BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14559
(405 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193704514|ref|XP_001944340.1| PREDICTED: hypothetical protein LOC100161931 [Acyrthosiphon pisum]
Length = 673
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/284 (70%), Positives = 237/284 (83%), Gaps = 5/284 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKV+QV NIAPQAT+DQMQTLFG +GK+ED+RLYP RDVS+PVQSRICYVK+FD CV
Sbjct: 14 TKVIQVTNIAPQATKDQMQTLFGCIGKIEDIRLYPQIRDVSVPVQSRICYVKYFDSLCVA 73
Query: 71 ISQHLTNTVFIDRALVVTPYNS--GEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+VTPY S G+IPDE RAL+IA Q G +PKLPAHV NQ
Sbjct: 74 VAQHLTNTVFIDRALIVTPYQSSVGDIPDEYRALDIANQANIVPGLYPSDPKLPAHVVNQ 133
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG+PPNQVI T+DPVL +GLP YP LPITYD+++IEEIRRTL AIN++E+V+ EL+
Sbjct: 134 IEGIPPNQVIVTNDPVLASNGLPPYPQLPITYDSRRIEEIRRTLAAINVDENVTDDELIG 193
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FFQK G V Y+R+C+REND +YALVE+S+QA VI LKLNG L + +Q+ H+TQ+I
Sbjct: 194 FFQKAGDVKYVRWCSRENDITRYALVEYSEQASVIAGLKLNGVQLGSRPVQVTHATQAIA 253
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKK 289
KP AKSNEAAQREIEEAM+RVKEAQ++ISAAIDPVIGILSKDKK
Sbjct: 254 KPMAKSNEAAQREIEEAMTRVKEAQSLISAAIDPVIGILSKDKK 297
>gi|357607075|gb|EHJ65345.1| hypothetical protein KGM_03830 [Danaus plexippus]
Length = 588
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/281 (64%), Positives = 224/281 (79%), Gaps = 4/281 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV NIAPQAT+DQMQTLFGYLGK++D+RLYP RDVS PVQSRICYVK++D V
Sbjct: 6 TRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSATVN 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V P SGEIPDE RALE+++ G ++ EP+LPAHV N +E
Sbjct: 66 VAQHMTNTVFIDRALIVIPMQSGEIPDEHRALEMSSNGTLVPGLSTVEPRLPAHVINTLE 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G PPNQVI T+DP + GLP YPPLP YD++KIEEIRRTL+ I++ E S Q+L+D F
Sbjct: 126 GAPPNQVIQTYDPNIAAAGLPPYPPLPAIYDSRKIEEIRRTLLLIDVGELTS-QQLIDHF 184
Query: 188 QKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKP 247
+ G V+Y+RFC RE D KYAL+E ++Q + AL+LNG L G+ +++ HST +I KP
Sbjct: 185 CQAGEVSYVRFCEREVDNLKYALIEMTEQESISKALQLNGVALNGQVIKVHHSTVAISKP 244
Query: 248 EAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
+AKSNEAAQREIEEAM RVKEAQN+ISAAIDPVIG+LSKDK
Sbjct: 245 QAKSNEAAQREIEEAMCRVKEAQNLISAAIDPVIGLLSKDK 285
>gi|332026615|gb|EGI66724.1| Putative splicing factor, arginine/serine-rich 7 [Acromyrmex
echinatior]
Length = 493
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/280 (63%), Positives = 222/280 (79%), Gaps = 4/280 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D+ CV
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDQGCVA 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V PY +G+IPDEQRALE+ G EPKLP +V N IE
Sbjct: 66 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRALELTNNGTVVPGLYPSEPKLPPNVVNAIE 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G+PPN VI+T DP L + LP YP LP D+++IEEIRRTLV N++ SVSP++L+DFF
Sbjct: 126 GIPPNHVITTMDPKLEANSLPSYPHLPGHLDSRRIEEIRRTLVVANLDTSVSPEQLLDFF 185
Query: 188 QKVG-TVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
+ Y+R C+R++D + YALVE S+QA VI AL LNG ++++++HSTQ+I K
Sbjct: 186 SNNNIEIKYLRMCSRDSDADHYALVELSEQAAVIAALLLNGKQFAERSIKLYHSTQAIAK 245
Query: 247 PEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSK 286
PEAKSNEAAQ+EIEEAMSRVKEA N+ISAAIDP+IG+LSK
Sbjct: 246 PEAKSNEAAQKEIEEAMSRVKEAHNLISAAIDPMIGMLSK 285
>gi|307177851|gb|EFN66814.1| Probable splicing factor, arginine/serine-rich 7 [Camponotus
floridanus]
Length = 495
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/282 (63%), Positives = 224/282 (79%), Gaps = 4/282 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D+ CV
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDQGCVA 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V PY +G+IPDEQRALE+ G EPKLP +V N IE
Sbjct: 66 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRALELTNNGTVVPGLYPSEPKLPPNVVNAIE 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G+PPN VI+T DP L +GLP YP LP D+++IEEIRRTL+ N++ VSP++L+DFF
Sbjct: 126 GIPPNHVITTMDPKLEANGLPPYPHLPGHLDSRRIEEIRRTLIVANLDSLVSPEQLLDFF 185
Query: 188 QKVGT-VNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
+ Y+R C+R++D+ YALVE S+QA VI AL LNG L + ++++HSTQ+I K
Sbjct: 186 SNNNVEIKYLRMCSRDSDSEHYALVELSEQAAVIAALLLNGKPLMERPIKIYHSTQAIAK 245
Query: 247 PEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
PEAKSNEAAQ+EIEEAMSRVKEA N+ISAAIDP+IG+LSKDK
Sbjct: 246 PEAKSNEAAQKEIEEAMSRVKEAHNLISAAIDPMIGMLSKDK 287
>gi|340716414|ref|XP_003396693.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Bombus terrestris]
Length = 487
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/280 (64%), Positives = 220/280 (78%), Gaps = 4/280 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D+ CV
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDQGCVA 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V PY +G+IPDEQRALE+ G EPKLP +V N IE
Sbjct: 66 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRALELTNNGTVVPGLYPSEPKLPPNVVNAIE 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G+PPN VI+T DP L +GLP YP LP D+++IEEIRRTLV N++ SV+ L+DFF
Sbjct: 126 GIPPNHVITTMDPKLEANGLPPYPHLPGHLDSRRIEEIRRTLVLANLDPSVTTDHLLDFF 185
Query: 188 QKVGT-VNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
V Y+R CTR++DT YALVE S+QA V+ AL LNG L + ++++HSTQ+I K
Sbjct: 186 SNNNVEVKYLRMCTRDSDTEHYALVELSEQAAVVSALLLNGKLLMDRPIKIYHSTQAIAK 245
Query: 247 PEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSK 286
PEAKSNEAAQ+EIEEAMSRVKEA N+ISAAIDP+IG+LSK
Sbjct: 246 PEAKSNEAAQKEIEEAMSRVKEAHNLISAAIDPMIGMLSK 285
>gi|383866149|ref|XP_003708534.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Megachile rotundata]
Length = 489
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/284 (64%), Positives = 223/284 (78%), Gaps = 10/284 (3%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D+ CV
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDQGCVA 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V PY +G+IPDEQRALE+ G EPKLP +V N IE
Sbjct: 66 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRALELTNNGTVVPGLYPSEPKLPPNVVNAIE 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G+PPN VI+T DP L +GLP YP LP D+++IEEIRRTLV N++ SV+ L+DFF
Sbjct: 126 GIPPNHVITTMDPKLEANGLPPYPHLPGHLDSRRIEEIRRTLVLANLDPSVTTDHLLDFF 185
Query: 188 QKVGTVN----YIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQS 243
GT N Y+R C+R++DT YALVE S+QA V+ AL LNG L + ++++HSTQ+
Sbjct: 186 ---GTNNVEVKYLRMCSRDSDTEHYALVELSEQAAVVSALLLNGKVLVDRPIKIYHSTQA 242
Query: 244 IQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
I KPEAKSNEAAQ+EIEEAMSRVKEA N+ISAAIDP+IG+LSKD
Sbjct: 243 IAKPEAKSNEAAQKEIEEAMSRVKEAHNLISAAIDPMIGMLSKD 286
>gi|350406337|ref|XP_003487737.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Bombus impatiens]
Length = 487
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/280 (64%), Positives = 220/280 (78%), Gaps = 4/280 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D+ CV
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDQGCVA 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V PY +G+IPDEQRALE+ G EPKLP +V N IE
Sbjct: 66 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRALELTNNGTVVPGLYPSEPKLPPNVVNAIE 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G+PPN VI+T DP L +GLP YP LP D+++IEEIRRTLV N++ SV+ L+DFF
Sbjct: 126 GIPPNHVITTMDPKLEANGLPPYPHLPGHLDSRRIEEIRRTLVLANLDPSVTTDHLLDFF 185
Query: 188 QKVGT-VNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
V Y+R CTR++DT YALVE S+QA V+ AL LNG L + ++++HSTQ+I K
Sbjct: 186 SNNNVEVKYLRMCTRDSDTEHYALVELSEQAAVVSALLLNGKLLMDRPIKIYHSTQAIAK 245
Query: 247 PEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSK 286
PEAKSNEAAQ+EIEEAMSRVKEA N+ISAAIDP+IG+LSK
Sbjct: 246 PEAKSNEAAQKEIEEAMSRVKEAHNLISAAIDPMIGMLSK 285
>gi|156554641|ref|XP_001605226.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Nasonia vitripennis]
Length = 501
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 220/281 (78%), Gaps = 4/281 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D V
Sbjct: 7 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDTNHVA 66
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V PY +G+IPDEQRALE+ G EPKLP +V N IE
Sbjct: 67 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRALELTNNGSVVPGLYPSEPKLPPNVVNAIE 126
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G+PPN VI+T DP L +GLP YP LP D++KIEEIRRTLV N++ S + Q+L++FF
Sbjct: 127 GIPPNHVITTMDPKLEANGLPLYPHLPGHLDSRKIEEIRRTLVVGNLDASTTDQQLIEFF 186
Query: 188 QKVGT-VNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
V Y R CTR++DT+ YALVEFS+QA ++PAL+LNG L + +++ HS Q+I K
Sbjct: 187 GNHNVEVKYTRLCTRDSDTDHYALVEFSEQASIVPALQLNGQMLNDRPIKIGHSVQAIMK 246
Query: 247 PEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
PEAKSNEAAQ+EIEEAMSRVKEA N+ISA IDP+IG+LSKD
Sbjct: 247 PEAKSNEAAQKEIEEAMSRVKEAHNLISATIDPMIGMLSKD 287
>gi|307198835|gb|EFN79611.1| Probable splicing factor, arginine/serine-rich 7 [Harpegnathos
saltator]
Length = 455
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 174/282 (61%), Positives = 222/282 (78%), Gaps = 11/282 (3%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D+ CV
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDQGCVA 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVP 130
++QH+TNTVFIDRAL+V PY +G+IPDEQR EPKLP +V N IEG+P
Sbjct: 66 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRLY----------PSEPKLPPNVVNAIEGIP 115
Query: 131 PNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV 190
PN VI+T DP L +GLP YP LP D+++IEEIRRTL+ N++ SVS ++L++FF
Sbjct: 116 PNHVITTMDPKLEANGLPPYPHLPGHLDSRRIEEIRRTLIVANLDASVSAEQLLEFFSNN 175
Query: 191 GT-VNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEA 249
+ Y+R C+R++DT YALVE S+Q V+ AL LNG +L + ++++HSTQ+I KPEA
Sbjct: 176 NVEIKYLRMCSRDSDTEHYALVELSEQGAVVAALLLNGKSLAERPIKIYHSTQAIAKPEA 235
Query: 250 KSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKS 291
KSNEAAQ+EIEEAMSRVKEA N+ISAAIDP+IG+LSKDK+++
Sbjct: 236 KSNEAAQKEIEEAMSRVKEAHNLISAAIDPMIGMLSKDKRRA 277
>gi|380019639|ref|XP_003693710.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Apis florea]
Length = 487
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/280 (64%), Positives = 220/280 (78%), Gaps = 4/280 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D+ CV
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDQGCVA 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V PY +G+IPDEQRALE+ G EPKLP +V N IE
Sbjct: 66 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRALELTNNGTVVPGLYPSEPKLPPNVVNTIE 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G+PPN VI+T DP L +GLP YP LP D+++IEEIRRTLV N++ SV+ L+DFF
Sbjct: 126 GIPPNHVITTIDPKLEANGLPPYPHLPGHLDSRRIEEIRRTLVLANLDPSVTTDHLLDFF 185
Query: 188 QKVGT-VNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
V Y+R CTR++DT YALVE S+QA V+ AL LNG L + ++++HSTQ+I K
Sbjct: 186 SNNNVEVKYLRMCTRDSDTEHYALVELSEQAAVVSALLLNGKLLLDRAIKIYHSTQAIAK 245
Query: 247 PEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSK 286
PEAKSNEAAQ+EIEEAMSRVKEA N+ISAAIDP+IG+LSK
Sbjct: 246 PEAKSNEAAQKEIEEAMSRVKEAHNLISAAIDPMIGMLSK 285
>gi|66531780|ref|XP_623583.1| PREDICTED: probable splicing factor, arginine/serine-rich 7 [Apis
mellifera]
Length = 486
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/280 (64%), Positives = 220/280 (78%), Gaps = 4/280 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDV++PVQSRICY+KF D+ CV
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVAVPVQSRICYIKFHDQGCVA 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V PY +G+IPDEQRALE+ G EPKLP +V N IE
Sbjct: 66 VAQHMTNTVFIDRALIVIPYQNGDIPDEQRALELTNNGTVVPGLYPSEPKLPPNVVNTIE 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G+PPN VI+T DP L +GLP YP LP D+++IEEIRRTLV N++ SV+ L+DFF
Sbjct: 126 GIPPNHVITTIDPKLEANGLPPYPHLPGHLDSRRIEEIRRTLVLANLDPSVTTDHLLDFF 185
Query: 188 QKVGT-VNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
V Y+R CTR++DT YALVE S+QA V+ AL LNG L + ++++HSTQ+I K
Sbjct: 186 SNNNVEVKYLRMCTRDSDTEHYALVELSEQAAVVSALLLNGKLLLDRAIKIYHSTQAIAK 245
Query: 247 PEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSK 286
PEAKSNEAAQ+EIEEAMSRVKEA N+ISAAIDP+IG+LSK
Sbjct: 246 PEAKSNEAAQKEIEEAMSRVKEAHNLISAAIDPMIGMLSK 285
>gi|91086291|ref|XP_973507.1| PREDICTED: similar to Srp54 CG4602-PA [Tribolium castaneum]
gi|270009855|gb|EFA06303.1| hypothetical protein TcasGA2_TC009171 [Tribolium castaneum]
Length = 526
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/280 (58%), Positives = 208/280 (74%), Gaps = 3/280 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV NIAPQAT+DQMQTLFGYLGK+ED+RLYP RDVS PVQSRICYVKF D VG
Sbjct: 6 TKVVQVTNIAPQATKDQMQTLFGYLGKIEDIRLYPTIRDVSCPVQSRICYVKFVDSSTVG 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGEPKLPAHVTNQIE 127
++QH+TNTVFIDRAL+V P +G+IPDE ALE+ G N EPKLP HV+N +
Sbjct: 66 VAQHMTNTVFIDRALIVIPVINGDIPDEYYALEMTRNGTIVPGFNVNEPKLPPHVSNSFQ 125
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G +V+ T+DP L +G YPPLP YD+ K+EE RRT+ +NI+ ++ E++ +F
Sbjct: 126 GTGEERVVVTNDPHLTDNGCAPYPPLPAKYDSIKVEETRRTVQVVNIDPAIPTDEIIQYF 185
Query: 188 QKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKP 247
+ G V Y+R C ND + L+EF++Q V+ A+K+NG KGK L++ H+TQ I KP
Sbjct: 186 SQAGEVKYLRVCECPNDNTTHILIEFTEQPSVVNAMKMNGEEFKGKPLEIIHATQPIMKP 245
Query: 248 EAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
+AKSNEAAQ+EIEEAMSR KEAQNMI+A+I+PVIG+L+KD
Sbjct: 246 QAKSNEAAQKEIEEAMSRFKEAQNMINASIEPVIGMLTKD 285
>gi|312385512|gb|EFR29992.1| hypothetical protein AND_00693 [Anopheles darlingi]
Length = 578
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/287 (58%), Positives = 216/287 (75%), Gaps = 7/287 (2%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQ+ NIAPQAT+DQMQ LFG++GK++++RLYP RDVS PV SRICYVK+F+ CV
Sbjct: 7 TKVVQITNIAPQATKDQMQNLFGHVGKIDEIRLYPTIRDVSCPVVSRICYVKYFESSCVA 66
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPN--SGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G IPDE +ALE+AA G + S KLP V N+
Sbjct: 67 VAQHLTNTVFIDRALIVIPVQGGMIPDEYKALEMAANGTLVPGLHSISSSSKLPPEVVNR 126
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
I+G+ PNQV+ T DP L +HGLP+YPPLP+ +D KKIEE RRT++ ++I +EL++
Sbjct: 127 IDGMVPNQVVKTIDPKLEEHGLPEYPPLPVNFDAKKIEETRRTILVLDIRSDWRLEELME 186
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
F+ G + Y R+ END ++AL+EF DQ +I ALK++GT +G + + HSTQ I
Sbjct: 187 HFKPAGEIKYARYA--ENDRTRFALLEFCDQRNIINALKMHGTEFRGYRICVHHSTQPIV 244
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSH 292
KPEAKSNEAAQ+EIEEAMS VKEAQ+MISAAIDPVIG+L+KDK ++
Sbjct: 245 KPEAKSNEAAQKEIEEAMSIVKEAQSMISAAIDPVIGMLAKDKGSTN 291
>gi|157129760|ref|XP_001661752.1| hypothetical protein AaeL_AAEL011568 [Aedes aegypti]
gi|108872115|gb|EAT36340.1| AAEL011568-PA [Aedes aegypti]
Length = 522
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 164/283 (57%), Positives = 214/283 (75%), Gaps = 7/283 (2%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQ+ NIAPQAT+DQMQ LFG++GK++++RLYP RDVS PV SRICYVK+F+ CV
Sbjct: 8 TKVVQITNIAPQATKDQMQNLFGHIGKIDEIRLYPTIRDVSCPVVSRICYVKYFESSCVA 67
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNS--GEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G IPDE +ALE+AA G +S G KLP V N+
Sbjct: 68 VAQHLTNTVFIDRALIVIPVQGGMIPDEYKALEMAANGTLVPGLHSIEGPSKLPPEVVNR 127
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
I+G+ PNQV+ T DP L ++ LP+YPPLP+ +D KKIEE RRTL+ ++I+ +EL+D
Sbjct: 128 IDGMVPNQVMKTIDPKLDENNLPEYPPLPVNFDAKKIEETRRTLLVLDIKSDWRLEELMD 187
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
F+ G + Y R+ EN+ +++AL+EF +Q +I LK++G+ +G L + HSTQ I
Sbjct: 188 HFKLCGEIKYARYA--ENERSRFALLEFCEQKSIIAGLKMHGSEFRGYRLNVHHSTQPIV 245
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ+EIEEAMS VKEA +MISAAIDPVIG+L+KDK
Sbjct: 246 KPEAKSNEAAQKEIEEAMSIVKEAHHMISAAIDPVIGMLAKDK 288
>gi|242020567|ref|XP_002430724.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515914|gb|EEB17986.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 470
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/353 (47%), Positives = 232/353 (65%), Gaps = 16/353 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+Q+ NIAPQ T+DQM +LFGY+GK+E ++LYP R+V++P +S +CYVKF D VG+
Sbjct: 5 RVIQITNIAPQTTKDQMHSLFGYIGKIEQIQLYPTIREVAVPGRSLVCYVKFMDSASVGV 64
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVPP 131
+QHLTNTVFIDRAL+V P++S +IPDEQ+A E+ P PKL VTNQ+EG PP
Sbjct: 65 AQHLTNTVFIDRALIVVPFSSNDIPDEQKAFELTR----PG---PKLAPGVTNQLEGFPP 117
Query: 132 NQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVG 191
NQV+ THDP L++H LP YPPLP D+ ++EIRRT+V N++ S+ Q +++ F K G
Sbjct: 118 NQVLVTHDPRLIEHNLPLYPPLPSNTDSNTLDEIRRTVVITNLDRSIGSQNVIELFSKAG 177
Query: 192 TVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKS 251
V Y+RFC R DT YALVEF+DQ +I ALK+NG L G T++++HS Q+I KP+ KS
Sbjct: 178 EVKYVRFCFRPGDTANYALVEFTDQTSIIAALKMNGMQLAGNTIKVYHSIQAIVKPQPKS 237
Query: 252 NEAAQREIEEAMSRVKEAQNMIS---AAIDPVIGILSKDK-KKSHSPVRHLVIVL--IVV 305
+EAAQREI+EAM+ M+ A D GIL +D+ + + P + L + V+
Sbjct: 238 DEAAQREIQEAMTAQDLEAVMVDRGEADHDQDQGILEEDRDQDTEDPGQDLDVQGQEGVL 297
Query: 306 DVALDLALEIGDDLEVVVRDVGHVREEDQDHVVDVLCLVIVRDPHVARDVHAP 358
D L+ + D V+ D VR EDQD V + L LV D + RD+ P
Sbjct: 298 DQGHTLSTQEDRD-RVIDVDPDLVRGEDQDPVQNGLALVPKED--LVRDLTDP 347
>gi|321478454|gb|EFX89411.1| hypothetical protein DAPPUDRAFT_310457 [Daphnia pulex]
Length = 549
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 150/268 (55%), Positives = 198/268 (73%), Gaps = 2/268 (0%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
K+VQV N+APQA ++QMQTLFG +GK+EDLRLYP RD++ PVQ RIC+VK+ D V +
Sbjct: 18 KIVQVTNVAPQANKEQMQTLFGIIGKIEDLRLYPTLRDLNAPVQLRICFVKYSDPNDVPV 77
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVPP 131
+ HL+NTVFIDRA+ VT Y+ E+PDE + +EI G S +PKLPA +TNQIEG PP
Sbjct: 78 ALHLSNTVFIDRAVSVTLYHGNELPDESKGIEILNSSSGFGSSDPKLPATLTNQIEGNPP 137
Query: 132 NQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVG 191
+QVI T DP L H LP YP LP + D++++EEIRRT+VAIN++ S + ++++DFF G
Sbjct: 138 HQVIRTLDPRLSIHNLPNYPLLPASTDSRRLEEIRRTVVAINLDPSRTAKQVIDFFSSAG 197
Query: 192 TVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKP--EA 249
V Y RFCT+ D NKYA++EF +Q V+PALKLN +++ HSTQSI KP +
Sbjct: 198 EVKYFRFCTKHGDENKYAMIEFVEQESVVPALKLNNKQFGDSIIKVHHSTQSIIKPVQQT 257
Query: 250 KSNEAAQREIEEAMSRVKEAQNMISAAI 277
KSNEAAQ+EIEEA++RVKEAQ +I A+
Sbjct: 258 KSNEAAQKEIEEAVNRVKEAQQLIPVAL 285
>gi|347967504|ref|XP_307915.5| AGAP002265-PA [Anopheles gambiae str. PEST]
gi|347967506|ref|XP_003436075.1| AGAP002265-PB [Anopheles gambiae str. PEST]
gi|333466263|gb|EAA03659.5| AGAP002265-PA [Anopheles gambiae str. PEST]
gi|333466264|gb|EGK96186.1| AGAP002265-PB [Anopheles gambiae str. PEST]
Length = 570
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/283 (55%), Positives = 207/283 (73%), Gaps = 8/283 (2%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQ+ NIAPQAT+DQMQT G +GK++++RLYP RDVS PV SRICYVK+F+ CV
Sbjct: 7 TKVVQITNIAPQATKDQMQTFLGTVGKIDEIRLYPTIRDVSCPVVSRICYVKYFESSCVA 66
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNSGE--PKLPAHVTNQ 125
++QHLTNTVFIDRA++V P +G IPDE +ALE+AA G +S KLP V N+
Sbjct: 67 VAQHLTNTVFIDRAVIVIPVANGVIPDEYKALEMAANGTLVPGLHSFNVPSKLPPEVVNR 126
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
I+G+ PNQV+ T DP L ++GLP+YPPLP+ +D KKIEE RRT++ +++ +EL+D
Sbjct: 127 IDGMIPNQVVKTIDPKLEENGLPEYPPLPVNFDAKKIEETRRTILILDVRSDWRLEELMD 186
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
F+ G + Y R+ EN+ +K AL+EF DQ +I ALK++GT +G L + HSTQ I
Sbjct: 187 HFKPAGEIKYARYA--ENERSKLALLEFCDQRNIINALKMHGTEFRGYRLNVHHSTQPIV 244
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ+EIEEAM+ VKEA + IS ++DPV+ I KDK
Sbjct: 245 KPEAKSNEAAQKEIEEAMTIVKEAHHQIS-SMDPVVAIYPKDK 286
>gi|194761572|ref|XP_001963003.1| GF15723 [Drosophila ananassae]
gi|190616700|gb|EDV32224.1| GF15723 [Drosophila ananassae]
Length = 514
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/283 (57%), Positives = 205/283 (72%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ D V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTSSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ +EN T Y ++EF +Q +I AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKENKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLNVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|195436977|ref|XP_002066421.1| GK18279 [Drosophila willistoni]
gi|194162506|gb|EDW77407.1| GK18279 [Drosophila willistoni]
Length = 534
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/283 (57%), Positives = 205/283 (72%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ D V I
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPI 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP L++ LP+YP LP YD +KIEEIRRT++ +++ +L+D
Sbjct: 123 IEGQLPQQVIKTYDPKLIEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLMD 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q +I AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YGMIEFCEQTSIIHALRMQGQEFKGGYLNVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|17137528|ref|NP_477347.1| Srp54 [Drosophila melanogaster]
gi|7297571|gb|AAF52825.1| Srp54 [Drosophila melanogaster]
gi|17862472|gb|AAL39713.1| LD29830p [Drosophila melanogaster]
gi|220947044|gb|ACL86065.1| Srp54-PA [synthetic construct]
gi|220956606|gb|ACL90846.1| Srp54-PA [synthetic construct]
Length = 513
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 205/283 (72%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ D V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q +I AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|7532408|gb|AAC32822.3| splicing factor SRp54 [Drosophila melanogaster]
Length = 513
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 205/283 (72%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ D V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q +I AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|195473415|ref|XP_002088989.1| GE18876 [Drosophila yakuba]
gi|194175090|gb|EDW88701.1| GE18876 [Drosophila yakuba]
Length = 513
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/282 (57%), Positives = 204/282 (72%), Gaps = 13/282 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ D V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L+D
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLMD 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q +I AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KD
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKD 282
>gi|195117080|ref|XP_002003077.1| GI17720 [Drosophila mojavensis]
gi|193913652|gb|EDW12519.1| GI17720 [Drosophila mojavensis]
Length = 513
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 204/283 (72%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ + V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTESSSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ ++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVRNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q VI AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSVIHALRMQGQEFKGGHLNVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|195387526|ref|XP_002052445.1| GJ17548 [Drosophila virilis]
gi|194148902|gb|EDW64600.1| GJ17548 [Drosophila virilis]
Length = 508
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/283 (57%), Positives = 204/283 (72%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ + V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTETSSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ ++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVRNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q VI AL+L G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSVIHALRLQGQEFKGGHLSVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|195577951|ref|XP_002078830.1| GD23635 [Drosophila simulans]
gi|194190839|gb|EDX04415.1| GD23635 [Drosophila simulans]
Length = 512
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/282 (57%), Positives = 204/282 (72%), Gaps = 13/282 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ D V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q +I AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KD
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKD 282
>gi|194859370|ref|XP_001969361.1| GG10062 [Drosophila erecta]
gi|190661228|gb|EDV58420.1| GG10062 [Drosophila erecta]
Length = 513
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/282 (57%), Positives = 204/282 (72%), Gaps = 13/282 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ + V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTETTSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L+D
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLMD 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q +I AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KD
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKD 282
>gi|195339577|ref|XP_002036394.1| GM17744 [Drosophila sechellia]
gi|194130274|gb|EDW52317.1| GM17744 [Drosophila sechellia]
Length = 512
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 161/282 (57%), Positives = 204/282 (72%), Gaps = 13/282 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ D V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTTSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q +I AL++ G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KD
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKD 282
>gi|195033470|ref|XP_001988690.1| GH11300 [Drosophila grimshawi]
gi|193904690|gb|EDW03557.1| GH11300 [Drosophila grimshawi]
Length = 521
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 163/283 (57%), Positives = 204/283 (72%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ + V I
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTETTSVPI 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP L++ LP+YP LP YD +KIEEIRRT++ ++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLLEFNLPEYPALPSFYDGRKIEEIRRTIIVCDVRNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q VI AL+L G KG L ++HST SI
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSVIHALRLQGQEFKGGHLSVYHSTYSIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|125985151|ref|XP_001356339.1| GA18291 [Drosophila pseudoobscura pseudoobscura]
gi|54644662|gb|EAL33402.1| GA18291 [Drosophila pseudoobscura pseudoobscura]
Length = 515
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 204/283 (72%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ + V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTETTSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ ++N T Y ++EF +Q +I AL++ G KG L ++HST I
Sbjct: 183 CFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGYLSVYHSTYCIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|195146978|ref|XP_002014460.1| GL18941 [Drosophila persimilis]
gi|194106413|gb|EDW28456.1| GL18941 [Drosophila persimilis]
Length = 515
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 202/283 (71%), Gaps = 13/283 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV NIAPQAT+DQMQTLFG +GK+E++RLYP RDVS PVQSRICYVK+ + V +
Sbjct: 8 RVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTETTSVPV 67
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALE------IAAQQQGPNSGEPKLPAHVTNQ 125
+QHLTNTVFIDRAL+V P + IP+E RALE I Q P+S KLP V N+
Sbjct: 68 AQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDS---KLPPEVINR 122
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
IEG P QVI T+DP LV+ LP+YP LP YD +KIEEIRRT++ +++ +L++
Sbjct: 123 IEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLDDLME 182
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
FQ+ G V Y R+ E D Y ++EF +Q +I AL++ G KG L ++HST I
Sbjct: 183 CFQRAGEVKYARWA--EKDIKTYCMIEFCEQTSIIHALRMQGQEFKGGYLSVYHSTYCIT 240
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
KPEAKSNEAAQ EIEEAM+ VKEAQ+MISAAIDPVIG+L+KDK
Sbjct: 241 KPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDK 283
>gi|170068299|ref|XP_001868814.1| Srp54 [Culex quinquefasciatus]
gi|167864353|gb|EDS27736.1| Srp54 [Culex quinquefasciatus]
Length = 506
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/282 (51%), Positives = 189/282 (67%), Gaps = 38/282 (13%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQ+ NIAPQAT+DQMQ+LFG++GK++++RLYP RDVS PV SRICYVKFF+ CV
Sbjct: 7 TKVVQITNIAPQATKDQMQSLFGHIGKIDEIRLYPTIRDVSCPVVSRICYVKFFETSCVA 66
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ---GPNS--GEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G IPDE +ALE+AA G ++ G KLP V N+
Sbjct: 67 VAQHLTNTVFIDRALIVIPVQGGLIPDEYKALEMAANGTLVPGLHNIDGPCKLPPEVVNR 126
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVD 185
I+G+ PNQ RRTL+ ++++ ++L+D
Sbjct: 127 IDGMVPNQT-------------------------------RRTLLVLDVKSDWRLEDLMD 155
Query: 186 FFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
F+ G + Y RF +N+ +YAL+EF +Q +I LK+ G+ +G L + HSTQ I
Sbjct: 156 HFKVAGEIKYARFA--DNERTRYALLEFCEQKSIILGLKMQGSEFRGYRLSVHHSTQPIV 213
Query: 246 KPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
KPEAKSNEAAQ+EIEEAMS VKEAQ+MISAAIDPVIG+LSKD
Sbjct: 214 KPEAKSNEAAQKEIEEAMSIVKEAQSMISAAIDPVIGMLSKD 255
>gi|405961668|gb|EKC27433.1| Putative splicing factor, arginine/serine-rich 7 [Crassostrea
gigas]
Length = 449
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 179/271 (66%), Gaps = 1/271 (0%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
+ TKV+Q+ NIAP AT+DQM+TLFGYLG++++ ++YP +++CYVK+ D
Sbjct: 5 ITTKVIQITNIAPNATKDQMKTLFGYLGRIDECKMYPSNELPEGDTSTKVCYVKYDDSVS 64
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQ-QGPNSGEPKLPAHVTNQIE 127
GI+ HLTNTVFIDRAL++ P G+IPDE AL+IA G G P P++V +Q+
Sbjct: 65 SGIALHLTNTVFIDRALIIVPVMDGKIPDETTALQIAPSAIAGMIPGTPSWPSNVISQMT 124
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
G Q+I+THDP L GL QYPPLP D KIEEIRRT+ N+ ++V+ ++L+ FF
Sbjct: 125 GTGLTQMITTHDPKLTALGLLQYPPLPGNTDPAKIEEIRRTVYVGNLAKNVTTEQLLSFF 184
Query: 188 QKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKP 247
+VG V Y+R E K A VEF+DQ + AL NG + + + H+T I KP
Sbjct: 185 SQVGEVKYVRMAGDEKQPTKNAYVEFTDQRSISTALTYNGVMFQTLPISVTHATACIIKP 244
Query: 248 EAKSNEAAQREIEEAMSRVKEAQNMISAAID 278
+K+ EAAQREIEEAM +VKEAQ++I+AA+D
Sbjct: 245 ISKTQEAAQREIEEAMKKVKEAQSLITAAVD 275
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 181/274 (66%), Gaps = 8/274 (2%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV+N+AP A+R+QM+TLF Y+G++E+L+L+P + + Q R+CY+KF + G
Sbjct: 7 TQVIQVSNVAPTASREQMKTLFTYIGRIEELKLFP--DEFTETNQPRVCYIKFSKSEEAG 64
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIA---AQQQGPNSGEPK---LPAHVTN 124
++ HL+NTVF+DRAL+V P G IPDE +AL+++ A G SG+ K LP+HVTN
Sbjct: 65 VALHLSNTVFVDRALMVVPVADGTIPDESKALQLSPATAASIGGASGKAKPSGLPSHVTN 124
Query: 125 QIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELV 184
Q+ V Q+I T DP L LP YP LP D K++EIRRT+ N++ +P++L+
Sbjct: 125 QVIVVNGKQMIQTIDPQLSAMNLPSYPLLPGGTDPSKVDEIRRTIFVGNLDSISTPEQLL 184
Query: 185 DFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
FF + G V Y+R E ++A VEF++QA ++ AL LNG+ G+ +++ HS +I
Sbjct: 185 QFFTQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALVLNGSLFSGRPVRVNHSNVAI 244
Query: 245 QKPEAKSNEAAQREIEEAMSRVKEAQNMISAAID 278
KP + RE+EEA+ +VKEAQ++ISAA+D
Sbjct: 245 VKPVGSHGASCNREVEEALKKVKEAQSLISAAVD 278
>gi|260821314|ref|XP_002605978.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
gi|229291315|gb|EEN61988.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
Length = 645
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 191/352 (54%), Gaps = 58/352 (16%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
+TKV+QV N+AP AT++QMQTLF +LGK+++++LYP D+S+PV S++CYVK+ D
Sbjct: 2 TQTKVIQVTNVAPAATKEQMQTLFSFLGKIDEIKLYP--EDISVPVTSKVCYVKYDDPTN 59
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQG-----------PNSGEPK 117
G++QHLTNTVFIDRAL+V P G IPDE +AL++AA S
Sbjct: 60 CGVAQHLTNTVFIDRALIVVPCQDGIIPDEAKALQLAAPANAVAGMIPGGAAPAASALLP 119
Query: 118 LPAHVTNQIEGVPPNQVIST----------HDPVLVQHGLPQYPPLPITYDTKKIEEIRR 167
PA + N + +DP L GLPQ PPLP D KIEEIRR
Sbjct: 120 TPAPIANPLLAAAGVAGGPGVAAGAGLAPQYDPALAALGLPQPPPLPGNVDPSKIEEIRR 179
Query: 168 TLVAINIEESVSP------------------------------QELVDFFQKVGTVNYIR 197
T+ N++ + P ++L++FFQ+VG V Y+R
Sbjct: 180 TIYVGNLDSATLPPLPGNVDPSKIDEIRRTVYVGNLDSATVTAEQLLNFFQQVGEVKYVR 239
Query: 198 FCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQR 257
E ++A VEF+DQ V AL+ NG + L++ HS +I KP+ ++ EA +R
Sbjct: 240 MAGDETQPTRFAFVEFADQTSVAKALQYNGIMFGNRPLKINHSNNAIVKPQTQTPEAQRR 299
Query: 258 EIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSHSPVRHLVIVLIVVDVAL 309
EIEEAM RV++A+ +I+AAI+P K S + H ++L + D+ L
Sbjct: 300 EIEEAMKRVRDAEALITAAIEP-----GAPKPLSSYCILHFSLILCLCDMVL 346
>gi|291242201|ref|XP_002740997.1| PREDICTED: splicing factor, arginine/serine-rich 12-like
[Saccoglossus kowalevskii]
Length = 574
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 180/281 (64%), Gaps = 13/281 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKV+QV N+AP AT +QM+TLFG+LG +E+++L+P D IPV SR+C+VK+ D VG
Sbjct: 4 TKVIQVTNVAPGATLEQMKTLFGFLGDIEEIQLFP-QEDSIIPVTSRVCFVKYEDSTSVG 62
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQG-----PNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G IPDE +AL IAA P G LP +
Sbjct: 63 VAQHLTNTVFIDRALIVVPCGDGTIPDESKALMIAAPANAVAGLMPAPGGGLLPTPSQSI 122
Query: 126 IEGVP------PNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIE-ESV 178
+ +P Q+ + DP L GLPQ PPLP D KIEEIRRT+ N++ ++V
Sbjct: 123 LGQLPLAGLAGAAQITAPFDPTLAALGLPQPPPLPGNVDPSKIEEIRRTIYVGNLDSQTV 182
Query: 179 SPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
+ ++L++FF +VG V Y+R E ++A VEFSDQ V AL NG G+ L++
Sbjct: 183 TAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAAALTYNGVMFGGRPLKIN 242
Query: 239 HSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
HS +I KP+ K+ EAA RE+EEAM RV++AQ +I AAIDP
Sbjct: 243 HSNNAIVKPQTKTPEAAAREMEEAMKRVRDAQALIQAAIDP 283
>gi|380792715|gb|AFE68233.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a,
partial [Macaca mulatta]
Length = 394
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|28703790|gb|AAH47322.1| Similar to expressed sequence AI450757, partial [Homo sapiens]
Length = 386
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 167/282 (59%), Gaps = 11/282 (3%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSP 180
GV + + + DP + G PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTA 196
Query: 181 QELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ HS
Sbjct: 197 DQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 256
Query: 241 TQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
+I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 257 NNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 171/289 (59%), Gaps = 13/289 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLFG+LG +E+LRLYP + + S++CY+KF + VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFGFLGDIEELRLYP-PDNAPLAFSSKVCYIKFREASSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA-----QQQGPNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G+IPDE +AL + A P +G +P
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTMTSLMPGAGLLPIPTPTPLT 136
Query: 126 IEGVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + DP + G +PQ PP+ D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLGTLGAIPAAALDPNITALGEIPQ-PPIMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G S+ K
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSSERK 304
>gi|193787205|dbj|BAG52411.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 167/282 (59%), Gaps = 11/282 (3%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSP 180
GV + + + DP + G PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTA 196
Query: 181 QELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ HS
Sbjct: 197 DQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 256
Query: 241 TQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
+I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 257 NNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 173/289 (59%), Gaps = 13/289 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G S+ K
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSSERK 304
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 173/289 (59%), Gaps = 13/289 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G S+ K
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSSERK 304
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 173/289 (59%), Gaps = 13/289 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G ++ K
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSTERK 304
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 171/289 (59%), Gaps = 13/289 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLFG+LG +E+LRLYP + + S++CY+KF + VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFGFLGDIEELRLYPPD-NAPLAFSSKVCYIKFREASSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA-----QQQGPNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G+IPDE +AL + A P +G +P
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTMTSLMPGAGLLPIPTPTPLT 136
Query: 126 IEGVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + DP + G +PQ PP+ D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLGTLGAIPAAALDPNITALGEIPQ-PPIMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G S+ K
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSSERK 304
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 167/282 (59%), Gaps = 11/282 (3%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSP 180
GV + + + DP + G PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTA 196
Query: 181 QELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ HS
Sbjct: 197 DQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 256
Query: 241 TQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
+I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 257 NNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 171/289 (59%), Gaps = 14/289 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLFG+LG +E+LRLYP + + S++CY+KF + VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFGFLGDIEELRLYP-PDNAPLAFSSKVCYIKFRESSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQG-----PNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G+IPDE +AL + A P G +P +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTITSLIPGGGLLPIPTPPVSS 136
Query: 126 IEGVPPNQVISTHDPVLVQH-----GLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
I G+P + + + L + +PQ PP+ D KI+EIRRT+ N+ ++ +
Sbjct: 137 I-GIPLSSLGAIPAAALDHNITAIGDIPQ-PPIMGNVDPSKIDEIRRTVYVGNLNSQTTT 194
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF+ VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 195 ADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVVFGDRPLKINH 254
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G S+ K
Sbjct: 255 SNNAIVKPPELTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSSERK 303
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 168/284 (59%), Gaps = 11/284 (3%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
+ T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D
Sbjct: 16 IPTAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNTPLAFSSKVCYVKFRDPSS 74
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQ 125
VG++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N
Sbjct: 75 VGVAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNP 134
Query: 126 IE--GVPPNQV----ISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESV 178
+ GV + + + DP + G PPL D KI+EIRRT+ N+ ++
Sbjct: 135 LTTLGVSLSSLGAIPAAALDPNIAALGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTT 194
Query: 179 SPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
+ +L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++
Sbjct: 195 TADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKIN 254
Query: 239 HSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 255 HSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/286 (41%), Positives = 168/286 (58%), Gaps = 19/286 (6%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFTFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 ---------GVPPNQVISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EE 176
G P + DP L G +PQ PPL D KI+EIRRT+ N+ +
Sbjct: 137 TLSVSLSSLGAIPAAAL---DPNLATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQ 192
Query: 177 SVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQ 236
+ + +L++FF++VG V ++R E ++A VEF+DQ V AL NG + L+
Sbjct: 193 TTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLK 252
Query: 237 MFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
+ HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 253 INHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 170/283 (60%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF ++G++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFVGEIEELRLYP-PDNTPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 169/286 (59%), Gaps = 16/286 (5%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CY+KF D VG
Sbjct: 18 TTVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNTPLAFSSKVCYIKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP ++ +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLVPGAGLLPIPTSSPLT 136
Query: 128 GVPPNQV---------ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EE 176
V V + DP + G +PQ PPL D KI+EIRRT+ N+ +
Sbjct: 137 AVSSLGVSLSSLGAIPAAALDPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQ 195
Query: 177 SVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQ 236
+ + +L++FF++VG V ++R E ++A VEF+DQ V AL NG + L+
Sbjct: 196 TTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLK 255
Query: 237 MFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
+ HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 INHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 301
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 169/283 (59%), Gaps = 13/283 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRAPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP N +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 128 --GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVS 179
GV + + + DP + G +PQ PPL D KI+EIRRT+ N+ ++ +
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTT 195
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFH 239
+L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++ H
Sbjct: 196 ADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINH 255
Query: 240 STQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
S +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 SNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 298
>gi|268532218|ref|XP_002631237.1| C. briggsae CBR-RSP-7 protein [Caenorhabditis briggsae]
Length = 446
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 158/257 (61%), Gaps = 6/257 (2%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
K K++ VANI+ ATRDQ+ +F YLGK+++L++YP +++ + ++KF DE+C
Sbjct: 8 KNKILHVANISCAATRDQIYNMFNYLGKIQELKVYPSEGNINASTLLKTAFIKFDDERCA 67
Query: 70 GISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGV 129
+ QHLTNTV IDRA+V PY + IPDE+ +G+ +LP HV+N+I+ +
Sbjct: 68 EVGQHLTNTVLIDRAIVCLPYPNQIIPDEETFFNSGGST---TAGQRQLPPHVSNRIQQL 124
Query: 130 -PPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQ 188
N V+ T DP L Q GLP YPPLP D K+EEIRRT+ N+ + + +E++D F
Sbjct: 125 DDGNSVLITVDPTLEQLGLPAYPPLPADTDNGKVEEIRRTVYVGNLPKGIDGKEVLDLFN 184
Query: 189 K-VGTVNYIRFCTRENDT-NKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
G V Y+R + + YA VEFS QA V AL+ +G K + L++ HS +I K
Sbjct: 185 MYFGEVMYVRMASGPDALPCAYAYVEFSQQASVSNALQNDGFEFKERPLKIQHSRVAIIK 244
Query: 247 PEAKSNEAAQREIEEAM 263
P+AK++E A E+EEA+
Sbjct: 245 PQAKTDEQALGEVEEAI 261
>gi|301609359|ref|XP_002934235.1| PREDICTED: hypothetical protein LOC100329115 [Xenopus (Silurana)
tropicalis]
Length = 566
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 176/320 (55%), Gaps = 45/320 (14%)
Query: 6 VAPVKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFD 65
++P +T V+QV N++ T DQM+TLF +LG +E+LRLYP + + S++CYVK+ +
Sbjct: 1 MSPGQTTVIQVTNLSAAVTSDQMRTLFSFLGDIEELRLYP-PDNAPLAFSSKVCYVKYRE 59
Query: 66 EKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQG-----PNSGE----- 115
VG++QHLTNTVFIDRAL+V P G+IP+E +AL + A P +G
Sbjct: 60 PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEETKALSLLAPAPSLSSLLPGAGLLPIPA 119
Query: 116 ----------------------PKLPAHVTNQIEGVPP--NQVISTHDPVL--------V 143
P L +T+ +P VI+T PVL
Sbjct: 120 PTPTPPIASSLASVLRREKVEVPLLSVPLTSLGVNLPTPLEPVITTLAPVLPALTPAIPA 179
Query: 144 QHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIRFCTRE 202
LPQ PPL D K++EIRRT+ N+ ++ + ++L++FF++VG V ++R E
Sbjct: 180 VADLPQ-PPLMGNVDPTKVDEIRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDE 238
Query: 203 NDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEA 262
++A VEFSDQ V AL NG + L++ HS +I KP + +AA +E+EE
Sbjct: 239 TQPTRFAFVEFSDQNSVTRALTFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEV 298
Query: 263 MSRVKEAQNMISAAIDPVIG 282
M RV+EAQ+ ISAAI+P G
Sbjct: 299 MKRVREAQSFISAAIEPETG 318
>gi|348524300|ref|XP_003449661.1| PREDICTED: hypothetical protein LOC100695937 [Oreochromis
niloticus]
Length = 459
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 167/279 (59%), Gaps = 17/279 (6%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T VVQ+ N++ + +QM+TLFG+LG +E+LRLYP + + S++CY+K+ D VG
Sbjct: 7 TPVVQITNLSSAVSSEQMRTLFGFLGDIEELRLYP-PDNAPLSFSSKVCYIKYRDPSSVG 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQG-----PNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G+IP+E +AL + A P G +P Q
Sbjct: 66 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPATPVPSLIPGGGLLPIPTPAPLQ 125
Query: 126 IEGVPP-NQVISTHDP---VLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSP 180
+P N++ + DP VL Q PPL D KI+EIRRT+ N+ ++ +
Sbjct: 126 NLNLPLVNRLSANLDPTASVLAQ------PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTA 179
Query: 181 QELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
++L++FF++VG V ++R E ++A VEF +Q V AL LNG + L++ HS
Sbjct: 180 EQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARALTLNGVMFGDRPLKVNHS 239
Query: 241 TQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+I KP + +AA +E+E M RV+EAQ+ I+AAI+P
Sbjct: 240 NNAIVKPPELTPQAAAKELENVMKRVREAQSTIAAAIEP 278
>gi|148686566|gb|EDL18513.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Mus
musculus]
Length = 626
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 169/286 (59%), Gaps = 16/286 (5%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CY+KF D VG
Sbjct: 34 TTVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNTPLAFSSKVCYIKFRDPSSVG 92
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP ++ +
Sbjct: 93 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLVPGAGLLPIPTSSPLT 152
Query: 128 GVPPNQVISTH---------DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EE 176
V V + DP + G +PQ PPL D KI+EIRRT+ N+ +
Sbjct: 153 AVSSLGVSLSSLGAIPAAALDPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQ 211
Query: 177 SVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQ 236
+ + +L++FF++VG V ++R E ++A VEF+DQ V AL NG + L+
Sbjct: 212 TTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLK 271
Query: 237 MFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
+ HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 272 INHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 317
>gi|410929297|ref|XP_003978036.1| PREDICTED: uncharacterized protein LOC101067881 [Takifugu rubripes]
Length = 451
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 169/276 (61%), Gaps = 11/276 (3%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T VVQV N++ + +QM+TLFG+LG +++LRLYP + ++ S++CY+K+ D VG
Sbjct: 7 TNVVQVTNLSSAVSSEQMRTLFGFLGDIDELRLYP-PDNAALSFSSKVCYIKYRDPSSVG 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQG-----PNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G+IP+E +AL + A P+ G +PA Q
Sbjct: 66 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPSTPVPSLIPSGGLLPIPAPNPLQ 125
Query: 126 IEGVPP-NQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQEL 183
+P N++ ++ D + + PPL D K++EIRRT+ N+ ++ + +L
Sbjct: 126 NLNLPVVNRMSASLD---LAASVSSQPPLMGNVDPTKVDEIRRTVYVGNLNSQTTTADQL 182
Query: 184 VDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQS 243
++FF++VG+V ++R E ++A VEFS+Q V AL NG + L++ HS +
Sbjct: 183 LEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARALTFNGVMFGDRPLKINHSNNA 242
Query: 244 IQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
I KP + +AA +E+E M RV+EAQ+ I+AAI+P
Sbjct: 243 IVKPPELTPQAAAKELESVMKRVREAQSTIAAAIEP 278
>gi|354474059|ref|XP_003499249.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cricetulus griseus]
gi|344246968|gb|EGW03072.1| Splicing factor, arginine/serine-rich 12 [Cricetulus griseus]
Length = 611
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 168/286 (58%), Gaps = 16/286 (5%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG +E+LRLYP + + S++CY+KF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGDIEELRLYP-PDNTPLAFSSKVCYIKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP ++ +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLVPGAGLLPIPTSSPLT 136
Query: 128 GVPPNQVISTH---------DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EE 176
V V + DP + G +PQ PPL D KI+EIRRT+ N+ +
Sbjct: 137 AVSSLGVSLSSLGAIPAAALDPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQ 195
Query: 177 SVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQ 236
+ + +L++FF++VG V ++R E ++A VEF+DQ V AL NG + L+
Sbjct: 196 TTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLK 255
Query: 237 MFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
+ HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 256 INHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 301
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 166/285 (58%), Gaps = 14/285 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CY+KF + VG
Sbjct: 18 TTVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNTPLAFSSKVCYIKFREPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP ++ +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLVPGAGLLPIPTSSPLT 136
Query: 128 GVPPNQV---------ISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EES 177
V V + DP + G PPL D KI+EIRRT+ N+ ++
Sbjct: 137 AVSSLGVSLSSLGAIPAAALDPNITALGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQT 196
Query: 178 VSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQM 237
+ +L++FF++VG V ++R E ++A VEF+DQ V AL NG + L++
Sbjct: 197 TTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 256
Query: 238 FHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 257 NHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 301
>gi|341889048|gb|EGT44983.1| CBN-RSP-7 protein [Caenorhabditis brenneri]
Length = 455
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 158/263 (60%), Gaps = 6/263 (2%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
K K++ VANI+ ATRD + +F YLGK+++L++YP +++ + ++KF DE+C
Sbjct: 8 KNKILHVANISTAATRDHLYNMFNYLGKIQELKVYPSEGNITANTLLKTAFIKFDDERCA 67
Query: 70 GISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGV 129
+ QHLTNTV IDRA+V PY + IPDE+ +G+ +LP HVTN+I+ +
Sbjct: 68 EVGQHLTNTVLIDRAIVCLPYPNQFIPDEESFFNSGGST---TAGQRQLPPHVTNKIQEL 124
Query: 130 PPNQ-VISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQ 188
V+ T DP L Q GLP YPPLP D K+EEIRRT+ N+ + + +E+++ F
Sbjct: 125 EDGSAVLITVDPTLEQLGLPAYPPLPPDTDASKVEEIRRTVYVGNLPKGIDGKEVLEMFN 184
Query: 189 K-VGTVNYIRFCTRENDT-NKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
G V Y+R + + YA VEFS QA V AL+ +G K + L++ HS +I K
Sbjct: 185 MYFGEVMYVRMASGPDALPCAYAYVEFSQQASVSNALQNDGFEFKERPLKIQHSRVAIIK 244
Query: 247 PEAKSNEAAQREIEEAMSRVKEA 269
P+AK++E A EIEEA+ + A
Sbjct: 245 PQAKTDEQALGEIEEAIRLGRSA 267
>gi|308509674|ref|XP_003117020.1| CRE-RSP-7 protein [Caenorhabditis remanei]
gi|308241934|gb|EFO85886.1| CRE-RSP-7 protein [Caenorhabditis remanei]
Length = 466
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 155/257 (60%), Gaps = 6/257 (2%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
K K++ VANI+ ATRD + +F YLGK++++R+YP +++ + ++KF DE+C
Sbjct: 8 KNKILHVANISTAATRDHVYNMFNYLGKIQEMRIYPSEGNITASTLLKTAFIKFDDERCA 67
Query: 70 GISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGV 129
+ QHLTNTV IDRA+V PY + IPDE+ +G+ +LP HVTN+++ +
Sbjct: 68 EVGQHLTNTVLIDRAIVCLPYPNQFIPDEESFFNSGGST---TAGQRQLPPHVTNKVQEL 124
Query: 130 PPN-QVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQ 188
V+ T DP L Q GLP YPPLP D K+EEIRRT+ N+ + + +E+++ F
Sbjct: 125 EDGTSVLITVDPTLEQLGLPAYPPLPADTDYSKVEEIRRTVYVGNLPKGIDGKEVLEMFN 184
Query: 189 -KVGTVNYIRFCTRENDT-NKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
G V Y+R + + YA VEFS QA V AL+ +G K + L++ HS I K
Sbjct: 185 MYFGEVMYVRMASGPDALPCAYAYVEFSQQASVSNALQNDGFEFKERPLKIQHSRVPIIK 244
Query: 247 PEAKSNEAAQREIEEAM 263
P+AK++E A E+EEA+
Sbjct: 245 PQAKTDEQALGEVEEAI 261
