BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14571
(123 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|350418159|ref|XP_003491764.1| PREDICTED: hypothetical protein LOC100744978 [Bombus impatiens]
Length = 474
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 3/70 (4%)
Query: 50 STDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEI 109
+T + P+ L P A ++ NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEI
Sbjct: 336 ATTTSGPVNCLTGGPMAGIA---GSFNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEI 392
Query: 110 ASVLQLNETQ 119
AS LQLNETQ
Sbjct: 393 ASALQLNETQ 402
>gi|328778404|ref|XP_001120278.2| PREDICTED: hypothetical protein LOC724422 [Apis mellifera]
Length = 509
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 56 PLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQL 115
P+ L P A ++ NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQL
Sbjct: 377 PVNCLTGGPMAGIA---GSFNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQL 433
Query: 116 NETQ 119
NETQ
Sbjct: 434 NETQ 437
>gi|340727752|ref|XP_003402200.1| PREDICTED: hypothetical protein LOC100643550 [Bombus terrestris]
Length = 477
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 56 PLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQL 115
P+ L P A ++ NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQL
Sbjct: 345 PVNCLTGGPMAGIA---GSFNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQL 401
Query: 116 NETQ 119
NETQ
Sbjct: 402 NETQ 405
>gi|380028371|ref|XP_003697877.1| PREDICTED: uncharacterized protein LOC100865518 [Apis florea]
Length = 501
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
Query: 56 PLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQL 115
P+ L P A ++ NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQL
Sbjct: 369 PVNCLTGGPMAGIA---GSFNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQL 425
Query: 116 NETQT 120
NETQ
Sbjct: 426 NETQV 430
>gi|307187176|gb|EFN72416.1| Homeotic protein labial [Camponotus floridanus]
Length = 164
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 52/70 (74%)
Query: 50 STDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEI 109
S+ Y + + + +L+ NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEI
Sbjct: 24 SSVYGSTASGTVNCIAGSLAGIAGSFNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEI 83
Query: 110 ASVLQLNETQ 119
AS LQLNETQ
Sbjct: 84 ASALQLNETQ 93
>gi|383849613|ref|XP_003700439.1| PREDICTED: uncharacterized protein LOC100877608 [Megachile
rotundata]
Length = 468
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 56 PLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQL 115
P++ L P ++ NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQL
Sbjct: 336 PVSCLTGGPLVGIA---GGFNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQL 392
Query: 116 NETQ 119
NETQ
Sbjct: 393 NETQ 396
>gi|345489495|ref|XP_001603839.2| PREDICTED: homeobox protein Hox-B1-like [Nasonia vitripennis]
Length = 189
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 43/46 (93%)
Query: 75 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 66 FNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 111
>gi|322799503|gb|EFZ20811.1| hypothetical protein SINV_07039 [Solenopsis invicta]
Length = 160
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/56 (76%), Positives = 47/56 (83%)
Query: 65 SAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+ +L+ NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 35 AGSLAGIAGNFNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 90
>gi|37777297|dbj|BAC99310.1| Hox 1 [Bombyx mori]
Length = 67
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/46 (93%), Positives = 44/46 (95%)
Query: 75 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
LNN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 2 LNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 47
>gi|195498962|ref|XP_002096747.1| GE25839 [Drosophila yakuba]
gi|194182848|gb|EDW96459.1| GE25839 [Drosophila yakuba]
Length = 631
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 504 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 548
>gi|242011848|ref|XP_002426656.1| predicted protein [Pediculus humanus corporis]
gi|212510820|gb|EEB13918.1| predicted protein [Pediculus humanus corporis]
Length = 359
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 58 TALKYPPSAALSQHQSLL---NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQ 114
T L P S+ + + L NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQ
Sbjct: 232 TMLTTPSSSCMPLNNPGLLCQNNTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQ 291
Query: 115 LNETQT 120
LNETQ
Sbjct: 292 LNETQV 297
>gi|37693039|gb|AAQ98855.1| homeodomain transcription factor labial [Drosophila buzzatii]
Length = 655
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 517 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 561
>gi|195152109|ref|XP_002016979.1| GL22053 [Drosophila persimilis]
gi|194112036|gb|EDW34079.1| GL22053 [Drosophila persimilis]
Length = 644
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 512 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 556
>gi|15054408|gb|AAK77944.1| labial [Drosophila hydei]
Length = 144
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 85 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 129
>gi|37693029|gb|AAQ98853.1| homeodomain transcription factor labial [Drosophila virilis]
Length = 181
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 122 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 166
>gi|270341325|gb|AAS07616.2| labial homeodomain protein 3 [Perionyx excavatus]
Length = 144
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 45/57 (78%), Gaps = 3/57 (5%)
Query: 63 PPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP HQS N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 40 PPDYGYMGHQS---NLGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQ 93
>gi|347972359|ref|XP_001688960.2| AGAP004649-PA [Anopheles gambiae str. PEST]
gi|333469402|gb|EDO63634.2| AGAP004649-PA [Anopheles gambiae str. PEST]
Length = 548
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 4/59 (6%)
Query: 66 AALSQHQS--LLNN--SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+A+S HQS ++NN +GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 410 SAVSPHQSSFMINNNSTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANALHLNETQV 468
>gi|390178663|ref|XP_003736701.1| lab, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859538|gb|EIM52774.1| lab, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 257
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 120 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 164
>gi|37693035|gb|AAQ98854.1| homeodomain transcription factor labial [Drosophila buzzatii]
Length = 183
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 124 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 168
>gi|157628|gb|AAA28610.1| polypeptide containing F90-2 homeo box, partial [Drosophila
melanogaster]
Length = 68
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 8 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 52
>gi|15054406|gb|AAK77943.1| labial [Drosophila mercatorum]
Length = 144
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 85 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 129
>gi|62547254|gb|AAX86470.1| labial [Drosophila repleta]
Length = 132
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 73 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 117
>gi|15054412|gb|AAK77942.1| labial [Drosophila repleta]
Length = 144
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 85 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 129
>gi|151935655|gb|ABS18809.1| Hox1 [Flaccisagitta enflata]
Length = 224
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 42/46 (91%)
Query: 75 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+NN+GRTNFT KQLTELEKEFHFNKYLTRARRIEIA LQLNETQ
Sbjct: 113 INNTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIAGALQLNETQV 158
>gi|336390933|dbj|BAK40158.1| Hox1 [Nipponacmea fuscoviridis]
Length = 240
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 46/57 (80%), Gaps = 3/57 (5%)
Query: 63 PPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PPS A Q NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 176 PPSTAAPQTGP---NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQ 229
>gi|7578842|gb|AAF64148.1|AF231103_1 labial protein [Tribolium castaneum]
gi|7578844|gb|AAF64149.1|AF231104_1 labial protein [Tribolium castaneum]
Length = 142
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/44 (93%), Positives = 42/44 (95%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 43 NTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 86
>gi|9652091|gb|AAF91398.1|AF269153_1 labial homeotic protein [Anopheles gambiae]
Length = 109
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 4/59 (6%)
Query: 66 AALSQHQS--LLNN--SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+A+S HQS ++NN +GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 39 SAVSPHQSSFMINNNSTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANALHLNETQV 97
>gi|270002810|gb|EEZ99257.1| labial [Tribolium castaneum]
Length = 354
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/44 (93%), Positives = 42/44 (95%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 255 NTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 298
>gi|167234833|ref|NP_001107762.1| labial [Tribolium castaneum]
gi|15450328|gb|AAK96034.1| homeodomain transcription factor Labial [Tribolium castaneum]
Length = 353
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/44 (93%), Positives = 42/44 (95%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 254 NTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 297
>gi|5739140|gb|AAD50360.1|AF104008_1 labial protein [Thermobia domestica]
Length = 80
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/44 (93%), Positives = 42/44 (95%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 29 NAGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 72
>gi|78523219|gb|ABB46347.1| labial [Sacculina carcini]
Length = 157
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 46/58 (79%)
Query: 63 PPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
P + S + LNN+GRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 31 PKTTEFSFGAAGLNNTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIATALALNETQV 88
>gi|121308829|dbj|BAF43721.1| transcription factor Hox1 [Metacrinus rotundus]
Length = 306
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
NN+GRTNFTNKQLTELEKEFHFNKYLTRARR+EIAS L LNETQ
Sbjct: 224 NNNGRTNFTNKQLTELEKEFHFNKYLTRARRVEIASQLGLNETQ 267
>gi|241756344|ref|XP_002406420.1| homeobox protein, putative [Ixodes scapularis]
gi|215506157|gb|EEC15651.1| homeobox protein, putative [Ixodes scapularis]
Length = 137
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 43/50 (86%)
Query: 71 HQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+Q N +GRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQ
Sbjct: 39 NQGGPNGTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIATALQLNETQV 88
>gi|357605492|gb|EHJ64645.1| hypothetical protein KGM_10843 [Danaus plexippus]
Length = 199
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/43 (93%), Positives = 41/43 (95%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 111 TGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 153
>gi|255755637|dbj|BAH96544.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 329
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 42/43 (97%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+GRTNFTNKQLTELEKEFHFNKYLTRARR+EIA++L LNETQ
Sbjct: 243 NNGRTNFTNKQLTELEKEFHFNKYLTRARRVEIAAMLGLNETQ 285
>gi|38016601|gb|AAR07634.1| transcription factor Hox1 [Ptychodera flava]
Length = 334
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 42/43 (97%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+GRTNFTNKQLTELEKEFHFNKYLTRARR+EIA++L LNETQ
Sbjct: 248 NNGRTNFTNKQLTELEKEFHFNKYLTRARRVEIAAMLGLNETQ 290
>gi|3445426|emb|CAA07497.1| homeobox protein [Cupiennius salei]
Length = 173
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N SGRTNFT KQLTELEKEFH+NKYLTRARRIEIA+ LQLNETQ
Sbjct: 67 NGSGRTNFTTKQLTELEKEFHYNKYLTRARRIEIATALQLNETQ 110
>gi|387625231|gb|AFJ94202.1| Hox1a homeobox protein [Pristina longiseta]
Length = 232
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/44 (86%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQ
Sbjct: 92 NGGRTNFTNKQLTELEKEFHFNRYLTRARRIEIAASLGLNETQV 135
>gi|48476647|gb|AAT44526.1| labial, partial [Oncopeltus fasciatus]
Length = 92
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/42 (95%), Positives = 40/42 (95%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 1 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 42
>gi|165873655|gb|ABY67952.1| labial hox protein [Capitella teleta]
Length = 296
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 212 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQV 255
>gi|27525469|emb|CAD59667.1| putative homeobox protein hox1 [Ciona intestinalis]
Length = 129
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 43/50 (86%)
Query: 71 HQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H + N+GRTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 12 HYGVTGNNGRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALRLNETQV 61
>gi|443689501|gb|ELT91875.1| hypothetical protein CAPTEDRAFT_219807 [Capitella teleta]
Length = 305
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 221 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAASLGLNETQV 264
>gi|3005950|emb|CAA76295.1| homeodomain protein [Lineus sanguineus]
Length = 118
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 12 NTGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQV 55
>gi|387598530|gb|AFJ91921.1| homeodomain transcription factor 1 [Platynereis dumerilii]
Length = 152
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 68 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQ 110
>gi|2765089|emb|CAA71835.1| Lox7 [Helobdella triserialis]
Length = 164
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/42 (92%), Positives = 39/42 (92%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
GRTNFTNKQLTELEKEFHFNKYLTRARRIEIAS L LNETQ
Sbjct: 44 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASTLGLNETQV 85
>gi|27528342|emb|CAD43607.1| homeobox protein [Platynereis dumerilii]
Length = 152
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 68 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQ 110
>gi|5916188|gb|AAD55932.1|AF163856_1 homeoprotein CH-Hox1 [Chaetopterus variopedatus]
Length = 302
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 216 NLGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQ 258
>gi|222876500|gb|ACM69147.1| Hox1 protein, partial [Isodiametra pulchra]
Length = 100
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
Query: 44 PH-PTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLT 102
PH S S P + YPP + GRTNFTNKQLTELEKEFHFN+YLT
Sbjct: 10 PHLQWSKSATAGLPGSTHAYPPGSQ--------TRGGRTNFTNKQLTELEKEFHFNRYLT 61
Query: 103 RARRIEIASVLQLNETQT 120
RARRIEIAS L LNETQ
Sbjct: 62 RARRIEIASSLNLNETQV 79
>gi|270341324|gb|AAS07615.2| labial homeodomain protein 2 [Perionyx excavatus]
Length = 342
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 70 QHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QH S N GRTNFTNKQLTELEKEFHFN+YLTRARRIEIAS L LNETQ
Sbjct: 182 QHHSTPN-LGRTNFTNKQLTELEKEFHFNRYLTRARRIEIASSLGLNETQV 231
>gi|170030886|ref|XP_001843318.1| homeobox protein [Culex quinquefasciatus]
gi|167868798|gb|EDS32181.1| homeobox protein [Culex quinquefasciatus]
Length = 160
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 41/43 (95%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQ
Sbjct: 59 TGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANTLQLNETQV 101
>gi|148231432|ref|NP_001084035.1| homeobox protein Hox-D1 [Xenopus laevis]
gi|214247|gb|AAA49745.1| homeobox gene; putative [Xenopus laevis]
Length = 322
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 7/91 (7%)
Query: 37 LSPL-GVHPHPTSPSTD-YTTPLTALKY---PPSAALSQHQSLLN--NSGRTNFTNKQLT 89
+SPL G +P P SP++D Y + +K PP ++ + + + RTNFT KQLT
Sbjct: 155 ISPLPGTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLT 214
Query: 90 ELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
ELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 215 ELEKEFHFNKYLTRARRIEIANSLQLNDTQV 245
>gi|326921909|ref|XP_003207196.1| PREDICTED: homeobox protein Hox-A1-like [Meleagris gallopavo]
Length = 212
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 57/94 (60%), Gaps = 10/94 (10%)
Query: 37 LSPL--GVHPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNK 86
LSPL G + SPS D + P + PP + + N+ RTNFT K
Sbjct: 57 LSPLHAGHQDNSRSPSADTSPPAQTFDWMKVKRNPPKTGKAGEYGFVGQPNTVRTNFTTK 116
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 117 QLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 150
>gi|385654472|gb|AFI61974.1| Hox-A1b [Anguilla japonica]
Length = 323
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 24 KKKRITKVQIPSELSPLGVHPHPT--SPSTDYTTPLTALKY------PPSAALSQHQSLL 75
++ ++ S LSPL V H T SP + T+P + PP +
Sbjct: 152 EQANLSFAACGSHLSPLHVTTHDTCCSPLPESTSPAQTFDWMKVKRNPPKTGKAGEYGFA 211
Query: 76 N--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 212 GQPNMVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 258
>gi|332692481|gb|AEE90162.1| Homeobox A1b [Anguilla anguilla]
Length = 323
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 24 KKKRITKVQIPSELSPLGVHPHPT--SPSTDYTTPLTALKY------PPSAALSQHQSLL 75
++ ++ S LSPL V H T SP + T+P + PP +
Sbjct: 152 EQANLSFAACGSHLSPLHVTTHDTCCSPLPESTSPAQTFDWMKVKRNPPKTGKAGEYGFA 211
Query: 76 N--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 212 GQPNMVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 258
>gi|259013352|ref|NP_001158384.1| homeobox 1 [Saccoglossus kowalevskii]
gi|32307799|gb|AAP79296.1| hox1 [Saccoglossus kowalevskii]
Length = 320
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 40/41 (97%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
GRTNFTNKQLTELEKEFHFNKYLTRARR+EIA++L LNETQ
Sbjct: 235 GRTNFTNKQLTELEKEFHFNKYLTRARRVEIAAMLGLNETQ 275
>gi|405967557|gb|EKC32705.1| Homeobox protein Hox-A1 [Crassostrea gigas]
Length = 117
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 26 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQV 69
>gi|405109796|emb|CCH51000.1| labial, partial [Phalangium opilio]
Length = 181
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
SGRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQ
Sbjct: 78 GSGRTNFTTKQLTELEKEFHFNKYLTRARRIEIATALQLNETQV 121
>gi|363730018|ref|XP_003640745.1| PREDICTED: homeobox protein Hox-A1 [Gallus gallus]
Length = 320
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 51/81 (62%), Gaps = 8/81 (9%)
Query: 48 SPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNK 99
SPS D + P + PP + + N+ RTNFT KQLTELEKEFHFNK
Sbjct: 178 SPSADTSPPAQTFDWMKVKRNPPKTGKAGEYGFVGQPNTVRTNFTTKQLTELEKEFHFNK 237
Query: 100 YLTRARRIEIASVLQLNETQT 120
YLTRARR+EIA+ LQLNETQ
Sbjct: 238 YLTRARRVEIAASLQLNETQV 258
>gi|63103214|gb|AAD46166.2|AF151663_1 labial homeobox protein [Alitta virens]
Length = 97
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 13 NMGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQ 55
>gi|396599|emb|CAA43980.1| Xhox.lab1 [Xenopus laevis]
Length = 272
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 41 GVHPHPTSPSTD-YTTPLTALKY---PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKE 94
G +P P SP++D Y + +K PP ++ + + + RTNFT KQLTELEKE
Sbjct: 85 GTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLTELEKE 144
Query: 95 FHFNKYLTRARRIEIASVLQLNETQT 120
FHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 145 FHFNKYLTRARRIEIANSLQLNDTQV 170
>gi|195954553|gb|ACG58969.1| labial hox protein [Archegozetes longisetosus]
Length = 139
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
Query: 64 PSAALSQHQSL---LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
P L Q L L N+GRTNFT QLTELEKEFHFNKYLTRARRIEIA+ LQLNETQ
Sbjct: 79 PIVLLQQALQLVWQLPNTGRTNFTTNQLTELEKEFHFNKYLTRARRIEIATALQLNETQV 138
>gi|6015509|emb|CAB57787.1| labial protein [Drosophila melanogaster]
Length = 629
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 545
>gi|26006977|sp|P10105.2|LAB_DROME RecName: Full=Homeotic protein labial; AltName: Full=F24; AltName:
Full=F90-2
Length = 635
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 511 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 551
>gi|6015508|emb|CAB57786.1| labial protein [Drosophila melanogaster]
Length = 635
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 511 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 551
>gi|17136284|ref|NP_476613.1| labial, isoform A [Drosophila melanogaster]
gi|4389441|gb|AAD19811.1| homeodomain protein [Drosophila melanogaster]
gi|7298892|gb|AAF54098.1| labial, isoform A [Drosophila melanogaster]
gi|20152115|gb|AAM11417.1| RE63854p [Drosophila melanogaster]
gi|220942552|gb|ACL83819.1| lab-PA [synthetic construct]
gi|220960292|gb|ACL92682.1| lab-PA [synthetic construct]
Length = 629
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 505 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 545
>gi|255661294|gb|ACU25803.1| homeobox protein A1b [Anguilla japonica]
Length = 226
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 24 KKKRITKVQIPSELSPLGVHPHPT--SPSTDYTTPLTALKY------PPSAALSQHQSLL 75
++ ++ S LSPL V H T SP + T+P + PP +
Sbjct: 119 EQANLSFAACGSHLSPLHVTTHDTCCSPLPESTSPAQTFDWMKVKRNPPKTGKAGEYGFA 178
Query: 76 N--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 179 GQPNMVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQ 224
>gi|193083003|ref|NP_001122333.1| homeobox transcription factor Hox1 [Ciona intestinalis]
gi|70569882|dbj|BAE06495.1| transcription factor protein [Ciona intestinalis]
Length = 365
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 42/47 (89%)
Query: 73 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
+ N+GRTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 231 GVTGNNGRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALRLNETQ 277
>gi|46277831|gb|AAK77946.2| homeodomain transcription factor labial [Drosophila virilis]
Length = 563
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/47 (89%), Positives = 44/47 (93%)
Query: 73 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 501 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 547
>gi|212276503|sp|Q08820.3|HXD1_XENLA RecName: Full=Homeobox protein Hox-D1; AltName: Full=Hox.lab1;
AltName: Full=Labial protein; Short=Xlab
gi|76780340|gb|AAI06403.1| HoxD1 protein [Xenopus laevis]
Length = 300
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 41 GVHPHPTSPSTD-YTTPLTALKY---PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKE 94
G +P P SP++D Y + +K PP ++ + + + RTNFT KQLTELEKE
Sbjct: 159 GTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLTELEKE 218
Query: 95 FHFNKYLTRARRIEIASVLQLNETQT 120
FHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 219 FHFNKYLTRARRIEIANSLQLNDTQV 244
>gi|194899107|ref|XP_001979104.1| GG10324 [Drosophila erecta]
gi|190650807|gb|EDV48062.1| GG10324 [Drosophila erecta]
Length = 632
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 508 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 548
>gi|829180|emb|CAA31495.1| F24 protein (long form) (AA 141-629) [Drosophila melanogaster]
Length = 495
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 371 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 411
>gi|413876|gb|AAA03480.1| homeobox protein [Xenopus laevis]
Length = 300
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 41 GVHPHPTSPSTD-YTTPLTALKY---PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKE 94
G +P P SP++D Y + +K PP ++ + + + RTNFT KQLTELEKE
Sbjct: 159 GTYPKPASPASDSYVSTFDWMKVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLTELEKE 218
Query: 95 FHFNKYLTRARRIEIASVLQLNETQT 120
FHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 219 FHFNKYLTRARRIEIANSLQLNDTQV 244
>gi|387625233|gb|AFJ94203.1| Hox1b homeobox protein, partial [Pristina longiseta]
Length = 206
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/44 (86%), Positives = 40/44 (90%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQ
Sbjct: 162 NQLGRTNFTNKQLTELEKEFHFNRYLTRARRIEIAASLGLNETQ 205
>gi|449268329|gb|EMC79198.1| Homeobox protein Hox-A1, partial [Columba livia]
Length = 250
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 52/81 (64%), Gaps = 8/81 (9%)
Query: 48 SPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNK 99
SPST+ + P + PP + + N+ RTNFT KQLTELEKEFHFNK
Sbjct: 108 SPSTETSPPAQTFDWMKVKRNPPKTGKAGEYGFVGQPNTVRTNFTTKQLTELEKEFHFNK 167
Query: 100 YLTRARRIEIASVLQLNETQT 120
YLTRARR+EIA+ LQLNETQ
Sbjct: 168 YLTRARRVEIAASLQLNETQV 188
>gi|56118550|ref|NP_001008017.1| homeobox A1 [Xenopus (Silurana) tropicalis]
gi|51895944|gb|AAH80895.1| homeobox A1 [Xenopus (Silurana) tropicalis]
Length = 323
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 218 NTARTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 261
>gi|160420265|ref|NP_001079188.1| homeobox A1 [Xenopus laevis]
gi|27924329|gb|AAH44984.1| Hoxa1-A protein [Xenopus laevis]
Length = 324
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 219 NTARTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 262
>gi|2495318|sp|Q08821.1|HXA1_XENLA RecName: Full=Homeobox protein Hox-A1; AltName: Full=Hox.lab2
gi|396601|emb|CAA43981.1| Xhox.lab2 [Xenopus laevis]
gi|413874|gb|AAA03479.1| homeobox protein, partial [Xenopus laevis]
Length = 240
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 135 NTARTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 178
>gi|157109067|ref|XP_001650511.1| homeobox protein [Aedes aegypti]
gi|108879163|gb|EAT43388.1| AAEL005195-PA [Aedes aegypti]
Length = 159
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 40/43 (93%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 59 TGRTNFTNKQLTELEKEFHFNKYLTRARRIEIANSLHLNETQV 101
>gi|62859877|ref|NP_001016678.1| homeobox protein Hox-D1 [Xenopus (Silurana) tropicalis]
gi|123907399|sp|Q28IU6.1|HXD1_XENTR RecName: Full=Homeobox protein Hox-D1
gi|89268715|emb|CAJ83247.1| homeo box D1 [Xenopus (Silurana) tropicalis]
gi|169642308|gb|AAI60395.1| homeobox D1 [Xenopus (Silurana) tropicalis]
gi|213627234|gb|AAI70961.1| homeobox D1 [Xenopus (Silurana) tropicalis]
gi|213627236|gb|AAI70965.1| homeobox D1 [Xenopus (Silurana) tropicalis]
Length = 301
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 10/88 (11%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNKQLTELE 92
G +P P SP++D T ++ + PP +L + + + RTNFT KQLTELE
Sbjct: 162 GTYPKPASPASD--THVSTFDWMKVKRNPPKKSLQSEYGVASPPCTVRTNFTTKQLTELE 219
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 220 KEFHFNKYLTRARRIEIANSLQLNDTQV 247
>gi|213514772|ref|NP_001133035.1| homeobox protein HoxA1aa [Salmo salar]
gi|157816051|gb|ABV82044.1| homeobox protein HoxA1aa [Salmo salar]
gi|158702230|gb|ABW77446.1| homeobox protein HoxA1aa [Salmo salar]
Length = 328
