Identities=18% Similarity=0.062 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhcCCCcEEEEeeecCCCch--HHHHHHHHhcCC-ceEEEcccC-----CCccEEEEecCccceeeEeeec
Q psy14558 11 IRIRAIAAELACNKYDIVCLQEVWKNDDF--ELIKSVVFEALP-YAHYFYSGV-----MGSGVCILSRYEITEVLFHQWQ 82 (136)
Q Consensus 11 ~r~~~i~~~i~~~~pDIi~LQEv~~~~~~--~~l~~~l~~~~~-y~~~~~~~~-----~g~GvailSr~pi~~~~~~~~~ 82 (136)
++++.|++.+ .+|||||||||...... ..+...+....+ +..+..... .+.+.+++.+.+..........
T Consensus 20 ~~~~~l~~~i--~~~DIi~LQEv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (260)
T d2a40b1 20 TLASYIVRIV--RRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQY 97 (260)
T ss_dssp HHHHHHHHHH--TTCSEEEEEEECCTTSHHHHHHHHHHTSSSTTSCEEEECCCBCSSSCCBEEEEEECTTTCEEEEEEEC
T ss_pred HHHHHHHHHc--CCCCEEEEEeeecCCchhHHHHHHhhhhcccCcceeEecccCCCCccccceeeeecccccceecccee
Confidence 4455566655 48999999999876422 122222222222 212222211 2367888888776544332221
Q ss_pred c-CCccceeecCcccCCcceEEEEEEE---CCEEEEEEEecCCCC
Q psy14558 83 L-NGYIHKIFHADWFGGKGVGLCQVLV---NGFRLNVYTTHVSIS 123 (136)
Q Consensus 83 ~-~~~~~~~~~~~~~~~r~~~~~~v~~---~g~~i~v~~tHl~~~ 123 (136)
. ...... .. ...+....+.... ....+.+++.|+.+.
T Consensus 98 ~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (260)
T d2a40b1 98 DDGCESCG---ND-SFSREPAVVKFSSHSTKVKEFAIVALHSAPS 138 (260)
T ss_dssp CTTSTTTH---HH-HCSSCCEEEEEECTTSSSSEEEEEECCCCGG
T ss_pred ccccccCc---cc-cccccceeeeeecccccceEEEEEeeccccc
Confidence 1 110000 00 0123333333333 247899999998764
No 11
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.10 E-value=4.3e-06 Score=61.43 Aligned_cols=102 Identities=17% Similarity=0.165 Sum_probs=58.0
Q ss_pred HHHHHh---cCCCcE--EEEeeecCCCc-------------h-HHHHHHHH----hcCCceEEEcccCCCccEEEEecCc
Q psy14558 16 IAAELA---CNKYDI--VCLQEVWKNDD-------------F-ELIKSVVF----EALPYAHYFYSGVMGSGVCILSRYE 72 (136)
Q Consensus 16 i~~~i~---~~~pDI--i~LQEv~~~~~-------------~-~~l~~~l~----~~~~y~~~~~~~~~g~GvailSr~p 72 (136)
+.++|. ...||| |||||+..... + ..+...+. ....|.........|.+++|++|-+
T Consensus 43 l~~~l~~~~~~~~DI~viglQEi~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~Y~~v~~~~~~g~~l~vf~r~~ 122 (345)
T d1i9za_ 43 LENWLFPENTPLADIYVVGFQEIVQLTPQQVISADPAKRREWESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKES 122 (345)
T ss_dssp CHHHHSCSSSCCCSEEEEEEECSSCCC-----CCCHHHHHHHHHHHHHHHHHTCCSSCCEEEEEEEEETTEEEEEEEEGG
T ss_pred hHHhhccCCCCCCCEEEEEcccCCccchhhhcccCchhhHHHHHHHHHhccccccCCCCeEEEEEecccCcEEEEEEcch
Confidence 456664 445898 77999754211 0 11112221 1345532222222468899999988
Q ss_pred cceeeE-eee--ccCCccceeecCcccCCcceEEEEEEECCEEEEEEEecCCCC
Q psy14558 73 ITEVLF-HQW--QLNGYIHKIFHADWFGGKGVGLCQVLVNGFRLNVYTTHVSIS 123 (136)
Q Consensus 73 i~~~~~-~~~--~~~~~~~~~~~~~~~~~r~~~~~~v~~~g~~i~v~~tHl~~~ 123 (136)
+..... +.. -..+ ......++|++.+++.+.+..++|+|+||.+.
