BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14560
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 143/179 (79%), Gaps = 12/179 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQ PLG G+A A +Y+ VC LYGDGA+NQGQ FEA N+AKLW +P
Sbjct: 152 KNFYGGNGIVGAQQPLGAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLP 211
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
++VCENNG+GMGT+AERSSAST+YYTRGDY+PGIWVDGMD+LAVREA+K+A Y SGK
Sbjct: 212 VLFVCENNGFGMGTTAERSSASTEYYTRGDYVPGIWVDGMDILAVREATKWAKEYCDSGK 271
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELK 179
GPL++E+ TYRY GHSMSDPGTS+ RDPIT FK++++ S LAT +ELK
Sbjct: 272 GPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELK 330
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Query: 263 AQTLKSL----LKSISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQT 318
A+ L+SL +++ R ++E +F TKP KLHKL GP+ VT+ ++DAL YYR MQ
Sbjct: 5 ARQLQSLTASGIRTQQVRLASTEVSFHTKPCKLHKLDNGPNTSVTLNREDALKYYRDMQV 64
Query: 319 IRRLETSAGNLYKEKVIRGFCHLYSGQ 345
IRR+E++AGNLYKEK IRGFCHLYSGQ
Sbjct: 65 IRRMESAAGNLYKEKKIRGFCHLYSGQ 91
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 12/86 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EACAVGM+A M E D++I+AYR HGWT+L+G +V VL+ELTGR G
Sbjct: 91 QEACAVGMKAAMTEGDAVITAYRCHGWTWLLGATVTEVLAELTGRVAG------------ 138
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQ 264
GKGGSMHMY KNFYGGNGIVGAQ
Sbjct: 139 NVHGKGGSMHMYTKNFYGGNGIVGAQ 164
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 257 bits (657), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 145/180 (80%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
+NFYGGNGIVGAQ PLGTGIAFA +Y+ VC ++GDGA+NQGQ FE+ N+AKLW +P
Sbjct: 154 ENFYGGNGIVGAQQPLGTGIAFAMKYRKEKNVCITMFGDGATNQGQLFESMNMAKLWDLP 213
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
+YVCENNGYGMGT+A RSSASTDYYTRGDY+PGIWVDGMDVLAVR+A ++A + ++GK
Sbjct: 214 VLYVCENNGYGMGTAAARSSASTDYYTRGDYVPGIWVDGMDVLAVRQAVRWAKEWCNAGK 273
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELKE 180
GPL++E+ TYRYSGHSMSDPGTS+ RDPIT FK+K++ + L T DE+KE
Sbjct: 274 GPLMIEMATYRYSGHSMSDPGTSYRTREEVQEVRKTRDPITGFKDKIVTAGLVTEDEIKE 333
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%)
Query: 260 IVGAQTLKSLLKSISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTI 319
I T+ + +IS R ++EATF+TKPFKLHKL GP V VTK+DA+ YY QM TI
Sbjct: 8 IFKVPTVSPSVMAISVRLASTEATFQTKPFKLHKLDSGPDINVHVTKEDAVHYYTQMLTI 67
Query: 320 RRLETSAGNLYKEKVIRGFCHLYSGQ 345
RR+E++AGNLYKEK +RGFCHLYSGQ
Sbjct: 68 RRMESAAGNLYKEKKVRGFCHLYSGQ 93
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 57/86 (66%), Gaps = 12/86 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EACAVG +A M D+ ++AYR HGWTYL G SV VL ELTGR TG
Sbjct: 93 QEACAVGTKAAMDAGDAAVTAYRCHGWTYLSGSSVAKVLCELTGRITG------------ 140
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQ 264
GKGGSMHMY +NFYGGNGIVGAQ
Sbjct: 141 NVYGKGGSMHMYGENFYGGNGIVGAQ 166
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 140/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG GIA A +Y G VC LYGDGA+NQGQ FEAYN+A LW +P
Sbjct: 158 KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLP 217
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
CI++CENN YGMGTS ER++ASTDYY RGD+IPG+ VDGMD+L VREA+KFA Y SGK
Sbjct: 218 CIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGK 277
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+R DPI K++M+NS LA+V+ELKE
Sbjct: 278 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE 337
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 12/87 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EAC VG+ A + D +I+AYR HG+T+ G +V +L+ELTGRR GC
Sbjct: 97 QEACCVGLEAGINPTDHLITAYRAHGFTFNRGHAVRAILAELTGRRGGC----------- 145
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQT 265
AKGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 146 -AKGKGGSMHMYAKNFYGGNGIVGAQV 171
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R++A++ATFE K LH+L EGP +T++D L YYR MQT+RR+E A LYK+
Sbjct: 25 VASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQ 84
Query: 333 KVIRGFCHLYSGQ 345
K+IRGFCHL GQ
Sbjct: 85 KIIRGFCHLCDGQ 97
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 140/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG GIA A +Y G VC LYGDGA+NQGQ FEAYN+A LW +P
Sbjct: 158 KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLP 217
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
CI++CENN YGMGTS ER++ASTDYY RGD+IPG+ VDGMD+L VREA+KFA Y SGK
Sbjct: 218 CIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGK 277
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+R DPI K++M+NS LA+V+ELKE
Sbjct: 278 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE 337
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 12/87 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EAC VG+ A + D +I+AYR HG+T+ G+ V +L+ELTGRR GC
Sbjct: 97 QEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGC----------- 145
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQT 265
AKGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 146 -AKGKGGSMHMYAKNFYGGNGIVGAQV 171
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R++A++ATFE K LH+L EGP +T++D L YYR MQT+RR+E A LYK+
Sbjct: 25 VASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQ 84
Query: 333 KVIRGFCHLYSGQ 345
K+IRGFCHL GQ
Sbjct: 85 KIIRGFCHLCDGQ 97
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 140/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG GIA A +Y G VC LYGDGA+NQGQ FEAYN+A LW +P
Sbjct: 158 KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLP 217
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
CI++CENN YGMGTS ER++ASTDYY RGD+IPG+ VDGMD+L VREA+KFA Y SGK
Sbjct: 218 CIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGK 277
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+R DPI K++M+NS LA+V+ELKE
Sbjct: 278 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE 337
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 13/103 (12%)
Query: 163 FKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
+K+K++ D +EAC VG+ A + D +I+AYR HG+T+ G+SV +L+ELTG
Sbjct: 82 YKQKIIRGFCHLCDG-QEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTG 140
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQT 265
RR GC AKGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 141 RRGGC------------AKGKGGSMHMYAKNFYGGNGIVGAQV 171
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 52/73 (71%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R +A++ATFE K LH+L EGP +T++D L YYR MQT+RR+E A LYK+
Sbjct: 25 VASRHFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQ 84
Query: 333 KVIRGFCHLYSGQ 345
K+IRGFCHL GQ
Sbjct: 85 KIIRGFCHLCDGQ 97
>sp|P08559|ODPA_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3
Length = 390
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 140/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG GIA A +Y G VC LYGDGA+NQGQ FEAYN+A LW +P
Sbjct: 158 KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLP 217
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
CI++CENN YGMGTS ER++ASTDYY RGD+IPG+ VDGMD+L VREA++FA Y SGK
Sbjct: 218 CIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGK 277
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+R DPI K++M+NS LA+V+ELKE
Sbjct: 278 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE 337
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R++A++ATFE K LH+L EGP +T++D L YYR MQT+RR+E A LYK+
Sbjct: 25 VASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQ 84
Query: 333 KVIRGFCHLYSGQ 345
K+IRGFCHL GQ
Sbjct: 85 KIIRGFCHLCDGQ 97
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 13/103 (12%)
Query: 163 FKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