>gi|25153309|ref|NP_741039.1| Protein RSP-7, isoform a [Caenorhabditis elegans]
gi|56749455|sp|O01159.3|RSP7_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 7;
AltName: Full=p54
gi|20338921|emb|CAA85414.2| Protein RSP-7, isoform a [Caenorhabditis elegans]
Length = 452
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 156/257 (60%), Gaps = 6/257 (2%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
K K++ VANI+ ATRD + +F YLGK++DL++YP +++ + ++KF DE+CV
Sbjct: 8 KVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCV 67
Query: 70 GISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQI-EG 128
++QHLTNTV ID A+V PY + IPDE+ +G+ +LP HVTN+I E
Sbjct: 68 EVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGST---TAGQRQLPPHVTNKIQES 124
Query: 129 VPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQ 188
+ ++ T DP L Q GLP YPPLP D+ K+EEIRRT+ N+ + V E+++ F
Sbjct: 125 DDGSALLITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELFN 184
Query: 189 K-VGTVNYIRFCTRENDT-NKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
G V Y R + + YA VEFS QA V AL+ +G K + L++ HS +I K
Sbjct: 185 MYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAIIK 244
Query: 247 PEAKSNEAAQREIEEAM 263
P+AK++E A EIEEA+
Sbjct: 245 PQAKTDEQALGEIEEAI 261
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 172/309 (55%), Gaps = 38/309 (12%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYP----------------IA------- 47
T V+QV N++ T +QM+TLF +LG++E+LRLYP IA
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPEWPQVGPEQPYGKRLIAFLHSENR 77
Query: 48 ---RDVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEI 104
+ + S++CYVKF D VG++QHLTNTVFIDRAL+V P G+IP+E +AL +
Sbjct: 78 GDRANAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEESKALSL 137
Query: 105 AAQQQGPNS---GEPKLPAHVTNQIE--GVPPNQV----ISTHDPVLVQHG-LPQYPPLP 154
A S G LP N + GV + + + DP + G +PQ PPL
Sbjct: 138 LAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLM 196
Query: 155 ITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEF 213
D KI+EIRRT+ N+ ++ + +L++FF++VG V ++R E ++A VEF
Sbjct: 197 GNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEF 256
Query: 214 SDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMI 273
+DQ V AL NG + L++ HS +I KP + +AA +E+EE M RV+EAQ+ I
Sbjct: 257 ADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFI 316
Query: 274 SAAIDPVIG 282
SAAI+P G
Sbjct: 317 SAAIEPESG 325
>gi|57525681|ref|NP_001003613.1| splicing regulatory glutamine/lysine-rich protein 1 [Danio rerio]
gi|50417233|gb|AAH78219.1| Zgc:100974 [Danio rerio]
Length = 512
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 162/279 (58%), Gaps = 11/279 (3%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+Q+ N++ + DQM+TLFG+LG +++LRLYP + + S++CY+K+ + VG
Sbjct: 4 TNVIQITNLSAAVSSDQMRTLFGFLGDIDELRLYP-PDNAPLSFSSKVCYIKYREPSSVG 62
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA-----QQQGPNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G+IP+E +AL + A G +P+ T Q
Sbjct: 63 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPATPVANLMSGGGLLPIPSPSTLQ 122
Query: 126 IEGVPPNQV----ISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSP 180
+P + S V + PPL D K++EIRRT+ N+ +S +
Sbjct: 123 NRSLPLANLGVLKSSLDTSVATLSAVSAQPPLMGNVDPSKVDEIRRTVYVGNLNSQSTTA 182
Query: 181 QELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
+L+ FF++VG V ++R E ++A VEF+DQ V AL NG + L++ HS
Sbjct: 183 DQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVARALTYNGVMFGDRPLKINHS 242
Query: 241 TQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+I KP + +AA +E+E+ M +V+EAQ+ I+AAI+P
Sbjct: 243 NNAIVKPPELTPQAAAKELEDVMKKVREAQSTIAAAIEP 281
>gi|432884719|ref|XP_004074556.1| PREDICTED: uncharacterized protein LOC101155617 [Oryzias latipes]
Length = 445
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 170/296 (57%), Gaps = 25/296 (8%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T VVQV N++ + +QM+TLFG+LG +E+LRLYP + ++ S++CY+K+ + VG
Sbjct: 7 TTVVQVTNLSSAVSSEQMRTLFGFLGDIEELRLYP-PDNTTLNFSSKVCYIKYREPSSVG 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQ-----QQGPNSGEPKLPAHVTNQ 125
++QHLTNTVFIDRAL+V P G+IP+E +AL + A P G +P Q
Sbjct: 66 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPVPPVPSLIPGGGLLPIPTPSPLQ 125
Query: 126 IEGVPP-NQVISTHDP---VLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSP 180
+P N++ + P V+ Q PPL D KI+EIRRT+ N+ ++ +
Sbjct: 126 NLNLPLVNRISAGLSPTSSVIAQ------PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTA 179
Query: 181 QELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
+L++FF++VG V ++R E ++A VEF +Q V AL NG + L++ HS
Sbjct: 180 DQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARALTFNGVMFGDRPLKVNHS 239
Query: 241 TQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSHSPVR 296
+I KP + +AA +E+E M RV+EAQ I+AAI+P + K+HS R
Sbjct: 240 NNAIVKPPELTPQAAAKELESVMKRVREAQVTIAAAIEP--------EAKTHSSGR 287
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 172/320 (53%), Gaps = 49/320 (15%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYP-------------IARDVSIPVQSR 57
T V+QV N++ T +QM+TLF +LG++E+LRLYP + D+ I + R
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPEAQQPGPQASAFLLVDLGIYRRRR 77
Query: 58 ------------------------ICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSG 93
+CYVKF D VG++QHLTNTVFIDRAL+V P G
Sbjct: 78 MLEFSAPPPFFNAPLFFPELKMAAVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEG 137
Query: 94 EIPDEQRALEI---AAQQQGPNSGEPKLPAHVTNQIE--GVPPNQV----ISTHDPVLVQ 144
+IP+E +AL + A G G LP N + GV + + + DP +
Sbjct: 138 KIPEEAKALSLLAPAPTMTGLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIAT 197
Query: 145 HG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIRFCTRE 202
G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++R E
Sbjct: 198 LGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDE 256
Query: 203 NDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEA 262
++A VEF+DQ V AL NG + L++ HS +I KP + +AA +E+EE
Sbjct: 257 TQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEV 316
Query: 263 MSRVKEAQNMISAAIDPVIG 282
M RV+EAQ+ ISAAI+P G
Sbjct: 317 MKRVREAQSFISAAIEPESG 336
>gi|339253062|ref|XP_003371754.1| putative splicing factor, arginine/serine-rich 7 [Trichinella
spiralis]
gi|316967948|gb|EFV52301.1| putative splicing factor, arginine/serine-rich 7 [Trichinella
spiralis]
Length = 842
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 150/257 (58%), Gaps = 7/257 (2%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPI-ARDVSIPVQSRICYVKFFDEKC 68
K +VQ+++I+P TR+Q+ +F Y G++E+ R+YP + Q+++CY+++
Sbjct: 119 KVHLVQISSISPLLTREQIYHMFSYFGRIEEFRMYPTDTNQTNFIGQTKLCYIRYVRSSS 178
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPN-SGEPKLPAHVTNQIE 127
+QH+TNTVFIDRAL+ P G+IP+E AL + GP G+ +LP V ++
Sbjct: 179 ADTAQHMTNTVFIDRALICVPVPEGKIPEEDMALMLG----GPTLPGQRQLPLGVVSETR 234
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
V +I T DP L Q GLP YPPL + +EE+RRT+ + V +L+ F
Sbjct: 235 HVDGRDLIVTIDPKLTQLGLPAYPPLSGSLPMSTVEEVRRTVFISGLAADVDKYDLMMFL 294
Query: 188 Q-KVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
+G V Y+R R + + A VEFS Q V+ AL+ NG KG+ L+M+HS SI K
Sbjct: 295 NDNIGEVMYLRMAGRRDAAQRCAYVEFSSQLSVVNALQKNGLLYKGQRLRMWHSNTSIAK 354
Query: 247 PEAKSNEAAQREIEEAM 263
P AK+ + A++E+EEA+
Sbjct: 355 PLAKTLDMAKKEVEEAV 371
>gi|242004168|ref|XP_002436264.1| splicing factor, arginine/serine-rich, putative [Ixodes scapularis]
gi|215499600|gb|EEC09094.1| splicing factor, arginine/serine-rich, putative [Ixodes scapularis]
Length = 363
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 148/271 (54%), Gaps = 63/271 (23%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++T V QV N+AP AT +QM TLFG+LGK+ ++++YP + PV +++CY+++ +
Sbjct: 3 METCVAQVTNVAPTATLEQMSTLFGFLGKILEIKMYPSDEFLLQPV-AKVCYIRYEEPWS 61
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEG 128
VG++QHLTNTVF+DRAL+V P G++PDE RAL + T +
Sbjct: 62 VGVAQHLTNTVFVDRALIVVPVTDGKLPDESRALAL------------------TTPVSA 103
Query: 129 VPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQ 188
VP I+ P LV
Sbjct: 104 VPEEPTIAALSPGLV--------------------------------------------N 119
Query: 189 KVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPE 248
++G V Y+R E+ ++A VEF++Q+ V AL+ NG G++L++ HS SI KP+
Sbjct: 120 QMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGRALQFNGIEFAGRSLKINHSNNSIVKPQ 179
Query: 249 AKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
AKS+EAA +EIEEAM RV+EAQ++I+AAI+P
Sbjct: 180 AKSSEAAHKEIEEAMRRVREAQSLITAAIEP 210
>gi|393906197|gb|EJD74210.1| splicing factor [Loa loa]
Length = 542
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 155/257 (60%), Gaps = 9/257 (3%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPV-QSRICYVKFFDEKCVG 70
+V+ V+NI+ ATR+Q+ LF ++G++++ ++YP + + YVKF D+K V
Sbjct: 9 RVLHVSNISMTATREQIYQLFAFIGRIDEFKIYPSDNHPQLSTFTQKFAYVKFEDQKSVE 68
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS-GEPKLPAHVTNQIEGV 129
++QHLTNTVFIDRALV P S IPDE AL+ GP G+ +LP +V NQI+ +
Sbjct: 69 VAQHLTNTVFIDRALVCIPSISDTIPDEDTALKTG----GPAWPGQRQLPPNVVNQIKDL 124
Query: 130 PPN-QVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQ 188
Q++ T DP L GLP YP L + K+EEIRRT+ NI + +E++ FF
Sbjct: 125 GDGQQMLLTVDPTLAALGLPPYPTLSANTEASKVEEIRRTIYVGNIPKDCGGEEVMKFFN 184
Query: 189 -KVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
+G V Y+R + EN YA VEF++Q V AL+ NG KG+ L++ HS +I K
Sbjct: 185 DNIGEVMYLRMTSGTENLPCAYAYVEFTNQPTVPIALQNNGIEFKGRCLRIQHSRVAIIK 244
Query: 247 PEAKSNEAAQREIEEAM 263
PE K+ + A +E+EEA+
Sbjct: 245 PERKTADMALQEVEEAI 261
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 155/269 (57%), Gaps = 19/269 (7%)
Query: 34 YLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSG 93
+LG++E+LRLYP + + S++CYVKF D VG++QHLTNTVFIDRAL+V P G
Sbjct: 24 FLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEG 82
Query: 94 EIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE---------GVPPNQVISTHDPV 141
+IP+E +AL + A S G LP N + G P + DP
Sbjct: 83 KIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLSVSLSSLGAIPAAAL---DPN 139
Query: 142 LVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIRFC 199
L G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++R
Sbjct: 140 LATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMA 198
Query: 200 TRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREI 259
E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA +E+
Sbjct: 199 GDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKEL 258
Query: 260 EEAMSRVKEAQNMISAAIDPVIGILSKDK 288
EE M RV+EAQ+ ISAAI+P G S+ K
Sbjct: 259 EEVMKRVREAQSFISAAIEPESGKSSERK 287
>gi|324510431|gb|ADY44362.1| Splicing factor, arginine/serine-rich 7 [Ascaris suum]
Length = 497
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 153/257 (59%), Gaps = 11/257 (4%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIP-VQSRICYVKFFDEKCVGI 71
V+ V+NI AT +Q+ LF ++G++ + ++YP + + + +VKF + V I
Sbjct: 10 VLHVSNICMSATNEQIYQLFSFIGRIAEFKMYPTDNHLHLSKFTHKFAFVKFEERISVKI 69
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPN-SGEPKLPAHVTNQIEGVP 130
+QHLTNTVFIDRAL+ TP+ S IPDE+ AL+ GP G+ +LP +V N+++ +
Sbjct: 70 AQHLTNTVFIDRALICTPFQSDTIPDEETALKCG----GPALCGQRQLPPNVLNKVQDLG 125
Query: 131 PN-QVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQ- 188
Q++ T DP L GLP YP L D ++IEEIRRT+ N+ + EL+ FF
Sbjct: 126 DGQQMLYTIDPTLTALGLPPYPALSANMDERRIEEIRRTIYVGNLPKECDSNELMWFFND 185
Query: 189 KVGTVNYIRFCTRENDT--NKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQK 246
+G V Y+R + ND+ YA +EF+ Q V+ AL+ NG KGK+L + HS +I K
Sbjct: 186 NIGEVMYLRMASF-NDSLPCAYAYIEFASQPTVLTALQNNGIIFKGKSLCVQHSRVAIVK 244
Query: 247 PEAKSNEAAQREIEEAM 263
PE K+ A +E+EEA+
Sbjct: 245 PERKTMNMALQEVEEAI 261
>gi|391329197|ref|XP_003739062.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Metaseiulus occidentalis]
Length = 399
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 143/240 (59%), Gaps = 11/240 (4%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQ--SRICYVKFFDE 66
V+ +V+QV+NIA +R+Q+ LF ++G VED RLYP V P++ +RICY+KF +
Sbjct: 5 VEHRVIQVSNIASGVSREQLLALFNHVGSVEDCRLYP---SVEQPLENGTRICYIKFKEL 61
Query: 67 KCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPA-----H 121
VG++ HL+NT+F++R L++ P +S ++PDEQ A+ A +S + +P
Sbjct: 62 WSVGVAMHLSNTIFMERPLLIFPMDSDQVPDEQFAIAELAPGAPISSNDEDIPELGGIRK 121
Query: 122 VTNQIE-GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSP 180
+TN+I QVI+T DP L G P YP LP + +EEIRRT+ N++ +++
Sbjct: 122 LTNEISTNAAGKQVINTIDPSLALKGAPNYPALPAGLSDENVEEIRRTIYVGNLDPNLTN 181
Query: 181 QELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
+ ++ FF + G + Y+R + K+A VEF++QA V A + NGT L + + + HS
Sbjct: 182 EIVMKFFSQCGEIKYVRMGGETGASMKHAFVEFTEQASVGNAFQFNGTLLGSRAMVVSHS 241
>gi|296475869|tpg|DAA17984.1| TPA: splicing factor, arginine/serine-rich 12-like [Bos taurus]
Length = 325
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 142/245 (57%), Gaps = 12/245 (4%)
Query: 49 DVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQ 108
+ + S++CYVKF D VG++QHLTNTVFIDRAL+V P G+IP+E +AL + A
Sbjct: 7 NAPLAFSSKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPA 66
Query: 109 QGPNS---GEPKLPAHVTNQIE--GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYD 158
S G LP N + GV + + + DP + G +PQ PPL D
Sbjct: 67 PTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVD 125
Query: 159 TKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQA 217
KI+EIRRT+ N+ ++ + +L++FF++VG V ++R E ++A VEF+DQ
Sbjct: 126 PSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQN 185
Query: 218 CVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAI 277
V AL NG + L++ HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI
Sbjct: 186 SVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAI 245
Query: 278 DPVIG 282
+P G
Sbjct: 246 EPESG 250
>gi|198429455|ref|XP_002129672.1| PREDICTED: similar to splicing factor, arginine/serine-rich 12
[Ciona intestinalis]
Length = 373
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 145/271 (53%), Gaps = 42/271 (15%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV NIAP AT +Q+ TLF +LG + L+P D + P +++ ++K+ D VG
Sbjct: 4 TDVIQVTNIAPTATLEQIHTLFDHLGTFVEFELFPRNPDPNNP-GTKVAFIKYADPSSVG 62
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVP 130
++QHLT+TVFIDRAL+ PY G IP+E A++ A PA Q GV
Sbjct: 63 VAQHLTSTVFIDRALICVPYTDGIIPNETVAMQFAT------------PATALIQAGGV- 109
Query: 131 PNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIE-ESVSPQELVDFFQK 189
D K++EI+RT+ N++ + + +L+ FF
Sbjct: 110 --------------------------IDQTKLDEIKRTIYVGNLDSKQATADQLMTFFGT 143
Query: 190 VGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEA 249
G V ++R E ++A +EF+ V A+KLNGT + L++ HS +I KP
Sbjct: 144 CGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAMKLNGTLFGDRALKINHSNNAIVKPAV 203
Query: 250 KS-NEAAQREIEEAMSRVKEAQNMISAAIDP 279
K N+ A +EI+EAM RV+EAQ++IS A+DP
Sbjct: 204 KPVNDTATKEIDEAMKRVREAQSLISRALDP 234
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 140/242 (57%), Gaps = 12/242 (4%)
Query: 52 IPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEI---AAQQ 108
+ S++CYVKF D VG++QHLTNTVFIDRAL+V P G+IP+E +AL + A
Sbjct: 21 LAFSSKVCYVKFRDRSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLVPAPTM 80
Query: 109 QGPNSGEPKLPAHVTNQIE--GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKK 161
G LP N + GV + + + DP + G +PQ PPL D K
Sbjct: 81 TSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQ-PPLMGNVDPSK 139
Query: 162 IEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVI 220
I+EIRRT+ N+ ++ + +L++FF++VG V ++R E ++A VEF+DQ V
Sbjct: 140 IDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVP 199
Query: 221 PALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPV 280
AL NG + L++ HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P
Sbjct: 200 RALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPE 259
Query: 281 IG 282
G
Sbjct: 260 SG 261
>gi|392342422|ref|XP_003754583.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Rattus norvegicus]
Length = 775
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 163/300 (54%), Gaps = 25/300 (8%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGIS 72
V+QV N++ DQ +TLF +L ++E+LR Y + ++ S++CY+KF D +G++
Sbjct: 235 VIQVRNLSLXXGSDQ-RTLFSFLEEIEELRXY-LPDNIPPAFFSKVCYIKFHDPSSIGVA 292
Query: 73 QHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPK----LPAHVTNQIE- 127
QHL+NTVFID+ L+V P G+I +E ++L + S P LP +N +
Sbjct: 293 QHLSNTVFIDKTLIVVPCAEGKIAEEAKSLSLPTLAPAMTSLVPGTCSTLPTPASNLLTA 352
Query: 128 -----------GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-E 175
G P + DP + +PQ PPL D + +EIRRT+ N+
Sbjct: 353 MSSLGVSLSNMGAIPKAAL---DPNITLGEIPQ-PPLTGNVDPSRTDEIRRTIHVGNLNS 408
Query: 176 ESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTL 235
+++S ++++FF++VG V + E ++A VEF+DQ V AL NG + L
Sbjct: 409 QTMSADQILEFFKQVGEVKFFPMADDETQPTQFAFVEFADQNSVPRALAFNGVTFGDRGL 468
Query: 236 QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK-EAQNMISAAIDPVIGILSKDKKKSHSP 294
++ HS +I KP + +A +E+EE M RV+ EAQ+ ISAAI+P G S ++K SP
Sbjct: 469 KINHSQNAIVKPPEMAPQAVVKELEETMKRVREEAQSFISAAIEPKSG-KSNERKSRQSP 527
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 139/238 (58%), Gaps = 12/238 (5%)
Query: 56 SRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEI---AAQQQGPN 112
S++CYVKF D VG++QHLTNTVFIDRAL+V P G+IP+E +AL + A
Sbjct: 27 SKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLPPAPTMTSLM 86
Query: 113 SGEPKLPAHVTNQIE--GVPPNQV----ISTHDPVLVQHG-LPQYPPLPITYDTKKIEEI 165
G LP N + GV + + + DP + G +PQ PPL D KI+EI
Sbjct: 87 PGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNITTLGEIPQ-PPLMGNVDPSKIDEI 145
Query: 166 RRTLVAINI-EESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
RRT+ N+ ++ + +L++FF++VG V ++R E ++A VEF+DQ V AL
Sbjct: 146 RRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALA 205
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
NG + L++ HS +I KP + +AA +E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 206 FNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG 263
>gi|392350797|ref|XP_003750759.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Rattus norvegicus]
Length = 775
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 163/300 (54%), Gaps = 25/300 (8%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGIS 72
V+QV N++ DQ +TLF +L ++E+LR Y + ++ S++CY+KF D +G++
Sbjct: 235 VIQVRNLSLXXGSDQ-RTLFSFLEEIEELRXY-LPDNIPPAFFSKVCYIKFHDPSSIGVA 292
Query: 73 QHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPK----LPAHVTNQIE- 127
QHL+NTVFID+ L+V P G+I +E ++L + S P LP +N +
Sbjct: 293 QHLSNTVFIDKTLIVVPCAEGKIAEEAKSLSLPTLAPAMTSLVPGTCSTLPTPASNLLTA 352
Query: 128 -----------GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-E 175
G P + DP + +PQ PPL D + +EIRRT+ N+
Sbjct: 353 MSSLGVSLSNMGAIPKAAL---DPNITLGEIPQ-PPLTGNVDPSRTDEIRRTIHVGNLNS 408
Query: 176 ESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTL 235
+++S ++++FF++VG V + E ++A VEF+DQ V AL NG + L
Sbjct: 409 QTMSADQILEFFKQVGEVKFFPMADDETQPTQFAFVEFADQNSVPRALAFNGVTFGDRGL 468
Query: 236 QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK-EAQNMISAAIDPVIGILSKDKKKSHSP 294
++ HS +I KP + +A +E+EE M RV+ EAQ+ ISAAI+P G S ++K SP
Sbjct: 469 KINHSQNAIVKPPEMAPQAVVKELEETMKRVRGEAQSFISAAIEPKSG-KSNERKSRQSP 527
>gi|256092928|ref|XP_002582129.1| SFRS11 protein [Schistosoma mansoni]
gi|353228828|emb|CCD74999.1| putative sfrs11 protein [Schistosoma mansoni]
Length = 581
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
K +VVQV N++P AT +Q++TLFG++G +E++ +YP D + S++CY+++ +
Sbjct: 6 KNRVVQVTNVSPSATSEQLRTLFGHVGVLEEVVVYP--SDDKEELASKVCYIRYQEPINA 63
Query: 70 GISQHLTNTVFIDRALVVTPYNSGE---IPDEQRALEIAAQQQGPNSGEPKLPA------ 120
++ HL NTVF+DRAL+V P SG+ IPDE+ A + A PN+ LP
Sbjct: 64 EVALHLNNTVFLDRALIVLPL-SGDRDTIPDEKYANLVRAP---PNTAAGVLPRTADWPL 119
Query: 121 HVTNQIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSP 180
V + + G P QVI T +P L P YPPLP T D +IEEIRRT++ N++ +
Sbjct: 120 DVISMVVGRPGEQVIHTMEPRLSSLAFPLYPPLPATTDGSRIEEIRRTILVTNLDPKTTG 179
Query: 181 QELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
++++FF K V +R D ++ A VEF+ Q +I A L G L G+ + + HS
Sbjct: 180 DQVLEFFNKHAEVRCVRMAG--TDFDRAAYVEFTQQPSIIKAFGLMGATLNGRQIMVQHS 237
Query: 241 TQSIQKP 247
+I KP
Sbjct: 238 NCAIIKP 244
>gi|358339035|dbj|GAA47167.1| splicing factor arginine/serine-rich 12 [Clonorchis sinensis]
Length = 1228
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 137/246 (55%), Gaps = 9/246 (3%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
V+ K+VQV N++P AT +Q++TLFG++G +E+ LYP D S++ Y+++ D
Sbjct: 668 VRNKIVQVTNVSPSATTEQLRTLFGHIGVLEEFVLYP--GDEKEEPASKVAYIRYHDPIN 725
Query: 69 VGISQHLTNTVFIDRALVVTPYNSG--EIPDEQRALEIAAQQQGPNSGEPK---LPAHVT 123
++ HL NTVF+DRAL+V P G IPDE+ A + A P+ P V
Sbjct: 726 AEVALHLNNTVFLDRALIVLPLVDGLETIPDEKYANLVRAPPNTAAGVLPRTADWPLDVI 785
Query: 124 NQIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQEL 183
+ + G P QVI T +P L P YPPLP T D +IEEIRRT++ N++ + ++
Sbjct: 786 SMVVGRPGEQVIHTIEPRLSTLVFPLYPPLPATTDGNRIEEIRRTILVTNLDPKTTGDQV 845
Query: 184 VDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQS 243
++FF K V +R E D + A VEF+ Q +I A L G L G+ + + HS +
Sbjct: 846 LEFFNKHAEVRCVRMAGTEFD--RAAYVEFTQQPSIIKAFGLMGATLNGRQIMVQHSNCA 903
Query: 244 IQKPEA 249
I KP +
Sbjct: 904 IIKPAS 909
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 139/243 (57%), Gaps = 13/243 (5%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
+ TK++QV+N+A AT +Q++ LF ++G+VEDL+L+P +I VQS++C+VKF D
Sbjct: 8 LNTKLIQVSNVAHNATLEQLKVLFSFIGEVEDLKLFP--ESPAITVQSKVCFVKFVDPSS 65
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQ----GPNSGEPKLPAHVTN 124
V I+ HLTNTVFID++L+V P + + +E++AL++ A G G LP
Sbjct: 66 VPIALHLTNTVFIDKSLIVVPVSDEPVSEEEKALQLVAASSALALGMGDGGGILPTPAL- 124
Query: 125 QIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELV 184
+P Q++S+ + PP D K+EEIRRT+ N++ ++ + L+
Sbjct: 125 ----IP--QLMSSSGNTIAVPSSVPPPPPLTNVDANKVEEIRRTVFVNNLDPEITAEMLL 178
Query: 185 DFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
FF G + YIR + +YA +EF++ ++ AL+ +G GK +++ HS ++
Sbjct: 179 SFFSSCGDIKYIRMGGDDGKPTRYAYIEFAETQAIVSALQYSGAIFGGKPIKVTHSKNAV 238
Query: 245 QKP 247
KP
Sbjct: 239 SKP 241
>gi|47228418|emb|CAG05238.1| unnamed protein product [Tetraodon nigroviridis]
Length = 386
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 141/267 (52%), Gaps = 38/267 (14%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T VVQV N++ + +QM+TLFG+LG +++LRLYP + ++ S++CY+K+ D VG
Sbjct: 2 TNVVQVTNLSSAVSSEQMRTLFGFLGDIDELRLYP-PDNAALSFSSKVCYIKYRDPSSVG 60
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS---GEPKLPAHVTNQIE 127
++QHLTNTVFIDRAL+V P G+IP+E +AL + A S G LP +N ++
Sbjct: 61 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPSTPVPSLIPGGGLLPIPASNPLQ 120
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIE------------ 175
+ V + + +P PPL D K++EIRRT+ N+
Sbjct: 121 NLNLPIVNRMSAGLEIAASVPSQPPLMGNVDPTKVDEIRRTVYVGNLNSQVAKCQICGIR 180
Query: 176 ---------------------ESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFS 214
++ + ++L++FF++VG+V ++R E ++A VEFS
Sbjct: 181 AEQRPRVEGQLMEGELDSFCLQTTTAEQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFS 240
Query: 215 DQACVIPALKLNGTNLKGKTLQ-MFHS 240
+Q V AL NG + L+ +F+S
Sbjct: 241 EQDSVARALTFNGVMFGDRPLKSVFNS 267
>gi|47937510|gb|AAH72078.1| LOC432318 protein, partial [Xenopus laevis]
Length = 334
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 132/278 (47%), Gaps = 79/278 (28%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P A+ +QM TLFG+LGK+E+LRL+P D +PV SR+C+VKF D
Sbjct: 5 TDVIQVTNVSPSASSEQMITLFGFLGKIEELRLFP-PDDSPLPVTSRVCFVKFQDPDSAV 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVP 130
++QHLTNTVF+DRAL+V PY G IPDE +AL + A PA N + G+
Sbjct: 64 VAQHLTNTVFVDRALIVVPYAEGIIPDEAKALSLVA------------PA---NAVAGLL 108
Query: 131 PNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV 190
P + LP PL ++
Sbjct: 109 PGGAL-----------LPTPNPL----------------------------------SQI 123
Query: 191 GTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTL---------QMFHST 241
G V DT AL +P LN +L L ++ H T
Sbjct: 124 GAVPLAALGAPTLDTTLAAL--------TLPGANLNSQSLAADQLLKLMSTVDPKLNHVT 175
Query: 242 QSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+ P KS+ ++ ++IEEAM RV+EAQ++ISAAI+P
Sbjct: 176 AGLVSPNMKSDTSS-KDIEEAMKRVREAQSLISAAIEP 212
>gi|223647650|gb|ACN10583.1| Splicing factor arginine/serine-rich 11 [Salmo salar]
Length = 465
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 140/271 (51%), Gaps = 67/271 (24%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P T +QM+TLFG+LG +E+L+L+P + S+PV SR+C+VKF + + VG
Sbjct: 2 TNVIQVTNVSPSTTSEQMRTLFGFLGNIEELKLFP-PDESSLPVTSRVCFVKFLESESVG 60
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEG-V 129
+SQHLTNTVF+DRAL+V P+ G IPDE +AL + A PA N + G +
Sbjct: 61 VSQHLTNTVFVDRALIVVPFAEGVIPDESKALSLLA------------PA---NAVAGCM 105
Query: 130 PPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQEL-VDFFQ 188
P ++ T +P+ G+P D + A+ + +++PQ L DF +
Sbjct: 106 PGGGLLPTPNPLASMGGVPLSALGNPNMD---------HMAAMGMSGNINPQTLSADFLK 156
Query: 189 KVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPE 248
+ +++ + N A +I + N +N
Sbjct: 157 LMQSMDPTKM-------NPMA------AGMMINSGMKNDSN------------------- 184
Query: 249 AKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+EIEEAM RV+EAQ++ISAAI+P
Sbjct: 185 --------KEIEEAMKRVREAQSLISAAIEP 207
>gi|410921612|ref|XP_003974277.1| PREDICTED: serine/arginine-rich splicing factor 11-like [Takifugu
rubripes]
Length = 475
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 68/272 (25%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P T +QM+TLFG+LG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 5 THVIQVTNVSPSTTSEQMRTLFGFLGNIEELKLFP-PDDSPLPVTSRVCFVKFHESESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEG-V 129
+SQHLTNTVF+DRAL+V P+ G IPDE +A+ + A PA N + G +
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGVIPDESKAMSLLA------------PA---NAVAGMM 108
Query: 130 PPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEE-SVSPQEL-VDFF 187
P ++ T +P+ G P +E+I A+ I+ +++PQ L DF
Sbjct: 109 PGGGLLPTPNPLATMAGTPFG-----GLGAPNMEQI----AAMGIQGPNMNPQALSADFL 159
Query: 188 QKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKP 247
+ + +++ L + + P LK
Sbjct: 160 KLMQSMD-------------PKLNPLAAGLNLSPGLK----------------------- 183
Query: 248 EAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+A+ +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 184 ----TDASSKEIEEAMKRVREAQSLISAAIEP 211
>gi|47214877|emb|CAG01181.1| unnamed protein product [Tetraodon nigroviridis]
Length = 475
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 143/272 (52%), Gaps = 68/272 (25%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P T +QM+TLFG+LG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 1 THVIQVTNVSPSTTSEQMRTLFGFLGNIEELKLFP-PDDSPLPVTSRVCFVKFHESESVG 59
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEG-V 129
+SQHLTNTVF+DRAL+V P+ G IPDE +A+ + A PA N + G +
Sbjct: 60 VSQHLTNTVFVDRALIVVPFAEGVIPDESKAMSLLA------------PA---NAVAGMM 104
Query: 130 PPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEE-SVSPQEL-VDFF 187
P ++ T +P+ G P + L +E+I A+ I+ +++PQ L DF
Sbjct: 105 PGGGLLPTPNPLATIAGTP-FGGL----GAPNMEQI----AAMGIQGPNMNPQALSADFL 155
Query: 188 QKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKP 247
+ + +++ L + + P LK
Sbjct: 156 KLMQSMD-------------PKLNPLAAGLNLSPGLK----------------------- 179
Query: 248 EAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+A+ +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 180 ----TDASSKEIEEAMKRVREAQSLISAAIEP 207
>gi|348535834|ref|XP_003455403.1| PREDICTED: serine/arginine-rich splicing factor 11-like
[Oreochromis niloticus]
Length = 456
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 134/270 (49%), Gaps = 65/270 (24%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P T +QM+TLFG+LG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 5 THVIQVTNVSPSTTSEQMRTLFGFLGTIEELKLFP-PDDSPLPVTSRVCFVKFLEAESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEG-V 129
+SQHLTNTVF+DRAL+V P+ G IPDE +A+ + A PA N + G +
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGVIPDESKAMSLLA------------PA---NAVAGMM 108
Query: 130 PPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQK 189
P ++ T +P+ P + I + +++PQ L F K
Sbjct: 109 PGGGLLPTPNPLASMGATP--------FGGLGAPSIEQMAAMGMPGPNMNPQALSADFLK 160
Query: 190 VGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEA 249
+ + + N A + S P LK + +N
Sbjct: 161 L-------MQSMDPKLNLAAGLNLS------PGLKADASN-------------------- 187
Query: 250 KSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+EIEEAM RV+EAQ++ISAAI+P
Sbjct: 188 -------KEIEEAMKRVREAQSLISAAIEP 210
>gi|312076386|ref|XP_003140837.1| hypothetical protein LOAG_05252 [Loa loa]
Length = 322
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 7/181 (3%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQS-RICYVKFFDEKC 68
+ +V+ V+NI+ ATR+Q+ LF ++G++++ ++YP + + + YVKF D+K
Sbjct: 132 RFRVLHVSNISMTATREQIYQLFAFIGRIDEFKIYPSDNHPQLSTFTQKFAYVKFEDQKS 191
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS-GEPKLPAHVTNQIE 127
V ++QHLTNTVFIDRALV P S IPDE AL+ GP G+ +LP +V NQI+
Sbjct: 192 VEVAQHLTNTVFIDRALVCIPSISDTIPDEDTALKTG----GPAWPGQRQLPPNVVNQIK 247
Query: 128 GVPPN-QVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDF 186
+ Q++ T DP L GLP YP L + K+EEIRRT+ NI + +E++ F
Sbjct: 248 DLGDGQQMLLTVDPTLAALGLPPYPTLSANTEASKVEEIRRTIYVGNIPKDCGGEEVMKF 307
Query: 187 F 187
F
Sbjct: 308 F 308
>gi|402594291|gb|EJW88217.1| hypothetical protein WUBG_00876 [Wuchereria bancrofti]
Length = 221
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 114/195 (58%), Gaps = 8/195 (4%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQS-RICYVKFFDEKC 68
+ +V+ V+NI+ ATR+Q+ LF ++G++++ ++YP + + + YVKF D+K
Sbjct: 7 RFRVLHVSNISMTATREQIYQLFAFIGRIDEFKIYPSDNHPQLSTFTQKFAYVKFEDQKS 66
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS-GEPKLPAHVTNQIE 127
V ++QHLTNTVFIDRALV P S IPDE AL+ GP G+ +LP +V NQI+
Sbjct: 67 VEVAQHLTNTVFIDRALVCIPSISDTIPDEDTALKTG----GPAWPGQRQLPPNVVNQIK 122
Query: 128 GVPPN-QVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDF 186
+ Q++ T DP L GLP YP L + K+EEIRRT+ NI + E++ F
Sbjct: 123 DLGDGQQMLLTVDPTLTALGLPPYPTLSANTEASKVEEIRRTVYVGNIPKDCVGDEVMKF 182
Query: 187 FQ-KVGTVNYIRFCT 200
F +G V CT
Sbjct: 183 FNDNIGEVGESFTCT 197
>gi|223649478|gb|ACN11497.1| Splicing factor arginine/serine-rich 11 [Salmo salar]
Length = 465
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 135/269 (50%), Gaps = 56/269 (20%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T VVQV N++P T +QM+ LFG+LG +E+L+L+P + +PV SR+C+VKF + + VG
Sbjct: 5 TNVVQVTNVSPSTTSEQMRMLFGFLGTIEELKLFP-PDESPLPVTSRVCFVKFQESESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVP 130
+SQHLTNTVF+DRAL+V P+ G IP+E +AL + A PA+ I +P
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGVIPEEAKALSLLA------------PANAVAGI--LP 109
Query: 131 PNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV 190
++ T +P+ PQ P + E N +++PQ
Sbjct: 110 GGGLLPTPNPM----SNPQMGGNPFGGPSM---EAMAAFGFPNPNMNMNPQSFP------ 156
Query: 191 GTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAK 250
T ++F ++ + + V + + P LK + +N
Sbjct: 157 -TDQLLKFMSQVDPKMNHMGVGMNMNINMNPGLKADSSN--------------------- 194
Query: 251 SNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+EIEEAM RV+EAQ++ISAAI+P
Sbjct: 195 ------KEIEEAMKRVREAQSLISAAIEP 217
>gi|47220375|emb|CAF98474.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV N++P AT +QM+TLFG+LG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 1 TKVVQVTNVSPSATSEQMRTLFGFLGTIEELKLFP-PDDSPMPVTSRVCFVKFQEPESVG 59
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
+SQHLTNTVF+DRAL+V P+ G IPDE +AL + A
Sbjct: 60 VSQHLTNTVFVDRALIVVPFAEGSIPDEAKALSLLA 95
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 24/27 (88%)
Query: 253 EAAQREIEEAMSRVKEAQNMISAAIDP 279
+A+ +EIEEAM RV+E Q++ISAAI+P
Sbjct: 175 DASSKEIEEAMRRVRETQSLISAAIEP 201
>gi|229367964|gb|ACQ58962.1| Splicing factor arginine/serine-rich 11 [Anoplopoma fimbria]
Length = 350
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV N++P T +QM+TLFG+LG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 5 TKVVQVTNVSPSTTSEQMRTLFGFLGTIEELKLFP-PDDSQMPVTSRVCFVKFQEPESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
+SQHLTNTVF+DRAL+V P+ G IPDE +AL + A
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGSIPDEAKALSLLA 99
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 25/27 (92%)
Query: 253 EAAQREIEEAMSRVKEAQNMISAAIDP 279
+A+ +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 181 DASNKEIEEAMKRVREAQSLISAAIEP 207
>gi|432917036|ref|XP_004079432.1| PREDICTED: serine/arginine-rich splicing factor 11-like isoform 1
[Oryzias latipes]
Length = 448
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 6/126 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV N++P T +QM+TLFG+LG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 5 TKVVQVTNVSPSTTSEQMRTLFGFLGTIEELKLFP-PDDSPMPVTSRVCFVKFQEPESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQG-----PNSGEPKLPAHVTNQ 125
+SQHLTNTVF+DRAL+V P+ G IPDE +AL + A P G P +TN
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGSIPDEAKALSLLAPANAVAGILPGGGLLPTPNPLTNP 123
Query: 126 IEGVPP 131
G P
Sbjct: 124 ALGANP 129
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 25/27 (92%)
Query: 253 EAAQREIEEAMSRVKEAQNMISAAIDP 279
+A+ +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 181 DASNKEIEEAMKRVREAQSLISAAIEP 207
>gi|432917038|ref|XP_004079433.1| PREDICTED: serine/arginine-rich splicing factor 11-like isoform 2
[Oryzias latipes]
Length = 450
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 6/126 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV N++P T +QM+TLFG+LG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 5 TKVVQVTNVSPSTTSEQMRTLFGFLGTIEELKLFP-PDDSPMPVTSRVCFVKFQEPESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQG-----PNSGEPKLPAHVTNQ 125
+SQHLTNTVF+DRAL+V P+ G IPDE +AL + A P G P +TN
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGSIPDEAKALSLLAPANAVAGILPGGGLLPTPNPLTNP 123
Query: 126 IEGVPP 131
G P
Sbjct: 124 ALGANP 129
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 253 EAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKD 287
+A+ +EIEEAM RV+EAQ++ISAAI+P + +D
Sbjct: 181 DASNKEIEEAMKRVREAQSLISAAIEPGRKCIYRD 215
>gi|410923691|ref|XP_003975315.1| PREDICTED: serine/arginine-rich splicing factor 11-like [Takifugu
rubripes]
Length = 450
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV N++P AT +QM+TLFG+LG +++L+L+P D +PV SR+C+VKF + + VG
Sbjct: 5 TKVVQVTNVSPSATSEQMRTLFGFLGTIDELKLFP-PDDSPMPVTSRVCFVKFQEPESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
+SQHLTNTVF+DRAL+V P+ G IPDE +AL + A
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGSIPDEAKALSLLA 99
>gi|33877173|gb|AAH02784.1| SFRS11 protein, partial [Homo sapiens]
Length = 321
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 150
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 151 GAVPLAALGAPTLDPALAALGLP 173
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 15/72 (20%)
Query: 222 ALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK 267
AL L G NL ++L ++ H + P KS+ ++ +EIEEAM RV+
Sbjct: 169 ALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVR 227
Query: 268 EAQNMISAAIDP 279
EAQ++ISAAI+P
Sbjct: 228 EAQSLISAAIEP 239
>gi|116283821|gb|AAH32727.1| SFRS11 protein [Homo sapiens]
Length = 246
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 150
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 151 GAVPLAALGAPTLDPALAALGLP 173
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 15/72 (20%)
Query: 222 ALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK 267
AL L G NL ++L ++ H + P KS+ ++ +EIEEAM RV+
Sbjct: 169 ALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVR 227
Query: 268 EAQNMISAAIDP 279
EAQ++ISAAI+P
Sbjct: 228 EAQSLISAAIEP 239
>gi|33874948|gb|AAH09840.1| SFRS11 protein, partial [Homo sapiens]
Length = 247
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 150
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 151 GAVPLAALGAPTLDPALAALGLP 173
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 15/72 (20%)
Query: 222 ALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK 267
AL L G NL ++L ++ H + P KS+ ++ +EIEEAM RV+
Sbjct: 169 ALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVR 227
Query: 268 EAQNMISAAIDP 279
EAQ++ISAAI+P
Sbjct: 228 EAQSLISAAIEP 239
>gi|348501200|ref|XP_003438158.1| PREDICTED: serine/arginine-rich splicing factor 11-like
[Oreochromis niloticus]
Length = 451
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV N++P T +QM+TLFG+LG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 5 TKVVQVTNVSPSTTSEQMRTLFGFLGTIEELKLFP-PDDSPMPVTSRVCFVKFQEPESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
+SQHLTNTVF+DRAL+V P+ G IPDE +AL + A
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGSIPDEAKALSLLA 99
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 253 EAAQREIEEAMSRVKEAQNMISAAIDP 279
+AA +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 180 DAANKEIEEAMKRVREAQSLISAAIEP 206
>gi|427798071|gb|JAA64487.1| Putative splicing factor arginine/serine-rich, partial
[Rhipicephalus pulchellus]
Length = 381
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 104/148 (70%), Gaps = 2/148 (1%)
Query: 133 QVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQEL-VDFFQKVG 191
QVI+T DP L GLP YPPLP T D K+EEIRRT+ N++ S + ++L FF ++G
Sbjct: 41 QVITTQDPTLAALGLPPYPPLPATMDPAKVEEIRRTVYVGNLDSSATTEQLL-KFFSQMG 99
Query: 192 TVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKS 251
V Y+R E+ ++A VEF++Q+ V AL+ NG G++L++ HS +I KP+AKS
Sbjct: 100 EVKYVRMAGGESQPTRFAFVEFTEQSSVGRALQFNGIEFCGRSLKINHSNNAIVKPQAKS 159
Query: 252 NEAAQREIEEAMSRVKEAQNMISAAIDP 279
+EAA +EIEEAM RV+EAQ++I+AAI+P
Sbjct: 160 SEAAHKEIEEAMRRVREAQSLITAAIEP 187
>gi|281346251|gb|EFB21835.1| hypothetical protein PANDA_015444 [Ailuropoda melanoleuca]
Length = 211
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 2 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 60
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 61 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 120
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 121 GAVPLAALGAPTLDPALAALGLP 143
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 15/72 (20%)
Query: 222 ALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK 267
AL L G NL ++L ++ H + P KS+ ++ +EIEEAM RV+
Sbjct: 139 ALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVR 197
Query: 268 EAQNMISAAIDP 279
EAQ++ISAAI+P
Sbjct: 198 EAQSLISAAIEP 209
>gi|432854538|ref|XP_004067950.1| PREDICTED: uncharacterized protein LOC101163805 [Oryzias latipes]
Length = 457
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P T +QM+TLFGYLG +E+L+L+P D +PV SR+C+VKF + + VG
Sbjct: 5 THVIQVTNVSPSTTSEQMRTLFGYLGTIEELKLFP-PDDSPLPVTSRVCFVKFLEPESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
+SQHLTNTVF+DRAL+V P+ G IPDE +A+ + A
Sbjct: 64 VSQHLTNTVFVDRALIVVPFAEGVIPDESKAMSLLA 99
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 253 EAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSH 292
+++ +EIEEAM RV+EAQ++ISAAI+P KD K H
Sbjct: 185 DSSNKEIEEAMKRVREAQSLISAAIEPGS---KKDDKGKH 221
>gi|33878597|gb|AAH17359.1| SFRS11 protein, partial [Homo sapiens]
Length = 394
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 150
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 151 GAVPLAALGAPTLDPALAALGLP 173
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 15/72 (20%)
Query: 222 ALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK 267
AL L G NL ++L ++ H + P KS+ ++ +EIEEAM RV+
Sbjct: 169 ALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVR 227
Query: 268 EAQNMISAAIDP 279
EAQ++ISAAI+P
Sbjct: 228 EAQSLISAAIEP 239
>gi|71896851|ref|NP_001026467.1| splicing factor, arginine/serine-rich 11 [Gallus gallus]
gi|53133844|emb|CAG32251.1| hypothetical protein RCJMB04_20o8 [Gallus gallus]
Length = 457
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 6 VAPVKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFD 65
+A T V+QV N++P A+ +QM+TLFG+LGK+E+LRL+P D +PV SR+C+VKF D
Sbjct: 1 MASSSTDVIQVTNVSPSASSEQMRTLFGFLGKIEELRLFP-PDDSPLPVSSRVCFVKFHD 59
Query: 66 EKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 60 PDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 100
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 221 PALKLNGTNLKGKTL---------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQN 271
P LN +L L ++ H + P KS+ ++ +EIEEAM RV+EAQ+
Sbjct: 147 PGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQS 205
Query: 272 MISAAIDP 279
+ISAAI+P
Sbjct: 206 LISAAIEP 213
>gi|12847619|dbj|BAB27642.1| unnamed protein product [Mus musculus]
Length = 365
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 25 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 83
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 84 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 119
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 167 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 225
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 226 ISAAIEP 232
>gi|47124103|gb|AAH69945.1| Sfrs11 protein, partial [Mus musculus]
Length = 392
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 25 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 83
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 84 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 119
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 167 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 225
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 226 ISAAIEP 232
>gi|26325358|dbj|BAC26433.1| unnamed protein product [Mus musculus]
Length = 305
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 25 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 83
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 84 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 119
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 167 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 225
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 226 ISAAIEP 232
>gi|27370728|gb|AAH37053.1| Sfrs11 protein, partial [Mus musculus]
Length = 313
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 25 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 83
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 84 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 119
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 167 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 225
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 226 ISAAIEP 232
>gi|27370734|gb|AAH38928.1| Sfrs11 protein, partial [Mus musculus]
gi|116283454|gb|AAH21809.1| Sfrs11 protein [Mus musculus]
Length = 310
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 25 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 83
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 84 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 119
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 167 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 225
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 226 ISAAIEP 232
>gi|76156649|gb|AAX27815.2| SJCHGC01048 protein [Schistosoma japonicum]
Length = 191
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 7/171 (4%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
K +VVQV N++P AT DQ++TLFG++G +E++ +YP D + S++CY+++ +
Sbjct: 14 KCRVVQVTNVSPSATSDQLRTLFGHVGVLEEVVVYP--SDDKEELASKVCYIRYQEPINA 71
Query: 70 GISQHLTNTVFIDRALVVTPYNSGE--IPDEQRALEIAAQQQGPNSGEPK---LPAHVTN 124
++ HL NTVF+DRAL+V P + IPDE+ A + A P+ P V +
Sbjct: 72 EVALHLNNTVFLDRALIVLPLSGDRDAIPDEKYANLVRAPPNTAAGVLPRTADWPLDVIS 131
Query: 125 QIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIE 175
+ G P QVI T +P L P YPPLP T D +IEEIRRT++ N++
Sbjct: 132 MVVGRPGEQVIHTMEPRLSSLAFPLYPPLPATTDGSRIEEIRRTILVTNLD 182
>gi|301619258|ref|XP_002939015.1| PREDICTED: splicing factor, arginine/serine-rich 11-like [Xenopus
(Silurana) tropicalis]
Length = 457
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P A+ +QM+TLFG+LGK+E+LRL+P D +PV SR+C+VKF D
Sbjct: 5 TDVIQVTNVSPSASSEQMKTLFGFLGKIEELRLFP-PDDSPLPVTSRVCFVKFQDPDSAV 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 64 VAQHLTNTVFVDRALIVVPYAEGIIPDEAKALSLVA 99
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H T + P KS+ ++ ++IEEAM
Sbjct: 139 TLAALTLPGANLNSQSLAADQLLKLMSTVDPKLNHVTAGLVSPSLKSDTSS-KDIEEAMK 197
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 198 RVREAQSLISAAIEP 212
>gi|440904132|gb|ELR54686.1| Serine/arginine-rich splicing factor 11 [Bos grunniens mutus]
Length = 482
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 125
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|296208243|ref|XP_002750997.1| PREDICTED: serine/arginine-rich splicing factor 11 [Callithrix
jacchus]
gi|403257780|ref|XP_003921472.1| PREDICTED: serine/arginine-rich splicing factor 11 [Saimiri
boliviensis boliviensis]
Length = 482
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 149
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 150 GAVPLAALGAPTLDPALAALGLP 172
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|109008420|ref|XP_001098069.1| PREDICTED: splicing factor, arginine/serine-rich 11 isoform 1
[Macaca mulatta]
gi|402854922|ref|XP_003892100.1| PREDICTED: serine/arginine-rich splicing factor 11 [Papio anubis]
gi|426329997|ref|XP_004026014.1| PREDICTED: serine/arginine-rich splicing factor 11 [Gorilla gorilla
gorilla]
Length = 482
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 149
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 150 GAVPLAALGAPTLDPALAALGLP 172
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|300244569|ref|NP_001177916.1| serine/arginine-rich splicing factor 11 isoform 2 [Homo sapiens]
gi|114557144|ref|XP_001166106.1| PREDICTED: serine/arginine-rich splicing factor 11 isoform 2 [Pan
troglodytes]
gi|397521132|ref|XP_003830657.1| PREDICTED: serine/arginine-rich splicing factor 11 [Pan paniscus]
gi|26252134|gb|AAH40436.1| Splicing factor, arginine/serine-rich 11 [Homo sapiens]
gi|119626864|gb|EAX06459.1| splicing factor, arginine/serine-rich 11, isoform CRA_b [Homo
sapiens]
Length = 483
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 150
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 151 GAVPLAALGAPTLDPALAALGLP 173
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 166 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 224
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 225 RVREAQSLISAAIEP 239
>gi|395821914|ref|XP_003784274.1| PREDICTED: serine/arginine-rich splicing factor 11 [Otolemur
garnettii]
Length = 480
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 29 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 87
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 88 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 147
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 148 GAVPLAALGAPTLDPALAALGLP 170
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 163 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 221
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 222 RVREAQSLISAAIEP 236
>gi|426215734|ref|XP_004002124.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 11 [Ovis aries]
Length = 477
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 26 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 84
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 85 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 120
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 160 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 218
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 219 RVREAQSLISAAIEP 233
>gi|291398711|ref|XP_002715972.1| PREDICTED: splicing factor, arginine/serine-rich 11 [Oryctolagus
cuniculus]
Length = 485
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 33 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 91
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 92 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 151
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 152 GAVPLAALGAPTLDPALAALGLP 174
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 167 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 225
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 226 RVREAQSLISAAIEP 240
>gi|410221876|gb|JAA08157.1| serine/arginine-rich splicing factor 11 [Pan troglodytes]
Length = 491
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 150
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 151 GAVPLAALGAPTLDPALAALGLP 173
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 166 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 224
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 225 RVREAQSLISAAIEP 239
>gi|344279010|ref|XP_003411284.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 11-like [Loxodonta africana]
Length = 479
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 149
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 150 GAVPLAALGAPTLDPALAALGLP 172
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|291410981|ref|XP_002721771.1| PREDICTED: splicing factor, arginine/serine-rich 11 [Oryctolagus
cuniculus]
Length = 485
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 33 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 91
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 92 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 151
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 152 GAVPLAALGAPTLDPALAALGLP 174
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 167 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 225
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 226 RVREAQSLISAAIEP 240
>gi|441637618|ref|XP_003260234.2| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 11 [Nomascus leucogenys]
Length = 483
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 149
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 150 GAVPLAALGAPTLDPALAALGLP 172
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|113205798|ref|NP_001038052.1| serine/arginine-rich splicing factor 11 [Sus scrofa]
gi|104295153|gb|ABF72046.1| splicing factor, arginine/serine-rich 11 [Sus scrofa]
Length = 483
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 125
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|431896989|gb|ELK06253.1| Splicing factor, arginine/serine-rich 11 [Pteropus alecto]
Length = 483
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 125
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|380817982|gb|AFE80865.1| serine/arginine-rich splicing factor 11 isoform 1 [Macaca mulatta]
gi|383422895|gb|AFH34661.1| serine/arginine-rich splicing factor 11 isoform 1 [Macaca mulatta]
gi|384950356|gb|AFI38783.1| serine/arginine-rich splicing factor 11 isoform 1 [Macaca mulatta]
Length = 483
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 149
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 150 GAVPLAALGAPTLDPALAALGLP 172
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|327282300|ref|XP_003225881.1| PREDICTED: serine/arginine-rich splicing factor 11-like [Anolis
carolinensis]
Length = 456
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P AT +QM+TLFG+LGK+E+LRL+P D +PV SR+C+VKF +
Sbjct: 7 TDVIQVTNVSPSATSEQMRTLFGFLGKIEELRLFP-PDDSPLPVSSRVCFVKFQEPDSAV 65
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T +QI
Sbjct: 66 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLSQI 125
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 126 GAVPLAALGAPTLDPALAALGLP 148
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 217 ACVIPALKLNGTNLKGKTL---------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK 267
A +P LN +L L ++ H T + P K++ ++ +EIEEAM RV+
Sbjct: 144 ALGLPTANLNSQSLAADQLLKLMSTVDPKLNHVTAGLVSPSIKTDTSS-KEIEEAMKRVR 202
Query: 268 EAQNMISAAIDP 279
EAQ++ISAAI+P
Sbjct: 203 EAQSLISAAIEP 214
>gi|4759100|ref|NP_004759.1| serine/arginine-rich splicing factor 11 isoform 1 [Homo sapiens]
gi|8134672|sp|Q05519.1|SRS11_HUMAN RecName: Full=Serine/arginine-rich splicing factor 11; AltName:
Full=Arginine-rich 54 kDa nuclear protein; Short=p54;
AltName: Full=Splicing factor, arginine/serine-rich 11
gi|178997|gb|AAA35554.1| arginine-rich nuclear protein [Homo sapiens]
gi|119626863|gb|EAX06458.1| splicing factor, arginine/serine-rich 11, isoform CRA_a [Homo
sapiens]
gi|410221874|gb|JAA08156.1| serine/arginine-rich splicing factor 11 [Pan troglodytes]
gi|410258672|gb|JAA17303.1| serine/arginine-rich splicing factor 11 [Pan troglodytes]
Length = 484
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 150
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 151 GAVPLAALGAPTLDPALAALGLP 173