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 41/45 (91%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 217 SNTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 261
>gi|251857547|gb|ACT22569.1| anterior Hox1 [Convolutriloba retrogemma]
Length = 302
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 39/42 (92%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQ
Sbjct: 239 GGRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQ 280
>gi|195344035|ref|XP_002038596.1| GM10536 [Drosophila sechellia]
gi|194133617|gb|EDW55133.1| GM10536 [Drosophila sechellia]
Length = 304
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 176 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 216
>gi|47229434|emb|CAF99422.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 213 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 256
>gi|217035824|gb|ACJ74382.1| Hox1 [Branchiostoma lanceolatum]
Length = 288
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQ
Sbjct: 206 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQ 248
>gi|115722908|ref|XP_781966.2| PREDICTED: uncharacterized protein LOC576580 [Strongylocentrotus
purpuratus]
Length = 397
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/44 (90%), Positives = 43/44 (97%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
NN+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA++L LNETQ
Sbjct: 250 NNNGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAMLGLNETQ 293
>gi|348522799|ref|XP_003448911.1| PREDICTED: homeobox protein Hox-A1a-like [Oreochromis niloticus]
Length = 299
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 44 PHPTSPSTDYTTPLTALKYPPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYL 101
P+P S + D+ + + PP S N+ RTNFT KQLTELEKEFHFNKYL
Sbjct: 157 PYPGSQTFDW---MKVKRNPPKTGRSGEYGYAGQPNTVRTNFTTKQLTELEKEFHFNKYL 213
Query: 102 TRARRIEIASVLQLNETQT 120
TRARR+EIA+ LQLNETQ
Sbjct: 214 TRARRVEIAAALQLNETQV 232
>gi|260835445|ref|XP_002612719.1| hypothetical protein BRAFLDRAFT_116926 [Branchiostoma floridae]
gi|83423508|dbj|BAA78620.2| AmphiHox1 [Branchiostoma floridae]
gi|229298098|gb|EEN68728.1| hypothetical protein BRAFLDRAFT_116926 [Branchiostoma floridae]
Length = 288
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQ
Sbjct: 206 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQ 248
>gi|449277041|gb|EMC85348.1| Homeobox protein Hox-B1, partial [Columba livia]
Length = 166
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
Query: 46 PTSPSTDYTTPLTALKY---PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKY 100
P+ P + T +K PP A LL N+ RTNFT KQLTELEKEFHFNKY
Sbjct: 35 PSEPGPNATQTFDWMKVKRNPPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKY 94
Query: 101 LTRARRIEIASVLQLNETQT 120
LTRARR+EIA+ L+LNETQ
Sbjct: 95 LTRARRVEIAATLELNETQV 114
>gi|195038455|ref|XP_001990673.1| GH19490 [Drosophila grimshawi]
gi|193894869|gb|EDV93735.1| GH19490 [Drosophila grimshawi]
Length = 651
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/47 (89%), Positives = 44/47 (93%)
Query: 73 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 515 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 561
>gi|154183826|gb|ABS70766.1| Hoxa1a [Haplochromis burtoni]
Length = 325
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 215 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 258
>gi|397911054|gb|AFO68803.1| homeodomain-containing protein Hox1, partial [Branchiostoma
lanceolatum]
Length = 275
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQ
Sbjct: 199 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQ 241
>gi|284005051|ref|NP_001164868.1| homeobox protein Hox-A1 [Oryctolagus cuniculus]
gi|217418304|gb|ACK44306.1| homeobox A1 isoform a (predicted) [Oryctolagus cuniculus]
Length = 337
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/44 (86%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NS RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 232 NSVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 275
>gi|195568783|ref|XP_002102393.1| GD19533 [Drosophila simulans]
gi|194198320|gb|EDX11896.1| GD19533 [Drosophila simulans]
Length = 189
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/40 (92%), Positives = 39/40 (97%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 61 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 100
>gi|222876506|gb|ACM69150.1| Hox1 protein [Symsagittifera roscoffensis]
Length = 420
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 39/42 (92%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQ
Sbjct: 357 GGRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQ 398
>gi|432881689|ref|XP_004073903.1| PREDICTED: homeobox protein Hox-A1a-like [Oryzias latipes]
gi|74267501|dbj|BAE44249.1| hoxA1a [Oryzias latipes]
gi|83016933|dbj|BAE53465.1| hoxA1a [Oryzias latipes]
Length = 323
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 214 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 257
>gi|258678265|gb|ACV87739.1| anterior class Hox protein [Convolutriloba longifissura]
Length = 166
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 39/43 (90%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQ
Sbjct: 103 GGRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQV 145
>gi|397911056|gb|AFO68804.1| homeodomain-containing protein Hox1, partial [Branchiostoma
lanceolatum]
Length = 178
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQ
Sbjct: 96 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQ 138
>gi|410911096|ref|XP_003969026.1| PREDICTED: homeobox protein Hox-A1a-like [Takifugu rubripes]
Length = 293
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 181 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 224
>gi|119370769|sp|Q1KL10.1|HXA1A_FUGRU RecName: Full=Homeobox protein Hox-A1a
gi|94482764|gb|ABF22384.1| homeobox protein HoxA1a [Takifugu rubripes]
Length = 325
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 213 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 256
>gi|195446461|ref|XP_002070791.1| GK10836 [Drosophila willistoni]
gi|194166876|gb|EDW81777.1| GK10836 [Drosophila willistoni]
Length = 668
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/44 (93%), Positives = 43/44 (97%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 535 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 578
>gi|444723477|gb|ELW64132.1| Homeobox protein Hox-D1 [Tupaia chinensis]
Length = 201
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
G +P SP++ + ++ P + L+++ S +S RTNF+ KQLTELE
Sbjct: 59 GAYPKSVSPASGLPAAFSTFEWMKVKRNAPKKSKLTEYGSASPSSAIRTNFSTKQLTELE 118
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 119 KEFHFNKYLTRARRIEIANCLQLNDTQV 146
>gi|305379189|gb|ADM48793.1| homeobox transcription factor 1 [Symsagittifera roscoffensis]
Length = 95
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 39/43 (90%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQ
Sbjct: 32 GGRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQV 74
>gi|345323628|ref|XP_001510442.2| PREDICTED: homeobox protein Hox-A1-like [Ornithorhynchus anatinus]
Length = 202
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 97 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 140
>gi|327280452|ref|XP_003224966.1| PREDICTED: homeobox protein Hox-A1-like [Anolis carolinensis]
Length = 331
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 226 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 269
>gi|123204391|gb|ABM73542.1| homeodomain protein [Megalobrama amblycephala]
Length = 310
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 226 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 269
>gi|88604702|gb|ABD46722.1| homeobox protein labial [Endeis spinosa]
Length = 271
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 39/46 (84%)
Query: 75 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
LNN+GRT F KQLTELEKEFHFNKYLTRAR IEIAS L LNETQ
Sbjct: 199 LNNTGRTAFNTKQLTELEKEFHFNKYLTRARXIEIASALSLNETQV 244
>gi|326454536|gb|ADZ74203.1| homeodomain protein HoxA1a [Hypophthalmichthys molitrix]
Length = 286
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 37 LSPLGV--HPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNK 86
LSPL V H SP +D + + PP + N+ RTNFT K
Sbjct: 157 LSPLHVAHHDACCSPLSDGVSTGQTFDWMKVKRNPPKTGKAGEYGFGGQPNTVRTNFTTK 216
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 217 QLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 250
>gi|326454546|gb|ADZ74208.1| homeodomain protein HoxA1a [Ochetobius elongatus]
Length = 286
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 37 LSPLGV--HPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNK 86
LSPL V H SP +D + + PP + N+ RTNFT K
Sbjct: 157 LSPLHVAHHDACCSPLSDGVSTGQTFDWMKVKRNPPKTGKAGEYGFGGQPNTVRTNFTTK 216
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 217 QLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 250
>gi|400180330|gb|AFP73298.1| Hoxa1alpha [Polyodon spathula]
Length = 315
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 211 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQ 253
>gi|400180343|gb|AFP73310.1| Hoxa1beta [Polyodon spathula]
Length = 317
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 212 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQ 254
>gi|326454544|gb|ADZ74207.1| homeodomain protein HoxA1a [Opsariichthys bidens]
Length = 286
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 37 LSPLGV--HPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNK 86
LSPL V H SP +D + + PP + N+ RTNFT K
Sbjct: 157 LSPLHVAHHDACCSPLSDGVSTGQTFDWMKVKRNPPKTGKAGEYGFGGQPNTVRTNFTTK 216
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 217 QLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 250
>gi|354479667|ref|XP_003502031.1| PREDICTED: homeobox protein Hox-A1-like [Cricetulus griseus]
gi|344252745|gb|EGW08849.1| Homeobox protein Hox-A1 [Cricetulus griseus]
Length = 334
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 272
>gi|326454540|gb|ADZ74205.1| homeodomain protein HoxA1a [Squaliobarbus curriculus]
Length = 286
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 37 LSPLGV--HPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNK 86
LSPL V H SP +D + + PP + N+ RTNFT K
Sbjct: 157 LSPLHVAHHDACCSPLSDGVSTGQTFDWMKVKRNPPKTGKAGEYGFGGQPNTVRTNFTTK 216
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 217 QLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 250
>gi|326454534|gb|ADZ74202.1| homeodomain protein HoxA1a [Ctenopharyngodon idella]
Length = 286
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 37 LSPLGV--HPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNK 86
LSPL V H SP +D + + PP + N+ RTNFT K
Sbjct: 157 LSPLHVTHHDACCSPLSDGVSTGQTFDWMKVKRNPPKTGKAGEYGFGGQPNTVRTNFTTK 216
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 217 QLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 250
>gi|5596508|gb|AAD45587.1|AF144672_1 labial homeodomain protein [Lingula anatina]
Length = 89
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N GRTNF++KQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 17 NMGRTNFSDKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQV 60
>gi|261498715|gb|ACX84671.1| homeobox protein 1 [Gibbula varia]
Length = 316
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
KYP ++ +N++GRTNF NKQ E EKEFHFNKY TRARRIEIA+ L LNETQ
Sbjct: 40 KYPCPGGDFKYAGGINSTGRTNFWNKQAFEFEKEFHFNKYFTRARRIEIAAALGLNETQV 99
>gi|395830935|ref|XP_003788568.1| PREDICTED: homeobox protein Hox-A1 [Otolemur garnettii]
gi|202070723|gb|ACH95311.1| homeobox A1 isoform a (predicted) [Otolemur garnettii]
Length = 335
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|222530734|emb|CAU83355.1| labial [Parasteatoda tepidariorum]
Length = 248
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 39/43 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
+GRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 205 GTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIATALHLNETQ 247
>gi|14916591|sp|Q9IA19.1|HXA1_HETFR RecName: Full=Homeobox protein Hox-A1
gi|7271828|gb|AAF44639.1|AF224262_1 HoxA1 [Heterodontus francisci]
Length = 326
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 222 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQ 264
>gi|198453512|ref|XP_002137686.1| lab, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132389|gb|EDY68244.1| lab, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 691
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/44 (93%), Positives = 43/44 (97%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 554 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 597
>gi|444713452|gb|ELW54351.1| Homeobox protein Hox-A1 [Tupaia chinensis]
Length = 344
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 239 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 282
>gi|326454532|gb|ADZ74201.1| homeodomain protein HoxA1a [Mylopharyngodon piceus]
Length = 286
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 207 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 250
>gi|386765232|ref|NP_001246953.1| labial, isoform B [Drosophila melanogaster]
gi|383292533|gb|AFH06272.1| labial, isoform B [Drosophila melanogaster]
Length = 213
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 89 RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQV 129
>gi|195389737|ref|XP_002053531.1| lab [Drosophila virilis]
gi|194151617|gb|EDW67051.1| lab [Drosophila virilis]
Length = 643
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/47 (89%), Positives = 44/47 (93%)
Query: 73 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 506 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 552
>gi|359754083|gb|AEV59506.1| HOXA1 [Macropus eugenii]
Length = 337
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 22 KKKKKRITKVQIPSELSPLGVHPHPT--SPSTDYTTPLTALKY------PPSAALSQHQS 73
++ + +T + LSPL T SPS + + P + PP +
Sbjct: 166 GQEAQNLTLANYNNSLSPLHASHQETCRSPSAEASPPTQTFDWMKVKRNPPKTGKAGEYG 225
Query: 74 LLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+ N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 226 YIGQPNTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 274
>gi|351704291|gb|EHB07210.1| Homeobox protein Hox-A1 [Heterocephalus glaber]
Length = 333
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 271
>gi|126341827|ref|XP_001363080.1| PREDICTED: homeobox protein Hox-A1-like [Monodelphis domestica]
Length = 337
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 22 KKKKKRITKVQIPSELSPLGVHPHPT--SPSTDYTTPLTALKY------PPSAALSQHQS 73
++ + +T + LSPL T SPS + + P + PP +
Sbjct: 166 GQEAQNLTLANYNNSLSPLHASHQETCRSPSAETSPPAQTFDWMKVKRNPPKTGKAGEYG 225
Query: 74 LLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+ N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 226 YIGQPNTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 274
>gi|184185532|gb|ACC68933.1| homeobox A1 isoform a (predicted) [Rhinolophus ferrumequinum]
Length = 334
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 272
>gi|255742439|gb|ACU32554.1| homeobox protein HoxA1 [Callorhinchus milii]
Length = 326
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 221 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQ 263
>gi|32394402|gb|AAN11404.1| labial-like homeobox protein SrHox1 [Symsagittifera roscoffensis]
Length = 68
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 39/43 (90%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ L LNETQ
Sbjct: 5 GGRTNFTNKQLTELEKEFHFNRYLTRARRIEIATSLTLNETQV 47
>gi|220898173|gb|ACL81429.1| HoxA1 [Latimeria menadoensis]
Length = 327
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 223 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQ 265
>gi|28629657|gb|AAO43034.1| HoxC1 [Latimeria menadoensis]
Length = 110
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 39/42 (92%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
+ RTNFT KQLTELEKEFHFNKYLTRARR+EIAS LQLNETQ
Sbjct: 12 TARTNFTTKQLTELEKEFHFNKYLTRARRVEIASALQLNETQ 53
>gi|392356107|ref|XP_003752224.1| PREDICTED: homeobox protein Hox-A1-like [Rattus norvegicus]
gi|149033367|gb|EDL88168.1| homeo box A1 [Rattus norvegicus]
Length = 334
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 272
>gi|73976148|ref|XP_539484.2| PREDICTED: homeobox protein Hox-A1 isoform 1 [Canis lupus
familiaris]
Length = 333
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 271
>gi|220898199|gb|ACL81453.1| HoxC1 [Latimeria menadoensis]
Length = 302
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/40 (92%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT KQLTELEKEFHFNKYLTRARR+EIAS LQLNETQ
Sbjct: 206 RTNFTTKQLTELEKEFHFNKYLTRARRVEIASALQLNETQ 245
>gi|311275750|ref|XP_003134892.1| PREDICTED: homeobox protein Hox-A1-like [Sus scrofa]
Length = 336
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 231 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 274
>gi|281182377|ref|NP_001162534.1| homeobox protein Hox-A1 [Papio anubis]
gi|160904215|gb|ABX52199.1| homeobox A1, isoform 1 (predicted) [Papio anubis]
Length = 335
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|410952516|ref|XP_003982925.1| PREDICTED: homeobox protein Hox-A1 [Felis catus]
Length = 335
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|55628252|ref|XP_519009.1| PREDICTED: homeobox protein Hox-A1 [Pan troglodytes]
gi|410222852|gb|JAA08645.1| homeobox A1 [Pan troglodytes]
Length = 335
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|301754125|ref|XP_002912903.1| PREDICTED: homeobox protein Hox-A1-like [Ailuropoda melanoleuca]
gi|281349544|gb|EFB25128.1| hypothetical protein PANDA_000664 [Ailuropoda melanoleuca]
Length = 332
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 227 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 270
>gi|195107210|ref|XP_001998208.1| GI23760 [Drosophila mojavensis]
gi|193914802|gb|EDW13669.1| GI23760 [Drosophila mojavensis]
Length = 651
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/47 (89%), Positives = 44/47 (93%)
Query: 73 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 508 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 554
>gi|390466612|ref|XP_002807080.2| PREDICTED: homeobox protein Hox-A1 [Callithrix jacchus]
gi|167427224|gb|ABZ80205.1| homeobox A1 isoform a (predicted) [Callithrix jacchus]
Length = 326
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 272
>gi|354472309|ref|XP_003498382.1| PREDICTED: homeobox protein Hox-D1-like, partial [Cricetulus
griseus]
Length = 140
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 8/85 (9%)
Query: 44 PHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEF 95
P P SP++ + ++ P + LS++ + +S RTNF+ KQLTELEKEF
Sbjct: 1 PTPASPTSGLPAAFSTFEWMKVKRNAPRKSKLSEYGAASPSSAIRTNFSTKQLTELEKEF 60
Query: 96 HFNKYLTRARRIEIASVLQLNETQT 120
HFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 61 HFNKYLTRARRIEIANCLQLNDTQV 85
>gi|123353|sp|P09022.2|HXA1_MOUSE RecName: Full=Homeobox protein Hox-A1; AltName: Full=Early retinoic
acid 1; AltName: Full=Homeobox protein Hox-1.6; AltName:
Full=Homeoboxless protein ERA-1-399; AltName:
Full=Homeotic protein ERA-1-993
gi|309218|gb|AAA37559.1| ERA-1-993 protein [Mus musculus]
Length = 331
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 226 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 269
>gi|440899272|gb|ELR50601.1| Homeobox protein Hox-A1 [Bos grunniens mutus]
Length = 333
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 271
>gi|329663517|ref|NP_001193040.1| homeobox protein Hox-A1 [Bos taurus]
gi|296488419|tpg|DAA30532.1| TPA: homeobox A1-like [Bos taurus]
Length = 333
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 271
>gi|1051228|gb|AAC50249.1| 36 kDa homeodomain-containing protein encoded by the middle size
HOXA1 transcript [Homo sapiens]
gi|8176754|gb|AAB35423.2| HOXA1 [Homo sapiens]
Length = 330
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 225 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 268
>gi|223459868|gb|AAI38099.1| Homeo box A1 [Mus musculus]
Length = 337
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 232 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 275
>gi|149706057|ref|XP_001499346.1| PREDICTED: homeobox protein Hox-A1-like [Equus caballus]
Length = 336
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 231 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 274
>gi|160358776|ref|NP_034579.3| homeobox protein Hox-A1 [Mus musculus]
gi|148666231|gb|EDK98647.1| homeobox A1 [Mus musculus]
gi|223460258|gb|AAI38098.1| Homeo box A1 [Mus musculus]
Length = 336
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 231 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 274
>gi|403287987|ref|XP_003935199.1| PREDICTED: homeobox protein Hox-A1 [Saimiri boliviensis
boliviensis]
Length = 333
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 271
>gi|254212181|gb|ACT65756.1| Hoxa1 [Leucoraja erinacea]
Length = 325
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 221 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 264
>gi|397472871|ref|XP_003807957.1| PREDICTED: homeobox protein Hox-A1 [Pan paniscus]
Length = 336
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 231 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 274
>gi|426355736|ref|XP_004045264.1| PREDICTED: homeobox protein Hox-A1 [Gorilla gorilla gorilla]
Length = 335
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|344270558|ref|XP_003407111.1| PREDICTED: homeobox protein Hox-A1-like [Loxodonta africana]
Length = 333
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 271
>gi|170649674|gb|ACB21259.1| homeobox A1 isoform a (predicted) [Callicebus moloch]
Length = 335
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|11967757|emb|CAC19382.1| Hox1/lab protein [Discocelis tigrina]
Length = 86
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+GRTNFTNKQLTELEKEF+FNKYLTRARRIEIA+ L LNETQ
Sbjct: 5 GNGRTNFTNKQLTELEKEFYFNKYLTRARRIEIANALGLNETQV 48
>gi|41350071|gb|AAS00374.1| unknown [Homo sapiens]
gi|189069262|dbj|BAG36294.1| unnamed protein product [Homo sapiens]
Length = 335
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|5031761|ref|NP_005513.1| homeobox protein Hox-A1 isoform a [Homo sapiens]
gi|6166216|sp|P49639.2|HXA1_HUMAN RecName: Full=Homeobox protein Hox-A1; AltName: Full=Homeobox
protein Hox-1F
gi|500757|gb|AAA86954.1| HOX A1 homeodomain protein [Homo sapiens]
gi|21595839|gb|AAH32547.1| Homeobox A1 [Homo sapiens]
gi|51094984|gb|EAL24228.1| homeo box A1 [Homo sapiens]
gi|61364253|gb|AAX42514.1| homeobox A1 [synthetic construct]
gi|61364262|gb|AAX42515.1| homeobox A1 [synthetic construct]
gi|119614267|gb|EAW93861.1| homeobox A1, isoform CRA_a [Homo sapiens]
gi|123979962|gb|ABM81810.1| homeobox A1 [synthetic construct]
gi|123994725|gb|ABM84964.1| homeobox A1 [synthetic construct]
gi|208968487|dbj|BAG74082.1| homeobox A1 [synthetic construct]
Length = 335
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|61364267|gb|AAX42516.1| homeobox A1 [synthetic construct]
Length = 335
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|355747758|gb|EHH52255.1| Homeobox protein Hox-1F [Macaca fascicularis]
Length = 335
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|395738643|ref|XP_002818169.2| PREDICTED: homeobox protein Hox-A1 [Pongo abelii]
Length = 263
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 158 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 201
>gi|109067091|ref|XP_001093148.1| PREDICTED: homeobox protein Hox-A1-like [Macaca mulatta]
gi|355560741|gb|EHH17427.1| Homeobox protein Hox-1F [Macaca mulatta]
Length = 335
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|60654527|gb|AAX29954.1| homeobox A1 [synthetic construct]
Length = 336
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 230 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 273
>gi|348564396|ref|XP_003467991.1| PREDICTED: homeobox protein Hox-A1-like [Cavia porcellus]
Length = 333
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 228 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 271
>gi|395756652|ref|XP_003780400.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B1 [Pongo
abelii]
Length = 213
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 44 PHPTSPSTDYTTPLTALKY---PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 99
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 79 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNK 138
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL+RARR+EIA+ L+LNETQ
Sbjct: 139 YLSRARRVEIAATLELNETQV 159
>gi|399997|sp|P31259.1|HXB1_CHICK RecName: Full=Homeobox protein Hox-B1; AltName: Full=Ghox-lab
gi|833615|emb|CAA48418.1| Ghox-lab [Gallus gallus]
Length = 309
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 63 PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
PP A LL N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 198 PPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 257
>gi|363743436|ref|XP_003642841.1| PREDICTED: homeobox protein Hox-B1 [Gallus gallus]
Length = 310
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 63 PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
PP A LL N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 199 PPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 258
>gi|172087560|ref|XP_001913322.1| HOX1 [Oikopleura dioica]
gi|42601451|gb|AAS21474.1| HOX1 [Oikopleura dioica]
Length = 247
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 66 AALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
A S+ N SGRT F+ +QLTELEKEFH+NKYLTRARR+EIAS L LNETQ
Sbjct: 156 GAYQAQTSVGNGSGRTTFSTRQLTELEKEFHYNKYLTRARRVEIASNLALNETQV 210
>gi|395540366|ref|XP_003772126.1| PREDICTED: homeobox protein Hox-A1 [Sarcophilus harrisii]
Length = 333
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 227 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 270
>gi|520608|emb|CAA84514.1| Hox-1 homeodomain protein [Branchiostoma floridae]
gi|745774|prf||2016458A Hox-1 gene
Length = 95
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+GRTNFT KQLTELEKEFH+NKYLTRARR+EIA+ L LNETQ
Sbjct: 13 NNGRTNFTTKQLTELEKEFHYNKYLTRARRVEIAAALNLNETQ 55
>gi|112983632|ref|NP_034597.2| homeobox protein Hox-D1 [Mus musculus]
gi|111306630|gb|AAI20538.1| Homeo box D1 [Mus musculus]
gi|111306633|gb|AAI20540.1| Homeo box D1 [Mus musculus]
gi|148695234|gb|EDL27181.1| homeobox D1 [Mus musculus]
Length = 328
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 273
>gi|232263|sp|Q01822.1|HXD1_MOUSE RecName: Full=Homeobox protein Hox-D1; AltName: Full=Homeobox
protein Hox-4.9
gi|51426|emb|CAA42637.1| Hox-4.9 [Mus musculus]
Length = 327
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 232 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 272
>gi|59939347|gb|AAX12439.1| Dbuz\lab-PA [Drosophila buzzatii]
Length = 659
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/47 (89%), Positives = 44/47 (93%)
Query: 73 SLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
S NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 517 SSTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 563