+K+K++ D +EAC VG+ A + D +I+AYR HG+T+ G+SV +L+ELTG
Sbjct: 82 YKQKIIRGFCHLCDG-QEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTG 140
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQT 265
R+ G CAKGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 141 RKGG------------CAKGKGGSMHMYAKNFYGGNGIVGAQV 171
>sp|P29804|ODPA_PIG Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial (Fragment) OS=Sus scrofa GN=PDHA1 PE=1
SV=1
Length = 389
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 140/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG GIA A +Y G VC LYGDGA+NQGQ FEAYN+A LW +P
Sbjct: 157 KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLP 216
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
C+++CENN YGMGTS ER++ASTDYY RGD+IPG+ VDGMD+L VREA++FA Y SGK
Sbjct: 217 CVFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGK 276
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+R DPI K++M+NS LA+V+ELKE
Sbjct: 277 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE 336
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R++A++ATFE K LH+L EGP +T++D L YYR MQT+RR+E A LYK+
Sbjct: 24 VASRTFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQ 83
Query: 333 KVIRGFCHLYSGQ 345
K+IRGFCHL GQ
Sbjct: 84 KIIRGFCHLCDGQ 96
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 13/103 (12%)
Query: 163 FKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
+K+K++ D +EAC VG+ A + D +I+AYR HG+T+ G+SV +L+ELTG
Sbjct: 81 YKQKIIRGFCHLCDG-QEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTG 139
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQT 265
RR G C KGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 140 RRGG------------CGKGKGGSMHMYAKNFYGGNGIVGAQV 170
>sp|Q5R490|ODPA_PONAB Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pongo abelii GN=PDHA1 PE=2 SV=1
Length = 390
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 139/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG GIA A +Y G VC LYGDGA+NQGQ F AYN+A LW +P
Sbjct: 158 KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFGAYNMAALWKLP 217
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
CI++CENN YGMGTS ER++ASTDYY RGD+IPG+ VDGMD+L VREA++FA Y SGK
Sbjct: 218 CIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGK 277
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+R DPI K++M+NS LA+V+ELKE
Sbjct: 278 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE 337
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R++A++ATFE K LH+L EGP +T++D L YYR MQT+RR+E A LYK+
Sbjct: 25 VASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQ 84
Query: 333 KVIRGFCHLYSGQ 345
K+IRGFCHL GQ
Sbjct: 85 KIIRGFCHLCDGQ 97
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 13/103 (12%)
Query: 163 FKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
+K+K++ D +EAC VG+ A + D +I+AYR HG+T+ G+SV +L+ELTG
Sbjct: 82 YKQKIIRGFCHLCDG-QEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTG 140
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQT 265
R+ G CAKGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 141 RKGG------------CAKGKGGSMHMYAKNFYGGNGIVGAQV 171
>sp|A5A6L0|ODPA_PANTR Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pan troglodytes GN=PDHA1 PE=2 SV=1
Length = 390
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 139/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG GIA A +Y G VC LYGDGA+NQGQ FEAYN+A LW +P
Sbjct: 158 KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLP 217
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
CI++CENN YGMGTS ER++ASTDYY RGD+IPG+ VDGMD+L VREA++FA Y SGK
Sbjct: 218 CIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGK 277
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMS PG S+R DPI K++M+NS LA+V+ELKE
Sbjct: 278 GPILMELQTYRYHGHSMSGPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE 337
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R++A++ATFE K LH+L EGP +T++D L YYR MQT+RR+E A LYK+
Sbjct: 25 VASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQ 84
Query: 333 KVIRGFCHLYSGQ 345
K+IRGFCHL GQ
Sbjct: 85 KIIRGFCHLCDGQ 97
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 13/103 (12%)
Query: 163 FKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
+K+K++ D +EAC VG+ A + D +I+AYR HG+T+ G+SV +L+ELTG
Sbjct: 82 YKQKIIRGFCHLCDG-QEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTG 140
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQT 265
R+ G CAKGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 141 RKGG------------CAKGKGGSMHMYAKNFYGGNGIVGAQV 171
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 149/197 (75%), Gaps = 16/197 (8%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
+NFYGGNGIVGAQ PLGTGIAFA +YK VC L+GDGA+NQGQ +E+ N+AKLW +P
Sbjct: 149 ENFYGGNGIVGAQQPLGTGIAFAMKYKKQKNVCITLFGDGATNQGQLYESMNMAKLWELP 208
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
+YVCENNGYGMGTSA RSSASTDYYTRGDY+PG WVDGMDVLAVR+A ++ + ++GK
Sbjct: 209 VLYVCENNGYGMGTSAARSSASTDYYTRGDYVPGFWVDGMDVLAVRQAIRWGKEWCNAGK 268
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELKE 180
GPL++E+ TYRY GHSMSDPGTS+ RDPIT FK+K++ + L T DELKE
Sbjct: 269 GPLMIEMATYRYGGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKE 328
Query: 181 ACAVGMRAVMREQDSII 197
+ + +E D+ +
Sbjct: 329 VD----KEIRKEVDAAV 341
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 67/88 (76%)
Query: 258 NGIVGAQTLKSLLKSISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQ 317
+ I T+ S + ++S R ++EATF+ KPFKLHKL GP + VTK+DAL YY QMQ
Sbjct: 1 SNIFKGPTVGSSVVAMSARLASTEATFQAKPFKLHKLDSGPDVNMHVTKEDALRYYTQMQ 60
Query: 318 TIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
TIRR+ET+AGNLYKEK +RGFCHLYSGQ
Sbjct: 61 TIRRMETAAGNLYKEKKVRGFCHLYSGQ 88
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 57/86 (66%), Gaps = 12/86 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EACAVGM+A M D+ I+AYR HGWTYL G V VL ELTGR TG
Sbjct: 88 QEACAVGMKAAMEPGDAAITAYRCHGWTYLSGSPVAKVLCELTGRITG------------ 135
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQ 264
GKGGSMHMY +NFYGGNGIVGAQ
Sbjct: 136 NVYGKGGSMHMYGENFYGGNGIVGAQ 161
>sp|Q8HXW9|ODPA_MACFA Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Macaca fascicularis GN=PDHA1 PE=2 SV=1
Length = 390
Score = 252 bits (644), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 139/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFY GNGIVGAQVPLG GIA A +Y G VC LYGDGA++QGQ FEAYN+A LW +P
Sbjct: 158 KNFYRGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAADQGQIFEAYNMAALWKLP 217
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
CI++CENN YGMGTS ER++ASTDYY RGD+IPG+ VDGMD+L VREA++FA Y SGK
Sbjct: 218 CIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGK 277
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+R DPI K++M+NS LA+V+ELKE
Sbjct: 278 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE 337
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R++A++ATFE K LH+L EGP +T++D L YYR MQT+RR+E A LYK+
Sbjct: 25 VASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQ 84
Query: 333 KVIRGFCHLYSGQ 345
K+IRGFCHL GQ
Sbjct: 85 KIIRGFCHLCDGQ 97
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 66/103 (64%), Gaps = 13/103 (12%)
Query: 163 FKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
+K+K++ D +EAC VG+ A + D +I+AYR HG+T+ G+SV +L+ELTG
Sbjct: 82 YKQKIIRGFCHLCDG-QEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVREILAELTG 140
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQT 265
R+ G CAKGKGGS HMYAKNFY GNGIVGAQ
Sbjct: 141 RKGG------------CAKGKGGSTHMYAKNFYRGNGIVGAQV 171
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 252 bits (644), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 139/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG GIA A +Y +C LYGDGA+NQGQ FEAYN+A LW +P