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 166 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 224
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 225 RVREAQSLISAAIEP 239
>gi|115497980|ref|NP_001069089.1| serine/arginine-rich splicing factor 11 [Bos taurus]
gi|109939970|gb|AAI18155.1| Splicing factor, arginine/serine-rich 11 [Bos taurus]
gi|296489167|tpg|DAA31280.1| TPA: splicing factor, arginine/serine-rich 11 [Bos taurus]
Length = 482
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 125
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|147898671|ref|NP_001087222.1| splicing factor, arginine/serine-rich 11 isoform 1 [Mus musculus]
gi|74144820|dbj|BAE27382.1| unnamed protein product [Mus musculus]
gi|148679904|gb|EDL11851.1| splicing factor, arginine/serine-rich 11, isoform CRA_b [Mus
musculus]
gi|148679906|gb|EDL11853.1| splicing factor, arginine/serine-rich 11, isoform CRA_b [Mus
musculus]
Length = 476
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 25 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 83
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 84 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 119
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 167 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 225
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 226 ISAAIEP 232
>gi|345322694|ref|XP_001505602.2| PREDICTED: serine/arginine-rich splicing factor 11-like
[Ornithorhynchus anatinus]
Length = 496
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 45 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 103
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 104 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 139
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 221 PALKLNGTNLKGKTL---------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQN 271
P LN +L L ++ H + P KS+ ++ +EIEEAM RV+EAQ+
Sbjct: 186 PGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQS 244
Query: 272 MISAAIDP 279
+ISAAI+P
Sbjct: 245 LISAAIEP 252
>gi|307133724|ref|NP_001182518.1| splicing factor, arginine/serine-rich 11 [Pongo abelii]
Length = 483
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAI 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 149
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 150 GAVPLAALGAPTLDPALAALGLP 172
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|444516936|gb|ELV11314.1| Serine/arginine-rich splicing factor 11 [Tupaia chinensis]
Length = 452
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 125
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 236 QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
++ H + P KS+ ++ +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 165 KLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSLISAAIEP 207
>gi|148222073|ref|NP_001087221.1| splicing factor, arginine/serine-rich 11 isoform 2 [Mus musculus]
Length = 511
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 60 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 118
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 119 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 154
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 202 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 260
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 261 ISAAIEP 267
>gi|78214337|ref|NP_001030332.1| splicing factor, arginine/serine-rich 11 [Rattus norvegicus]
gi|68534380|gb|AAH99157.1| Splicing factor, arginine/serine-rich 11 [Rattus norvegicus]
gi|149026330|gb|EDL82573.1| similar to splicing factor p54, isoform CRA_b [Rattus norvegicus]
Length = 476
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 25 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 83
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 84 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 119
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 167 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 225
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 226 ISAAIEP 232
>gi|147901946|ref|NP_001089946.1| serine/arginine-rich splicing factor 11 [Xenopus laevis]
gi|83405247|gb|AAI10935.1| MGC132092 protein [Xenopus laevis]
Length = 456
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P A+ +QM TLFG+LGK+E+LRL+P D +PV SR+C+VKF D
Sbjct: 5 TDVIQVTNVSPSASSEQMITLFGFLGKIEELRLFP-PDDSPLPVTSRVCFVKFQDPDSAV 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
+SQHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 64 VSQHLTNTVFVDRALIVVPYAEGIIPDEAKALSLVA 99
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 15/72 (20%)
Query: 222 ALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK 267
AL L G NL ++L ++ H T + P KS+ ++ ++IEEAM RV+
Sbjct: 142 ALTLPGANLNTQSLAADQLLKLMSTVDPKLNHVTAGLVSPSLKSDTSS-KDIEEAMKRVR 200
Query: 268 EAQNMISAAIDP 279
EAQ++ISAAI+P
Sbjct: 201 EAQSLISAAIEP 212
>gi|41054625|ref|NP_955870.1| splicing factor, arginine/serine-rich 11 [Danio rerio]
gi|28279914|gb|AAH44186.1| Splicing factor, arginine/serine-rich 11 [Danio rerio]
Length = 461
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++P +T +QM+TLFG++G +++LRL+P D +PV SR+C+VKF + + VG
Sbjct: 6 TSVIQVTNVSPSSTAEQMRTLFGFIGSIDELRLFP-PDDSPLPVTSRVCFVKFHEPESVG 64
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
+SQHLTNTVF+DRAL+V P+ G IPDE +A+ + A
Sbjct: 65 VSQHLTNTVFVDRALIVVPFAEGVIPDESKAMSLLA 100
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 25/27 (92%)
Query: 253 EAAQREIEEAMSRVKEAQNMISAAIDP 279
+A+ +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 187 DASNKEIEEAMKRVREAQSLISAAIEP 213
>gi|149026331|gb|EDL82574.1| similar to splicing factor p54, isoform CRA_c [Rattus norvegicus]
Length = 511
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 60 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 118
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 119 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 154
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 202 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 260
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 261 ISAAIEP 267
>gi|395530451|ref|XP_003767308.1| PREDICTED: serine/arginine-rich splicing factor 11 [Sarcophilus
harrisii]
Length = 595
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 145 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 203
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 204 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 239
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 221 PALKLNGTNLKGKTL---------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQN 271
P LN +L L ++ H + P KS+ ++ +EIEEAM RV+EAQ+
Sbjct: 286 PGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQS 344
Query: 272 MISAAIDP 279
+ISAAI+P
Sbjct: 345 LISAAIEP 352
>gi|60602554|gb|AAX27734.1| unknown [Schistosoma japonicum]
Length = 187
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 9/170 (5%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+VVQV N++P AT DQ++TLFG++G +E++ +YP D + S++CY+++ + +
Sbjct: 8 RVVQVTNVSPSATSDQLRTLFGHVGVLEEVVVYP--SDDKEELASKVCYIRYQEPINAEV 65
Query: 72 SQHLTNTVFIDRALVVTPYNSGE---IPDEQRALEIAAQQQGPNSGEPK---LPAHVTNQ 125
+ HL NTVF+DRAL+V P SG+ IPDE+ A + A P+ P V +
Sbjct: 66 ALHLNNTVFLDRALIVLPL-SGDRDAIPDEKYANLVRAPPNTAAGVLPRTADWPLDVISM 124
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIE 175
+ G P QVI T +P L P YPPLP T D +IEEIRRT++ N++
Sbjct: 125 VVGRPGEQVIHTMEPRLSSLAFPLYPPLPATTDGSRIEEIRRTILVTNLD 174
>gi|351713628|gb|EHB16547.1| Splicing factor, arginine/serine-rich 11, partial [Heterocephalus
glaber]
Length = 452
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D +
Sbjct: 1 EVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAVV 59
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQIE 127
+QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 60 AQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLTQIG 119
Query: 128 GVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 120 AVPLAALGAPTLDPALAALGLP 141
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 134 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 192
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 193 RVREAQSLISAAIEP 207
>gi|170590204|ref|XP_001899862.1| splicing factor SRp54 [Brugia malayi]
gi|158592494|gb|EDP31092.1| splicing factor SRp54, putative [Brugia malayi]
Length = 220
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 28/202 (13%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQS-RICYVKFFDEKC 68
+ +V+ V+NI+ ATR+Q+ LF ++G++++ ++YP + + + YVKF D+K
Sbjct: 7 RFRVLHVSNISMTATREQIYQLFAFIGRIDEFKIYPSDNHPQLSTFTQKFAYVKFEDQKS 66
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS-GEPKLPAHVTNQIE 127
V ++QHLTNTVFIDRALV P S IPDE AL+ GP G+ +LP +V NQ++
Sbjct: 67 VEVAQHLTNTVFIDRALVCIPSISDTIPDEDTALKTG----GPAWPGQRQLPPNVVNQVK 122
Query: 128 GVPPNQVIS----------------------THDPVLVQHGLPQYPPLPITYDTKKIEEI 165
+ Q ++ T DP L GLP YP L + K+EEI
Sbjct: 123 DLGDGQQMAMSKNIACPSYDMRFADLREALLTVDPTLAALGLPPYPTLSANTEASKVEEI 182
Query: 166 RRTLVAINIEESVSPQELVDFF 187
RRT+ NI + E++ FF
Sbjct: 183 RRTVYVGNIPKDCVGDEVMKFF 204
>gi|410307840|gb|JAA32520.1| serine/arginine-rich splicing factor 11 [Pan troglodytes]
Length = 491
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 88/143 (61%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+ +QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEGIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 150
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 151 GAVPLAALGAPTLDPALAALGLP 173
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 166 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 224
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 225 RVREAQSLISAAIEP 239
>gi|355558100|gb|EHH14880.1| hypothetical protein EGK_00874 [Macaca mulatta]
Length = 483
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+ LFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRPLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLA 125
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|410307838|gb|JAA32519.1| serine/arginine-rich splicing factor 11 [Pan troglodytes]
gi|410359683|gb|JAA44647.1| serine/arginine-rich splicing factor 11 [Pan troglodytes]
Length = 484
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+ +QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEGIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 91 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLA 126
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 166 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 224
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 225 RVREAQSLISAAIEP 239
>gi|340382751|ref|XP_003389881.1| PREDICTED: hypothetical protein LOC100632051 [Amphimedon
queenslandica]
Length = 475
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 50/285 (17%)
Query: 43 LYPIARDVSIP-VQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRA 101
+ + D + P + S++C+V + + + V + HL+NTVFIDRALVV IP++ A
Sbjct: 6 FFSLPEDENKPEIPSKVCFVTYKERESVETALHLSNTVFIDRALVVAQSRFEIIPEKPVA 65
Query: 102 LEIAAQQ-------------QGPNSGEPKLPAHVTNQIEGVP---PNQV----------- 134
+ +AA G NSG P LP T+ + G P PN +
Sbjct: 66 MSLAAPAVAVAFIDKSLLIGSGVNSG-PLLPTPQTSLL-GTPQMLPNPLASAFQQAQAVA 123
Query: 135 ------ISTHDPVLVQHG--------------LPQYPPLPITYDTKKIEEIRRTLVAINI 174
I + DP LP PP+ D KI+EIRRT+ N+
Sbjct: 124 SSITANIQSQDPFSAADSPTGGSTGQSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNL 183
Query: 175 EESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKT 234
++ ++++FF G + Y+R E ++A VEF++ V AL+ NG +
Sbjct: 184 SSTLHADQVMNFFLTCGEIKYVRMAGDEMQPTRFAFVEFANPESVQVALQYNGAMFGDRP 243
Query: 235 LQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDP 279
+++ HS +I KP+ K+ + AQRE++EAM +V++A + I+ I+P
Sbjct: 244 IKVNHSKNAIVKPQGKAPDVAQREVDEAMRKVRQASHSITNVIEP 288
>gi|355745367|gb|EHH49992.1| hypothetical protein EGM_00745 [Macaca fascicularis]
Length = 483
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 88/143 (61%), Gaps = 6/143 (4%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ ++ +TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEERRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQI 126
++QHLTNTVF+DRAL+V PY G IPDE +AL + A P T QI
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGGLLPTPNPLTQI 149
Query: 127 EGVPPNQVIS-THDPVLVQHGLP 148
VP + + T DP L GLP
Sbjct: 150 GAVPLAALGAPTLDPALAALGLP 172
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 165 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 223
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 224 RVREAQSLISAAIEP 238
>gi|355721944|gb|AES07426.1| serine/arginine-rich splicing factor 11 [Mustela putorius furo]
Length = 120
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 89
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRA 101
++QHLTNTVF+DRAL+V PY G IPDE +A
Sbjct: 90 VAQHLTNTVFVDRALIVVPYAEGVIPDETKA 120
>gi|50949479|emb|CAH10414.1| hypothetical protein [Homo sapiens]
Length = 331
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|26333761|dbj|BAC30598.1| unnamed protein product [Mus musculus]
Length = 199
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 60 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 118
Query: 71 ISQHLTNTVFIDRALVVTPYNSG 93
++QHLTNTVF+DRAL+V PY G
Sbjct: 119 VAQHLTNTVFVDRALIVVPYAEG 141
>gi|26333193|dbj|BAC30314.1| unnamed protein product [Mus musculus]
Length = 318
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 41 DPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 99
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 100 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 159
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 160 KELEEVMKRVREAQSFISAAIEPESG 185
>gi|89272767|emb|CAJ83902.1| splicing factor, arginine/serine-rich 11 [Xenopus (Silurana)
tropicalis]
Length = 141
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
T V+QV N++P A+ +QM+TLFG+LGK+E+LRL+P D +PV SR+C+VKF D
Sbjct: 4 STDVIQVTNVSPSASSEQMKTLFGFLGKIEELRLFP-PDDSPLPVTSRVCFVKFQDPDSA 62
Query: 70 GISQHLTNTVFIDRALVVTPYNSG 93
++QHLTNTVF+DRAL+V PY G
Sbjct: 63 VVAQHLTNTVFVDRALIVVPYAEG 86
>gi|148686564|gb|EDL18511.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Mus
musculus]
Length = 223
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 88/143 (61%), Gaps = 3/143 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 66 DPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 124
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 125 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 184
Query: 257 REIEEAMSRVKEAQNMISAAIDP 279
+E+EE M RV+EAQ+ ISAAI+P
Sbjct: 185 KELEEVMKRVREAQSFISAAIEP 207
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 41 DPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 99
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 100 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 159
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 160 KELEEVMKRVREAQSFISAAIEPESG 185
>gi|25153312|ref|NP_741040.1| Protein RSP-7, isoform b [Caenorhabditis elegans]
gi|20338922|emb|CAD30436.1| Protein RSP-7, isoform b [Caenorhabditis elegans]
Length = 137
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
K K++ VANI+ ATRD + +F YLGK++DL++YP +++ + ++KF DE+CV
Sbjct: 8 KVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCV 67
Query: 70 GISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIE 127
++QHLTNTV ID A+V PY + IPDE+ +G+ +LP HVTN+I+
Sbjct: 68 EVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGST---TAGQRQLPPHVTNKIQ 122
>gi|74190203|dbj|BAE37215.1| unnamed protein product [Mus musculus]
Length = 155
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 60 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 118
Query: 71 ISQHLTNTVFIDRALVVTPY 90
++QHLTNTVF+DRAL+V PY
Sbjct: 119 VAQHLTNTVFVDRALIVVPY 138
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 41 DPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 99
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 100 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 159
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 160 KELEEVMKRVREAQSFISAAIEPESG 185
>gi|355734020|gb|AES11216.1| hypothetical protein [Mustela putorius furo]
Length = 106
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQR 100
++QHLTNTVFIDRAL+V P G+IP+E +
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESK 106
>gi|194390328|dbj|BAG61933.1| unnamed protein product [Homo sapiens]
Length = 131
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPY 90
++QHLTNTVF+DRAL+V PY
Sbjct: 91 VAQHLTNTVFVDRALIVVPY 110
>gi|26336164|dbj|BAC31767.1| unnamed protein product [Mus musculus]
Length = 317
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 18 DPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 76
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 77 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 136
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 137 KELEEVMKRVREAQSFISAAIEPESG 162
>gi|194377164|dbj|BAG63143.1| unnamed protein product [Homo sapiens]
Length = 128
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 32 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 90
Query: 71 ISQHLTNTVFIDRALVVTPY 90
++QHLTNTVF+DRAL+V PY
Sbjct: 91 VAQHLTNTVFVDRALIVVPY 110
>gi|301780904|ref|XP_002925870.1| PREDICTED: hypothetical protein LOC100484460, partial [Ailuropoda
melanoleuca]
Length = 407
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 98/170 (57%), Gaps = 24/170 (14%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV SR+C+VKF D
Sbjct: 184 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSSRVCFVKFHDPDSAV 242
Query: 71 ISQHLTNTVFIDRALVVTPYNS---GEIPDEQRALEIAAQQQGPNSGEPKL-PAHVTNQI 126
++QHLTNTVF+DRAL+V PY G I A+ +AA G P L PA +
Sbjct: 243 VAQHLTNTVFVDRALIVVPYAEVFHGSIKAAIGAVPLAAL------GAPTLDPALAALGL 296
Query: 127 EGVPPN----------QVISTHDPVL--VQHGLPQYPPLPITYDTKKIEE 164
G N +++ST DP L V GL P L +K+IEE
Sbjct: 297 PGANLNSQSLAADQLLKLMSTVDPKLNHVAAGL-VSPSLKSDTSSKEIEE 345
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 17/88 (19%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 290 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 348
Query: 265 RVKEAQNMISAAIDPVIGILSKDKKKSH 292
RV+EAQ++ISAAI+P G D++ H
Sbjct: 349 RVREAQSLISAAIEP--GGQEADQEGDH 374
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 56 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 114
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 115 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 174
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 175 KELEEVMKRVREAQSFISAAIEPESG 200
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINIE-ESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 41 DPNITALGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 99
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 100 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 159
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 160 KELEEVMKRVREAQSFISAAIEPESG 185
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINIE-ESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|148686563|gb|EDL18510.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Mus
musculus]
Length = 519
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 66 DPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 124
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 125 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 184
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 185 KELEEVMKRVREAQSFISAAIEPESG 210
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINIE-ESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 41 DPNITALGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 99
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 100 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 159
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 160 KELEEVMKRVREAQSFISAAIEPESG 185
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINIE-ESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINIE-ESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|27369842|ref|NP_766180.1| splicing regulatory glutamine/lysine-rich protein 1 [Mus musculus]
gi|37537951|sp|Q8BZX4.1|SREK1_MOUSE RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|26329009|dbj|BAC28243.1| unnamed protein product [Mus musculus]
gi|47682645|gb|AAH70460.1| Splicing factor, arginine/serine-rich 12 [Mus musculus]
Length = 494
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 41 DPNITTLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 99
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 100 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 159
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 160 KELEEVMKRVREAQSFISAAIEPESG 185
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|229366332|gb|ACQ58146.1| Splicing factor arginine/serine-rich 11 [Anoplopoma fimbria]
Length = 108
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
TKVVQV N++P T +QM+TLFG+LG +E+L+L+P D +PV SR+C VKF + + VG
Sbjct: 5 TKVVQVTNVSPSTTSEQMRTLFGFLGTIEELKLFP-PDDSQMPVTSRVCSVKFQEPESVG 63
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGP 111
+SQHLTNTVF+D AL+V P+ E+ + A + A + GP
Sbjct: 64 VSQHLTNTVFVDGALIVVPF--AEVKKAKAAPSLMA-ESGP 101
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNIATLGEIPQ-PPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIG 282
+E+EE M RV+EAQ+ ISAAI+P G
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESG 182
>gi|313242168|emb|CBY34338.1| unnamed protein product [Oikopleura dioica]
Length = 457
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 131/250 (52%), Gaps = 28/250 (11%)
Query: 7 APVKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSI-PVQSRICYVKFFD 65
+P T VV+VAN+A D ++ +FGY+G++E ++YP R+VS+ PV S++ +VK+
Sbjct: 3 SPNDTYVVKVANLAITTKEDDIRHMFGYIGRMEHCQMYP--RNVSLMPVPSKVAFVKYKH 60
Query: 66 EKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQ 125
++ ++ HLTN++ +D+ + V P+ + E+P E AL QQ P G + + +N+
Sbjct: 61 KRDAAVALHLTNSILVDKCIQVIPWRNDEMPSEAVAL----QQLFPGKGYGQ---NASNK 113
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQE-LV 184
T + +L G P +P + D + E+I+RT+ ++ S + E L+
Sbjct: 114 ----------PTLEILLKNEGFEAAPTIPPSVDIEIREQIQRTIHIRGLDPSNTTNESLL 163
Query: 185 DFFQKVGTVNYIRFCTRENDTNKY----ALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
FF+K G V Y CT + + VEFS+ + +I ALKL + GK + S
Sbjct: 164 VFFEKCGEVKY---CTLAGEGDFAEECDGYVEFSEISSIINALKLEDKTIDGKQFTVEMS 220
Query: 241 TQSIQKPEAK 250
+I K K
Sbjct: 221 RCAILKSAVK 230
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 92/152 (60%), Gaps = 3/152 (1%)
Query: 139 DPVLVQHG-LPQYPPLPITYDTKKIEEIRRTLVAINIE-ESVSPQELVDFFQKVGTVNYI 196
DP + G +PQ PP+ D KI+EIRRT+ N+ ++ + +L++FF++VG V ++
Sbjct: 38 DPNITALGEIPQ-PPIMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFV 96
Query: 197 RFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
R E ++A VEF+DQ V AL NG + L++ HS +I KP + +AA
Sbjct: 97 RMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAA 156
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIGILSKDK 288
+E+EE M RV+EAQ+ ISAAI+P G S+ K
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESGKSSERK 188
>gi|313235469|emb|CBY19747.1| unnamed protein product [Oikopleura dioica]
Length = 422
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 131/250 (52%), Gaps = 28/250 (11%)
Query: 7 APVKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSI-PVQSRICYVKFFD 65
+P T VV++AN+A D ++ +FGY+G++E ++YP R+VS+ PV S++ +VK+
Sbjct: 3 SPNDTYVVKIANLAITTKEDDIRHMFGYIGRMEHCQMYP--RNVSLMPVPSKVAFVKYKH 60
Query: 66 EKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQ 125
++ ++ HLTN++ +D+ + V P+ + E+P E +A QQ P G + +N+
Sbjct: 61 KRDAAVALHLTNSILVDKCIQVIPWRNDEMPSEA----VALQQLFPGKG---YGQNASNK 113
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQE-LV 184
T + +L G P +P + D + E+I+RT+ ++ S + E L+
Sbjct: 114 ----------PTLEILLKNEGFEAAPTIPPSVDIEIREQIQRTIHIRGLDPSNTTNESLL 163
Query: 185 DFFQKVGTVNYIRFCT--RENDTNKY--ALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
FF+K G V Y CT E D + VEFS+ + +I ALKL + GK + S
Sbjct: 164 VFFEKCGEVKY---CTLAGEGDFAEECDGYVEFSEISSIINALKLEDKTIDGKQFTVEMS 220
Query: 241 TQSIQKPEAK 250
+I K K
Sbjct: 221 RCAILKSAVK 230
>gi|340383093|ref|XP_003390052.1| PREDICTED: hypothetical protein LOC100637518 [Amphimedon
queenslandica]
Length = 428
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%)
Query: 147 LPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN 206
LP PP+ D KI+EIRRT+ N+ ++ ++++FFQ G + Y+R E
Sbjct: 91 LPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPT 150
Query: 207 KYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
++A VEF++ V AL+ NG + +++ HS +I KP+ K+ + AQRE++EAM +V
Sbjct: 151 RFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNAIVKPQGKAPDVAQREVDEAMRKV 210
Query: 267 KEAQNMISAAIDP 279
++A + I+ I+P
Sbjct: 211 RQASHSITNVIEP 223
>gi|340385705|ref|XP_003391349.1| PREDICTED: hypothetical protein LOC100639209, partial [Amphimedon
queenslandica]
Length = 358
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 80/133 (60%)
Query: 147 LPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN 206
LP PP+ D KI+EIRRT+ N+ ++ ++++FFQ G + Y+R E
Sbjct: 23 LPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPT 82
Query: 207 KYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
++A VEF++ V AL+ NG + +++ HS +I KP+ K+ + AQRE++EAM +V
Sbjct: 83 RFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNAIVKPQGKAPDVAQREVDEAMRKV 142
Query: 267 KEAQNMISAAIDP 279
++A + I+ I+P
Sbjct: 143 RQASHSITNVIEP 155
>gi|197100414|ref|NP_001125610.1| splicing regulatory glutamine/lysine-rich protein 1 [Pongo
abelii]
gi|395455053|ref|NP_001257422.1| splicing regulatory glutamine/lysine-rich protein 1 isoform d
[Homo sapiens]
gi|410039316|ref|XP_003950595.1| PREDICTED: serine/arginine-rich splicing factor 11-like [Pan
troglodytes]
gi|426384536|ref|XP_004058818.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 5 [Gorilla gorilla gorilla]
gi|441658631|ref|XP_004091275.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
gi|55728627|emb|CAH91054.1| hypothetical protein [Pongo abelii]
Length = 100
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTP 89
++QHLTNTVFIDRAL+V P
Sbjct: 77 VAQHLTNTVFIDRALIVVP 95
>gi|313220329|emb|CBY31185.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 34/253 (13%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
+T +V V N+ +AT +QM LF ++G + ++ L+P DVS+ VQ ++C+VKF + V
Sbjct: 103 ETNIVMVNNVTTKATEEQMSVLFSFIGPITEIALFP-KYDVSL-VQHKVCFVKFVSKADV 160
Query: 70 GISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGV 129
++ HL+N VFIDRAL V +N + PDE A+ P+ N +G+
Sbjct: 161 VVALHLSNNVFIDRALQVKEWND-DWPDESEAIIYCT---------PQDVVKNMNLGDGL 210
Query: 130 PPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQK 189
T L P L T + + +E RR + N+ E V+ +++ +F+
Sbjct: 211 DATSTALT---------LFNNPRLMTTVNAQSADEFRRQVCVGNVHEIVTDEQVKQYFES 261
Query: 190 V-GTVNYIRF----CTRENDTNK--------YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
G V+ + F R+ + +K Y V F+D + V AL+L+G G +
Sbjct: 262 YSGNVDRVEFHELRKGRKTEMDKDDVGHQVRYCTVIFADASSVGAALQLDGNMFAGIPIS 321
Query: 237 MFHSTQSIQKPEA 249
+ H+ S K +A
Sbjct: 322 IKHTKYSDIKHDA 334
>gi|119571713|gb|EAW51328.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Homo
sapiens]
Length = 108
Score = 94.7 bits (234), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF +LG++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYP-PDNAPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTPYNSG 93
++QHLTNTVFIDRAL+V P G
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEG 99
>gi|313230545|emb|CBY18761.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 34/253 (13%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
+T +V V N+ +AT +QM LF ++G + ++ L+P DVS+ VQ ++C+VKF + V
Sbjct: 103 ETNIVMVNNVTTKATEEQMSVLFSFIGPITEIALFP-KYDVSL-VQHKVCFVKFESKADV 160
Query: 70 GISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGV 129
++ HL+N VFIDRAL V +N + PDE A+ P+ N +G+
Sbjct: 161 VVALHLSNNVFIDRALQVKEWND-DWPDESEAIIYCT---------PQDVVKNMNLGDGL 210
Query: 130 PPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQK 189
T L P L T + + +E RR + N+ E V+ +++ +F+
Sbjct: 211 DATSTALT---------LFNNPRLMTTVNAQSADEFRRQVCVGNVHEIVTDEQVKQYFES 261
Query: 190 V-GTVNYIRF----CTRENDTNK--------YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
G V+ + F R+ + +K Y V F+D + V AL+L+G G +
Sbjct: 262 YSGKVDRVEFHELRKGRKTEMDKDDVGHQVRYCTVIFADASSVGAALQLDGNMFAGIPIS 321
Query: 237 MFHSTQSIQKPEA 249
+ H+ S K +A
Sbjct: 322 IKHTKYSDIKHDA 334
>gi|410948715|ref|XP_003981076.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Felis catus]
Length = 132
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V+QV N++ T +QM+TLF ++G++E+LRLYP + + S++CYVKF D VG
Sbjct: 18 TAVIQVTNLSSAVTSEQMRTLFSFVGEIEELRLYP-PDNTPLAFSSKVCYVKFRDPSSVG 76
Query: 71 ISQHLTNTVFIDRALVVTP 89
++QHLTNTVFIDRAL+V P
Sbjct: 77 VAQHLTNTVFIDRALIVVP 95
>gi|324530301|gb|ADY49085.1| Splicing factor, arginine/serine-rich 7 [Ascaris suum]
Length = 169
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 6/126 (4%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQS-RICYVKFFDEKC 68
+ +V+ V+NI+ AT++Q+ LF ++G++++ ++YP + + + YVKF + K
Sbjct: 7 RFRVLHVSNISMSATKEQIYQLFAFIGRIDEFKMYPTDNHPQLSTFTQKFAYVKFEESKS 66
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS-GEPKLPAHVTNQIE 127
V ++QHLTNTVFIDRALV P S +PDE+ AL+ GP G+ +LP +V NQI+
Sbjct: 67 VEVAQHLTNTVFIDRALVCIPSISDAVPDEETALKTG----GPAWPGQRQLPPNVVNQIQ 122
Query: 128 GVPPNQ 133
+ Q
Sbjct: 123 DLGDGQ 128
>gi|320163007|gb|EFW39906.1| hypothetical protein CAOG_00431 [Capsaspora owczarzaki ATCC 30864]
Length = 611
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 104/246 (42%), Gaps = 43/246 (17%)
Query: 8 PVKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIP-----VQSRICYVK 62
P VVQV NI+P AT Q+Q LF +G + R VS P +R C V+
Sbjct: 51 PAVACVVQVLNISPTATEAQLQQLFANIGPISRFR-----GGVSDPSLVGGAAARSCLVR 105
Query: 63 FFDEKCVGISQHLTNTVFIDRALVVTPYNSG---------EIPDEQRAL----------- 102
+++ ++ L NT+ +DRAL+VTP ++ +P RAL
Sbjct: 106 YYNVDDARVACLLNNTMLLDRALLVTPASAAIAQPVLVEPLMPGPPRALLPGIAPASGLL 165
Query: 103 ---------EIAAQQQGPNSGEPKLPAHVTN---QIEGVPPNQVISTHDP-VLVQHGLPQ 149
A P + A N GV P + H +L LP
Sbjct: 166 PAPLPGAPPLTTAGGAAPRQPSASMTAANGNNAPSATGVIPAYLSPQHKASLLTGTNLPI 225
Query: 150 YPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYA 209
PPLP D K+EE+RRT+ NI + +++ FF G ++YI+ T E ++A
Sbjct: 226 LPPLPAGLDAVKMEEMRRTMHVGNIANHATEEDIRYFFSNFGEISYIKLVTIEGQPARFA 285
Query: 210 LVEFSD 215
+EF +
Sbjct: 286 FIEFKE 291
>gi|196010447|ref|XP_002115088.1| hypothetical protein TRIADDRAFT_17518 [Trichoplax adhaerens]
gi|190582471|gb|EDV22544.1| hypothetical protein TRIADDRAFT_17518, partial [Trichoplax
adhaerens]
Length = 82
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T V QV N++P AT +Q+ TLFG+LG++E+L+L+P + + V S++C+VK+ D V
Sbjct: 1 THVCQVTNVSPGATVEQLNTLFGFLGEIEELKLFP-SETQAAAVTSKVCFVKYKDCHSVQ 59
Query: 71 ISQHLTNTVFIDRALVVTPYNSG 93
+++HL+N+VFIDRAL+V P + G
Sbjct: 60 VARHLSNSVFIDRALIVIPASDG 82
>gi|149016025|gb|EDL75306.1| rCG64103 [Rattus norvegicus]
Length = 269
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Query: 139 DPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIR 197
DP + +PQ PPL D + +EIRRT+ N+ +++S ++++FF++VG V +
Sbjct: 42 DPNITLGEIPQ-PPLTGNVDPSRTDEIRRTIHVGNLNSQTMSADQILEFFKQVGEVKFFP 100
Query: 198 FCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQR 257
E ++A VEF+DQ V AL NG + L++ HS +I KP + +A +
Sbjct: 101 MADDETQPTQFAFVEFADQNSVPRALAFNGVTFGDRGLKINHSQNAIVKPPEMAPQAVVK 160
Query: 258 EIEEAMSRVKEAQ 270
E+EE M RV+E +
Sbjct: 161 ELEETMKRVREGR 173
>gi|148679905|gb|EDL11852.1| splicing factor, arginine/serine-rich 11, isoform CRA_c [Mus
musculus]
Length = 485
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 20/96 (20%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVG 70
T+V+QV N++P A+ +Q+ D +PV SR+C+VKF D
Sbjct: 53 TEVIQVTNVSPSASSEQI--------------------DSPLPVSSRVCFVKFHDPDSAV 92
Query: 71 ISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 93 VAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 128
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 176 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 234
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 235 ISAAIEP 241
>gi|340377495|ref|XP_003387265.1| PREDICTED: serine/arginine-rich splicing factor 11-like [Amphimedon
queenslandica]
Length = 144
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Query: 14 VQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIP-VQSRICYVKFFDEKCVGIS 72
+QV NI P+AT QM+ LF YLG +++LRL+P D + P + S++C+V + + + V +
Sbjct: 6 IQVTNICPKATVRQMKELFSYLGDIDELRLFP--EDENKPEIPSKVCFVTYKERESVETA 63
Query: 73 QHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQ-------------QGPNSGEPKLP 119
HL+NTVFIDRALVV IP+E A+ +AA G NSG P LP
Sbjct: 64 LHLSNTVFIDRALVVAQSRFEIIPEEPVAMSLAAPAVAVAFIDKSLLIGSGVNSG-PLLP 122
Query: 120 AHVTNQIEGVP 130
T+ + G P
Sbjct: 123 TPQTSLL-GTP 132
>gi|449268296|gb|EMC79166.1| Splicing factor, arginine/serine-rich 11, partial [Columba livia]
Length = 305
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 49 DVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
D +PV SR+C+VKF D ++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 1 DSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 58
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 221 PALKLNGTNLKGKTL---------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQN 271
P LN +L L ++ H + P KS+ ++ +EIEEAM RV+EAQ+
Sbjct: 105 PGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQS 163
Query: 272 MISAAIDP 279
+ISAAI+P
Sbjct: 164 LISAAIEP 171
>gi|410967551|ref|XP_003990282.1| PREDICTED: serine/arginine-rich splicing factor 11 [Felis catus]
Length = 538
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 33 GYLGKVEDLRLYPIA-RDVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYN 91
G LG E P D +PV SR+C+VKF D ++QHLTNTVF+DRAL+V PY
Sbjct: 108 GLLGLREAGSTLPTTYSDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYA 167
Query: 92 SGEIPDEQRALEIAAQQQGPNSGEPKLPAHVT----NQIEGVPPNQVIS-THDPVLVQHG 146
G IPDE +AL + A P T QI VP + + T DP L G
Sbjct: 168 EGVIPDETKALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALG 227
Query: 147 LP 148
LP
Sbjct: 228 LP 229
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 222 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 280
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 281 RVREAQSLISAAIEP 295
>gi|449509041|ref|XP_004174961.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 11 [Taeniopygia guttata]
Length = 395
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 49 DVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
D +PV SR+C+VKF D ++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 10 DSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 67
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 221 PALKLNGTNLKGKTL---------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQN 271
P LN +L L ++ H + P KS+ ++ +EIEEAM RV+EAQ+
Sbjct: 114 PGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQS 172
Query: 272 MISAAIDP 279
+ISAAI+P
Sbjct: 173 LISAAIEP 180
>gi|326925540|ref|XP_003208971.1| PREDICTED: serine/arginine-rich splicing factor 11-like [Meleagris
gallopavo]
Length = 446
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 49 DVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
D +PV SR+C+VKF D ++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 32 DSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 89
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 221 PALKLNGTNLKGKTL---------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQN 271
P LN +L L ++ H + P KS+ ++ +EIEEAM RV+EAQ+
Sbjct: 136 PGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQS 194
Query: 272 MISAAIDP 279
+ISAAI+P
Sbjct: 195 LISAAIEP 202
>gi|194211218|ref|XP_001498313.2| PREDICTED: serine/arginine-rich splicing factor 11 [Equus caballus]
Length = 418
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 49 DVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
D +PV SR+C+VKF D ++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 3 DSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 60
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 100 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 158
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 159 RVREAQSLISAAIEP 173
>gi|344250477|gb|EGW06581.1| Splicing factor, arginine/serine-rich 11 [Cricetulus griseus]
Length = 389
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 49 DVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
D +PV SR+C+VKF D ++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 5 DSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 62
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 110 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 168
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 169 ISAAIEP 175
>gi|345802226|ref|XP_547337.3| PREDICTED: serine/arginine-rich splicing factor 11 isoform 1 [Canis
lupus familiaris]
Length = 501
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 49 DVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAA 106
D +PV SR+C+VKF D ++QHLTNTVF+DRAL+V PY G IPDE +AL + A
Sbjct: 87 DSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDETKALSLLA 144
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ + +EIEEAM
Sbjct: 184 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSD-TSSKEIEEAMK 242
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 243 RVREAQSLISAAIEP 257
>gi|449691485|ref|XP_002170081.2| PREDICTED: uncharacterized protein LOC100212876, partial [Hydra
magnipapillata]
Length = 312
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T D +I+EIRRT+ NI ++ +L+ FF VG V Y+R C + D+ KYA VEF+
Sbjct: 14 TTDPVEIDEIRRTVFVQNIPPDITADQLMAFFSGVGEVKYLRLC--KGDSGKYAFVEFTA 71
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAK 250
V AL+ NG G+ L++ +S I KPE++
Sbjct: 72 IDSVPTALQYNGVLFGGRCLKVDYSKHPIIKPESE 106
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 18 NIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGISQHLTN 77
N++ Q T + + F ++G + + L P + + VQ + V+F D + ++ HLT
Sbjct: 22 NLSKQITEELLCQFFSFIGPIVSISLQPC--EANPLVQESL--VQFQDSEDAALALHLTG 77
Query: 78 TVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNS-GEPKLPAHVTNQIEGVPPNQVIS 136
TV D+AL +TP +A+ Q NS G +P PPN
Sbjct: 78 TVLADKALFITP--------------PSAKIQSFNSHGYLNIP----------PPNP--- 110
Query: 137 THDPVLVQHGLPQYPPLPI--TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVN 194
T VLV + +P T + + RT+ NI +S QE+ F G V
Sbjct: 111 TAPGVLVPGSMAGSTIVPYGQTATIAGQDSVDRTIYTGNIHSGLSQQEVSMLFSSCGDVT 170
Query: 195 YIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKP 247
++ + +YA +EF+ AL L+G + G+ +++ S SI +P
Sbjct: 171 QVKMAGDATHSTRYAFIEFATSESAAMALNLHGMMVAGRAIKVNRSKHSIGRP 223
>gi|303280195|ref|XP_003059390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459226|gb|EEH56522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 589
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
++ RT+ A N+ S++ L DFF G V Y++F + + +++ VEF+D+A A
Sbjct: 293 DVARTVYAGNVNSSITEDMLADFFSVAGVVTYVKFAGSDFNPSRFGFVEFTDKASAEAAK 352
Query: 224 KLNGTNLKGKTLQMFHSTQSIQKPEAKS 251
L+GT L TL++ HS I K + K+
Sbjct: 353 ALSGTMLAEMTLKVKHSNNPIIKDKLKN 380
>gi|170060389|ref|XP_001865781.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878845|gb|EDS42228.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 155
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 38/137 (27%)
Query: 30 TLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTP 89
+LFG+ GK RLY + V SRIC+ +T I+ +V
Sbjct: 56 SLFGHSGK---FRLYSTMQGVCCSRMSRICH-----------EVEMT----INWTMVPGL 97
Query: 90 YNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVPPNQVISTHDPVLVQHGLPQ 149
+N+G GP PK V N+I GV PNQ++ T D LV++ LP
Sbjct: 98 HNNG----------------GPYRLHPK----VVNRIVGVVPNQIVKTIDLKLVKYNLPG 137
Query: 150 YPPLPITYDTKKIEEIR 166
YPPLP+ D+KKIE ++
Sbjct: 138 YPPLPVNLDSKKIECLK 154
>gi|440795967|gb|ELR17076.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 347
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
+K +EI RT+ N+ +++ ++L+ FF G + + R E+ +++A +EF+ +
Sbjct: 169 EKQDEIARTIYVGNVNSTITSEQLMQFFAICGPITFCRLAGDESHPSRFAFIEFATKEAA 228
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
A+ LNGT L + +++ HS I KP + A +I +A+ R
Sbjct: 229 QAAMMLNGTMLLDRAVKVNHSKNPIVKPPKTVDNAKDEQILDAVKRA 275
>gi|449690822|ref|XP_004212471.1| PREDICTED: uncharacterized protein LOC100213312, partial [Hydra
magnipapillata]
Length = 186
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 44 YPIARDVSIPVQSRICYVKFFDEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALE 103
+ + D+ + V ++CY+++ + + GI+QHLTNTVFID+AL+V P N E+P+E +
Sbjct: 104 FDFSDDIKVAV--KLCYIQYDNSEQCGIAQHLTNTVFIDKALIVVPINRTEVPEENECVS 161
Query: 104 I 104
+
Sbjct: 162 L 162
>gi|255074269|ref|XP_002500809.1| predicted protein [Micromonas sp. RCC299]
gi|226516072|gb|ACO62067.1| predicted protein [Micromonas sp. RCC299]
Length = 456
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
++ RT+ A N+ S++ L DFF G V Y++F E + +++ VEF +A A
Sbjct: 237 DVSRTVYAGNVNSSITEDMLADFFSIAGNVTYVKFAGSEFNPSRFGFVEFDTKAAAESAK 296
Query: 224 KLNGTNLKGKTLQMFHSTQSIQK 246
L GT + T+++ HS I K
Sbjct: 297 ALTGTQVAEMTIKVKHSNNPIVK 319
>gi|111305175|gb|AAI20238.1| SFRS11 protein [Bos taurus]
Length = 67
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 32/35 (91%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYP 45
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P
Sbjct: 31 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP 65
>gi|53734664|gb|AAH83359.1| Sfrs11 protein, partial [Mus musculus]
Length = 102
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSR 57
T+V+QV N++P A+ +QM+TLFG+LGK+++LRL+P D +PV R
Sbjct: 33 TEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFP-PDDSPLPVSER 78
>gi|324502775|gb|ADY41218.1| Splicing factor, arginine/serine-rich 7 [Ascaris suum]
Length = 387
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 186 FFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
F +G V Y+R EN YA VEF++Q V A++ NG +G+ L++ HS +I
Sbjct: 4 FNNNIGEVMYLRMAAGNENLPCAYAYVEFTNQPTVPIAVQNNGIEFQGRCLRIQHSRVAI 63
Query: 245 QKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSHSPV 295
KPE K+ + A +E+EEA+ RV + S+A++ + L D +++SP+
Sbjct: 64 IKPERKTTDMALQEVEEAI-RVNQNPEKSSSALNKLNQGLGID--RAYSPI 111
>gi|324512008|gb|ADY44985.1| Splicing factor, arginine/serine-rich 7 [Ascaris suum]
gi|324518433|gb|ADY47102.1| Splicing factor, arginine/serine-rich 7, partial [Ascaris suum]
Length = 387
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 186 FFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
F +G V Y+R EN YA VEF++Q V A++ NG +G+ L++ HS +I
Sbjct: 4 FNNNIGEVMYLRMAAGNENLPCAYAYVEFTNQPTVPIAVQNNGIEFQGRCLRIQHSRVAI 63
Query: 245 QKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSHSPV 295
KPE K+ + A +E+EEA+ RV + S+A++ + L D +++SP+
Sbjct: 64 IKPERKTTDMALQEVEEAI-RVNQNPEKSSSALNKLNQGLGID--RAYSPI 111
>gi|112418464|gb|AAI21836.1| MGC144989 protein [Xenopus (Silurana) tropicalis]
Length = 41
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 31/35 (88%)
Query: 11 TKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYP 45
T V+QV N++P A+ +QM+TLFG+LGK+E+LRL+P
Sbjct: 5 TDVIQVTNVSPSASSEQMKTLFGFLGKIEELRLFP 39
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 160 KKIEEIRR---TLVAINIEESVSPQELVDFFQK-VGTVNYIRFC--TRENDTNKYALVEF 213
+ IEE +R T++ N+ SV +++ + F + G V I+ +R + A VEF
Sbjct: 315 RDIEEAQRDDLTVLVFNMSLSVDERDIYELFSEHAGKVRDIQLVRDSRSGRSKGIAYVEF 374
Query: 214 SDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMI 273
Q VI AL +NG +LKG+ ++ +Q +A+ N AA+ + + +KEA N
Sbjct: 375 YTQESVIKALSMNGMSLKGQGIR-------VQSSQAEKNRAARAAKQLQENALKEADNPT 427
Query: 274 SAAIDPVIGILSK----DKKKSHSPVRHLVIVLIVVDVALDLALEIG 316
+ + ++G+LS D ++ +P ++ V + + DL L G
Sbjct: 428 TVMVSNLVGVLSNLSEGDLQQLFAPFGNVAEVAVARN---DLGLSKG 471
>gi|17543644|ref|NP_500025.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
gi|373220572|emb|CCD74059.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
Length = 580
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 140 PVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC 199
P +H P+ L +T + E +RTL+ + I P++L +FF VG V +R
Sbjct: 147 PFNPRHSPPKNAKLELTAE----ERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRII 202
Query: 200 T--RENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQR 257
T R + VEF D+ V L LNG L G LQ IQ+ A+ N AA
Sbjct: 203 TDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQ-------IQRTCAERNRAANS 255
Query: 258 EIEEAMSRV 266
+ + V
Sbjct: 256 SVASTLGFV 264
>gi|25148310|ref|NP_741301.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
gi|373220574|emb|CCD74061.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
Length = 435
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 140 PVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC 199
P +H P+ L +T + E +RTL+ + I P++L +FF VG V +R
Sbjct: 2 PFNPRHSPPKNAKLELTAE----ERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRII 57
Query: 200 T--RENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQR 257
T R + VEF D+ V L LNG L G LQ IQ+ A+ N AA
Sbjct: 58 TDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQ-------IQRTCAERNRAANS 110
Query: 258 EIEEAMSRV 266
+ + V
Sbjct: 111 SVASTLGFV 119
>gi|167518059|ref|XP_001743370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778469|gb|EDQ92084.1| predicted protein [Monosiga brevicollis MX1]
Length = 400
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 117/294 (39%), Gaps = 34/294 (11%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGIS 72
VV N+ P + M L +G V+++ L SR YV+F ++ V ++
Sbjct: 3 VVVFGNLPPNVQQKHMAGLITTVGDVKEMMLIDAG-------ASRKLYVRFARQEDVDVA 55
Query: 73 QHLTNTVFIDRALVVTPYNSGEIPDEQRA-------LEIAAQQQGPNSGEPKLPAHVTNQ 125
Q L F+ R L V + ++P E++ L +A+ P+ PA +
Sbjct: 56 QCLHECFFLGRLLAVEAAD--DMPAEEKRVNFYIPPLPVASNVMPPH------PAMMAAS 107
Query: 126 IEGVPPNQVISTHDPVLVQHGLPQYPPLPIT----------YDTKKIEEIRRTLVAINIE 175
+ +P + + + PP T +T K++E+RRTL N+
Sbjct: 108 MLPMPGPAQLGPMPNPFNNNPVASLPPPQATDTNFALAANVVETGKMDEMRRTLYVGNLA 167
Query: 176 ESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTL 235
+++V GT+ R + ++ VEF+ V L LN + L + +
Sbjct: 168 LHTKQEDVVKVMATCGTIKQARIVMDPSRQARFCFVEFAHIEDVATGLTLNNSLLHDRFV 227
Query: 236 QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKK 289
+ ++ +I K ++ A R +A+ R + + I A ++ G D K
Sbjct: 228 TVNYAKHNIVK--TRNAGARDRLAAQALKRASDVEARILARMNKGSGADEGDGK 279
>gi|341877935|gb|EGT33870.1| hypothetical protein CAEBREN_20987 [Caenorhabditis brenneri]
Length = 528
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP + E +RTL+ + I P++L +FF VG V +R T R +
Sbjct: 104 PPKNAKLELSAEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGI 163
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
VEF D+ V L LNG L G LQ IQ+ A+ N AA + + V
Sbjct: 164 CYVEFWDEESVPLGLALNGQRLMGAPLQ-------IQRTCAERNRAANSSMASTLGFV 214
>gi|308473560|ref|XP_003099004.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
gi|308267807|gb|EFP11760.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
Length = 651
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP + E +RTL+ + I P++L +FF VG V +R T R +
Sbjct: 225 PPKNAKLELSPEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGI 284
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
VEF D+ V L LNG L G LQ IQ+ A+ N AA + + V
Sbjct: 285 CYVEFWDEESVPLGLALNGQRLMGAPLQ-------IQRTCAERNRAANSSMASTLGFV 335
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKY 208
PP P+T ++ + E+ +RT+ + + ++ P++L +FF KVG V+ +R + N +
Sbjct: 104 PPEPMTEESAE-EKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGI 162
Query: 209 ALVEFSDQACVIPALKLNGTNLKG 232
A +EF+D++ V A+ L+G L G
Sbjct: 163 AYIEFTDKSAVPLAIGLSGQKLLG 186
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 166 RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNKYALVEFSDQACVIPALK 224
RRT N++ S+ + F K G + IR T + + YA VEF D+ V+ ALK
Sbjct: 771 RRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVKTIKGKSKGYAYVEFKDELGVLEALK 830
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK-EAQNM-ISAAIDPVIG 282
L+ T ++G+ MF + K E +S + AQ + AM + K +N+ + + D +I
Sbjct: 831 LDRTPIEGRP--MF-----VSKCEDRSQKKAQFKFSTAMEKNKLFIKNLPFTCSKDALIQ 883
Query: 283 ILSKDKKKSHSPVRHLVIV 301
I S+ H PV+ + +V
Sbjct: 884 IFSE-----HGPVKEVRMV 897
>gi|397613506|gb|EJK62257.1| hypothetical protein THAOC_17140 [Thalassiosira oceanica]
Length = 151
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R L N+ ++P+EL D F K G V IR R DT A V + D A+
Sbjct: 38 EVNRILYVRNLPFKITPEELYDIFGKYGAVFQIRLGERGKDTKGTAFVVYEDIYDAKRAV 97
Query: 224 K-LNGTNLKGKTL--QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISA 275
L+G N+ G+ L Q + + +K +A E+A++E+EE VK + + A
Sbjct: 98 DHLSGFNVGGRYLVVQYYQPAKFQKKADA---ESAKKELEELRRAVKAKKAALQA 149
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP + E +RTL+ + I P++L +FF VG V +R T R +
Sbjct: 151 PPKNAKLELSAEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKGI 210
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
VEF D+ V L LNG L G LQ IQ+ A+ N A + + V
Sbjct: 211 CYVEFWDEESVPLGLALNGQRLMGAPLQ-------IQRTCAERNRIANSSVASTLGFV 261
>gi|326514092|dbj|BAJ92196.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532980|dbj|BAJ89335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQAC 218
T + + +RRT+ +I++ V+ Q+L + F G V R C N ++A +EF+D
Sbjct: 158 TDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVG 217
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSI 244
AL L GT L +++ S +I
Sbjct: 218 ARAALALGGTVLGFYPVRVLPSKTAI 243
>gi|154309565|ref|XP_001554116.1| hypothetical protein BC1G_07253 [Botryotinia fuckeliana B05.10]
gi|347838315|emb|CCD52887.1| similar to pre-mRNA branch site protein p14 [Botryotinia
fuckeliana]
Length = 121
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R L N+ +V+P+EL D F K G + IR N T A V + D A
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKFGAIRQIRQGIATN-TKGTAFVVYEDVTDSKTAC 68
Query: 224 -KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEA-MSRVKEAQNM 272
KLNG N + + L ++H + ++K A SN++ +A + ++K A N+
Sbjct: 69 DKLNGFNFQNRYLVVLYHQPEKMEKMRANSNQSDSYAARKASLEQLKTANNI 120
>gi|357464159|ref|XP_003602361.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355491409|gb|AES72612.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 384
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+ E IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D+
Sbjct: 192 KREEMIRRTVYVSDIDQQVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFVEFTDEVGA 251
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L L++ S +I
Sbjct: 252 RAALNLSGTMLGYYPLRVLPSKTAI 276
>gi|159464635|ref|XP_001690547.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158280047|gb|EDP05806.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 464
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 160 KKIEE-IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQAC 218
K +EE IRRT+ ++ S++ + L FF G + R C N ++A +EF D C
Sbjct: 187 KGLEENIRRTVYISYVDCSLTEENLAAFFSDCGRILDCRICGDPNSAMRFAFIEFMDVEC 246
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSI 244
AL+ G+ L L++ S +I
Sbjct: 247 AAKALEKTGSVLGNSPLRVLPSKTAI 272
>gi|402594289|gb|EJW88215.1| hypothetical protein WUBG_00874 [Wuchereria bancrofti]
Length = 359
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 195 YIRFCT-RENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNE 253
Y+R + EN YA +EF++Q V AL+ NG KG+ L++ HS +I KPE K+ +
Sbjct: 2 YLRMTSGTENLPCAYAYIEFTNQPTVPIALQNNGIEFKGRCLRIQHSRVAIIKPERKTAD 61
Query: 254 AAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSHSPV 295
A +E+EEA+ RV + + + A+ + L D +S+SP+
Sbjct: 62 MALQEVEEAI-RVNQNPDKAANALSKLNQGLGMD--RSYSPL 100
>gi|222635710|gb|EEE65842.1| hypothetical protein OsJ_21610 [Oryza sativa Japonica Group]
Length = 367
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQAC 218
T + + +RRT+ +I++ V+ Q+L + F G V R C N ++A +EF+D
Sbjct: 169 TDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVG 228
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSI 244
AL L GT L +++ S +I
Sbjct: 229 ARAALTLGGTVLGYYPVRVLPSKTAI 254
>gi|312076390|ref|XP_003140839.1| hypothetical protein LOAG_05254 [Loa loa]
Length = 359
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 195 YIRFCT-RENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNE 253
Y+R + EN YA VEF++Q V AL+ NG KG+ L++ HS +I KPE K+ +
Sbjct: 2 YLRMTSGTENLPCAYAYVEFTNQPTVPIALQNNGIEFKGRCLRIQHSRVAIIKPERKTAD 61
Query: 254 AAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSHSPV 295
A +E+EEA+ RV + + + A+ + L D +S+SP+
Sbjct: 62 MALQEVEEAI-RVNQNPDKAANALSKLNQGLGMD--RSYSPL 100
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQA 217