>gi|28629621|gb|AAO43016.1| HoxA1 [Latimeria menadoensis]
Length = 116
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 12 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 55
>gi|313228753|emb|CBY17904.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 66 AALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
A S+ N SGRT F+ +QLTELEKEFH+NKYLTRARR+EIAS L LNETQ
Sbjct: 151 GAYQAQTSVGNGSGRTTFSTRQLTELEKEFHYNKYLTRARRVEIASNLALNETQV 205
>gi|88604704|gb|ABD46723.1| homeobox protein labial [Nymphon gracile]
Length = 364
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 41/49 (83%)
Query: 72 QSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QSL NN+GRT F KQLTELEKE H+NKYLTRARRIEIAS L LNETQ
Sbjct: 284 QSLNNNTGRTAFNTKQLTELEKEXHYNKYLTRARRIEIASALSLNETQV 332
>gi|226822845|gb|ACO83080.1| homeobox A1 isoform a (predicted) [Dasypus novemcinctus]
Length = 336
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 234 RTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 274
>gi|194742056|ref|XP_001953523.1| GF17803 [Drosophila ananassae]
gi|190626560|gb|EDV42084.1| GF17803 [Drosophila ananassae]
Length = 610
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/44 (93%), Positives = 43/44 (97%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
NNSGRTNFTNKQLTELEKEFHFN+YLTRARRIEIA+ LQLNETQ
Sbjct: 484 NNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 527
>gi|385654508|gb|AFI62005.1| Hox-C1a [Anguilla japonica]
Length = 342
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 43/49 (87%), Gaps = 3/49 (6%)
Query: 75 LNNSG---RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
++N+G RTNFT KQLTELEKEFHFNKYLTRARR+EIAS +QLNETQ
Sbjct: 218 VHNTGGAPRTNFTTKQLTELEKEFHFNKYLTRARRVEIASAMQLNETQV 266
>gi|351709860|gb|EHB12779.1| Homeobox protein Hox-D1, partial [Heterocephalus glaber]
Length = 244
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 149 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 189
>gi|326935934|ref|XP_003214019.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B1-like
[Meleagris gallopavo]
Length = 309
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 63 PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
PP A LL N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 198 PPKTAKVSEYGLLGQPNTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 257
>gi|441652002|ref|XP_004091028.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A1 [Nomascus
leucogenys]
Length = 336
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Query: 48 SPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNK 99
SP++D ++P + PP L N RTNFT KQLTELEKEFHFNK
Sbjct: 194 SPASDTSSPAQTFDWMKVKRNPPKTGKVGEYGYLGQPNGVRTNFTTKQLTELEKEFHFNK 253
Query: 100 YLTRARRIEIASVLQLNETQT 120
Y TRARR+EIA+ LQLNETQ
Sbjct: 254 YXTRARRVEIAAXLQLNETQV 274
>gi|255742480|gb|ACU32592.1| homeobox protein HoxD1 [Callorhinchus milii]
Length = 315
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEIANALQLNETQV 252
>gi|449493066|ref|XP_002192523.2| PREDICTED: homeobox protein Hox-A1 [Taeniopygia guttata]
Length = 162
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 63 PPSAALSQHQSLLN--NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP + + N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 41 PPKTGKAGEYGFVGQPNTVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ 99
>gi|255742441|gb|ACU32555.1| homeobox protein HoxB1 [Callorhinchus milii]
Length = 318
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
NS RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 208 NSTRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQ 250
>gi|312144882|gb|ADQ28184.1| homeobox A1 [Hipposideros armiger]
Length = 187
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 92 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 135
>gi|426347604|ref|XP_004041439.1| PREDICTED: homeobox protein Hox-B1 [Gorilla gorilla gorilla]
Length = 304
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP A L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 192 PPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 249
>gi|348562281|ref|XP_003466939.1| PREDICTED: homeobox protein Hox-B1-like [Cavia porcellus]
Length = 301
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
PP AA L G RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 189 PPKAAKVSELGLGAPGGVRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 247
>gi|301128879|emb|CBL59343.1| HoxA1 [Scyliorhinus canicula]
Length = 322
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EI++ LQLNETQ
Sbjct: 220 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVEISAALQLNETQ 262
>gi|24497526|ref|NP_002135.2| homeobox protein Hox-B1 [Homo sapiens]
gi|251757285|sp|P14653.2|HXB1_HUMAN RecName: Full=Homeobox protein Hox-B1; AltName: Full=Homeobox
protein Hox-2I
Length = 301
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP A L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 189 PPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 246
>gi|32384|emb|CAA34656.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP A L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 189 PPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 246
>gi|146324923|sp|A1YG01.1|HXB1_PANPA RecName: Full=Homeobox protein Hox-B1
gi|121483859|gb|ABM54226.1| HOXB1 [Pan paniscus]
Length = 301
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP A L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 189 PPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 246
>gi|125858494|ref|NP_001075041.1| homeobox protein Hox-B1 [Pan troglodytes]
gi|397514554|ref|XP_003827546.1| PREDICTED: homeobox protein Hox-B1 [Pan paniscus]
gi|146324924|sp|A2T6Z0.1|HXB1_PANTR RecName: Full=Homeobox protein Hox-B1
gi|124111133|gb|ABM91945.1| HOXB1 [Pan troglodytes]
Length = 301
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP A L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 189 PPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 246
>gi|4558069|pdb|1B72|A Chain A, Pbx1, Homeobox Protein Hox-B1DNA TERNARY COMPLEX
Length = 97
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Query: 46 PTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRA 104
PT+ + D+ + + PP A L + SG RTNFT +QLTELEKEFHFNKYL+RA
Sbjct: 6 PTARTFDW---MKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRA 62
Query: 105 RRIEIASVLQLNETQT 120
RR+EIA+ L+LNETQ
Sbjct: 63 RRVEIAATLELNETQV 78
>gi|119615152|gb|EAW94746.1| homeobox B1 [Homo sapiens]
Length = 304
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP A L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 192 PPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 249
>gi|321475851|gb|EFX86813.1| putative homeotic labial protein [Daphnia pulex]
Length = 592
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
NN+GRTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQ
Sbjct: 489 NNTGRTNFTTKQLTELEKEFHFNKYLTRARRIEIAAALQLNETQ 532
>gi|297465042|ref|XP_002703633.1| PREDICTED: homeobox protein Hox-D1 [Bos taurus]
Length = 322
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
GV+P SP++ + ++ P + +++ + +S RTNF+ KQLTELE
Sbjct: 180 GVYPKCASPASGLPAAFSTFEWMKVKRNAPKKSKFAEYGAATPSSAIRTNFSTKQLTELE 239
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 240 KEFHFNKYLTRARRIEIANSLQLNDTQV 267
>gi|1333931|emb|CAA29426.1| unnamed protein product [Mus musculus]
gi|1333932|emb|CAA29427.1| unnamed protein product [Mus musculus]
Length = 60
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 2 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 45
>gi|296204450|ref|XP_002749394.1| PREDICTED: homeobox protein Hox-D1 [Callithrix jacchus]
Length = 328
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 273
>gi|440892328|gb|ELR45561.1| Homeobox protein Hox-D1, partial [Bos grunniens mutus]
Length = 240
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
GV+P SP++ + ++ P + +++ + +S RTNF+ KQLTELE
Sbjct: 98 GVYPKCASPASGLPAAFSTFEWMKVKRNAPKKSKFAEYGAATPSSAIRTNFSTKQLTELE 157
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 158 KEFHFNKYLTRARRIEIANSLQLNDTQV 185
>gi|387202|gb|AAA37839.1| Hox1.6 protein [Mus musculus]
Length = 128
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 23 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 66
>gi|5817771|gb|AAD52911.1| labial protein [Porcellio scaber]
Length = 76
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/41 (92%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 28 RTNFTTKQLTELEKEFHFNKYLTRARRIEIASALQLNETQV 68
>gi|297471590|ref|XP_002685353.1| PREDICTED: homeobox protein Hox-D1 [Bos taurus]
gi|296490674|tpg|DAA32787.1| TPA: homeobox D1-like [Bos taurus]
Length = 322
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
GV+P SP++ + ++ P + +++ + +S RTNF+ KQLTELE
Sbjct: 180 GVYPKCASPASGLPAAFSTFEWMKVKRNAPKKSKFAEYGAATPSSAIRTNFSTKQLTELE 239
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 240 KEFHFNKYLTRARRIEIANSLQLNDTQV 267
>gi|402888726|ref|XP_003907702.1| PREDICTED: homeobox protein Hox-D1 [Papio anubis]
Length = 328
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 273
>gi|213514770|ref|NP_001133009.1| homeobox protein HoxC1ab [Salmo salar]
gi|157815966|gb|ABV82002.1| homeobox protein HoxC1ab [Salmo salar]
gi|158702339|gb|ABW77529.1| homeobox protein HoxC1ab [Salmo salar]
Length = 327
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 42/57 (73%)
Query: 64 PSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
PS H N RT+FT KQLTELEKEFHFNKYLTRARR+EIAS LQL+ETQ
Sbjct: 224 PSIPTDGHHITANGVLRTSFTTKQLTELEKEFHFNKYLTRARRVEIASALQLSETQV 280
>gi|332692464|gb|AEE90147.1| Homeobox A1a [Anguilla anguilla]
Length = 319
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR++IA+ L+LNETQ
Sbjct: 211 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVQIAAALRLNETQV 254
>gi|326454538|gb|ADZ74204.1| homeodomain protein HoxA1a [Hypophthalmichthys nobilis]
Length = 286
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 37 LSPLGV--HPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNK 86
LSPL V H SP +D + + PP + N+ RTNFT K
Sbjct: 157 LSPLHVAHHDACCSPLSDGVSTGQTFDWMKVKRNPPKTGKAGEYGFGGQPNTVRTNFTTK 216
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QLTELEKEFHFNKYLTRARR+EIA+ LQLNET
Sbjct: 217 QLTELEKEFHFNKYLTRARRVEIAAALQLNETHV 250
>gi|387230959|gb|AFJ72190.1| homeobox A1, partial [Chaerephon plicatus]
Length = 116
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 11 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 54
>gi|332209409|ref|XP_003253804.1| PREDICTED: homeobox protein Hox-D1 [Nomascus leucogenys]
Length = 328
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 273
>gi|146324925|sp|A2T7J2.1|HXB1_PONPY RecName: Full=Homeobox protein Hox-B1
gi|124054159|gb|ABM89270.1| HOXB1 [Pongo pygmaeus]
Length = 301
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 44 PHPTSPSTDYTTPLTALKY---PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 99
P P+ P+T +K PP A L + SG RTNFT +QLTELEKEFHFNK
Sbjct: 167 PCPSEPNTPTARTFDWMKVKRNPPKTAKVSELGLGSPSGLRTNFTTRQLTELEKEFHFNK 226
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL+RARR+EIA+ L+LNETQ
Sbjct: 227 YLSRARRVEIAATLELNETQV 247
>gi|1110451|dbj|BAA08728.1| HrHox-1 [Halocynthia roretzi]
Length = 318
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 39/43 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
+GRTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L LNETQ
Sbjct: 95 GNGRTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALLLNETQ 137
>gi|385654464|gb|AFI61967.1| Hox-A1a [Anguilla japonica]
Length = 319
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR++IA+ L+LNETQ
Sbjct: 211 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVQIAAALRLNETQV 254
>gi|345805490|ref|XP_548172.3| PREDICTED: homeobox protein Hox-B1 [Canis lupus familiaris]
Length = 305
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 44 PHPTSPSTDYTTPLTALKY---PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 99
P P+ PST +K PP A L G RTNFT +QLTELEKEFHFNK
Sbjct: 171 PCPSEPSTPTARTFDWMKVKRNPPKTAKVSEPGLGAPGGLRTNFTTRQLTELEKEFHFNK 230
Query: 100 YLTRARRIEIASVLQLNETQ 119
YL+RARR+EIA+ L+LNETQ
Sbjct: 231 YLSRARRVEIAATLELNETQ 250
>gi|426220823|ref|XP_004004611.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1 [Ovis
aries]
Length = 276
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 181 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 221
>gi|410969020|ref|XP_003990996.1| PREDICTED: homeobox protein Hox-D1 [Felis catus]
Length = 213
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
G +P SP++ + ++ P + L+++ + +S RTNF+ KQLTELE
Sbjct: 71 GAYPKSASPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGAASPSSAIRTNFSTKQLTELE 130
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 131 KEFHFNKYLTRARRIEIANSLQLNDTQV 158
>gi|403279475|ref|XP_003931275.1| PREDICTED: homeobox protein Hox-B1 [Saimiri boliviensis
boliviensis]
Length = 306
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
PP A L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 194 PPKTAKVSELGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 252
>gi|359323891|ref|XP_852467.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1, partial
[Canis lupus familiaris]
Length = 251
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 156 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 196
>gi|332692515|gb|AEE90192.1| Homeobox C1a [Anguilla anguilla]
Length = 342
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 3/49 (6%)
Query: 75 LNNSG---RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
++N+G RTNFT KQLTELEKEFHFNKYLTRARR+EIA +QLNETQ
Sbjct: 218 VHNTGGAPRTNFTTKQLTELEKEFHFNKYLTRARRVEIACAMQLNETQV 266
>gi|399996|sp|P31357.1|HXB1_AMBME RecName: Full=Homeobox protein Hox-B1; AltName: Full=AHox1
gi|62414|emb|CAA33599.1| Ahox1 protein product (184 AA) [Ambystoma mexicanum]
Length = 184
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
NS RTNFT KQL+ELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 88 NSIRTNFTTKQLSELEKEFHFNKYLTRARRVEIAATLELNETQV 131
>gi|387230961|gb|AFJ72191.1| homeobox A1, partial [Aselliscus stoliczkanus]
Length = 110
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 5 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 48
>gi|123204438|gb|ABM73554.1| homeodomain protein [Megalobrama amblycephala]
Length = 299
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 41/45 (91%)
Query: 75 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
L N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 204 LQNTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 248
>gi|359754095|gb|AEV59517.1| HOXB1 [Macropus eugenii]
Length = 298
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Query: 33 IPSELSPLGVHPHPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSG-RTNFTNKQLTEL 91
PSELS PT+ + D+ + + PP A L G RTNFT +QLTEL
Sbjct: 164 CPSELS------MPTTQTFDW---MKVKRNPPKTAKVSDMGLGPAGGIRTNFTTRQLTEL 214
Query: 92 EKEFHFNKYLTRARRIEIASVLQLNETQ 119
EKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 215 EKEFHFNKYLSRARRVEIAATLELNETQ 242
>gi|403259136|ref|XP_003922086.1| PREDICTED: homeobox protein Hox-D1 [Saimiri boliviensis
boliviensis]
Length = 280
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 185 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 225
>gi|296202593|ref|XP_002748522.1| PREDICTED: homeobox protein Hox-B1 [Callithrix jacchus]
Length = 304
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP A L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 192 PPKTAKVSELGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 249
>gi|4322055|gb|AAD15937.1| homeobox protein [Danio rerio]
Length = 315
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 212 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 255
>gi|387230953|gb|AFJ72187.1| homeobox A1, partial [Hipposideros armiger]
gi|387230955|gb|AFJ72188.1| homeobox A1, partial [Taphozous melanopogon]
Length = 117
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 12 NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 55
>gi|157786814|ref|NP_001099354.1| homeobox protein Hox-D1 [Rattus norvegicus]
gi|149022297|gb|EDL79191.1| homeo box D1 (predicted) [Rattus norvegicus]
Length = 328
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
G P P SP++ + ++ P + LS++ + +S RTNF+ KQLTELE
Sbjct: 186 GACPKPASPTSGLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPSSAIRTNFSTKQLTELE 245
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARR+EIA+ LQLN+TQ
Sbjct: 246 KEFHFNKYLTRARRMEIANCLQLNDTQV 273
>gi|358334415|dbj|GAA52858.1| homeotic protein labial, partial [Clonorchis sinensis]
Length = 678
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
Query: 45 HPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRA 104
+P + S+D T P S LS S+ +GR NFTNKQLTELEKEFHFN+YLTRA
Sbjct: 553 YPWNTSSDCTGATQTTVLPSS--LSGQNSM---NGRINFTNKQLTELEKEFHFNRYLTRA 607
Query: 105 RRIEIASVLQLNETQT 120
RRIEIA+ L L ETQ
Sbjct: 608 RRIEIANDLGLTETQV 623
>gi|126308236|ref|XP_001367047.1| PREDICTED: homeobox protein Hox-B1-like [Monodelphis domestica]
Length = 298
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Query: 33 IPSELSPLGVHPHPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSG-RTNFTNKQLTEL 91
PSELS PT+ + D+ + + PP A L G RTNFT +QLTEL
Sbjct: 164 CPSELS------TPTTQTFDW---MKVKRNPPKTAKVSDMGLGPAGGIRTNFTTRQLTEL 214
Query: 92 EKEFHFNKYLTRARRIEIASVLQLNETQ 119
EKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 215 EKEFHFNKYLSRARRVEIAATLELNETQ 242
>gi|431894937|gb|ELK04730.1| Homeobox protein Hox-D1 [Pteropus alecto]
Length = 320
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
G +P +SP++ + ++ P + L+++ + +S RTNF+ KQLTELE
Sbjct: 179 GAYPKSSSPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGAASPSSAIRTNFSTKQLTELE 238
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 239 KEFHFNKYLTRARRIEIANSLQLNDTQV 266
>gi|149724534|ref|XP_001499202.1| PREDICTED: homeobox protein Hox-B1-like [Equus caballus]
Length = 301
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 207 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 247
>gi|431909010|gb|ELK12601.1| Homeobox protein Hox-A1 [Pteropus alecto]
Length = 333
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RT+FT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 228 NAVRTSFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 271
>gi|226693400|ref|NP_032292.3| homeobox protein Hox-B1 [Mus musculus]
gi|123272|sp|P17919.1|HXB1_MOUSE RecName: Full=Homeobox protein Hox-B1; AltName: Full=Homeobox
protein Hox-2.9
gi|297528|emb|CAA37238.1| hox-2.9 [Mus musculus]
gi|73695289|gb|AAI03598.1| Homeo box B1 [Mus musculus]
gi|73695291|gb|AAI03599.1| Homeo box B1 [Mus musculus]
gi|73695454|gb|AAI03607.1| Homeo box B1 [Mus musculus]
gi|148684086|gb|EDL16033.1| homeobox B1 [Mus musculus]
Length = 297
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 243
>gi|301617253|ref|XP_002938063.1| PREDICTED: homeobox protein Hox-B1-like [Xenopus (Silurana)
tropicalis]
Length = 303
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 210 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 253
>gi|301128905|emb|CBL59367.1| HoxD1 [Scyliorhinus canicula]
Length = 309
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 49/74 (66%), Gaps = 17/74 (22%)
Query: 47 TSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 106
T+ +TDY P PPS A RTNFT KQLTELEKEFHFNKYLTRARR
Sbjct: 188 TAKTTDYGIPS-----PPSTA------------RTNFTTKQLTELEKEFHFNKYLTRARR 230
Query: 107 IEIASVLQLNETQT 120
+EIA+ LQL+ETQ
Sbjct: 231 VEIANALQLSETQV 244
>gi|255661304|gb|ACU25808.1| homeobox protein B1a [Anguilla japonica]
Length = 147
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 103 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 146
>gi|26350639|dbj|BAC38956.1| unnamed protein product [Mus musculus]
Length = 336
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 39/44 (88%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNF KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 231 NAVRTNFNTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 274
>gi|344285421|ref|XP_003414460.1| PREDICTED: hypothetical protein LOC100674251 [Loxodonta africana]
Length = 230
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 136 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 176
>gi|355564999|gb|EHH21488.1| hypothetical protein EGK_04568, partial [Macaca mulatta]
Length = 214
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 119 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 159
>gi|311272696|ref|XP_001925052.2| PREDICTED: homeobox protein Hox-D1-like [Sus scrofa]
Length = 327
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
Query: 40 LGVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTEL 91
LG +P SP++ + ++ P + L+++ + S RTNF+ KQLTEL
Sbjct: 184 LGAYPTSASPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGAASPPSAIRTNFSTKQLTEL 243
Query: 92 EKEFHFNKYLTRARRIEIASVLQLNETQT 120
EKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 244 EKEFHFNKYLTRARRIEIANSLQLNDTQV 272
>gi|28629641|gb|AAO43026.1| HoxB1 [Latimeria menadoensis]
Length = 107
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 12 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQ 54
>gi|62084737|gb|AAX62801.1| Hox1 [Oikopleura dioica]
Length = 220
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N SGRT F+ +QLTELEKEFH+NKYLTRARR+EIAS L LNETQ
Sbjct: 168 NGSGRTTFSTRQLTELEKEFHYNKYLTRARRVEIASNLALNETQV 212
>gi|255661306|gb|ACU25809.1| homeobox protein B1a [Anguilla japonica]
Length = 58
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 14 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQ 56
>gi|220898187|gb|ACL81442.1| HoxB1 [Latimeria menadoensis]
Length = 309
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 214 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQ 256
>gi|23503781|emb|CAD52137.1| SI:dZ227P06.2.2 (homeo box A1a) [Danio rerio]
Length = 294
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 191 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 234
>gi|18858823|ref|NP_571611.1| homeobox protein Hox-A1a [Danio rerio]
gi|60392416|sp|Q98SI1.1|HXA1A_DANRE RecName: Full=Homeobox protein Hox-A1a; Short=Hox-A1
gi|13397813|emb|CAC34565.1| Hoxa1a protein [Danio rerio]
gi|23503780|emb|CAD52136.1| SI:dZ227P06.2.1 (homeo box A1a) [Danio rerio]
gi|190337000|gb|AAI62701.1| Hoxa1a protein [Danio rerio]
Length = 329
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 226 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 269
>gi|2979619|gb|AAC06195.1| homeobox-containing transcription factor Hoxb-1, partial [Gallus
gallus]
Length = 75
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 33 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQ 75
>gi|359754116|gb|AEV59536.1| HOXD1 [Macropus eugenii]
Length = 334
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
G +P SP++ T L+ ++ P + LS++ ++S RTNF+ KQLTELE
Sbjct: 192 GSYPKSVSPASGLPTALSTFEWMKVKRNAPKKSKLSEYGVHSSSSTIRTNFSTKQLTELE 251
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQT 120
KEFHFNKYLTRARRIEIA LQLN+TQ
Sbjct: 252 KEFHFNKYLTRARRIEIAHSLQLNDTQV 279
>gi|13397815|emb|CAC34566.1| Hoxa1a protein [Danio rerio]
Length = 294
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 191 NTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 234
>gi|301762924|ref|XP_002916866.1| PREDICTED: homeobox protein Hox-B1-like [Ailuropoda melanoleuca]
gi|281344378|gb|EFB19962.1| hypothetical protein PANDA_005007 [Ailuropoda melanoleuca]
Length = 304
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 210 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 249
>gi|311267486|ref|XP_003131593.1| PREDICTED: homeobox protein Hox-B1-like [Sus scrofa]
Length = 301
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 207 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 247
>gi|149639705|ref|XP_001515180.1| PREDICTED: homeobox protein Hox-D1-like [Ornithorhynchus anatinus]
Length = 263
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 168 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 208
>gi|410980873|ref|XP_003996798.1| PREDICTED: homeobox protein Hox-B1 [Felis catus]
Length = 304
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 210 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 250
>gi|301128891|emb|CBL59354.1| HoxB1 [Scyliorhinus canicula]
Length = 311
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 210 NTMRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 253
>gi|332692493|gb|AEE90173.1| Homeobox B1a [Anguilla anguilla]
Length = 316
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 221 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 264
>gi|395837292|ref|XP_003791572.1| PREDICTED: homeobox protein Hox-D1 [Otolemur garnettii]
Length = 325
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLN+TQ
Sbjct: 230 RTNFSTKQLTELEKEFHFNKYLTRARRMEIANCLQLNDTQV 270
>gi|402899479|ref|XP_003912723.1| PREDICTED: homeobox protein Hox-B1 [Papio anubis]
Length = 304
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 192 PPKTGKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 249
>gi|385654484|gb|AFI61985.1| Hox-B1a [Anguilla japonica]
Length = 316
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 221 NTIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 264
>gi|14010235|gb|AAK51910.1|AF361326_1 labial [Folsomia candida]
Length = 50
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/40 (95%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT KQLTELEKEFHFNKYLTRARRIEIAS LQLNETQ
Sbjct: 11 RTNFTTKQLTELEKEFHFNKYLTRARRIEIASSLQLNETQ 50
>gi|124053432|ref|NP_001074229.1| homeobox protein Hox-B1 [Macaca mulatta]
gi|146324920|sp|A2D4R4.1|HXB1_ATEGE RecName: Full=Homeobox protein Hox-B1
gi|146324921|sp|A2D649.1|HXB1_MACMU RecName: Full=Homeobox protein Hox-B1
gi|146324922|sp|A2T6H5.1|HXB1_MACNE RecName: Full=Homeobox protein Hox-B1
gi|121503182|gb|ABM55142.1| HOXB1 [Macaca mulatta]
gi|122053859|gb|ABM65911.1| HOXB1 [Ateles geoffroyi]
gi|124013549|gb|ABM88023.1| HOXB1 [Macaca nemestrina]
Length = 304
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 63 PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 192 PPKTGKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 249
>gi|109491748|ref|XP_001081344.1| PREDICTED: homeobox protein Hox-B1 [Rattus norvegicus]
gi|293351798|ref|XP_220896.4| PREDICTED: homeobox protein Hox-B1 [Rattus norvegicus]
gi|149053991|gb|EDM05808.1| homeo box B1 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 297
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 243
>gi|431890737|gb|ELK01616.1| Homeobox protein Hox-B1 [Pteropus alecto]
Length = 304
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 44 PHPTSPSTDYTTPLTALKY---PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 99
P P+ PST +K PP A L G RTNFT +QLTELEKEFHFNK
Sbjct: 170 PCPSEPSTPTARTFDWMKVKRNPPKTAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNK 229
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL+RARR+EIA+ L+LNETQ
Sbjct: 230 YLSRARRVEIAATLELNETQV 250
>gi|355568478|gb|EHH24759.1| hypothetical protein EGK_08474 [Macaca mulatta]
Length = 330
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 236 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 276