Sbjct: 131 KNFYGGNGIVGAQVPLGVGIALACKYNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLP 190
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
CI++CENN YGMGTS ER++ASTDYY RGD+IPGI VDGMDVL VREA+KFA Y SGK
Sbjct: 191 CIFICENNRYGMGTSVERAAASTDYYKRGDFIPGIMVDGMDVLCVREATKFAAAYCRSGK 250
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+R DPI K++M+N+ LA+++ELKE
Sbjct: 251 GPMLMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKE 310
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 12/87 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EAC +G+ A + D +I+AYR HG+TY G+ V +L+ELTGRR GC
Sbjct: 70 QEACCMGLEAGINPTDHVITAYRAHGFTYTRGLPVREILAELTGRRGGC----------- 118
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQT 265
AKGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 119 -AKGKGGSMHMYAKNFYGGNGIVGAQV 144
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 276 RSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVI 335
R++A++ATF+ K +H+L EGP +T+++ L YY+ MQT+RR+E A LYK+K+I
Sbjct: 1 RNFANDATFDIKKCDVHRLEEGPPTTAVLTREEGLKYYKIMQTVRRMELKADQLYKQKII 60
Query: 336 RGFCHLYSGQ 345
RGFCHLY GQ
Sbjct: 61 RGFCHLYDGQ 70
>sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1
Length = 388
Score = 249 bits (636), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 140/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQ PLG GIA A +YKG +C LYGDGA+NQGQ EA+N+A LW +P
Sbjct: 156 KNFYGGNGIVGAQGPLGAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLP 215
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
C+++CENN YGMGTS ER++AS DYY RG++IPG+ VDGMDVL VREA+KFA NY SGK
Sbjct: 216 CVFICENNLYGMGTSTERAAASPDYYKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGK 275
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELKE 180
GP+++E+ TYRY GHSMSDPG S+ RDPI +++M+NS+LATV+ELKE
Sbjct: 276 GPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKE 335
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 58/86 (67%), Gaps = 12/86 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EAC VG+ A + D +I++YR HG Y G+SV +L+ELTGRR GC
Sbjct: 95 QEACCVGLEAGINPSDHVITSYRAHGVCYTRGLSVRSILAELTGRRGGC----------- 143
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQ 264
AKGKGGSMHMY KNFYGGNGIVGAQ
Sbjct: 144 -AKGKGGSMHMYTKNFYGGNGIVGAQ 168
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 273 ISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKE 332
++ R+ +++ATFE K L+ L EGP +T+ + L YYR M T+RR+E A LYK+
Sbjct: 23 VASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGLKYYRMMLTVRRMELKADQLYKQ 82
Query: 333 KVIRGFCHLYSGQ 345
K IRGFCHL GQ
Sbjct: 83 KFIRGFCHLCDGQ 95
>sp|Q06437|ODPAT_RAT Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=1
SV=1
Length = 391
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 141/180 (78%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG G+A A +Y G +C ALYGDGA+NQGQ FEAYN++ LW +P
Sbjct: 159 KNFYGGNGIVGAQVPLGAGVALACKYLKNGQICLALYGDGAANQGQVFEAYNMSALWKLP 218
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
C+++CENN YGMGT+ ERS+ASTDY+ +G IPG+ V+GMD+L+VREA+KFA ++ SGK
Sbjct: 219 CVFICENNRYGMGTAIERSAASTDYHKKGFVIPGLRVNGMDILSVREATKFAADHCRSGK 278
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+V+E+ TYRY GHSMSDPG S+R DPI +E+M+++ L++V+ELKE
Sbjct: 279 GPIVMELQTYRYHGHSMSDPGISYRTREEVQNVRSKSDPIMLLRERMISNNLSSVEELKE 338
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 258 NGIVGAQTLKSLLKSISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQ 317
+G+V L+ LL S+ ++++AT + K L+ L +GP +T+++AL YYR MQ
Sbjct: 14 SGMVQKPALRGLLSSLK---FSNDATCDIKKCDLYLLEQGPPTSTVLTREEALKYYRNMQ 70
Query: 318 TIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
IRR+E A LYK+K IRGFCHL GQ
Sbjct: 71 VIRRMELKADQLYKQKFIRGFCHLCDGQ 98
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 65/103 (63%), Gaps = 13/103 (12%)
Query: 163 FKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
+K+K + D +EAC VG+ A + D II++YR HG Y G+SV +L+ELTG
Sbjct: 83 YKQKFIRGFCHLCDG-QEACNVGLEAGINPTDHIITSYRAHGLCYTRGLSVKSILAELTG 141
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQT 265
R+ G CAKGKGGSMHMYAKNFYGGNGIVGAQ
Sbjct: 142 RKGG------------CAKGKGGSMHMYAKNFYGGNGIVGAQV 172
>sp|P35487|ODPAT_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Mus musculus GN=Pdha2 PE=2 SV=1
Length = 391
Score = 241 bits (615), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 140/180 (77%), Gaps = 12/180 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQVPLG G+AFA +Y G VC ALYGDGA+NQGQ FEAYN++ LW +P
Sbjct: 159 KNFYGGNGIVGAQVPLGAGVAFACKYLKNGQVCLALYGDGAANQGQVFEAYNMSALWKLP 218
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
C+++CENN YGMGTS ERS+ASTDY+ +G IPG+ V+GMD+L VREA+KFA ++ SGK
Sbjct: 219 CVFICENNLYGMGTSNERSAASTDYHKKGFIIPGLRVNGMDILCVREATKFAADHCRSGK 278
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKE 180
GP+V+E+ TYRY GHSMSDPG S+R DPI +E+++++ L+ ++ELKE
Sbjct: 279 GPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRERIISNNLSNIEELKE 338
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 258 NGIVGAQTLKSLLKSISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQ 317
+G+V L+ LL S+ ++++AT + K L++L EGP +T+ +AL YYR MQ
Sbjct: 14 SGMVQKPALRGLLSSLK---FSNDATCDIKKCDLYRLEEGPPTSTVLTRAEALKYYRTMQ 70
Query: 318 TIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
IRR+E A LYK+K IRGFCHL GQ
Sbjct: 71 VIRRMELKADQLYKQKFIRGFCHLCDGQ 98
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 65/103 (63%), Gaps = 13/103 (12%)
Query: 163 FKEKMLNSELATVDELKEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
+K+K + D +EAC VG+ A + D +I++YR HG+ Y G+SV +L+ELTG
Sbjct: 83 YKQKFIRGFCHLCDG-QEACCVGLEAGINPTDHVITSYRAHGFCYTRGLSVKSILAELTG 141
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAKNFYGGNGIVGAQT 265
R+ G CAKGKGGSMHMY KNFYGGNGIVGAQ
Sbjct: 142 RKGG------------CAKGKGGSMHMYGKNFYGGNGIVGAQV 172
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 134/178 (75%), Gaps = 12/178 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQ PLG GIAFA +Y TG VC A+YGDGA+NQGQ FEA+N+A LW +P
Sbjct: 149 KNFYGGNGIVGAQCPLGAGIAFAQKYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLP 208
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
I++CENN YGMGTS +RS+A D+YTRG Y+ G+ VDGMDV AV+EA K+A + +G
Sbjct: 209 VIFICENNKYGMGTSQKRSTAGHDFYTRGHYVAGLKVDGMDVFAVKEAGKYAAEWCRAGN 268
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDEL 178
GP++LE+ TYRY GHSMSDPG ++ RDPI + ++ +L++++AT D+L
Sbjct: 269 GPIILEMDTYRYVGHSMSDPGITYRTREEVNHVRQTRDPIENIRQIILDNKIATEDQL 326
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 12/86 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA G+ + + + D II+AYR H + G + + +EL + TGC+KGKG
Sbjct: 88 QEAVCAGLESAITKDDHIITAYRDHTYMLSRGATPEEIFAELLMKETGCSKGKG------ 141
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQ 264
GSMHM+ KNFYGGNGIVGAQ
Sbjct: 142 ------GSMHMFTKNFYGGNGIVGAQ 161
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 276 RSYASEATFETKPFKLHK--LSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEK 333
R++AS++ FK L +GPS+ K + + ++ +M RRLET LYK+K
Sbjct: 17 RTFASKSGEIKHNFKKADTYLCDGPSDSTVTNKDELISFFTEMSRFRRLETVCDGLYKKK 76
Query: 334 VIRGFCHLYSGQ 345
+IRGFCHLY+GQ
Sbjct: 77 LIRGFCHLYTGQ 88
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 226 bits (575), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 129/179 (72%), Gaps = 12/179 (6%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
KNFYGGNGIVGAQ+PLG GI FA +Y FALYGDGASNQGQ FEA+N+AKLWG+P
Sbjct: 175 KNFYGGNGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGDGASNQGQAFEAFNMAKLWGLP 234
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGK 132
I+ CENN YGMGTSAERSSA T++Y RG YIPG+ V+GMDVLAV +ASKFA Y