+K++ RT+ A N+ +++ FF K GTVN +R N + A +EF+D+A
Sbjct: 129 EKLDRDTRTVFAYNLSTKADERDIYQFFSKAGTVNDVRIIYDRNTPRSKGMAYIEFADKA 188
Query: 218 CVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIE 260
+ AL L G L+ + + M ++++ +K A E AQ+++E
Sbjct: 189 NITDALALTGQMLRNQVV-MVKASEA-EKNIAWEAEQAQKKLE 229
>gi|218198344|gb|EEC80771.1| hypothetical protein OsI_23281 [Oryza sativa Indica Group]
Length = 372
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQAC 218
T + + +RRT+ +I++ V+ Q+L + F G V R C N ++A +EF+D
Sbjct: 172 TDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVG 231
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSI 244
AL L GT L +++ S +I
Sbjct: 232 ARAALTLGGTVLGYYPVRVLPSKTAI 257
>gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|12324022|gb|AAG51971.1|AC024260_9 RNA-binding protein, putative; 40942-42923 [Arabidopsis thaliana]
gi|48427656|gb|AAT42377.1| At1g53650 [Arabidopsis thaliana]
gi|332194855|gb|AEE32976.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 314
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I++SV+ + L F G V R C N ++A VEFSD A
Sbjct: 124 DSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSA 183
Query: 223 LKLNGT 228
L L GT
Sbjct: 184 LSLGGT 189
>gi|53793069|dbj|BAD54280.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|53793076|dbj|BAD54286.1| putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 206
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQAC 218
T + + +RRT+ +I++ V+ Q+L + F G V R C N ++A +EF+D
Sbjct: 8 TDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVG 67
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSI 244
AL L GT L +++ S +I
Sbjct: 68 ARAALTLGGTVLGYYPVRVLPSKTAI 93
>gi|290997908|ref|XP_002681523.1| predicted protein [Naegleria gruberi]
gi|284095147|gb|EFC48779.1| predicted protein [Naegleria gruberi]
Length = 408
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--------KYALVEFSDQAC 218
RT+ I+ S S EL+D+F G + R C + ++ K+A +E++
Sbjct: 205 RTIHISGIDSSFSEDELLDYFSVYGDITNYRLCNNDQQSSNSNTQLQTKFAFIEYATTEQ 264
Query: 219 VIPALKLNGTNLKGKT-LQMFHSTQSIQKPEAKS------NEAAQREIEEAMSRVKEAQN 271
+ A+ +NG+ L GK+ L++ HS +IQ P KS + +R I VK +Q+
Sbjct: 265 SLKAIMVNGS-LWGKSKLKVSHSKTAIQTPPKKSLIDKQYRDLVERTIHVGGIDVKLSQD 323
Query: 272 MISAAIDPVIGIL 284
+ A + + G +
Sbjct: 324 HVKAFFEELCGAI 336
>gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein from Arabidopsis
thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290
come from this gene [Arabidopsis thaliana]
Length = 829
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I++SV+ + L F G V R C N ++A VEFSD A
Sbjct: 69 DSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSA 128
Query: 223 LKLNGT 228
L L GT
Sbjct: 129 LSLGGT 134
>gi|357139501|ref|XP_003571320.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 328
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I+ V+ ++L F VG V R C N ++A +EF+D
Sbjct: 132 TSQAQRDEVIRRTVYVSDIDHQVTEEQLAALFINVGQVVDCRMCGDPNSVLRFAFIEFTD 191
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ AL L+GT L +++ S +I
Sbjct: 192 EEGARAALTLSGTVLGYYPVRVLPSKTAI 220
>gi|326514404|dbj|BAJ96189.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 324
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I+ V+ ++L F VG V R C N ++A +EF+D
Sbjct: 128 TSQAQRDEVIRRTVYVSDIDHQVTEEQLAALFINVGQVVDCRMCGDPNSVLRFAFIEFTD 187
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ AL L+GT L +++ S +I
Sbjct: 188 EEGARAALTLSGTVLGYYPVRVLPSKTAI 216
>gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|332194856|gb|AEE32977.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 308
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I++SV+ + L F G V R C N ++A VEFSD A
Sbjct: 118 DSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSA 177
Query: 223 LKLNGT 228
L L GT
Sbjct: 178 LSLGGT 183
>gi|170590202|ref|XP_001899861.1| Conserved hypothetical protein [Brugia malayi]
gi|158592493|gb|EDP31091.1| Conserved hypothetical protein, putative [Brugia malayi]
Length = 357
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 195 YIRFCT-RENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNE 253
Y+R + EN YA +EF++Q V AL+ NG KG+ L++ HS +I KPE K+ +
Sbjct: 2 YLRMTSGTENLPCAYAYIEFTNQPTVPIALQNNGIEFKGRCLRIQHSRVAIIKPERKTAD 61
Query: 254 AAQREIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSHSPV 295
A +E+EEA+ RV + + + A+ + L D +S+SP+
Sbjct: 62 MALQEVEEAI-RVNQNPDKSANALSKLNQGLGMD--RSYSPL 100
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVN-----YIRFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ + +P+EL +FF K+GT+N + RF R YA VEF Q+ V
Sbjct: 72 RSVYIGNVDYNTTPEELEEFFSKIGTINRVTILFDRFTGR---PKGYAYVEFESQSSVDS 128
Query: 222 ALKLNGTNLKGKTLQM 237
A+ L+G K + + +
Sbjct: 129 AIGLSGQEFKDRIISV 144
>gi|357124236|ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835921 [Brachypodium
distachyon]
Length = 351
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQAC 218
T + + +RRT+ +I++ V+ Q+L + F G V R C N ++A +EF+D
Sbjct: 158 TDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVG 217
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSI 244
AL L GT L +++ S +I
Sbjct: 218 ARAALSLAGTILGYYPVRVLPSKTAI 243
>gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 295
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I++SV+ + L F G V R C N ++A VEFSD A
Sbjct: 105 DSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSA 164
Query: 223 LKLNGT 228
L L GT
Sbjct: 165 LSLGGT 170
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC--TRENDTNKYALVEFSDQACVIPAL- 223
RT+ + + + P++L +FF VG + I+ + + Y + FSD C AL
Sbjct: 153 RTVFCMQLAARIRPRDLEEFFSTVGKIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 212
Query: 224 KLNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+LNG L G+ +++ H T+ A S
Sbjct: 213 QLNGFELAGRPMKVGHVTERTDASSASS 240
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPAL- 223
RT+ A N+ S EL +FF K G V+ IR T N + + +E+ D++ V AL
Sbjct: 169 RTVFASNLPIRASESELFEFFGKAGKVHDIRLITDRNSRKSKGFGYIEYLDKSSVPLALH 228
Query: 224 KLNGTNLKGKTL 235
+LNGT KG+T+
Sbjct: 229 QLNGTQCKGQTV 240
>gi|255646437|gb|ACU23697.1| unknown [Glycine max]
Length = 291
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+ E IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D+
Sbjct: 99 KREEMIRRTVYVSDIDQLVTEEQLAGLFLNCGQVVDYRVCGDPNSILRFAFVEFTDEDGA 158
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L L++ S +I
Sbjct: 159 RAALNLSGTMLGYYPLRVLPSKTAI 183
>gi|308807104|ref|XP_003080863.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116059324|emb|CAL55031.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 387
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK--YALVEFSDQA 217
+K++ RT+ N+ + + + FF KVG V +R N T A VEFSD+
Sbjct: 2 EKLDRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNSTTSKGMAYVEFSDRK 61
Query: 218 CVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQRE 258
+ PAL+ G L G + S++ EA+ N A + E
Sbjct: 62 FIHPALECTGMELHGNAI-------SVKTSEAEKNIAWEAE 95
>gi|303279518|ref|XP_003059052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460212|gb|EEH57507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 515
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQA 217
+K++ RT+ A N+ +E+ FF G V+ +R N + A VEF D+A
Sbjct: 134 EKLDRDTRTVFAYNLSTKADEREIYKFFSAAGIVSDVRIIYDRNTPRSKGMAYVEFKDKA 193
Query: 218 CVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAI 277
+ AL L G L+ + + + KS+EA + EA K + ++ +
Sbjct: 194 SIENALSLTGQTLRNQVVMV------------KSSEAEKNIAWEAEQATKREEQKLATTV 241
Query: 278 DPVI 281
DP I
Sbjct: 242 DPAI 245
>gi|297809287|ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
gi|297318364|gb|EFH48786.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
Length = 336
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEF 213
P T ++ E IRRT+ +I++ V+ ++L F G V R C N ++A +EF
Sbjct: 137 PRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEF 196
Query: 214 SDQACVIPALKLNGTNL 230
+D+ AL L+GT L
Sbjct: 197 TDEVGARAALSLSGTML 213
>gi|388492572|gb|AFK34352.1| unknown [Medicago truncatula]
Length = 376
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+ E IRRT+ A +I++ V+ ++L F G V R C N ++A +EF+D+
Sbjct: 185 KREEMIRRTVYASDIDQLVTEEQLASLFLNCGQVVDCRVCRDPNSILRFAFIEFTDEESA 244
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
A+ L+GT L L++ S +I
Sbjct: 245 RAAVSLSGTMLGYYPLRVLPSKTAI 269
>gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340299|gb|EFH70716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 769
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
IRRT+ +I++SV+ + L F G V R C N ++A VEFSD AL
Sbjct: 74 IRRTVYVSDIDQSVTEEVLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARAALS 133
Query: 225 LNGT 228
L GT
Sbjct: 134 LGGT 137
>gi|15235177|ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pfam: PF00076,
Score=5.5e-23, N=2) [Arabidopsis thaliana]
gi|4539439|emb|CAB40027.1| RNA-binding protein [Arabidopsis thaliana]
gi|4959384|gb|AAD34325.1| RNA-binding protein [Arabidopsis thaliana]
gi|7267758|emb|CAB78184.1| RNA-binding protein [Arabidopsis thaliana]
gi|14517528|gb|AAK62654.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|18700204|gb|AAL77712.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|21592407|gb|AAM64358.1| RNA-binding protein [Arabidopsis thaliana]
gi|332657507|gb|AEE82907.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 336
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEF 213
P T ++ E IRRT+ +I++ V+ ++L F G V R C N ++A +EF
Sbjct: 137 PRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEF 196
Query: 214 SDQACVIPALKLNGTNL 230
+D+ AL L+GT L
Sbjct: 197 TDEVGARTALNLSGTML 213
>gi|195626410|gb|ACG35035.1| CID11 [Zea mays]
Length = 378
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ +I++ V+ Q+L + F G V R C + ++A +EFSD A A
Sbjct: 189 DSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSDDAGARAA 248
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 249 LTLAGTILGCYPVRVLPSKTAI 270
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 122 VTNQIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQ 181
+ I G P +V+ + +L + P++ LP T D K E + RT+ NI++ V+ +
Sbjct: 251 LAGTILGCYPVRVLPSKTAILPVN--PKF--LPQTDDEK--EMVSRTVYCTNIDKKVTEE 304
Query: 182 ELVDFFQK-VGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNL 230
++ FFQ+ G V+ +R T + A VEF+ I AL +G L
Sbjct: 305 DVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVL 354
>gi|242093252|ref|XP_002437116.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
gi|241915339|gb|EER88483.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
Length = 364
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ +I++ V+ Q+L + F G V R C N ++A +EF+D A
Sbjct: 175 DSVRRTVYVSDIDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEFADDVGAQAA 234
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 235 LALGGTVLGFYPVKVLPSKTAI 256
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREN--DTNKYALVEFSDQA 217
+K++ RT+ N+ + + + FF KVG V +R N + A VEF+D+
Sbjct: 128 EKLDRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAYVEFADKK 187
Query: 218 CVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQRE 258
+ PAL+L G L G+ + + T +K A E AQ++
Sbjct: 188 FIHPALELTGQELNGQAIAV--KTSEAEKNIAWEAEQAQKK 226
>gi|50725622|dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group]
gi|215736921|dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639804|gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza sativa Japonica Group]
Length = 302
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E IRRT+ +I+ V+ ++L F G V R C N ++A +EF+D+
Sbjct: 110 QRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESA 169
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L +++ S +I
Sbjct: 170 RAALNLSGTVLGYYPVRVLPSKTAI 194
>gi|62867578|emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
Length = 201
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 157 YDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQ 216
Y ++ + IRRT+ I+ +V+ ++L F G V R C + ++A VEF+D+
Sbjct: 6 YKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFVEFADE 65
Query: 217 ACVIPALKLNGTNLKGKTLQMFHSTQSI 244
AL L GT L L++ S +I
Sbjct: 66 YSARAALSLCGTILGFSPLKVLPSKTAI 93
>gi|218200388|gb|EEC82815.1| hypothetical protein OsI_27601 [Oryza sativa Indica Group]
Length = 277
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E IRRT+ +I+ V+ ++L F G V R C N ++A +EF+D+
Sbjct: 85 QRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESA 144
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L +++ S +I
Sbjct: 145 RAALNLSGTVLGYYPVRVLPSKTAI 169
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 160 KKIEEIRR---TLVAINIEESVSPQELVDFF-QKVGTVNYIRFCTRE---NDTNKYALVE 212
K IEE +R T++ N+ SV +++ + F + G V I+ C R+ + A VE
Sbjct: 308 KDIEEAQRDDLTVLVSNMHLSVDERDIYELFSEHAGKVRDIQ-CVRDLRSGRSKGIAYVE 366
Query: 213 FSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
F Q VI AL + G ++KG+ +++ HS+Q+ + AK AQ+++++ + +KE+ N
Sbjct: 367 FYTQESVIKALSMTGMSMKGQGIRV-HSSQAEKNRAAK----AQKQLQD--NALKESDNP 419
Query: 273 ISAAIDPVIGILS 285
+ + ++G+LS
Sbjct: 420 TTIVVSNLLGVLS 432
>gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thaliana]
gi|332193408|gb|AEE31529.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 358
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
IRRT+ ++++ V+ ++L F G V R C N ++A +EF+D+ + AL
Sbjct: 171 IRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALN 230
Query: 225 LNGTNL 230
L+GT L
Sbjct: 231 LSGTML 236
>gi|14030687|gb|AAK53018.1|AF375434_1 At1g32790 [Arabidopsis thaliana]
gi|25090128|gb|AAN72236.1| At1g32790/F6N18_9 [Arabidopsis thaliana]
Length = 201
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
IRRT+ ++++ V+ ++L F G V R C N ++A +EF+D+ + AL
Sbjct: 14 IRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALN 73
Query: 225 LNGTNLKGKTLQMFHSTQSI 244
L+GT L +++ S +I
Sbjct: 74 LSGTMLGFYPVKVLPSKTAI 93
>gi|115445273|ref|NP_001046416.1| Os02g0244600 [Oryza sativa Japonica Group]
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113535947|dbj|BAF08330.1| Os02g0244600 [Oryza sativa Japonica Group]
Length = 359
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ +I++ V+ Q+L + F G V R C + ++A +EF+D A A
Sbjct: 170 DSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAA 229
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 230 LTLGGTMLGYYPVRVLPSKTAI 251
>gi|79325059|ref|NP_001031614.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|332657508|gb|AEE82908.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 326
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEF 213
P T ++ E IRRT+ +I++ V+ ++L F G V R C N ++A +EF
Sbjct: 137 PRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEF 196
Query: 214 SDQACVIPALKLNGTNL 230
+D+ AL L+GT L
Sbjct: 197 TDEVGARTALNLSGTML 213
>gi|356509167|ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787572 [Glycine max]
Length = 369
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+ E IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D+
Sbjct: 177 KREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFVEFTDEEGA 236
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L L++ S +I
Sbjct: 237 RAALSLSGTMLGYYPLRVLPSKTAI 261
>gi|357153308|ref|XP_003576409.1| PREDICTED: uncharacterized protein LOC100831764 [Brachypodium
distachyon]
Length = 294
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQK-VGTVNYIRFCTRENDTNKYALVEFSDQACVIP 221
E RT+ NIE+SV+ ELV FFQ G+V+ +R +N A VEF++ + I
Sbjct: 194 EMCSRTVYCTNIEKSVTCAELVGFFQAYFGSVSRVRLLGDDNHVTGIAFVEFAEVSADIA 253
Query: 222 ALKLNGTNLKG 232
AL+ G +G
Sbjct: 254 ALRSIGIYARG 264
>gi|218190389|gb|EEC72816.1| hypothetical protein OsI_06525 [Oryza sativa Indica Group]
Length = 287
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ +I++ V+ Q+L + F G V R C + ++A +EF+D A A
Sbjct: 98 DSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAA 157
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 158 LTLGGTMLGYYPVRVLPSKTAI 179
>gi|308081540|ref|NP_001182915.1| uncharacterized protein LOC100501201 [Zea mays]
gi|238008164|gb|ACR35117.1| unknown [Zea mays]
gi|413921443|gb|AFW61375.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 342
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E IRRT+ +I+ V+ + L F G V R C N ++A +EF+D+
Sbjct: 149 QRDEAIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGA 208
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L +++ S +I
Sbjct: 209 RAALNLSGTVLGYYPVKVLPSKTAI 233
>gi|156096635|ref|XP_001614351.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803225|gb|EDL44624.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 778
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 150 YPPLPITYDTKKIEEIRRT----LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT 205
YPP TY + E + +V NI+E S Q+L DF + VG+VNY +N
Sbjct: 309 YPPYGRTYSPNRNESREKKNALRIVVKNIDEKASWQDLKDFGRDVGSVNYANIIQDDN-K 367
Query: 206 NKYALVEFSDQACVIPALK-LNGTNLKG 232
++ ++E+ + V A++ LNG G
Sbjct: 368 ERFGIIEYYNSETVKKAVEVLNGRKFNG 395
>gi|388522717|gb|AFK49420.1| unknown [Medicago truncatula]
Length = 188
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
IRRT+ +I++ V+ ++L F G V R C N ++A +EF+D+ A+
Sbjct: 2 IRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAVS 61
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGIL 284
L+GT L L++ S +I S ++ E E SR N+
Sbjct: 62 LSGTMLGYYPLRVLPSKTAIAPVNPTSLPRSEDE-REMCSRTIYCTNI------------ 108
Query: 285 SKDKKKSHSPVRHL 298
DKK + + V+H
Sbjct: 109 --DKKLTQADVKHF 120
>gi|125581461|gb|EAZ22392.1| hypothetical protein OsJ_06050 [Oryza sativa Japonica Group]
Length = 299
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ +I++ V+ Q+L + F G V R C + ++A +EF+D A A
Sbjct: 110 DSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAA 169
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 170 LTLGGTMLGYYPVRVLPSKTAI 191
>gi|325184968|emb|CCA19460.1| hypothetical protein SELMODRAFT_173175 [Albugo laibachii Nc14]
Length = 466
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 34/298 (11%)
Query: 24 TRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKF-FDEKCVGISQHLTN-TVFI 81
T D M ++F Y GKVE + ++ A I +Q C ++ F E + L +F
Sbjct: 146 TADLMASIFSYFGKVEKIVIFEKA----IGLQ---CLIQLSFIEDATAAKKALNGVNIFP 198
Query: 82 DRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVPPNQVISTHDPV 141
D ++ Y + + E+ + GP + + ++++NQ +G + + T + +
Sbjct: 199 DCCCLIIHY-------SKLSQELVVKTNGPRTWDFT-NSNLSNQPDGNEADIALETCEAI 250
Query: 142 LVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTR 201
+ +T ++IE + L N+ ESV+ +L + F G V ++ +
Sbjct: 251 ----NKAAFATANMTNSGQEIETL--VLFVSNLRESVTCDQLFNLFSCYGNVARVK---K 301
Query: 202 ENDTNKYALVEFSDQACVIPA-LKLNGTNLKGKTLQMF---HSTQSIQKPEAKSNEAAQR 257
N +ALV+FS A A L L G L G++L++ H+ ++ +K+
Sbjct: 302 FNSKPDHALVQFSTPAFAQSALLHLRGFTLFGRSLEITFSKHAYINVSAGSSKTKSTGMV 361
Query: 258 EIEEAMSRVKEAQNMISAAID---PVIGILSKDKKKSHSPVR-HLVIVLIVVDVALDL 311
E + +R S I+ ++ I + D + +R HL+I V + L L
Sbjct: 362 EYGHSTNRFTGKFAGFSKNINCPTKILHISNLDISSNEEALRAHLLIHANVSNFRLKL 419
>gi|218187722|gb|EEC70149.1| hypothetical protein OsI_00850 [Oryza sativa Indica Group]
Length = 317
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I+ +V+ + L D F G V R C + ++A +EF+D+ A
Sbjct: 128 DSIRRTVYVSDIDHTVTEERLADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARAA 187
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 188 LNLGGTML 195
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 147 LPQYPP-LPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV-GTVNYIRFCTREND 204
LP P LP T D K E + RT+ NI++ V+ ++ +FF+++ G V+ +R
Sbjct: 210 LPVNPKFLPRTEDEK--EMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVH 267
Query: 205 TNKYALVEFSDQACVIPALKLNG 227
+ + A VEF C I AL +G
Sbjct: 268 STRIAFVEFVHAECAIMALNCSG 290
>gi|413921444|gb|AFW61376.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 482
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E IRRT+ +I+ V+ + L F G V R C N ++A +EF+D+
Sbjct: 149 QRDEAIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGA 208
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L +++ S +I
Sbjct: 209 RAALNLSGTVLGYYPVKVLPSKTAI 233
>gi|357127346|ref|XP_003565343.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 310
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ ++ +V+ + L D F G V R C + ++A +EFSD+ A
Sbjct: 121 DSIRRTVYVSELDHTVTEERLADIFANCGQVVDCRICGDPHSVLRFAFIEFSDEEGARAA 180
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 181 LNLGGTMLGFYPVRVLPSKTAI 202
>gi|297851722|ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
gi|297339584|gb|EFH70001.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
Length = 409
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
IRRT+ ++++ V+ ++L F G V R C N ++A +EF+D+ + AL
Sbjct: 178 IRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALN 237
Query: 225 LNGTNL 230
L+GT L
Sbjct: 238 LSGTML 243
>gi|115474513|ref|NP_001060853.1| Os08g0116400 [Oryza sativa Japonica Group]
gi|113622822|dbj|BAF22767.1| Os08g0116400, partial [Oryza sativa Japonica Group]
Length = 283
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I+ V+ ++L F G V R C N ++A +EF+D
Sbjct: 87 TSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTD 146
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ AL L+GT L +++ S +I
Sbjct: 147 EESARAALNLSGTVLGYYPVRVLPSKTAI 175
>gi|357168503|ref|XP_003581679.1| PREDICTED: uncharacterized protein LOC100838448 [Brachypodium
distachyon]
Length = 741
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
+TL N+ SV +++ +FFQ+V V +RF T E+ ++K +A VEF+ V A +L
Sbjct: 473 KTLFVGNLSYSVGIEQVKEFFQEVAEVVDVRFATFEDGSSKGFAHVEFATTEAVHKAREL 532
Query: 226 NGTNLKGKTLQM 237
NG +L G+ +++
Sbjct: 533 NGHDLMGRPVRL 544
>gi|222617961|gb|EEE54093.1| hypothetical protein OsJ_00835 [Oryza sativa Japonica Group]
Length = 317
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I+ +V+ + L D F G V R C + ++A +EF+D+ A
Sbjct: 128 DSIRRTVYVSDIDHTVTEERLADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTA 187
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 188 LNLGGTML 195
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 147 LPQYPP-LPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV-GTVNYIRFCTREND 204
LP P LP T D K E + RT+ NI++ V+ ++ +FF+++ G V+ +R
Sbjct: 210 LPVNPKFLPRTEDEK--EMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVH 267
Query: 205 TNKYALVEFSDQACVIPALKLNG 227
+ + A VEF C I AL +G
Sbjct: 268 STRIAFVEFVHAECAIMALNCSG 290
>gi|79319100|ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|332193409|gb|AEE31530.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 406
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
IRRT+ ++++ V+ ++L F G V R C N ++A +EF+D+ + AL
Sbjct: 171 IRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALN 230
Query: 225 LNGTNL 230
L+GT L
Sbjct: 231 LSGTML 236
>gi|212274823|ref|NP_001130545.1| uncharacterized protein LOC100191644 [Zea mays]
gi|194689440|gb|ACF78804.1| unknown [Zea mays]
gi|224030729|gb|ACN34440.1| unknown [Zea mays]
gi|413926010|gb|AFW65942.1| CID11 [Zea mays]
Length = 379
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ +I++ V+ Q+L + F G V R C + ++A +EFSD A
Sbjct: 190 DSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSDDGGARAA 249
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 250 LTLAGTILGCYPVRVLPSKTAI 271
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 112 NSGEPKLPAHVTNQIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVA 171
+ G + + I G P +V+ + +L + P++ LP T D K E + RT+
Sbjct: 242 DDGGARAALTLAGTILGCYPVRVLPSKTAILPVN--PKF--LPQTDDEK--EMVSRTVYC 295
Query: 172 INIEESVSPQELVDFFQK-VGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNL 230
NI++ V+ +++ FFQ+ G V+ +R T + A VEF+ I AL +G L
Sbjct: 296 TNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVL 355
>gi|115435208|ref|NP_001042362.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|56201749|dbj|BAD73106.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|113531893|dbj|BAF04276.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|215737283|dbj|BAG96212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 308
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I+ +V+ + L D F G V R C + ++A +EF+D+ A
Sbjct: 119 DSIRRTVYVSDIDHTVTEERLADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTA 178
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 179 LNLGGTML 186
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 147 LPQYPP-LPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV-GTVNYIRFCTREND 204
LP P LP T D K E + RT+ NI++ V+ ++ +FF+++ G V+ +R
Sbjct: 201 LPVNPKFLPRTEDEK--EMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVH 258
Query: 205 TNKYALVEFSDQACVIPALKLNG 227
+ + A VEF C I AL +G
Sbjct: 259 STRIAFVEFVHAECAIMALNCSG 281
>gi|1174153|gb|AAA86641.1| RNA-binding protein [Arabidopsis thaliana]
Length = 336
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEF 213
P T ++ E IRRT+ +I + V+ ++L F G V R C N ++A +EF
Sbjct: 137 PRTSLAQREEIIRRTVYVSDIYQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEF 196
Query: 214 SDQACVIPALKLNGTNL 230
+D+ AL L+GT L
Sbjct: 197 TDEVGARTALNLSGTML 213
>gi|156045603|ref|XP_001589357.1| hypothetical protein SS1G_09992 [Sclerotinia sclerotiorum 1980]
gi|154694385|gb|EDN94123.1| hypothetical protein SS1G_09992 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 194
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R L N+ +V+P+EL D F K G + IR N T A V + D A
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKFGAIRQIRQGIATN-TKGTAFVVYEDVTDSKTAC 68
Query: 224 -KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNE----AAQREI-EEAMSRVKEAQNM 272
KLNG N + + L ++H + ++K A SN+ AA++ I A+S K +M
Sbjct: 69 DKLNGFNFQNRYLVVLYHQPEKMEKMRANSNQSDSYAARKAICPNAVSSTKSTASM 124
>gi|21700195|dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]
Length = 620
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
+TL N+ SV ++ +FF+ G V +RF T E+ + K Y VEF AL+L
Sbjct: 367 KTLFVGNLSYSVEQADVENFFKDAGEVQEVRFSTHEDGSFKGYGHVEFVTAEAAHKALEL 426
Query: 226 NGTNLKGKTLQM 237
NG +L G+ +++
Sbjct: 427 NGQDLLGRAVRL 438
>gi|403221560|dbj|BAM39693.1| uncharacterized protein TOT_010001366 [Theileria orientalis strain
Shintoku]
Length = 458
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK-LNG 227
+ N+++SVS Q+L DF ++ G VNY + N ++ L+EF++ V ALK LNG
Sbjct: 332 ITVTNLDQSVSWQDLKDFARQAGEVNYASIIIKGN--KRFGLIEFTNDESVQNALKDLNG 389
Query: 228 TNLKGKTLQMFH 239
+ L++ H
Sbjct: 390 KKIDVNKLELIH 401
>gi|242080315|ref|XP_002444926.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
gi|241941276|gb|EES14421.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
Length = 348
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I+ V+ + L F G V R C N ++A +EF+D
Sbjct: 152 TSMAQRDEVIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTD 211
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ AL L+GT L +++ S +I
Sbjct: 212 EEGARAALNLSGTVLGYYPVRVLPSKTAI 240
>gi|356516142|ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
Length = 369
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+ E IRRT+ +I++ V+ ++L F G V R C N ++A +EF+D
Sbjct: 177 KREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFIEFTDDEGA 236
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L L++ S +I
Sbjct: 237 RAALSLSGTMLGYYPLRVLPSKTAI 261
>gi|413921445|gb|AFW61377.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 315
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E IRRT+ +I+ V+ + L F G V R C N ++A +EF+D+
Sbjct: 149 QRDEAIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGA 208
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L +++ S +I
Sbjct: 209 RAALNLSGTVLGYYPVKVLPSKTAI 233
>gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672887|gb|EDQ59418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ + IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D
Sbjct: 60 TSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTD 119
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ AL L GT L +++ S +I
Sbjct: 120 EEGARAALSLAGTMLGYYPVRVLPSKTAI 148
>gi|407916455|gb|EKG09823.1| hypothetical protein MPH_13030 [Macrophomina phaseolina MS6]
Length = 115
Score = 45.8 bits (107), Expect = 0.038, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +VSP+EL D F K G V IR N T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVSPEELFDLFGKFGPVRQIRQGI-ANATKGTAFVVYEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEAMSR 265
KLNG N + + L ++H + + + + S+ A ++E SR
Sbjct: 69 D----KLNGFNFQNRYLVVLYHQPEKMSRSKDDSSNRAS-DLETGKSR 111
>gi|357140847|ref|XP_003571974.1| PREDICTED: uncharacterized protein LOC100841044 [Brachypodium
distachyon]
Length = 350
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ ++++ V+ Q+L + F G V R C + ++A +EF+D A A
Sbjct: 161 DSVRRTVYVSDVDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAA 220
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 221 LNLAGTMLGYYPVRVLPSKTAI 242
>gi|50725623|dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
Length = 201
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E IRRT+ +I+ V+ ++L F G V R C N ++A +EF+D+
Sbjct: 9 QRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESA 68
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L +++ S +I
Sbjct: 69 RAALNLSGTVLGYYPVRVLPSKTAI 93
>gi|356516140|ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
Length = 378
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 158 DTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQ 216
D +K EE+ RRT+ +I++ V+ ++L F G V R C N ++A +EF+D+
Sbjct: 183 DMEKREEMTRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFIEFTDE 242
Query: 217 ACVIPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L L++ S +I
Sbjct: 243 EGARAALNLSGTMLGYYPLRVLPSKTAI 270
>gi|412993528|emb|CCO14039.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQA 217
+KI+ RT A N+ +++ FF K G V +R N + A VEF D++
Sbjct: 243 EKIDRDTRTCFAYNLSTKSDERDIFKFFMKAGEVTDVRIIYDRNRPISKGMAYVEFQDKS 302
Query: 218 CVIPALKLNGTNLKGKTLQMFHS 240
+ AL+L G L+G+ + + HS
Sbjct: 303 SIPKALELTGETLRGQKVMVKHS 325
>gi|224028543|gb|ACN33347.1| unknown [Zea mays]
gi|413941691|gb|AFW74340.1| CID11 [Zea mays]
Length = 328
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I+ V+ + L F G V R C N ++A +EF+D
Sbjct: 132 TSMAQRDEIIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTD 191
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ AL L+GT L +++ S +I
Sbjct: 192 EEGARAALNLSGTVLGYYPVRVLPSKTAI 220
>gi|226529745|ref|NP_001150079.1| CID11 [Zea mays]
gi|195636508|gb|ACG37722.1| CID11 [Zea mays]
Length = 328
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I+ V+ + L F G V R C N ++A +EF+D
Sbjct: 132 TSMAQRDEIIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTD 191
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ AL L+GT L +++ S +I
Sbjct: 192 EEGARAALNLSGTVLGYYPVRVLPSKTAI 220
>gi|302843264|ref|XP_002953174.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
gi|300261561|gb|EFJ45773.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
Length = 556
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREN--DTNKYALVEFSDQACVIPALK 224
RT+ A N+ +++ +FF KVG V IR T +N + A VEFS VI A+
Sbjct: 79 RTVFAYNLSLRADERDIFEFFSKVGRVVDIRLITDKNTKKSRGLAYVEFSKVEEVISAVA 138
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSN---EAAQREIEEAMS 264
L G LKG+ + ++ EA+ N EAAQ++ A +
Sbjct: 139 LTGNILKGQPVM-------VKASEAEKNMAWEAAQQQKHSAQA 174
>gi|198438310|ref|XP_002131910.1| PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)-binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) [Ciona intestinalis]
Length = 225
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 151 PPLPITYD----TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDT 205
PP T+ +K+E R++ N++ + +EL F G++N + C R +
Sbjct: 81 PPASATFAFPTIEEKVEADSRSVFVGNVDYGATAEELEQHFHGTGSINRVTILCDRYSGH 140
Query: 206 NK-YALVEFSDQACVIPALKLNGTNLKGKTLQM 237
K +A VEF+D V A L+GT +G+ LQ+
Sbjct: 141 PKGFAYVEFADTESVETATALDGTLFRGRQLQV 173
>gi|357464151|ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355491405|gb|AES72608.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 384
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+ E IRRT+ +I++ V+ ++L F G V R C N ++A +EF+D+
Sbjct: 185 KREEMIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESA 244
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
A+ L+GT L L++ S +I
Sbjct: 245 RAAVSLSGTMLGYYPLRVLPSKTAI 269
>gi|440640405|gb|ELR10324.1| pre-mRNA branch site protein p14 [Geomyces destructans 20631-21]
Length = 114
Score = 45.4 bits (106), Expect = 0.049, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N+T A V F D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGI-ANNTKGTAFVVFEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSR 265
KLNG N + + L + + +K ++K + A++E E + R
Sbjct: 69 D----KLNGFNFQSRYLVVLY--HQPEKMKSKEDLEARKENLEQLKR 109
>gi|225462109|ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
[Vitis vinifera]
gi|296088694|emb|CBI38144.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 157 YDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQ 216
+ ++ + IRRT+ +I++ V+ + L F G V R C + ++A VEF+D+
Sbjct: 97 FRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHSVLRFAFVEFADE 156
Query: 217 ACVIPALKLNGTNLKGKTLQMFHSTQSI 244
AL L GT L +++ S +I
Sbjct: 157 HGARAALNLGGTMLGYYPVRVLPSKTAI 184
>gi|226507984|ref|NP_001149092.1| LOC100282713 [Zea mays]
gi|195624680|gb|ACG34170.1| CID11 [Zea mays]
gi|414875767|tpg|DAA52898.1| TPA: CID11 [Zea mays]
Length = 299
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ ++ +V+ + L D F G V R C + ++A +EFSD+ A
Sbjct: 110 DSIRRTVYVSELDHTVTEERLADIFTTCGQVVDCRICGDPHSVLRFAFIEFSDEEGARTA 169
Query: 223 LKLNGT 228
L L GT
Sbjct: 170 LNLGGT 175
>gi|413941690|gb|AFW74339.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 286
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E IRRT+ +I+ V+ + L F G V R C N ++A +EF+D+
Sbjct: 136 QRDEIIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGA 195
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L +++ S +I
Sbjct: 196 RAALNLSGTVLGYYPVRVLPSKTAI 220
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 143 VQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE 202
+Q G P P T + K+ + R V N++ + +P+E+ FQ GTVN + T +
Sbjct: 67 MQGGPPGGDPSASTAEAKEQVDARSVYVG-NVDYACTPEEVQQHFQACGTVNRVTILTDK 125
Query: 203 NDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
K +A VEF +Q V AL LN + L G+ ++
Sbjct: 126 FGQPKGFAYVEFLEQEAVQEALNLNESELHGRQIK 160
>gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685203|gb|EDQ71600.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ + IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D
Sbjct: 17 TSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTD 76
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ AL L GT L +++ S +I
Sbjct: 77 EEGARAALSLAGTMLGYYPVRVLPSKTAI 105
>gi|392577175|gb|EIW70305.1| hypothetical protein TREMEDRAFT_71583 [Tremella mesenterica DSM
1558]
Length = 339
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNY--IRFCTRENDTNKYALVEFSDQACVIPALK 224
RT+ N+ VS ++L + F +VG V I+F + YA V F D+A I A++
Sbjct: 5 RTVFVANLAFDVSEEQLANVFSEVGPVQSAEIKFDNQTGRPKGYAFVTFYDEATAISAIR 64
Query: 225 -LNGTNLKGKTLQM 237
L TN+ G+TL++
Sbjct: 65 NLRDTNVNGRTLRI 78
>gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [Ricinus communis]
gi|223528275|gb|EEF30325.1| RNA-binding protein, putative [Ricinus communis]
Length = 385
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
IRRT+ +I++ V+ ++L F G V R C N ++A +EF+D+ AL
Sbjct: 198 IRRTVYVSDIDQQVTEEQLAGLFVHCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 257
Query: 225 LNGTNLKGKTLQMFHSTQSI 244
L+GT L L++ S +I
Sbjct: 258 LSGTVLGFYPLRVLPSKTAI 277
>gi|242051635|ref|XP_002454963.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
gi|241926938|gb|EES00083.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
Length = 298
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ ++ +V+ + L D F G V R C + ++A +EFSD+ A
Sbjct: 109 DSIRRTVYVSELDHTVTEERLADIFATCGQVVDCRICGDPHSVLRFAFIEFSDEEGARTA 168
Query: 223 LKLNGT 228
L L GT
Sbjct: 169 LNLGGT 174
>gi|147803358|emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]
Length = 195
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E I+RT+ +I++ V+ ++L F G V R C N ++A VEF+D+ A
Sbjct: 6 EVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 65
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 66 LSLAGTMLGYYPVRVLPSKTAI 87
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEFSDQACVIPALK 224
R++ N++ + +P EL F+ G++N I T + N +A +EFSD + V AL
Sbjct: 124 RSVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFSDASYVPQALS 183
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ L++
Sbjct: 184 LNDSLFKGRNLKI 196
>gi|355718888|gb|AES06420.1| splicing factor, arginine/serine-rich 11 [Mustela putorius furo]
Length = 173
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 54 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 112
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 113 RVREAQSLISAAIEP 127
>gi|224118386|ref|XP_002317806.1| predicted protein [Populus trichocarpa]
gi|222858479|gb|EEE96026.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E I+RT+ +I++ V+ ++L F G V R C N ++A VEF+D+
Sbjct: 101 QRDEIIKRTVYVSDIDQQVTEEQLAGLFIHCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 160
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L L++ S +I
Sbjct: 161 RTALSLSGTVLGFYPLRVLPSKTAI 185
>gi|224056565|ref|XP_002298913.1| predicted protein [Populus trichocarpa]
gi|222846171|gb|EEE83718.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 157 YDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQ 216
Y ++ + IRRT+ +I++ V+ + L F G V R C + ++A VEF+D+
Sbjct: 112 YRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVVDCRVCGDPHSVLRFAFVEFADE 171
Query: 217 ACVIPALKLNGTNL 230
AL L GT L
Sbjct: 172 QGARAALNLGGTML 185
>gi|359474160|ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
Length = 398
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D
Sbjct: 202 TSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTD 261
Query: 216 QACVIPALKLNGTNL 230
+ AL L GT L
Sbjct: 262 EEGARAALSLAGTML 276
>gi|346464877|gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 146 GLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT 205
G Q P K E R++ N++ S +P+E+ FQ GTVN + T +
Sbjct: 68 GAGQDPASAAANQESKQEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQ 127
Query: 206 NK-YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
K YA VEF + V AL+LN + L G+ L+
Sbjct: 128 PKGYAYVEFLEVEAVQEALQLNESELHGRQLK 159
>gi|326502318|dbj|BAJ95222.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E IRRT+ ++ +V+ + L + F G V R C N ++A +EF+ + A
Sbjct: 128 ESIRRTVYVSELDHTVTEERLAEIFANCGQVVDCRICGDPNSVMRFAFIEFAGEEGARAA 187
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 188 LNLGGTMLGFYPVRVLPSKTAI 209
>gi|297742454|emb|CBI34603.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D
Sbjct: 201 TSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTD 260
Query: 216 QACVIPALKLNGTNL 230
+ AL L GT L
Sbjct: 261 EEGARAALSLAGTML 275
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 166 RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEFSDQACVIPAL 223
RR++ N++ +P+EL + F+ G++ I + + +A +EF D+A V AL
Sbjct: 115 RRSIYVGNVDYGSAPEELQEHFKSCGSIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNAL 174
Query: 224 KLNGTNLKGKTLQMF 238
LN T +G+ L++
Sbjct: 175 LLNDTMFRGRQLKVL 189
>gi|297829996|ref|XP_002882880.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
gi|297328720|gb|EFH59139.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I++SV+ + L F G V R C + ++A VEF+D A
Sbjct: 145 DSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAREA 204
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 205 LSLGGTML 212
>gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
gi|11994215|dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana]
gi|332642006|gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
Length = 327
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ +I++SV+ + L F G V R C + ++A VEF+D A
Sbjct: 137 DSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAHEA 196
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 197 LSLGGTML 204
>gi|326436969|gb|EGD82539.1| hypothetical protein PTSG_03191 [Salpingoeca sp. ATCC 50818]
Length = 248
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 14 VQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGISQ 73
V VA ++ DQ++ L GKVE+LR+Y RD + P Q +C V F E+ ++
Sbjct: 3 VGVAGVSSLVREDQVRELLAKCGKVEELRVY---RDNTDPRQRTVC-VNFEKEEDGMVAL 58
Query: 74 HLTNTVFIDRALVV 87
HLT+ IDR + V
Sbjct: 59 HLTDKFLIDRLIKV 72
>gi|417410559|gb|JAA51751.1| Putative serine/arginine-rich splicing factor 11, partial [Desmodus
rotundus]
Length = 419
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 101 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 159
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 160 RVREAQSLISAAIEP 174
>gi|417410557|gb|JAA51750.1| Putative serine/arginine-rich splicing factor 11, partial [Desmodus
rotundus]
Length = 419
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ ++ +EIEEAM
Sbjct: 101 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMK 159
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 160 RVREAQSLISAAIEP 174
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 160 KKIEEIRR---TLVAINIEESVSPQELVDFF-QKVGTVNYIRFCTRE---NDTNKYALVE 212
K IEE +R T++ N+ SV +++ + F + G V I+ C R+ + A VE
Sbjct: 307 KDIEEAQRDDLTVLVSNMHLSVDERDIYELFSEHAGKVRDIQ-CVRDLRSGRSKGIAYVE 365
Query: 213 FSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
F Q VI AL + G ++KG+ +++ HS+Q A+ N AA+ + + +KE+ N
Sbjct: 366 FYTQESVIKALSMTGMSMKGQGIRV-HSSQ------AEKNRAAKAAKQLQDNALKESDNP 418
Query: 273 ISAAIDPVIGILS 285
+ + ++G+LS
Sbjct: 419 TTIVVSNLLGVLS 431
>gi|302769672|ref|XP_002968255.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
gi|300163899|gb|EFJ30509.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
Length = 260
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D+ A
Sbjct: 77 ECIRRTVYVSDIDQQVTEEQLAALFINCGQVIDCRVCGDPNSVLRFAFVEFTDEEGARQA 136
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 137 LNLAGTML 144
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 159 TKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSD 215
T+ EE+ R++ N++ S SP+EL FQ G++N + + YA VEF++
Sbjct: 65 TEDKEEVDSRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAE 124
Query: 216 QACVIPALKLNGTNLKGKTLQM 237
+ V AL LN + KG+ +++
Sbjct: 125 PSLVAQALVLNDSVFKGRNIKV 146
>gi|428673321|gb|EKX74234.1| conserved hypothetical protein [Babesia equi]
Length = 394
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 172 INIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK-LNGTNL 230
+N++++VS Q+L DF ++ G V Y T+ ++ L+EF+D+A VI A K L+G +
Sbjct: 276 LNLDQTVSWQDLKDFARQAGDVVYASIVTK--GQRRFGLIEFADEATVINACKELSGKKI 333
Query: 231 KGKTLQMFH 239
L++ H
Sbjct: 334 ANNKLEIVH 342
>gi|388509636|gb|AFK42884.1| unknown [Lotus japonicus]
Length = 313
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ +I++ V+ + L F G+V R C + ++A VEF+D+ A
Sbjct: 123 DSVRRTVYVSDIDQHVTEERLAALFTTCGSVIDCRICGDPHSVLRFAFVEFADEYGARAA 182
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L+GT L +++ S +I
Sbjct: 183 LNLSGTVLGYYPVRVLPSKTAI 204
>gi|147804944|emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
Length = 369
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T ++ E IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D
Sbjct: 202 TSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTD 261
Query: 216 QACVIPALKLNGTNL 230
+ AL L GT L
Sbjct: 262 EEGARAALSLAGTML 276
>gi|355718891|gb|AES06421.1| splicing factor, arginine/serine-rich 12 [Mustela putorius furo]
Length = 117
Score = 44.3 bits (103), Expect = 0.11, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 93 GEIPDEQRALEIAAQQQGPNSGEPK---LPAHVTNQIE--GVPPNQV----ISTHDPVLV 143
G+IP+E +AL + A S P LP N + GV + + + DP +
Sbjct: 1 GKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIT 60
Query: 144 QHGLPQYPPLPITYDTKKIEEIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIR 197
G PPL D KI+EIRRT+ N+ ++ + +L++FF++VG V ++R
Sbjct: 61 TLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVR 115
>gi|255578158|ref|XP_002529948.1| RNA-binding protein, putative [Ricinus communis]
gi|223530546|gb|EEF32425.1| RNA-binding protein, putative [Ricinus communis]
Length = 281
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 157 YDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQ 216
Y ++ + IRRT+ +I++ V+ + L F G V R C + ++A VEF+D+
Sbjct: 103 YRAQRDDSIRRTVYVSDIDQHVTEERLAGLFSSCGQVVDCRVCGDPHSVLRFAFVEFADE 162
Query: 217 ACVIPALKLNGTNL 230
AL L GT L
Sbjct: 163 HGARAALNLGGTVL 176
>gi|225462880|ref|XP_002273141.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Vitis
vinifera]
Length = 179
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFSDQACVIPAL 223
R++ N++ S +P+E+ FQ GTVN R R N + YA VEF + V AL
Sbjct: 56 RSVFVGNVDYSCTPEEVQQHFQACGTVN--RVTIRSNKYGQPKGYAYVEFLETEAVQEAL 113
Query: 224 KLNGTNLKGKTLQ 236
LN + L G+ L+
Sbjct: 114 LLNESELHGRQLK 126
>gi|302788706|ref|XP_002976122.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
gi|300156398|gb|EFJ23027.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
Length = 267
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E IRRT+ +I++ V+ ++L F G V R C N ++A VEF+D+ A
Sbjct: 82 ECIRRTVYVSDIDQQVTEEQLAALFINCGQVIDCRVCGDPNSVLRFAFVEFTDEEGARQA 141
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 142 LNLAGTML 149
>gi|225462878|ref|XP_002273112.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Vitis
vinifera]
Length = 186
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFSDQACVIPAL 223
R++ N++ S +P+E+ FQ GTVN R R N + YA VEF + V AL
Sbjct: 63 RSVFVGNVDYSCTPEEVQQHFQACGTVN--RVTIRSNKYGQPKGYAYVEFLETEAVQEAL 120
Query: 224 KLNGTNLKGKTLQ 236
LN + L G+ L+
Sbjct: 121 LLNESELHGRQLK 133
>gi|226530673|ref|NP_001141946.1| uncharacterized protein LOC100274095 [Zea mays]
gi|194706550|gb|ACF87359.1| unknown [Zea mays]
gi|195626910|gb|ACG35285.1| CID11 [Zea mays]
gi|413947723|gb|AFW80372.1| CID11 [Zea mays]
Length = 302
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ ++ +V+ + L D F G V R C + ++A +EFSD+ A
Sbjct: 113 DSVRRTVYVSELDHTVTEERLADIFATCGHVVDCRICGDPHSVLRFAFIEFSDEEGARTA 172
Query: 223 LKLNGT 228
L L GT
Sbjct: 173 LNLGGT 178
>gi|296087478|emb|CBI34067.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFSDQACVIPAL 223
R++ N++ S +P+E+ FQ GTVN R R N + YA VEF + V AL
Sbjct: 57 RSVFVGNVDYSCTPEEVQQHFQACGTVN--RVTIRSNKYGQPKGYAYVEFLETEAVQEAL 114
Query: 224 KLNGTNLKGKTLQ 236
LN + L G+ L+
Sbjct: 115 LLNESELHGRQLK 127
>gi|116781618|gb|ABK22180.1| unknown [Picea sitchensis]
Length = 288
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ +RRT+ +I+ V+ ++L F G V R C N ++A +EF+D+ A
Sbjct: 99 DSVRRTVYVCDIDHQVTEEQLAALFINCGQVIDCRICGDPNSVLRFAFIEFADEQGARAA 158
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L GT L +++ S +I
Sbjct: 159 LSLAGTMLGYYPVRVLPSKTAI 180
>gi|168031266|ref|XP_001768142.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680580|gb|EDQ67015.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGIS 72
V+V+N++P+AT +Q F + G+++ ++L +D ++ S+ +V F D + + +
Sbjct: 8 TVRVSNVSPKATEHDIQDFFSFSGEIQYIKLI---KDGAL---SQTAFVTFTDAQALETA 61
Query: 73 QHLTNTVFIDRALVVTPYNSGE 94
L+ +D+A+ +TP + E
Sbjct: 62 LLLSGATVVDQAVTITPADESE 83
>gi|224061485|ref|XP_002300503.1| predicted protein [Populus trichocarpa]
gi|222847761|gb|EEE85308.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ + +RRT+ +I++ V+ ++L F G V R C N +A +EF+D+
Sbjct: 9 QREDTVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPNSVLHFAFIEFTDEEGA 68
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+GT L +++ S +I
Sbjct: 69 RAALSLSGTMLGYYPVKVLPSKTAI 93
>gi|71749032|ref|XP_827855.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833239|gb|EAN78743.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261333587|emb|CBH16582.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 377
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ + L F + GT+ R+ D +Y ++F+ + A+K NG L G
Sbjct: 15 NIDRSVTLEVLRQVFSQCGTIVDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFTLAG 74
Query: 233 KTLQMFHSTQSIQKPEAKSN 252
+ +++ S ++ +PE +N
Sbjct: 75 RKIKVGISKGNVGRPEGYNN 94
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVI 220
E RT+ + + + V+ +++ DFF KVG V +R + N + VEF+D + V
Sbjct: 180 ERDSRTVFIMQLAKQVTIRDIQDFFSKVGQVRDVRLISDRNSRRSKGIGYVEFTDASAVT 239
Query: 221 PALKLNGTNLKG 232
A+KL+G L G
Sbjct: 240 LAIKLSGQKLLG 251
>gi|255569758|ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein, putative [Ricinus communis]
Length = 198
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GTVN I T + YA VEF + V AL L
Sbjct: 70 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKYGQPKGYAYVEFLEPEAVQEALLL 129
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 130 NESELHGRQLK 140
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 168 TLVAINIEESVSPQELVDFFQKVGTVNYIRFCTR--ENDTNKYALVEFSDQACVIPALKL 225
T+ N+ + E+ +FF+K G V +RF + +A +EF + V ALKL
Sbjct: 119 TIFVKNLAFDCTEDEVGEFFEKCGKVVNVRFVYHYSQKHFKGFAFIEFKMNSSVNAALKL 178
Query: 226 NGTNLKGKTLQMFHSTQSIQK 246
NGT KG+ L + + S +K
Sbjct: 179 NGTEFKGRKLTIDYEVGSQKK 199
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 39/241 (16%)
Query: 14 VQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGISQ 73
V V NI AT D ++ LF G V+ +RL R V S ++ F + S
Sbjct: 1177 VFVRNIDYAATEDDIRELFSKYGTVKSIRLISKGRG----VHSGYGFLDFETTESANASL 1232
Query: 74 HLTNTVFIDRA-LVVTPYNSGEIPDEQRALEIAAQQQGPN--SGEPKLPAHVTNQIEGVP 130
L F R LVV G P +++ Q + PN +G P ++ G P
Sbjct: 1233 ELHEQKFKSRKLLVVISEPQGGAPANKKS-SGKTQAKFPNGAAGSP--------EVAGSP 1283
Query: 131 PNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV 190
+ S LP+ P DT I + +TL +NI ++V+ ++ F+K
Sbjct: 1284 MSTTASE---------LPEAP------DTDAIRQ--KTLYVLNIADTVNDSKIRAVFEKY 1326
Query: 191 GTVNYIRFCTRENDTNKYALVEFSDQACVIPA-LKLNGTNLKGKTLQMFHSTQSIQKPEA 249
G+++ ++ ++ A+VEF + A L L+G + G+ + F S Q++ K A
Sbjct: 1327 GSLHKVQMQL----NHQAAIVEFDEVKDAGKAMLALDGHEIDGRAIS-FGSRQAMLKTGA 1381
Query: 250 K 250
+
Sbjct: 1382 E 1382
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
+TL N+ +V E+ FF + G V+ IRF T ++ + K +A VEF+ A +L
Sbjct: 465 KTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATADDGSFKGFAHVEFATTEAAQKAYEL 524
Query: 226 NGTNLKGKTLQM 237
NG +L G+ +++
Sbjct: 525 NGHDLSGRPVRL 536
>gi|34364678|emb|CAE45791.1| hypothetical protein [Homo sapiens]
Length = 372
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ + +EIEEAM
Sbjct: 54 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSD-TSSKEIEEAMK 112
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 113 RVREAQSLISAAIEP 127
>gi|302803765|ref|XP_002983635.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
gi|300148472|gb|EFJ15131.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
Length = 573
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLN 226
+TL NI SV+ ++L +F+ G V +R +N +A VEFS +A AL +
Sbjct: 316 KTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGFAHVEFSTEAAAQKALNKS 375
Query: 227 GTNLKGKTL 235
G ++ G+ +
Sbjct: 376 GQDMGGRRI 384
>gi|335775918|gb|AEH58732.1| splicing factor, arginine/serine-rich 1-like protein, partial
[Equus caballus]
Length = 372
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ + +EIEEAM
Sbjct: 54 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSD-TSSKEIEEAMK 112
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 113 RVREAQSLISAAIEP 127
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL L
Sbjct: 86 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNL 145
Query: 226 NGTNLKGKTLQ 236
N + L G+ ++
Sbjct: 146 NESELHGRQIK 156
>gi|449523199|ref|XP_004168611.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GTVN I T + K YA VEF + V AL L
Sbjct: 68 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLL 127
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 128 NESELHGRQLK 138
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ S SP+EL FQ G++N + +F + YA VEFS+ V
Sbjct: 127 RSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQ---PKGYAYVEFSEPNLVAQ 183
Query: 222 ALKLNGTNLKGKTLQM 237
AL LN + KG+ +++
Sbjct: 184 ALVLNDSVFKGRNIKV 199
>gi|302817804|ref|XP_002990577.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
gi|300141745|gb|EFJ08454.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
Length = 602
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLN 226
+TL NI SV+ ++L +F+ G V +R +N +A VEFS +A AL +
Sbjct: 345 KTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGFAHVEFSTEAAAQKALNKS 404
Query: 227 GTNLKGKTL 235
G ++ G+ +
Sbjct: 405 GQDMGGRRI 413
>gi|449438769|ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GTVN I T + K YA VEF + V AL L
Sbjct: 68 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLL 127
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 128 NESELHGRQLK 138
>gi|224115532|ref|XP_002317057.1| predicted protein [Populus trichocarpa]