>gi|344268816|ref|XP_003406252.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1-like
[Loxodonta africana]
Length = 329
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 234 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 274
>gi|444517762|gb|ELV11779.1| Homeobox protein Hox-B1 [Tupaia chinensis]
Length = 298
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 204 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 243
>gi|291405877|ref|XP_002719363.1| PREDICTED: Homeobox protein Hox-B1-like [Oryctolagus cuniculus]
Length = 306
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 44 PHPTSPSTDYTTPLTALKY---PPSAALSQHQSLLNNSG-RTNFTNKQLTELEKEFHFNK 99
P P+ PST +K PP A L G RTNF+ +QLTELEKEFHFNK
Sbjct: 172 PCPSEPSTPAARTFDWMKVKRNPPKTAKVSELGLGAPGGLRTNFSTRQLTELEKEFHFNK 231
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL+RARR+EIA+ L+LNETQ
Sbjct: 232 YLSRARRVEIAATLELNETQV 252
>gi|426237819|ref|XP_004012855.1| PREDICTED: homeobox protein Hox-B1 [Ovis aries]
Length = 302
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 208 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 247
>gi|329664272|ref|NP_001192883.1| homeobox protein Hox-B1 [Bos taurus]
gi|296476537|tpg|DAA18652.1| TPA: Homeobox protein Hox-B1-like [Bos taurus]
Length = 302
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 208 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 247
>gi|440910528|gb|ELR60322.1| Homeobox protein Hox-B1 [Bos grunniens mutus]
Length = 302
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 208 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 247
>gi|395532692|ref|XP_003768402.1| PREDICTED: homeobox protein Hox-B1 [Sarcophilus harrisii]
Length = 298
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 242
>gi|355750649|gb|EHH54976.1| hypothetical protein EGM_04094, partial [Macaca fascicularis]
Length = 166
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 71 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 111
>gi|281349082|gb|EFB24666.1| hypothetical protein PANDA_019123 [Ailuropoda melanoleuca]
Length = 198
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 103 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 143
>gi|395826608|ref|XP_003786509.1| PREDICTED: homeobox protein Hox-B1 [Otolemur garnettii]
Length = 301
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 207 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 247
>gi|47213842|emb|CAG00646.1| unnamed protein product [Tetraodon nigroviridis]
Length = 284
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 41/45 (91%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+N+ RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 195 HNAIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQV 239
>gi|327275879|ref|XP_003222699.1| PREDICTED: homeobox protein Hox-B1-like [Anolis carolinensis]
Length = 348
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 252 RTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQV 292
>gi|354474774|ref|XP_003499605.1| PREDICTED: homeobox protein Hox-B1-like [Cricetulus griseus]
gi|344249147|gb|EGW05251.1| Homeobox protein Hox-B1 [Cricetulus griseus]
Length = 297
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 243
>gi|395519831|ref|XP_003764045.1| PREDICTED: homeobox protein Hox-D1 [Sarcophilus harrisii]
Length = 335
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA LQLN+TQ
Sbjct: 239 RTNFSTKQLTELEKEFHFNKYLTRARRIEIAHSLQLNDTQV 279
>gi|22316137|emb|CAD44460.1| homeo box B1b protein [Danio rerio]
Length = 307
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQ 251
>gi|355753953|gb|EHH57918.1| hypothetical protein EGM_07662 [Macaca fascicularis]
Length = 306
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 212 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 252
>gi|51434|emb|CAA42078.1| 297 aa protein [Mus musculus]
Length = 297
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA L+LNETQ
Sbjct: 203 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAPTLELNETQV 243
>gi|270341323|gb|AAS07614.2| labial homeodomain protein 1 [Perionyx excavatus]
Length = 272
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 39/41 (95%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
GRTNFTNKQLTELEKEFHF++YLTR+RRIEIA+ L LNETQ
Sbjct: 158 GRTNFTNKQLTELEKEFHFSRYLTRSRRIEIAASLGLNETQ 198
>gi|13397819|emb|CAC34568.1| Hoxb1b protein [Danio rerio]
Length = 307
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQ 251
>gi|145279635|ref|NP_571217.2| homeobox protein Hox-B1b [Danio rerio]
gi|110825726|sp|Q90423.3|HXB1B_DANRE RecName: Full=Homeobox protein Hox-B1b; AltName: Full=Homeobox
protein Hox-A1
gi|126631497|gb|AAI33877.1| Homeo box B1b [Danio rerio]
Length = 307
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQ 251
>gi|149513620|ref|XP_001516750.1| PREDICTED: homeobox protein Hox-B1-like [Ornithorhynchus anatinus]
Length = 219
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 125 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 165
>gi|790874|gb|AAB17583.1| homeodomain protein, partial [Polycelis nigra]
Length = 99
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N +GRTNFTNKQLTELEKEFHFN+YLTRARRIEIA + L+ETQ
Sbjct: 23 NITGRTNFTNKQLTELEKEFHFNQYLTRARRIEIAKSMTLSETQ 66
>gi|213513696|ref|NP_001133055.1| homeobox protein HoxB1ab [Salmo salar]
gi|157816115|gb|ABV82076.1| homeobox protein HoxB1ab [Salmo salar]
gi|158702284|gb|ABW77482.1| homeobox protien HoxB1ab [Salmo salar]
Length = 313
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 63 PPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
P +A ++ + N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 205 PKTAKVADYGMGPQNTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQV 262
>gi|193956|gb|AAA37853.1| homeobox protein, partial [Mus musculus]
Length = 110
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 15 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQV 55
>gi|213512563|ref|NP_001133049.1| homeobox protein HoxB1aa [Salmo salar]
gi|157816097|gb|ABV82067.1| homeobox protein HoxB1aa [Salmo salar]
gi|158702272|gb|ABW77471.1| homeobox protein HoxB1aa [Salmo salar]
Length = 311
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 217 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQV 260
>gi|332692504|gb|AEE90182.1| Homeobox B1b [Anguilla anguilla]
Length = 314
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 221 NTIRTNFTTKQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 263
>gi|224813654|gb|ACN65056.1| homeo box B1b [Megalobrama amblycephala]
Length = 306
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 211 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQ 250
>gi|385654486|gb|AFI61986.1| Hox-B1b [Anguilla japonica]
Length = 314
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 221 NTIRTNFTTKQLTELEKEFHFNKYLSRARRVEIAATLELNETQ 263
>gi|19702243|gb|AAL93216.1|AF410907_1 HoxQ8 [Petromyzon marinus]
Length = 60
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 5 RTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQV 45
>gi|1127810|gb|AAB04107.1| Hoxa-1 [Danio rerio]
Length = 308
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 212 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQV 252
>gi|426337805|ref|XP_004032887.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1 [Gorilla
gorilla gorilla]
Length = 328
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQ
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQV 273
>gi|432871992|ref|XP_004072063.1| PREDICTED: homeobox protein Hox-B1a-like [Oryzias latipes]
Length = 362
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N++ RTNFT +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 258 NSAMRTNFTTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQV 302
>gi|262263020|gb|ACY39980.1| HoxD1 [Heterodontus francisci]
Length = 309
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 39/43 (90%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+ RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ LQL+ETQ
Sbjct: 202 TARTNFTTKQLTELEKEFHFNKYLTRARRVEIANALQLSETQV 244
>gi|317419673|emb|CBN81710.1| Homeobox protein Hox-B1b [Dicentrarchus labrax]
Length = 287
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%), Gaps = 5/52 (9%)
Query: 69 SQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
SQH + RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 194 SQHNVI-----RTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQV 240
>gi|15680245|gb|AAH14477.1| Homeobox D1 [Homo sapiens]
gi|123982844|gb|ABM83163.1| homeobox D1 [synthetic construct]
gi|123997523|gb|ABM86363.1| homeobox D1 [synthetic construct]
Length = 328
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQ
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQV 273
>gi|395732504|ref|XP_003776075.1| PREDICTED: homeobox protein Hox-D1 [Pongo abelii]
Length = 325
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQ
Sbjct: 230 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQV 270
>gi|351713526|gb|EHB16445.1| Homeobox protein Hox-B1 [Heterocephalus glaber]
Length = 301
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
Query: 30 KVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSG-RTNFTNKQL 88
+ PSE S PTS + D+ + + PP A L G RTNF+ +QL
Sbjct: 165 EASCPSEAS------TPTSRTFDW---MKVKRNPPKTAKGSELGLGAAGGVRTNFSTRQL 215
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 216 TELEKEFHFNKYLSRARRVEIAATLELNETQV 247
>gi|13375632|ref|NP_078777.1| homeobox protein Hox-D1 [Homo sapiens]
gi|17378648|sp|Q9GZZ0.1|HXD1_HUMAN RecName: Full=Homeobox protein Hox-D1; AltName: Full=Homeobox
protein Hox-GG
gi|11095618|gb|AAG29939.1|AF202118_1 HOX D1 protein [Homo sapiens]
gi|12005429|gb|AAG44444.1|AF241528_1 homeobox-containing transcripton factor HOXD1 [Homo sapiens]
gi|119631485|gb|EAX11080.1| homeobox D1 [Homo sapiens]
gi|189054291|dbj|BAG36811.1| unnamed protein product [Homo sapiens]
Length = 328
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQ
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQV 273
>gi|332815255|ref|XP_001144367.2| PREDICTED: homeobox protein Hox-D1 [Pan troglodytes]
Length = 346
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQ
Sbjct: 251 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQV 291
>gi|208968515|dbj|BAG74096.1| homeobox D1 [synthetic construct]
Length = 328
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQ
Sbjct: 233 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQV 273
>gi|190337170|gb|AAI62942.1| Hoxb1a protein [Danio rerio]
Length = 316
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 223 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 265
>gi|397489150|ref|XP_003815597.1| PREDICTED: homeobox protein Hox-D1, partial [Pan paniscus]
Length = 249
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ L LN+TQ
Sbjct: 154 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQV 194
>gi|387230965|gb|AFJ72193.1| homeobox A1, partial [Rousettus leschenaultii]
Length = 117
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RT+FT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 12 NAVRTSFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 55
>gi|224813646|gb|ACN65052.1| homeo box B1a [Megalobrama amblycephala]
Length = 316
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 223 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 265
>gi|387230957|gb|AFJ72189.1| homeobox A1, partial [Cynopterus sphinx]
Length = 110
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RT+FT KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 5 NAVRTSFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQV 48
>gi|410895377|ref|XP_003961176.1| PREDICTED: homeobox protein Hox-B1b-like [Takifugu rubripes]
Length = 280
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 199 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQV 239
>gi|345327995|ref|XP_003431224.1| PREDICTED: homeobox protein Hox-D1-like [Ornithorhynchus anatinus]
Length = 113
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 18 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQ 57
>gi|18858829|ref|NP_571190.1| homeobox protein Hox-B1a [Danio rerio]
gi|4322070|gb|AAD15944.1| homeobox protein [Danio rerio]
Length = 318
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 225 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 267
>gi|2495323|sp|Q90346.1|HXB1_CYPCA RecName: Full=Homeobox protein Hox-B1
gi|1483240|emb|CAA62554.1| hoxb-1 [Cyprinus carpio]
Length = 315
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 222 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQV 265
>gi|60392402|sp|O42366.2|HXB1A_DANRE RecName: Full=Homeobox protein Hox-B1a; Short=Hox-B1
gi|26984641|emb|CAD59118.1| SI:dZ254O17.8 (homeo box protein B1a) [Danio rerio]
Length = 311
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 218 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 260
>gi|119370783|sp|Q1KKW8.1|HXB1B_FUGRU RecName: Full=Homeobox protein Hox-B1b
gi|94482809|gb|ABF22426.1| homeobox protein HoxB1b [Takifugu rubripes]
Length = 280
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 199 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQV 239
>gi|1483239|emb|CAA62553.1| hoxb-1 [Cyprinus carpio]
Length = 310
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 217 NTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELNETQV 260
>gi|432925210|ref|XP_004080698.1| PREDICTED: homeobox protein Hox-B1b-like [Oryzias latipes]
gi|74267549|dbj|BAE44273.1| hoxB1b [Oryzias latipes]
gi|83016959|dbj|BAE53484.1| hoxB1b [Oryzias latipes]
Length = 278
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARRIE+A+ L LNETQ
Sbjct: 191 RTNFTTKQLTELEKEFHFNKYLTRARRIEVAASLDLNETQV 231
>gi|291461546|dbj|BAI83407.1| labial [Parasteatoda tepidariorum]
Length = 341
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 38/43 (88%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
SGRTNF+ KQLTELEKEFHF+KYL RARRIEIAS L LNETQ
Sbjct: 235 SGRTNFSTKQLTELEKEFHFHKYLNRARRIEIASSLGLNETQV 277
>gi|385341|gb|AAB25675.1| Xhox2.9 product {homeodomain} [Xenopus laevis, embryo, Peptide
Partial, 66 aa]
Length = 66
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 39/44 (88%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N RTNFT KQLTELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 2 NIIRTNFTTKQLTELEKEFHFNKYLTRARRVEIAATLELNETQV 45
>gi|150409838|gb|ABR68660.1| hoxb1b [Morone saxatilis]
Length = 289
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNETQ
Sbjct: 202 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAASLELNETQV 242
>gi|326454548|gb|ADZ74209.1| homeodomain protein HoxA1a [Luciobrama macrocephalus]
Length = 287
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
Query: 37 LSPLGV--HPHPTSPSTDYTTPLTALKY------PPSAALSQHQSLLN--NSGRTNFTNK 86
LSPL V H SP +D + + PP + N+ RTNFT K
Sbjct: 157 LSPLHVAHHDACCSPLSDGVSTGQTFDWMKVKRNPPKTGKAGEYGFGGQPNTVRTNFTTK 216
Query: 87 QLTELEKEFHFNKYLTRARRIE-IASVLQLNETQT 120
QLTELEKEFHFNKYLTRARR+E IA+ LQLNETQ
Sbjct: 217 QLTELEKEFHFNKYLTRARRVEHIAAALQLNETQV 251
>gi|34304653|gb|AAQ63432.1| Hox1 [Oikopleura dioica]
Length = 60
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N SGRT F+ +QLTELEKEFH+NKYLTRARR+EIAS L LNETQ
Sbjct: 1 NGSGRTTFSTRQLTELEKEFHYNKYLTRARRVEIASNLALNETQV 45
>gi|432107304|gb|ELK32718.1| Homeobox protein Hox-D1 [Myotis davidii]
Length = 114
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 26 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 66
>gi|12857052|dbj|BAB30874.1| unnamed protein product [Mus musculus]
Length = 297
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEK FHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 203 RTNFTTRQLTELEKGFHFNKYLSRARRVEIAATLELNETQV 243
>gi|11139614|gb|AAG31762.1| homeobox B1 [Homo sapiens]
gi|120974174|gb|ABM46651.1| HOXB1 [Gorilla gorilla]
Length = 108
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 73 SLLNNSG-RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
L + SG RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 6 GLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 54
>gi|339241423|ref|XP_003376637.1| homeotic protein labial [Trichinella spiralis]
gi|316974634|gb|EFV58118.1| homeotic protein labial [Trichinella spiralis]
Length = 218
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 43/59 (72%), Gaps = 6/59 (10%)
Query: 68 LSQHQSLLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
L H S L NSG RTNFT KQLTELEKEFH N+YLTRARRIEIAS L LNETQ
Sbjct: 51 LEGHNSNLLNSGCTSVPNRTNFTTKQLTELEKEFHTNRYLTRARRIEIASQLGLNETQV 109
>gi|256082746|ref|XP_002577614.1| pyruvate kinase [Schistosoma mansoni]
gi|360043170|emb|CCD78582.1| putative pyruvate kinase [Schistosoma mansoni]
Length = 1126
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 3/51 (5%)
Query: 73 SLLNN---SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
++NN SGRTNFT +QLTELEKEFHFN+YL+RARRIEIA+ L L ETQ
Sbjct: 557 DIINNNSLSGRTNFTTRQLTELEKEFHFNRYLSRARRIEIAADLNLTETQV 607
>gi|387231273|gb|AFJ72347.1| homeobox B1, partial [Neophocaena phocaenoides]
Length = 107
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 14 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 54
>gi|58396725|gb|AAW72802.1| homeobox protein lab02, partial [Urechis unicinctus]
Length = 48
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/39 (92%), Positives = 37/39 (94%)
Query: 81 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
TNFTNKQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 1 TNFTNKQLTELEKEFHFNKYLTRARRIEIAAALGLNETQ 39
>gi|28629671|gb|AAO43041.1| HoxD1 [Latimeria menadoensis]
Length = 116
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 38/44 (86%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYL+R RRIEIA+ L LNETQ
Sbjct: 12 NTARTNFTTKQLTELEKEFHFNKYLSRTRRIEIANALHLNETQV 55
>gi|158702293|gb|ABW77490.1| homeobox protein HoxB1ba [Salmo salar]
Length = 299
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF KQLTELEKEFHFN+YLTRARR+E+A++L+LNETQ
Sbjct: 212 RTNFNTKQLTELEKEFHFNRYLTRARRVEVAAILELNETQV 252
>gi|387231259|gb|AFJ72340.1| homeobox B1, partial [Cynopterus sphinx]
Length = 108
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 14 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 54
>gi|255661296|gb|ACU25804.1| homeobox protein A1a [Anguilla japonica]
Length = 56
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRARR++IA+ L+LNETQ
Sbjct: 12 NTVRTNFTTKQLTELEKEFHFNKYLTRARRVQIAAALRLNETQV 55
>gi|126326650|ref|XP_001376994.1| PREDICTED: homeobox protein Hox-D1-like [Monodelphis domestica]
Length = 324
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 37/41 (90%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARR+EIA LQLN+TQ
Sbjct: 228 RTNFSTKQLTELEKEFHFNKYLTRARRLEIAHSLQLNDTQV 268
>gi|220898211|gb|ACL81464.1| HoxD1 [Latimeria menadoensis]
Length = 307
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 38/44 (86%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYL+R RRIEIA+ L LNETQ
Sbjct: 203 NTARTNFTTKQLTELEKEFHFNKYLSRTRRIEIANALHLNETQV 246
>gi|122934897|gb|ABM68193.1| HOXB1 [Lagothrix lagotricha]
Length = 108
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 14 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 54
>gi|387232063|gb|AFJ72742.1| homeobox D1, partial [Cynopterus sphinx]
Length = 69
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 15 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 55
>gi|18150503|gb|AAL61641.1|AF434665_1 Hox1w [Petromyzon marinus]
Length = 404
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 302 RTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQ 341
>gi|213513177|ref|NP_001133027.1| homeobox protein HoxD1aa [Salmo salar]
gi|157816019|gb|ABV82028.1| homeobox protein HoxD1aa [Salmo salar]
gi|158702370|gb|ABW77557.1| homeobox protein HoxD1aa [Salmo salar]
Length = 301
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%), Gaps = 3/49 (6%)
Query: 75 LNNSG---RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
L+N+G RTNFT KQLTELEKEFHFNKYLTR+RR+EIA L LNETQ
Sbjct: 196 LSNAGAIPRTNFTTKQLTELEKEFHFNKYLTRSRRVEIAHGLHLNETQV 244
>gi|47207843|emb|CAF90661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 348
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N++ RTNF+ +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 285 NSAIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 328
>gi|18858843|ref|NP_571606.1| homeobox protein Hox-C1a [Danio rerio]
gi|60392443|sp|Q98SH9.1|HXC1A_DANRE RecName: Full=Homeobox protein Hox-C1a
gi|13397817|emb|CAC34567.1| Hoxc1a protein [Danio rerio]
gi|190336994|gb|AAI62691.1| Homeo box C1a [Danio rerio]
gi|190338675|gb|AAI62694.1| Homeo box C1a [Danio rerio]
Length = 302
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/40 (90%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQL+ETQ
Sbjct: 219 RTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQ 258
>gi|4322094|gb|AAD15956.1| homeobox protein [Danio rerio]
Length = 84
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/41 (87%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYLTRARRIEIA+ LQL+ETQ
Sbjct: 1 RTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQV 41
>gi|154183842|gb|ABS70781.1| Hoxb1b [Haplochromis burtoni]
Length = 286
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYL+RARR+E+A+ L+LNETQ
Sbjct: 202 RTNFTTKQLTELEKEFHFNKYLSRARRVEVAASLELNETQV 242
>gi|387232065|gb|AFJ72743.1| homeobox D1, partial [Aselliscus stoliczkanus]
Length = 68
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 1 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 41
>gi|38004426|gb|AAR07506.1| labial-like protein [Schistosoma mansoni]
Length = 318
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%), Gaps = 3/49 (6%)
Query: 74 LLNN---SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
++NN SGRTNFT +QLTELEKEFHFN+YL+RARRIEIA+ L L ETQ
Sbjct: 120 IINNNSLSGRTNFTTRQLTELEKEFHFNRYLSRARRIEIAADLNLTETQ 168
>gi|148537257|dbj|BAF63519.1| LjHox1w homeobox [Lethenteron camtschaticum]
Length = 409
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNF+ KQLTELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 298 RTNFSTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQ 337
>gi|348522369|ref|XP_003448697.1| PREDICTED: homeobox protein Hox-B1b-like [Oreochromis niloticus]
Length = 286
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT KQLTELEKEFHFNKYL+RARR+E+A+ L+LNETQ
Sbjct: 202 RTNFTTKQLTELEKEFHFNKYLSRARRVEVAASLELNETQV 242
>gi|387232069|gb|AFJ72745.1| homeobox D1, partial [Rousettus leschenaultii]
Length = 73
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/41 (85%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 4 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 44
>gi|62958659|gb|AAY23652.1| Hox protein [Oreochromis niloticus]
Length = 100
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N RTNFT KQLTELEKEFHFNKYL+RARR+E+A+ L+LNETQ
Sbjct: 13 NVIRTNFTTKQLTELEKEFHFNKYLSRARRVEVAASLELNETQV 56
>gi|319919905|gb|ADV78453.1| homeodomain protein HoxB1b [Culter alburnus]
Length = 191
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNET 118
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNET
Sbjct: 153 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNET 191
>gi|297264383|ref|XP_001095080.2| PREDICTED: hypothetical protein LOC701064 [Macaca mulatta]
Length = 3029
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSG--------RTNFTNKQLTELE 92
G +P SP++ + ++ + +S L G RTNF+ KQLTELE
Sbjct: 2887 GTYPKSVSPASGLPAAFSTFEWMKVKRNASKKSKLAQYGTANPSSAIRTNFSTKQLTELE 2946
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQ 119
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 2947 KEFHFNKYLTRARRIEIANCLQLNDTQ 2973
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 1276 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 1315
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 2129 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 2168
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
GR ++ Q ELEKEF FN YLTR RRIE++ L L E Q
Sbjct: 541 GRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQ 581
>gi|193948|gb|AAA37850.1| Hox-2.9 homeobox protein, partial [Mus musculus]
Length = 61
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTNFT +QLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 5 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 45
>gi|291391794|ref|XP_002712254.1| PREDICTED: homeobox D3 [Oryctolagus cuniculus]
Length = 2096
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 8/87 (9%)
Query: 41 GVHPHPTSPSTDYTTPLTALKY-------PPSAALSQHQSLLNNSG-RTNFTNKQLTELE 92
G +P SP++ + ++ P + L+++ + +S RTNF+ KQLTELE
Sbjct: 1961 GAYPKSVSPASGLPAAFSTFEWMKVKRNAPKKSKLAEYGAASPSSTIRTNFSTKQLTELE 2020
Query: 93 KEFHFNKYLTRARRIEIASVLQLNETQ 119
KEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 2021 KEFHFNKYLTRARRIEIANCLQLNDTQ 2047
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 140 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 179
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 958 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 997
>gi|255661308|gb|ACU25810.1| homeobox protein B1b [Anguilla japonica]
Length = 59
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNF KQLTELEKEFHFNKYL+RARR+EIA+ L+LNETQ
Sbjct: 15 NTIRTNFPTKQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 58
>gi|319919899|gb|ADV78450.1| homeodomain protein HoxB1b [Hypophthalmichthys molitrix]
Length = 201
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 117
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LNE
Sbjct: 162 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNE 199
>gi|74267531|dbj|BAE44264.1| hoxB1a [Oryzias latipes]
Length = 391
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 44/59 (74%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
+ PP N++ RTNFT +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 272 RNPPKTVKVSDFGAHNSAMRTNFTTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 330
>gi|83016944|dbj|BAE53471.1| hoxB1a [Oryzias latipes]
Length = 394
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 44/59 (74%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
+ PP N++ RTNFT +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 275 RNPPKTVKVSDFGAHNSAMRTNFTTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 333
>gi|326454542|gb|ADZ74206.1| homeodomain protein HoxA1a [Culter alburnus]
Length = 276
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 39/44 (88%), Gaps = 1/44 (2%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIE-IASVLQLNETQ 119
N+ RTNFT KQLTELEKEFH NKYLTRARR+E IA+ LQLNETQ
Sbjct: 207 NTVRTNFTTKQLTELEKEFHSNKYLTRARRVEHIAAALQLNETQ 250
>gi|6981040|ref|NP_037207.1| homeobox protein Hox-A1 [Rattus norvegicus]
gi|6016290|sp|O08656.1|HXA1_RAT RecName: Full=Homeobox protein Hox-A1
gi|1929020|gb|AAB51399.1| homeobox-plus HoxA1 protein [Rattus norvegicus]
Length = 333
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+ RTNFT KQLTELEKEFHFNKYLTRAR EIA+ LQLNETQ
Sbjct: 229 NAVRTNFTTKQLTELEKEFHFNKYLTRARS-EIAASLQLNETQV 271