Sbjct: 235 VIFACENNKYGMGTSAERSSAMTEFYKRGQYIPGLLVNGMDVLAVLQASKFAKKYTVENS 294
Query: 133 GPLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELK 179
PL++E VTYRY GHSMSDPGT++ RDPI K+ ++ +A +ELK
Sbjct: 295 QPLLMEFVTYRYGGHSMSDPGTTYRSREEVQKVRAARDPIEGLKKHIMEWGVANANELK 353
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 12/86 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA A G+ + DSII++YR HG+ Y G+S+ ++ EL GR+ G
Sbjct: 114 QEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGELMGRQCG------------ 161
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQ 264
+KGKGGSMH++AKNFYGGNGIVGAQ
Sbjct: 162 ASKGKGGSMHIFAKNFYGGNGIVGAQ 187
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 298 PSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
PS ++ VTK + L Y +M TIRRLE + LYK K IRGFCHL GQ
Sbjct: 67 PSTEIEVTKGELLGLYEKMVTIRRLELACDALYKAKKIRGFCHLSIGQ 114
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 225 bits (574), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 137/197 (69%), Gaps = 13/197 (6%)
Query: 15 FYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCI 74
FYGGNGIVGAQVPLG G+AFA QYK FALYGDGASNQGQ FE++N+AKLW +P +
Sbjct: 172 FYGGNGIVGAQVPLGAGLAFAHQYKHEDACSFALYGDGASNQGQVFESFNMAKLWNLPAV 231
Query: 75 YVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKGP 134
+ CENN YGMGT+A RSSA T+Y+ RG YIPG+ V+GMD+LAV +ASKFA ++ SG GP
Sbjct: 232 FCCENNKYGMGTAAARSSAMTEYFKRGQYIPGLKVNGMDILAVYQASKFAKDWTVSGNGP 291
Query: 135 LVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELKEAC 182
+VLE TYRY GHSMSDPGT++R DPI K +L +AT DE+K A
Sbjct: 292 IVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEDEIK-AY 350
Query: 183 AVGMRAVMREQDSIISA 199
R + EQ + A
Sbjct: 351 DKAARKYVDEQVELADA 367
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 12/87 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA AVG+ + ++D++I++YR HG+TY+ G +V VL+EL GRRTG +S+
Sbjct: 109 QEAIAVGIENAITKRDTVITSYRCHGFTYMRGAAVQAVLAELMGRRTG-------VSF-- 159
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQT 265
GKGGSMH+YA FYGGNGIVGAQ
Sbjct: 160 ---GKGGSMHLYAPGFYGGNGIVGAQV 183
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 294 LSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
L + P TK + L Y+ M +RR+E + LYK K IRGFCH GQ
Sbjct: 58 LLDVPELSYQTTKSNLLQMYKDMIIVRRMEMACDALYKAKKIRGFCHSSVGQ 109
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 130/177 (73%), Gaps = 12/177 (6%)
Query: 15 FYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCI 74
FYGGNGIVGAQVPLG G+AFA QYK F LYGDGASNQGQ FE++N+AKLW +P +
Sbjct: 180 FYGGNGIVGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVV 239
Query: 75 YVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKGP 134
+ CENN YGMGT+A RSSA T+Y+ RG YIPG+ V+GMD+LAV +ASKFA ++ SGKGP
Sbjct: 240 FCCENNKYGMGTAASRSSAMTEYFKRGQYIPGLKVNGMDILAVYQASKFAKDWCLSGKGP 299
Query: 135 LVLEVVTYRYSGHSMSDPGTSFR------------DPITSFKEKMLNSELATVDELK 179
LVLE TYRY GHSMSDPGT++R DPI K +++ +AT E+K
Sbjct: 300 LVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVK 356
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 12/87 (13%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA AVG+ + + DSII++YR HG+T++ G SV VL+EL GRR G +S+
Sbjct: 117 QEAIAVGIENAITKLDSIITSYRCHGFTFMRGASVKAVLAELMGRRAG-------VSY-- 167
Query: 239 CAKGKGGSMHMYAKNFYGGNGIVGAQT 265
GKGGSMH+YA FYGGNGIVGAQ
Sbjct: 168 ---GKGGSMHLYAPGFYGGNGIVGAQV 191
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 281 EATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCH 340
E++FE+ + E P +K L Y+ M IRR+E + LYK K IRGFCH
Sbjct: 59 ESSFESY------MLEPPDLSYETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCH 112
Query: 341 LYSGQ 345
L GQ
Sbjct: 113 LSVGQ 117
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 135/197 (68%), Gaps = 17/197 (8%)
Query: 14 NFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPC 73
+FYGG+GIVGAQVPLG GIAFA +Y V FALYGDGA+NQGQ FEA NI+ LW +P
Sbjct: 159 SFYGGHGIVGAQVPLGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPA 218
Query: 74 IYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKG 133
I VCENN YGMGT+ R++ S YY RGDY+PG+ VDGMD AV++A KFA +A KG
Sbjct: 219 ILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDAFAVKQACKFAKQHALE-KG 277
Query: 134 PLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELKEA 181
P++LE+ TYRY GHSMSDPG+++ RDPI K+ +L+ +LAT ELK+
Sbjct: 278 PIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDM 337
Query: 182 CAVGMRAVMREQDSIIS 198
+ + +E D I+
Sbjct: 338 ----EKEIRKEVDDAIA 350
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 14/89 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA A+GM A + ++D+II+AYR H G S+ V SEL GR+ GC
Sbjct: 95 QEAVAIGMEAAITKKDAIITAYRDHCIFLGRGGSLHEVFSELMGRQAGC----------- 143
Query: 239 CAKGKGGSMHMYAK--NFYGGNGIVGAQT 265
+KGKGGSMH Y K +FYGG+GIVGAQ
Sbjct: 144 -SKGKGGSMHFYKKESSFYGGHGIVGAQV 171
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 283 TFETK-PFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHL 341
T ET PF H L + PS V + Q+ L ++R M +RR+E +A +LYK K+IRGFCHL
Sbjct: 33 TIETSLPFTAH-LCDPPSRSVESSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHL 91
Query: 342 YSGQ 345
Y GQ
Sbjct: 92 YDGQ 95
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 136/197 (69%), Gaps = 17/197 (8%)
Query: 14 NFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPC 73
NFYGG+GIVGAQVPLG G+AFA +Y+ FALYGDGA+NQGQ FEA NI+ LW +P
Sbjct: 160 NFYGGHGIVGAQVPLGCGLAFAQKYRKEETATFALYGDGAANQGQLFEALNISALWKLPA 219
Query: 74 IYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKG 133
I VCENN YGMGT+ R++ S YY RGDY+PG+ VDGMDVLAV++A KFA +A + G
Sbjct: 220 ILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHAIAN-G 278
Query: 134 PLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELKEA 181
P+VLE+ TYRY GHSMSDPG+++ RDPI ++ +L +LAT ELK+
Sbjct: 279 PIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKDM 338
Query: 182 CAVGMRAVMREQDSIIS 198
+ + +E D I+
Sbjct: 339 ----EKEIRKEVDDAIA 351
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 14/88 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA AVGM A + DSII+AYR H G + +EL GR+ GC
Sbjct: 96 QEAVAVGMEAAITRSDSIITAYRDHCTYLARGGDLVSAFAELMGRQAGC----------- 144
Query: 239 CAKGKGGSMHMYAK--NFYGGNGIVGAQ 264
++GKGGSMH Y K NFYGG+GIVGAQ
Sbjct: 145 -SRGKGGSMHFYKKDANFYGGHGIVGAQ 171
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 273 ISGRSYASEA---TFETK-PFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGN 328
I+ RS + T ET PF H + + PS VT T + L ++R M +RR+E +A +
Sbjct: 21 IAARSISDSTAPLTIETSVPFTSH-IVDPPSRDVTTTPAELLTFFRDMSVMRRMEIAADS 79
Query: 329 LYKEKVIRGFCHLYSGQ 345
LYK K+IRGFCHLY GQ
Sbjct: 80 LYKAKLIRGFCHLYDGQ 96
>sp|Q654V6|ODPA2_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os06g0246500 PE=2
SV=1
Length = 398
Score = 211 bits (537), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 127/179 (70%), Gaps = 13/179 (7%)
Query: 14 NFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPC 73
NFYGG+GIVGAQVPLG G+AFA +Y+ V F LYGDGA+NQGQ FEA N+A LW +P
Sbjct: 168 NFYGGHGIVGAQVPLGCGLAFAQRYRKEAAVTFDLYGDGAANQGQLFEALNMAALWKLPV 227
Query: 74 IYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKG 133
+ VCENN YGMGT+ R+S S YY RGDY+PG+ VDGMDVLAV++A KFA +A G
Sbjct: 228 VLVCENNHYGMGTAEWRASKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKQHALEN-G 286
Query: 134 PLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELKE 180
P++LE+ TYRY GHSMSDPG+++ RDPI ++ +L + AT ELK+
Sbjct: 287 PIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLLAHDFATTQELKD 345
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 79/165 (47%), Gaps = 37/165 (22%)
Query: 124 AVNYASSGKGPLVLEVVTYRYSGHSMSDP----GTSFRDPITSFKE--KMLNSELATVDE 177