gi|222860122|gb|EEE97669.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E +RRT+ +I++ V+ ++L F G V R C ++A +EF+D+ A
Sbjct: 6 EIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEEGAQAA 65
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L L+GT L +++ S +I
Sbjct: 66 LSLSGTMLGYYPVKVLPSKTAI 87
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 152 PLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYA 209
PL I + E RT+ + + + + ++L DFF VG V +R C + A
Sbjct: 156 PLGINDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGIA 215
Query: 210 LVEFSDQACVIPALKLNGTNLKG 232
VEF D V AL L+G L G
Sbjct: 216 YVEFKDPESVTLALGLSGQKLLG 238
>gi|312075541|ref|XP_003140463.1| RNA recognition domain-containing protein [Loa loa]
gi|307764379|gb|EFO23613.1| RNA recognition domain-containing protein [Loa loa]
Length = 359
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC--TRENDTNKYALVEFSDQA 217
K+ R T+ N+ VS EL+ F+ G V+++R +R ++ +A V F D A
Sbjct: 223 KRKYNCRTTVFVGNLPYDVSENELIAHFEMSGNVSFVRIVRDSRTGNSKGFAFVAFKDSA 282
Query: 218 CVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREI 259
V AL+L+G+ K + L+ T+ +QK ++ QR +
Sbjct: 283 AVPLALQLDGSIFKRRPLR----TKRVQKKNKVKSQTYQRSL 320
>gi|449438949|ref|XP_004137250.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
gi|449483120|ref|XP_004156498.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 306
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQK-VGTVNYIRFCTRENDTNKYALVEFSDQACVIP 221
E IRRT+ +I++ VS +EL F++ G VN R C + ++A VEF+++
Sbjct: 113 ESIRRTVYVSDIDKDVSEEELAKVFREFCGYVNDCRICGDPHSVLRFAFVEFANEHSARA 172
Query: 222 ALKLNGT 228
A+ L+GT
Sbjct: 173 AVGLSGT 179
>gi|226493542|ref|NP_001149104.1| RNA recognition motif containing protein [Zea mays]
gi|195624750|gb|ACG34205.1| RNA recognition motif containing protein [Zea mays]
Length = 283
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++ K V+V+N++ A + ++ F + G +E + + S S++ YV F D +
Sbjct: 1 MEVKTVKVSNLSLNALKREITEFFSFSGDIEYVEMQ------SESEWSQLAYVTFKDSQG 54
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPN 112
+ L+ +DRA+++TP + ++P LE Q G N
Sbjct: 55 ADTAVLLSGATIVDRAVIITPAENYQLP-----LEAHKQLSGAN 93
>gi|225455232|ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
gi|302143972|emb|CBI23077.3| unnamed protein product [Vitis vinifera]
Length = 361
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ E I+RT+ +I++ V+ ++L F G V R C N ++A VEF+D+
Sbjct: 169 QREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 228
Query: 220 IPALKLNGTNL 230
AL L GT L
Sbjct: 229 RAALSLAGTML 239
>gi|226529568|ref|NP_001148500.1| polyadenylate-binding protein 2 [Zea mays]
gi|195619834|gb|ACG31747.1| polyadenylate-binding protein 2 [Zea mays]
gi|413924473|gb|AFW64405.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL L
Sbjct: 86 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNL 145
Query: 226 NGTNLKGKTLQ 236
N + L G+ ++
Sbjct: 146 NESELHGRQIK 156
>gi|77551367|gb|ABA94164.1| RNA recognition motif, putative, expressed [Oryza sativa Japonica
Group]
Length = 290
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLN 226
RT+ NI S + + +FF G V Y+ RE++T++ A V F + AL L+
Sbjct: 101 RTIKVTNISMSATADNIKEFFSFSGEVEYVEM-RRESETSQVAYVTFKEFHGADTALLLS 159
Query: 227 GTNLKGKTLQMFHSTQSIQKPEA---KSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGI 283
G ++ ++ + + PEA + + + R EA VK+A+ ++S + +
Sbjct: 160 GASISEASVNITPVEDYVLPPEAYFYRQDTGSPRTPTEAA--VKKAEEVVSTMLAKGF-V 216
Query: 284 LSKD--KKKSHSPVRHLVIVLIVVDVA-LDLALEIGDDLEVVVRDVGHVR 330
LSKD K+ RH ++ VA LD + D DV H R
Sbjct: 217 LSKDALKRARSFDDRHQLLSTASARVASLDRRFGLSDKFS--AGDVAHAR 264
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 18/137 (13%)
Query: 166 RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVEFSDQACVIPA 222
++++ N+ +S + L FF G + +R R+ +TN + V+F++++ V A
Sbjct: 279 KKSIFIGNLLFDISEEALWSFFSDCGDITNVRVI-RDRNTNVGKGFGYVQFAERSSVSLA 337
Query: 223 LKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAIDPVIG 282
LKLN T+L+G+ +++ S ++ A+S + + E + R ++ N I V+G
Sbjct: 338 LKLNDTDLQGRQVRISRSNPTL----AESGNSTTKSTAEGL-RASKSDN-----IKRVMG 387
Query: 283 ILSKDKK----KSHSPV 295
+SK K +S +PV
Sbjct: 388 RVSKKIKTKSVRSKAPV 404
>gi|157131496|ref|XP_001662258.1| hypothetical protein AaeL_AAEL012119 [Aedes aegypti]
gi|108871511|gb|EAT35736.1| AAEL012119-PA [Aedes aegypti]
Length = 239
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
++++ T+ +I +S +EL DFF K G + R ++ YA + F+D A V A
Sbjct: 91 DDMKTTIFVGHINYQLSKKELDDFFCKAGEIQSSRIISKRG----YAFITFADAASVEEA 146
Query: 223 LKLNGTNLKGKTL 235
LKL+ L GK +
Sbjct: 147 LKLDKEMLAGKAV 159
>gi|398389564|ref|XP_003848243.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
gi|339468117|gb|EGP83219.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
Length = 199
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEFS+ V PAL
Sbjct: 74 RSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTPALV 133
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 134 LNDSTFRGRAIKV 146
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL L
Sbjct: 84 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNL 143
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 144 NESELHGRQIKV 155
>gi|413936733|gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]
Length = 228
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 145 HGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND 204
HG+ P T + K+ + R V N++ + +P+E+ F GTVN + T +
Sbjct: 102 HGMNSSNPNATTSENKEEMDSRSVFVG-NVDYACTPEEVQQHFNSCGTVNRVTILTDKFG 160
Query: 205 TNK-YALVEFSDQACVIPALKLNGTNLKGKTLQM 237
K +A VEF + V A+KLN + L G+ L++
Sbjct: 161 QPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKV 194
>gi|322699127|gb|EFY90891.1| pre-mRNA branch site protein p14 [Metarhizium acridum CQMa 102]
Length = 177
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ SV+P+EL D F K G + +R T A V + D QAC
Sbjct: 11 EVNRALFVKNLSYSVTPEELFDLFGKFGPIRQVRQGI-STSTKGTAFVVYEDVMDAKQAC 69
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + + K +K + A+RE
Sbjct: 70 D----KLNGFNFQNRYLVVLYHQPEKMMK--SKEDLEARRE 104
>gi|34365371|emb|CAE46007.1| hypothetical protein [Homo sapiens]
Length = 332
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 219 VIPALKLNGTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
+ AL L G NL ++L ++ H + P KS+ + +EIEEAM
Sbjct: 14 ALAALGLPGANLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSD-TSSKEIEEAMK 72
Query: 265 RVKEAQNMISAAIDP 279
RV+EAQ++ISAAI+P
Sbjct: 73 RVREAQSLISAAIEP 87
>gi|147818437|emb|CAN60729.1| hypothetical protein VITISV_013180 [Vitis vinifera]
Length = 642
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 157 YDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQ 216
+ ++ + IRRT+ +I++ V+ + L F G V R C + ++A VEF+D+
Sbjct: 340 FRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHSVLRFAFVEFADE 399
Query: 217 ACVIPALKLNGTNL 230
AL L GT L
Sbjct: 400 HGARAALNLGGTML 413
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|413924471|gb|AFW64403.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL L
Sbjct: 68 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNL 127
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 128 NESELHGRQIKV 139
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL L
Sbjct: 86 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEGVQEALNL 145
Query: 226 NGTNLKGKTLQ 236
N + L G+ ++
Sbjct: 146 NESELHGRQIK 156
>gi|195637520|gb|ACG38228.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL L
Sbjct: 68 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNL 127
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 128 NESELHGRQIKV 139
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|410919705|ref|XP_003973324.1| PREDICTED: msx2-interacting protein-like [Takifugu rubripes]
Length = 3242
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KL 225
RTL N+E++ S Q+L+D FQ+ G + I + N +YA V++SD A V A+ K+
Sbjct: 434 RTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDI-KKVNGVPQYAFVQYSDIASVCKAIKKM 492
Query: 226 NGTNLKGKTLQM 237
+G L L++
Sbjct: 493 DGEYLGSNRLKL 504
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL L
Sbjct: 90 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNL 149
Query: 226 NGTNLKGKTLQ 236
N + L G+ ++
Sbjct: 150 NESELHGRQIK 160
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL L
Sbjct: 84 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNL 143
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 144 NESELHGRQIKV 155
>gi|47229663|emb|CAG06859.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3147
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KL 225
RTL N+E++ S Q+L+D FQ+ G + I + N +YA V++SD A V A+ K+
Sbjct: 434 RTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDI-KKVNGVPQYAFVQYSDIASVCKAIKKM 492
Query: 226 NGTNLKGKTLQM 237
+G L L++
Sbjct: 493 DGEYLGSNRLKL 504
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ S SP+EL FQ G++N + +F + YA VEFS+ V
Sbjct: 61 RSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQ---PKGYAYVEFSEPQLVAQ 117
Query: 222 ALKLNGTNLKGKTLQM 237
AL LN + KG+ +++
Sbjct: 118 ALVLNDSVFKGRNIKV 133
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + +A VEF +Q V AL L
Sbjct: 45 RSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNL 104
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 105 NESELHGRQIKV 116
>gi|367041013|ref|XP_003650887.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
gi|346998148|gb|AEO64551.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
Length = 193
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+EL FQ G++N + + YA VEFS+ V AL
Sbjct: 68 RSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVAQALV 127
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 128 LNDSVFKGRNIKV 140
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT--NKYALVEFSDQACVI 220
E +RT+ + + + V P++L DFF VG V +R N A EF+D +CV
Sbjct: 43 ERDQRTVFVMQLSQRVRPKDLEDFFSSVGKVREVRLIADRNSRRHKGIAYCEFTDASCVP 102
Query: 221 PALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA 255
A+ L L G + +Q +A+ N AA
Sbjct: 103 MAIGLTNQKLLGVPI-------IVQASQAEKNRAA 130
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|408399464|gb|EKJ78565.1| hypothetical protein FPSE_01231 [Fusarium pseudograminearum CS3096]
Length = 173
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N+T A V + D QAC
Sbjct: 68 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGI-ANNTKGTAFVVYEDVTDAKQAC 126
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + K +K + A+RE
Sbjct: 127 D----KLNGFNFQNRYLVVLYHQPDKMAK--SKEDLEARRE 161
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|46107306|ref|XP_380712.1| hypothetical protein FG00536.1 [Gibberella zeae PH-1]
Length = 173
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N+T A V + D QAC
Sbjct: 68 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGI-ANNTKGTAFVVYEDVTDAKQAC 126
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + K +K + A+RE
Sbjct: 127 D----KLNGFNFQNRYLVVLYHQPDKMAK--SKEDLEARRE 161
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|358248311|ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycine max]
gi|255635956|gb|ACU18324.1| unknown [Glycine max]
Length = 197
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 163 EEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVI 220
EEI R++ N++ S +P+E+ FQ GTVN I T + K YA VEF + V
Sbjct: 62 EEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEVEAVQ 121
Query: 221 PALKLNGTNLKGKTLQ 236
AL LN + L G+ L+
Sbjct: 122 EALLLNESELHGRQLK 137
>gi|396080756|gb|AFN82377.1| RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 104
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
N++ SV+ ++ F+ G ++ I T +N T KYA+V+F+ + V +L NG+ LKG
Sbjct: 32 NLDASVTNSDIAAHFRSCGNISGINVITTKN-TRKYAIVDFTSEKSVEMSLLFNGSVLKG 90
Query: 233 KTL 235
K +
Sbjct: 91 KKI 93
>gi|348507513|ref|XP_003441300.1| PREDICTED: msx2-interacting protein-like [Oreochromis niloticus]
Length = 2916
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KL 225
RTL N+E++ S Q+L+D FQ+ G + I + N +YA V++SD A V A+ K+
Sbjct: 207 RTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDI-KKVNGVPQYAFVQYSDIASVCKAIKKM 265
Query: 226 NGTNLKGKTLQM 237
+G L L++
Sbjct: 266 DGEYLGANRLKL 277
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
GV + T + + PP P++ + KK E +R++ N++ + Q+L F
Sbjct: 55 GVSTRPCMQTTHSKMTAGAYTEGPPQPLSAEEKK-EIDKRSVYVGNVDYGSTAQDLEAHF 113
Query: 188 QKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
G++N I C + + K YA +EF+++ V A+ ++ T +G+T+++
Sbjct: 114 SSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTIKVL 166
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 27 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 86
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 87 NLNGREFSGRALRVDNAASEKNKEELKS 114
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|302829278|ref|XP_002946206.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
gi|300269021|gb|EFJ53201.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
Length = 242
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQ 216
D +K E R++ N++ +P+EL F + GTVN + T + + YA VEF +
Sbjct: 93 DVEKAEIDSRSIYVGNVDYGCTPEELQQHFAQCGTVNRVTILTDKFGNPKGYAYVEFLEV 152
Query: 217 ACVIPALKLNGTNLKGKTLQMFHSTQSI 244
V A+ L+ + L+G+ L++ ++
Sbjct: 153 DAVQNAVLLDNSELRGRQLKVLQKRTNV 180
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|322708822|gb|EFZ00399.1| pre-mRNA branch site protein p14 [Metarhizium anisopliae ARSEF 23]
Length = 116
Score = 42.7 bits (99), Expect = 0.29, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ SV+P+EL D F K G + +R T A V + D QAC
Sbjct: 11 EVNRALFVKNLSYSVTPEELFDLFGKFGPIRQVRQGI-STSTKGTAFVVYEDVMDAKQAC 69
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + + K +K + A+RE
Sbjct: 70 D----KLNGFNFQNRYLVVLYHQPEKMMK--SKEDLEARRE 104
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 128 GVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFF 187
GV + T + + PP P++ + KK E +R++ N++ + Q+L F
Sbjct: 55 GVSTRPCMQTTHSKMTAGAYTEGPPQPLSAEEKK-EIDKRSVYVGNVDYGSTAQDLEAHF 113
Query: 188 QKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
G++N I C + + K YA +EF+++ V A+ ++ T +G+T+++
Sbjct: 114 SSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTIKVL 166
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 28 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 87
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 88 NLNGREFSGRALRVDNAASEKNKEELKS 115
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|193683845|ref|XP_001950620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like
[Acyrthosiphon pisum]
Length = 533
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 131 PNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV 190
PN + D ++V PQ P T K+ +R N+ + V+ L + F+
Sbjct: 306 PNYKVWGCD-IIVDWADPQEEPDDETMSKVKVLYVR------NLTQEVTENRLKETFEVH 358
Query: 191 GTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KLNGTNLKGKTLQMFHSTQSIQKPEA 249
G+V ++ YA + F+D+ C + AL +LNG+NL G TL++ S+ KP
Sbjct: 359 GSVERVK------KIKDYAFIHFNDRGCALKALEELNGSNLDGATLEV-----SLAKP-- 405
Query: 250 KSNEAAQREIEEAMSR 265
S++ + EI A R
Sbjct: 406 PSDKKKKEEILRARER 421
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|432959160|ref|XP_004086189.1| PREDICTED: msx2-interacting protein-like [Oryzias latipes]
Length = 3173
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KL 225
RTL N+E++ S Q+L+D FQ+ G + I + N +YA V++SD A V A+ K+
Sbjct: 433 RTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDI-KKVNGVPQYAFVQYSDIASVCKAIKKM 491
Query: 226 NGTNLKGKTLQM 237
+G L L++
Sbjct: 492 DGEYLGSNRLKL 503
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|412993021|emb|CCO16554.1| predicted protein [Bathycoccus prasinos]
Length = 221
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 144 QHGLPQYPPLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE 202
Q G PQ P + + + +EI R++ ++ P L + F+K GTVN + T +
Sbjct: 54 QGGKPQKTPEELEKEKAERQEIDSRSVFVGQVDYGAEPGMLAEHFKKCGTVNRVTILTDK 113
Query: 203 NDTNK-YALVEFSDQACVIPALKLNGTNLK 231
+ K +A VEF ++ V A+ L+GT L+
Sbjct: 114 FENPKGFAYVEFLEKDAVDAAVLLDGTGLE 143
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|224114547|ref|XP_002316790.1| predicted protein [Populus trichocarpa]
gi|222859855|gb|EEE97402.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 157 YDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQ 216
Y ++ + IRRT+ +I++ V+ ++L F G V R C ++A VEF+ +
Sbjct: 113 YRAQREDSIRRTVYVSDIDQHVTEEQLAGLFSGCGQVVDCRICGDPRSVLRFAFVEFAVE 172
Query: 217 ACVIPALKLNGTNL 230
AL L GT L
Sbjct: 173 QGARAALNLGGTML 186
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|110737686|dbj|BAF00782.1| RNA-binding - like protein [Arabidopsis thaliana]
Length = 353
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
+K + IRRT+ +I++ V+ + L F G V R C N ++A +EF+++
Sbjct: 162 QKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGA 221
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL ++GT L L++ S +I
Sbjct: 222 RAALSMSGTVLGFYPLKVLPSKTAI 246
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|356556922|ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 296
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ I++ V+ + L F G V R C + ++A VEF+D+ A
Sbjct: 107 DSIRRTVYVSEIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTA 166
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 167 LNLGGTVL 174
>gi|388498836|gb|AFK37484.1| unknown [Lotus japonicus]
Length = 200
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQA 217
T + E R++ N++ S +P+E+ FQ GTVN + T + K YA VEF +
Sbjct: 63 TNREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVE 122
Query: 218 CVIPALKLNGTNLKGKTLQ 236
V AL LN + L G+ L+
Sbjct: 123 AVQEALALNESELHGRQLK 141
>gi|219519313|gb|AAI45163.1| Sfrs11 protein [Mus musculus]
Length = 376
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 114 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 172
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 173 ISAAIEP 179
>gi|15229132|ref|NP_190508.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|79314662|ref|NP_001030833.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|12324442|gb|AAG52182.1|AC012329_9 putative RNA-binding protein; 38450-35693 [Arabidopsis thaliana]
gi|6723409|emb|CAB66418.1| RNA-binding-like protein [Arabidopsis thaliana]
gi|222424104|dbj|BAH20012.1| AT3G49390 [Arabidopsis thaliana]
gi|332645014|gb|AEE78535.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|332645015|gb|AEE78536.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
Length = 353
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
+K + IRRT+ +I++ V+ + L F G V R C N ++A +EF+++
Sbjct: 162 QKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGA 221
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL ++GT L L++ S +I
Sbjct: 222 RAALSMSGTVLGFYPLKVLPSKTAI 246
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 6 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 65
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 66 NLNGREFSGRALRVDNAASEKNKEELKS 93
>gi|297819578|ref|XP_002877672.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
gi|297323510|gb|EFH53931.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
+K + IRRT+ +I++ V+ + L F G V R C N ++A +EF+++
Sbjct: 160 QKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGA 219
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL ++GT L L++ S +I
Sbjct: 220 RAALSMSGTVLGFYPLKVLPSKTAI 244
>gi|213402091|ref|XP_002171818.1| U2 snRNP-associated protein Sf3b14-like protein
[Schizosaccharomyces japonicus yFS275]
gi|211999865|gb|EEB05525.1| U2 snRNP-associated protein Sf3b14-like protein
[Schizosaccharomyces japonicus yFS275]
Length = 113
Score = 42.7 bits (99), Expect = 0.36, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 5 TVAPVKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFF 64
T+ P T+++ V N++ + TRD M LFG G++ +RL V+ + + Y
Sbjct: 4 TIGPEVTRILFVKNLSFKVTRDDMYELFGRFGQIRQIRL---GNAVNTKGTALVVYDTVA 60
Query: 65 DEKCVGISQHLTNTVFIDRALVVTPYNSGEIPDEQRA 101
D K L+ F+DR LVV ++ P++Q+A
Sbjct: 61 DAKLA--CDKLSGYNFMDRYLVVHYWS----PEKQKA 91
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 155 ITYDTKKIEEIR-----RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTREND 204
+ + T+++ E R R++ N++ S SP+E+ FQ G++N + +F +
Sbjct: 58 LDHQTQELSESRDDVDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQ--- 114
Query: 205 TNKYALVEFSDQACVIPALKLNGTNLKGKTLQM 237
YA VEF++ + V AL LN + KG+ +++
Sbjct: 115 PKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 147
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+EL FQ GT+N + C + K YA VEF+D + V A+
Sbjct: 96 RSIYVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMV 155
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 156 LNESLFRGRLIKI 168
>gi|403223382|dbj|BAM41513.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 150
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 158 DTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEFS 214
DT E++ RR++ N++ S PQEL +FF+ G +N I + + YA VEFS
Sbjct: 32 DTDTNEDVDRRSIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKWTGHPKGYAYVEFS 91
Query: 215 DQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ V A+ LN + K + +++ ++I
Sbjct: 92 SEDAVGNAVMLNDSLFKERIIKVIPKRKNI 121
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKY 208
PL I D EE RT+ + + + + ++L DFF VG V +R C +
Sbjct: 132 PLGIRNDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGI 191
Query: 209 ALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 192 AYVEFKDPESVTLALGLSGQKLLG 215
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|116780872|gb|ABK21856.1| unknown [Picea sitchensis]
Length = 215
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 146 GLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT 205
G Q P K E R++ N++ + +P+E+ FQ GTVN + T +
Sbjct: 68 GAVQDPAASAASQATKEEADTRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 127
Query: 206 NK-YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
K YA VEF + V A+ LN + L G+ L+
Sbjct: 128 PKGYAYVEFLEAEAVQNAILLNESELHGRQLK 159
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 50 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 109
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 110 NLNGREFSGRALRVDNAASEKNKEELKS 137
>gi|354478362|ref|XP_003501384.1| PREDICTED: serine/arginine-rich splicing factor 11-like [Cricetulus
griseus]
Length = 423
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 114 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 172
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 173 ISAAIEP 179
>gi|346978177|gb|EGY21629.1| pre-mRNA branch site protein p14 [Verticillium dahliae VdLs.17]
Length = 117
Score = 42.4 bits (98), Expect = 0.38, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N+T A V + D QAC
Sbjct: 11 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGI-ANNTKGTAFVVYEDVMDAKQAC 69
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L + + K + A+RE
Sbjct: 70 D----KLNGFNFQNRYLVVLYHQPEKMLNRTKEDLEARRE 105
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 146 GLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT 205
G Q P +K E R++ N++ + +P+E+ FQ GTVN + T +
Sbjct: 73 GAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 132
Query: 206 NK-YALVEFSDQACVIPALKLNGTNLKGKTLQM 237
K +A VEF + V AL LN T L G+ L++
Sbjct: 133 PKGFAYVEFVEADAVQNALILNETELHGRQLKV 165
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|342184931|emb|CCC94413.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 374
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ + L F + G + R+ D +Y ++F+ + A+K NG L G
Sbjct: 15 NIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFTLAG 74
Query: 233 KTLQMFHSTQSIQKPEAKSNEA 254
+ +++ S ++ +PE +N A
Sbjct: 75 RKIKVGISKGNVGRPEGYNNTA 96
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|358248658|ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
gi|255639113|gb|ACU19856.1| unknown [Glycine max]
Length = 296
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
+ IRRT+ I++ V+ + L F G V R C + ++A VEF+D+ A
Sbjct: 107 DSIRRTVYVSEIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTA 166
Query: 223 LKLNGTNL 230
L L GT L
Sbjct: 167 LNLGGTVL 174
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEFS+ + V AL
Sbjct: 68 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPSLVAQALV 127
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 128 LNESVFKGRNIKV 140
>gi|33469007|ref|NP_081265.1| splicing factor, arginine/serine-rich 11 isoform 3 [Mus musculus]
gi|26349207|dbj|BAC38243.1| unnamed protein product [Mus musculus]
gi|187953823|gb|AAI38146.1| Splicing factor, arginine/serine-rich 11 [Mus musculus]
Length = 423
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 15/67 (22%)
Query: 227 GTNLKGKTL--------------QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
GTNL ++L ++ H + P KS+ ++ +EIEEAM RV+EAQ++
Sbjct: 114 GTNLNSQSLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSS-KEIEEAMKRVREAQSL 172
Query: 273 ISAAIDP 279
ISAAI+P
Sbjct: 173 ISAAIEP 179
>gi|209880415|ref|XP_002141647.1| RNA recognition motif family protein [Cryptosporidium muris RN66]
gi|209557253|gb|EEA07298.1| RNA recognition motif family protein [Cryptosporidium muris RN66]
Length = 1154
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 74/148 (50%), Gaps = 18/148 (12%)
Query: 157 YDTKK---IEEIRRTLVAINIEESVSPQELVDFFQKVG-TVNYIRFCTRENDTNK-YALV 211
Y TKK ++ R + NI++S++ +L+ F+ + +N + C ++ +K Y +
Sbjct: 944 YKTKKKSTLQSYDRVIFVKNIDKSINEDDLMKHFESLDLMINRLIICKDKDGKSKGYGFI 1003
Query: 212 EFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEA------------AQREI 259
EFS+ + + A LNGT L ++ + +S + + P+ N+ ++R++
Sbjct: 1004 EFSNASDALTAHMLNGTKLGSTSITVNNSKRPLTIPQNSMNKTPKIINRIEPRSRSKRKV 1063
Query: 260 EEAMSRVKEAQNMISAAIDPVIGILSKD 287
E + +++ Q I +D V +L+K+
Sbjct: 1064 EFKSNWIEQIQTNI-KKVDEVDDLLNKE 1090
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG+V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|224106628|ref|XP_002333653.1| predicted protein [Populus trichocarpa]
gi|222837945|gb|EEE76310.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E +RRT+ +I++ V+ ++L F G V R C ++A +EF+D+ A
Sbjct: 6 EIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEEGAQAA 65
Query: 223 LKLNGTNL 230
L L+GT L
Sbjct: 66 LSLSGTML 73
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 146 GLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT 205
G Q P +K E R++ N++ + +P+E+ FQ GTVN + T +
Sbjct: 73 GAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 132
Query: 206 NK-YALVEFSDQACVIPALKLNGTNLKGKTLQM 237
K +A VEF + V AL LN T L G+ L++
Sbjct: 133 PKGFAYVEFVEADAVQNALILNETELHGRQLKV 165
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|297834768|ref|XP_002885266.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
lyrata]
gi|297331106|gb|EFH61525.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
lyrata]
Length = 564
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
+TL A N+ + ++ +FF++ G V +RF + ++ T K Y VEF+ AL+L
Sbjct: 313 KTLFAGNLSFQIKRSDIENFFKEAGEVVDVRFSSYDDGTFKGYGHVEFASPEEAQKALEL 372
Query: 226 NGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
NG L G+ +++ + + Q+ N R+ E + SR
Sbjct: 373 NGKMLLGRDVRLDLANERGQR-----NSNPGRKGEGSQSRT 408
>gi|224287039|gb|ACN41220.1| unknown [Picea sitchensis]
Length = 201
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 146 GLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT 205
G Q P K E R++ N++ + +P+E+ FQ GTVN + T +
Sbjct: 54 GAVQDPAASAASQATKEEADTRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 113
Query: 206 NK-YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
K YA VEF + V A+ LN + L G+ L+
Sbjct: 114 PKGYAYVEFLEAEAVQNAILLNESELHGRQLK 145
>gi|223945343|gb|ACN26755.1| unknown [Zea mays]
gi|414872458|tpg|DAA51015.1| TPA: putative RNA recognition motif containing family protein
[Zea mays]
Length = 283
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++ K V+V+N++ A + ++ F + G +E + + S S++ YV F D +
Sbjct: 1 MEVKTVKVSNLSLNALKREITEFFSFSGDIEYVEMQ------SESEWSQLAYVTFKDSQG 54
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDE 98
+ L+ +DRA+++TP + ++P E
Sbjct: 55 ADTAVLLSGATIVDRAVIITPAENYQLPPE 84
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE+ K Y E+ D+ + +++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETALSSMR 75
Query: 225 -LNGTNLKGKTLQMFHST 241
LNG L G+ L++ H+T
Sbjct: 76 NLNGRELHGRPLRVDHAT 93
>gi|409079019|gb|EKM79381.1| hypothetical protein AGABI1DRAFT_128535 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1026
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 152 PLPITYDTKKIEE--------IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE- 202
P +T D K+I E + TL N ES + +FF+K GT+ R+ +++
Sbjct: 671 PAALTKDKKRISEQEVGVHLAWKSTLYVTNFPESADDSYMRNFFEKYGTILETRWPSKKF 730
Query: 203 NDTNKYALVEFSDQACVIPALKLNGTNLK-GKTLQMFHSTQSIQKPEAKSNEAAQREI 259
T ++ V++ A AL+L+G L+ G + +F S +K E +A +REI
Sbjct: 731 KATRRFCYVQYISPAAAQAALELHGRELEPGLPVSVFISNPE-RKKERTDRDADEREI 787
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|341901268|gb|EGT57203.1| hypothetical protein CAEBREN_14800 [Caenorhabditis brenneri]
Length = 150
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE-NDTN-KYALVEFSDQACVIPALK 224
RT+ N E V+ L + F + G V +R R+ DTN ++AL+EF D+A V+ A++
Sbjct: 10 RTIYVANFAEEVTEDLLEELFTQTGPV--LRVIVRDVKDTNARFALIEFEDEASVLFAIE 67
Query: 225 L-NGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEE 261
L NG L K +Q+ ++ Q+ + A EIEE
Sbjct: 68 LMNGVKLFNKEIQVKPRNKTKQEELYRRKRA---EIEE 102
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|358248734|ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycine max]
gi|255647673|gb|ACU24298.1| unknown [Glycine max]
Length = 197
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 163 EEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVI 220
EEI R++ N++ S +P+E+ FQ GTVN + T + K YA VEF + V
Sbjct: 62 EEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQ 121
Query: 221 PALKLNGTNLKGKTLQ 236
AL LN + L G+ L+
Sbjct: 122 EALLLNESELHGRQLK 137
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|242033199|ref|XP_002463994.1| hypothetical protein SORBIDRAFT_01g010170 [Sorghum bicolor]
gi|241917848|gb|EER90992.1| hypothetical protein SORBIDRAFT_01g010170 [Sorghum bicolor]
Length = 283
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++ K V+V+N++ A + ++ F + G +E + + S S++ YV F D +
Sbjct: 1 MEVKTVKVSNLSLNALKREITEFFSFSGDIEYVEMQ------SESEWSQLAYVTFKDSQG 54
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDE 98
+ L+ +DRA+++TP + ++P E
Sbjct: 55 ADTAVLLSGATIVDRAVIITPAENYQLPPE 84
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 100 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 159
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 160 LNESVFKGRNIKV 172
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 100 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 159
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 160 LNESVFKGRNIKV 172
>gi|320589234|gb|EFX01696.1| pre-mRNA branch site protein [Grosmannia clavigera kw1407]
Length = 178
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL + F K G + +R N+T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFELFGKFGPIRQVRQGI-ANNTKGTAFVVYEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQK 246
KLNG N + + L ++H + + K
Sbjct: 69 D----KLNGYNFQNRYLVVLYHQPEKMAK 93
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 143 VQHGLPQYPPLPITYDT---KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVN----- 194
V+ P P + +D ++I+ RR++ N++ + EL +F G VN
Sbjct: 39 VERQFPYSPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIP 98
Query: 195 YIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQM 237
Y RF +A +EFSD+ V A+ L+ T +G+ +++
Sbjct: 99 YNRFT---GHPKGFAYIEFSDRESVRTAMALDETLFRGRVIKV 138
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 143 VQHGLPQYPPLPITYDT---KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVN----- 194
V+ P P + +D ++I+ RR++ N++ + EL +F G VN
Sbjct: 10 VERQFPYSPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIP 69
Query: 195 YIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQM 237
Y RF +A +EFSD+ V A+ L+ T +G+ +++
Sbjct: 70 YNRFT---GHPKGFAYIEFSDRESVRTAMALDETLFRGRVIKV 109
>gi|449451417|ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACV 219
K E R++ N++ + +P+E+ FQ GTVN + T + +A VEF + +
Sbjct: 77 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAI 136
Query: 220 IPALKLNGTNLKGKTLQ 236
AL LN T L G+ L+
Sbjct: 137 QEALLLNETELHGRQLK 153
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ + SP+E+ FQ G++N + + YA VEF++ A V AL
Sbjct: 67 RSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPASVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 127 LNESLFRGRNLKV 139
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 79 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 138
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 139 LNESVFKGRNIKV 151
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|342877370|gb|EGU78838.1| hypothetical protein FOXB_10660 [Fusarium oxysporum Fo5176]
Length = 177
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N+T A V + D QAC
Sbjct: 72 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGI-ANNTKGTAFVVYEDVADAKQAC 130
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + K +K + A+RE
Sbjct: 131 D----KLNGFNFQNRYLVVLYHQPDKMAK--SKEDLEARRE 165
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 3 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 62
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 63 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 102
>gi|395508493|ref|XP_003758545.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Sarcophilus
harrisii]
Length = 384
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 143 VQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTR 201
+HG+P +P PI +K+E R++ N++ S + +EL F G +N + C +
Sbjct: 150 TEHGIP-FPGTPI----EKLEADHRSVYVGNVDYSGTAEELESHFNCCGEINRVTILCDK 204
Query: 202 ENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
+ K YA +EF+ + V A+ L+ T +G+ +++
Sbjct: 205 YSGHPKGYAYIEFAYKDSVKTAMDLDETTFRGRIIKVL 242
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACV 219
K E R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V
Sbjct: 84 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAV 143
Query: 220 IPALKLNGTNLKGKTLQ 236
AL LN + L G+ L+
Sbjct: 144 QEALALNESELHGRQLK 160
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|326678004|ref|XP_002666145.2| PREDICTED: msx2-interacting protein [Danio rerio]
Length = 3138
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KL 225
RTL N+E++ + Q+L+D FQ+ G + I R N +YA V++SD A V A+ K+
Sbjct: 442 RTLFIGNLEKTTNYQQLLDVFQRFGEIVDIDI-KRVNGVPQYAFVQYSDIASVCKAIKKM 500
Query: 226 NGTNLKGKTLQM 237
+G L L++
Sbjct: 501 DGEYLGTNRLKL 512
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 151 PPLPITY-DTKKIEEIR------RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTR 201
PP + Y D +EE+ RT+ + + + + ++L +FF VG V +R C +
Sbjct: 168 PPNGVRYRDGSPLEELSPEERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNK 227
Query: 202 ENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
A +EF D V AL L+G L G + + H+
Sbjct: 228 TKRFKGIAYIEFRDPESVALALGLSGQRLLGIPISVQHT 266
>gi|340522452|gb|EGR52685.1| predicted protein [Trichoderma reesei QM6a]
Length = 116
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N+T A V + D QAC
Sbjct: 11 EVNRALFVKNLSYTVTPEELFDLFGKFGPIRQVRQGI-ANNTKGTAFVVYEDVMDAKQAC 69
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + K +K + A+RE
Sbjct: 70 D----KLNGFNFQNRYLVVLYHQPDKMVK--SKEDLDARRE 104
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|209877356|ref|XP_002140120.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555726|gb|EEA05771.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 206
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKYALVEFSDQACVI 220
+EI+R++ N++ P EL + F+ G++N I R +A +EF + V
Sbjct: 62 DEIKRSIYIGNVDYGTKPTELQELFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVD 121
Query: 221 PALKLNGTNLKGKTLQMFHSTQSI 244
ALK +G +G+ +++ ++I
Sbjct: 122 TALKFDGAMFRGRQIKVCSKRKNI 145
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 89 NLNGREFSGRALRVDNAASEKNKEELKS 116
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 2 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 61
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 62 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 101
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 150 YPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNK 207
+ PL I + E RT+ + + + + ++L +FF VG V +R C +
Sbjct: 152 HSPLGINDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKG 211
Query: 208 YALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 212 IAYVEFKDPESVTLALGLSGQKLLG 236
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|408396974|gb|EKJ76125.1| hypothetical protein FPSE_03600 [Fusarium pseudograminearum CS3096]
Length = 207
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+++ FQ G++N + + YA VEF++ + V AL
Sbjct: 83 RSIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 142
Query: 225 LNGTNLKGKTLQ 236
LN + KG++++
Sbjct: 143 LNESMFKGRSIK 154
>gi|302922980|ref|XP_003053579.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734520|gb|EEU47866.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 116
Score = 42.0 bits (97), Expect = 0.56, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 11 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASN-TKGTAFVVYEDVMDAKQAC 69
Query: 219 VIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L + + Q + +K + A+RE
Sbjct: 70 D----KLNGFNFQNRYLVVLYH-QPDKMARSKEDLEARRE 104
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 150 YPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNK 207
+ PL I + E RT+ + + + + ++L +FF VG V +R C +
Sbjct: 153 HSPLGINDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKG 212
Query: 208 YALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 213 IAYVEFKDPESVTLALGLSGQKLLG 237
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1]
Length = 208
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ S SP+++ FQ G++N + +F + YA VEF++ + V
Sbjct: 84 RSIFVGNVDYSASPEDIQGHFQSCGSINRVTILLDKFTGQ---PKGYAYVEFTEPSLVAQ 140
Query: 222 ALKLNGTNLKGKTLQ 236
AL LN + KG++++
Sbjct: 141 ALVLNESMFKGRSIK 155
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 89 NLNGREFSGRALRVDNAASEKNKEELKS 116
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 162 IEEIRR---TLVAINIEESVSPQELVDFFQK-VGTVNYIRFCTRENDTNKY---ALVEFS 214
IEE +R T++ IN+ S +++ + F + G V I+ C R+ + K A VEF
Sbjct: 163 IEEAQRADLTVLVINLSLSADERDIYELFSEHAGKVRDIQ-CVRDLRSGKSKGIAYVEFY 221
Query: 215 DQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
Q VI AL + G +LKG+ ++ IQ +A+ N AA+
Sbjct: 222 TQESVIKALSMTGLDLKGQRIK-------IQSSQAEKNRAAK 256
>gi|302803015|ref|XP_002983261.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
gi|300148946|gb|EFJ15603.1| hypothetical protein SELMODRAFT_117870 [Selaginella moellendorffii]
Length = 219
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACV 219
K E R++ N++ S +P+E+ FQ GTVN + T + K YA VEF + V
Sbjct: 85 KEEADARSVYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEGEAV 144
Query: 220 IPALKLNGTNLKGKTLQ 236
A+ LN + L G+ L+
Sbjct: 145 QNAILLNESELHGRPLK 161
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|346326841|gb|EGX96437.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 201
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ S SP+E+ FQ G++N + +F + YA VEF++ + V
Sbjct: 77 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFSGQ---PKGYAYVEFTEPSLVAQ 133
Query: 222 ALKLNGTNLKGKTLQM 237
AL LN + KG+ +++
Sbjct: 134 ALVLNESVFKGRNIKV 149
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 81 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 140
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 141 LNESVFKGRNIKV 153
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|384245723|gb|EIE19216.1| hypothetical protein COCSUDRAFT_38408 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 174 IEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGK 233
+ V+ L D F+ G + R C N ++A +EF+D+ V A+KLNG L
Sbjct: 28 FHQKVTEASLADVFKDSGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAKLGKY 87
Query: 234 TLQMFHSTQSI 244
+++ S +I
Sbjct: 88 PIRVMPSKTAI 98
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 24 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 83
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 84 NLNGREFSGRALRVDNAASEKNKEELKS 111
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|224060413|ref|XP_002300187.1| predicted protein [Populus trichocarpa]
gi|222847445|gb|EEE84992.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GT+N I + + YA VEF + V AL L
Sbjct: 71 RSVFVGNVDYSCTPEEVQQHFQACGTINRITIRSDKYGQPKGYAYVEFLEPETVQEALLL 130
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 131 NESELHGRQLK 141
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 153 LPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YAL 210
LP+ DT +R V NI + ++L D F +VG V R RE K Y
Sbjct: 4 LPV-RDTAVDRSLRSVFVG-NIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 61
Query: 211 VEFSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
E+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 62 CEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 73 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALI 132
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 133 LNESVFKGRNIKV 145
>gi|401825099|ref|XP_003886645.1| putative RNA-binding protein [Encephalitozoon hellem ATCC 50504]
gi|395459790|gb|AFM97664.1| putative RNA-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 104
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
N++ SV+ ++ F+ G ++ I T +N T KYA+V+F+ + V +L NG+ LKG
Sbjct: 32 NLDASVTNSDIAAHFRSCGNISGINVITVKN-TRKYAVVDFTSEKSVEMSLLFNGSVLKG 90
Query: 233 KTL 235
K +
Sbjct: 91 KKI 93
>gi|302755738|ref|XP_002961293.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
gi|300172232|gb|EFJ38832.1| hypothetical protein SELMODRAFT_74095 [Selaginella moellendorffii]
Length = 221
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GTVN + T + K YA VEF + V A+ L
Sbjct: 93 RSVYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEGEAVQNAILL 152
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 153 NESELHGRPLK 163
>gi|224032221|gb|ACN35186.1| unknown [Zea mays]
gi|414585668|tpg|DAA36239.1| TPA: putative RNA recognition motif containing family protein
[Zea mays]
Length = 310
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGIS 72
V+V+N++ +A + ++ F + G + + + S S++ Y+ F D++ +
Sbjct: 4 TVKVSNVSLKAAQRDIKEFFSFSGDIVHVEMQ------SFDELSQVAYITFKDKQGAETA 57
Query: 73 QHLTNTVFIDRALVVTPYNSGEIP 96
LT +D A++VTP N E+P
Sbjct: 58 MLLTGATIVDMAVIVTPANDYELP 81
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 145 HGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRE 202
+G + PP ++ + E RT+ I + + V ++L +FF VG V +R C +
Sbjct: 218 NGADRTPPTELSPE----ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKT 273
Query: 203 NDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
A +EF D V AL L+G L G + + H+
Sbjct: 274 KRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHT 311
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|226492154|ref|NP_001149149.1| nucleic acid binding protein [Zea mays]
gi|195625094|gb|ACG34377.1| nucleic acid binding protein [Zea mays]
gi|223943535|gb|ACN25851.1| unknown [Zea mays]
gi|414585665|tpg|DAA36236.1| TPA: putative RNA recognition motif containing family protein
[Zea mays]
Length = 314
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGIS 72
V+V+N++ +A + ++ F + G + + + S S++ Y+ F D++ +
Sbjct: 8 TVKVSNVSLKAAQRDIKEFFSFSGDIVHVEMQ------SFDELSQVAYITFKDKQGAETA 61
Query: 73 QHLTNTVFIDRALVVTPYNSGEIP 96
LT +D A++VTP N E+P
Sbjct: 62 MLLTGATIVDMAVIVTPANDYELP 85
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 24 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 83
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 84 NLNGREFSGRALRVDNAASEKNKEELKS 111
>gi|380096344|emb|CCC06392.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 115
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASN-TKGTAFVVYEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEAMSR 265
KLNG N + + L ++H + K K + A++E E + R
Sbjct: 69 D----KLNGYNFQNRYLVVLYHQPDKLNK--TKEDLDARKENLERIKR 110
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 81 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 140
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 141 LNESVFKGRNIKV 153
>gi|405118694|gb|AFR93468.1| poly(A) binding protein [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+E+ FQ GT+N + C + K YA VEF++ + V AL
Sbjct: 84 RSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALV 143
Query: 225 LNGTNLKGKTLQ 236
LN + KG+ LQ
Sbjct: 144 LNESMFKGRMLQ 155
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 148 PQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN- 206
PQ P D++K+E +L ++ +VS L D F +G+V+ IR C R+ T
Sbjct: 21 PQTAPTSTDSDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVC-RDAITKT 79
Query: 207 --KYALVEFSDQACVIPAL-KLNGTNLKGKTLQMFHS 240
YA V F+D A+ KLN T +KG+ ++ S
Sbjct: 80 SLGYAYVNFNDYEAGRQAIEKLNYTPIKGQPCRIMWS 116
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 26 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 85
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 86 NLNGREFSGRALRVDNAASEKNKEELKS 113
>gi|358398756|gb|EHK48107.1| hypothetical protein TRIATDRAFT_155183 [Trichoderma atroviride IMI
206040]
Length = 116
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N+T A V + D QAC
Sbjct: 11 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGI-ANNTKGTAFVVYEDVMDAKQAC 69
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + K +K + A+RE
Sbjct: 70 D----KLNGFNFQNRYLVVLYHQPDKMVK--SKEDLDARRE 104
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|302830029|ref|XP_002946581.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
gi|300268327|gb|EFJ52508.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
Length = 238
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E I+RT+ ++ +++ + L FF G + R C N ++A +EF+D A
Sbjct: 13 ENIKRTVYISYVDCTLTEENLAAFFSDCGRIVDCRICGDPNSAMRFAFIEFADVEFATKA 72
Query: 223 LKLNGTNLKGKTLQMFHSTQSI 244
L+ G+ L L++ S +I
Sbjct: 73 LEKTGSVLGKSPLRVLPSKTAI 94
>gi|443895148|dbj|GAC72494.1| splicing factor RNPS1, partial [Pseudozyma antarctica T-34]
Length = 160
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+EL FQ GT+N + C + K YA VEF+D + V A+
Sbjct: 92 RSIYVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMV 151
Query: 225 LNGTNLKGK 233
LN + +G+
Sbjct: 152 LNESLFRGR 160
>gi|71034173|ref|XP_766728.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353685|gb|EAN34445.1| hypothetical protein TP01_1207 [Theileria parva]
Length = 543
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK-LNG 227
+ N+++SVS Q+L DF ++ G V+Y + + ++ L+E++++ V A+K LNG
Sbjct: 446 ITVSNLDQSVSWQDLKDFGRQAGDVHYTSIIIKGD--RRFGLIEYTNEESVQNAMKELNG 503
Query: 228 TNLKGKTLQMFH 239
+ TL++ H
Sbjct: 504 KKIVDNTLELTH 515
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVE 212
+T ++ R++ NI + ++L D F +VG V R RE K Y E
Sbjct: 4 LTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCE 63
Query: 213 FSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ DQ + A++ LNG G+ L++ ++ K E KS
Sbjct: 64 YQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 145 HGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRE 202
+G + PP ++ + E RT+ I + + V ++L +FF VG V +R C +
Sbjct: 215 NGADRTPPTELSPE----ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKT 270
Query: 203 NDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
A +EF D V AL L+G L G + + H+
Sbjct: 271 KRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHT 308
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 86 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 145
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 146 LNESVFKGRNIKV 158
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 86 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 145
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 146 LNESVFKGRNIKV 158
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 73 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALI 132
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 133 LNESVFKGRNIKV 145
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT+ + + + P+++ +FF VG V +R + N + A VEF D+ V AL
Sbjct: 47 RTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQDKNSVPLALG 106
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
L+G L + +Q +A+ N AAQ
Sbjct: 107 LSGQKLLSIPIM-------VQASQAEKNRAAQ 131
>gi|224146020|ref|XP_002325850.1| predicted protein [Populus trichocarpa]
gi|222862725|gb|EEF00232.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 6 VAPVKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFD 65
V ++T+ V+V N++ A+ ++ F + G++E + I R+ QS+ +V F D
Sbjct: 3 VTAMQTRTVEVRNVSDLASEREVHEFFSFSGEIEHIH---IQRENG---QSKTAFVTFKD 56
Query: 66 EKCVGISQHLTNTVFIDRALVVTP 89
K + I+ L+ +DR + +TP
Sbjct: 57 PKALEIALLLSGATLVDRIVTITP 80
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 41.6 bits (96), Expect = 0.73, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRF-CTRENDTNK-YALVEFSDQACVIPAL-KLNGTN 229
N + QEL D+F VG V +R C RE + +A VEF+D+A A +LNG +
Sbjct: 12 NATYQTTEQELGDYFSTVGQVTNVRIVCDRETGRPRGFAFVEFADEAGAQRACDQLNGVD 71
Query: 230 LKGKTLQMFHSTQ 242
G+ L++ +T+
Sbjct: 72 FNGRQLRVNLATR 84
>gi|255555781|ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
gi|223541913|gb|EEF43459.1| RNA-binding protein, putative [Ricinus communis]
Length = 379
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQAC 218
++ E IRRT+ +I++ V+ ++L F G V R C N ++A +EF+ +
Sbjct: 186 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEG 245
Query: 219 VIPALKLNGT 228
AL L GT
Sbjct: 246 ARAALNLAGT 255
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 18/112 (16%)
Query: 147 LPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND-- 204
LP PP E RT+ + + + P+++ +FF VG V +R + N
Sbjct: 148 LPDLPPE---------ERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRR 198
Query: 205 TNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
+ A VEF D+ V AL L+G L + +Q +A+ N AAQ
Sbjct: 199 SKGIAYVEFQDKNSVPLALGLSGQKLLSIPIM-------VQASQAEKNRAAQ 243
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 90 RSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEALAL 149
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 150 NESELHGRQLK 160
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ S SP+E+ FQ G++N + +F + YA VEF++ + V
Sbjct: 91 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQ---PKGYAYVEFTEPSLVAQ 147
Query: 222 ALKLNGTNLKGKTLQM 237
AL LN + KG+ +++
Sbjct: 148 ALVLNESIFKGRNIKV 163
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 70 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEADAVQNALIL 129
Query: 226 NGTNLKGKTLQM 237
N T L G+ L++
Sbjct: 130 NETELHGRQLKV 141
>gi|224140775|ref|XP_002323754.1| predicted protein [Populus trichocarpa]
gi|222866756|gb|EEF03887.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 144 QHGLPQYPPLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-R 201
+ G Q P T EE+ R++ N++ + +P+E+ FQ GTVN + + +
Sbjct: 47 EMGSVQDPSASATASQANKEEVDSRSVFVGNVDYACTPEEVQQHFQACGTVNRVTIRSDK 106
Query: 202 ENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQ 236
YA VEF + V AL LN + L G+ L+
Sbjct: 107 YGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLK 141
>gi|164427672|ref|XP_964127.2| hypothetical protein NCU02837 [Neurospora crassa OR74A]
gi|157071838|gb|EAA34891.2| conserved hypothetical protein [Neurospora crassa OR74A]
gi|336463638|gb|EGO51878.1| hypothetical protein NEUTE1DRAFT_89652 [Neurospora tetrasperma FGSC
2508]
gi|350294965|gb|EGZ76029.1| hypothetical protein NEUTE2DRAFT_97428 [Neurospora tetrasperma FGSC
2509]
Length = 115
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASN-TKGTAFVVYEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEAMSR 265
KLNG N + + L ++H + K K + A++E E + R
Sbjct: 69 D----KLNGYNFQNRYLVVLYHQPDKMNK--TKEDLDARKENLERIKR 110
>gi|125545498|gb|EAY91637.1| hypothetical protein OsI_13273 [Oryza sativa Indica Group]
gi|125587696|gb|EAZ28360.1| hypothetical protein OsJ_12338 [Oryza sativa Japonica Group]
Length = 305
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
+ V+V+NI+ A++ ++ F + G +E + + S +S++ YV F D +
Sbjct: 25 RTVKVSNISLNASKREITEFFSFSGDIEYVEMQ------SESERSQLAYVTFKDSQGADT 78
Query: 72 SQHLTNTVFIDRALVVTPYNSGEIPDEQR 100
+ L+ +DR++++TP + ++P + R
Sbjct: 79 AVLLSGATIVDRSVIITPVVNYQLPPDAR 107
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACV 219
K E R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V
Sbjct: 81 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAV 140
Query: 220 IPALKLNGTNLKGKTLQ 236
AL LN + L G+ L+