>gi|319919901|gb|ADV78451.1| homeodomain protein HoxB1b [Hypophthalmichthys nobilis]
Length = 200
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 117
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LN+
Sbjct: 162 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNQ 199
>gi|319919903|gb|ADV78452.1| homeodomain protein HoxB1b [Elopichthys bambusa]
Length = 200
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 37/39 (94%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNET 118
RTNFT KQLTELEKEFHFNKYLTRARR+E+A+ L+LN++
Sbjct: 161 RTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNKS 199
>gi|15422173|gb|AAK95824.1| labial [Pachymerium ferrugineum]
Length = 41
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 35/38 (92%)
Query: 83 FTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
F+ KQLTELEKEFH+NKYLTRARRIEIAS LQLNETQ
Sbjct: 1 FSTKQLTELEKEFHYNKYLTRARRIEIASALQLNETQV 38
>gi|18026294|gb|AAL25804.1| labial homeodomain protein [Euprymna scolopes]
Length = 56
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/35 (91%), Positives = 34/35 (97%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASV 112
+GRTNFTNKQLTELEKEFHFNKYLTRARRIEIA+
Sbjct: 22 TGRTNFTNKQLTELEKEFHFNKYLTRARRIEIAAA 56
>gi|348521584|ref|XP_003448306.1| PREDICTED: hypothetical protein LOC100710504 [Oreochromis
niloticus]
Length = 296
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 38/46 (82%)
Query: 75 LNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+N R +++ KQLTELEKEFHFNKYLTRARR+E+A LQL+ETQ
Sbjct: 207 VNGPPRISYSTKQLTELEKEFHFNKYLTRARRVEVAGALQLSETQV 252
>gi|58396723|gb|AAW72801.1| homeobox protein lab01, partial [Urechis unicinctus]
Length = 48
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 81 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
TNFTNKQLTELEKEFHF++YLTR+RRIEIA+ L LNETQ
Sbjct: 1 TNFTNKQLTELEKEFHFSRYLTRSRRIEIAASLGLNETQ 39
>gi|348585599|ref|XP_003478559.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D1-like [Cavia
porcellus]
Length = 468
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNF+ KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 373 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQ 412
>gi|123204442|gb|ABM73555.1| homeodomain protein [Megalobrama amblycephala]
Length = 71
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N RTNFT KQLTEL+K+FHFNKY TRAR +E+A+ L LNETQ
Sbjct: 13 NIIRTNFTTKQLTELDKDFHFNKYFTRARSVEVAATLDLNETQV 56
>gi|391340968|ref|XP_003744805.1| PREDICTED: uncharacterized protein LOC100898565 [Metaseiulus
occidentalis]
Length = 428
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/40 (90%), Positives = 37/40 (92%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RTNFT KQLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 312 RTNFTTKQLTELEKEFHFNKYLTRARRIEIATALTLNETQ 351
>gi|110555639|emb|CAJ56091.1| labial protein [Glomeris marginata]
Length = 73
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/35 (91%), Positives = 33/35 (94%)
Query: 86 KQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
KQLTELEKEFHFNKYLTRARRIEIA+ LQLNETQ
Sbjct: 2 KQLTELEKEFHFNKYLTRARRIEIATALQLNETQV 36
>gi|385654532|gb|AFI62026.1| Hox-D1a [Anguilla japonica]
Length = 294
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+ RT+FT KQLTELEKEFHFNKYLT+ RR+EIA L LNETQ
Sbjct: 200 TARTSFTTKQLTELEKEFHFNKYLTKTRRVEIAHNLHLNETQV 242
>gi|255742465|gb|ACU32578.1| homeobox protein HoxC1 [Callorhinchus milii]
Length = 291
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
R NF KQLTELEKEFHF++YL+RARR+EIAS L L+E+Q
Sbjct: 199 RINFNTKQLTELEKEFHFSRYLSRARRVEIASALSLHESQV 239
>gi|363743434|ref|XP_003642840.1| PREDICTED: homeobox protein Hox-B2 [Gallus gallus]
Length = 323
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Query: 63 PPSAALSQHQSLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNET 118
P + + + Q L ++SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 123 PAAGSPADTQGLADSSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTER 182
Query: 119 QT 120
Q
Sbjct: 183 QV 184
>gi|332692535|gb|AEE90210.1| Homeobox D1a [Anguilla anguilla]
Length = 296
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+ RT+FT KQLTELEKEFHFNKYL++ RR+EIA L LNETQ
Sbjct: 202 TARTSFTTKQLTELEKEFHFNKYLSKTRRVEIAHNLHLNETQV 244
>gi|410901721|ref|XP_003964344.1| PREDICTED: homeobox protein Hox-B1a-like [Takifugu rubripes]
gi|119370782|sp|Q1KKX5.1|HXB1A_FUGRU RecName: Full=Homeobox protein Hox-B1a
gi|94482801|gb|ABF22419.1| homeobox protein HoxB1a [Takifugu rubripes]
Length = 391
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N++ RTNF+ +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 286 NSAIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 329
>gi|2130554|gb|AAC60204.1| homeobox protein HOXB-1 [Takifugu rubripes]
Length = 391
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N++ RTNF+ +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 286 NSAIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 329
>gi|45772171|tpg|DAA05215.1| TPA_exp: Hoxb1a [Takifugu rubripes]
Length = 388
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N++ RTNF+ +QLTELEKEFHF+KYLTRARR+EIA+ L+LNETQ
Sbjct: 283 NSAIRTNFSTRQLTELEKEFHFSKYLTRARRVEIAATLELNETQ 326
>gi|291405875|ref|XP_002719362.1| PREDICTED: homeobox B2 [Oryctolagus cuniculus]
Length = 347
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 44 PHPTSPSTDYTTPLTALKYP--PSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYL 101
P P S + +PL+ P P A + L RT +TN QL ELEKEFHFNKYL
Sbjct: 109 PSPASSAVPAASPLSPADGPGLPEAGGGGARRL-----RTAYTNTQLLELEKEFHFNKYL 163
Query: 102 TRARRIEIASVLQLNETQT 120
R RR+EIA++L L E Q
Sbjct: 164 CRPRRVEIAALLDLTERQV 182
>gi|400180329|gb|AFP73297.1| Hoxa2alpha [Polyodon spathula]
Length = 365
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 12/81 (14%)
Query: 46 PTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSG------RTNFTNKQLTELEKEFHFNK 99
PTS +T +T AL +PP + +L+N G RT +TN QL ELEKEFHFNK
Sbjct: 104 PTSSATASST--EALCFPPKDS----PEILDNVGGGSRRLRTAYTNTQLLELEKEFHFNK 157
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL R RR+EIA++L L E Q
Sbjct: 158 YLCRPRRVEIAALLDLTERQV 178
>gi|393911492|gb|EJD76332.1| hypothetical protein LOAG_16680 [Loa loa]
Length = 239
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT QLTELEKE++ +KYL R RR EIAS+LQLNETQ
Sbjct: 129 NAMRTNFTTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQ 171
>gi|327280448|ref|XP_003224964.1| PREDICTED: homeobox protein Hox-A2-like isoform 1 [Anolis
carolinensis]
Length = 385
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 56 PLTALKYPPSAALSQHQSLL---NNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRI 107
P + P A LS +SL N SG RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 118 PAASASTPGPACLSHKESLEISENGSGASRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 177
Query: 108 EIASVLQLNETQT 120
EIA++L L E Q
Sbjct: 178 EIAALLDLTERQV 190
>gi|312086135|ref|XP_003144958.1| hypothetical protein LOAG_09382 [Loa loa]
Length = 202
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT QLTELEKE++ +KYL R RR EIAS+LQLNETQ
Sbjct: 129 NAMRTNFTTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQ 171
>gi|431890738|gb|ELK01617.1| Homeobox protein Hox-B2 [Pteropus alecto]
Length = 352
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 47 TSPSTDYTTPLTALKYPPSAALSQHQSLLNNSG------RTNFTNKQLTELEKEFHFNKY 100
TSP + P + + P + L +G RT +TN QL ELEKEFHFNKY
Sbjct: 111 TSPPAASSVPASGVGLP-----ADGSGLAEAAGSGARRLRTAYTNTQLLELEKEFHFNKY 165
Query: 101 LTRARRIEIASVLQLNETQT 120
L R RR+EIA++L L E Q
Sbjct: 166 LCRPRRVEIAALLDLTERQV 185
>gi|387232067|gb|AFJ72744.1| homeobox D1, partial [Hipposideros pomona]
Length = 68
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 33/35 (94%)
Query: 86 KQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
KQLTELEKEFHFNKYLTRARRIEIA+ LQLN+TQ
Sbjct: 2 KQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 36
>gi|170574016|ref|XP_001892637.1| Homeobox domain containing protein [Brugia malayi]
gi|158601687|gb|EDP38530.1| Homeobox domain containing protein [Brugia malayi]
Length = 186
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT QLTELEKE++ +KYL R RR EIAS+LQLNETQ
Sbjct: 133 NAIRTNFTTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQ 175
>gi|402589609|gb|EJW83541.1| homeobox domain-containing protein [Wuchereria bancrofti]
Length = 183
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N+ RTNFT QLTELEKE++ +KYL R RR EIAS+LQLNETQ
Sbjct: 133 NAIRTNFTTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQ 175
>gi|114053055|ref|NP_001040556.1| homeobox B2 [Rattus norvegicus]
gi|89475550|gb|ABD73307.1| androgen-dependent epididymal homeobox-like protein [Rattus
norvegicus]
Length = 305
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 131 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 171
>gi|332692502|gb|AEE90181.1| Homeobox B2b [Anguilla anguilla]
Length = 374
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Query: 69 SQHQSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
++ Q+ L+N G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 TEAQNGLDNGGSSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 193
>gi|301128878|emb|CBL59342.1| HoxA2 [Scyliorhinus canicula]
Length = 363
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 57 LTALKYPPSAALSQHQS--LLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIE 108
L A P ++ LSQ ++ + +N+G RT +TN QL ELEKEFHFNKYL R RR+E
Sbjct: 103 LPASSGPAASCLSQKETHEIPDNTGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVE 162
Query: 109 IASVLQLNETQT 120
IA++L L E Q
Sbjct: 163 IAALLDLTERQV 174
>gi|410980979|ref|XP_003996851.1| PREDICTED: homeobox protein Hox-B2, partial [Felis catus]
Length = 262
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 60 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 100
>gi|344285935|ref|XP_003414715.1| PREDICTED: homeobox protein Hox-B2-like [Loxodonta africana]
Length = 355
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 185
>gi|14916592|sp|Q9IA20.1|HXA2_HETFR RecName: Full=Homeobox protein Hox-A2
gi|7271829|gb|AAF44640.1|AF224262_2 HoxA2 [Heterodontus francisci]
Length = 363
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 57 LTALKYPPSAALSQHQS--LLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIE 108
L A P ++ LSQ ++ + +N+G RT +TN QL ELEKEFHFNKYL R RR+E
Sbjct: 103 LPASSGPAASCLSQKETHEIPDNTGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVE 162
Query: 109 IASVLQLNETQT 120
IA++L L E Q
Sbjct: 163 IAALLDLTERQV 174
>gi|355568479|gb|EHH24760.1| hypothetical protein EGK_08475 [Macaca mulatta]
Length = 356
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 PSTDYTTPLTALKYPPSAALSQHQSLLN-----NSG----RTNFTNKQLTELEKEFHFNK 99
PS T+P A P++ + L G RT +TN QL ELEKEFHFNK
Sbjct: 106 PSQSATSPSPAASAVPASGVGSPADGLGLPEAGGGGARRLRTAYTNTQLLELEKEFHFNK 165
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL R RR+EIA++L L E Q
Sbjct: 166 YLCRPRRVEIAALLDLTERQV 186
>gi|385654497|gb|AFI61995.1| Hox-B2b [Anguilla japonica]
Length = 374
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Query: 69 SQHQSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
++ Q+ L+N G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 TEAQNGLDNGGSSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 193
>gi|255755639|dbj|BAH96545.1| homeodomain transcription factor [Balanoglossus simodensis]
Length = 361
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT FTN QL ELEKEFH+N+YL R RRIEIAS+L+L+E Q
Sbjct: 114 RTAFTNTQLLELEKEFHYNRYLCRPRRIEIASMLELSERQV 154
>gi|311267488|ref|XP_003131594.1| PREDICTED: homeobox protein Hox-B2-like [Sus scrofa]
Length = 353
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 47 TSPSTDYTTPLTALKYP------PSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKY 100
TSP+ ++ + + P P AA + L RT +TN QL ELEKEFHFNKY
Sbjct: 111 TSPTAAFSVLASGVGSPADGPGLPEAAGGGARRL-----RTAYTNTQLLELEKEFHFNKY 165
Query: 101 LTRARRIEIASVLQLNETQT 120
L R RR+EIA++L L E Q
Sbjct: 166 LCRPRRVEIAALLDLTERQV 185
>gi|194217065|ref|XP_001917673.1| PREDICTED: homeobox protein Hox-B2-like [Equus caballus]
Length = 273
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 11/80 (13%)
Query: 47 TSPSTDYTTPLTALKYP------PSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKY 100
TSP + P + + P P AA + L RT +TN QL ELEKEFHFNKY
Sbjct: 114 TSPPAASSLPASGVGSPADGPAVPEAAGGGARRL-----RTAYTNTQLLELEKEFHFNKY 168
Query: 101 LTRARRIEIASVLQLNETQT 120
L R RR+EIA++L L E Q
Sbjct: 169 LCRPRRVEIAALLDLTERQV 188
>gi|4504465|ref|NP_002136.1| homeobox protein Hox-B2 [Homo sapiens]
gi|123270|sp|P14652.1|HXB2_HUMAN RecName: Full=Homeobox protein Hox-B2; AltName: Full=Homeobox
protein Hox-2.8; AltName: Full=Homeobox protein Hox-2H;
AltName: Full=K8
gi|32382|emb|CAA34655.1| unnamed protein product [Homo sapiens]
gi|49901881|gb|AAH74805.1| Homeobox B2 [Homo sapiens]
gi|49902074|gb|AAH74806.1| Homeobox B2 [Homo sapiens]
gi|119615149|gb|EAW94743.1| homeobox B2, isoform CRA_a [Homo sapiens]
gi|167773151|gb|ABZ92010.1| homeobox B2 [synthetic construct]
Length = 356
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 PSTDYTTPLTALKYPPSAALSQHQSLLN-----NSG----RTNFTNKQLTELEKEFHFNK 99
PS T+P A P++ + L G RT +TN QL ELEKEFHFNK
Sbjct: 107 PSQSATSPSPAASAVPASGVGSPADGLGLPEAGGGGARRLRTAYTNTQLLELEKEFHFNK 166
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL R RR+EIA++L L E Q
Sbjct: 167 YLCRPRRVEIAALLDLTERQV 187
>gi|332259409|ref|XP_003278781.1| PREDICTED: homeobox protein Hox-B2 [Nomascus leucogenys]
Length = 356
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 49 PSTDYTTPLTALKYPPSAALSQHQS--LLNNSG-------RTNFTNKQLTELEKEFHFNK 99
PS T+P A P++ + +L +G RT +TN QL ELEKEFHFNK
Sbjct: 107 PSQSATSPSPAASAVPASGVGSPADGLVLPEAGGGGARRLRTAYTNTQLLELEKEFHFNK 166
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL R RR+EIA++L L E Q
Sbjct: 167 YLCRPRRVEIAALLDLTERQV 187
>gi|73966230|ref|XP_851108.1| PREDICTED: homeobox protein Hox-B2 [Canis lupus familiaris]
Length = 342
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 63 PPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
PP AA + L RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 131 PPEAAGGGARRL-----RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 183
>gi|397514556|ref|XP_003827547.1| PREDICTED: homeobox protein Hox-B2 [Pan paniscus]
Length = 356
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|395756599|ref|XP_003780150.1| PREDICTED: homeobox protein Hox-B2 [Pongo abelii]
Length = 356
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|410259446|gb|JAA17689.1| homeobox B2 [Pan troglodytes]
Length = 356
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 PSTDYTTPLTALKYPPSAALSQHQSLLN-----NSG----RTNFTNKQLTELEKEFHFNK 99
PS T+P A P++ + L G RT +TN QL ELEKEFHFNK
Sbjct: 107 PSQSATSPSPAASAVPASGVGSPADGLGLPEAGGGGARRLRTAYTNTQLLELEKEFHFNK 166
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL R RR+EIA++L L E Q
Sbjct: 167 YLCRPRRVEIAALLDLTERQV 187
>gi|226822846|gb|ACO83081.1| homeobox A2 (predicted) [Dasypus novemcinctus]
Length = 373
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 47/83 (56%), Gaps = 17/83 (20%)
Query: 46 PTSPSTDYTTPLTALKYPPSAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHF 97
P S ST T P A LS +SL + SG RT +TN QL ELEKEFHF
Sbjct: 111 PASASTATTGP---------ACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHF 161
Query: 98 NKYLTRARRIEIASVLQLNETQT 120
NKYL R RR+EIA++L L E Q
Sbjct: 162 NKYLCRPRRVEIAALLDLTERQV 184
>gi|114666362|ref|XP_001173066.1| PREDICTED: homeobox protein Hox-B2 [Pan troglodytes]
gi|410218434|gb|JAA06436.1| homeobox B2 [Pan troglodytes]
gi|410287716|gb|JAA22458.1| homeobox B2 [Pan troglodytes]
gi|410337653|gb|JAA37773.1| homeobox B2 [Pan troglodytes]
Length = 356
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|123204446|gb|ABM73556.1| homeodomain protein [Megalobrama amblycephala]
Length = 392
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 73 SLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
L N SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 151 GLDNGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 201
>gi|313236407|emb|CBY11724.1| unnamed protein product [Oikopleura dioica]
Length = 231
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIAS+L L E Q
Sbjct: 13 RTAYTNTQLIELEKEFHFNKYLCRPRRIEIASMLDLTERQV 53
>gi|359754104|gb|AEV59526.1| HOXB2 [Macropus eugenii]
Length = 364
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 63 PPSAALSQHQSLLNNSG-------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQL 115
P S A S L + G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 123 PASGAGSPDAPGLQDGGGSGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDL 182
Query: 116 NETQT 120
E Q
Sbjct: 183 TERQV 187
>gi|165873657|gb|ABY67953.1| proboscipedia hox protein [Capitella teleta]
Length = 238
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 58 TALKYPPSAALSQHQSLLNNSGR---TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQ 114
+ + PP++ + S+ +N R T +TN QL ELEKEFHFNKYL R RRIEIA+ L
Sbjct: 105 SGVAPPPTSCGNTGSSVASNHPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLD 164
Query: 115 LNETQT 120
L E Q
Sbjct: 165 LTERQV 170
>gi|400180342|gb|AFP73309.1| Hoxa2beta [Polyodon spathula]
Length = 365
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 12/81 (14%)
Query: 46 PTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSG------RTNFTNKQLTELEKEFHFNK 99
PTS +T +T L +PP + +L+N G RT +TN QL ELEKEFHFNK
Sbjct: 104 PTSSATASST--EPLCFPPKDS----PEILDNVGGGSRRLRTAYTNTQLLELEKEFHFNK 157
Query: 100 YLTRARRIEIASVLQLNETQT 120
YL R RR+EIA++L L E Q
Sbjct: 158 YLCRPRRVEIAALLDLTERQV 178
>gi|326486607|gb|ADZ76361.1| homeodomain protein HoxA2b [Ctenopharyngodon idella]
Length = 209
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 47 TSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 106
T+ STD + PL L P S +S S RT +TN QL ELEKEFHFNKYL R RR
Sbjct: 11 TTTSTD-SGPLY-LSPPGSPEISDGGSGATRRLRTAYTNTQLLELEKEFHFNKYLCRPRR 68
Query: 107 IEIASVLQLNETQT 120
+EIA++L L E Q
Sbjct: 69 VEIAALLDLTERQV 82
>gi|403279479|ref|XP_003931277.1| PREDICTED: homeobox protein Hox-B2 [Saimiri boliviensis
boliviensis]
Length = 353
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186
>gi|296202591|ref|XP_002748521.1| PREDICTED: homeobox protein Hox-B2 [Callithrix jacchus]
Length = 356
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186
>gi|313244923|emb|CBY42438.1| unnamed protein product [Oikopleura dioica]
Length = 171
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIAS+L L E Q
Sbjct: 34 RTAYTNTQLIELEKEFHFNKYLCRPRRIEIASMLDLTERQV 74
>gi|296488402|tpg|DAA30515.1| TPA: homeobox protein Hox-A2 [Bos taurus]
gi|440899271|gb|ELR50600.1| Homeobox protein Hox-A2 [Bos grunniens mutus]
Length = 372
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 56 PLTALKYPPSAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRI 107
P +A A LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 111 PASAASATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 170
Query: 108 EIASVLQLNETQT 120
EIA++L L E Q
Sbjct: 171 EIAALLDLTERQV 183
>gi|440910527|gb|ELR60321.1| Homeobox protein Hox-B2 [Bos grunniens mutus]
Length = 354
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|115494928|ref|NP_001069322.1| homeobox protein Hox-A2 [Bos taurus]
gi|122145592|sp|Q0VCS4.1|HXA2_BOVIN RecName: Full=Homeobox protein Hox-A2
gi|111307024|gb|AAI20031.1| Homeobox A2 [Bos taurus]
Length = 372
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 56 PLTALKYPPSAALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRI 107
P +A A LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+
Sbjct: 111 PASAASATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRV 170
Query: 108 EIASVLQLNETQT 120
EIA++L L E Q
Sbjct: 171 EIAALLDLTERQV 183
>gi|293340385|ref|XP_002724587.1| PREDICTED: homeobox protein Hox-B2 [Rattus norvegicus]
gi|293351796|ref|XP_002727852.1| PREDICTED: homeobox protein Hox-B2 [Rattus norvegicus]
gi|149053989|gb|EDM05806.1| homeo box B2 (predicted) [Rattus norvegicus]
Length = 355
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186
>gi|300797668|ref|NP_001178264.1| homeobox protein Hox-B2 [Bos taurus]
gi|296476536|tpg|DAA18651.1| TPA: homeobox B2-like [Bos taurus]
Length = 354
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|432908473|ref|XP_004077878.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A2b-like
[Oryzias latipes]
Length = 344
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 62 YPPSAALSQHQSLLNNSG---RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNET 118
+PP + + +S + + RT +TN QL ELEKEFHFNKYL R RR+EIA++L L+E
Sbjct: 119 FPPQGSPEEPESTDDGASKRLRTAYTNNQLLELEKEFHFNKYLCRPRRVEIAALLDLSEK 178
Query: 119 QT 120
Q
Sbjct: 179 QV 180
>gi|395826610|ref|XP_003786510.1| PREDICTED: homeobox protein Hox-B2 [Otolemur garnettii]
Length = 356
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186
>gi|351713527|gb|EHB16446.1| Homeobox protein Hox-B2 [Heterocephalus glaber]
Length = 353
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|324517390|gb|ADY46808.1| Homeobox protein ceh-13 [Ascaris suum]
Length = 184
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 77 NSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N RTNF+ QLTELEKE++ +KYL R RR EIAS+LQLNETQ
Sbjct: 90 NVNRTNFSTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQ 132
>gi|254212180|gb|ACT65755.1| Hoxa2 [Leucoraja erinacea]
Length = 363
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 57 LTALKYPPSAALSQHQS--LLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIE 108
L A P + LSQ ++ + +N+G RT +TN QL ELEKEFHFNKYL R RR+E
Sbjct: 103 LPASCGPAESCLSQKETHEIPDNTGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVE 162
Query: 109 IASVLQLNETQT 120
IA++L L E Q
Sbjct: 163 IAALLDLTERQV 174
>gi|355695010|gb|AER99864.1| homeobox B2 [Mustela putorius furo]
Length = 169
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Query: 64 PSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
P AA S + L RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 75 PEAAGSGARRL-----RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 126
>gi|297522136|gb|ADI44337.1| labial protein [Euperipatoides kanangrensis]
Length = 228
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/31 (93%), Positives = 30/31 (96%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARR 106
NN+GRTNFT KQLTELEKEFHFNKYLTRARR
Sbjct: 198 NNAGRTNFTTKQLTELEKEFHFNKYLTRARR 228
>gi|354474772|ref|XP_003499604.1| PREDICTED: homeobox protein Hox-B2-like [Cricetulus griseus]
Length = 354
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|426355734|ref|XP_004045263.1| PREDICTED: homeobox protein Hox-A2 [Gorilla gorilla gorilla]
Length = 368
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 41/63 (65%), Gaps = 8/63 (12%)
Query: 66 AALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 117
A LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 117 ACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 176
Query: 118 TQT 120
Q
Sbjct: 177 RQV 179
>gi|291360356|gb|ADD97671.1| homeobox B2 [Monodelphis domestica]
Length = 163
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 1 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 41
>gi|156181762|gb|ABU55073.1| Hoxb2a [Oreochromis niloticus]
Length = 180
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
Query: 72 QSLLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
Q+ L+ G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 79 QAGLDAGGAGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 133
>gi|94158904|ref|NP_598793.2| homeobox protein Hox-B2 [Mus musculus]
gi|114149319|sp|P0C1T1.1|HXB2_MOUSE RecName: Full=Homeobox protein Hox-B2; AltName: Full=Homeobox
protein Hox-2.8
gi|223459934|gb|AAI38496.1| Homeo box B2 [Mus musculus]
gi|223460298|gb|AAI38495.1| Homeo box B2 [Mus musculus]
Length = 354
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 185
>gi|255742442|gb|ACU32556.1| homeobox protein HoxB2 [Callorhinchus milii]
Length = 362
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Query: 71 HQSLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H N+SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 128 HSDQDNSSGCRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 181
>gi|154183800|gb|ABS70742.1| Hoxa2b [Haplochromis burtoni]
Length = 362
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 50 STDYTTPLTALKYPPSAALSQHQSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRA 104
+TD ++PL + P + +S + G RT +TN QL ELEKEFHFNKYL R
Sbjct: 121 TTDDSSPL---YFSPQGSPDTPESGAGDGGPSRRLRTAYTNTQLLELEKEFHFNKYLCRP 177
Query: 105 RRIEIASVLQLNETQT 120
RR+EIA++L L E Q
Sbjct: 178 RRVEIAALLDLTEKQV 193
>gi|281182580|ref|NP_001162366.1| homeobox protein Hox-A2 [Papio anubis]
gi|189044223|sp|A9L937.1|HXA2_PAPAN RecName: Full=Homeobox protein Hox-A2
gi|160904216|gb|ABX52200.1| homeobox A2 (predicted) [Papio anubis]
Length = 377
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 41/63 (65%), Gaps = 8/63 (12%)
Query: 66 AALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 117
A LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 126 ACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 185
Query: 118 TQT 120
Q
Sbjct: 186 RQV 188
>gi|147905886|ref|NP_001079219.1| homeobox A2 [Xenopus laevis]
gi|11119121|gb|AAG30509.1|AF307009_1 transcription factor Hoxa2b [Xenopus laevis]
gi|213623408|gb|AAI69703.1| Transcription factor Hoxa2b [Xenopus laevis]
gi|213625046|gb|AAI69701.1| Transcription factor Hoxa2b [Xenopus laevis]
Length = 375
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 9/67 (13%)
Query: 63 PPSAALSQHQSLL---NNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVL 113
P + A H+ ++ +NSG RT +TN QL ELEKEFHFNKYL R RR+EIA++L
Sbjct: 119 PVTTACLSHKEIIEIQDNSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALL 178
Query: 114 QLNETQT 120
L E Q
Sbjct: 179 DLTERQV 185
>gi|385654483|gb|AFI61984.1| Hox-B2a [Anguilla japonica]
Length = 377
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 140 QSGPDNGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 192
>gi|311275748|ref|XP_003134891.1| PREDICTED: homeobox protein Hox-A2-like [Sus scrofa]
Length = 380
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 41/63 (65%), Gaps = 8/63 (12%)
Query: 66 AALSQHQSL--LNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 117
A LS +SL + SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 129 ACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 188
Query: 118 TQT 120
Q
Sbjct: 189 RQV 191
>gi|327280450|ref|XP_003224965.1| PREDICTED: homeobox protein Hox-A2-like isoform 2 [Anolis
carolinensis]
Length = 393
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
Query: 76 NNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 149 NGSGASRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 198
>gi|332692492|gb|AEE90172.1| Homeobox B2a [Anguilla anguilla]
Length = 377
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N G RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 140 QSGPDNGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 192
>gi|126308351|ref|XP_001372942.1| PREDICTED: homeobox protein Hox-B2 [Monodelphis domestica]
Length = 365
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 149 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 189