+V S PL +E + Y H + P T+ R+ T F++ M +E+A D
Sbjct: 30 SVRGVSDSTEPLTIET-SVPYKSHIVDPPPREVATTARELATFFRDMSAMRRAEIAA-DS 87
Query: 178 L---------------KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTG 222
L +EA AVGM A D+II+AYR H G + + +EL G
Sbjct: 88 LYKAKLIRGFCHLYDGQEAVAVGMEAATTRADAIITAYRDHCAYLARGGDLAALFAELMG 147
Query: 223 RRTGCAKGKGPISWECCAKGKGGSMHMYAK--NFYGGNGIVGAQT 265
RR GC ++GKGGSMH+Y K NFYGG+GIVGAQ
Sbjct: 148 RRGGC------------SRGKGGSMHLYKKDANFYGGHGIVGAQV 180
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 272 SISGRSYASEA-TFETK-PFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNL 329
S+ G S ++E T ET P+K H + + P +V T ++ ++R M +RR E +A +L
Sbjct: 30 SVRGVSDSTEPLTIETSVPYKSH-IVDPPPREVATTARELATFFRDMSAMRRAEIAADSL 88
Query: 330 YKEKVIRGFCHLYSGQ 345
YK K+IRGFCHLY GQ
Sbjct: 89 YKAKLIRGFCHLYDGQ 104
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 207 bits (528), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 127/179 (70%), Gaps = 13/179 (7%)
Query: 14 NFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPC 73
+FYGG+GIVGAQ+PLG G+AFA +Y V FALYGDGA+NQGQ FEA NI+ LW +P
Sbjct: 163 SFYGGHGIVGAQIPLGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPA 222
Query: 74 IYVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKG 133
I VCENN YGMGT+ RS+ S Y+ RGDY+PG+ VDGMD LAV++A KFA +A G
Sbjct: 223 ILVCENNHYGMGTATWRSAKSPAYFKRGDYVPGLKVDGMDALAVKQACKFAKEHALKN-G 281
Query: 134 PLVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELKE 180
P++LE+ TYRY GHSMSDPG+++ RDPI ++ +L ++AT ELK+
Sbjct: 282 PIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKD 340
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 14/88 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA AVGM A + ++D+II++YR H G + SEL GR+TGC
Sbjct: 99 QEALAVGMEAAITKKDAIITSYRDHCTFIGRGGKLVDAFSELMGRKTGC----------- 147
Query: 239 CAKGKGGSMHMYAKN--FYGGNGIVGAQ 264
+ GKGGSMH Y K+ FYGG+GIVGAQ
Sbjct: 148 -SHGKGGSMHFYKKDASFYGGHGIVGAQ 174
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 279 ASEATFETK-PFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRG 337
+S T ET PF H L E PS V + ++ L ++R M +RR+E +A +LYK K+IRG
Sbjct: 33 SSPITIETAVPFTSH-LCESPSRSVETSSEEILAFFRDMARMRRMEIAADSLYKAKLIRG 91
Query: 338 FCHLYSGQ 345
FCHLY GQ
Sbjct: 92 FCHLYDGQ 99
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 141/225 (62%), Gaps = 28/225 (12%)
Query: 15 FYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCI 74
FYGG+GIVGAQVPLG G+AF +Y V FALYGDGA+NQGQ FEA NI+ LW +P I
Sbjct: 168 FYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNISALWDLPAI 227
Query: 75 YVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKGP 134
VCENN YGMGT+ RS+ S Y+ RGDY+PG+ VDGMD LAV++A KFA +A GP
Sbjct: 228 LVCENNHYGMGTATWRSAKSPAYFKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGP 286
Query: 135 LVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELK--- 179
++LE+ TYRY GHSMSDPG+++ RDPI ++ +L+ ++AT ELK
Sbjct: 287 IILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIATEKELKDTE 346
Query: 180 --------EACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGV 216
EA A + M + + S V G+ GV FGV
Sbjct: 347 KEVRKEVDEAIAKAKDSPMPDPSDLFSNVYVKGY----GVEAFGV 387
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 53/88 (60%), Gaps = 14/88 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA AVGM A ++D II+AYR H G ++ V +EL GRR GC
Sbjct: 103 QEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLLRVYAELMGRRDGC----------- 151
Query: 239 CAKGKGGSMHMYAKN--FYGGNGIVGAQ 264
+KGKGGSMH Y K+ FYGG+GIVGAQ
Sbjct: 152 -SKGKGGSMHFYKKDSGFYGGHGIVGAQ 178
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 268 SLLKSISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAG 327
+L + IS + A+ + PF H + PS VT + + L ++R M +RR+E +A
Sbjct: 27 TLNRPISSDTTATLTIETSLPFTAHN-CDPPSRSVTTSPSELLSFFRTMALMRRMEIAAD 85
Query: 328 NLYKEKVIRGFCHLYSGQ 345
+LYK +IRGFCHLY GQ
Sbjct: 86 SLYKANLIRGFCHLYDGQ 103
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 124/178 (69%), Gaps = 13/178 (7%)
Query: 15 FYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCI 74
FYGG+GIVGAQVPLG G+AFA +YK V FA+YGDGA+NQGQ FEA N+A LW +P I
Sbjct: 162 FYGGHGIVGAQVPLGIGLAFAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAI 221
Query: 75 YVCENNGYGMGTSAERSSASTDYYTRGDYIPGIWVDGMDVLAVREASKFAVNYASSGKGP 134
VCENN YGMGT+ R++ S YY RGDY+PG+ VDGMDV AV++A FA +A GP
Sbjct: 222 LVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLRVDGMDVFAVKQACTFAKQHALKN-GP 280
Query: 135 LVLEVVTYRYSGHSMSDPGTSF------------RDPITSFKEKMLNSELATVDELKE 180
++LE+ TYRY GHSMSDPG+++ RDP+ + +L +AT ELK+
Sbjct: 281 IILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKD 338
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 36/145 (24%)
Query: 144 YSGHSMSDPG----TSFRDPITSFKE--KMLNSELATVDEL---------------KEAC 182
++ H++ P TS ++ +T FK+ +M E+A D L +EA
Sbjct: 42 FTSHNIDPPSRSVETSPKELMTFFKDMTEMRRMEIA-ADSLYKAKLIRGFCHLYDGQEAV 100
Query: 183 AVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWECCAKG 242
AVGM A + ++D II+AYR H G ++ +EL GRR GC ++G
Sbjct: 101 AVGMEAAITKKDCIITAYRDHCIFLGRGGTLVEAFAELMGRRDGC------------SRG 148
Query: 243 KGGSMHMYAKN--FYGGNGIVGAQT 265
KGGSMH Y K FYGG+GIVGAQ
Sbjct: 149 KGGSMHFYKKESGFYGGHGIVGAQV 173
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 271 KSISGRSYASEATFETKPFKLHKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLY 330
+ +S S A+ + PF H + + PS V + ++ + +++ M +RR+E +A +LY
Sbjct: 24 RRLSSDSTATITVETSLPFTSHNI-DPPSRSVETSPKELMTFFKDMTEMRRMEIAADSLY 82
Query: 331 KEKVIRGFCHLYSGQ 345
K K+IRGFCHLY GQ
Sbjct: 83 KAKLIRGFCHLYDGQ 97
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 123/181 (67%), Gaps = 13/181 (7%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
K+FYGG+GIVGAQV LGTG+AFA +Y+G V A +GDGA+NQGQ +E++N+A LW +P
Sbjct: 135 KHFYGGHGIVGAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAALWKLP 194
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASS 130
IY+ ENN Y MGTS R+SA TD+ RG IPG VDGMDV AV+ A+ AV + S
Sbjct: 195 VIYIVENNRYAMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRS 254
Query: 131 GKGPLVLEVVTYRYSGHSMSDPGT-----------SFRDPITSFKEKMLNSELATVDELK 179
GKGP++LE++TYRY GHSMSDP S DPI K ++ + AT DELK
Sbjct: 255 GKGPIILEMLTYRYRGHSMSDPAKYRSKDEVQKMRSEHDPIEQVKARLTDKGWATEDELK 314
Query: 180 E 180
+
Sbjct: 315 Q 315
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 14/89 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA VGM+ ++E D +I+ YR HG G+S GV++ELTGRR G +KGKG
Sbjct: 72 QEAVVVGMQLALKEGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGG----- 126
Query: 239 CAKGKGGSMHMYA--KNFYGGNGIVGAQT 265
SMHM++ K+FYGG+GIVGAQ
Sbjct: 127 -------SMHMFSKEKHFYGGHGIVGAQV 148
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 305 TKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
+K+D L YR+M IRR E AG LY I GFCHLY GQ
Sbjct: 32 SKEDDLKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQ 72
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 181 bits (459), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 128/205 (62%), Gaps = 23/205 (11%)
Query: 15 FYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCI 74
F+GGNGIVGAQVPLG G+AFA +Y+ GG A +GDG++NQGQ +EAYN+A LW +P I
Sbjct: 141 FFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVYEAYNMAALWKLPVI 200
Query: 75 YVCENNGYGMGTSAERSSASTDYYTRGD--YIPGIWVDGMDVLAVREASKFAVNYASSGK 132
+V ENNGY MGTS +R++A T RG IP + VDGMDVL VR A+ AV++ +GK
Sbjct: 201 FVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDWVQAGK 260
Query: 133 GPLVLEVVTYRYSGHSMSDPG-----------TSFRDPITSFKEKML-----NSELATVD 176
GP++LE+ TYRY GHSMSDP DP+ + K+ + +EL +D
Sbjct: 261 GPIILEMKTYRYRGHSMSDPARYRSREEVNDMKENHDPLDNLKKDLFAAGVPEAELVKLD 320
Query: 177 E-----LKEACAVGMRAVMREQDSI 196
E +KEA +A + + +