T Consensus 123 ~~~~i~~v~~~~~~~g------~~g~~gnKGaV~vr~~i~~t~l~fvn~HL~ag 170 (345)
T d1i9za_ 123 CLPSIKNVEGTVKKTG------LGGVSGNKGAVAIRFDYEDTGLCFITSHLAAG 170 (345)
T ss_dssp GGGGEEEEEEEEEECC------CC----CCEEEEEEEEETTEEEEEEEEECCCC
T ss_pred hccccccceeEEEecC------cCCcccCCceEEEEEEECCEEEEEEEecccCc
Confidence 754211 111 1111 11223469999999999999999999999884
No 12
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}
Probab=55.44 E-value=9.8 Score=22.04 Aligned_cols=29 Identities=17% Similarity=0.093 Sum_probs=24.0
Q ss_pred CCccccCh---HHHHHHHHHHHhcCCCcEEEE
Q psy14558 2 IPKVSKDR---DIRIRAIAAELACNKYDIVCL 30 (136)
Q Consensus 2 ~~~~s~~~---~~r~~~i~~~i~~~~pDIi~L 30 (136)
+||..+.. .++...+++++.+.++|.|++
T Consensus 37 ~PYG~ks~~~I~~~~~~~~~~l~~~~~~~iVi 68 (105)
T d1b74a1 37 VPYGIRSKDTIIRYSLECAGFLKDKGVDIIVV 68 (105)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHHHTTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 68888653 567888999999999999987
No 13
>d1emsa2 d.160.1.1 (A:10-280) NIT-FHIT fusion protein, N-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=47.49 E-value=6.4 Score=25.94 Aligned_cols=29 Identities=21% Similarity=0.326 Sum_probs=21.2
Q ss_pred cChHHHHHHHHHHHh---cCCCcEEEEeeecC
Q psy14558 7 KDRDIRIRAIAAELA---CNKYDIVCLQEVWK 35 (136)
Q Consensus 7 ~~~~~r~~~i~~~i~---~~~pDIi~LQEv~~ 35 (136)
.+...+++.+.+.|+ +.++|||+|-|...
T Consensus 17 ~d~~~N~~~i~~~i~~A~~~gadlvvfPE~~~ 48 (271)
T d1emsa2 17 NDLEKNFQAAKNMIERAGEKKCEMVFLPECFD 48 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEECTTCS
T ss_pred CCHHHHHHHHHHHHHHHHHCcCeEEECCcccc
Confidence 466666666666654 58999999999753
No 14
>d1f89a_ d.160.1.1 (A:) hypothetical protein yl85 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=47.23 E-value=4.7 Score=26.72 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=20.5
Q ss_pred ccChHHHHHHHHHHHhc-----CCCcEEEEeeec
Q psy14558 6 SKDRDIRIRAIAAELAC-----NKYDIVCLQEVW 34 (136)
Q Consensus 6 s~~~~~r~~~i~~~i~~-----~~pDIi~LQEv~ 34 (136)
..+...+++.+.+.|++ .++|+|+|.|+.
T Consensus 21 ~~D~~~N~~~~~~~i~~A~~~~~~a~lvv~PE~~ 54 (281)
T d1f89a_ 21 SPDKMANLQRAATFIERAMKEQPDTKLVVLPECF 54 (281)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTT
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCcc
Confidence 45666777776666654 267899999964
No 15
>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=44.45 E-value=12 Score=22.92 Aligned_cols=22 Identities=18% Similarity=0.300 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHhcCCCcEEEE
Q psy14558 9 RDIRIRAIAAELACNKYDIVCL 30 (136)
Q Consensus 9 ~~~r~~~i~~~i~~~~pDIi~L 30 (136)
.....+.+.+++++++||+|++
T Consensus 44 ~~~a~~~l~~li~k~~p~vIaI 65 (149)
T d3bzka5 44 WDQTLAVLAALCAKHQVELIAI 65 (149)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEE
Confidence 4555678999999999999999
No 16
>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=43.76 E-value=8.3 Score=23.99 Aligned_cols=24 Identities=4% Similarity=-0.013 Sum_probs=20.2
Q ss_pred HHHHHHHHHhcCCCcEEEEeeecC
Q psy14558 12 RIRAIAAELACNKYDIVCLQEVWK 35 (136)
Q Consensus 12 r~~~i~~~i~~~~pDIi~LQEv~~ 35 (136)
-.+.+++.+.+.+||+|+|.=+-.