>gi|387625229|gb|AFJ94201.1| Hox3 homeobox protein, partial [Pristina longiseta]
Length = 296
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 65 SAALSQHQSLLNNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNET 118
+ ++ H + G RT +T+ QL ELEKEFH+N+YL R RRIE+AS+L L+E
Sbjct: 227 AGGMAGHTGAVGAGGPGSKRARTAYTSAQLVELEKEFHYNRYLCRPRRIELASLLNLSER 286
Query: 119 Q 119
Q
Sbjct: 287 Q 287
>gi|18858833|ref|NP_571191.1| homeobox protein Hox-B2a [Danio rerio]
gi|60392403|sp|O42367.2|HXB2A_DANRE RecName: Full=Homeobox protein Hox-B2a; Short=Hox-B2
gi|3420297|gb|AAD03832.1| homeobox transcription factor [Danio rerio]
gi|26984640|emb|CAD59117.1| SI:dZ254O17.7 (homeo box protein B2a) [Danio rerio]
gi|41944544|gb|AAH65967.1| Homeo box B2a [Danio rerio]
Length = 390
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 73 SLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
L N SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 151 GLDNVSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 201
>gi|6015517|emb|CAB57800.1| OX2.7 [Gallus gallus]
Length = 96
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 10/73 (13%)
Query: 47 TSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 106
+SPST+ + K PP ++ S+ RT +T+ QL ELEKEFHFN+YL R RR
Sbjct: 13 SSPSTE---TCSGEKTPPGSSASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRR 62
Query: 107 IEIASVLQLNETQ 119
+E+A++L L+E Q
Sbjct: 63 VEMANLLNLSERQ 75
>gi|187438866|gb|ACD10895.1| Hoxb2a [Oryzias latipes]
Length = 206
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 1 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 41
>gi|47229433|emb|CAF99421.1| unnamed protein product [Tetraodon nigroviridis]
Length = 850
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 628 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 668
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 344 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 395
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q ELEKEFHFN+YLTR RR+EIA + L+E Q
Sbjct: 151 RTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQ 190
>gi|326486617|gb|ADZ76366.1| homeodomain protein HoxA2b [Culter alburnus]
Length = 278
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 111 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 151
>gi|348517823|ref|XP_003446432.1| PREDICTED: homeobox protein Hox-B2a [Oreochromis niloticus]
Length = 436
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 179 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 218
>gi|326486605|gb|ADZ76360.1| homeodomain protein HoxA2b [Mylopharyngodon piceus]
Length = 272
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 105 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 145
>gi|426238976|ref|XP_004013412.1| PREDICTED: homeobox protein Hox-B2 [Ovis aries]
Length = 277
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 59 ALKYPPSAALSQHQSLLNNSG----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQ 114
+ P LS H G RT +TN QL ELEKEFHFNKYL R RR+EIA++L
Sbjct: 111 GVGSPAGRPLSPHLPGAAGGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLD 170
Query: 115 LNETQT 120
L E Q
Sbjct: 171 LTERQV 176
>gi|226446767|gb|ACO58663.1| homeobox b2a [Oreochromis niloticus]
Length = 436
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 179 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQ 218
>gi|326486619|gb|ADZ76367.1| homeodomain protein HoxA2b [Opsariichthys bidens]
Length = 264
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 106 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 146
>gi|385654463|gb|AFI61966.1| Hox-A2a [Anguilla japonica]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 138 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 178
>gi|156181760|gb|ABU55072.1| Hoxa2b, partial [Oreochromis niloticus]
Length = 213
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 60 LKYPPSAALSQHQSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQ 114
L + P + +S + G RT +TN QL ELEKEFHFNKYL R RR+EIA++L
Sbjct: 103 LYFSPQGSPDTPESGAGDGGSSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLD 162
Query: 115 LNETQT 120
L E Q
Sbjct: 163 LTEKQV 168
>gi|45775268|gb|AAS77231.1| transcription factor Hox2 [Lethenteron camtschaticum]
Length = 394
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 161 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 201
>gi|73913460|gb|AAZ91665.1| HoxA2a [Morone saxatilis]
Length = 179
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 124 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 164
>gi|326486609|gb|ADZ76362.1| homeodomain protein HoxA2b [Hypophthalmichthys molitrix]
Length = 268
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 105 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 145
>gi|429510498|gb|AFZ94987.1| transcription factor Hox2 [Petromyzon marinus]
Length = 385
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 155 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 195
>gi|332692463|gb|AEE90146.1| Homeobox A2a [Anguilla anguilla]
Length = 366
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 138 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 178
>gi|71897468|gb|AAZ52558.1| transcription factor Hoxb2 [Xenopus laevis]
Length = 165
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 50 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 90
>gi|387598532|gb|AFJ91922.1| homeodomain transcription factor 2 [Platynereis dumerilii]
Length = 405
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 132 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 172
>gi|62958642|gb|AAY23647.1| Hox protein [Oreochromis niloticus]
Length = 276
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 19 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 59
>gi|220898190|gb|ACL81445.1| HoxB2 [Latimeria menadoensis]
Length = 362
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 69 SQHQSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
++ Q L +NS RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 126 TEAQGLQDNSNGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 182
>gi|410911098|ref|XP_003969027.1| PREDICTED: homeobox protein Hox-A2a-like [Takifugu rubripes]
gi|119370770|sp|Q1KL11.1|HXA2A_FUGRU RecName: Full=Homeobox protein Hox-A2a
gi|94482763|gb|ABF22383.1| homeobox protein HoxA2a [Takifugu rubripes]
Length = 363
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 181
>gi|148274182|gb|ABF18546.2| homeobox A2x [Fundulus heteroclitus]
Length = 329
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 175
>gi|148223968|ref|NP_001083876.1| homeobox A2 [Xenopus laevis]
gi|11119119|gb|AAG30508.1|AF307008_1 transcription factor Hoxa2 [Xenopus laevis]
gi|114108099|gb|AAI23245.1| Hoxa2 protein [Xenopus laevis]
Length = 369
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 6/51 (11%)
Query: 76 NNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+NSG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 132 DNSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 182
>gi|74267521|dbj|BAE44259.1| hoxA2b [Oryzias latipes]
gi|83016940|dbj|BAE53470.1| hoxA2b [Oryzias latipes]
Length = 347
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 33/41 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L+E Q
Sbjct: 143 RTAYTNNQLLELEKEFHFNKYLCRPRRVEIAALLDLSEKQV 183
>gi|156181758|gb|ABU55071.1| Hoxa2a, partial [Oreochromis niloticus]
Length = 179
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 124 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 164
>gi|119370771|sp|Q1KKZ2.1|HXA2B_FUGRU RecName: Full=Homeobox protein Hox-A2b
gi|94482783|gb|ABF22402.1| homeobox protein HoxA2b [Takifugu rubripes]
Length = 300
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 29 TKVQIPSELSPLGVHP--HPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNK 86
T + P E + +G++P HP + ++P A+ P S+ RT +TN
Sbjct: 47 TLIPPPFEQTVIGLNPGTHPRHSRSKQSSP-EAIDVGPGGGTSRRL-------RTAYTNT 98
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 99 QLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 132
>gi|94410828|gb|ABF18547.1| homeobox A2x [Fundulus majalis]
Length = 329
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 175
>gi|148966922|gb|ABR19892.1| homeobox a2x [Fundulus majalis]
Length = 329
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 175
>gi|148927422|gb|ABR19830.1| homeobox a2x [Fundulus heteroclitus]
Length = 329
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 135 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 175
>gi|317416904|emb|CBI12491.1| Mgox Lab homeobox protein [Mytilus edulis]
Length = 33
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 31/33 (93%)
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QLTELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 1 QLTELEKEFHFNKYLTRARRIEIAASLGLNETQ 33
>gi|220898204|gb|ACL81458.1| HoxC3 [Latimeria menadoensis]
Length = 391
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +TN QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 167 RTAYTNAQLVELEKEFHFNRYLCRPRRVEMANILNLSERQ 206
>gi|395532694|ref|XP_003768403.1| PREDICTED: homeobox protein Hox-B2 [Sarcophilus harrisii]
Length = 364
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 149 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 189
>gi|123204398|gb|ABM73544.1| homeodomain protein [Megalobrama amblycephala]
Length = 360
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 177
>gi|301762926|ref|XP_002916867.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B2a-like
[Ailuropoda melanoleuca]
Length = 302
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 117
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 142 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 179
>gi|348522885|ref|XP_003448954.1| PREDICTED: homeobox protein Hox-A2a [Oreochromis niloticus]
Length = 363
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 185
>gi|301617255|ref|XP_002938064.1| PREDICTED: homeobox protein Hox-B2a isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 340
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 177
>gi|154183827|gb|ABS70767.1| Hoxa2a [Haplochromis burtoni]
Length = 358
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 140 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 180
>gi|126341825|ref|XP_001362994.1| PREDICTED: homeobox protein Hox-A2 [Monodelphis domestica]
Length = 377
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 8/63 (12%)
Query: 66 AALSQHQSL---LNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 117
A L+ +SL N+SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 127 ACLNHKESLEIADNSSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 186
Query: 118 TQT 120
Q
Sbjct: 187 RQV 189
>gi|6110592|gb|AAF03888.1|AF187068_1 proboscipedia ortholog [Tribolium castaneum]
Length = 477
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 139 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 179
>gi|432881685|ref|XP_004073901.1| PREDICTED: homeobox protein Hox-A2a isoform 1 [Oryzias latipes]
gi|74267503|dbj|BAE44250.1| hoxA2a [Oryzias latipes]
gi|83016932|dbj|BAE53464.1| hoxA2a [Oryzias latipes]
Length = 359
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 181
>gi|328778406|ref|XP_394125.4| PREDICTED: hypothetical protein LOC410648 [Apis mellifera]
Length = 682
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 15 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 55
>gi|34304655|gb|AAQ63433.1| Hox2 [Oikopleura dioica]
Length = 60
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIAS+L L E Q
Sbjct: 5 RTAYTNTQLIELEKEFHFNKYLCRPRRIEIASMLDLTERQV 45
>gi|345323593|ref|XP_003430727.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A2-like
[Ornithorhynchus anatinus]
Length = 374
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 6/51 (11%)
Query: 76 NNSG------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
+NSG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 134 DNSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|326486611|gb|ADZ76363.1| homeodomain protein HoxA2b [Squaliobarbus curriculus]
Length = 219
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 92 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 132
>gi|74144156|dbj|BAE22163.1| unnamed protein product [Mus musculus]
Length = 317
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 88 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 128
>gi|326486615|gb|ADZ76365.1| homeodomain protein HoxA2b [Xenocypris argentea]
Length = 240
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 111 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 151
>gi|301617257|ref|XP_002938065.1| PREDICTED: homeobox protein Hox-B2a isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 348
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 185
>gi|158702228|gb|ABW77445.1| homeobox protein HoxA2aa [Salmo salar]
Length = 377
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 181
>gi|88604708|gb|ABD46725.1| homeobox protein proboscipedia [Nymphon gracile]
Length = 187
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L+L E Q
Sbjct: 16 RTAYTNNQLLELEKEFHFNKYLCRPRRIEIAASLELTERQV 56
>gi|332692480|gb|AEE90161.1| Homeobox A2b [Anguilla anguilla]
gi|385654471|gb|AFI61973.1| Hox-A2b [Anguilla japonica]
Length = 364
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 138 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 178
>gi|213514452|ref|NP_001135097.1| homeobox protein HoxA2ab [Salmo salar]
gi|157816069|gb|ABV82053.1| homeobox protein HoxA2ab [Salmo salar]
gi|158702248|gb|ABW77455.1| homeobox protein HoxA2ab [Salmo salar]
Length = 373
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 138 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 178
>gi|195947350|ref|NP_001124326.1| homeobox protein HoxA2aa [Salmo salar]
gi|157816049|gb|ABV82043.1| homeobox protein HoxA2aa [Salmo salar]
Length = 377
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 181
>gi|327275881|ref|XP_003222700.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B2-like
[Anolis carolinensis]
Length = 376
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 168 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 208
>gi|326486613|gb|ADZ76364.1| homeodomain protein HoxA2b [Elopichthys bambusa]
Length = 239
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 104 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 144
>gi|395540878|ref|XP_003772377.1| PREDICTED: homeobox protein Hox-A1-like [Sarcophilus harrisii]
Length = 116
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 11/80 (13%)
Query: 42 VHPHPTS-PSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKY 100
+ P PT+ P D ++ P +AA + S RT+F+ KQLTELEKEFH Y
Sbjct: 3 LWPGPTAKPGGDSSS-----GEPEAAAATAM-----GSPRTSFSTKQLTELEKEFHLQHY 52
Query: 101 LTRARRIEIASVLQLNETQT 120
L RARR E+AS LQ++ETQ
Sbjct: 53 LPRARRAEMASALQISETQV 72
>gi|399985|sp|P31246.1|HXA2_RAT RecName: Full=Homeobox protein Hox-A2; AltName: Full=Homeobox
protein Hox-1.11
gi|204642|gb|AAA67846.1| homeobox protein [Rattus norvegicus]
gi|262016|gb|AAB24560.1| Hox 1.11=homeobox transcription factor [rats, aortic smooth
muscles, Peptide, 372 aa]
Length = 372
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 143 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 183
>gi|18858825|ref|NP_571181.1| homeobox protein Hox-A2b [Danio rerio]
gi|60392401|sp|O42365.2|HXA2B_DANRE RecName: Full=Homeobox protein Hox-A2b; Short=Hox-A2
gi|11119123|gb|AAG30510.1|AF307010_1 transcription factor Hoxa2 [Danio rerio]
gi|26984643|emb|CAD59108.1| homeo box protein A2b [Danio rerio]
gi|190339418|gb|AAI62328.1| Homeo box A2b [Danio rerio]
Length = 363
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 177
>gi|350410204|ref|XP_003488979.1| PREDICTED: hypothetical protein LOC100748643 [Bombus impatiens]
Length = 635
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 31/40 (77%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 31 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 70
>gi|10140847|ref|NP_006726.1| homeobox protein Hox-A2 [Homo sapiens]
gi|114612520|ref|XP_527697.2| PREDICTED: homeobox protein Hox-A2 [Pan troglodytes]
gi|6016292|sp|O43364.1|HXA2_HUMAN RecName: Full=Homeobox protein Hox-A2; AltName: Full=Homeobox
protein Hox-1K
gi|41350072|gb|AAS00375.1| unknown [Homo sapiens]
gi|51094983|gb|EAL24227.1| homeo box A2 [Homo sapiens]
gi|119614270|gb|EAW93864.1| homeobox A2 [Homo sapiens]
gi|120660272|gb|AAI30572.1| Homeobox A2 [Homo sapiens]
gi|187952389|gb|AAI36501.1| Homeobox A2 [Homo sapiens]
gi|208968493|dbj|BAG74085.1| homeobox A2 [synthetic construct]
gi|410256616|gb|JAA16275.1| homeobox A2 [Pan troglodytes]
Length = 376
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|166063962|ref|NP_036713.2| homeobox protein Hox-A2 [Rattus norvegicus]
gi|392356109|ref|XP_003752225.1| PREDICTED: homeobox protein Hox-A2-like [Rattus norvegicus]
gi|149033365|gb|EDL88166.1| homeo box A2 [Rattus norvegicus]
Length = 372
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 143 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 183
>gi|6754230|ref|NP_034581.1| homeobox protein Hox-A2 [Mus musculus]
gi|399983|sp|P31245.1|HXA2_MOUSE RecName: Full=Homeobox protein Hox-A2; AltName: Full=Homeobox
protein Hox-1.11; Short=Hox1.11
gi|193898|gb|AAA37827.1| homeobox-containing protein [Mus musculus]
gi|193911|gb|AAA37835.1| homeobox protein [Mus musculus]
gi|193913|gb|AAA37836.1| homeobox protein [Mus musculus]
gi|109733225|gb|AAI17108.1| Homeo box A2 [Mus musculus]
gi|109733995|gb|AAI17106.1| Homeo box A2 [Mus musculus]
gi|148666233|gb|EDK98649.1| homeobox A2 [Mus musculus]
Length = 372
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 143 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 183
>gi|190339416|gb|AAI62323.1| Homeo box A2b [Danio rerio]
Length = 363
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 177
>gi|133740634|emb|CAL91855.1| proboscipedia [Cupiennius salei]
Length = 153
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 25 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 65
>gi|426227778|ref|XP_004007992.1| PREDICTED: homeobox protein Hox-A2 [Ovis aries]
Length = 362
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 133 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 173
>gi|357617807|gb|EHJ71004.1| maxillopedia [Danaus plexippus]
Length = 548
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 59 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 99
>gi|340727745|ref|XP_003402197.1| PREDICTED: hypothetical protein LOC100643103 [Bombus terrestris]
Length = 640
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 31/40 (77%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 39 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 78
>gi|332242644|ref|XP_003270493.1| PREDICTED: homeobox protein Hox-A2 [Nomascus leucogenys]
Length = 376
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|330901919|gb|AEC48467.1| homeobox protein A1 [Protopterus annectens]
gi|330901936|gb|AEC48473.1| homeobox protein A1 [Gymnopis multiplicata]
gi|330901938|gb|AEC48474.1| homeobox protein A1 [Typhlonectes natans]
Length = 34
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 1 TELEKEFHFNKYLTRARRVEIAAALQLNETQV 32
>gi|149705642|ref|XP_001499478.1| PREDICTED: homeobox protein Hox-A2-like [Equus caballus]
Length = 373
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|48476635|gb|AAT44520.1| proboscipedia [Oncopeltus fasciatus]
Length = 470
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 13 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 53
>gi|73913462|gb|AAZ91666.1| HoxA2b, partial [Morone saxatilis]
Length = 184
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 131 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 171
>gi|190576597|gb|ACE79085.1| homeobox A2 (predicted) [Sorex araneus]
Length = 375
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186
>gi|170649675|gb|ACB21260.1| homeobox A2 (predicted) [Callicebus moloch]
Length = 375
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186
>gi|431909011|gb|ELK12602.1| Homeobox protein Hox-A2 [Pteropus alecto]
Length = 373
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|297680796|ref|XP_002818153.1| PREDICTED: homeobox protein Hox-A2 [Pongo abelii]
Length = 374
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 185
>gi|301754121|ref|XP_002912902.1| PREDICTED: homeobox protein Hox-A2-like [Ailuropoda melanoleuca]
gi|281349543|gb|EFB25127.1| hypothetical protein PANDA_000663 [Ailuropoda melanoleuca]
Length = 376
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|359754093|gb|AEV59516.1| HOXA2 [Macropus eugenii]
Length = 373
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 8/63 (12%)
Query: 66 AALSQHQSL---LNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNE 117
A L+ +SL N+SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E
Sbjct: 129 ACLNHKESLEIADNSSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTE 188
Query: 118 TQT 120
Q
Sbjct: 189 RQV 191
>gi|296209387|ref|XP_002751500.1| PREDICTED: homeobox protein Hox-A2 [Callithrix jacchus]
gi|189044222|sp|B0VXK3.1|HXA2_CALJA RecName: Full=Homeobox protein Hox-A2
gi|167427225|gb|ABZ80206.1| homeobox A2 (predicted) [Callithrix jacchus]
Length = 375
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186
>gi|395830938|ref|XP_003788569.1| PREDICTED: homeobox protein Hox-A2 [Otolemur garnettii]
gi|202070724|gb|ACH95312.1| homeobox A2 (predicted) [Otolemur garnettii]
Length = 372
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 143 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 183
>gi|301128890|emb|CBL59353.1| HoxB2 [Scyliorhinus canicula]
Length = 359
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 177
>gi|410952518|ref|XP_003982926.1| PREDICTED: homeobox protein Hox-A2 [Felis catus]
Length = 376
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|184185533|gb|ACC68934.1| homeobox A2 (predicted) [Rhinolophus ferrumequinum]
Length = 373
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|348564402|ref|XP_003467994.1| PREDICTED: homeobox protein Hox-A2-like [Cavia porcellus]
Length = 375
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 186
>gi|195038435|ref|XP_001990663.1| GH19484 [Drosophila grimshawi]
gi|193894859|gb|EDV93725.1| GH19484 [Drosophila grimshawi]
Length = 787
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 172 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 212
>gi|73976163|ref|XP_851905.1| PREDICTED: homeobox protein Hox-A2 isoform 1 [Canis lupus
familiaris]
Length = 374
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 185
>gi|109067089|ref|XP_001092920.1| PREDICTED: homeobox protein Hox-A2 [Macaca mulatta]
Length = 374
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 185
>gi|195446481|ref|XP_002070800.1| GK10831 [Drosophila willistoni]
gi|194166885|gb|EDW81786.1| GK10831 [Drosophila willistoni]
Length = 816
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 201 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 241
>gi|432881687|ref|XP_004073902.1| PREDICTED: homeobox protein Hox-A2a isoform 2 [Oryzias latipes]
Length = 268
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 50 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 90
>gi|344270556|ref|XP_003407110.1| PREDICTED: homeobox protein Hox-A2-like [Loxodonta africana]
Length = 375
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA +L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAGLLDLTERQV 185
>gi|63103212|gb|AAD46167.2|AF151664_1 probiscipedia homeobox protein [Alitta virens]
Length = 193
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 21 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 61
>gi|397472984|ref|XP_003808007.1| PREDICTED: homeobox protein Hox-A2 [Pan paniscus]
Length = 360
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 131 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 171
>gi|226446765|gb|ACO58662.1| homeobox a2b [Oreochromis niloticus]
Length = 362
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 153 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 193
>gi|193786576|dbj|BAG51359.1| unnamed protein product [Homo sapiens]
Length = 431
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 180 KSPPGSAASERA-------RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 231
>gi|45553273|ref|NP_996163.1| proboscipedia, isoform B [Drosophila melanogaster]
gi|45446404|gb|AAS65120.1| proboscipedia, isoform B [Drosophila melanogaster]
Length = 777
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 197 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 237
>gi|195568805|ref|XP_002102404.1| GD19525 [Drosophila simulans]
gi|194198331|gb|EDX11907.1| GD19525 [Drosophila simulans]
Length = 789
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 205 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 245
>gi|351713528|gb|EHB16447.1| Homeobox protein Hox-B3 [Heterocephalus glaber]
Length = 426
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 187 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 226
>gi|443689502|gb|ELT91876.1| hypothetical protein CAPTEDRAFT_94911, partial [Capitella teleta]
Length = 92
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 63 PPSAALSQHQSLLNNSGR---TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
PP++ + S+ +N R T +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 18 PPTSCGNTGSSVASNHPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 77
Query: 120 T 120
Sbjct: 78 V 78
>gi|66476104|gb|AAX63749.2| HoxA2bi [Oncorhynchus mykiss]
Length = 302
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 122 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLNLTERQV 162
>gi|45553267|ref|NP_996161.1| proboscipedia, isoform D [Drosophila melanogaster]
gi|45446402|gb|AAS65118.1| proboscipedia, isoform D [Drosophila melanogaster]
Length = 772
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 192 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 232
>gi|328682715|gb|AEB33439.1| homeobox protein C1 [Gymnopis multiplicata]
Length = 34
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 29/32 (90%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTRARR+EIAS LQLNE Q
Sbjct: 1 TELEKEFHFNKYLTRARRVEIASALQLNEVQV 32
>gi|220898178|gb|ACL81434.1| HoxA2 [Latimeria menadoensis]
Length = 366
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 177
>gi|195344053|ref|XP_002038605.1| GM10530 [Drosophila sechellia]
gi|194133626|gb|EDW55142.1| GM10530 [Drosophila sechellia]
Length = 833
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 249 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 289
>gi|355568480|gb|EHH24761.1| hypothetical protein EGK_08476, partial [Macaca mulatta]
Length = 294
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 74 LLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
L N+S T +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 49 LKNSSPGTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 94