Sbjct: 321 EDIRQQVKEAADFAEKAPLPADEEL 345
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 179 KEACAVGMRAVMRE-QDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWE 237
+EA AVG++A ++ +DS+I+ YR HG G+ V++ELTGR +G
Sbjct: 75 QEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASG----------- 123
Query: 238 CCAKGKGGSMHMYA--KNFYGGNGIVGAQT 265
+ GKGGSMHM++ F+GGNGIVGAQ
Sbjct: 124 -ISHGKGGSMHMFSTEHKFFGGNGIVGAQV 152
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 292 HKLSEGPSNKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
H L P + +++ L +YR+M IRR E G LY +I GFCHLY GQ
Sbjct: 23 HDLPPIPG-RYHADREELLEFYRRMLMIRRFEERCGQLYGLGLIAGFCHLYIGQ 75
>sp|Q4UKQ6|ODPA_RICFE Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhA PE=3
SV=1
Length = 326
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 114/181 (62%), Gaps = 12/181 (6%)
Query: 12 PKNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGI 71
P FYGG+GIVGAQVP+GTG+AFA +Y GT +CF GDGA NQGQ +EA+N+A LWG+
Sbjct: 113 PNKFYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGL 172
Query: 72 PCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYAS 129
P +Y+ ENN Y MGTS RS+ D Y +G+ I G +DGMD + +K A Y
Sbjct: 173 PVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAEYVR 232
Query: 130 SGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKMLNSELATVDELK 179
PL+LEV TYRY GHSMSDP RDP+ ++ +L+++ AT +LK
Sbjct: 233 ENSFPLILEVKTYRYRGHSMSDPAKYRSKEEVEQYKERDPLVIIRKTILDNKYATEADLK 292
Query: 180 E 180
E
Sbjct: 293 E 293
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + V ++ DS I++YR H L G VL+EL GR TGC
Sbjct: 51 QEAVISAVDTVKQKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGC----------- 99
Query: 239 CAKGKGGSMHMY--AKNFYGGNGIVGAQT 265
+KGKGGSMH++ FYGG+GIVGAQ
Sbjct: 100 -SKGKGGSMHLFDIPNKFYGGHGIVGAQV 127
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 301 KVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
K TK++ + ++ M +RR E G LY I GFCHLY GQ
Sbjct: 7 KYKPTKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQ 51
>sp|Q1RJX4|ODPA_RICBR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
bellii (strain RML369-C) GN=pdhA PE=3 SV=1
Length = 326
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 113/181 (62%), Gaps = 12/181 (6%)
Query: 12 PKNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGI 71
P FYGG+GIVGAQVP+GTG+AFA +Y GT +CF GDGA NQGQ +EA+N+A LWG+
Sbjct: 113 PNKFYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMAALWGL 172
Query: 72 PCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYAS 129
P +Y+ ENN Y MGTS RS+ D Y +G+ I G ++GMD + + K A Y
Sbjct: 173 PVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVR 232
Query: 130 SGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKMLNSELATVDELK 179
PL+LEV TYRY GHSMSDP RDPIT ++ +L + A+ +LK
Sbjct: 233 ENSMPLILEVKTYRYRGHSMSDPAKYRSKEEVETYKERDPITEIRKIILENNYASEADLK 292
Query: 180 E 180
E
Sbjct: 293 E 293
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + V +++DS++++YR H L G VL+EL GR TGC
Sbjct: 51 QEAVISAVDMVKQKEDSMVTSYRDHAHIILAGTEPKYVLAELMGRATGC----------- 99
Query: 239 CAKGKGGSMHMY--AKNFYGGNGIVGAQT 265
+KGKGGSMH++ FYGG+GIVGAQ
Sbjct: 100 -SKGKGGSMHLFDVPNKFYGGHGIVGAQV 127
Score = 38.1 bits (87), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 301 KVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
K K++ + ++ M +RR E G LY I GFCHLY GQ
Sbjct: 7 KYKPVKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQ 51
>sp|Q68XA9|ODPA_RICTY Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhA PE=3
SV=1
Length = 326
Score = 174 bits (442), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 112/180 (62%), Gaps = 12/180 (6%)
Query: 12 PKNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGI 71
P FYGG+GIVGAQVP+GTG+AFA +Y GT +CF GDGA NQGQ +EA+N+A LWG+
Sbjct: 113 PNKFYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGL 172
Query: 72 PCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYAS 129
P +Y+ ENN Y MGTS RS+ D Y +G+ I G +DGMD + +K Y
Sbjct: 173 PVVYIIENNEYSMGTSVSRSTFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVR 232
Query: 130 SGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKMLNSELATVDELK 179
P++LEV TYRY GHSMSDP RD + ++ +L+++ AT ++LK
Sbjct: 233 ENSFPVILEVKTYRYRGHSMSDPAKYRSKEEVAKYKERDTLVRIRQIILDNKYATEEDLK 292
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + + ++ DS I++YR H L G VL+EL GR TGC
Sbjct: 51 QEAVISAVELIKKKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGC----------- 99
Query: 239 CAKGKGGSMHMY--AKNFYGGNGIVGAQT 265
+KGKGGSMH++ FYGG+GIVGAQ
Sbjct: 100 -SKGKGGSMHLFDIPNKFYGGHGIVGAQV 127
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 313 YRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
++ M +RR E G LY I GFCHLY GQ
Sbjct: 19 FKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQ 51
>sp|Q92IS3|ODPA_RICCN Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhA PE=3
SV=1
Length = 326
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 117/193 (60%), Gaps = 13/193 (6%)
Query: 12 PKNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGI 71
P FYGG+GIVGAQVP+GTG+AF +Y T +CF GDGA NQGQ +EA+N+A LWG+
Sbjct: 113 PNKFYGGHGIVGAQVPIGTGLAFVEKYNDTHNICFTFLGDGAVNQGQVYEAFNMAALWGL 172
Query: 72 PCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYAS 129
P +Y+ ENN Y MGTS RS+ D Y +G I G +DGMD + + SK A Y
Sbjct: 173 PVVYIIENNEYSMGTSVARSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVR 232
Query: 130 SGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKMLNSELATVDELK 179
PL+LEV TYRY GHSMSDP RDP+ ++ +L+++ T +LK
Sbjct: 233 ENSFPLILEVKTYRYRGHSMSDPAKYRSKEEVEQYKERDPLVIIRKTILDNKYVTEADLK 292
Query: 180 EACAVGMRAVMRE 192
A ++ +++E
Sbjct: 293 -AIEQSVKEIVKE 304
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + V ++ DS I++YR H L G VL+EL GR TGC
Sbjct: 51 QEAVISAIDMVKQKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGC----------- 99
Query: 239 CAKGKGGSMHMY--AKNFYGGNGIVGAQT 265
+KGKGGSMH++ FYGG+GIVGAQ
Sbjct: 100 -SKGKGGSMHLFNVPNKFYGGHGIVGAQV 127
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 301 KVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
K TK++ + ++ M +RR E G LY I GFCHLY GQ
Sbjct: 7 KYKPTKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQ 51
>sp|Q9ZDR4|ODPA_RICPR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhA PE=3 SV=1
Length = 326
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 117/192 (60%), Gaps = 13/192 (6%)
Query: 12 PKNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGI 71
P FYGG+GIVGAQVP+GTG+AFA +Y GT +CF GDGA NQGQ +EA+N+A LWG+
Sbjct: 113 PNKFYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGL 172
Query: 72 PCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYAS 129
P +Y+ ENN Y MGTS RS+ D Y +G+ I G +DGMD + +K Y
Sbjct: 173 PIVYIIENNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVR 232
Query: 130 SGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKMLNSELATVDELK 179
P++LEV TYRY GHSMSDP RD + +E +L+++ AT +LK
Sbjct: 233 ENSFPVILEVKTYRYRGHSMSDPAKYRSKEEVEKYKERDTLVRIREIILDNKYATEADLK 292
Query: 180 EACAVGMRAVMR 191
A +R +++
Sbjct: 293 -AIEQSVREIIK 303
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + + ++ DS I++YR H L G VL+EL GR TGC
Sbjct: 51 QEAVISAVAMIKKKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGC----------- 99
Query: 239 CAKGKGGSMHMY--AKNFYGGNGIVGAQT 265
+KGKGGSMH++ FYGG+GIVGAQ
Sbjct: 100 -SKGKGGSMHLFDIPNKFYGGHGIVGAQV 127
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 300 NKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
K K++ + ++ M +RR E G LY I GFCHLY GQ
Sbjct: 6 EKYKPIKEEYIKSFKDMLLLRRFEEKCGQLYGMGKIGGFCHLYIGQ 51
>sp|Q7XTJ3|ODPA3_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os04g0119400 PE=2
SV=2
Length = 425