Sbjct: 141 QEALLLNESELHGRQLK 157
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
RT+ A N+ +E+ FF K G +N I+ T + + +A +EF + VI AL
Sbjct: 139 RTVFAYNLPLRAEEKEIFQFFIKAGPLNDIKVITDKTTGRSKGFAYIEFQRKEDVINALA 198
Query: 225 LNGTNLKGKT--LQMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
L G L G+ ++M + +++ A+ + Q+E+E +
Sbjct: 199 LTGQVLMGQAVMVKMSEAEKNLAWEAAEQAKRQQKELERELG 240
>gi|242092470|ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
gi|241914948|gb|EER88092.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
Length = 203
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 23/121 (19%)
Query: 117 KLPAHVTNQIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEE 176
++ A V +++GV PN S + K E R++ N++
Sbjct: 53 EMQAKVAKEMQGVDPNATTSEN----------------------KEEMDSRSVFVGNVDY 90
Query: 177 SVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTL 235
+ +P+E+ F GTVN + T + K +A VEF + V A+KLN + L G+ L
Sbjct: 91 ACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAVKLNESELHGRQL 150
Query: 236 Q 236
+
Sbjct: 151 K 151
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|400601143|gb|EJP68786.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 194
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ S SP+E+ FQ G++N + +F + YA VEF++ + V
Sbjct: 71 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFSGQ---PKGYAYVEFTEPSLVAQ 127
Query: 222 ALKLNGTNLKGKTLQM 237
AL LN + KG+ +++
Sbjct: 128 ALVLNESVFKGRNIKV 143
>gi|340057933|emb|CCC52286.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 371
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ + L F + GT+ R+ D +Y ++F+ + A+K NG L G
Sbjct: 15 NIDRSVTLEVLRQVFSQCGTIVDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFTLAG 74
Query: 233 KTLQMFHSTQSIQKPEA 249
+ +++ S ++ +PE
Sbjct: 75 RKIKVGISKGNVGRPEG 91
>gi|194706900|gb|ACF87534.1| unknown [Zea mays]
gi|195622774|gb|ACG33217.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 23/121 (19%)
Query: 117 KLPAHVTNQIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEE 176
++ A V +++GV PN S + K E R++ N++
Sbjct: 53 EMQAKVAKEMQGVDPNATTSEN----------------------KEEMDSRSVFIGNVDY 90
Query: 177 SVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTL 235
+ +P+E+ F GTVN + T + K +A VEF + V A+KLN + L G+ L
Sbjct: 91 ACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQL 150
Query: 236 Q 236
+
Sbjct: 151 K 151
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 89 NLNGREFSGRALRVDNAASEKNKEELKS 116
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|409080136|gb|EKM80497.1| hypothetical protein AGABI1DRAFT_100088 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 343
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+E+ FQ GT+N + C + K YA VEF++ V AL
Sbjct: 81 RSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDAALS 140
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSNE 253
++ + +G+ +++ + PE + E
Sbjct: 141 MDNSLFRGRLIKVRRDQEDAVAPEEDTGE 169
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|342185222|emb|CCC94705.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 462
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLN 226
RT+ ++ S+ + ++ G+VN +R C + +A VE +D V+ AL+L
Sbjct: 347 RTVYISHLPASLPQRTFMEMLNSCGSVNKVRVCRGKGYATLFAFVEMADSEGVVAALRLG 406
Query: 227 GTNLKGKTLQMFHSTQSIQ--KPE 248
+N+ G +++ + IQ +PE
Sbjct: 407 KSNIFGHNIRLQMARNPIQDSQPE 430
>gi|242035047|ref|XP_002464918.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
gi|241918772|gb|EER91916.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
Length = 209
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + SP+E+ FQ GT+N + T K +A VEF + V AL L
Sbjct: 94 RSIYVGNVDYACSPEEVQQHFQFCGTINRVTILTDSFGQPKGFAYVEFDEVEAVQNALLL 153
Query: 226 NGTNLKGKTLQM 237
N T L G+ L++
Sbjct: 154 NETELHGRPLKV 165
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEFS+ + V AL
Sbjct: 66 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 126 LNESLFRGRNLKV 138
>gi|71026927|ref|XP_763107.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350060|gb|EAN30824.1| RNA binding protein, putative [Theileria parva]
Length = 151
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 158 DTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEFS 214
DT E++ +R++ N++ S PQEL +FF+ G +N I + + YA VEFS
Sbjct: 32 DTDNHEDVDKRSIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFS 91
Query: 215 DQACVIPALKLNGTNLKGKTLQ 236
++ V A+ LN + K + ++
Sbjct: 92 NEDAVNNAIMLNESLFKERIIK 113
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +V+PQEL FQ G +N I C + K YA +EFS++ V A+
Sbjct: 79 RSVYVGNVDYAVTPQELQAHFQSCGPINRITILCDKFTGHPKGYAYIEFSEEDAVGNAVL 138
Query: 225 LNGTNLKGKTLQM 237
LN T + G+ +++
Sbjct: 139 LNDTVVHGRQIKV 151
>gi|384248219|gb|EIE21704.1| hypothetical protein COCSUDRAFT_56895 [Coccomyxa subellipsoidea
C-169]
Length = 231
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 166 RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKL 225
R+ + +V+ L D F+ G + R C N ++A +EF+D+ + A+KL
Sbjct: 51 RKAALQKQFGGNVTEAALADVFKHSGKIVDCRVCGDPNSAMRFAFIEFADEEAIQRAIKL 110
Query: 226 NGTNL 230
NGT L
Sbjct: 111 NGTML 115
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-Y 208
PP P++ + KK E +R++ N++ + Q+L F G++N I C + + K Y
Sbjct: 78 PPRPLSAEEKK-EIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGY 136
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
A +EF+++ V A+ ++ T +G+T+++
Sbjct: 137 AYIEFAERNSVDAAVTMDETVFRGRTIKVL 166
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 89 NLNGREFSGRALRVDNAASEKNKEELKS 116
>gi|400595349|gb|EJP63154.1| pre-mRNA branch site protein p14 [Beauveria bassiana ARSEF 2860]
Length = 169
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 16/111 (14%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R + T A V + D QAC
Sbjct: 11 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGI-ASATKGTAFVVYEDVIDAKQAC 69
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKE 268
KLNG N + + L ++H + K +K + A+R E+++R+K+
Sbjct: 70 D----KLNGFNFQNRYLVVLYHQPDKMAK--SKEDLEARR---ESLARLKK 111
>gi|393246337|gb|EJD53846.1| RNA-binding domain-containing protein, partial [Auricularia
delicata TFB-10046 SS5]
Length = 170
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ GT+N + C + K YA VEF++ A V A+
Sbjct: 49 RSVYVGNVDYSASPEEIQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPAFVQHAMV 108
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 109 LNESLFRGRLIKV 121
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 146 GLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT 205
G Q P K E R++ N++ + +P+E+ FQ GTVN + T +
Sbjct: 72 GSVQDPANAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 131
Query: 206 NK-YALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
K +A VEF + V AL LN + L G+ L++
Sbjct: 132 PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVL 165
>gi|171696206|ref|XP_001913027.1| hypothetical protein [Podospora anserina S mat+]
gi|170948345|emb|CAP60509.1| unnamed protein product [Podospora anserina S mat+]
Length = 191
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASN-TKGTAFVVYEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL 235
KLNG N + + L
Sbjct: 69 D----KLNGYNFQNRYL 81
>gi|115454945|ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group]
gi|18071362|gb|AAL58221.1|AC090882_24 putative splicing regulatory protein [Oryza sativa Japonica Group]
gi|108710741|gb|ABF98536.1| RRM-containing protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113549544|dbj|BAF12987.1| Os03g0713600 [Oryza sativa Japonica Group]
Length = 284
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++ + V+V+NI+ A++ ++ F + G +E + + S +S++ YV F D +
Sbjct: 1 MEVRTVKVSNISLNASKREITEFFSFSGDIEYVEMQ------SESERSQLAYVTFKDSQG 54
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQR 100
+ L+ +DR++++TP + ++P + R
Sbjct: 55 ADTAVLLSGATIVDRSVIITPVVNYQLPPDAR 86
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALV 211
P+ + +K R++ N++ S +P+E+ FQ GT+N + C + K YA V
Sbjct: 64 PMETEEEKAATDSRSIYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYV 123
Query: 212 EFSDQACVIPALKLNGTNLKGKTLQM 237
EFS+ V AL ++ + +G+ +++
Sbjct: 124 EFSETEHVDAALSMDNSLFRGRLIKV 149
>gi|157867749|ref|XP_001682428.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68125882|emb|CAJ03486.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 409
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ L F + GT+ RE D ++ ++F+ + A+K NG L G
Sbjct: 16 NIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKYNGFTLVG 75
Query: 233 KTLQMFHSTQSIQKPE--AKSNEAA 255
+ L++ S ++ KPE A N A
Sbjct: 76 RKLKVGVSKGNVNKPEGYATGNGAG 100
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACV 219
K E R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V
Sbjct: 81 KEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAV 140
Query: 220 IPALKLNGTNLKGKTLQ 236
AL LN + L G+ L+
Sbjct: 141 QEALLLNESELHGRQLK 157
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEFS+ + V AL
Sbjct: 66 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQ 236
LN + +G+ L+
Sbjct: 126 LNESLFRGRNLK 137
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACV 219
K E R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V
Sbjct: 80 KEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAV 139
Query: 220 IPALKLNGTNLKGKTLQ 236
AL LN + L G+ L+
Sbjct: 140 QEALVLNESELHGRQLK 156
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACV 219
K E R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V
Sbjct: 80 KEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAV 139
Query: 220 IPALKLNGTNLKGKTLQ 236
AL LN + L G+ L+
Sbjct: 140 QEALVLNESELHGRQLK 156
>gi|321248626|ref|XP_003191185.1| poly(A) binding protein [Cryptococcus gattii WM276]
gi|317457652|gb|ADV19398.1| Poly(A) binding protein, putative [Cryptococcus gattii WM276]
Length = 217
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+E+ FQ GT+N + C + K YA VEF++ + V AL
Sbjct: 100 RSVFIGNVDYGATPEEIQGHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALV 159
Query: 225 LNGTNLKGKTLQ 236
LN + +G+ LQ
Sbjct: 160 LNESMFRGRMLQ 171
>gi|330932205|ref|XP_003303690.1| hypothetical protein PTT_16008 [Pyrenophora teres f. teres 0-1]
gi|311320146|gb|EFQ88215.1| hypothetical protein PTT_16008 [Pyrenophora teres f. teres 0-1]
Length = 149
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 148 PQYPPLPITYDTKKIE-------EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT 200
P P + Y + + E+ R L N+ +V+P EL D F K G V IR
Sbjct: 21 PSSPSFTVHYSRQSMSRGGKLAPEVNRALFVKNLSFNVTPAELFDLFGKFGPVRQIRQGI 80
Query: 201 RENDTNKYALVEFSDQACVIPAL-KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
N+T A V + D A KLNG N + + L ++H + K A S+ A ++E
Sbjct: 81 -ANNTKGTAFVVYEDVMDAKSACDKLNGFNFQNRYLVVLYHQPDKMLK--AASDLAERQE 137
Query: 259 IEEAMSR 265
E + +
Sbjct: 138 NLEKLKK 144
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 267 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 326
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 327 LSGQRLLGVPIMVQHT 342
>gi|125534713|gb|EAY81261.1| hypothetical protein OsI_36439 [Oryza sativa Indica Group]
Length = 323
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 11/187 (5%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLN 226
RT+ NI S + + +FF G V Y+ RE++T++ A V F + AL L+
Sbjct: 49 RTIKVTNISMSATADNIKEFFSFSGEVEYVE-MRRESETSQVAYVTFKEFHGADTALLLS 107
Query: 227 GTNLKGKTLQMFHSTQSIQKPEA---KSNEAAQREIEEAMSRVKEAQNMISAAIDPVIGI 283
G ++ ++ + + PEA + + + R EA VK+A+ ++S + +
Sbjct: 108 GASISEASVNITPVEDYVLPPEAYFYRQDTGSPRTPTEAA--VKKAEEVVSTMLAKGF-V 164
Query: 284 LSKD--KKKSHSPVRHLVIVLIVVDVA-LDLALEIGDDLEVVVRDV-GHVREEDQDHVVD 339
LSKD K+ RH ++ VA LD + D G VR D+ V
Sbjct: 165 LSKDALKRARSFDDRHQLLSTASARVASLDRRFGLSDKFSAGTAAARGAVRGVDERFQVS 224
Query: 340 VLCLVIV 346
L V V
Sbjct: 225 ELARVAV 231
>gi|449438861|ref|XP_004137206.1| PREDICTED: uncharacterized protein LOC101204595 [Cucumis sativus]
Length = 403
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+ E RRT+ +I++ V+ + L F G V R C N +A +EF+D+
Sbjct: 211 KRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGA 270
Query: 220 IPALKLNGT 228
+L L+GT
Sbjct: 271 RASLNLSGT 279
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEFS+ + V AL
Sbjct: 66 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 126 LNESVFRGRNLKV 138
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 251 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALG 310
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 311 LSGQRLLGVPIMVQHT 326
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 43 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 102
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 103 LNESVFKGRNIKV 115
>gi|50547335|ref|XP_501137.1| YALI0B20460p [Yarrowia lipolytica]
gi|49647003|emb|CAG83390.1| YALI0B20460p [Yarrowia lipolytica CLIB122]
Length = 486
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 164 EIRRTLVAINI-EESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E R LV I ++ S Q + DFF K GT+N ++ N K A +EFS A A
Sbjct: 174 EYNRKLVVEKIPDDYCSEQAVRDFFSKFGTLNSVKV----NFAGKLAEIEFSTTAEAKNA 229
Query: 223 LKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA--QREIEEAMSRVKEAQNMISAAIDPV 280
K T + ++++ + PE NE A QR EE + +E + ++ +
Sbjct: 230 YKSPETIFDNRFVKVYWRKTDDETPE---NEVAEQQRLQEERQAAFEEKEQRRKEHLEKM 286
Query: 281 IGILSKDKK 289
GIL++ K+
Sbjct: 287 TGILAQKKQ 295
>gi|323304471|gb|EGA58240.1| Sgn1p [Saccharomyces cerevisiae FostersB]
Length = 141
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT--NKYALVEFSDQAC 218
++E R++ NI V+P+++ D F+ G + I N Y +EF A
Sbjct: 58 QLEADSRSIFVGNITPDVTPEQIEDHFKBCGQIKRITLLYDRNTGTPKGYGYIEFESPAY 117
Query: 219 VIPALKLNGTNLKGKTL 235
AL+LNG LKGK +
Sbjct: 118 XEKALQLNGGELKGKKI 134
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 108 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 167
Query: 226 NGTNLKGKTLQM 237
N T L G+ L++
Sbjct: 168 NETELHGRQLKV 179
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 237 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALG 296
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 297 LSGQRLLGVPIMVQHT 312
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 271 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 330
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 331 LSGQRLLGVPIMVQHT 346
>gi|389600963|ref|XP_003722977.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504591|emb|CBZ14490.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 404
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ L F + GT+ RE D ++ ++F+ + A+K NG L G
Sbjct: 16 NIDRSVTIDMLRQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKYNGFTLVG 75
Query: 233 KTLQMFHSTQSIQKPEA 249
+ L++ S ++ KPE
Sbjct: 76 RKLKVGVSKGNVNKPEG 92
>gi|224123716|ref|XP_002319148.1| predicted protein [Populus trichocarpa]
gi|222857524|gb|EEE95071.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++T+ V+V N++ A+ ++ F + G++E++ I RD QS+ +V F D K
Sbjct: 1 MQTRTVEVKNVSDLASEREVHEFFSFSGEIENIH---IQRDHG---QSKTAFVTFKDPKA 54
Query: 69 VGISQHLTNTVFIDRALVVTP 89
+ I+ L+ +D+ + +TP
Sbjct: 55 LEIALLLSGATIVDQIVAITP 75
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEF 213
T DT + + RR++ N+E S +PQ L ++F+ G +N I + + YA +EF
Sbjct: 30 TNDTSQDDVDRRSVYVGNVEYSATPQNLQEYFKSCGQINRITIMVDKWTGHPKGYAYIEF 89
Query: 214 SDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+ + V AL LN T K + +++ ++I
Sbjct: 90 AQEESVENALLLNETLFKERLIKVTSKRKNI 120
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 239 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALG 298
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 299 LSGQRLLGVPIMVQHT 314
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 93 RSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLL 152
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 153 NESELHGRQLK 163
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP D E +RT+ + I P++L +FF VG V +R T + +
Sbjct: 151 PPPNAKLDMTSEERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI 210
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
VEF + V AL LNG L G L IQ A+ N AA + ++
Sbjct: 211 CYVEFWEIESVNLALALNGQKLLGAPL-------VIQPTLAERNRAANNTVGGSLG 259
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 260 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 319
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 320 LSGQRLLGVPIMVQHT 335
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ + SP+E+ FQ G++N + + YA VEFS+ + V AL
Sbjct: 67 RSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 127 LNESLFRGRNLKV 139
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ S SP+E+ FQ G++N + +F + YA VEF++ + V
Sbjct: 79 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQ---PKGYAYVEFTEPSLVAQ 135
Query: 222 ALKLNGTNLKGKTLQM 237
AL LN + KG+ +++
Sbjct: 136 ALVLNESVFKGRNIKV 151
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 161 KIEEIRRTLVAI---NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFS 214
K EE++ I N+E+ V+ +E F+K G + +R+N+T K + V FS
Sbjct: 230 KFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATL-SRDNETGKSRGFGFVNFS 288
Query: 215 DQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEA--KSNEAAQREIEEA 262
D A++ LN LKG+ L + + + ++ E K EAA+ IE+A
Sbjct: 289 DHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR--IEKA 337
>gi|124802009|ref|XP_001347332.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23494910|gb|AAN35245.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 880
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK-LNG 227
+V NI+E S Q+L DF ++VG+V+Y + K+ ++EF + A+ LNG
Sbjct: 442 IVVKNIDEKASWQDLKDFGREVGSVSYANIVDDYHSKEKFGIIEFYNHENAKDAINILNG 501
Query: 228 TNLKGKTL 235
+ G+++
Sbjct: 502 KSFYGRSV 509
>gi|225711846|gb|ACO11769.1| Cleavage stimulation factor 64 kDa subunit [Lepeophtheirus
salmonis]
Length = 330
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQAC 218
+I++ R++ NI + ++L D F +VG V + REN K Y E+ D
Sbjct: 10 EIDKSARSVFVGNIPYEATEEKLKDIFSEVGPVTSFKLVYDRENGKPKGYGFCEYKDADM 69
Query: 219 VIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
+ A++ LNG ++G+TL++ ++ + E EA +
Sbjct: 70 ALSAMRNLNGYEIEGRTLRVDNACTEKNRLEMAKGEAEE 108
>gi|254564595|ref|XP_002489408.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|238029204|emb|CAY67124.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|328349837|emb|CCA36237.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Komagataella pastoris CBS 7435]
Length = 865
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 181 QELVDFFQKVGTVNYIRF-CTRENDTNKYALVEF-SDQACVIPALKLNGTNLKGKTLQMF 238
Q L D F +VGTV RF R N ++ ++F S+QA + K NG LK + +
Sbjct: 592 QSLEDLFSEVGTVLNTRFPSLRFNTDRRFCYIQFTSEQAAMDAVAKFNGKVLKDSQGKEY 651
Query: 239 HSTQSIQKPEAKSNEAAQ-REI 259
H I PE +S + + RE+
Sbjct: 652 HLVAKISNPEKRSQRSDEGREL 673
>gi|15238531|ref|NP_197832.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
gi|9758532|dbj|BAB08927.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332005928|gb|AED93311.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
Length = 320
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
I+RT+ +I+ V+ ++L F G V R C ++A +EF+D AL+
Sbjct: 135 IKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYKSILRFAFIEFTDAEGARSALR 194
Query: 225 LNGTNLKGKTLQMFHSTQSI 244
+GT +++F S +I
Sbjct: 195 KSGTMFGSHPIRVFMSKTAI 214
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 44 RSIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 103
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 104 LNESVFKGRNIKV 116
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma virens
Gv29-8]
Length = 171
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 44 RSIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 103
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 104 LNESVFKGRNIKV 116
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 44 RSIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALV 103
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 104 LNESVFKGRNIKV 116
>gi|226291492|gb|EEH46920.1| hypothetical protein PADG_03018 [Paracoccidioides brasiliensis
Pb18]
Length = 264
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 142 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALV 201
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 202 LNESVFRGRNLKV 214
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 76 NLNGREFSGRALRVDNAASEKNKEELKS 103
>gi|241670456|ref|XP_002411413.1| RNA recognition motif protein, putative [Ixodes scapularis]
gi|215504059|gb|EEC13553.1| RNA recognition motif protein, putative [Ixodes scapularis]
Length = 3850
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KL 225
RTL N+E+ ++ EL F + G + I ++ + YA +++SD A V+ A+ KL
Sbjct: 350 RTLFIGNLEKDITTSELRKHFDQFGEIIEIDI-KKQGSASSYAFIQYSDIASVVKAMRKL 408
Query: 226 NGTNLKGKTLQM 237
+G NL +++
Sbjct: 409 DGENLGANRIKL 420
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKY 208
PL I D EE RT+ + + + + ++L +FF VG V +R C +
Sbjct: 157 PLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGI 216
Query: 209 ALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 217 AYVEFKDPESVTLALGLSGQKLLG 240
>gi|356520229|ref|XP_003528766.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 277
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFC--TRENDTNKYALVEFSDQACVIPALKLN 226
L N+ ++V P++L D F + G V R ++ ++ YA + F +A A+ LN
Sbjct: 198 LYVGNLAKTVRPEQLRDLFSRFGNVVSARVLHDFKQGNSRVYAFLSFQSEAERDAAMSLN 257
Query: 227 GTNLKGKTL 235
GT G+TL
Sbjct: 258 GTEYYGRTL 266
>gi|401419092|ref|XP_003874036.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490270|emb|CBZ25530.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 408
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ L F + GT+ RE D ++ ++F+ + A+K NG L G
Sbjct: 16 NIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKYNGFTLVG 75
Query: 233 KTLQMFHSTQSIQKPE--AKSNEAA 255
+ L++ S ++ KPE A N A
Sbjct: 76 RKLKVGVSKGNVNKPEGYATGNGAG 100
>gi|58263254|ref|XP_569037.1| poly(A) binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107872|ref|XP_777318.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260008|gb|EAL22671.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223687|gb|AAW41730.1| poly(A) binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 210
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+E+ FQ GT+N + C + K YA VEF++ + V AL
Sbjct: 93 RSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALV 152
Query: 225 LNGTNLKGKTLQ 236
LN + +G+ LQ
Sbjct: 153 LNESMFRGRMLQ 164
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 71 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALV 130
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 131 LNESVFRGRNLKV 143
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP D E +RT+ + I + P++L +FF VG V +R T + +
Sbjct: 82 PPPNAKMDMTSEERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI 141
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
VEF + V AL LNG L G L IQ A+ N AA + +
Sbjct: 142 CYVEFWEIESVNLALALNGQKLLGAPL-------VIQPTLAERNRAANNTVGGTLG 190
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+EL F G++N + + YA VEFS+ V AL
Sbjct: 72 RSVFVGNVDYSASPEELQSHFGDCGSINRVTILLDKFTGQPKGYAYVEFSEPNMVAQALV 131
Query: 225 LNGTNLKGKTLQ 236
LN + KG+ ++
Sbjct: 132 LNDSLFKGRNIK 143
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 161 KIEEIRRTLVAI---NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFS 214
K EE++ I N+E+ V+ +E F+K G + +R+N+T K + V FS
Sbjct: 230 KFEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATL-SRDNETGKSRGFGFVNFS 288
Query: 215 DQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEA--KSNEAAQREIEEA 262
D A++ LN LKG+ L + + + ++ E K EAA+ IE+A
Sbjct: 289 DHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR--IEKA 337
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 242 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 301
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 302 LSGQRLLGVPIMVQHT 317
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP D E +RT+ + I + P++L +FF VG V +R T + +
Sbjct: 251 PPPNAKMDMTSEERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI 310
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREI 259
VEF + V AL LNG L G L IQ A+ N AA +
Sbjct: 311 CYVEFWEIESVNLALALNGQKLLGAPL-------VIQPTLAERNRAANNTV 354
>gi|430811633|emb|CCJ30944.1| unnamed protein product [Pneumocystis jirovecii]
Length = 176
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+E+ FQ GT+N + C R + K +A +EFS+ V AL
Sbjct: 63 RSVYVGNVDYGATPEEIQAHFQTCGTINRVTILCDRYSGHPKGFAYIEFSEPGLVPQALV 122
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 123 LNESLFRGRLLKV 135
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 65 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALV 124
Query: 225 LNGTNLKGKTLQM 237
LN + +G++L++
Sbjct: 125 LNESVFRGRSLKV 137
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKY 208
PL I D EE RT+ + + + + ++L +FF VG V +R C +
Sbjct: 145 PLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGI 204
Query: 209 ALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 205 AYVEFKDPESVTLALGLSGQKLLG 228
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP D E +RT+ + I + P++L +FF VG V +R T + +
Sbjct: 137 PPPNAKMDMTSEERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI 196
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
VEF + V AL LNG L G L IQ A+ N AA + +
Sbjct: 197 CYVEFWEIESVNLALALNGQKLLGAPL-------VIQPTLAERNRAANNTVGGTLG 245
>gi|358387229|gb|EHK24824.1| hypothetical protein TRIVIDRAFT_215683 [Trichoderma virens Gv29-8]
Length = 116
Score = 40.8 bits (94), Expect = 1.3, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 11 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIAGN-TKGTAFVVYEDVMDAKQAC 69
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + K +K + A+RE
Sbjct: 70 D----KLNGFNFQNRYLVVLYHQPDKMVK--SKEDLDARRE 104
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKY 208
PL I D EE RT+ + + + + ++L +FF VG V +R C +
Sbjct: 133 PLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGI 192
Query: 209 ALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 193 AYVEFKDPESVTLALGLSGQKLLG 216
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ S SP+++ FQ G++N + +F + YA VEF++ + V
Sbjct: 82 RSIFVGNVDYSASPEDIQSHFQSCGSINRVTILLDKFTGQ---PKGYAYVEFTEPSLVAQ 138
Query: 222 ALKLNGTNLKGKTLQM 237
AL LN + KG+ +++
Sbjct: 139 ALVLNESVFKGRNIKV 154
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKY 208
PL I D EE RT+ + + + + ++L +FF VG V +R C +
Sbjct: 133 PLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGI 192
Query: 209 ALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 193 AYVEFKDPESVTLALGLSGQKLLG 216
>gi|221055067|ref|XP_002258672.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808742|emb|CAQ39444.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 837
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK-LNG 227
+V N++E S Q+L DF + +G+VNY EN ++ ++E+ + V A++ LNG
Sbjct: 417 IVIRNVDEKASWQDLKDFGRDIGSVNYANIFQDEN-KERFGIIEYYNYENVKKAVEVLNG 475
Query: 228 TNLKGKTLQ 236
G T++
Sbjct: 476 RKFNGITVE 484
>gi|389583241|dbj|GAB65976.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 728
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 151 PPLPITYDTKKIEEIRRT----LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN 206
PP Y + E + +V N++E S Q+L DF + VG+VNY +N
Sbjct: 224 PPYARNYSPNRNENREKKNALRIVVKNVDEKASWQDLKDFGRDVGSVNYANIIQDDN-KE 282
Query: 207 KYALVEFSDQACVIPALK-LNGTNLKG 232
++ ++E+ + V A++ LNG G
Sbjct: 283 RFGIIEYYNYENVKKAVEVLNGRKFNG 309
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKY 208
PL I D EE RT+ + + + + ++L +FF VG V +R C +
Sbjct: 131 PLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGI 190
Query: 209 ALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 191 AYVEFKDPESVTLALGLSGQKLLG 214
>gi|389633809|ref|XP_003714557.1| pre-mRNA branch site protein p14 [Magnaporthe oryzae 70-15]
gi|351646890|gb|EHA54750.1| pre-mRNA branch site protein p14 [Magnaporthe oryzae 70-15]
gi|440466499|gb|ELQ35764.1| pre-mRNA branch site protein p14 [Magnaporthe oryzae Y34]
gi|440482089|gb|ELQ62610.1| pre-mRNA branch site protein p14 [Magnaporthe oryzae P131]
Length = 115
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASN-TKGTAFVVYEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL-QMFHSTQSIQKP----EAKSNEAAQ 256
KLNG N + + L ++H + + + EA+ AQ
Sbjct: 69 D----KLNGFNFQNRYLVVLYHQPEKMARSKEDLEARKENLAQ 107
>gi|449301196|gb|EMC97207.1| hypothetical protein BAUCODRAFT_68306 [Baudoinia compniacensis UAMH
10762]
Length = 223
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEFS+ V AL
Sbjct: 73 RSVFVGNVDYGASPEEIQAHFQTCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALV 132
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 133 LNDSQFRGRAIKV 145
>gi|426198097|gb|EKV48023.1| hypothetical protein AGABI2DRAFT_68353, partial [Agaricus bisporus
var. bisporus H97]
Length = 332
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+E+ FQ GT+N + C + K YA VEF++ V AL
Sbjct: 53 RSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEHVDAALS 112
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSNE 253
++ + +G+ +++ + PE + E
Sbjct: 113 MDNSLFRGRLIKVRRDQEDAVAPEEDTGE 141
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP D E +RT+ + I P++L +FF VG V +R T + +
Sbjct: 234 PPPNAKLDMTSEERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI 293
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
VEF + V AL LNG L G L IQ A+ N AA + ++
Sbjct: 294 CYVEFWEIESVNLALALNGQKLLGAPL-------VIQPTLAERNRAANNTVGGSLG 342
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 40.8 bits (94), Expect = 1.4, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-Y 208
PP P++ + KK E +R++ N++ + Q+L F G++N I C + + K Y
Sbjct: 22 PPQPLSAEEKK-EIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGY 80
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
A +EF+++ V A+ ++ T +G+T+++
Sbjct: 81 AYIEFAERNSVDAAVAMDETVFRGRTIKVL 110
>gi|406603167|emb|CCH45320.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Wickerhamomyces ciferrii]
Length = 1005
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEK 67
VV VAN P +T+D + LF +GK+ +R +P + Q R CYV++ + K
Sbjct: 665 VVWVANFPPSSTKDDIHALFSPIGKLAGIR-FP---SLKFNSQRRFCYVEYLESK 715
>gi|355681348|gb|AER96779.1| cleavage stimulation factor, 3 pre-RNA subunit 2, tau [Mustela
putorius furo]
Length = 174
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK-LNGTN 229
NI + ++L D F +VG+V R RE K Y E+ DQ + A++ LNG
Sbjct: 1 NIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGRE 60
Query: 230 LKGKTLQMFHSTQSIQKPEAKS 251
G+ L++ ++ K E KS
Sbjct: 61 FSGRALRVDNAASEKNKEELKS 82
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKY 208
PL I D EE RT+ + + + + ++L +FF VG V +R C +
Sbjct: 131 PLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGI 190
Query: 209 ALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V AL L+G L G
Sbjct: 191 AYVEFKDPESVTLALGLSGQKLLG 214
>gi|255074381|ref|XP_002500865.1| predicted protein [Micromonas sp. RCC299]
gi|226516128|gb|ACO62123.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ ++ + +P+EL F+ GTVN + T + D K +A VEF + V A+KL
Sbjct: 82 RSVHVGGVDYATTPEELAKHFEACGTVNRVTILTDKYDNPKGFAYVEFLEADAVQNAIKL 141
Query: 226 NGTNLKGKTLQM 237
T + G+ L++
Sbjct: 142 TDTEIHGRKLRV 153
>gi|158291352|ref|XP_001237501.2| AGAP003171-PA [Anopheles gambiae str. PEST]
gi|157017734|gb|EAU77012.2| AGAP003171-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKY-ALVEFSDQ 216
D K+I + + T+ NI + +L +FF +VG + Y+R +KY A V F
Sbjct: 195 DKKQIGDAKATVFVGNIARGTTDNDLHEFFSRVGPIEYVRQI-----GDKYVAYVCFKKG 249
Query: 217 ACVIPALKLNGTNLKGKTLQM 237
++ ALKLN +L G+ +++
Sbjct: 250 VSIMKALKLNQESLNGRLIRV 270
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 92 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALV 151
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 152 LNESVFRGRNLKV 164
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 67 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 127 LNESVFRGRNLKV 139
>gi|449483221|ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Cucumis
sativus]
Length = 316
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+ E RRT+ +I++ V+ + L F G V R C N +A +EF+D+
Sbjct: 124 KRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGA 183
Query: 220 IPALKLNGT 228
+L L+GT
Sbjct: 184 RASLNLSGT 192
>gi|146083801|ref|XP_001464839.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134068934|emb|CAM67075.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 409
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ L F + GT+ RE D ++ ++F+ + A+K NG L G
Sbjct: 16 NIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKYNGFTLVG 75
Query: 233 KTLQMFHSTQSIQKPEA 249
+ L++ S ++ KPE
Sbjct: 76 RKLKVGVSKGNVNKPEG 92
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 149 QYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN-- 206
Q P +T K+E +L ++ SVS L D F +G+V+ IR C R+ TN
Sbjct: 20 QTAPTTTESETPKVETSGASLYVGELDPSVSEALLYDIFSPIGSVSSIRVC-RDAITNTS 78
Query: 207 -KYALVEFSDQACVIPAL-KLNGTNLKGKTLQMFHS 240
YA V F D A+ +LN T +KGK ++ S
Sbjct: 79 LGYAYVNFHDHEAGRKAIEQLNYTLIKGKPCRIMWS 114
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 161 KIEEIRRTLVAI---NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFS 214
K EE++ I N+E+ V+ +E F+K G + +R+N+T K + V FS
Sbjct: 230 KFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATL-SRDNETGKSRGFGFVNFS 288
Query: 215 DQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEA--KSNEAAQREIEEA 262
D A++ LN LKG+ L + + + ++ E K EAA+ IE+A
Sbjct: 289 DHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR--IEKA 337
>gi|398013689|ref|XP_003860036.1| RNA-binding protein, putative [Leishmania donovani]
gi|322498255|emb|CBZ33329.1| RNA-binding protein, putative [Leishmania donovani]
Length = 409
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ L F + GT+ RE D ++ ++F+ + A+K NG L G
Sbjct: 16 NIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKYNGFTLVG 75
Query: 233 KTLQMFHSTQSIQKPEA 249
+ L++ S ++ KPE
Sbjct: 76 RKLKVGVSKGNVNKPEG 92
>gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312496|gb|EFH42920.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 220
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YA 209
P I + EE+ R++ N++ + +P+E+ FQ GTV+ + T + K +A
Sbjct: 76 PASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFA 135
Query: 210 LVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
VEF + V AL+LN + L G+ L++ ++
Sbjct: 136 YVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNV 170
>gi|407041600|gb|EKE40843.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 135
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N+E + + +EL D F++ G V + + T YA +EF + V A+K
Sbjct: 39 RSVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQLTQKTMGYANIEFKNSNAVEKAIK 98
Query: 225 LNGTNLKGKTLQM 237
L GTNL G+ +++
Sbjct: 99 LTGTNLNGRYIEV 111
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 148 PQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDT 205
P + LPI D E +RT+ + + + + ++L +FF VG V ++ C +
Sbjct: 148 PTFSKLPID-DLTPEERDQRTVFCMQLSQRIRGRDLEEFFSSVGKVRDVKLITCNKTRRF 206
Query: 206 NKYALVEFSDQACVIPALKLNGTNLKG 232
A VEF D V A+ L G L G
Sbjct: 207 KGIAYVEFKDPESVPLAMGLTGQKLLG 233
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 67 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 127 LNESVFRGRNLKV 139
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKY 208
PP D E +RT+ + I + P++L +FF VG V +R T + +
Sbjct: 259 PPPNAKMDMTSEERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGI 318
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMS 264
VEF + V AL LNG L G L IQ A+ N AA + +
Sbjct: 319 CYVEFWEIESVNLALALNGQKLLGAPL-------VIQPTLAERNRAANNTVGGTLG 367
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 71 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQALV 130
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 131 LNESVFRGRNLKV 143
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 161 KIEEIRRTLVAI---NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFS 214
K EE++ I N+E+ V+ +E F+K G + +R+N+T K + V FS
Sbjct: 246 KFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATL-SRDNETGKSRGFGFVNFS 304
Query: 215 DQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEA--KSNEAAQREIEEA 262
D A++ LN LKG+ L + + + ++ E K EAA+ IE+A
Sbjct: 305 DHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR--IEKA 353
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 161 KIEEIRRTLVAI---NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFS 214
K EE++ I N+E+ V+ +E F+K G + +R+N+T K + V FS
Sbjct: 230 KFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATL-SRDNETGKSRGFGFVNFS 288
Query: 215 DQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEA--KSNEAAQREIEEA 262
D A++ LN LKG+ L + + + ++ E K EAA+ IE+A
Sbjct: 289 DHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR--IEKA 337
>gi|389797738|ref|ZP_10200778.1| hypothetical protein UUC_08471 [Rhodanobacter sp. 116-2]
gi|388446812|gb|EIM02832.1| hypothetical protein UUC_08471 [Rhodanobacter sp. 116-2]
Length = 396
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 28/189 (14%)
Query: 82 DRALVVTPYNSGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQI--EGV---PPNQVIS 136
D +L P G +E RA + G +G+ + PA +Q +G P + +
Sbjct: 116 DASLAGAPMVPGRNLEELRARDAVIVDAGGTTGKLETPALARDQWPHDGAHLDAPTRELR 175
Query: 137 THDPVLV----------QHGLPQYPPLPITYDTKK-------IEEIRRTLVAINIEESVS 179
D +LV LP+YPP P+ Y T +E T V + VS
Sbjct: 176 GGDELLVNEHLVRVLGQSSALPRYPPRPLLYTTLSNALRILPVEPHTLTFVMVRAAAGVS 235
Query: 180 PQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLN---GTNLKGKTLQ 236
P+EL ++ + ++DT ++ LV D + L L G + G L
Sbjct: 236 PRELARRIEQRTGLRARATADFKSDTVRWFLVNSEDVGDIAAMLTLAMTMGFGVTGVMLY 295
Query: 237 MF---HSTQ 242
MF H +Q
Sbjct: 296 MFTYEHQSQ 304
>gi|347969404|ref|XP_312862.4| AGAP003173-PA [Anopheles gambiae str. PEST]
gi|333468509|gb|EAA44783.4| AGAP003173-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKY-ALVEFSDQ 216
D K+I + + T+ NI + +L +FF +VG + Y+R +KY A V F
Sbjct: 195 DKKQIGDAKATVFVGNIARGTTDNDLHEFFSRVGPIEYVRQI-----GDKYVAYVCFKKG 249
Query: 217 ACVIPALKLNGTNLKGKTLQM 237
++ ALKLN +L G+ +++
Sbjct: 250 VSIMKALKLNQESLNGRLIRV 270
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 66 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 126 LNESVFRGRNLKV 138
>gi|226532287|ref|NP_001142295.1| uncharacterized protein LOC100274464 [Zea mays]
gi|194693552|gb|ACF80860.1| unknown [Zea mays]
gi|194708070|gb|ACF88119.1| unknown [Zea mays]
gi|413933259|gb|AFW67810.1| putative RNA recognition motif containing family protein [Zea
mays]
Length = 283
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++ K V+V+N++ + ++ F + G +E + + S S++ YV F D +
Sbjct: 1 MEVKTVKVSNLSLNVLKRELTEFFSFSGDIEYVEMQ------SESEWSQLAYVTFKDSQG 54
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDE 98
+ L+ +DRA+++TP + ++P E
Sbjct: 55 ADTAVLLSGATIVDRAVIITPAENYQLPPE 84
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 67 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 127 LNESVFRGRNLKV 139
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + + + ++L +FF VG V +R C + A +EF D V AL
Sbjct: 171 RTVFCMQLSQRIHARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKDPESVALALG 230
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 231 LSGQKLLGIPISVQHT 246
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR--FCTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 237 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLILCNKTKRFKGIAYIEFEDPESVALALG 296
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 297 LSGQRLLGVPIMVQHT 312
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 166 RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEFSDQACVIPAL 223
+R++ +++ +P+EL + F+ G +N I + + +A VEF+D+ V +L
Sbjct: 60 KRSVYIGSVDYGSTPEELQEHFKSCGQINRITILVDKYSGHPKGFAYVEFADEQSVQNSL 119
Query: 224 KLNGTNLKGKTLQMFHSTQSI 244
LNG+ +G+ L++ ++
Sbjct: 120 LLNGSLFRGRQLKVMQKRTNV 140
>gi|15238390|ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YA 209
P I + EE+ R++ N++ + +P+E+ FQ GTV+ + T + K +A
Sbjct: 76 PASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFA 135
Query: 210 LVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
VEF + V AL+LN + L G+ L++ ++
Sbjct: 136 YVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNV 170
>gi|224114678|ref|XP_002339510.1| predicted protein [Populus trichocarpa]
gi|222832586|gb|EEE71063.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GTVN + T + K +A VEF + + AL L
Sbjct: 100 RSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAIQNALLL 159
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 160 NESELHGRQLK 170
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 149 QYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN-- 206
Q P +T K+E +L +E +VS L D F +G+V+ IR C R+ TN
Sbjct: 20 QTAPTTTESETPKVETSGASLYVGELEPTVSEALLYDIFSPIGSVSSIRVC-RDAITNTS 78
Query: 207 -KYALVEFSDQACVIPAL-KLNGTNLKGKTLQMFHS 240
YA V F D A+ +LN T +KGK ++ S
Sbjct: 79 LGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWS 114
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-Y 208
PP P++ + KK E +R++ N++ + Q+L F G++N I C + + K Y
Sbjct: 78 PPRPLSAEEKK-EIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGY 136
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
A +EF+++ V A+ ++ T +G+T+++
Sbjct: 137 AYIEFAERNSVDVAVAMDETVFRGRTIKVL 166
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEFSDQACVI 220
E+ +R++ +++ +P+EL + F+ G + I + + +A +EF D+A V
Sbjct: 97 EQDKRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIEFGDEAAVQ 156
Query: 221 PALKLNGTNLKGKTLQMF 238
AL LN T +G+ L++
Sbjct: 157 NALLLNDTMFRGRQLKVL 174
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + +++ ++L +FF VG V +R C + A +EF D V A+
Sbjct: 140 RTVFCMQLSKTIRARDLEEFFSSVGKVRDVRMITCNKTRRFKGIAYIEFKDPESVPLAMG 199
Query: 225 LNGTNLKG 232
LNG L G
Sbjct: 200 LNGQKLLG 207
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 168 TLVAINIEESVSPQELVDFFQKVGTVNYIRFCTR---ENDTNK----YALVEFSDQACVI 220
TL NI S + ++L D+F K G ++YI T+ EN TNK Y V + +
Sbjct: 677 TLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKKDPENPTNKLSMGYGFVRYKRKHDAD 736
Query: 221 PALK-LNGTNLKGKTLQMFHSTQSI 244
ALK L + L GK+L++ S +++
Sbjct: 737 RALKTLQMSVLDGKSLELKRSERTL 761
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 66 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 126 LNESVFRGRNLKV 138
>gi|47205673|emb|CAF92894.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 25/27 (92%)
Query: 253 EAAQREIEEAMSRVKEAQNMISAAIDP 279
+A+ +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 73 DASSKEIEEAMKRVREAQSLISAAIEP 99
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + + + ++L +FF VG V +R C + A VEF D V AL
Sbjct: 157 RTIFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALG 216
Query: 225 LNGTNLKG 232
L+G L G
Sbjct: 217 LSGQKLLG 224
>gi|398396208|ref|XP_003851562.1| hypothetical protein MYCGRDRAFT_73322 [Zymoseptoria tritici IPO323]
gi|339471442|gb|EGP86538.1| hypothetical protein MYCGRDRAFT_73322 [Zymoseptoria tritici IPO323]
Length = 115
Score = 40.4 bits (93), Expect = 1.6, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFS 214
++ +K E+ R L N+ +VS +EL D F K G + IR N T A V +
Sbjct: 1 MSRSSKVAPEVNRALFVKNLSYNVSTEELFDLFGKFGPIRQIRQGIATN-TKGTAFVVYE 59
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQR-EIEEAMSR 265
D A KLNG N + + L + + I K + AQR E EA+ R
Sbjct: 60 DVLDAKSACDKLNGFNFQNRYLVVLY--HQIDKMAKSQQDMAQRTENLEALKR 110
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 161 KIEEIRRTLVAI---NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFS 214
K EE++ I N+E+ V+ +E F+K G + +R+N+T K + V FS
Sbjct: 230 KFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATL-SRDNETGKSRGFGFVNFS 288
Query: 215 DQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEA--KSNEAAQREIEEA 262
D A++ LN LKG+ L + + + ++ E K EAA+ IE+A
Sbjct: 289 DHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR--IEKA 337
>gi|255539947|ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 234
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 133 QVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGT 192
Q IS P+ + L Y +K E R++ N++ + +P+E+ FQ GT
Sbjct: 87 QGISHSLPLSIYIVLWSYSSSGSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGT 146
Query: 193 VNYIRFCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQM 237
VN + T + K +A VEF + V AL LN + L G+ L++
Sbjct: 147 VNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKV 192
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSD 215
+ +K+E R++ N++ +P+E+ FQ GT+N + C + K +A VEF+D
Sbjct: 84 EEEKMEVDGRSIYVGNVDYGATPEEIQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFAD 143
Query: 216 QACVIPALKLNGTNLKGKTLQM 237
+ V A LN + +G+ L++
Sbjct: 144 SSFVENAAVLNESLFRGRLLKV 165
>gi|303388059|ref|XP_003072264.1| RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
gi|303301403|gb|ADM10904.1| RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
Length = 101
Score = 40.4 bits (93), Expect = 1.7, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
N++ SVS ++ F+ G ++ I + +N + KYA+++FS + V +L NG+ LKG
Sbjct: 32 NLDASVSNSDIAAHFRSCGNISGINVISTKN-SKKYAIIDFSSEKSVEMSLLFNGSVLKG 90
Query: 233 KTL 235
K +
Sbjct: 91 KKI 93
>gi|308809515|ref|XP_003082067.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116060534|emb|CAL55870.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 412
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 139 DPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRF 198
D V V G P P EE+RRT N +++ +++ F GT+ R
Sbjct: 267 DAVGVGFGAPAVAP----------EELRRTAHVSNYPSALTVEQVKQLFSFCGTIVECR- 315
Query: 199 CTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQM 237
E + K +A +EF + AL LNG N+ G+ +++
Sbjct: 316 ---EGPSGKNFAFIEFESNKEALAALALNGMNVGGRNIRV 352
>gi|116181616|ref|XP_001220657.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185733|gb|EAQ93201.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 115
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASN-TKGTAFVVYEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL 235
KLNG N + + L
Sbjct: 69 D----KLNGYNFQNRYL 81
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 67 RSIFVGNVDYGASPEEIQTHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQ 236
LN + +G+ L+
Sbjct: 127 LNESIFRGRALK 138
>gi|146101305|ref|XP_001469083.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|398023353|ref|XP_003864838.1| RNA binding protein, putative [Leishmania donovani]
gi|134073452|emb|CAM72182.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|322503074|emb|CBZ38158.1| RNA binding protein, putative [Leishmania donovani]
Length = 197
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 173 NIEESVSPQELVDFFQKVG--TVNYIRFCT-RE-NDTNKYALVEFSDQACVIPALKLNGT 228
N+ + + +++ FFQ+ G V +R RE D + VEF + V PA++ G
Sbjct: 18 NVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGFGYVEFMHASSVQPAIETRGD 77
Query: 229 NLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
L G+ L++ H +S + A + +R E A RV
Sbjct: 78 KLNGRELRIVHVNKSKEVKVATKSRREKRRSEHAGGRV 115
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ + SP+E+ FQ G++N + + YA VEFS+ + V AL
Sbjct: 67 RSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 127 LNESLFRGRNIKV 139
>gi|85000163|ref|XP_954800.1| RNA poly(A)-binding protein [Theileria annulata strain Ankara]
gi|65302946|emb|CAI75324.1| RNA poly(A)-binding protein, putative [Theileria annulata]
Length = 176
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 158 DTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEFS 214
DT E++ +R++ N++ S PQEL +FF+ G +N I + + YA VEFS
Sbjct: 32 DTDNNEDVDKRSIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFS 91
Query: 215 DQACVIPALKLNGTNLKGKTLQ 236
++ V A+ LN + K + ++
Sbjct: 92 NEDAVNNAIMLNESLFKERIIK 113
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ + SP+E+ FQ G++N + + YA VEFS+ + V AL
Sbjct: 67 RSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 127 LNESLFRGRNIKV 139
>gi|219120225|ref|XP_002180856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407572|gb|EEC47508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 97
Score = 40.4 bits (93), Expect = 1.7, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 174 IEESVSPQELVDFFQKVGTVNYIRF-CTRENDTNK-YALVEFSDQACVIPALKLNGTNLK 231
++ S +P+EL+ F+ GTV + C + K +A +EF +++ V ALKL+ + K
Sbjct: 10 VDYSTTPEELLAHFEACGTVERVTIVCDKFTGKPKGFAYLEFENESSVENALKLDESEFK 69
Query: 232 GKTLQMFH 239
G+ L++ H
Sbjct: 70 GRQLKITH 77
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYI-----RFCTRENDTNKYALVEFSDQACVIP 221
R++ N++ SP+E+ FQ G++N + +F + YA VEF++ + V
Sbjct: 67 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQ---PKGYAYVEFAEPSLVAQ 123
Query: 222 ALKLNGTNLKGKTLQM 237
AL LN + +G+ L++
Sbjct: 124 ALVLNESVFRGRNLKV 139
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V A+ L
Sbjct: 93 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVML 152
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 153 NESELHGRQLK 163
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 163 EEIR-RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACV 219
EEI R++ N++ S P+EL F + G +N + +N + YA +EF+D + V
Sbjct: 66 EEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSV 125
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+ + K + +++ ++I
Sbjct: 126 RTALSLSESFFKKRQIKVCSKRRNI 150
>gi|453084773|gb|EMF12817.1| pre-mRNA branch site protein p14 [Mycosphaerella populorum SO2202]
Length = 115
Score = 40.4 bits (93), Expect = 1.8, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFS 214
++ +K E+ R L N+ +VS +EL D F K G + IR N T A V +
Sbjct: 1 MSRSSKLAPEVNRALFVKNLSYNVSTEELFDLFGKFGPIRQIRQGIAAN-TKGTAFVVYE 59
Query: 215 DQACVIPAL-KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
D A KLNG N + + L ++H + + K +A + A+R +E + ++K+ +
Sbjct: 60 DVMDAKGACDKLNGFNFQNRYLVVLYHQPEKMAKSQA---DLAER--QENLEKLKQQHGI 114
>gi|367052823|ref|XP_003656790.1| hypothetical protein THITE_2171338 [Thielavia terrestris NRRL 8126]
gi|347004055|gb|AEO70454.1| hypothetical protein THITE_2171338 [Thielavia terrestris NRRL 8126]
Length = 115
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASN-TKGTAFVVYEDVMDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL 235
KLNG N + + L
Sbjct: 69 D----KLNGYNFQNRYL 81
>gi|170034332|ref|XP_001845028.1| RNA-binding protein 34 [Culex quinquefasciatus]
gi|167875661|gb|EDS39044.1| RNA-binding protein 34 [Culex quinquefasciatus]
Length = 468
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K + I T+ NI + EL DFF +VG + Y+R + + V F +
Sbjct: 301 KHLGHIASTVFVGNISRKTTDNELYDFFGQVGEIEYVRQISDKG----IGYVCFKKGVSI 356
Query: 220 IPALKLNGTNLKGKTLQM 237
ALKLN L G+ L++
Sbjct: 357 AKALKLNQQQLNGRPLRI 374
>gi|452002585|gb|EMD95043.1| hypothetical protein COCHEDRAFT_1090393 [Cochliobolus
heterostrophus C5]
Length = 115
Score = 40.0 bits (92), Expect = 1.9, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R L N+ +V+P+EL D F K G V IR N + A V + D A
Sbjct: 10 EVNRALFVKNLSFNVTPEELFDLFGKFGPVRQIRQGI-ANHSKGTAFVVYEDVMDAKSAC 68
Query: 224 -KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNM 272
KLNG N + + L ++H + K +N+ A+R +E + ++K+ +
Sbjct: 69 DKLNGFNFQNRYLVVLYHQPDKMLK---AANDLAER--QENLEKLKKQHGI 114
>gi|428671247|gb|EKX72165.1| conserved hypothetical protein [Babesia equi]
Length = 146
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 134 VISTHDPVLVQHGLPQYPPLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGT 192
+ S + ++ G+ P D ++ E++ +R++ N++ S PQEL +FF+ G
Sbjct: 4 IKSLDEELMSLQGMTDANPGADDVDMEENEDVDKRSVYVGNVDYSTKPQELQEFFKSSGQ 63
Query: 193 VNYIRFCTRENDTN--KYALVEFSDQACVIPALKLNGTNLKGKTLQM 237
+N I + + YA +EFS + V A+ LN + K + +++
Sbjct: 64 INRITIMVDKWTGHPKGYAYIEFSSEDAVNNAVMLNESLFKERIIKV 110
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
+++ N++ S +P EL + F+ GTVN + + +A VEFSD + V +L
Sbjct: 88 KSIYVGNVDFSATPGELAEHFKTCGTVNRVTILMDKVTGRPKGFAYVEFSDPSSVSESLV 147
Query: 225 LNGTNLKGKTLQM 237
LN + G+ L++
Sbjct: 148 LNDSEFHGRNLKV 160
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ + SP+E+ FQ G++N + + YA VEFS+ + V AL
Sbjct: 67 RSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 127 LNESLFRGRNIKV 139
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 163 EEIR-RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACV 219
EEI R++ N++ S P+EL F + G +N + +N + YA +EF+D + V
Sbjct: 66 EEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSV 125
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+ + K + +++ ++I
Sbjct: 126 RTALSLSESFFKKRQIKVCSKRRNI 150
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 92 SGEIPDEQRALEIAAQQQGPNSGEPKLPAHVTNQIEGVP---------PNQVISTHDPVL 142
+IPDE+ ++ A+QQ E P H ++E + + + V
Sbjct: 10 GADIPDEEIDMDADAEQQD----EQLAPNHTNKELEDMKKRLKEIEEEASALREMQAKVE 65
Query: 143 VQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE 202
+ G Q +K E R++ N++ + +P+E+ FQ GTVN + T +
Sbjct: 66 KEMGAVQDSSGTSATQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 125