>gi|348533888|ref|XP_003454436.1| PREDICTED: homeobox protein Hox-A2b isoform 2 [Oreochromis
niloticus]
Length = 355
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 146 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 186
>gi|45553271|ref|NP_996162.1| proboscipedia, isoform C [Drosophila melanogaster]
gi|45446403|gb|AAS65119.1| proboscipedia, isoform C [Drosophila melanogaster]
Length = 777
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 197 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 237
>gi|1147628|gb|AAB48010.1| Cnox5 homeodomain protein [Eleutheria dichotoma]
Length = 259
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
R FT KQ+ ELEKEFH+N+YLTRARR+EIA +L+L E Q
Sbjct: 144 RVCFTQKQIVELEKEFHYNRYLTRARRVEIAQLLKLTEAQ 183
>gi|45549028|ref|NP_476669.3| proboscipedia, isoform A [Drosophila melanogaster]
gi|32470599|sp|P31264.2|HMPB_DROME RecName: Full=Homeotic protein proboscipedia
gi|4389432|gb|AAD19802.1| homeodomain protein [Drosophila melanogaster]
gi|45446405|gb|AAF54089.3| proboscipedia, isoform A [Drosophila melanogaster]
Length = 782
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 202 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 242
>gi|348533886|ref|XP_003454435.1| PREDICTED: homeobox protein Hox-A2b isoform 1 [Oreochromis
niloticus]
Length = 362
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 153 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 193
>gi|194742038|ref|XP_001953514.1| GF17798 [Drosophila ananassae]
gi|190626551|gb|EDV42075.1| GF17798 [Drosophila ananassae]
Length = 790
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 201 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 241
>gi|7599|emb|CAA45272.1| proboscipedia [Drosophila melanogaster]
gi|8376|emb|CAA45271.1| proboscipedia [Drosophila melanogaster]
gi|248601|gb|AAA08526.1| proboscipedia [Drosophila melanogaster]
Length = 798
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 202 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 242
>gi|221042614|dbj|BAH12984.1| unnamed protein product [Homo sapiens]
Length = 358
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 119 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 158
>gi|195498941|ref|XP_002096738.1| GE25834 [Drosophila yakuba]
gi|194182839|gb|EDW96450.1| GE25834 [Drosophila yakuba]
Length = 784
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 197 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 237
>gi|170029585|ref|XP_001842672.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863991|gb|EDS27374.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 273
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 129 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 169
>gi|387598534|gb|AFJ91923.1| homeodomain transcription factor 3, partial [Platynereis dumerilii]
Length = 351
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q
Sbjct: 181 RTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLSERQ 220
>gi|355747757|gb|EHH52254.1| Homeobox protein Hox-1K [Macaca fascicularis]
Length = 377
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 148 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 188
>gi|221045878|dbj|BAH14616.1| unnamed protein product [Homo sapiens]
Length = 358
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 119 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 158
>gi|194899125|ref|XP_001979113.1| GG10269 [Drosophila erecta]
gi|190650816|gb|EDV48071.1| GG10269 [Drosophila erecta]
Length = 811
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 226 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 266
>gi|91982989|gb|ABE68632.1| Cnox-5 [Eleutheria dichotoma]
Length = 259
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
R FT KQ+ ELEKEFH+N+YLTRARR+EIA +L+L E Q
Sbjct: 144 RVCFTQKQIVELEKEFHYNRYLTRARRVEIAQLLKLTEAQ 183
>gi|167234210|ref|NP_001107807.1| maxillopedia [Tribolium castaneum]
gi|270002809|gb|EEZ99256.1| proboscipedia [Tribolium castaneum]
Length = 654
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 139 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 179
>gi|387230985|gb|AFJ72203.1| homeobox A2, partial [Myotis laniger]
Length = 236
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 10 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 50
>gi|348533890|ref|XP_003454437.1| PREDICTED: homeobox protein Hox-A2b isoform 3 [Oreochromis
niloticus]
Length = 356
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 187
>gi|52630892|gb|AAU84906.1| Hox1-like protein variant B, partial [Ilyanassa obsoleta]
Length = 43
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 30/34 (88%)
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QL ELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 1 QLEELEKEFHFNKYLTRARRIEIAAALGLNETQV 34
>gi|403288099|ref|XP_003935252.1| PREDICTED: homeobox protein Hox-A2 [Saimiri boliviensis
boliviensis]
Length = 376
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 147 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 187
>gi|46048762|ref|NP_990481.1| homeobox protein Hox-A2 [Gallus gallus]
gi|585280|sp|Q08727.1|HXA2_CHICK RecName: Full=Homeobox protein Hox-A2
gi|415800|emb|CAA52370.1| Hoxa2 protein [Gallus gallus]
Length = 375
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|402899483|ref|XP_003912725.1| PREDICTED: homeobox protein Hox-B3 isoform 2 [Papio anubis]
Length = 469
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 230 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 269
>gi|224045294|ref|XP_002194938.1| PREDICTED: homeobox protein Hox-A2 [Taeniopygia guttata]
Length = 378
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 144 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 184
>gi|395540400|ref|XP_003772143.1| PREDICTED: homeobox protein Hox-A2 [Sarcophilus harrisii]
Length = 343
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 5/50 (10%)
Query: 76 NNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N+SG RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 112 NSSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 161
>gi|28629643|gb|AAO43027.1| HoxB2 [Latimeria menadoensis]
Length = 271
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 51 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 91
>gi|402899481|ref|XP_003912724.1| PREDICTED: homeobox protein Hox-B3 isoform 1 [Papio anubis]
Length = 433
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 194 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 233
>gi|326921911|ref|XP_003207197.1| PREDICTED: homeobox protein Hox-A2-like [Meleagris gallopavo]
Length = 296
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 65 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 105
>gi|195152087|ref|XP_002016968.1| GL22046 [Drosophila persimilis]
gi|194112025|gb|EDW34068.1| GL22046 [Drosophila persimilis]
Length = 797
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 194 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 234
>gi|354479681|ref|XP_003502038.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A2-like
[Cricetulus griseus]
Length = 345
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 116 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 156
>gi|198453492|ref|XP_002137681.1| pb, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132379|gb|EDY68239.1| pb, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 801
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 194 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 234
>gi|195963311|ref|NP_001124328.1| homeobox protein Hox-A2b [Salmo salar]
gi|157816079|gb|ABV82058.1| homeobox protein HoxA2b [Salmo salar]
gi|158702258|gb|ABW77460.1| homeobox protein HoxA2b [Salmo salar]
Length = 357
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 137 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLNLTERQV 177
>gi|390178659|ref|XP_003736700.1| pb, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859536|gb|EIM52773.1| pb, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 796
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 189 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 229
>gi|351704292|gb|EHB07211.1| Homeobox protein Hox-A2 [Heterocephalus glaber]
Length = 352
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 123 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 163
>gi|284005055|ref|NP_001164869.1| homeobox protein Hox-A2 [Oryctolagus cuniculus]
gi|217418305|gb|ACK44307.1| homeobox A2 (predicted) [Oryctolagus cuniculus]
Length = 374
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 145 RTAYTNTQLLELEKEFHFNKYLCRRRRVEIAALLDLTERQV 185
>gi|195389717|ref|XP_002053521.1| GJ23937 [Drosophila virilis]
gi|194151607|gb|EDW67041.1| GJ23937 [Drosophila virilis]
Length = 780
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 177 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 217
>gi|124054171|gb|ABM89277.1| HOXB3 [Pongo pygmaeus]
Length = 278
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 39 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 78
>gi|120974230|gb|ABM46660.1| HOXB3 [Gorilla gorilla]
Length = 277
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 38 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 77
>gi|395826612|ref|XP_003786511.1| PREDICTED: homeobox protein Hox-B3 [Otolemur garnettii]
Length = 428
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 189 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 228
>gi|255742438|gb|ACU32553.1| homeobox protein HoxA2 [Callorhinchus milii]
Length = 363
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 134 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 174
>gi|13359293|dbj|BAB33375.1| homeobox B3 [Mesocricetus auratus]
Length = 424
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 190 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 229
>gi|114666356|ref|XP_001173021.1| PREDICTED: homeobox protein Hox-B3 isoform 1 [Pan troglodytes]
gi|410225042|gb|JAA09740.1| homeobox B3 [Pan troglodytes]
gi|410352459|gb|JAA42833.1| homeobox B3 [Pan troglodytes]
Length = 431
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 192 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 231
>gi|426347610|ref|XP_004041442.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3 [Gorilla
gorilla gorilla]
Length = 427
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 188 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 227
>gi|84570137|ref|NP_002137.4| homeobox protein Hox-B3 [Homo sapiens]
gi|215274007|sp|P14651.2|HXB3_HUMAN RecName: Full=Homeobox protein Hox-B3; AltName: Full=Homeobox
protein Hox-2.7; AltName: Full=Homeobox protein Hox-2G
gi|158255800|dbj|BAF83871.1| unnamed protein product [Homo sapiens]
gi|189054741|dbj|BAG37563.1| unnamed protein product [Homo sapiens]
gi|208966498|dbj|BAG73263.1| homeobox B3 [synthetic construct]
gi|225000020|gb|AAI72242.1| Homeobox B3 [synthetic construct]
gi|225000910|gb|AAI72550.1| Homeobox B3 [synthetic construct]
Length = 431
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 192 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 231
>gi|395756601|ref|XP_002834342.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3 [Pongo
abelii]
Length = 428
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 189 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 228
>gi|149642727|ref|NP_001092644.1| homeobox protein Hox-B3 [Bos taurus]
gi|148745430|gb|AAI42500.1| HOXB3 protein [Bos taurus]
gi|296476505|tpg|DAA18620.1| TPA: homeobox B3 [Bos taurus]
Length = 426
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 187 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 226
>gi|410952542|ref|XP_003982938.1| PREDICTED: homeobox protein Hox-A4 [Felis catus]
Length = 385
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 267 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 324
>gi|410905341|ref|XP_003966150.1| PREDICTED: homeobox protein Hox-A2b-like [Takifugu rubripes]
Length = 349
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 141 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 181
>gi|124013562|gb|ABM88031.1| HOXB3 [Macaca nemestrina]
Length = 283
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 44 RTAYTSXQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 83
>gi|62958631|gb|AAY23644.1| Hox protein [Oreochromis niloticus]
Length = 206
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 56
>gi|444713453|gb|ELW54352.1| Homeobox protein Hox-A2 [Tupaia chinensis]
Length = 278
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 49 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 89
>gi|397515036|ref|XP_003827770.1| PREDICTED: homeobox protein Hox-B3 [Pan paniscus]
Length = 400
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 161 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 200
>gi|221042594|dbj|BAH12974.1| unnamed protein product [Homo sapiens]
Length = 299
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 60 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 99
>gi|157823960|ref|NP_001100512.1| homeo box B3 [Rattus norvegicus]
gi|149053988|gb|EDM05805.1| homeo box B3 (predicted) [Rattus norvegicus]
Length = 429
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 191 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 230
>gi|347972357|ref|XP_001688961.2| AGAP004648-PA [Anopheles gambiae str. PEST]
gi|333469403|gb|EDO63635.2| AGAP004648-PA [Anopheles gambiae str. PEST]
Length = 789
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 188 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 228
>gi|187469094|gb|AAI66859.1| Hoxb3 protein [Rattus norvegicus]
Length = 428
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 190 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 229
>gi|11138935|gb|AAG31555.1|AF287967_5 homeobox B3 [Homo sapiens]
gi|32380|emb|CAA34657.1| unnamed protein product [Homo sapiens]
gi|119615145|gb|EAW94739.1| homeobox B3, isoform CRA_a [Homo sapiens]
gi|119615146|gb|EAW94740.1| homeobox B3, isoform CRA_a [Homo sapiens]
gi|119615147|gb|EAW94741.1| homeobox B3, isoform CRA_a [Homo sapiens]
Length = 431
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 192 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 231
>gi|194217067|ref|XP_001499216.2| PREDICTED: homeobox protein Hox-B3-like [Equus caballus]
Length = 288
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 49 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 88
>gi|120300900|ref|NP_001073338.1| homeobox protein Hox-B3 [Mus musculus]
gi|120300925|ref|NP_034588.2| homeobox protein Hox-B3 [Mus musculus]
gi|1708353|sp|P09026.4|HXB3_MOUSE RecName: Full=Homeobox protein Hox-B3; AltName: Full=Homeobox
protein Hox-2.7; AltName: Full=Homeobox protein MH-23
gi|466269|gb|AAB60496.1| homeobox containing protein [Mus musculus]
gi|148684084|gb|EDL16031.1| homeobox B3 [Mus musculus]
gi|225000324|gb|AAI72606.1| Homeo box B3 [synthetic construct]
Length = 433
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 234
>gi|390463574|ref|XP_002748520.2| PREDICTED: homeobox protein Hox-B3 [Callithrix jacchus]
Length = 301
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 62 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 101
>gi|249224|gb|AAA08719.1| homeobox containing protein [Mus musculus]
gi|312230|emb|CAA46951.1| Hox-2.7 [Mus musculus]
Length = 433
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 234
>gi|387230993|gb|AFJ72207.1| homeobox A2, partial [Balaenoptera physalus]
Length = 237
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 56
>gi|291405873|ref|XP_002719361.1| PREDICTED: homeobox B3 [Oryctolagus cuniculus]
Length = 434
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 191 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 230
>gi|387230989|gb|AFJ72205.1| homeobox A2, partial [Rhinolophus pusillus]
Length = 245
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 56
>gi|387230983|gb|AFJ72202.1| homeobox A2, partial [Chaerephon plicatus]
Length = 245
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 56
>gi|387230979|gb|AFJ72200.1| homeobox A2, partial [Hipposideros armiger]
gi|387230981|gb|AFJ72201.1| homeobox A2, partial [Taphozous melanopogon]
gi|387230987|gb|AFJ72204.1| homeobox A2, partial [Aselliscus stoliczkanus]
Length = 245
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 56
>gi|198429593|ref|XP_002122113.1| PREDICTED: homeobox transcription factor hox2 [Ciona intestinalis]
Length = 638
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFH+NKYL R RRIEIA++L L E Q
Sbjct: 246 RTAYTNTQLLELEKEFHYNKYLCRPRRIEIATLLDLTERQV 286
>gi|387230991|gb|AFJ72206.1| homeobox A2, partial [Neophocaena phocaenoides]
Length = 231
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 9 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 49
>gi|355694992|gb|AER99857.1| homeobox A2 [Mustela putorius furo]
Length = 242
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 14 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 54
>gi|344285933|ref|XP_003414714.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3-like
[Loxodonta africana]
Length = 427
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 191 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 230
>gi|187438863|gb|ACD10894.1| Hoxa2a [Oryzias latipes]
Length = 185
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 50 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 90
>gi|88604720|gb|ABD46731.1| homeobox protein antennapedia [Endeis spinosa]
Length = 203
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 45/97 (46%), Gaps = 23/97 (23%)
Query: 46 PTSPSTDYTTPLTALKYPPSAALS-----QHQSLLNNS------------------GRTN 82
P SPS + L PPS S HQS+ N+ GR
Sbjct: 76 PQSPSALASGGLGGANVPPSPVHSPQMYNHHQSITNSGVLPSPLYPWMRSQFERKRGRQT 135
Query: 83 FTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
+T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 136 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 172
>gi|15450327|gb|AAK96033.1| homeodomain transcription factor Maxillopedia [Tribolium castaneum]
Length = 523
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 8 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 48
>gi|121222237|gb|ABM47619.1| HOXB3 [Saguinus labiatus]
Length = 311
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 181 KSPPGSAASKRA-------RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 232
>gi|403288101|ref|XP_003935253.1| PREDICTED: homeobox protein Hox-A3 [Saimiri boliviensis
boliviensis]
Length = 416
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 168 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 207
>gi|330901932|gb|AEC48471.1| homeobox protein A1 [Pelodiscus sinensis]
Length = 34
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 1 TELEKEFHFNKYLTRARRVEIAASLQLNETQV 32
>gi|193946|gb|AAA37849.1| Hox-2.8 homeobox protein, partial [Mus musculus]
Length = 72
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 56
>gi|15823130|dbj|BAB68716.1| homeobox protein [Mus musculus musculus]
Length = 246
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 17 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 57
>gi|170649676|gb|ACB21261.1| homeobox A3 isoform a (predicted) [Callicebus moloch]
Length = 443
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|121308831|dbj|BAF43722.1| transcription factor Hox2 [Metacrinus rotundus]
Length = 417
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT FT QL ELEKEFH+NKYL R RRIEIA++L+L E Q
Sbjct: 144 ARTAFTTTQLLELEKEFHYNKYLCRPRRIEIAAMLELTERQV 185
>gi|399984|sp|P31261.1|HXA2_NOTVI RecName: Full=Homeobox protein Hox-A2; AltName: Full=Homeobox
protein Hbox-2.8; Short=NvHbox-2.8
gi|213396|gb|AAA49396.1| homeobox protein, partial [Notophthalmus viridescens]
Length = 90
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 6 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 46
>gi|15823114|dbj|BAB68708.1| homeobox protein [Mus musculus]
gi|15823116|dbj|BAB68709.1| homeobox protein [Mus musculus]
gi|15823118|dbj|BAB68710.1| homeobox protein [Mus musculus musculus]
gi|15823120|dbj|BAB68711.1| homeobox protein [Mus musculus]
gi|15823122|dbj|BAB68712.1| homeobox protein [Mus musculus]
gi|15823124|dbj|BAB68713.1| homeobox protein [Mus musculus]
gi|15823126|dbj|BAB68714.1| homeobox protein [Mus musculus]
gi|15823128|dbj|BAB68715.1| homeobox protein [Mus musculus]
gi|15823132|dbj|BAB68717.1| homeobox protein [Mus spicilegus]
Length = 246
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 17 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 57
>gi|73976155|ref|XP_864544.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Canis lupus
familiaris]
Length = 442
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 235
>gi|344270552|ref|XP_003407108.1| PREDICTED: homeobox protein Hox-A3 [Loxodonta africana]
Length = 441
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|426228410|ref|XP_004008302.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A3 [Ovis
aries]
Length = 492
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 174 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 213
>gi|120974125|gb|ABM46643.1| HOXA3 [Gorilla gorilla]
Length = 267
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 19 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 58
>gi|395532696|ref|XP_003768404.1| PREDICTED: homeobox protein Hox-B3 [Sarcophilus harrisii]
Length = 409
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 47 TSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 106
+SPST K PP ++ S+ RT +T+ QL ELEKEFHFN+YL R RR
Sbjct: 144 SSPSTGGGGGGGGDKSPPGSSASKRA-------RTAYTSAQLVELEKEFHFNRYLCRPRR 196
Query: 107 IEIASVLQLNETQ 119
+E+A++L L+E Q
Sbjct: 197 VEMANLLNLSERQ 209
>gi|426355738|ref|XP_004045265.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Gorilla gorilla
gorilla]
gi|426355740|ref|XP_004045266.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Gorilla gorilla
gorilla]
Length = 443
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|410952520|ref|XP_003982927.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Felis catus]
gi|410952522|ref|XP_003982928.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Felis catus]
Length = 441
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|237651806|gb|ACR08618.1| Hox class homeodomain-containing protein pb [Myzostoma cirriferum]
Length = 49
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RTN+T+ QL ELEKEFH+NKYL R RRIEIAS L L E Q
Sbjct: 9 RTNYTHTQLVELEKEFHYNKYLCRPRRIEIASTLGLTERQV 49
>gi|226822848|gb|ACO83083.1| homeobox A4 (predicted) [Dasypus novemcinctus]
Length = 318
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 201 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 258
>gi|395830940|ref|XP_003788570.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Otolemur garnettii]
gi|395830942|ref|XP_003788571.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Otolemur garnettii]
gi|202070725|gb|ACH95313.1| homeobox A3 isoform a (predicted) [Otolemur garnettii]
Length = 443
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|334323082|ref|XP_003340340.1| PREDICTED: homeobox protein Hox-B3 isoform 2 [Monodelphis
domestica]
Length = 405
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 166 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 205
>gi|284005059|ref|NP_001164870.1| homeobox protein Hox-A3 [Oryctolagus cuniculus]
gi|217418306|gb|ACK44308.1| homeobox A3 isoform a (predicted) [Oryctolagus cuniculus]
Length = 443
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|109473519|ref|XP_001058923.1| PREDICTED: homeobox protein Hox-A3 [Rattus norvegicus]
gi|392347312|ref|XP_003749795.1| PREDICTED: homeobox protein Hox-A3 [Rattus norvegicus]
gi|392356111|ref|XP_003752226.1| PREDICTED: homeobox protein Hox-A3-like [Rattus norvegicus]
gi|149033359|gb|EDL88160.1| rCG52387, isoform CRA_a [Rattus norvegicus]
Length = 444
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 235
>gi|301754119|ref|XP_002912921.1| PREDICTED: homeobox protein Hox-A3-like [Ailuropoda melanoleuca]
Length = 324
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 76 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 115
>gi|184185534|gb|ACC68935.1| homeobox A3 isoform a (predicted) [Rhinolophus ferrumequinum]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|313253|emb|CAA51975.1| homeobox containing protein [Mus musculus]
Length = 411
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 183 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 222
>gi|387230963|gb|AFJ72192.1| homeobox A1, partial [Hipposideros pomona]
Length = 94
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 1 TELEKEFHFNKYLTRARRVEIAASLQLNETQV 32
>gi|311275746|ref|XP_003134890.1| PREDICTED: homeobox protein Hox-A3 [Sus scrofa]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|219880|dbj|BAA01891.1| homeodomain protein [Homo sapiens]
Length = 416
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 182 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 221
>gi|281182381|ref|NP_001162535.1| homeobox protein Hox-A3 [Papio anubis]
gi|160904217|gb|ABX52201.1| homeobox A3, isoform 2 (predicted) [Papio anubis]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|109067067|ref|XP_001092102.1| PREDICTED: homeobox protein Hox-A3-like isoform 4 [Macaca mulatta]
gi|109067069|ref|XP_001092226.1| PREDICTED: homeobox protein Hox-A3-like isoform 5 [Macaca mulatta]
gi|355560740|gb|EHH17426.1| hypothetical protein EGK_13833 [Macaca mulatta]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|255742462|gb|ACU32575.1| homeobox protein HoxC3 [Callorhinchus milii]
Length = 408
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRIEMANLLSLSERQ 216
>gi|126308240|ref|XP_001367096.1| PREDICTED: homeobox protein Hox-B3 isoform 1 [Monodelphis
domestica]
Length = 430
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 191 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 230
>gi|70569902|dbj|BAE06499.1| transcription factor protein [Ciona intestinalis]
Length = 114
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFH+NKYL R RRIEIA++L L E Q
Sbjct: 7 RTAYTNTQLLELEKEFHYNKYLCRPRRIEIATLLDLTERQV 47
>gi|359754096|gb|AEV59518.1| HOXB3 [Macropus eugenii]
Length = 429
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 190 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 229
>gi|213511933|ref|NP_001133020.1| homeobox protein HoxC5bb [Salmo salar]
gi|157815999|gb|ABV82018.1| homeobox protein HoxC5bb [Salmo salar]
gi|158702359|gb|ABW77547.1| homeobox protein HoxC5bb [Salmo salar]
Length = 240
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 30 KVQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLT 89
KV + P+ + H T P T P YP L RT++T Q
Sbjct: 130 KVGTLQPVQPVTLANHSTQPQTSEQQPQI---YPWMTKLHMGHEADGKRSRTSYTRYQTL 186
Query: 90 ELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
ELEKEFHFN+YLTR RRIEIA L LNE Q
Sbjct: 187 ELEKEFHFNRYLTRRRRIEIAHTLCLNERQ 216
>gi|190576599|gb|ACE79087.1| homeobox A4 (predicted) [Sorex araneus]
Length = 298