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 21/190 (11%)
Query: 11 SPKNFYGGNGIVGAQVPLGTGIAFAAQYKGTG---------GVCFALYGDGASNQGQNFE 61
P N GG +G +P+ TG AFAA+Y+ V A +GDG N GQ FE
Sbjct: 175 EPHNLLGGFAFIGEGIPVATGAAFAAKYRHEVLKQSSPDGLDVTLAFFGDGTCNNGQFFE 234
Query: 62 AYNIAKLWGIPCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVRE 119
N+A+LW +P ++V ENN + +G S R+++ + Y +G +PG+ VDGMDVL VRE
Sbjct: 235 CLNMAQLWKLPIVFVVENNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVRE 294
Query: 120 ASKFAVNYASSGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKMLN 169
+K A+ A G+GP ++E TYR+ GHS++DP + RDPIT+ K+ ++
Sbjct: 295 VAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRRPDEKSHYAARDPITALKKYIIE 354
Query: 170 SELATVDELK 179
LAT ELK
Sbjct: 355 QNLATESELK 364
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + G ++ + D ++S YR H GV V++EL G+ TGC
Sbjct: 114 QEAVSTGFIKLLNQADCVVSTYRDHVHALSKGVPARSVMAELFGKATGC----------- 162
Query: 239 CAKGKGGSMHMYAK--NFYGGNGIVG 262
+G+GGSMHM+++ N GG +G
Sbjct: 163 -CRGQGGSMHMFSEPHNLLGGFAFIG 187
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 304 VTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
VT+++AL Y M R E +Y + GF HLY+GQ
Sbjct: 73 VTREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQ 114
>sp|P51267|ODPA_PORPU Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
purpurea GN=pdhA PE=3 SV=1
Length = 344
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 19/192 (9%)
Query: 8 INPSPKNFYGGNGIVGAQVPLGTGIAFAAQYK-------GTGGVCFALYGDGASNQGQNF 60
I +P NF GG + +P+ TG AF + Y+ G V +GDG +N GQ F
Sbjct: 118 IFSAPHNFLGGFAFIAEGIPVATGAAFQSIYRQQVLKEPGELRVTACFFGDGTTNNGQFF 177
Query: 61 EAYNIAKLWGIPCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVR 118
E N+A LW +P I+V ENN + +G + RSS+ + + + + +PGI VDGMDVLAVR
Sbjct: 178 ECLNMAVLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVR 237
Query: 119 EASKFAVNYASSGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKML 168
+ ++ AV A G+GP ++E +TYR+ GHS++DP RDPI K+ +L
Sbjct: 238 QVAEKAVERARQGQGPTLIEALTYRFRGHSLADPDELRSRQEKEAWVARDPIKKLKKHIL 297
Query: 169 NSELATVDELKE 180
++++A+ DEL +
Sbjct: 298 DNQIASSDELND 309
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + G+ ++ +D + S YR H GV V++EL G+ TGC
Sbjct: 60 QEAVSTGVIKLLDSKDYVCSTYRDHVHALSKGVPSQNVMAELFGKETGC----------- 108
Query: 239 CAKGKGGSMHMYA--KNFYGGNGIVG 262
++G+GGSMH+++ NF GG +
Sbjct: 109 -SRGRGGSMHIFSAPHNFLGGFAFIA 133
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 300 NKVTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
N++ +TK L+ Y M R E +Y + + GF HLY+GQ
Sbjct: 15 NQINLTKHKLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQ 60
>sp|Q1XDM0|ODPA_PORYE Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
yezoensis GN=pdhA PE=3 SV=1
Length = 346
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 112/191 (58%), Gaps = 23/191 (12%)
Query: 11 SPKNFYGGNGIVGAQVPLGTGIAFAAQY-----KGTGGV----CFALYGDGASNQGQNFE 61
+P NF GG + +P+ TG AF + Y K T + CF +GDG +N GQ FE
Sbjct: 123 APHNFLGGFAFIAEGIPVATGAAFQSIYRQQVLKETEDLRVTACF--FGDGTTNNGQFFE 180
Query: 62 AYNIAKLWGIPCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVRE 119
N+A LW +P I+V ENN + +G + RSS+ + + + + +PGI VDGMDVLAVR+
Sbjct: 181 CLNMAVLWKLPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQ 240
Query: 120 ASKFAVNYASSGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKMLN 169
A+K AV A G GP ++E +TYR+ GHS++DP RDPI K+ +L+
Sbjct: 241 AAKQAVQRARQGDGPTLIEALTYRFRGHSLADPDELRSRQEKEAWVARDPIKKLKKYILD 300
Query: 170 SELATVDELKE 180
+E+A + EL E
Sbjct: 301 NEIANIGELNE 311
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + G+ ++ D + S YR H GV V++EL G+ TGC
Sbjct: 62 QEAVSTGVIKLLNPTDYVCSTYRDHVHALSKGVPSKNVMAELFGKETGC----------- 110
Query: 239 CAKGKGGSMHMYA--KNFYGGNGIVG 262
+KG+GGSMH+++ NF GG +
Sbjct: 111 -SKGRGGSMHIFSAPHNFLGGFAFIA 135
>sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 ALPHA PE=1 SV=1
Length = 428
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 18/184 (9%)
Query: 14 NFYGGNGIVGAQVPLGTGIAFAAQYK------GTGGVCFALYGDGASNQGQNFEAYNIAK 67
N GG +G +P+ TG AF+++Y+ V A +GDG N GQ FE N+A
Sbjct: 184 NMLGGFAFIGEGIPVATGAAFSSKYRREVLKQDCDDVTVAFFGDGTCNNGQFFECLNMAA 243
Query: 68 LWGIPCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAV 125
L+ +P I+V ENN + +G S R+++ + + +G +PG+ VDGMDVL VRE +K AV
Sbjct: 244 LYKLPIIFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAV 303
Query: 126 NYASSGKGPLVLEVVTYRYSGHSMSDPGT----------SFRDPITSFKEKMLNSELATV 175
A G+GP ++E TYR+ GHS++DP + RDPI + K+ ++ ++LA
Sbjct: 304 TRARRGEGPTLVECETYRFRGHSLADPDELRDAAEKAKYAARDPIAALKKYLIENKLAKE 363
Query: 176 DELK 179
ELK
Sbjct: 364 AELK 367
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 14/86 (16%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA + G ++ + DS++S YR H GVS V+SEL G+ TGC
Sbjct: 120 QEAVSTGFIKLLTKSDSVVSTYRDHVHALSKGVSARAVMSELFGKVTGC----------- 168
Query: 239 CAKGKGGSMHMYAK--NFYGGNGIVG 262
+G+GGSMHM++K N GG +G
Sbjct: 169 -CRGQGGSMHMFSKEHNMLGGFAFIG 193
Score = 32.0 bits (71), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 302 VTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
+ +TK++ L Y M R E +Y + GF HLY+GQ
Sbjct: 77 LLITKEEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQ 120
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 90/174 (51%), Gaps = 13/174 (7%)
Query: 8 INPSPKNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAK 67
I K G NGIVG L G A A+YK T V +GDGA+NQG E N+A
Sbjct: 110 IADLDKGMLGANGIVGGGFTLACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAA 169
Query: 68 LWGIPCIYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAV 125
+W +P ++V ENNGYG T E +SA R +PG+ VDG D+LAV +A++ A+
Sbjct: 170 VWNLPVVFVAENNGYGEATPFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAI 229
Query: 126 NYASSGKGPLVLEVVTYRYSGHSMSDPGT-----------SFRDPITSFKEKML 168
A +G GP ++E +TYR GH D T +D I FK +L
Sbjct: 230 ERARNGGGPSLIECMTYRNYGHFEGDAQTYKTKDERVEHLEEKDAIQGFKNYLL 283
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 14/86 (16%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA AVG+ A + + DSI S +R HG G + G+++E+ G+ TG
Sbjct: 52 EEAVAVGVCAHLHDGDSITSTHRGHGHCIAKGCDLDGMMAEIFGKATGL----------- 100
Query: 239 CAKGKGGSMHM--YAKNFYGGNGIVG 262
KGKGGSMH+ K G NGIVG
Sbjct: 101 -CKGKGGSMHIADLDKGMLGANGIVG 125
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 302 VTVTKQDALLYYRQMQTIRRLETSAGNLYKEKVIRGFCHLYSGQ 345
+++T++ AL Y++M IR E L+ + V+ GF HLY+G+
Sbjct: 9 LSLTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGE 52
>sp|P27745|ACOA_CUPNH Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=acoA PE=1 SV=3
Length = 333
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 13 KNFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIP 72
K G NGI+GA PL G A AA+++G G V GDGASNQG E+ N+A +W +P
Sbjct: 118 KGMMGANGILGAGAPLICGAALAAKFRGKGEVGITFCGDGASNQGTFLESLNLAAVWNLP 177
Query: 73 CIYVCENNGYGMGTSAERSSASTDYYTR--GDYIPGIWVDGMDVLAVREASKFAVNYASS 130
I+V ENNGY TS + +A Y R G IPG+ VDG D AV EA+ + A
Sbjct: 178 VIFVIENNGYAESTSRDYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRARE 237
Query: 131 GKGPLVLEVVTYRYSGHSMSDPGT 154
G GP +LE R+ GH D T
Sbjct: 238 GGGPSLLECKMVRFYGHFEGDAQT 261
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 179 KEACAVGMRAVMREQDSIISAYRVHGWTYLMGVSVFGVLSELTGRRTGCAKGKGPISWEC 238
+EA VG+ + + D I S +R HG GV ++ E+ G++ G
Sbjct: 55 EEAAGVGILHHLNDGDRIASTHRGHGHCIAKGVDPVAMMKEIYGKKGG------------ 102
Query: 239 CAKGKGGSMHM--YAKNFYGGNGIVGA 263
GKGGSMH+ +K G NGI+GA
Sbjct: 103 SCNGKGGSMHIADLSKGMMGANGILGA 129
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+AFA + +G V GDG S+QG +E N A + P I+V +NN
Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNN 204
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