Query: 203 NDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQM 237
K +A VEF + V AL LN + L G+ L++
Sbjct: 126 FGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKV 161
>gi|452840644|gb|EME42582.1| hypothetical protein DOTSEDRAFT_73428 [Dothistroma septosporum
NZE10]
Length = 114
Score = 40.0 bits (92), Expect = 1.9, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R L N+ +V+ +EL D F K G++ IR N T A V + D A
Sbjct: 9 EVNRALFVKNLSYNVTTEELFDLFGKFGSIRQIRQGIASN-TKGTAFVVYEDVMDAKSAC 67
Query: 224 -KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEAMSR 265
KLNG N + + L ++H + + K +A + A ++E E + R
Sbjct: 68 DKLNGFNFQNRYLVVLYHQPEKMAKSQA--DLAERQENLEKLKR 109
>gi|256274155|gb|EEU09065.1| Sgn1p [Saccharomyces cerevisiae JAY291]
gi|259147260|emb|CAY80513.1| Sgn1p [Saccharomyces cerevisiae EC1118]
gi|323348162|gb|EGA82416.1| Sgn1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 250
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT--NKYALVEFSDQAC 218
++E R++ NI V+P+++ D F+ G + I N Y +EF A
Sbjct: 58 QLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAY 117
Query: 219 VIPALKLNGTNLKGKTL 235
AL+LNG LKGK +
Sbjct: 118 REKALQLNGGELKGKKI 134
>gi|428184043|gb|EKX52899.1| hypothetical protein GUITHDRAFT_101349 [Guillardia theta CCMP2712]
Length = 515
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD 215
T K + ++ T++ + E V + L +FF K G +R + + K A ++F
Sbjct: 283 TLTAKAKKNMQTTVLVKKLSEDVDTKILSEFFSKCGEAMEVRMASAHGE--KIAFIKFGT 340
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNE 253
+ ALK+ GT LKG L + + ++ EA+ ++
Sbjct: 341 KTAFRKALKMKGTELKGMKLLVSAAKNVTERSEAQEHQ 378
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 178 VSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQM 237
VS +L D F + G ++ N A+VEF+D+A A+ LNGT + GK L++
Sbjct: 123 VSVADLQDLFSECGQTRQVKI-----KGNGKAIVEFNDKAAAHTAMSLNGTEIDGKVLKV 177
>gi|308505902|ref|XP_003115134.1| CRE-EXO-3 protein [Caenorhabditis remanei]
gi|308259316|gb|EFP03269.1| CRE-EXO-3 protein [Caenorhabditis remanei]
Length = 334
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRF-CTRENDT-NKYALVEFSDQACVIPAL-KLNGTN 229
N + QEL D+F VG V ++ C RE +A VEF+D+A A +LNG +
Sbjct: 262 NAAYQTTEQELGDYFSSVGQVTNVKIVCDRETGRPRGFAFVEFADEASAQKACEQLNGAD 321
Query: 230 LKGKTLQ 236
G+ L+
Sbjct: 322 FNGRQLR 328
>gi|384244690|gb|EIE18189.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 210
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ ++ + +P+EL FQ GTVN + T + + YA +EF + V AL L
Sbjct: 79 RSVYVGQVDYACTPEELQMHFQSCGTVNRVTILTDKFGNPKGYAYIEFLETDAVANALLL 138
Query: 226 NGTNLKGKTLQMF 238
+ + L+G+ L++
Sbjct: 139 DSSELRGRELKVL 151
>gi|323333070|gb|EGA74471.1| Sgn1p [Saccharomyces cerevisiae AWRI796]
Length = 250
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT--NKYALVEFSDQAC 218
++E R++ NI V+P+++ D F+ G + I N Y +EF A
Sbjct: 58 QLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAY 117
Query: 219 VIPALKLNGTNLKGKTL 235
AL+LNG LKGK +
Sbjct: 118 REKALQLNGGELKGKKI 134
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + + + ++L +FF VG V +R C + A +EF D V AL
Sbjct: 205 RTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKDPESVALALG 264
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 265 LSGQRLLGIPISVQHT 280
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 67 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 127 LNESVFRGRNLKV 139
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KLNG 227
LV N+ S Q+L D +K G V ++ T +VEF+ ++ + A+ KL+G
Sbjct: 121 LVVENLSSRTSWQDLKDLMRKAGEVTFV---DAHRPTKNEGVVEFASRSDMKNAISKLDG 177
Query: 228 TNLKGKTLQMF 238
T L G+ L+MF
Sbjct: 178 TELNGRKLKMF 188
>gi|240281788|gb|EER45291.1| RNP domain-containing protein [Ajellomyces capsulatus H143]
Length = 188
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 66 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 126 LNESVFRGRNLKV 138
>gi|367019080|ref|XP_003658825.1| hypothetical protein MYCTH_105822 [Myceliophthora thermophila ATCC
42464]
gi|347006092|gb|AEO53580.1| hypothetical protein MYCTH_105822 [Myceliophthora thermophila ATCC
42464]
Length = 115
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSD-----QAC 218
E+ R L N+ +V+P+EL D F K G + +R N T A V + D QAC
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKYGPIRQVRQGIASN-TKGTAFVVYEDVLDAKQAC 68
Query: 219 VIPALKLNGTNLKGKTL 235
KLNG N + + L
Sbjct: 69 D----KLNGYNFQNRYL 81
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + YA VEF++ V AL
Sbjct: 82 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPNLVAQALV 141
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 142 LNESVFKGRNIKV 154
>gi|115475163|ref|NP_001061178.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|75325377|sp|Q6Z1C0.1|NUCL1_ORYSJ RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa Japonica Group]
gi|51449869|gb|AAU01907.1| putative nucleolin [Oryza sativa Indica Group]
gi|113623147|dbj|BAF23092.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|125602459|gb|EAZ41784.1| hypothetical protein OsJ_26324 [Oryza sativa Japonica Group]
Length = 572
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YA 209
P P + ++ E TL N+ +++ ++ +FFQ+VG V +R T E+ +++ +
Sbjct: 297 PKTPASNQSQGTESA--TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFG 354
Query: 210 LVEFSDQACVIPALKLNGTNLKGKTLQM 237
V+F+ AL+L+G +L G+ +++
Sbjct: 355 HVQFASSEEAKKALELHGCDLDGRPVRL 382
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 68 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALV 127
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 128 LNESVFRGRNLKV 140
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 40.0 bits (92), Expect = 2.1, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPAL-KLNGTN 229
N + QE+ DFF VGTV +R RE + +A VEFS+Q A+ +LNG +
Sbjct: 12 NAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNELNGAD 71
Query: 230 LKGKTLQM 237
G+ L++
Sbjct: 72 FNGRQLRV 79
>gi|392576908|gb|EIW70038.1| hypothetical protein TREMEDRAFT_43661 [Tremella mesenterica DSM
1558]
Length = 186
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+E+ FQ GT+N + C + K YA VEF++ + V AL
Sbjct: 77 RSVYIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALV 136
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L +
Sbjct: 137 LNDSMFRGRLLSV 149
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT++ + + + P++L DFF VG V +R + N + A VEF D V A+
Sbjct: 168 RTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQAVPLAIG 227
Query: 225 LNGTNLKG 232
L G L G
Sbjct: 228 LTGQRLLG 235
>gi|390603148|gb|EIN12540.1| hypothetical protein PUNSTDRAFT_81810 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1034
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 131 PNQVISTHDPVLVQHGLPQYPPLPITYDTKKI--EEI------RRTLVAINIEESVSPQE 182
PN V++T V+ + P +T D K+I EEI + TL N E Q
Sbjct: 663 PNAVVAT-----VEFNERESVPAALTKDKKRIHGEEIAVHLAWQSTLYITNFPEGTDDQA 717
Query: 183 LVDFFQKVGTVNYIRFCTRE-NDTNKYALVEFSDQACVIPALKLNGTNLK-GKTLQMFHS 240
+ F K GT+ +R+ +++ T ++ V+F+ +L+L+G L+ G L + S
Sbjct: 718 IRGLFSKYGTIFDVRWPSKKFKSTRRFCYVQFTSPDAAKASLELHGRELEPGMPLSVLIS 777
Query: 241 TQSIQKPEAKSNEAAQREI 259
+K +N A REI
Sbjct: 778 NPERRKERTDAN-ADDREI 795
>gi|6322191|ref|NP_012266.1| Sgn1p [Saccharomyces cerevisiae S288c]
gi|731904|sp|P40561.1|SGN1_YEAST RecName: Full=RNA-binding protein SGN1
gi|557850|emb|CAA86203.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151943159|gb|EDN61494.1| cytoplasmic RNA-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406222|gb|EDV09489.1| RNA-binding protein SGN1 [Saccharomyces cerevisiae RM11-1a]
gi|285812648|tpg|DAA08547.1| TPA: Sgn1p [Saccharomyces cerevisiae S288c]
gi|346228212|gb|AEO21089.1| SGN1 [synthetic construct]
gi|349578952|dbj|GAA24116.1| K7_Sgn1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298723|gb|EIW09819.1| Sgn1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 250
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT--NKYALVEFSDQAC 218
++E R++ NI V+P+++ D F+ G + I N Y +EF A
Sbjct: 58 QLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAY 117
Query: 219 VIPALKLNGTNLKGKTL 235
AL+LNG LKGK +
Sbjct: 118 REKALQLNGGELKGKKI 134
>gi|255581746|ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein, putative [Ricinus communis]
Length = 218
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACV 219
K E R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + +
Sbjct: 84 KEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAI 143
Query: 220 IPALKLNGTNLKGKTLQ 236
AL LN + L G+ L+
Sbjct: 144 QEALLLNESELHGRQLK 160
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + + + ++L +FF VG V +R C + A +EF D V AL
Sbjct: 169 RTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFRDPESVALALG 228
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 229 LSGQRLLGIPISVQHT 244
>gi|145353373|ref|XP_001420989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357398|ref|XP_001422906.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581225|gb|ABO99282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583150|gb|ABP01265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 183
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 152 PLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQ-KVGTVNYIRFCTRENDTNKYAL 210
PL + + +++E RT+ N++++V L F+ + G VN + + N A
Sbjct: 89 PLLLPQNEREVESCARTIYVANVDKTVDSHALKLLFEDRAGPVNRLHLQVKNNAVANVAF 148
Query: 211 VEFSDQACVIPALKLNGTNLKGKTLQMFHS 240
VEF D V AL L G L + +++ S
Sbjct: 149 VEFVDLESVGTALHLTGEQLGNRMIRVSAS 178
>gi|125560429|gb|EAZ05877.1| hypothetical protein OsI_28114 [Oryza sativa Indica Group]
Length = 572
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YA 209
P P + ++ E TL N+ +++ ++ +FFQ+VG V +R T E+ +++ +
Sbjct: 297 PKTPASNQSQGTESA--TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFG 354
Query: 210 LVEFSDQACVIPALKLNGTNLKGKTLQM 237
V+F+ AL+L+G +L G+ +++
Sbjct: 355 HVQFASSEEAKKALELHGCDLDGRPVRL 382
>gi|227204205|dbj|BAH56954.1| AT4G10610 [Arabidopsis thaliana]
Length = 206
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEF 213
P T ++ E IRRT+ +I++ V+ ++L F G V R C N ++A +EF
Sbjct: 137 PRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEF 196
Query: 214 SDQACV 219
+D+ +
Sbjct: 197 TDEGII 202
>gi|357117778|ref|XP_003560639.1| PREDICTED: protein vip1-like [Brachypodium distachyon]
Length = 284
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++ + V+V NI+ A + ++ F + G +E + + S S++ YV F D +
Sbjct: 1 MEVRTVKVGNISLSALKREITEFFSFSGDIEYVEMQ------SESEWSQLAYVTFKDSQG 54
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDE 98
+ L+ +DR++++TP + ++P E
Sbjct: 55 ADTAVLLSGATIVDRSVIITPVENYQLPPE 84
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALV 211
P +++ ++ E R++ N++ S P+EL F + G +N + +N + YA +
Sbjct: 55 PDSHEMEQEEINNRSIFVGNVDYSTQPEELQSLFSECGVINRVTILVNKNTGHSKGYAYI 114
Query: 212 EFSDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
EF+D + V AL L+ + K + +++ ++I
Sbjct: 115 EFADPSSVRTALSLSESFFKKRQIKVCSKRRNI 147
>gi|297737935|emb|CBI27136.3| unnamed protein product [Vitis vinifera]
Length = 691
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 154 PITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALV 211
P T T ++E +TL N+ SV +++ FF+ G V +RF + + K + V
Sbjct: 434 PKTPATPQVESTGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHV 493
Query: 212 EFSDQACVIPALKLNGTNLKGKTLQM 237
EF+ ALK+NG +L G+ +++
Sbjct: 494 EFATPEAAQKALKMNGKDLLGRAVRL 519
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT++ + + + P++L DFF VG V +R + N + A VEF D V A+
Sbjct: 152 RTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQAVPLAIG 211
Query: 225 LNGTNLKG 232
L G L G
Sbjct: 212 LTGQRLLG 219
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + + + ++L +FF VG V +R C + A +EF D V AL
Sbjct: 189 RTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKDPESVALALG 248
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA 255
L+G L G + S+Q +A+ N A
Sbjct: 249 LSGQRLLGIPI-------SVQHTQAEKNRMA 272
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 67 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 127 LNESVFRGRNLKV 139
>gi|357152013|ref|XP_003575980.1| PREDICTED: protein vip1-like [Brachypodium distachyon]
Length = 303
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLN 226
RT+ NI S + + +FF G + Y+ RE++T++ A V F + AL L+
Sbjct: 52 RTIKVTNISGSATADNIKEFFSFSGDIEYVEM-RRESETSQVAYVTFEEFHGADTALLLS 110
Query: 227 GTNLKGKTLQMFHSTQSIQKPEAKSNE---AAQREIEEAMSRVKEAQNMISAAIDPVIGI 283
G ++ ++ + PEA ++ + R EA VK+A+ ++S + +
Sbjct: 111 GASISDASVNITPVEDYDLPPEAYTHAEELGSPRTPTEAA--VKKAEEVVSTMLARGF-V 167
Query: 284 LSKD--KKKSHSPVRHLVIVLIVVDVA-LDLALEIGDDLEVVVRDV 326
LSKD K+ RH ++ VA LD + D + VR V
Sbjct: 168 LSKDALKRARSFDDRHQLLSSASARVARLDRRFGLSDKFTLAVRGV 213
>gi|170594313|ref|XP_001901908.1| RNA recognition motif. [Brugia malayi]
gi|158590852|gb|EDP29467.1| RNA recognition motif [Brugia malayi]
Length = 150
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 162 IEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKY-----ALVEFSDQ 216
I+ + ++ N+ S +EL D F GT+ I FC ++ TN+ A +EF D
Sbjct: 47 IKTCKHSVYVNNLNIRTSKKELEDHFASCGTIIIIEFC-KDTVTNRCIGMNSARIEFKDI 105
Query: 217 ACVIPALKLNGTNLKGKTL 235
A + A+ L GT LKG +
Sbjct: 106 AAKLKAMDLAGTFLKGSKI 124
>gi|67469403|ref|XP_650680.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56467330|gb|EAL45294.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449708457|gb|EMD47913.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 135
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N+E + + +EL D F++ G V + + T YA +EF + V A+K
Sbjct: 39 RSVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQFTQTTMGYANIEFKNSNAVEKAIK 98
Query: 225 LNGTNLKGKTLQM 237
L GTNL G+ +++
Sbjct: 99 LTGTNLNGRYIEV 111
>gi|307110149|gb|EFN58385.1| hypothetical protein CHLNCDRAFT_56825 [Chlorella variabilis]
Length = 1521
Score = 40.0 bits (92), Expect = 2.3, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFSDQACVIPALK-LNGT 228
N+ ++ Q+++D F +VG V ++R T E DT K + +EF D A++ L+G
Sbjct: 1078 NLSYDLTDQDVIDHFSQVGPVKHVRIVT-ERDTGKPRGFGFIEFFDIPTAESAIRNLSGK 1136
Query: 229 NLKGKTLQMFHS 240
+ KG+T+++ ++
Sbjct: 1137 DFKGRTIRIVYA 1148
>gi|320582005|gb|EFW96224.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Ogataea parapolymorpha DL-1]
Length = 156
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 148 PQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR--FCTRENDT 205
PQ P L + + E R++ N++ S P +L + G +N I +
Sbjct: 8 PQQPRLAPNQPSNQQEIDSRSVYLGNVDYSALPGDLKELLDDCGVINRITILYDKHTGKP 67
Query: 206 NKYALVEFSDQACVIPALKLNGTNLKGKTL 235
YA VEF A+ +NGT +G+TL
Sbjct: 68 RGYAFVEFETHEGAQKAVAMNGTEFRGRTL 97
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT+ + + + P++L +FF VG V +R + N + A VEF DQ+ V A+
Sbjct: 154 RTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDQSSVPLAIG 213
Query: 225 LNGTNLKG 232
L G + G
Sbjct: 214 LTGQKVLG 221
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVI 220
E RT+ + + + P++L +FF VG V +R + N + A VEF DQ+ V
Sbjct: 148 ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFLDQSSVP 207
Query: 221 PALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA 255
A+ L G + G + +Q +A+ N AA
Sbjct: 208 LAIGLTGQKVLGVPI-------IVQASQAEKNRAA 235
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 156 TYDTKKIEEIR-----RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-Y 208
T D EE R R++ N++ +P+EL F+ GT+N + C + K +
Sbjct: 64 TGDASMTEEEREAIDSRSIYVGNVDYGATPEELQQLFKDCGTINRVTILCDKFTRHPKGF 123
Query: 209 ALVEFSDQACVIPALKLNGTNLKGKTL 235
A VEFS+ V A+ +N T +G+ +
Sbjct: 124 AYVEFSEPTFVANAISMNETLFRGRMI 150
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALV 211
P +++ ++ E R++ N++ S P+EL F + G +N + +N + YA +
Sbjct: 53 PDSHEMEQEEINNRSIFVGNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYI 112
Query: 212 EFSDQACVIPALKLNGTNLKGKTLQMFHSTQSI 244
EF+D + V AL L+ + K + +++ ++I
Sbjct: 113 EFADPSSVRTALSLSESFFKKRQIKVCSKRRNI 145
>gi|326512910|dbj|BAK03362.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 131
Score = 39.7 bits (91), Expect = 2.4, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 172 INIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKLNGTNL 230
+ ++ + +P+E+ FQ GTVN + T + K +A VEF +Q V AL LN + L
Sbjct: 10 LQVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAVQEALNLNESEL 69
Query: 231 KGKTLQM 237
G+ +++
Sbjct: 70 HGRQIKV 76
>gi|238006378|gb|ACR34224.1| unknown [Zea mays]
gi|413952637|gb|AFW85286.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFS 214
T K E R++ N++ + +P+E+ F GTVN + T + K +A VEF
Sbjct: 68 TTSENKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFV 127
Query: 215 DQACVIPALKLNGTNLKGKTLQ 236
+ V A+KLN + L G+ L+
Sbjct: 128 EVEAVQEAIKLNESELHGRQLK 149
>gi|351723063|ref|NP_001235474.1| uncharacterized protein LOC100527139 [Glycine max]
gi|255631638|gb|ACU16186.1| unknown [Glycine max]
Length = 214
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R + N++ + +P+E+ FQ GTVN + T + K +A VEF++ V AL L
Sbjct: 90 RPIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFAEIDAVQNALLL 149
Query: 226 NGTNLKGKTLQM 237
N + L G+ L++
Sbjct: 150 NESELHGRQLKV 161
>gi|296815242|ref|XP_002847958.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
gi|238840983|gb|EEQ30645.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
Length = 708
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 161 KIEEIRRTLVAI---NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFS 214
K EE++ I N+E+ V+ +E F+K G + +R+N+T K + V FS
Sbjct: 158 KFEEMKANFTNIYVKNVEQDVTDEEFRALFEKYGDITSATL-SRDNETGKSRGFGFVNFS 216
Query: 215 DQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEA--KSNEAAQREIEEA 262
D A++ LN LKG+ L + + + ++ E K EAA+ IE+A
Sbjct: 217 DHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAAR--IEKA 265
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVI 220
E RT+ + + + P++L +FF VG V +R + N + A VEF DQ+ V
Sbjct: 122 ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDQSSVP 181
Query: 221 PALKLNGTNLKG 232
A+ L G + G
Sbjct: 182 LAIGLTGQRVLG 193
>gi|71667313|ref|XP_820607.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885958|gb|EAN98756.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 424
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ + L F + G + R+ D +Y ++F+ + A+K NG L G
Sbjct: 15 NIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFTLAG 74
Query: 233 KTLQMFHSTQSIQKPEA 249
+ +++ S ++ +PE
Sbjct: 75 RKIKVGVSKGNVGRPEG 91
>gi|401429538|ref|XP_003879251.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495501|emb|CBZ30806.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 455
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 173 NIEESVSPQELVDFFQKVG--TVNYIRFCT-RE-NDTNKYALVEFSDQACVIPALKLNGT 228
N+ + + +++ FFQ+ G V +R RE D + VEF + V PA++ G
Sbjct: 276 NVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGFGYVEFMHASSVQPAIETRGD 335
Query: 229 NLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSR 265
L G+ L++ H +S + A N +R E A R
Sbjct: 336 KLNGRELRIVHVNKSKEVKVATKNRREKRRGEHAGGR 372
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTV+ + T + K +A VEF + + AL+L
Sbjct: 92 RSVFVGNVDYACTPEEVQQHFQSCGTVHRVTILTDKFGQPKGFAYVEFVEVEAIQEALQL 151
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 152 NESELHGRQLK 162
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + + + ++L +FF VG V +R C + A VEF D V AL
Sbjct: 11 RTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALG 70
Query: 225 LNGTNLKG 232
L+G L G
Sbjct: 71 LSGQKLLG 78
>gi|291403539|ref|XP_002718108.1| PREDICTED: RNA binding motif protein 23 isoform 1 [Oryctolagus
cuniculus]
Length = 410
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT++ + + + P++L DFF VG V +R + N + A VEF D V A+
Sbjct: 134 RTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQAVPLAIG 193
Query: 225 LNGTNLKG 232
L G L G
Sbjct: 194 LTGQRLLG 201
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ I + + V ++L +FF VG V +R C + A +EF D V AL
Sbjct: 255 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRMITCNKTKRFKGIAYIEFEDPESVSLALG 314
Query: 225 LNGTNLKGKTLQMFHS 240
L+G L G + + H+
Sbjct: 315 LSGQRLLGVPIMVQHT 330
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 70 RSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALV 129
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 130 LNESVFRGRNLKV 142
>gi|299742799|ref|XP_001832784.2| RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298405354|gb|EAU89029.2| RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 257
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 12 KVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGI 71
K++ V N+ T+DQ+ TLF + ++RL P +D I +V+F DE G+
Sbjct: 183 KILFVQNLPESVTKDQLTTLFSQYPNLYEVRLIPTKKD--------IAFVEFLDEASSGV 234
Query: 72 SQHLTNTVFID 82
++ + ID
Sbjct: 235 AKDALHNFKID 245
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA 255
LN +L G+ L++ ++ K E K+ +A+
Sbjct: 76 NLNAFDLNGRPLRVDNAASEKSKEELKNLQAS 107
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 163 EEIR-RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACV 219
EEI R++ N++ S P+EL F + G +N + +N + YA +EF+D + V
Sbjct: 66 EEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSV 125
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+ + K + +++ ++I
Sbjct: 126 RTALSLSESFFKKRQIKVCSKRRNI 150
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 88 RSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVETEAVQEALLL 147
Query: 226 NGTNLKGKTLQ 236
+ + L G+ L+
Sbjct: 148 SESELHGRQLK 158
>gi|323354513|gb|EGA86350.1| Sgn1p [Saccharomyces cerevisiae VL3]
gi|365765027|gb|EHN06542.1| Sgn1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 141
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT--NKYALVEFSDQAC 218
++E R++ NI V+P+++ D F+ G + I N Y +EF A
Sbjct: 58 QLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAY 117
Query: 219 VIPALKLNGTNLKGK 233
AL+LNG LKGK
Sbjct: 118 REKALQLNGGELKGK 132
>gi|323337227|gb|EGA78481.1| Sgn1p [Saccharomyces cerevisiae Vin13]
Length = 166
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDT--NKYALVEFSDQAC 218
++E R++ NI V+P+++ D F+ G + I N Y +EF A
Sbjct: 58 QLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAY 117
Query: 219 VIPALKLNGTNLKGK 233
AL+LNG LKGK
Sbjct: 118 REKALQLNGGELKGK 132
>gi|71660275|ref|XP_821855.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70887244|gb|EAO00004.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 422
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ + L F + G + R+ D +Y ++F+ + A+K NG L G
Sbjct: 15 NIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFTLAG 74
Query: 233 KTLQMFHSTQSIQKPEA 249
+ +++ S ++ +PE
Sbjct: 75 RKIKVGVSKGNVGRPEG 91
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KLNG 227
LV N+ S Q+L D +K G V ++ T +VEF+ ++ + A+ KL+G
Sbjct: 84 LVVENLSSRTSWQDLKDLMRKAGEVTFV---DAHRPTKNEGVVEFASRSDMKNAISKLDG 140
Query: 228 TNLKGKTLQMF 238
T L G+ L+MF
Sbjct: 141 TELNGRKLKMF 151
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 34/208 (16%)
Query: 148 PQYPPLPITY-DTKKIEEIR--RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RE 202
P+Y P P Y D++ E R RT+ + + S+ P++L +FF +V V +R T +
Sbjct: 208 PRYSP-PRNYVDSELSPEERDARTVFCMQLARSIRPRDLEEFFSEVAKVRDVRIITDSKT 266
Query: 203 NDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEA 262
+ A VEF D V AL L+G L G + +Q +++ N A + A
Sbjct: 267 RRSKGIAYVEFWDLDSVPLALSLHGKRLLGAPI-------VVQPTQSEKNRMASAMLATA 319
Query: 263 MSRVKE-------------AQNMISAAIDPVIGI----LSKDKKKSHSPVRHLVIVLIVV 305
++ + + M+ +P I L KD + S S R +
Sbjct: 320 FTQNRGPMKLYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRS--RGYGFITFYN 377
Query: 306 DVALDLALEIGDDLEVVVR--DVGHVRE 331
A+E + E+ R VGHV E
Sbjct: 378 SEDAKRAMEQLNGFELAGRPMKVGHVTE 405
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + +A VEF + V A+ L
Sbjct: 47 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVML 106
Query: 226 NGTNLKGKTLQM 237
N + L G+ L++
Sbjct: 107 NESELHGRQLKV 118
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 39.7 bits (91), Expect = 2.7, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYA 209
P P K E R++ N++ S +P+EL FQ GTVN + T + + +A
Sbjct: 34 PGGPSVDAAAKEEADSRSVYVGNVDYSCTPEELQMHFQSCGTVNRVTILTDKMGNPKGFA 93
Query: 210 LVEFSDQACVIPALKLNGTNLKGKTLQM 237
+EF + V A L+G+ L+ + +++
Sbjct: 94 YIEFLEADAVTNACLLDGSELRNRAIKV 121
>gi|407846855|gb|EKG02815.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 422
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ + L F + G + R+ D +Y ++F+ + A+K NG L G
Sbjct: 15 NIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFTLAG 74
Query: 233 KTLQMFHSTQSIQKPEA 249
+ +++ S ++ +PE
Sbjct: 75 RKIKVGVSKGNVGRPEG 91
>gi|406603845|emb|CCH44661.1| hypothetical protein BN7_4230 [Wickerhamomyces ciferrii]
Length = 180
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+EL FQ VG +N + + +A +EF++ + V+ +L
Sbjct: 70 RSIYVGNVDYDSSPEELQKHFQSVGVINRVTILLNKFTGQPKGFAYIEFAEPSSVVNSLV 129
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 130 LNDSVFRGRNLKV 142
>gi|226532872|ref|NP_001149957.1| polyadenylate-binding protein 2 [Zea mays]
gi|195635741|gb|ACG37339.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFS 214
T K E R++ N++ + +P+E+ F GTVN + T + K +A VEF
Sbjct: 68 TTSENKEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFV 127
Query: 215 DQACVIPALKLNGTNLKGKTLQ 236
+ V A+KLN + L G+ L+
Sbjct: 128 EVEAVQEAIKLNESELHGRQLK 149
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KL 225
RTL N++ SVS + L F ++G V + RE + YA VEF++ C AL +
Sbjct: 8 RTLYVGNLDSSVSEELLCALFSQIGAVKGCKI-IREPGNDPYAFVEFTNHQCAATALAAM 66
Query: 226 NGTNLKGKTLQMFHSTQSIQKPE 248
N + K +++ +T +P+
Sbjct: 67 NKRSFLNKEMKVNWATSPGNQPK 89
>gi|407407545|gb|EKF31308.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 425
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
NI+ SV+ + L F + G + R+ D +Y ++F+ + A+K NG L G
Sbjct: 15 NIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFTLAG 74
Query: 233 KTLQMFHSTQSIQKPEA 249
+ +++ S ++ +PE
Sbjct: 75 RKIKVGVSKGNVGRPEG 91
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKYALVEFSDQACVI 220
EE++R++ N++ EL D F+ G++N I R +A +EF + V
Sbjct: 107 EEMKRSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVE 166
Query: 221 PALKLNGTNLKGKTLQ 236
ALK +G +G+ ++
Sbjct: 167 TALKFDGAMFRGRQIK 182
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KLNG 227
L+ N+ +S Q+L D +K G V ++ R N +VEF+ ++ + A+ K +G
Sbjct: 115 LIVENLSSRISWQDLKDMMRKAGEVTFVD-AHRPNKNE--GVVEFASRSDMKSAISKFDG 171
Query: 228 TNLKGKTLQMFH-STQSIQKP 247
T L G+ L++F S +S+Q P
Sbjct: 172 TELNGRKLKVFEDSRKSVQPP 192
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 67 RSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQALV 126
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ L++
Sbjct: 127 LNESVFRGRNLKV 139
>gi|392558318|gb|EIW51507.1| RNA-binding protein Prp24 [Trametes versicolor FP-101664 SS1]
Length = 1049
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 152 PLPITYDTKKI--EEI------RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE- 202
P +T D K++ +EI R TL N E + F K G + +R+ +++
Sbjct: 688 PAALTKDKKRVRGKEIAVHLAWRSTLYVTNFPEDADDTFIRTLFGKYGEIFDVRWPSKKF 747
Query: 203 NDTNKYALVEFSDQACVIPALKLNGTNL-KGKTLQMFHSTQSIQKPEAKSNEAAQREI 259
T ++ V+++ AL+LNGT++ +G+ L ++ S +K E ++A +REI
Sbjct: 748 KSTRRFCYVQYTSPTSAENALELNGTDMEEGRRLSVYISNPERRK-ERTDSDANEREI 804
>gi|340923936|gb|EGS18839.1| hypothetical protein CTHT_0054490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 115
Score = 39.7 bits (91), Expect = 3.0, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R L N+ +V+P+EL D F K G + +R N T A V + D A
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASN-TKGTAFVVYEDVMDAKTAC 68
Query: 224 -KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEEAMSR 265
KLNG N + + L ++H + + + +K + A++E E + +
Sbjct: 69 DKLNGYNFQNRYLVVLYHQPEKMNR--SKEDLDARKENLERLKK 110
>gi|225558865|gb|EEH07148.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 150
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 66 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQ 236
LN + +G+ L+
Sbjct: 126 LNESVFRGRNLK 137
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + +A VEF++ + V AL
Sbjct: 73 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALV 132
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 133 LNESVFKGRNIKV 145
>gi|66475216|ref|XP_627424.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
Length = 262
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT--RENDTNKYALVEFSDQACVI 220
EE++R++ N++ EL D F+ G++N I R +A +EF + V
Sbjct: 106 EEMKRSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMPKGFAYLEFCEPEAVE 165
Query: 221 PALKLNGTNLKGKTLQ 236
ALK +G +G+ ++
Sbjct: 166 TALKFDGAMFRGRQIK 181
>gi|225454892|ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 99 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 158
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 159 NESELHGRQLK 169
>gi|159476716|ref|XP_001696457.1| poly(A) binding protein [Chlamydomonas reinhardtii]
gi|158282682|gb|EDP08434.1| poly(A) binding protein [Chlamydomonas reinhardtii]
Length = 136
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQ 216
+ +K E R++ N++ +P+EL F GTVN + T + + +A VEF +
Sbjct: 45 EAEKAEVDSRSIFVGNVDYGCTPEELQQHFASCGTVNRVTILTDKFGNPKAFAYVEFLEV 104
Query: 217 ACVIPALKLNGTNLKGKTLQMFHSTQSI 244
V A+ L+ + L+G+ +++ H ++
Sbjct: 105 DAVNNAVLLDNSELRGRQIKVSHKRTNV 132
>gi|156845624|ref|XP_001645702.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156116369|gb|EDO17844.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E + L N+++S++ L +FQ G + ++ +N+ YA VE+S A
Sbjct: 73 ETSDKILYVGNLDKSINEDILKQYFQVGGPITNVKVINDKNNEANYAFVEYSQHHDASIA 132
Query: 223 LK-LNGTNLKGKTLQMFHSTQSIQK 246
LK LNG ++ TL++ + QS Q
Sbjct: 133 LKTLNGKQIENNTLKINWAFQSQQN 157
>gi|359472731|ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
Length = 664
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 154 PITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALV 211
P T T ++E +TL N+ SV +++ FF+ G V +RF + + K + V
Sbjct: 388 PKTPATPQVESTGSKTLFVGNLSFSVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHV 447
Query: 212 EFSDQACVIPALKLNGTNLKGKTLQM 237
EF+ ALK+NG +L G+ +++
Sbjct: 448 EFATPEAAQKALKMNGKDLLGRAVRL 473
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ +P+E+ FQ GT+N + C + K +A VEF+D + V A+
Sbjct: 98 RSIYVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFADPSLVANAMV 157
Query: 225 LNGTNLKGKTLQ 236
LN + +G+ ++
Sbjct: 158 LNESLFRGRLIK 169
>gi|255539953|ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 231
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 105 RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLL 164
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 165 NESELHGRQLK 175
>gi|301097894|ref|XP_002898041.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
gi|262106486|gb|EEY64538.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
Length = 225
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 179 SPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
+P+EL FQ GT+N + C + K YA +EF+ V AL LN T +G+ L+
Sbjct: 116 TPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASHDAVESALLLNDTMFRGRQLK 175
Query: 237 MFHSTQSIQ 245
+ Q+++
Sbjct: 176 VTPKRQNVR 184
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + + + ++L +FF VG V +R C + A +EF D V AL
Sbjct: 164 RTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVTLALG 223
Query: 225 LNGTNLKG 232
L+G L G
Sbjct: 224 LSGQKLLG 231
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRF--CTRENDTNKYALVEFSDQACVIPALK 224
RT+ + + + + ++L +FF VG V +R C + A +EF D V AL
Sbjct: 143 RTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVTLALG 202
Query: 225 LNGTNLKG 232
L+G L G
Sbjct: 203 LSGQKLLG 210
>gi|302786636|ref|XP_002975089.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
gi|300157248|gb|EFJ23874.1| hypothetical protein SELMODRAFT_102545 [Selaginella moellendorffii]
Length = 224
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 93 RSVYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNALIL 152
Query: 226 NGTNLKGKTLQ 236
N + L G+ ++
Sbjct: 153 NESELHGRPIK 163
>gi|148679903|gb|EDL11850.1| splicing factor, arginine/serine-rich 11, isoform CRA_a [Mus
musculus]
gi|148679907|gb|EDL11854.1| splicing factor, arginine/serine-rich 11, isoform CRA_a [Mus
musculus]
Length = 293
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 25/28 (89%)
Query: 252 NEAAQREIEEAMSRVKEAQNMISAAIDP 279
++ + +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 22 SDTSSKEIEEAMKRVREAQSLISAAIEP 49
>gi|70943756|ref|XP_741887.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520548|emb|CAH80503.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 562
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 147 LPQYPPLPITYDTK--------KIEEIRRT----LVAINIEESVSPQELVDFFQKVGTVN 194
Y P Y+ K K E I + +V NI+E VS Q+L DF ++VG+VN
Sbjct: 226 YNNYKSDPRNYENKYSRNYSDNKFESIEKKNSLRIVVKNIDEKVSWQDLKDFGREVGSVN 285
Query: 195 YIR--FCTRENDTNKYALVEFSDQACVIPALK-LNGTNLKG 232
Y + N+ Y ++E+ + + A++ LNG G
Sbjct: 286 YANVIYNNNGNNKEWYGIIEYYNYETMKRAVEVLNGKKFNG 326
>gi|393215597|gb|EJD01088.1| polyadenylate-binding protein 2 [Fomitiporia mediterranea MF3/22]
Length = 201
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ GT+N + C + K YA VEF++ + V A
Sbjct: 83 RSVYVGNVDYGASPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSFVETAQT 142
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 143 LNESLFKGRLIKV 155
>gi|357476333|ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355509507|gb|AES90649.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 199
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+++ FQ GTVN + T + K YA VEF + V AL L
Sbjct: 68 RSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAVQEALLL 127
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 128 NESELHGRQLK 138
>gi|297812631|ref|XP_002874199.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
gi|297320036|gb|EFH50458.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK 224
I+RT+ +I++ V+ ++L F G V R C ++A +EF+D AL+
Sbjct: 128 IKRTVYVSDIDQQVTEEQLASLFLSCGQVVDCRICGDHKSILRFAFIEFTDAEGARSALR 187
Query: 225 LNGT 228
+GT
Sbjct: 188 KSGT 191
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 163 EEIR-RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACV 219
EEI R++ N++ S P+EL F + G +N + +N + YA +EF+D + V
Sbjct: 24 EEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSV 83
Query: 220 IPALKLNGTNLKGKTLQMFHSTQSI 244
AL L+ + K + +++ ++I
Sbjct: 84 RTALSLSESFFKKRQIKVCSKRRNI 108
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREN--DTNKYALVEFSDQACVIPALK 224
RT+ A N+ ++L +FF K G + ++ N + +A +E++++A ++ A+
Sbjct: 126 RTVFAYNLPLKAEERDLFEFFSKAGPIEDVKIIMDRNTRKSKGFAYIEYTNKADIVTAMA 185
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSN---EAAQ 256
L G L G+ + ++ EA+ N EAAQ
Sbjct: 186 LTGQILMGQAVM-------VKSSEAEKNLAWEAAQ 213
>gi|292623744|ref|XP_001923471.2| PREDICTED: hypothetical protein LOC100151453 [Danio rerio]
Length = 385
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 138 HDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR 197
H V +H P P+ ++ IE R+TL+ N+ V+ Q+L++ F +G+++ ++
Sbjct: 172 HIYVTFEHSGRDQQPDPVVPTSRFIE--RKTLLVSNLHPMVTEQQLIEKFGALGSISTVQ 229
Query: 198 FCTRENDTNKYALVEFSDQACVIPALK-LNGTNLKGKTL 235
C + YA V F + + A K LN T+L K L
Sbjct: 230 VCRNNIISPAYAFVTFHHRRDAMRAQKALNFTDLLNKPL 268
>gi|218197814|gb|EEC80241.1| hypothetical protein OsI_22184 [Oryza sativa Indica Group]
Length = 230
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVE 212
P T D + R ++A ++ + +P+E+ F GTVN + T + K +A VE
Sbjct: 96 PSTNDVS-LRSWHRVMIAQRVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVE 154
Query: 213 FSDQACVIPALKLNGTNLKGKTLQ 236
F + V A+KLN + L G+ ++
Sbjct: 155 FLEVEAVQEAVKLNESELHGRQIK 178
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKY---ALVEFSDQACVIPAL 223
RT+ + + + + ++L DFF VG V +R +N T K A VEF D V A+
Sbjct: 175 RTVFCMQLSQRIRARDLEDFFSAVGKVRDVRMIV-DNKTRKSKGIAYVEFFDLESVPLAM 233
Query: 224 KLNGTNLKG 232
LNG L G
Sbjct: 234 GLNGQKLFG 242
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+++ FQ G++N + + YA VEF + + V AL
Sbjct: 66 RSIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ L++
Sbjct: 126 LNESVFKGRNLKV 138
>gi|294658345|ref|XP_460681.2| DEHA2F07436p [Debaryomyces hansenii CBS767]
gi|202953061|emb|CAG89018.2| DEHA2F07436p [Debaryomyces hansenii CBS767]
Length = 940
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 95/255 (37%), Gaps = 73/255 (28%)
Query: 13 VVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCVGIS 72
+ V+N P + ++++ +F +G V +R + + S R CYV++ S
Sbjct: 636 TLWVSNFPPSFSHERVKNIFEQVGTVVSIRFPSLKSNQS----RRFCYVEY-------AS 684
Query: 73 QHLTNTVFIDRALVVTPYNSGEIPDE--QRALEIAAQQQGPNSGEPKLPAHVTNQIEGVP 130
L + L ++ Y E DE + + PNS + K +T +
Sbjct: 685 PELAH-------LAISNYQGKEFEDEISNKRYRLVVDMSKPNSKKTKTDTAITER----- 732
Query: 131 PNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKV 190
+ +Q+ +N + + + +L FQ +
Sbjct: 733 ---------EIYIQN--------------------------LNFK-TTTESDLESLFQTI 756
Query: 191 GTVNYIRFCTRE------NDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMF------ 238
GT++ ++ E N N YA V F + AL+LNGT L + + +
Sbjct: 757 GTIDSVKVPLNEKMKNQGNINNGYAFVVFKSEVAAKNALQLNGTTLHDRKISVSQSQAKK 816
Query: 239 HSTQSIQKPEAKSNE 253
H+ +S + P A SN+
Sbjct: 817 HNNKSEKDPAAISNQ 831
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+E+ FQ G++N + + +A VEF++ + V AL
Sbjct: 93 RSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQALV 152
Query: 225 LNGTNLKGKTLQM 237
LN + KG+ +++
Sbjct: 153 LNESVFKGRNIKV 165
>gi|388580316|gb|EIM20632.1| hypothetical protein WALSEDRAFT_33249 [Wallemia sebi CBS 633.66]
Length = 727
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 155 ITYDTKKIEEIR--------RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN 206
+T D K+IE+I TL N E +EL F+ GT+ R+ +R TN
Sbjct: 386 LTKDKKRIEDIEINVVMGWSATLYVTNFPERTKDEELRALFEPYGTIFDTRWPSRSVKTN 445
Query: 207 -KYALVEFSDQACVIPALKLNG 227
++A V F D +L+LNG
Sbjct: 446 RRFAYVTFLDPTSAQASLELNG 467
>gi|388498186|gb|AFK37159.1| unknown [Lotus japonicus]
Length = 217
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V A+ L
Sbjct: 93 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQNAVML 152
Query: 226 NGTNLKGKTLQ 236
N L G+ L+
Sbjct: 153 NELELHGRQLK 163
>gi|351725805|ref|NP_001237617.1| uncharacterized protein LOC100527545 [Glycine max]
gi|255632582|gb|ACU16641.1| unknown [Glycine max]
Length = 214
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V AL L
Sbjct: 90 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 149
Query: 226 NGTNLKGKTLQM 237
N + L G+ L++
Sbjct: 150 NESELHGRQLKV 161
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVI 220
E RRT+ + + +EL+ FF+KVG V + + VEF D++ V
Sbjct: 170 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDESSVA 229
Query: 221 PALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA 255
PA++L G L G + + T++ + +A+++EA+
Sbjct: 230 PAIQLTGQKLLGIPI-IAQLTEAEKNRQARNSEAS 263
>gi|388579255|gb|EIM19581.1| hypothetical protein WALSEDRAFT_48842 [Wallemia sebi CBS 633.66]
Length = 270
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 168 TLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNG 227
++V I + +++V FF G V F ++ T++ A +EF ++ AL LNG
Sbjct: 3 SIVVTKIATGTTDEQIVKFFSFCGKVKSSSF--EQDTTHRTAYIEFERESAARTALLLNG 60
Query: 228 TNLKGKTLQMFHSTQSIQKPEA-------KSNEAAQREIE 260
NL+G +++ S P A K+++AA E++
Sbjct: 61 GNLEGSLIEVSSKEVSNTSPAASPAATTDKASQAAAMEVD 100
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 18 RSVFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKGYGFCEYKDQETALSAMR 77
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAK 250
LNG L G+ L++ ++ K E K
Sbjct: 78 NLNGHELNGRQLRVDNAASEKSKEELK 104
>gi|149026328|gb|EDL82571.1| similar to splicing factor p54, isoform CRA_a [Rattus norvegicus]
gi|149026329|gb|EDL82572.1| similar to splicing factor p54, isoform CRA_a [Rattus norvegicus]
Length = 293
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 25/28 (89%)
Query: 252 NEAAQREIEEAMSRVKEAQNMISAAIDP 279
++ + +EIEEAM RV+EAQ++ISAAI+P
Sbjct: 22 SDTSSKEIEEAMKRVREAQSLISAAIEP 49
>gi|189195646|ref|XP_001934161.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980040|gb|EDU46666.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 207
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ +G++N + + YA VEF++ V AL
Sbjct: 69 RSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHLVNEALV 128
Query: 225 LNGTNLKGKTLQM 237
L+G+ + + L++
Sbjct: 129 LDGSEFRNRNLKV 141
>gi|145348085|ref|XP_001418487.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578716|gb|ABO96780.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQA 217
KK E R++ ++ + +P++L + F GTVN + + D K +A VEF +
Sbjct: 54 AKKQEADARSVYVGQVDYASTPEDLANAFASAGTVNRVTILHDKFDNPKGFAYVEFLEPD 113
Query: 218 CVIPALKLNGTNLKGKTLQM 237
V A+ L+GT ++G+ +++
Sbjct: 114 AVHNAILLDGTEIRGRKIKV 133
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KL 225
RTL N++ SVS + L F ++G V + RE + YA VEF++ C AL +
Sbjct: 8 RTLYVGNLDTSVSEELLCALFSQIGAVKGCKI-IREPGNDPYAFVEFTNHQCAATALAAM 66
Query: 226 NGTNLKGKTLQMFHSTQSIQKPE 248
N + K +++ +T +P+
Sbjct: 67 NKRSFLNKEMKVNWATSPGNQPK 89
>gi|401400261|ref|XP_003880750.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
gi|325115161|emb|CBZ50717.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
Length = 285
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSD 215
DT +++ RR++ N++ S +P EL + F+ GT+N I + YA +EF+
Sbjct: 139 DTDEVD--RRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNS 196
Query: 216 QACVIPALKLNGTNLKGKTLQMFHSTQSI 244
+A V A+ L+ T K + +++ ++I
Sbjct: 197 EAAVQNAILLSDTVFKQRQIKVVAKRKNI 225
>gi|83032973|ref|XP_729274.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23486584|gb|EAA20839.1| RNA recognition motif [Plasmodium yoelii yoelii]
Length = 77
Score = 39.3 bits (90), Expect = 3.8, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALKLNGTNL 230
N++ S P+EL F + G +N + +N + YA +EF+D + V AL L+ +
Sbjct: 8 NVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPSSVRTALSLSESFF 67
Query: 231 KGKTLQM 237
K + +++
Sbjct: 68 KKRQIKV 74
>gi|440299935|gb|ELP92460.1| splicing factor, arginine/serine-rich, putative [Entamoeba invadens
IP1]
Length = 334
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQA 217
D K ++R+T+ NI ++ Q+L+ FF+K G + + E + +EF +
Sbjct: 126 DQKVSGKLRKTVCVRNIG-NLDEQKLIQFFEKCGNIRLLESSAPE-VVARQVFIEFETEE 183
Query: 218 CVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
+ AL+L+G NL G+ +++ S ++I+
Sbjct: 184 SALRALQLDGANLAGRVVRVSVSNKTIR 211
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALKLNGTNL 230
N++ SV+P+EL F G+VN + C + K +A +EFS+ + V AL LNG+ L
Sbjct: 61 NVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSML 120
Query: 231 KGKTLQ 236
+ L+
Sbjct: 121 HERPLK 126
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT+ + + + P++L DFF +G V+ +R + N + A VEF D V A+
Sbjct: 166 RTVFCMQLAARIRPRDLEDFFSAIGKVHDVRIISDRNSRRSKGIAYVEFCDIQSVPLAIG 225
Query: 225 LNGTNLKG 232
L G L G
Sbjct: 226 LTGQRLLG 233
>gi|224134274|ref|XP_002321779.1| predicted protein [Populus trichocarpa]
gi|222868775|gb|EEF05906.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GTVN + T + K +A VEF + V A+ L
Sbjct: 97 RSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFIEVDAVQNAVLL 156
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 157 NESELHGRQLK 167
>gi|348679138|gb|EGZ18955.1| hypothetical protein PHYSODRAFT_409429 [Phytophthora sojae]
Length = 167
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 179 SPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
+P+EL FQ GT+N + C + K YA +EF+ + V AL LN T +G+ L+
Sbjct: 90 TPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLLNDTMFRGRQLK 149
Query: 237 MFHSTQSIQ 245
+ Q+++
Sbjct: 150 VTPKRQNVR 158
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 38.9 bits (89), Expect = 4.2, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 9 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 68
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
LNG G+ L++ ++ K E KS
Sbjct: 69 NLNGREFSGRALRVDNAASEKNKEELKS 96
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKY-ALVEFSDQACVIPAL-KLN 226
++ N+ +S Q+L D +KVG V ++ + TNK +VEF+ + + AL KL+
Sbjct: 126 IIVENLSSRISWQDLKDLMRKVGEVTFV----DAHRTNKNEGVVEFASHSDMKNALDKLD 181
Query: 227 GTNLKGKTLQM 237
GT+L G+ L++
Sbjct: 182 GTDLNGRKLKL 192
>gi|147827572|emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
Length = 175
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + +A VEF + V AL L
Sbjct: 48 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLL 107
Query: 226 NGTNLKGKTLQM 237
N + L G+ L++
Sbjct: 108 NESELHGRQLKV 119
>gi|294878913|ref|XP_002768513.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871063|gb|EER01231.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 196
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 166 RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALVEFSDQACVIPAL 223
+R++ +++ +P+EL + F+ G + I + + +A +EF D+A V AL
Sbjct: 98 KRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNAL 157
Query: 224 KLNGTNLKGKTLQMF 238
LN T +G+ L++
Sbjct: 158 LLNDTMFRGRQLKVL 172
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNKYALVEFSDQACVIPALKL 225
R++ N++ +P+E+ F GT+N + + YA VEF++ + V AL L
Sbjct: 115 RSIYVGNVDYHATPEEIQQHFASCGTINRVTILFDKYTGPKGYAYVEFAEPSLVQNALHL 174
Query: 226 NGTNLKGKTLQM 237
N + L+G+ +++
Sbjct: 175 NESVLRGRQIKV 186
>gi|221483800|gb|EEE22112.1| RNA-binding protein, putative [Toxoplasma gondii GT1]
Length = 268
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 166 RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPAL 223
RR++ N++ S +P EL + F+ GT+N I + YA +EF+ +A V A+
Sbjct: 138 RRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNSEAAVQNAI 197
Query: 224 KLNGTNLKGKTLQMFHSTQSI 244
L+ T K + +++ ++I
Sbjct: 198 LLSDTVFKQRQIKVVAKRKNI 218
>gi|390363636|ref|XP_781943.2| PREDICTED: uncharacterized protein LOC576551 [Strongylocentrotus
purpuratus]
Length = 394
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 161 KIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVEFSDQA 217
K +++R+L N+ ++ + + + F++ GTV +R R+ T + V F D +
Sbjct: 248 KKHDMKRSLFVGNLAFNIDDEAVRNHFEEFGTVEGVRLI-RDKATGVGKGFGYVLFEDSS 306
Query: 218 CVIPALKLNGTNLKGKTLQM 237
V ALK++GT L G+ L++
Sbjct: 307 SVQFALKMDGTKLNGRPLRV 326
>gi|302814589|ref|XP_002988978.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
gi|300143315|gb|EFJ10007.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
Length = 178
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ S +P+E+ FQ GTVN + T + +A VEF + V AL L
Sbjct: 47 RSVYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQNALIL 106
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 107 NESELHGRPIKV 118
>gi|71030596|ref|XP_764940.1| spliceosome associated protein [Theileria parva strain Muguga]
gi|68351896|gb|EAN32657.1| spliceosome associated protein, putative [Theileria parva]
Length = 290
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+I E+ L N+++ V + L D F G V + E YA+V F D
Sbjct: 98 KEIREVGAKLFVGNLDDEVDERLLHDTFSAFGRVLSAKMVRSETSGKTYAIVSFDDFEAS 157
Query: 220 IPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAA 276
AL+ +NG L K + + ++ + K E + AA+R I A R K+ ++AA
Sbjct: 158 DAALRTMNGQFLCNKPIHVSYAYKEDTKGE-RHGGAAERLI--ASKRPKDYSKHMAAA 212
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVEFS 214
+++ +E +L ++E SVS L D F +G+V+ IR C R+ T YA V F+
Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVC-RDAITKTSLGYAYVNFN 87
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHS 240
D A+ +LN T +KG+ ++ S
Sbjct: 88 DHEAGRKAIEQLNYTPIKGRLCRIMWS 114
>gi|449519186|ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 229
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + +A VEF + V AL L
Sbjct: 103 RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLL 162
Query: 226 NGTNLKGKTLQM 237
N + L G+ L++
Sbjct: 163 NESELHGRQLKV 174
>gi|237843899|ref|XP_002371247.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211968911|gb|EEB04107.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221504196|gb|EEE29871.1| hypothetical protein TGVEG_008880 [Toxoplasma gondii VEG]
Length = 268
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 166 RRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPAL 223
RR++ N++ S +P EL + F+ GT+N I + YA +EF+ +A V A+
Sbjct: 138 RRSVYVGNVDYSSTPAELQEHFKSCGTINRITIMVDKYTGHPKGYAYIEFNSEAAVQNAI 197
Query: 224 KLNGTNLKGKTLQMFHSTQSI 244
L+ T K + +++ ++I
Sbjct: 198 LLSDTVFKQRQIKVVAKRKNI 218
>gi|308473552|ref|XP_003099000.1| hypothetical protein CRE_26714 [Caenorhabditis remanei]
gi|308267803|gb|EFP11756.1| hypothetical protein CRE_26714 [Caenorhabditis remanei]
Length = 294
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 151 PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYAL 210
PP + E +RTL+ + I P++L +FF VG V +R T ++ T +
Sbjct: 126 PPKNAKLELSPEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIIT-DSRTGRSKG 184
Query: 211 VEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRV 266
+ + V L LNG L G LQ IQ+ A+ N AA + + V
Sbjct: 185 ICYES---VPLGLALNGQRLMGAPLQ-------IQRTCAERNRAANSSMASTLGFV 230
>gi|145480015|ref|XP_001426030.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393102|emb|CAK58632.1| unnamed protein product [Paramecium tetraurelia]
Length = 308
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA-LKL 225
R + N+ + QELV+ F + G + I F YAL+E+ Q C A L +
Sbjct: 88 RKIYVGNLNHKFTSQELVEIFNRFGKILDIIF------KETYALIEYPTQQCATEAILYM 141
Query: 226 NGTNLKGKTLQM 237
N N KG+TL++
Sbjct: 142 NEKNCKGETLKV 153
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFC-TRENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMR 75
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA 255
LN +L G+ L++ ++ K E K+ +A+
Sbjct: 76 NLNAFDLNGRPLRVDNAASEKSKEELKNLQAS 107
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT+ + + + P++L DFF VG V +R + N + A VEF D V A+
Sbjct: 167 RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYVEFVDSTSVPLAIG 226
Query: 225 LNGTNLKG 232
L G + G
Sbjct: 227 LTGQRVLG 234
>gi|58264106|ref|XP_569209.1| hypothetical protein CNB03760 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108024|ref|XP_777394.1| hypothetical protein CNBB1950 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260084|gb|EAL22747.1| hypothetical protein CNBB1950 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223859|gb|AAW41902.1| hypothetical protein CNB03760 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1121
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTR--ENDTNKYALVEFSDQ 216
TK+ + TL + + ++ F + GT+++I+ + +A VE S +
Sbjct: 830 TKRSDAANSTLFVGGLNSKSTEVDIKGLFNEFGTISHIKLGWDPLKRICKGFAFVEMSTE 889
Query: 217 ACVIPALKLNGTNLKGKTLQM-----FHSTQSIQKPEAKSNEAAQREI 259
A ALKL+GT KGK L++ H+ + Q E K ++AA++ +
Sbjct: 890 AEAKAALKLHGTQYKGKYLKVEISDPNHANKKSQ--ERKPDQAAEKRL 935
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 148 PQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTR--ENDT 205
P+ P P+T D E RRT+ + + +EL +FF+KVG V + N +
Sbjct: 164 PRDSPPPLTED----ERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRS 219
Query: 206 NKYALVEFSDQACVIPALKLNGTNLKG----KTLQMFHSTQSIQKPEAKSN 252
VEF ++ V AL+L G L G L + ++ P+A N
Sbjct: 220 KGVGYVEFKNEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDATGN 270
>gi|84995240|ref|XP_952342.1| splicing factor 3b subunit 4 [Theileria annulata strain Ankara]
gi|65302503|emb|CAI74610.1| splicing factor 3b subunit 4, putative [Theileria annulata]
Length = 290
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
K+I E+ L N+++ V + L D F G V + E YA+V F D
Sbjct: 98 KEIREVGAKLFVGNLDDEVDERLLHDTFSAFGRVLSAKLVRSETSGKTYAIVSFDDFEAS 157
Query: 220 IPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAA 276
AL+ +NG L K + + ++ + K E + AA+R I A R K+ ++AA
Sbjct: 158 DAALRTMNGQFLCNKPIHVSYAYKEDTKGE-RHGGAAERLI--ASKRPKDYSKHMAAA 212
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 153 LPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK-YAL 210
+P+ + K R++ N++ S +P+E+ FQ GT+N + C + K YA
Sbjct: 39 VPMETEEDKAAADARSIYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAY 98
Query: 211 VEFSDQACVIPALKLNGTNLKGKTLQM 237
VEF++ + AL ++ + +G+ +++
Sbjct: 99 VEFAEPEFIDAALAMDNSLFRGRLIKV 125
>gi|156059388|ref|XP_001595617.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980]
gi|154701493|gb|EDO01232.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 182
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ S SP+++ FQ G++N + + YA VEF + + V AL
Sbjct: 66 RSIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQALV 125
Query: 225 LNGTNLKGKTLQ 236
LN + KG+ L+
Sbjct: 126 LNESVFKGRNLK 137
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT+ + + + P++L DFF VG V +R + N + A VEF + V A+
Sbjct: 150 RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG 209
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSN 252
L G L G + + S +P A +N
Sbjct: 210 LTGQRLLGVPIIVQASQAEKNRPAAMAN 237
>gi|405118614|gb|AFR93388.1| hypothetical protein CNAG_03888 [Cryptococcus neoformans var.