T Consensus 67 p~e~~v~~a~e~~~d~VglS~l~t 90 (160)
T d1xrsb1 67 ANEDFIKKAVELEADVLLVSQTVT 90 (160)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCC
T ss_pred CHHHHHHHHHhcCCCEEEEeeccc
Confidence 467889999999999999987644
No 17
>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=43.38 E-value=6.1 Score=24.49 Aligned_cols=25 Identities=12% Similarity=0.048 Sum_probs=20.8
Q ss_pred HHHHHHHHHhcCCCcEEEEeeecCC
Q psy14558 12 RIRAIAAELACNKYDIVCLQEVWKN 36 (136)
Q Consensus 12 r~~~i~~~i~~~~pDIi~LQEv~~~ 36 (136)
-.+.+++.+++.+||+|+|.=.-..
T Consensus 45 p~e~~~~~~~~~~~d~i~lS~l~~~ 69 (156)
T d3bula2 45 PAEKILRTAKEVNADLIGLSGLITP 69 (156)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCSTH
T ss_pred CHHHHHHHHHhhCCCEEEEeccccc
Confidence 3567899999999999999877654
No 18
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=42.23 E-value=6.6 Score=23.70 Aligned_cols=25 Identities=8% Similarity=0.094 Sum_probs=20.8
Q ss_pred HHHHHHHHhcCCCcEEEEeeecCCC
Q psy14558 13 IRAIAAELACNKYDIVCLQEVWKND 37 (136)
Q Consensus 13 ~~~i~~~i~~~~pDIi~LQEv~~~~ 37 (136)
.+.+++.+.+.+||+|++.=....+
T Consensus 43 ~e~iv~a~~~~~~d~v~lS~~~~~~ 67 (137)
T d1ccwa_ 43 QELFIKAAIETKADAILVSSLYGQG 67 (137)
T ss_dssp HHHHHHHHHHHTCSEEEEEECSSTH
T ss_pred HHHHHHHHHhcCCCEEEEeeccccc
Confidence 5678899999999999998776653
No 19
>d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]}
Probab=40.53 E-value=7.9 Score=23.25 Aligned_cols=29 Identities=21% Similarity=0.156 Sum_probs=24.6
Q ss_pred CCccccChHHHHHHHHHHHhcCCCcEEEE
Q psy14558 2 IPKVSKDRDIRIRAIAAELACNKYDIVCL 30 (136)
Q Consensus 2 ~~~~s~~~~~r~~~i~~~i~~~~pDIi~L 30 (136)
+|+-......|.+++-+.+++.+.|.+++
T Consensus 17 ~pFs~~E~~~R~~klr~~M~e~~iDalli 45 (156)
T d1kp0a1 17 TPFSZAEMTRRZBRLRAWMAKSBIDAVLF 45 (156)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 45544567899999999999999999998
No 20
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=37.28 E-value=4.3 Score=25.65 Aligned_cols=39 Identities=5% Similarity=-0.077 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeeecCCCc--hHHHHHHHHh
Q psy14558 10 DIRIRAIAAELACNKYDIVCLQEVWKNDD--FELIKSVVFE 48 (136)
Q Consensus 10 ~~r~~~i~~~i~~~~pDIi~LQEv~~~~~--~~~l~~~l~~ 48 (136)
....+.+++...+.+||+||+.=....+. ...+.+.|.+
T Consensus 74 ~~~~e~iv~aa~~~~advI~iSs~~~~~~~~~~~l~~~L~~ 114 (168)
T d7reqa2 74 FQTPEETARQAVEADVHVVGVSSLAGGHLTLVPALRKELDK 114 (168)
T ss_dssp TBCHHHHHHHHHHHTCSEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHccCCCEEEEecCcccchHHHHHHHHHHHh
Confidence 34567889999999999999996554431 1334445543
No 21
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=35.56 E-value=17 Score=25.00 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=24.0
Q ss_pred HHHHHHHHhcCCCcEEEEeeecCCCchHHHHHHHHh
Q psy14558 13 IRAIAAELACNKYDIVCLQEVWKNDDFELIKSVVFE 48 (136)
Q Consensus 13 ~~~i~~~i~~~~pDIi~LQEv~~~~~~~~l~~~l~~ 48 (136)
+..+.+...+.+||.|++.|+.....++.+ +.+..