Y + T + +A+ + IPGI VDGMD LAV +A+K A + A +G+GP ++E
Sbjct: 205 NYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIE 264
Query: 139 VVTYRYSGHSMS-DPGTSFR-----------DPITSFKEKMLNSELATVD---ELKEACA 183
+TYRY H+M+ D T +R DP+ F++ + N L D E+ E
Sbjct: 265 TMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAK 324
Query: 184 VGMRAVMREQDS 195
++A ++E D+
Sbjct: 325 ADIKAAIKEADN 336
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+AFA + +G V GDG S+QG +E N A + P I+V +NN
Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNN 204
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
Y + T + +A+ + IPGI VDGMD LAV +A+K A + A +G+GP ++E
Sbjct: 205 NYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIE 264
Query: 139 VVTYRYSGHSMS-DPGTSFR-----------DPITSFKEKMLNSELATVD---ELKEACA 183
+TYRY H+M+ D T +R DP+ F++ + N L D E+ E
Sbjct: 265 TMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAK 324
Query: 184 VGMRAVMREQDS 195
++A ++E D+
Sbjct: 325 ADIKAAIKEADN 336
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+AFA + +G V GDG S+QG +E N A + P I+V +NN
Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNN 204
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
Y + T + +A+ + IPGI VDGMD LAV +A+K A + A +G+GP ++E
Sbjct: 205 NYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIE 264
Query: 139 VVTYRYSGHSMS-DPGTSFR-----------DPITSFKEKMLNSELATVD---ELKEACA 183
+TYRY H+M+ D T +R DP+ F++ + N L D E+ E
Sbjct: 265 TMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAK 324
Query: 184 VGMRAVMREQDS 195
++A ++E D+
Sbjct: 325 ADIKAAIKEADN 336
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+AFA + +G V GDG S+QG +E N A + P I+V +NN
Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNN 204
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
Y + T + +A+ + IPGI VDGMD LAV +A+K A + A +G+GP ++E
Sbjct: 205 NYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIE 264
Query: 139 VVTYRYSGHSMS-DPGTSFR-----------DPITSFKEKMLNSELATVD---ELKEACA 183
+TYRY H+M+ D T +R DP+ F++ + N L D E+ E
Sbjct: 265 TMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAK 324
Query: 184 VGMRAVMREQDS 195
++A ++E D+
Sbjct: 325 ADIKAAIKEADN 336
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+AFA + +G V GDG S+QG +E N A + P I+V +NN
Sbjct: 145 IIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNN 204
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
Y + T + +A+ + IPGI VDGMD LAV +A+K A + A +G+GP ++E
Sbjct: 205 NYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIE 264
Query: 139 VVTYRYSGHSMS-DPGTSFR-----------DPITSFKEKMLNSELATVD---ELKEACA 183
+TYRY H+M+ D T +R DP+ F++ + N L D E+ E
Sbjct: 265 TMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAK 324
Query: 184 VGMRAVMREQDS 195
++A ++E D+
Sbjct: 325 ADIKAAIKEADN 336
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 17/192 (8%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+AFA + +G V GDG S+QG +E N A + P I+V +NN
Sbjct: 145 IIGAQYIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNN 204
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
Y + T + +A+ + IPGI VDGMD LAV +A+K A + A +G+GP ++E
Sbjct: 205 NYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIE 264
Query: 139 VVTYRYSGHSMS-DPGTSFR-----------DPITSFKEKMLNSELATVD---ELKEACA 183
+TYRY H+M+ D T +R DP+ F++ + N L D E+ E
Sbjct: 265 TMTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKFLENKGLWNEDKENEVIERAK 324
Query: 184 VGMRAVMREQDS 195
++A ++E D+
Sbjct: 325 ADIKAAIKEADN 336
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+AF + +G V GDG S+QG +E N A + P I+V +NN
Sbjct: 145 IIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNN 204
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
Y + T + +A+ + IPGI VDGMD LAV +A+ A A +G+GP V+E
Sbjct: 205 NYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIE 264
Query: 139 VVTYRYSGHSMS-DPGTSFR-----------DPITSFKEKMLNSELATVD---ELKEACA 183
+TYRY H+M+ D T +R DP+ F++ + L D E+ E
Sbjct: 265 TLTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKYLEAKGLWNEDKENEVVERAK 324
Query: 184 VGMRAVMREQDS 195
++A ++E D+
Sbjct: 325 SEIKAAIKEADN 336
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+AF + +G V GDG S+QG +E N A + P I+V +NN
Sbjct: 145 IIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNN 204
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
Y + T + +A+ + IPGI VDGMD LAV +A+ A A +G+GP V+E
Sbjct: 205 NYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIE 264
Query: 139 VVTYRYSGHSMS-DPGTSFR-----------DPITSFKEKMLNSELATVD---ELKEACA 183
+TYRY H+M+ D T +R DP+ F++ + L D E+ E
Sbjct: 265 TLTYRYGPHTMAGDDPTRYRTSDEDAEWEKKDPLVRFRKYLEAKGLWNEDKENEVVERAK 324
Query: 184 VGMRAVMREQDS 195
++A ++E D+
Sbjct: 325 SEIKAAIKEADN 336
>sp|P21873|ODPA_GEOSE Pyruvate dehydrogenase E1 component subunit alpha OS=Geobacillus
stearothermophilus GN=pdhA PE=1 SV=2
Length = 369
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 21 IVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENN 80
I+GAQ G+A + +G V GDG ++QG +E N A + P I+V +NN
Sbjct: 144 IIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNN 203
Query: 81 GYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLE 138
+ + T E+ + + + IPGI VDGMD LAV A K A A +G+GP ++E
Sbjct: 204 RFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIE 263
Query: 139 VVTYRYSGHSMSDPGTSFRDPITSFKEKMLNSELATVDEL 178
+ +RY H+MS D T ++ K L +E A D L
Sbjct: 264 TLCFRYGPHTMSG------DDPTRYRSKELENEWAKKDPL 297
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 14 NFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPC 73
NF+ + + VP G A + + TG V +GDGA+++G + N A + G P
Sbjct: 138 NFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPA 197
Query: 74 IYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSG 131
++VCENN Y + + S + IPG VDGMDVLA K AV A G
Sbjct: 198 VFVCENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRG 257
Query: 132 KGPLVLEVVTYRYSGHSMSDPGTSFR-----------DPITSFK 164
+GP ++E+ YRY HS +D + +R DPI F+
Sbjct: 258 EGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFR 301
>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
cereus GN=pdhA PE=1 SV=3
Length = 371
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 31 GIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPCIYVCENNGYGMGTSAER 90
G+A + +G V GDG ++QG +E N A + P I+V +NN Y + T E+
Sbjct: 156 GVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAISTPVEK 215
Query: 91 SSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSGKGPLVLEVVTYRYSGHS 148
SA+ + I GI VDGMD LAV A+ FA A +G+GP ++E +T+RY H+
Sbjct: 216 QSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERAVNGEGPTLIETLTFRYGPHT 275
Query: 149 MS-DPGTSFR-----------DPITSFKEKMLNS-------ELATVDELKE 180
M+ D T +R DPI F+ + N E ++E KE
Sbjct: 276 MAGDDPTRYRTKDIENEWEQKDPIVRFRAFLENKGLWSQEVEEKVIEEAKE 326
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 14 NFYGGNGIVGAQVPLGTGIAFAAQYKGTGGVCFALYGDGASNQGQNFEAYNIAKLWGIPC 73
NF+ + + VP G A + + TG V +GDGA+++G + N A + G P
Sbjct: 138 NFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPA 197
Query: 74 IYVCENNGYGMGTSAERSSASTDYYTRGDY--IPGIWVDGMDVLAVREASKFAVNYASSG 131
+++ ENN Y + + S + IPG VDGMDVLA K AV A G
Sbjct: 198 VFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRG 257
Query: 132 KGPLVLEVVTYRYSGHSMSDPGTSFR-----------DPITSFK 164
+GP ++E+ YRY HS +D + +R DPI F+
Sbjct: 258 EGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFR 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,940,503
Number of Sequences: 539616
Number of extensions: 5885736
Number of successful extensions: 13489
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 12980
Number of HSP's gapped (non-prelim): 470
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)