grubii H99]
Length = 1120
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTR--ENDTNKYALVEFSDQ 216
TK+ + TL + + ++ F + GT+++I+ + +A VE S +
Sbjct: 829 TKRSDAANSTLFVGGLNNKSTEVDIKGLFNEFGTISHIKLGWDPLKRICKGFAFVEMSTE 888
Query: 217 ACVIPALKLNGTNLKGKTLQM-----FHSTQSIQKPEAKSNEAAQREI 259
A ALKL+GT KGK L++ H+ + Q E K ++AA++ +
Sbjct: 889 AEAKAALKLHGTQYKGKYLKVEISDPNHANKKSQ--ERKPDQAAEKRL 934
>gi|339255520|ref|XP_003370865.1| cleavage stimulation factor protein [Trichinella spiralis]
gi|316963145|gb|EFV48928.1| cleavage stimulation factor protein [Trichinella spiralis]
Length = 256
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFD-EKC 68
+ + V NI+ AT ++++ +F +G V RL R+ P C ++ D E
Sbjct: 21 ENRCFAVGNISYDATEEELKEIFSQVGPVVGFRLV-FDRETGKPKGYGFC--EYLDQETA 77
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEI--AAQQQ----GPNSGEPKLPAHV 122
+ ++L N F R L V +E + L+I AA ++ GP K P +
Sbjct: 78 LSAQRNLCNYEFHGRPLRVDAAVGDRSREEMQQLQITLAAPEEENPYGPEVDSEKCPEMI 137
Query: 123 TNQIEGVPPNQVISTHDPVLVQ--HGLPQYPPLPITYDTKKIEEIRRTLVAINIEES-VS 179
+Q+ +PP Q+ D L++ +G + I KK +++ + LV + + + +
Sbjct: 138 VHQVASLPPEQM----DEFLIELKYGC-EINKRRIVRLLKKNQQLAQALVYVMLRMNLIE 192
Query: 180 PQELVDFF 187
P E FF
Sbjct: 193 PSEAATFF 200
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNKYALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + + +A VEF + V AL+L
Sbjct: 89 RSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQL 148
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 149 NESELHGRQLK 159
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 152 PLPITYDTKKIEEI-RRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNKYA 209
P + + + EE+ R++ N++ + +P+E+ FQ GTVN + + +A
Sbjct: 73 PASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFA 132
Query: 210 LVEFSDQACVIPALKLNGTNLKGKTLQ 236
VEF + V AL+LN + L G+ L+
Sbjct: 133 YVEFVEVEAVQEALQLNESELHGRQLK 159
>gi|449458309|ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 237
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + +A VEF + V AL L
Sbjct: 111 RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLL 170
Query: 226 NGTNLKGKTLQM 237
N + L G+ L++
Sbjct: 171 NESELHGRQLKV 182
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 21/150 (14%)
Query: 109 QGPNSGEPKLPAHVTNQIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRT 168
Q PN E L + + G P + S DP L + G+
Sbjct: 68 QQPNDAERALDTLNFDPVNGKPCRIMWSQRDPSLRRSGVG-------------------N 108
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPAL-KLN 226
+ N+E+ + + + D F G + + EN +K YA V F Q A+ K+N
Sbjct: 109 IFIKNLEKDIDNKAIYDTFSAFGNILSCKIALDENGNSKGYAFVHFETQEAANRAIEKVN 168
Query: 227 GTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
G L GK + + H ++ E N AA+
Sbjct: 169 GMLLSGKKVFVGHFMSRKERMEKIGNLAAK 198
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 146 GLPQY-PPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND 204
G QY PPL + L+ N+ VS Q+L DF +K G V ++ N+
Sbjct: 95 GSSQYGPPLRTEH----------RLIVENLSSRVSWQDLKDFMRKAGEVTFV--DAHRNN 142
Query: 205 TNKYALVEFSDQACVIPAL-KLNGTNLKGKTLQM 237
N+ +VEF+ + + A+ KL+G+ L G+ +++
Sbjct: 143 PNE-GVVEFASSSDMKSAMDKLDGSELNGRRIKL 175
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFSDQACVIPALKLNGTN 229
N+ ES Q++ + F+ G + +R ++ DT K +A V+F D + V AL+ +G+
Sbjct: 142 NLPESAEEQDIRELFETCGEIEEVRM-PKDKDTEKKKGFAFVQFRDSSSVKAALEKDGSE 200
Query: 230 LKG 232
KG
Sbjct: 201 FKG 203
>gi|345487396|ref|XP_001600207.2| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
factor 4B [Nasonia vitripennis]
Length = 535
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKG 232
N+ V ++L++FFQ + V+ +R N Y V+F D+ +I AL + TNLK
Sbjct: 88 NLPYDVEEEDLIEFFQDM-KVSSMRLPKEGNKFRGYGYVQFEDRQSLIDALSMIDTNLKS 146
Query: 233 KTLQM 237
+ +++
Sbjct: 147 RRMRI 151
>gi|226509296|ref|NP_001152340.1| polyadenylate-binding protein 2 [Zea mays]
gi|195655291|gb|ACG47113.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 117 KLPAHVTNQIEGVPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEE 176
++ A V +++GV PN S + K E R++ N++
Sbjct: 53 EMQAKVAKEMQGVDPNATTSEN----------------------KEEMDSRSVFIGNVDY 90
Query: 177 SVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTL 235
+ +P + F GTVN + T + K +A VEF + V A+KLN + L G+ L
Sbjct: 91 ACTPXXVXQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHGRQL 150
Query: 236 Q 236
+
Sbjct: 151 K 151
>gi|221054940|ref|XP_002258609.1| mrna processing protein [Plasmodium knowlesi strain H]
gi|193808678|emb|CAQ39381.1| mrna processing protein, putative [Plasmodium knowlesi strain H]
Length = 820
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 168 TLVAINIEESVSPQELVDFFQKVGTVNYIR--FCTRENDTNKYALVEFSD-QACVIPALK 224
+L NI V+ +EL D +VG V +R + +N + +A E+ D + C++
Sbjct: 8 SLWIGNIPFDVTERELDDVLSRVGEVVSVRIKYDIEKNISKGFAFCEYKDLETCMLALKY 67
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKS 251
+NG LKG+ L+++ + + ++ A
Sbjct: 68 INGYELKGRKLRLYWANEEFREKMASG 94
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVEFS 214
+++ +E +L ++E SVS L D F +G+V+ IR C R+ T YA V F+
Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVC-RDAITKTSLGYAYVNFN 87
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHS 240
D A+ +LN T +KG+ ++ S
Sbjct: 88 DHEAGRKAIEQLNYTPIKGRLCRIMWS 114
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 156 TYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVE 212
T + + E + +L +++ SVS L D F +G V+ IR C R+ T YA V
Sbjct: 24 TNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVC-RDAITKTSLGYAYVN 82
Query: 213 FSDQACVIPAL-KLNGTNLKGKTLQMFHS 240
F+D A+ KLN T +KGK ++ S
Sbjct: 83 FNDHDAAKTAIEKLNFTPIKGKLCRIMWS 111
>gi|340058242|emb|CCC52596.1| DRBD14 [Trypanosoma vivax Y486]
Length = 467
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLN 226
RTL ++ ++ Q DF + G V +R C + +A VE + + AL+L+
Sbjct: 349 RTLYVSHLPPTLPQQTFFDFLKACGEVTKVRVCRGKMYATLFAFVEMASVEGALAALRLD 408
Query: 227 GTNLKGKTLQMFHSTQSIQKPEA 249
NL G +++ + IQ +A
Sbjct: 409 RMNLHGCNIRVQMARNPIQDSQA 431
>gi|339251302|ref|XP_003373134.1| cleavage stimulation factor subunit, tau variant [Trichinella
spiralis]
gi|316969004|gb|EFV53174.1| cleavage stimulation factor subunit, tau variant [Trichinella
spiralis]
Length = 351
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFD-EKC 68
+ + V NI+ AT ++++ +F +G V RL R+ P C ++ D E
Sbjct: 21 ENRCFAVGNISYDATEEELKEIFSQVGPVVGFRLV-FDRETGKPKGYGFC--EYLDQETA 77
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEI--AAQQQ----GPNSGEPKLPAHV 122
+ ++L N F R L V +E + L+I AA ++ GP K P +
Sbjct: 78 LSAQRNLCNYEFHGRPLRVDAAVGDRSREEMQQLQITLAAPEEENPYGPEVDSEKCPEMI 137
Query: 123 TNQIEGVPPNQVISTHDPVLVQ--HGLPQYPPLPITYDTKKIEEIRRTLVAINIEES-VS 179
+Q+ +PP Q+ D L++ +G + I KK +++ + LV + + + +
Sbjct: 138 VHQVASLPPEQM----DEFLIELKYGC-EINKRRIVRLLKKNQQLAQALVYVMLRMNLIE 192
Query: 180 PQELVDFF 187
P E FF
Sbjct: 193 PSEAATFF 200
>gi|326680792|ref|XP_003201624.1| PREDICTED: hypothetical protein LOC100538123 [Danio rerio]
Length = 325
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 138 HDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR 197
H V +H P P+ ++ IE R+TL+ N+ V+ Q+L++ F +G+++ ++
Sbjct: 112 HIYVTFEHSGRDQQPDPVVPTSRFIE--RKTLLVSNLHPMVTEQQLIEKFGALGSISTVQ 169
Query: 198 FCTRENDTNKYALVEFSDQACVIPALK-LNGTNLKGKTL 235
C + YA V F + + A K LN T+L K L
Sbjct: 170 VCRNNIISPAYAFVTFHHRRDAMRAQKALNFTDLLNKPL 208
>gi|407404347|gb|EKF29837.1| hypothetical protein MOQ_006363 [Trypanosoma cruzi marinkellei]
Length = 469
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E RTL ++ + Q L++ G VN +R C T +A VE S
Sbjct: 346 ESKSRTLYISHLPPLLPQQTLMELLSMCGVVNKVRVCRGSGYTTLFAFVEMSTAREARAT 405
Query: 223 LKLNGTNLKGKTLQMFHSTQSIQKPEAK 250
L+LN NL G ++++ + SIQ +++
Sbjct: 406 LRLNRMNLLGCSIRVQIARNSIQDTQSE 433
>gi|50553814|ref|XP_504318.1| YALI0E23628p [Yarrowia lipolytica]
gi|49650187|emb|CAG79917.1| YALI0E23628p [Yarrowia lipolytica CLIB122]
Length = 621
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Query: 152 PLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYAL 210
P+ ++ + +RT+ + V EL DFF + G V+ + R + A
Sbjct: 315 PISKNHELSAEDRDKRTVYVQQVAPHVQSTELFDFFAEAGPVHDVSLVKDRSSRCRGVAF 374
Query: 211 VEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQ 270
VEF D V A+ L G +L G+ L + T S + E + +EA+ +
Sbjct: 375 VEFEDVESVSRAIGLTGRSLHGQAL-LIRCTDSARNREEQQSEASFNSSGAGSTHAVANV 433
Query: 271 NMISAAIDPV 280
N ++AID V
Sbjct: 434 NASTSAIDSV 443
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEFS+ V AL
Sbjct: 69 RSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALV 128
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 129 LNESVFRGRNIKV 141
>gi|71659731|ref|XP_821586.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70886969|gb|EAN99735.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 469
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPA 222
E RTL ++ + Q L++ G VN +R C T +A VE S
Sbjct: 346 ESKSRTLYISHLPPLLPQQTLMELLSMCGVVNKVRVCRGSGYTTLFAFVEMSTAREARAT 405
Query: 223 LKLNGTNLKGKTLQMFHSTQSIQKPEAK 250
L+LN NL G ++++ + SIQ +++
Sbjct: 406 LRLNRMNLLGCSIRVQIARNSIQDTQSE 433
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KLNG 227
L+ N+ +S Q+L D +K G V F T +VEF+ ++ + A+ KL+G
Sbjct: 129 LIVENLSSRISWQDLKDLMRKAGEVT---FVDAHRPTKNEGVVEFASRSDLKNAISKLDG 185
Query: 228 TNLKGKTLQMF 238
T L G+ L++F
Sbjct: 186 TELNGRKLKIF 196
>gi|402086724|gb|EJT81622.1| pre-mRNA branch site protein p14 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 115
Score = 38.5 bits (88), Expect = 6.0, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R L N+ +V+P+EL D F K G + +R N T A V + D A
Sbjct: 10 EVNRALFVKNLSYNVTPEELFDLFGKFGPIRQVRQGIASN-TKGTAFVVYEDVMDAKTAC 68
Query: 224 -KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQRE 258
KLNG N + + L ++H + + + +K + A++E
Sbjct: 69 DKLNGYNFQNRYLVVLYHQPEKMGR--SKEDLDARKE 103
>gi|387907184|ref|YP_006337520.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582077|gb|AFJ90855.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 90
Score = 38.5 bits (88), Expect = 6.0, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK----YALVEFSDQACVIPAL-KLNG 227
N+ ++ QEL +F+ VG V +++ E+ ++K + +E S++ A+ KLNG
Sbjct: 10 NLSYDMTEQELKKYFESVGEVTHVKIIFDESTSSKRSKGFGFIEMSNEENAKQAIEKLNG 69
Query: 228 TNLKGKTLQMFHSTQSIQKPEAKSN 252
T L G+ + + S +P AK +
Sbjct: 70 TELMGRNIIV-----SAARPRAKKD 89
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVEFS 214
+++ +E +L ++E SVS L D F +G+V+ IR C R+ T YA V F+
Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVC-RDAITKTSLGYAYVNFN 87
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHS 240
D A+ +LN T +KG+ ++ S
Sbjct: 88 DHEAGRKAIEQLNYTPIKGRLCRIMWS 114
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319289|gb|EFH49711.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 202
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNKYALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + + +A VEF + V AL+L
Sbjct: 89 RSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQL 148
Query: 226 NGTNLKGKTLQM 237
N + L G+ L++
Sbjct: 149 NESELHGRQLKV 160
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 168 TLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFSDQACVIPALK 224
+L ++ ESV +L D F +VG V +R C R+ ++ K YA V +++Q AL+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVC-RDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 225 -LNGTNLKGKTLQMFHSTQ 242
LN T + GK +++ +S +
Sbjct: 95 LLNFTPINGKPIRIMYSNR 113
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYI-RFCTRENDTNKYALVEFSDQACVIPAL-KLN 226
++ N+ +S Q+L D +KVG V ++ T++N+ +VEF+ + + A+ KL+
Sbjct: 115 IIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTKKNE----GVVEFASHSDMKNAIEKLD 170
Query: 227 GTNLKGKTLQMF 238
GT+L G+ L+++
Sbjct: 171 GTDLNGRKLKLY 182
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVEFS 214
+++ +E +L ++E SVS L D F +G+V+ IR C R+ T YA V F+
Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVC-RDAITKTSLGYAYVNFN 87
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHS 240
D A+ +LN T +KG+ ++ S
Sbjct: 88 DHEAGRKAIEQLNYTPIKGRLCRIMWS 114
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVEFS 214
+++ +E +L ++E SVS L D F +G+V+ IR C R+ T YA V F+
Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVC-RDAITKTSLGYAYVNFN 87
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHS 240
D A+ +LN T +KG+ ++ S
Sbjct: 88 DHEAGRKAIEQLNYTPIKGRLCRIMWS 114
>gi|307105908|gb|EFN54155.1| hypothetical protein CHLNCDRAFT_13101, partial [Chlorella
variabilis]
Length = 187
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 152 PLPITYDTKKIEE---IRRTLVAINIEESVSPQELVDFFQKV-GTVNYIRFCTRENDTNK 207
P+ TY + EE + RT+ NI+ V ++L +FFQ + G V+ IR + K
Sbjct: 90 PVNNTYLPRSTEERELVARTVFVGNIDRVVEREQLSEFFQNLCGPVSKIRLLGDSQHSAK 149
Query: 208 YALVEFSDQACVIPALKLNGTNL 230
A +EF ALKL+G L
Sbjct: 150 IAFIEFVTAESARAALKLSGALL 172
>gi|393216080|gb|EJD01571.1| pre-mRNA branch site protein p14 [Fomitiporia mediterranea MF3/22]
Length = 123
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALK-L 225
R L N+ +++ +L + F + G++ IR E++T A V + D AL+ L
Sbjct: 16 RILFVKNLNYNITGDDLYELFGRYGSIRQIRLGV-ESNTKGTAFVVYDDVTDAKNALEHL 74
Query: 226 NGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVK 267
NG +L+ + + + + S Q A E A+RE E A + K
Sbjct: 75 NGFHLQERYIVVLYHMPSRQDAAAVKAEIARREEELAQLKAK 116
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 158 DTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALVEFS 214
+++ +E +L ++E SVS L D F +G+V+ IR C R+ T YA V F+
Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVC-RDAITKTSLGYAYVNFN 87
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHS 240
D A+ +LN T +KG+ ++ S
Sbjct: 88 DHEAGRKAIEQLNYTPIKGRLCRIMWS 114
>gi|303280321|ref|XP_003059453.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459289|gb|EEH56585.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 178
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ ++ + +P+EL FQ GTVN + T + + K +A VEF + V AL L
Sbjct: 38 RSIHVGGVDYACTPEELQMHFQSCGTVNRVTILTDKYENPKGFAYVEFLEADAVANALLL 97
Query: 226 NGTNLKGKTLQM 237
N T + G+ +++
Sbjct: 98 NDTEVHGRKIKV 109
>gi|170061907|ref|XP_001866439.1| hypothetical protein CpipJ_CPIJ015882 [Culex quinquefasciatus]
gi|167880010|gb|EDS43393.1| hypothetical protein CpipJ_CPIJ015882 [Culex quinquefasciatus]
Length = 269
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 183 LVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTL 235
L ++F K G ++ IR R+ YA + F++ A V AL ++G + GK +
Sbjct: 147 LTEYFAKAGEIHSIRNLARKG----YAFIRFNEAASVEKALAMDGQDWNGKNI 195
>gi|326519560|dbj|BAK00153.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 284
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 9 VKTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKC 68
++ + V+V NI+ A++ ++ F + G +E + + S S++ YV F D +
Sbjct: 1 MEVRTVKVGNISLSASKREITEFFSFSGDIEYVEMQ------SETDWSQLAYVTFKDSQG 54
Query: 69 VGISQHLTNTVFIDRALVVTPYNSGEIPDEQR 100
+ L+ +D +++TP + ++P E R
Sbjct: 55 ADTAVLLSGATIVDLHVIITPVENYQLPPEAR 86
>gi|193213871|ref|YP_001995070.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193087348|gb|ACF12623.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 88
Score = 38.5 bits (88), Expect = 6.7, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 165 IRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFSDQACVIP 221
+R+T+ N+ S E+ + F++ GTV+ ++F + +T K + VE D+ IP
Sbjct: 1 MRKTIYVANLPFGTSEDEVRELFEQHGTVHSVKFIM-DRETGKFRGFGFVEM-DEDEAIP 58
Query: 222 ALK-LNGTNLKGKTLQMFHSTQSIQKPEAK 250
A+ LNG + G+ LQ+ + + +KP++K
Sbjct: 59 AIDALNGLSFGGRNLQVNEARE--RKPKSK 86
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 179 SPQELVDFFQKVGTVNYIR-FCTRENDTNK-YALVEFSDQACVIPALKLNGTNLKGKTLQ 236
+P+EL FQ GT+N + C + K YA +EF+ + V AL LN T +G+ L+
Sbjct: 123 TPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASKDAVESALLLNDTMFRGRQLK 182
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 168 TLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK---YALVEFSDQACVIPALK 224
+L ++ ESV +L D F +VG V +R C R+ ++ K YA V +++Q AL+
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVC-RDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 225 -LNGTNLKGKTLQMFHSTQ 242
LN T + GK +++ +S +
Sbjct: 95 LLNFTPINGKPIRIMYSNR 113
>gi|402587616|gb|EJW81551.1| RNA recognition domain-containing protein [Wuchereria bancrofti]
Length = 150
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 162 IEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKY-------ALVEFS 214
IE + ++ N+ S +EL D F GT+ I FC DT Y A +EF+
Sbjct: 47 IEACKHSVYVNNLNIRTSRKELEDHFGSCGTIITIEFC---KDTVTYRFIGMNSARIEFT 103
Query: 215 DQACVIPALKLNGTNLKGKTL 235
D A + A+ L T LKG +
Sbjct: 104 DIAAKLKAMDLADTFLKGSKI 124
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 169 LVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL-KLNG 227
L+ N+ +S Q+L D +K G V F T +VEF+ ++ + A+ KL+G
Sbjct: 112 LIVENLSSRISWQDLKDLMRKAGEVT---FVDAHRPTKNEGVVEFASRSDLKNAISKLDG 168
Query: 228 TNLKGKTLQMF 238
T L G+ L++F
Sbjct: 169 TELNGRKLKIF 179
>gi|21536704|gb|AAM61036.1| contains similarity to poly(A)-binding protein II [Arabidopsis
thaliana]
Length = 227
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V +L L
Sbjct: 103 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLIL 162
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 163 NESELHGRQIKV 174
>gi|321470441|gb|EFX81417.1| hypothetical protein DAPPUDRAFT_224305 [Daphnia pulex]
Length = 203
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 173 NIEESVSPQELVDFFQKVGTVNYIRFCTRE-----NDTNKYALVEFSDQACVIPALK-LN 226
N++ V+ ELV FQ GT++ + + + YA + FS + I A K +
Sbjct: 30 NLDSRVTEFELVKLFQNAGTIDKLEYLFHKIGPQAGQPRGYAFLTFSKREEAIRARKEFD 89
Query: 227 GTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMIS 274
G +L G+TL + +S+QK + + Q I A+S K+ +N ++
Sbjct: 90 GKSLLGRTL-LVKPARSVQKDDLTGPKTTQFSI-PALSGAKDNKNKLN 135
>gi|115467128|ref|NP_001057163.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|51535367|dbj|BAD37238.1| putative poly(A) binding protein II [Oryza sativa Japonica Group]
gi|113595203|dbj|BAF19077.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|215704439|dbj|BAG93873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765746|dbj|BAG87443.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635211|gb|EEE65343.1| hypothetical protein OsJ_20615 [Oryza sativa Japonica Group]
Length = 204
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ F GTVN + T + K +A VEF + V A+KL
Sbjct: 82 RSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAVKL 141
Query: 226 NGTNLKGKTLQ 236
N + L G+ ++
Sbjct: 142 NESELHGRQIK 152
>gi|18423239|ref|NP_568751.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|15809838|gb|AAL06847.1| AT5g51120/MWD22_6 [Arabidopsis thaliana]
gi|15982733|gb|AAL09819.1| unknown protein [Arabidopsis thaliana]
gi|19310785|gb|AAL85123.1| unknown protein [Arabidopsis thaliana]
gi|21358850|gb|AAM47151.1| unknown protein [Arabidopsis thaliana]
gi|332008655|gb|AED96038.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 227
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V +L L
Sbjct: 103 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLIL 162
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 163 NESELHGRQIKV 174
>gi|406859894|gb|EKD12956.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1039
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTR-ENDTNKYALVEFSDQACVIPALKL 225
R + +I+ S++P EL F K G V + T+ ++ A V F+ + AL L
Sbjct: 744 REIHVTSIDPSITPDELEKLFSKYGKVERVNLLTKVSGESKGAAFVSFATKEGAAAALDL 803
Query: 226 NGTNLKGKTLQMFHSTQSIQKPEAKS 251
+ T LK + L + + + KP A +
Sbjct: 804 DKTKLKSRVLNVEMAGATNFKPTATT 829
>gi|145531030|ref|XP_001451287.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418931|emb|CAK83890.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 168 TLVAINIEESVSPQELVDFFQKVGTVNYIR--FCTRENDTNKYALVEFSDQACVIPALKL 225
T+ N+ ++ ++ D F+ G V +R + T ++ +A ++F D VI AL++
Sbjct: 94 TIFVKNLSYDLNADQIGDSFRPCGKVANVRMVYNTVTDNFKGFAYIDFEDHQSVIKALQM 153
Query: 226 NGTNLKGKTLQMFHSTQSIQKPEA 249
NG + G+ +Q+ I+KP+A
Sbjct: 154 NGKKVHGRQVQV---DFDIKKPKA 174
>gi|440793741|gb|ELR14916.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 128
Score = 38.1 bits (87), Expect = 7.7, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R + N+ ++P E+ D F K G + IR T +T A V + D A+
Sbjct: 23 EVGRIVFVKNLPFKITPDEMYDIFGKFGAIRQIRLGTNNKETRGTAFVVYEDIFDAKNAV 82
Query: 224 K-LNGTNLKGKTLQMFHSTQS 243
L+G N+ G+ L + + Q+
Sbjct: 83 DHLSGFNIGGRYLIVLYHQQA 103
>gi|321248967|ref|XP_003191302.1| hypothetical protein CGB_A2350C [Cryptococcus gattii WM276]
gi|317457769|gb|ADV19515.1| hypothetical protein CNB03760 [Cryptococcus gattii WM276]
Length = 1139
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTR--ENDTNKYALVEFSDQ 216
TK+ + TL + + ++ F + GT+++I+ + +A VE S +
Sbjct: 849 TKRSDAANSTLFVGGLNNKSTEVDVKSLFNEFGTISHIKLGWDPLKKICKGFAFVEMSTE 908
Query: 217 ACVIPALKLNGTNLKGKTLQM-----FHSTQSIQKPEAKSNEAAQREI 259
A ALKL+GT KGK L++ H+ + Q E K ++AA++ +
Sbjct: 909 AEAKAALKLHGTQYKGKYLKVEISDPNHANKKSQ--EHKPDQAAEKRL 954
>gi|349804535|gb|AEQ17740.1| putative rna-binding region containing protein 2 isoform b isoform
15 [Hymenochirus curtipes]
Length = 258
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 163 EEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVI 220
E RT+ + + + P++L +FF VG V +R + N + A VEF D + V
Sbjct: 7 ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVA 66
Query: 221 PALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA 255
A+ L G + G + +Q +A+ N AA
Sbjct: 67 LAIGLTGQRVLGVPI-------VVQASQAEKNRAA 94
>gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
gi|297309932|gb|EFH40356.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V +L L
Sbjct: 105 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLIL 164
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 165 NESELHGRQIKV 176
>gi|255569508|ref|XP_002525721.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535021|gb|EEF36704.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 249
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 10 KTKVVQVANIAPQATRDQMQTLFGYLGKVEDLRLYPIARDVSIPVQSRICYVKFFDEKCV 69
+T+ VQV +++ A+ ++ F + G++E + I R+ +SR +V F D K +
Sbjct: 4 QTRTVQVKHLSDLASEREIHEFFSFSGEIEHI---DIVRENG---ESRTAFVTFKDPKAL 57
Query: 70 GISQHLTNTVFIDRALVVTPYNSGEIPDEQRALEIAAQQQGPNSG 114
I+ L+ +D+ + +TP + +P E+ A+ PN+G
Sbjct: 58 EIALLLSGATIVDKIVSITPVEN-YVPKR----ELQAKTSPPNNG 97
>gi|452842735|gb|EME44671.1| hypothetical protein DOTSEDRAFT_72205 [Dothistroma septosporum
NZE10]
Length = 238
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ VG++N + + YA VEFS+ V AL
Sbjct: 91 RSIFVGNVDYGASPEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQLVTQALV 150
Query: 225 LNGTNLKGKTLQM 237
LN + + + +++
Sbjct: 151 LNESVFRSRNIKV 163
>gi|52139145|gb|AAH82663.1| LOC494678 protein, partial [Xenopus laevis]
Length = 837
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 26/182 (14%)
Query: 160 KKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACV 219
++ ++ R++ + S ++L D FQK+ V I + D YA+VEF + +
Sbjct: 50 RRNQQQERSVYVSHFPRETSEEQLRDVFQKIAPVRNI---VMDKDRGLYAIVEFESKDGM 106
Query: 220 IPALKLNGTNLKGKTLQMF-HSTQSIQKPEAKSNEAAQREIEEAMSRVKEAQNMISAAID 278
AL+ NL GK L++ + Q+ + + A Q EA+S+ + + +
Sbjct: 107 CAALEEPQINLNGKRLRVKPREKKGFQRKKGSTPRALQPPDPEALSKELLKCSNVEDQMK 166
Query: 279 PVIGILSKDKKKSHS----------------------PVRHLVIVLIVVDVALDLALEIG 316
++ + S +SH P V + LDL LE+G
Sbjct: 167 KMVSLCSPSHHESHLRELLLSLLQETFTEFFPGCQLLPFGSSVNGFEISGCDLDLYLELG 226
Query: 317 DD 318
+D
Sbjct: 227 ED 228
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 160 KKIEEIRR---TLVAINIEESVSPQELVDFF-QKVGTVNYIRFCTRENDTNKY---ALVE 212
++IEE +R T++ IN+ +++ + F + G V ++ C R+ + + A VE
Sbjct: 133 REIEEAQREDLTVLVINLYLGADERKIYEVFSEHAGKVRDVQ-CVRDARSGRSKGVAYVE 191
Query: 213 FSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
F Q VI AL +NG L G+ ++ +Q +A+ N AA+
Sbjct: 192 FYTQESVIKALAMNGFELNGQRIR-------VQSSQAEKNRAAR 228
>gi|389594851|ref|XP_003722648.1| putative RNA binding protein [Leishmania major strain Friedlin]
gi|323363876|emb|CBZ12882.1| putative RNA binding protein [Leishmania major strain Friedlin]
Length = 455
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 173 NIEESVSPQELVDFFQKVG--TVNYIRFCT-RE-NDTNKYALVEFSDQACVIPALKLNGT 228
N+ + + +++ FFQ+ G V +R RE D + VEF + V PA++ G
Sbjct: 276 NVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGFGYVEFMHASSVQPAIETRGD 335
Query: 229 NLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEAMSR 265
L G+ L++ H +S + A + +R E A R
Sbjct: 336 KLNGRELRIVHVNKSKEVKVATKSRREKRRSEHAGGR 372
>gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis thaliana]
Length = 267
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNKYALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + +A VEF + V +L L
Sbjct: 103 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLIL 162
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 163 NESELHGRQIKV 174
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 19/151 (12%)
Query: 95 IPDEQR---ALEIAAQQQGPNSGEPKLPA--HVTNQIEGVPPNQVISTHDPVLVQHGLPQ 149
+PD++ +++ A +Q G P+ P H + EG Q++S P + LP
Sbjct: 79 VPDQELEAIKMKVCAMEQA--EGTPRPPGVQHQAEEEEGTAAGQLLS---PETMGCPLPG 133
Query: 150 YPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR-FCTRENDTNK- 207
P +K+E R++ N++ S +EL F + G V+ + C + + K
Sbjct: 134 TP-------EEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKG 186
Query: 208 YALVEFSDQACVIPALKLNGTNLKGKTLQMF 238
YA +EF+ + V A++L+ + +G+ +++
Sbjct: 187 YAYIEFATKGSVQAAVELDQSLFRGRVIKVL 217
>gi|389593175|ref|XP_003721841.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438343|emb|CBZ12095.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 495
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 129 VPPNQVISTHDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQE-LVDFF 187
+P +T V+ QH PQ+P + +E++R + ++ + PQ L++
Sbjct: 348 MPCASATATPQQVVRQHVFPQHP---------RQDEMKRRTIYVSHLPGLLPQSMLLELL 398
Query: 188 QKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPALKLNGTNLKGKTLQMFHSTQSIQ 245
G VN +R C +A VE A+ +NG L G +++ + ++Q
Sbjct: 399 TTAGPVNKVRICAGAGYCTLFAFVEMRTLEGAQRAMCMNGLQLMGFAIRVQTARNAVQ 456
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKY----ALVEFS 214
TK I L+ N+ V+ Q+L D+ ++ G V Y D N+Y +VEFS
Sbjct: 107 TKGIPNHGYRLIVENLSSRVTWQDLKDYMRQCGEVVYA-------DANRYRRNEGVVEFS 159
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHSTQSIQKP 247
+ + A+ KLNGT + G+ +++ T +I+ P
Sbjct: 160 SRKEMKYAIEKLNGTEINGRHIKL---TPNIKSP 190
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKY----ALVEFS 214
TK I L+ N+ V+ Q+L D+ ++ G V Y D N+Y +VEFS
Sbjct: 99 TKGIPNHGYRLIVENLSSRVTWQDLKDYMRQCGEVVYA-------DANRYRRNEGVVEFS 151
Query: 215 DQACVIPAL-KLNGTNLKGKTLQMFHSTQSIQKP 247
+ + A+ KLNGT + G+ +++ T +I+ P
Sbjct: 152 SRKEMKYAIEKLNGTEINGRHIKL---TPNIKSP 182
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTREND--TNKYALVEFSDQACVIPALK 224
RT+ + + + P++L +FF VG V +R + N + A +EF D V A+
Sbjct: 149 RTVFCMQLAARIRPRDLEEFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVDSTSVPLAIG 208
Query: 225 LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAA 255
L+G L G + +Q +A+ N AA
Sbjct: 209 LSGQRLLGVPI-------IVQASQAEKNRAA 232
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 168 TLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN-------KYALVEFSDQACVI 220
TL NI S + ++L +F K G ++Y+ T+++ N Y V + +A
Sbjct: 678 TLFVKNINFSTTDEQLKSYFDKCGPLHYVSIATKKDPKNPGAKLSMGYGFVRYKRKADAD 737
Query: 221 PALK-LNGTNLKGKTLQMFHSTQSI 244
ALK L T L GKTL++ S +++
Sbjct: 738 RALKVLQMTVLDGKTLELKRSERTL 762
>gi|388491820|gb|AFK33976.1| unknown [Medicago truncatula]
Length = 170
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+++ FQ GTVN + T + K YA VEF + V AL L
Sbjct: 68 RSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAVQEALLL 127
Query: 226 NGTNLKGKTLQMFHSTQS 243
N + L G+ L++ + S
Sbjct: 128 NESELHGRQLKVITTKGS 145
>gi|388500100|gb|AFK38116.1| unknown [Medicago truncatula]
Length = 199
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+++ FQ GTVN + T + K YA VEF + AL L
Sbjct: 68 RSIFVGNVDYACTPEDVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFVEVEAAQEALLL 127
Query: 226 NGTNLKGKTLQ 236
N + L G+ L+
Sbjct: 128 NESELHGRQLK 138
>gi|387169522|gb|AFJ66183.1| hypothetical protein 11M19.19 [Arabidopsis halleri]
Length = 228
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V +L L
Sbjct: 105 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLIL 164
Query: 226 NGTNLKGKTLQM 237
N + L G+ +++
Sbjct: 165 NESELHGRQIKV 176
>gi|292623739|ref|XP_001923602.2| PREDICTED: hypothetical protein LOC562233 [Danio rerio]
Length = 607
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 138 HDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR 197
H V +H P P+ ++ IE +TL+ N+ V+ Q+L++ F +G+++ ++
Sbjct: 377 HIYVTFEHSGRDQQPDPVVPTSRFIE--WKTLLVSNLHPMVTEQQLIEKFGALGSISTVQ 434
Query: 198 FCTRENDTNKYALVEFSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQ 256
C + YA V F + + A K LN T+L K L + + + ++ ++
Sbjct: 435 VCRNNIISPAYAFVTFHHRRDAVRAQKALNFTDLLNKPLIIMWGPDKTIEVLSDNDSSSP 494
Query: 257 REIEEAMSRVKEAQNMISAAIDPVIGILSKDKKKSHSPVR 296
R+ EE + + + S I+ ++++K S R
Sbjct: 495 RQTEERETAGETEERKTSGEIEREAAGDTEERKTSEETER 534
>gi|326680701|ref|XP_003201594.1| PREDICTED: hypothetical protein LOC100149358 [Danio rerio]
Length = 402
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 138 HDPVLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIR 197
H V +H P P+ ++ IE R+TL+ N+ V+ Q+L++ F +G+++ ++
Sbjct: 155 HIYVTFEHSGRDQQPDPVVPTSRFIE--RKTLLVSNLHPMVTEQQLIEKFGALGSISTVQ 212
Query: 198 FCTRENDTNKYALVEFSDQACVIPALK-LNGTNLKGKTL 235
C + YA V F + + A K LN T+L K L
Sbjct: 213 VCRNNIISPAYAFVTFHHRRDAVRAQKALNFTDLLNKPL 251
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT-RENDTNK-YALVEFSDQACVIPALK 224
R++ NI + ++L D F +VG V R RE K Y E+ DQ + A++
Sbjct: 15 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMR 74
Query: 225 -LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIE 260
L+G L G+ L++ ++ K E K +A+ +E
Sbjct: 75 NLSGYELNGRQLRVDNAASEKNKEELKILQASGPPVE 111
>gi|345562894|gb|EGX45902.1| hypothetical protein AOL_s00112g91 [Arthrobotrys oligospora ATCC
24927]
Length = 116
Score = 37.7 bits (86), Expect = 9.4, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 164 EIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQACVIPAL 223
E+ R L N+ VS +EL D F K G + IR N+T A V + + A
Sbjct: 11 EVNRILFVKNLSYQVSSEELFDLFGKFGPIRQIRQGI-ANNTKGTAFVVYEEVGDAKTAC 69
Query: 224 -KLNGTNLKGKTL-QMFHSTQSIQKPEAKSNEAAQREIEE 261
KLNG N + + L ++H + + + E K Q E+E+
Sbjct: 70 DKLNGFNFQNRYLVVLYHQPEKMARSE-KDLALRQEELEK 108
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 155 ITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN---KYALV 211
I ++ +E + +L ++ SVS L D F +G+V+ IR C R+ T YA V
Sbjct: 31 IEAESPNVENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVC-RDAITKTSLGYAYV 89
Query: 212 EFSDQACVIPAL-KLNGTNLKGKTLQMFHS 240
F+D A+ KLN T +KG+ ++ S
Sbjct: 90 NFNDHEAGKTAIEKLNYTAIKGRPCRIMWS 119
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE--NDTNKYALVEFSDQACVIPALK 224
R++ N++ SP+E+ FQ G++N + + YA VEF++ + V AL
Sbjct: 91 RSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQALV 150
Query: 225 LNGTNLKGKTLQM 237
LN + +G+ +++
Sbjct: 151 LNESVFRGRNIKV 163
>gi|313230893|emb|CBY18890.1| unnamed protein product [Oikopleura dioica]
Length = 492
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRE-NDTNKYALVEFSDQACVIPALKL 225
RT++A+ + ++ +L DFF VG V ++ E + T A +EF V A+ L
Sbjct: 130 RTVIAMQLAHAIREFDLKDFFSSVGDVRAVKLIKDERHKTQGLAYIEFKHVQSVPLAMGL 189
Query: 226 NGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREIEEA 262
G + G+ + + H Q+ + ++ E A++ + +A
Sbjct: 190 TGQRVLGRAI-VVHHAQADKNRHSEKLEQAKKNLMKA 225
>gi|83317372|ref|XP_731133.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23491071|gb|EAA22698.1| splicing factor, arginine/serine-rich 12 [Plasmodium yoelii yoelii]
Length = 501
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 159 TKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNKYALVEFSDQAC 218
KK + + + NI E + ++V+FF+ VG +F E VEF ++
Sbjct: 44 NKKFDVFSKIIYMENIPEKYTENDVVEFFKNVGKTTNYKFLYNEQINKHTVYVEFINEEN 103
Query: 219 VIPALKLNGTNLKGK 233
AL LNGT ++ K
Sbjct: 104 AKAALNLNGTKIEDK 118
>gi|292623699|ref|XP_001337852.3| PREDICTED: hypothetical protein LOC797383 [Danio rerio]
Length = 309
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 141 VLVQHGLPQYPPLPITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCT 200
V +H + P P+ IE R+TL+ N+ V+ Q+L++ F +G+++ ++ C
Sbjct: 98 VTFEHSGREQEPHPVLPTYHYIE--RKTLLVSNLHPMVTEQQLIEKFGPLGSISTVQVCR 155
Query: 201 RENDTNKYALVEFSDQACVIPALK-LNGTNLKGKTLQMFHSTQSIQKPEAKSNEAAQREI 259
+ YA V F + + A K LN T+L K L + + + + ++QR+
Sbjct: 156 NNIVSPVYAFVTFHHRRDAVRAQKALNFTHLLNKPLIIMWGPDKTTEVLSDYDSSSQRQT 215
Query: 260 EE 261
EE
Sbjct: 216 EE 217
>gi|170036993|ref|XP_001846345.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
gi|167879973|gb|EDS43356.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
Length = 218
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 154 PITYDTKKIEEIRRTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTN--KYALV 211
PI +K E R++ N++ + +EL F GT+N + + D + +A +
Sbjct: 80 PIMSAEEKAEIDNRSIYVGNVDYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYI 139
Query: 212 EFSDQACVIPALKLNGTNLKGKTLQ 236
EF + V AL +N T +G+ ++
Sbjct: 140 EFGSKEFVETALAMNETLFRGRQIK 164
>gi|334188309|ref|NP_001190511.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008656|gb|AED96039.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 167 RTLVAINIEESVSPQELVDFFQKVGTVNYIRFCTRENDTNK-YALVEFSDQACVIPALKL 225
R++ N++ + +P+E+ FQ GTVN + T + K +A VEF + V +L L
Sbjct: 141 RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLIL 200
Query: 226 NGTNLKGKTLQ 236
N + L G+ ++
Sbjct: 201 NESELHGRQIK 211
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,059,830,505
Number of Sequences: 23463169
Number of extensions: 249843396
Number of successful extensions: 670644
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 795
Number of HSP's that attempted gapping in prelim test: 669237
Number of HSP's gapped (non-prelim): 1637
length of query: 405
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 260
effective length of database: 8,957,035,862
effective search space: 2328829324120
effective search space used: 2328829324120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)