T Consensus 224 ~~~ll~~~lR~~pd~iivgEiR~~ea~~~l-~a~~t 258 (323)
T d1g6oa_ 224 SADCLKSCLRMRPDRIILGELRSSEAYDFY-NVLCS 258 (323)
T ss_dssp HHHHHHHHTTSCCSEEEESCCCSTHHHHHH-HHHHT
T ss_pred HHHHHHHHhccCCCcccCCccCchhHHHHH-HHHHh
Confidence 455666777899999999999976444333 34433
No 22
>d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]}
Probab=34.48 E-value=14 Score=21.97 Aligned_cols=24 Identities=21% Similarity=0.261 Sum_probs=21.7
Q ss_pred cChHHHHHHHHHHHhcCCCcEEEE
Q psy14558 7 KDRDIRIRAIAAELACNKYDIVCL 30 (136)
Q Consensus 7 ~~~~~r~~~i~~~i~~~~pDIi~L 30 (136)
...+.|++++.+.+++.+.|.+++
T Consensus 21 ~E~~~Rl~klr~~m~~~giDalli 44 (155)
T d1chma1 21 QEYANRQARLRAHLAAENIDAAIF 44 (155)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEE
Confidence 456889999999999999999998
No 23
>d2jrxa1 a.284.1.1 (A:1-75) Uncharacterized protein YejL {Escherichia coli [TaxId: 562]}
Probab=31.43 E-value=19 Score=19.39 Aligned_cols=19 Identities=32% Similarity=0.614 Sum_probs=15.1
Q ss_pred CCccccChHHHHHHHHHHH
Q psy14558 2 IPKVSKDRDIRIRAIAAEL 20 (136)
Q Consensus 2 ~~~~s~~~~~r~~~i~~~i 20 (136)
||..|++..++.+.|...+
T Consensus 1 Mp~~SKYs~~qvE~il~el 19 (75)
T d2jrxa1 1 MPQISRYSDEQVEQLLAEL 19 (75)
T ss_dssp CCCTTCTTHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHH
Confidence 7999999998887766544
No 24
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=30.88 E-value=25 Score=21.18 Aligned_cols=27 Identities=7% Similarity=0.087 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHhcCCCcEEEEeeecC
Q psy14558 9 RDIRIRAIAAELACNKYDIVCLQEVWK 35 (136)
Q Consensus 9 ~~~r~~~i~~~i~~~~pDIi~LQEv~~ 35 (136)
.+..++.+++.|...+||||+.|..-.
T Consensus 57 E~~~l~~~v~~I~~~g~nvvl~~~~I~ 83 (152)
T d1assa_ 57 ETNTFKQMVEKIKKSGANVVLCQKGID 83 (152)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEESSCBC
T ss_pred HHHHHHHHHHHHHhcccceEEEecccc
Confidence 466788899999999999999987654
No 25
>d2jpqa1 a.284.1.1 (A:1-75) Hypothetical protein VP2129 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=29.81 E-value=20 Score=19.36 Aligned_cols=19 Identities=37% Similarity=0.485 Sum_probs=14.8
Q ss_pred CCccccChHHHHHHHHHHH
Q psy14558 2 IPKVSKDRDIRIRAIAAEL 20 (136)
Q Consensus 2 ~~~~s~~~~~r~~~i~~~i 20 (136)
||..|++.+++.+.|...+
T Consensus 1 Mpi~SKYs~~qvE~il~el 19 (75)
T d2jpqa1 1 MPITSKYTDEQVEKILAEV 19 (75)
T ss_dssp CCSSCCSCHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHH
Confidence 7999999988877765543
No 26
>d2juza1 a.284.1.1 (A:1-72) Uncharacterized protein HI0840 {Haemophilus influenzae [TaxId: 727]}
Probab=29.67 E-value=20 Score=19.15 Aligned_cols=19 Identities=26% Similarity=0.429 Sum_probs=14.9
Q ss_pred CCccccChHHHHHHHHHHH
Q psy14558 2 IPKVSKDRDIRIRAIAAEL 20 (136)
Q Consensus 2 ~~~~s~~~~~r~~~i~~~i 20 (136)
||..|++.+++.+.|...+
T Consensus 1 Mpi~SKYs~~qvE~il~el 19 (72)
T d2juza1 1 MAQHSKYSDAQLSAIVNDM 19 (72)
T ss_dssp CCCCCCCCHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHH
Confidence 7899999988887766544
No 27
>d1j31a_ d.160.1.2 (A:) Hypothetical protein PH0642 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.73 E-value=16 Score=23.73 Aligned_cols=29 Identities=14% Similarity=0.171 Sum_probs=20.3
Q ss_pred cChHHHHHHHHHHH---hcCCCcEEEEeeecC
Q psy14558 7 KDRDIRIRAIAAEL---ACNKYDIVCLQEVWK 35 (136)
Q Consensus 7 ~~~~~r~~~i~~~i---~~~~pDIi~LQEv~~ 35 (136)
.+...+++.+.+.| .+.++|+|+|-|..-
T Consensus 14 ~d~e~nl~~i~~~i~~A~~~gadlvvfPE~~l 45 (262)
T d1j31a_ 14 LELDKNYSKAEKLIKEASKEGAKLVVLPELFD 45 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCSEEECCTTTT
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEcCCccc
Confidence 34566665555555 458899999999753
No 28
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]}
Probab=28.58 E-value=21 Score=20.12 Aligned_cols=19 Identities=11% Similarity=0.183 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCcEEEE
Q psy14558 12 RIRAIAAELACNKYDIVCL 30 (136)
Q Consensus 12 r~~~i~~~i~~~~pDIi~L 30 (136)
-.+.|.+.+++.++|+|++
T Consensus 97 ~~~~I~~~a~~~~~DLIV~ 115 (138)
T d1q77a_ 97 LSEEVKKFVEGKGYELVVW 115 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEE
T ss_pred hHHHHHHhhhhccCCEEEE
Confidence 3567888899999999986
No 29
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=27.89 E-value=30 Score=20.80 Aligned_cols=27 Identities=11% Similarity=0.153 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHhcCCCcEEEEeeecC
Q psy14558 9 RDIRIRAIAAELACNKYDIVCLQEVWK 35 (136)
Q Consensus 9 ~~~r~~~i~~~i~~~~pDIi~LQEv~~ 35 (136)
.+..+..+++.|.+.+||||+.|.--.
T Consensus 55 E~~~l~~~v~~i~~~g~nvv~~~k~Id 81 (152)
T d1a6db2 55 EENMLREMVDKIKSVGANVVITQKGID 81 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEESSCBC
T ss_pred HHHHHHHHHHHHhccCCceEEecCCCc
Confidence 455678888999999999999988654
No 30
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=26.80 E-value=35 Score=20.76 Aligned_cols=26 Identities=15% Similarity=0.156 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeeecC
Q psy14558 10 DIRIRAIAAELACNKYDIVCLQEVWK 35 (136)
Q Consensus 10 ~~r~~~i~~~i~~~~pDIi~LQEv~~ 35 (136)
...+..+++.|.+.+||||+.|..-.
T Consensus 62 ~~~l~~~v~~I~~~g~~vv~~~~~I~ 87 (168)
T d1gmla_ 62 EEYIHQLCEDIIQLKPDVVITEKGIS 87 (168)
T ss_dssp HHHHHHHHHHHHTTCCSEEEESSCBC
T ss_pred HHHHHHHHHHHHhcCCceEEEcCCCC
Confidence 46678888999999999999997554
No 31
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=25.58 E-value=25 Score=21.15 Aligned_cols=27 Identities=11% Similarity=0.202 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHhcCCCcEEEEeeecC
Q psy14558 9 RDIRIRAIAAELACNKYDIVCLQEVWK 35 (136)
Q Consensus 9 ~~~r~~~i~~~i~~~~pDIi~LQEv~~ 35 (136)
.++.+..+++.|...+||||+.|.--.
T Consensus 56 E~~~l~~~v~~I~~~g~nvvl~~k~I~ 82 (153)
T d1q3qa2 56 EEKMLKDMVDHIAQTGANVVFVQKGID 82 (153)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEESSCBC
T ss_pred HHHHHHHHHHHHhccCccceeecCCCc
Confidence 456688888899999999999987554
No 32
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]}
Probab=25.41 E-value=26 Score=19.87 Aligned_cols=19 Identities=5% Similarity=0.088 Sum_probs=16.5
Q ss_pred HHHHHHHHHhcCCCcEEEE
Q psy14558 12 RIRAIAAELACNKYDIVCL 30 (136)
Q Consensus 12 r~~~i~~~i~~~~pDIi~L 30 (136)
-.+.|.+.+++.++|+|++
T Consensus 90 ~~~~I~~~a~~~~~dliV~ 108 (140)
T d1jmva_ 90 LGQVLSDAIEQYDVDLLVT 108 (140)
T ss_dssp HHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhhhhchhhEEEe
Confidence 4567888999999999998
No 33
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]}
Probab=24.74 E-value=25 Score=19.87 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=16.1
Q ss_pred HHHHHHHHhcCCCcEEEEe
Q psy14558 13 IRAIAAELACNKYDIVCLQ 31 (136)
Q Consensus 13 ~~~i~~~i~~~~pDIi~LQ 31 (136)
.+.|.+.+++.++|+|++=
T Consensus 87 ~~~I~~~a~~~~~dliV~G 105 (135)
T d2z3va1 87 AEAILQAARAEKADLIVMG 105 (135)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhhhhheeeEEec
Confidence 4578899999999999874
No 34
>d1hjra_ c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId: 562]}
Probab=23.39 E-value=25 Score=21.44 Aligned_cols=28 Identities=11% Similarity=0.213 Sum_probs=19.5
Q ss_pred hHHHHHH----HHHHHhcCCCcEEEEeeecCC
Q psy14558 9 RDIRIRA----IAAELACNKYDIVCLQEVWKN 36 (136)
Q Consensus 9 ~~~r~~~----i~~~i~~~~pDIi~LQEv~~~ 36 (136)
...|+.. +.++|.+++||++++-+++-.
T Consensus 40 ~~~Rl~~i~~~l~~li~~~~Pd~vaiE~~f~~ 71 (158)
T d1hjra_ 40 LPSRLKLIYAGVTEIITQFQPDYFAIEQVFMA 71 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSEEEEEECCCC
T ss_pred hHHHHHHHHHHHHHHHhccCCCEEEEEeehhc
Confidence 3455444 555667789999999887654
No 35
>d1uf5a_ d.160.1.2 (A:) N-carbamoyl-D-aminoacid amidohydrolase {Agrobacterium sp. [TaxId: 361]}
Probab=22.95 E-value=24 Score=23.31 Aligned_cols=28 Identities=11% Similarity=0.194 Sum_probs=20.9
Q ss_pred cChHHHHHHHHHHHh---cCCCcEEEEeeec
Q psy14558 7 KDRDIRIRAIAAELA---CNKYDIVCLQEVW 34 (136)
Q Consensus 7 ~~~~~r~~~i~~~i~---~~~pDIi~LQEv~ 34 (136)
.++...++++.+.|+ +.++|+|+|-|..
T Consensus 18 ~~~~~~l~r~~~li~~A~~~gadlvvfPE~~ 48 (303)
T d1uf5a_ 18 ETREQVVVRLLDMLTKAASRGANFIVFPELA 48 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCSEEECCTTT
T ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCc
Confidence 456677777766654 5789999999975
No 36
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=20.84 E-value=32 Score=24.19 Aligned_cols=26 Identities=12% Similarity=0.095 Sum_probs=20.8
Q ss_pred HHHHHHHHHhcCCCcEEEEeeecCCC
Q psy14558 12 RIRAIAAELACNKYDIVCLQEVWKND 37 (136)
Q Consensus 12 r~~~i~~~i~~~~pDIi~LQEv~~~~ 37 (136)
......+.+.+.+||||++-|+....
T Consensus 215 ~~~~~l~~~lR~dPDvi~igEiRd~~ 240 (401)
T d1p9ra_ 215 TFARGLRAILRQDPDVVMVGEIRDLE 240 (401)
T ss_dssp CHHHHHHHHGGGCCSEEEESCCCSHH
T ss_pred CHHHHHHHHHhhcCCEEEecCcCChH
Confidence 35566677788999999999998653
No 37
>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=20.58 E-value=30 Score=20.64 Aligned_cols=22 Identities=32% Similarity=0.291 Sum_probs=18.3
Q ss_pred ChHHHHHHHHHHHhcCCCcEEE
Q psy14558 8 DRDIRIRAIAAELACNKYDIVC 29 (136)
Q Consensus 8 ~~~~r~~~i~~~i~~~~pDIi~ 29 (136)
+.+...+++++.|++.+||+|+
T Consensus 10 ~i~~~i~~la~~i~~~~~d~IV 31 (153)
T d1vdma1 10 QVDRAIFALAEKLREYKPDVII 31 (153)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHHHHHccCCCEEE
Confidence 3467788999999999999866
Done!