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 184 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLSERQV 241
>gi|55628352|ref|XP_527698.1| PREDICTED: homeobox protein Hox-A3 isoform 6 [Pan troglodytes]
gi|114612529|ref|XP_001162505.1| PREDICTED: homeobox protein Hox-A3 isoform 4 [Pan troglodytes]
gi|397472861|ref|XP_003807952.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Pan paniscus]
gi|397472863|ref|XP_003807953.1| PREDICTED: homeobox protein Hox-A3 isoform 2 [Pan paniscus]
gi|410254236|gb|JAA15085.1| homeobox A3 [Pan troglodytes]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|46275824|ref|NP_034582.1| homeobox protein Hox-A3 [Mus musculus]
gi|2811092|sp|P02831.2|HXA3_MOUSE RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-1.5; AltName: Full=Homeobox protein MO-10
gi|1888441|emb|CAA72404.1| homeobox-containing transcription factor [Mus musculus]
gi|66794501|gb|AAH96612.1| Homeo box A3 [Mus musculus]
gi|148666235|gb|EDK98651.1| homeobox A3, isoform CRA_a [Mus musculus]
gi|148666236|gb|EDK98652.1| homeobox A3, isoform CRA_a [Mus musculus]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 196 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 235
>gi|311275744|ref|XP_003134889.1| PREDICTED: homeobox protein Hox-A4-like [Sus scrofa]
Length = 329
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 209 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 266
>gi|226822847|gb|ACO83082.1| homeobox A3 isoform a (predicted) [Dasypus novemcinctus]
Length = 441
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|296209383|ref|XP_002751498.1| PREDICTED: homeobox protein Hox-A3 [Callithrix jacchus]
gi|167427226|gb|ABZ80207.1| homeobox A3 isoform a (predicted) [Callithrix jacchus]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|126326351|ref|XP_001368596.1| PREDICTED: homeobox protein Hox-D4-like [Monodelphis domestica]
Length = 238
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 22/108 (20%)
Query: 34 PSELSPL-GVH-PHPTSPSTDYTTPLTALKYPPSA-ALSQ-----------HQSLLNNS- 78
P+ L P G H P P PS+ + L LK PP+ AL Q H + +N +
Sbjct: 83 PASLYPGQGEHCPQPPIPSSRACSQLANLKQPPNGTALKQPAVVYPWMKKVHVNSVNPNY 142
Query: 79 -------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 143 TGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 190
>gi|30585409|gb|AAP36977.1| Homo sapiens homeo box A3 [synthetic construct]
gi|61370826|gb|AAX43558.1| homeobox A3 [synthetic construct]
gi|61370831|gb|AAX43559.1| homeobox A3 [synthetic construct]
Length = 444
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|274317370|ref|NP_001069602.2| homeobox protein Hox-A4 [Bos taurus]
gi|296488417|tpg|DAA30530.1| TPA: homeobox A4 isoform 1 [Bos taurus]
Length = 319
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 201 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 258
>gi|193786467|dbj|BAG51750.1| unnamed protein product [Homo sapiens]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|190576598|gb|ACE79086.1| homeobox A3 (predicted) [Sorex araneus]
Length = 442
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 194 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 233
>gi|52630890|gb|AAU84905.1| Hox1-like protein variant A, partial [Ilyanassa obsoleta]
Length = 43
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 30/34 (88%)
Query: 87 QLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
QL ELEKEFHFNKYLTRARRIEIA+ L LNETQ
Sbjct: 1 QLEELEKEFHFNKYLTRARRIEIAASLGLNETQV 34
>gi|297680786|ref|XP_002818149.1| PREDICTED: homeobox protein Hox-A3 [Pongo abelii]
Length = 443
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|395738618|ref|XP_002818150.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4 [Pongo
abelii]
Length = 315
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 197 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 254
>gi|116003871|ref|NP_001070293.1| homeobox protein Hox-A3 [Bos taurus]
gi|122132253|sp|Q08DG7.1|HXA3_BOVIN RecName: Full=Homeobox protein Hox-A3
gi|115304899|gb|AAI23760.1| Homeobox A3 [Bos taurus]
gi|296488434|tpg|DAA30547.1| TPA: homeobox protein Hox-A3 [Bos taurus]
Length = 442
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|403258696|ref|XP_003921887.1| PREDICTED: homeobox protein Hox-D3 [Saimiri boliviensis
boliviensis]
Length = 432
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|328682591|gb|AEB33377.1| homeobox protein D1 [Typhlonectes natans]
Length = 34
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTRARR+EIAS LQLN+TQ
Sbjct: 1 TELEKEFHFNKYLTRARRMEIASSLQLNDTQV 32
>gi|123204452|gb|ABM73557.1| homeodomain protein [Megalobrama amblycephala]
Length = 246
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 60 LKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 4 WKSPPGSAASK-------RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 56
>gi|193909|gb|AAA37834.1| homeobox protein, partial [Mus musculus]
Length = 105
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 56
>gi|13562112|ref|NP_109377.1| homeobox protein Hox-A3 isoform a [Homo sapiens]
gi|24497513|ref|NP_705895.1| homeobox protein Hox-A3 isoform a [Homo sapiens]
gi|6016293|sp|O43365.1|HXA3_HUMAN RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-1E
gi|15929500|gb|AAH15180.1| Homeobox A3 [Homo sapiens]
gi|41350073|gb|AAS00376.1| unknown [Homo sapiens]
gi|51094981|gb|EAL24225.1| homeo box A3 [Homo sapiens]
gi|119614271|gb|EAW93865.1| homeobox A3, isoform CRA_a [Homo sapiens]
gi|119614272|gb|EAW93866.1| homeobox A3, isoform CRA_a [Homo sapiens]
gi|123980138|gb|ABM81898.1| homeobox A3 [synthetic construct]
gi|123994943|gb|ABM85073.1| homeobox A3 [synthetic construct]
gi|208966490|dbj|BAG73259.1| homeobox A3 [synthetic construct]
gi|208968495|dbj|BAG74086.1| homeobox A3 [synthetic construct]
Length = 443
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|281182584|ref|NP_001162367.1| homeobox protein Hox-A4 [Papio anubis]
gi|160904218|gb|ABX52202.1| homeobox A4 (predicted) [Papio anubis]
Length = 320
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 202 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 259
>gi|385654496|gb|AFI61994.1| Hox-B3b [Anguilla japonica]
Length = 411
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 57 LTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 116
+ K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+
Sbjct: 161 CSGEKSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLS 213
Query: 117 ETQ 119
E Q
Sbjct: 214 ERQ 216
>gi|121503173|gb|ABM55137.1| HOXA3 [Macaca mulatta]
Length = 267
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 19 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 58
>gi|121483843|gb|ABM54217.1| HOXA3 [Pan paniscus]
Length = 267
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 19 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 58
>gi|395732502|ref|XP_003776074.1| PREDICTED: homeobox protein Hox-D3 [Pongo abelii]
Length = 432
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|348564406|ref|XP_003467996.1| PREDICTED: homeobox protein Hox-A3-like [Cavia porcellus]
Length = 444
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|332692501|gb|AEE90180.1| Homeobox B3b [Anguilla anguilla]
Length = 411
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 57 LTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 116
+ K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+
Sbjct: 161 CSGEKSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLS 213
Query: 117 ETQ 119
E Q
Sbjct: 214 ERQ 216
>gi|328682711|gb|AEB33437.1| homeobox protein C1 [Protopterus annectens]
Length = 34
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 1 TELEKEFHFNKYLTRARRVEIAAALELNETQV 32
>gi|301787251|ref|XP_002929041.1| PREDICTED: homeobox protein Hox-D3-like [Ailuropoda melanoleuca]
gi|281349083|gb|EFB24667.1| hypothetical protein PANDA_019124 [Ailuropoda melanoleuca]
Length = 432
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|62547246|gb|AAX86466.1| proboscipedia [Drosophila buzzatii]
Length = 139
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 89 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 129
>gi|355694995|gb|AER99858.1| homeobox A3 [Mustela putorius furo]
Length = 417
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 169 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 208
>gi|301614400|ref|XP_002936696.1| PREDICTED: homeobox protein Hox-D3 [Xenopus (Silurana) tropicalis]
Length = 394
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +TN QL ELEKEFHFN+YL R RR+E+A +L L+E Q
Sbjct: 167 RTAYTNSQLVELEKEFHFNRYLCRPRRLEMAKLLNLSERQ 206
>gi|397489126|ref|XP_003815586.1| PREDICTED: homeobox protein Hox-D3 [Pan paniscus]
Length = 432
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|255742479|gb|ACU32591.1| homeobox protein HoxD2 [Callorhinchus milii]
Length = 356
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 63 PPSAALSQHQSLLNNSG--------RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQ 114
P + + S S +N G RT +TN QL ELEKEFH+N+YL R RR+EIA++L
Sbjct: 103 PATGSFSSCSSNEDNGGPFDSSRRLRTTYTNTQLLELEKEFHYNRYLCRPRRVEIAALLD 162
Query: 115 LNETQT 120
L E Q
Sbjct: 163 LTERQV 168
>gi|426220825|ref|XP_004004612.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D3 [Ovis
aries]
Length = 421
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 238
>gi|24266676|gb|AAN52288.1| Hoxb3a protein [Morone saxatilis]
Length = 415
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 224 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 263
>gi|74004892|ref|XP_545539.2| PREDICTED: homeobox protein Hox-D3 [Canis lupus familiaris]
Length = 431
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 197 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 236
>gi|284005063|ref|NP_001164871.1| homeobox protein Hox-A4 [Oryctolagus cuniculus]
gi|217418307|gb|ACK44309.1| homeobox A4 (predicted) [Oryctolagus cuniculus]
Length = 319
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 203 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHALCLSERQV 260
>gi|51094982|gb|EAL24226.1| homeo box A3 [Homo sapiens]
gi|193787636|dbj|BAG52842.1| unnamed protein product [Homo sapiens]
Length = 285
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 37 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 76
>gi|487337|gb|AAB60683.1| homeobox containing protein [Mus musculus]
gi|1398929|gb|AAC52779.1| Hoxd3 [Mus musculus]
gi|1398931|gb|AAC52780.1| Hoxd3 [Mus musculus]
gi|74210733|dbj|BAE23694.1| unnamed protein product [Mus musculus]
gi|1090526|prf||2019256A Hox-D3 protein
Length = 417
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 183 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 222
>gi|119370784|sp|Q1KKX7.1|HXB3A_FUGRU RecName: Full=Homeobox protein Hox-B3a
gi|94482799|gb|ABF22417.1| homeobox protein HoxB3a [Takifugu rubripes]
Length = 474
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 216 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 255
>gi|19923391|ref|NP_008829.3| homeobox protein Hox-D3 [Homo sapiens]
gi|224471887|sp|P31249.3|HXD3_HUMAN RecName: Full=Homeobox protein Hox-D3; AltName: Full=Homeobox
protein Hox-4A
gi|1869799|emb|CAA71102.1| HOXD3 [Homo sapiens]
gi|13477301|gb|AAH05124.1| Homeobox D3 [Homo sapiens]
gi|14250648|gb|AAH08789.1| Homeobox D3 [Homo sapiens]
gi|119631490|gb|EAX11085.1| homeobox D3 [Homo sapiens]
gi|123989966|gb|ABM83900.1| homeobox D3 [synthetic construct]
gi|123999289|gb|ABM87221.1| homeobox D3 [synthetic construct]
gi|208966506|dbj|BAG73267.1| homeobox D3 [synthetic construct]
gi|208968519|dbj|BAG74098.1| homeobox D3 [synthetic construct]
Length = 432
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|114581897|ref|XP_001153177.1| PREDICTED: homeobox protein Hox-D3 [Pan troglodytes]
Length = 433
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 238
>gi|426337803|ref|XP_004032886.1| PREDICTED: homeobox protein Hox-D3 [Gorilla gorilla gorilla]
Length = 432
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|62857599|ref|NP_001015971.1| homeobox B3 [Xenopus (Silurana) tropicalis]
gi|89271899|emb|CAJ82652.1| homeo box B3 [Xenopus (Silurana) tropicalis]
gi|134026018|gb|AAI35407.1| homeobox B3 [Xenopus (Silurana) tropicalis]
Length = 386
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 160 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 199
>gi|976094|emb|CAA57211.1| hox1 [Podocoryna carnea]
Length = 278
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
R F+ KQ+ ELEKEFHFNKYLTRARR+EI+ L L E Q
Sbjct: 177 RVCFSQKQIVELEKEFHFNKYLTRARRVEISHTLDLTEAQ 216
>gi|226434215|gb|ACO56215.1| hoxb3a, partial [Oreochromis niloticus]
Length = 404
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 201 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 240
>gi|220898191|gb|ACL81446.1| HoxB3 [Latimeria menadoensis]
Length = 398
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 10/73 (13%)
Query: 47 TSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 106
+SPST+ + K PP ++ S+ RT +T+ QL ELEKEFHFN+YL R RR
Sbjct: 141 SSPSTES---CSGDKSPPGSSASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRR 190
Query: 107 IEIASVLQLNETQ 119
+E+A++L L+E Q
Sbjct: 191 VEMANLLNLSERQ 203
>gi|74267535|dbj|BAE44266.1| hoxB3a [Oryzias latipes]
gi|83016946|dbj|BAE53473.1| hoxB3a [Oryzias latipes]
Length = 472
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 211 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 250
>gi|355750648|gb|EHH54975.1| hypothetical protein EGM_04093 [Macaca fascicularis]
Length = 422
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|410901719|ref|XP_003964343.1| PREDICTED: homeobox protein Hox-B3a-like [Takifugu rubripes]
gi|45772175|tpg|DAA05217.1| TPA_exp: Hoxb3a [Takifugu rubripes]
Length = 477
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 219 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 258
>gi|444517764|gb|ELV11781.1| Homeobox protein Hox-B3 [Tupaia chinensis]
Length = 233
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 28 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 67
>gi|395837221|ref|XP_003791539.1| PREDICTED: homeobox protein Hox-D3 [Otolemur garnettii]
Length = 432
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|344270550|ref|XP_003407107.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-A4-like
[Loxodonta africana]
Length = 326
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N+S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 206 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 263
>gi|242011846|ref|XP_002426655.1| proboscipedia, putative [Pediculus humanus corporis]
gi|212510819|gb|EEB13917.1| proboscipedia, putative [Pediculus humanus corporis]
Length = 535
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 19 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 59
>gi|402888723|ref|XP_003907701.1| PREDICTED: homeobox protein Hox-D3 [Papio anubis]
gi|355564998|gb|EHH21487.1| hypothetical protein EGK_04567 [Macaca mulatta]
Length = 432
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|402478630|ref|NP_001257967.1| homeobox protein Hox-D3 [Rattus norvegicus]
Length = 432
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|114612533|ref|XP_001162640.1| PREDICTED: homeobox protein Hox-A4 [Pan troglodytes]
Length = 320
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 202 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 259
>gi|930065|emb|CAA32709.1| K8 homeo protein [Homo sapiens]
Length = 60
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 5 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 45
>gi|46275810|ref|NP_032291.1| homeobox protein Hox-A4 [Mus musculus]
gi|26345064|dbj|BAC36181.1| unnamed protein product [Mus musculus]
gi|148666239|gb|EDK98655.1| homeobox A4 [Mus musculus]
Length = 285
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 167 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 224
>gi|184289|gb|AAA58664.1| Hox 1.4 [Homo sapiens]
Length = 320
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 202 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 259
>gi|8182211|gb|AAB28662.2| Hoxa-4 [Mus sp.]
gi|9488660|gb|AAB30705.2| Hoxa-4 [Mus sp.]
Length = 285
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 167 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 224
>gi|6166218|sp|P06798.4|HXA4_MOUSE RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein MH-3
Length = 285
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 167 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 224
>gi|348585687|ref|XP_003478602.1| PREDICTED: homeobox protein Hox-D3-like [Cavia porcellus]
Length = 432
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|256251486|emb|CAR63646.1| putative Homeobox family member [Angiostrongylus cantonensis]
Length = 198
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
N + RTNF+ QLTELEKEFH KY+ RARR EIA L+LNE Q
Sbjct: 111 NGTNRTNFSTHQLTELEKEFHTAKYVNRARRTEIAQNLKLNEAQV 155
>gi|47225512|emb|CAG11995.1| unnamed protein product [Tetraodon nigroviridis]
Length = 65
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 1 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTEKQV 41
>gi|332692491|gb|AEE90171.1| Homeobox B3a [Anguilla anguilla]
Length = 411
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 165 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 216
>gi|170649677|gb|ACB21262.1| homeobox A4 (predicted) [Callicebus moloch]
Length = 324
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 206 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 263
>gi|208966492|dbj|BAG73260.1| homeobox A4 [synthetic construct]
Length = 320
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 202 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 259
>gi|126517502|ref|NP_034598.2| homeobox protein Hox-D3 [Mus musculus]
gi|224471899|sp|P09027.4|HXD3_MOUSE RecName: Full=Homeobox protein Hox-D3; AltName: Full=Homeobox
protein Hox-4.1; AltName: Full=Homeobox protein MH-19
gi|74227447|dbj|BAE21791.1| unnamed protein product [Mus musculus]
gi|148695232|gb|EDL27179.1| homeobox D3, isoform CRA_b [Mus musculus]
gi|187950755|gb|AAI37719.1| Homeo box D3 [Mus musculus]
gi|223459826|gb|AAI37717.1| Homeo box D3 [Mus musculus]
Length = 433
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 238
>gi|386783917|gb|AFJ24853.1| hypothetical protein, partial [Schmidtea mediterranea]
Length = 193
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 33/41 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFNKYLTR RRIEIA LQL+E Q
Sbjct: 71 RTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQV 111
>gi|296488418|tpg|DAA30531.1| TPA: homeobox A4 isoform 2 [Bos taurus]
Length = 253
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 135 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 192
>gi|432107306|gb|ELK32720.1| Homeobox protein Hox-D3 [Myotis davidii]
Length = 454
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 197 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 236
>gi|123423|sp|P09638.1|HXB2_SALSA RecName: Full=Homeobox protein Hox-B2; AltName: Full=S6
gi|213802|gb|AAA49561.1| homeo box protein, partial [Salmo salar]
Length = 60
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 5 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 45
>gi|385654482|gb|AFI61983.1| Hox-B3a [Anguilla japonica]
Length = 411
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 165 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 216
>gi|432871361|ref|XP_004071927.1| PREDICTED: homeobox protein Hox-B2a-like [Oryzias latipes]
Length = 425
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 8/85 (9%)
Query: 38 SPLGVHPHPTSP---STDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKE 94
+P +P PT+P S D +P + + A+ + + L RT +TN QL ELEKE
Sbjct: 137 TPAPSYPSPTAPGYASADVESPTDSSQAALDASAAGSRRL-----RTAYTNTQLLELEKE 191
Query: 95 FHFNKYLTRARRIEIASVLQLNETQ 119
FHFNKYL R RR+EIA++L L E Q
Sbjct: 192 FHFNKYLCRPRRVEIAALLDLTERQ 216
>gi|299473899|gb|ADJ18232.1| Hox3 protein [Gibbula varia]
Length = 257
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q
Sbjct: 18 RTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLSERQ 57
>gi|426228408|ref|XP_004008301.1| PREDICTED: homeobox protein Hox-A4 [Ovis aries]
Length = 218
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 100 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 157
>gi|148695231|gb|EDL27178.1| homeobox D3, isoform CRA_a [Mus musculus]
Length = 273
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 39 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 78
>gi|157109359|ref|XP_001650635.1| hypothetical protein AaeL_AAEL015111 [Aedes aegypti]
gi|108868445|gb|EAT32670.1| AAEL015111-PA, partial [Aedes aegypti]
Length = 94
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 13 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 53
>gi|432925686|ref|XP_004080728.1| PREDICTED: homeobox protein Hox-D3a-like [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHF++YL R RR+E+AS+L LNE Q
Sbjct: 91 RTAYTSAQLVELEKEFHFSRYLCRPRRVEMASLLNLNERQ 130
>gi|11036932|gb|AAG27426.1|AF279337_1 proboscipedia [Oncopeltus fasciatus]
Length = 86
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 41 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 81
>gi|344252747|gb|EGW08851.1| Homeobox protein Hox-A3 [Cricetulus griseus]
Length = 286
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 37 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 76
>gi|395830944|ref|XP_003788572.1| PREDICTED: homeobox protein Hox-A4 [Otolemur garnettii]
gi|202070726|gb|ACH95314.1| homeobox A4 (predicted) [Otolemur garnettii]
Length = 318
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 206 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 263
>gi|148613882|ref|NP_002132.3| homeobox protein Hox-A4 [Homo sapiens]
gi|116242514|sp|Q00056.3|HXA4_HUMAN RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; AltName: Full=Homeobox protein Hox-1D
gi|51094980|gb|EAL24224.1| homeo box A4 [Homo sapiens]
gi|119614278|gb|EAW93872.1| homeobox A4 [Homo sapiens]
gi|182887795|gb|AAI60036.1| Homeobox A4 [synthetic construct]
Length = 320
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 202 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 259
>gi|46048894|ref|NP_990074.1| homeobox protein Hox-B3 [Gallus gallus]
gi|1708352|sp|P23682.2|HXB3_CHICK RecName: Full=Homeobox protein Hox-B3; AltName: Full=Homeobox
protein Hox-2.7; Short=Chox-2.7
gi|443794|emb|CAA52613.1| HOX(B3) (CHOX 2.7) [Gallus gallus]
Length = 399
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 10/73 (13%)
Query: 47 TSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARR 106
+SPST+ + K PP ++ S+ RT +T+ QL ELEKEFHFN+YL R RR
Sbjct: 140 SSPSTET---CSGEKTPPGSSASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRR 189
Query: 107 IEIASVLQLNETQ 119
+E+A++L L+E Q
Sbjct: 190 VEMANLLNLSERQ 202
>gi|397911060|gb|AFO68806.1| homeodomain-containing protein Hox3, partial [Branchiostoma
lanceolatum]
Length = 291
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 20 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQ 59
>gi|149022294|gb|EDL79188.1| homeo box D3 (mapped), isoform CRA_a [Rattus norvegicus]
Length = 342
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|444723479|gb|ELW64134.1| Homeobox protein Hox-D3 [Tupaia chinensis]
Length = 282
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|359754085|gb|AEV59508.1| HOXA4 [Macropus eugenii]
Length = 295
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 184 HVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 241
>gi|220898179|gb|ACL81435.1| HoxA3 [Latimeria menadoensis]
Length = 411
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 57 LTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLN 116
T K PP A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L
Sbjct: 157 CTGDKSPPGPASSK-------RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLT 209
Query: 117 ETQ 119
E Q
Sbjct: 210 ERQ 212
>gi|432881683|ref|XP_004073900.1| PREDICTED: homeobox protein Hox-A3a-like [Oryzias latipes]
gi|74267505|dbj|BAE44251.1| hoxA3a [Oryzias latipes]
gi|83016931|dbj|BAE53463.1| hoxA3a [Oryzias latipes]
Length = 416
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 160 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 211
>gi|167427227|gb|ABZ80208.1| homeobox A4 (predicted) [Callithrix jacchus]
Length = 322
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 204 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 261
>gi|440899270|gb|ELR50599.1| Homeobox protein Hox-A4, partial [Bos grunniens mutus]
Length = 170
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 52 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 109
>gi|328680706|gb|AEB32468.1| homeobox protein B1 [Crocodylus siamensis]
gi|328680708|gb|AEB32469.1| homeobox protein B1 [Gymnopis multiplicata]
gi|328680710|gb|AEB32470.1| homeobox protein B1 [Typhlonectes natans]
Length = 34
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTRARR+EIA+ L+LNETQ
Sbjct: 1 TELEKEFHFNKYLTRARRVEIAATLELNETQV 32
>gi|359321212|ref|XP_539486.3| PREDICTED: homeobox protein Hox-A4 [Canis lupus familiaris]
Length = 317
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 199 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 256
>gi|259053111|emb|CAX11342.1| Hox3 protein [Parasteatoda tepidariorum]
Length = 606
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+AS+L L E Q
Sbjct: 236 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMASLLNLTERQ 276
>gi|74267551|dbj|BAE44274.1| hoxB3b [Oryzias latipes]
gi|83016958|dbj|BAE53483.1| hoxB3b [Oryzias latipes]
Length = 262
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHF++YL R RR+E+AS+L LNE Q
Sbjct: 101 RTAYTSAQLVELEKEFHFSRYLCRPRRVEMASLLNLNERQ 140
>gi|5081328|gb|AAD39348.1| hox6 protein [Nematostella vectensis]
Length = 269
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
R FT +QL ELEKEFHF+KYLTR RRIEIA+ L+L E Q
Sbjct: 162 RFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQ 201
>gi|82621587|gb|ABB86465.1| anthox6-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|110338985|gb|ABG67756.1| HOXA, partial [Nematostella vectensis]
Length = 60
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
R FT +QL ELEKEFHF+KYLTR RRIEIA+ L+L E Q
Sbjct: 5 RFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQ 44
>gi|255742443|gb|ACU32557.1| homeobox protein HoxB3 [Callorhinchus milii]
Length = 394
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 158 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 197
>gi|154183828|gb|ABS70768.1| Hoxa3a [Haplochromis burtoni]
Length = 417
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 161 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 212
>gi|156387522|ref|XP_001634252.1| predicted protein [Nematostella vectensis]
gi|156221333|gb|EDO42189.1| predicted protein [Nematostella vectensis]
Length = 264
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
R FT +QL ELEKEFHF+KYLTR RRIEIA+ L+L E Q
Sbjct: 157 RFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQ 196
>gi|123240|sp|P13544.1|HXD1_CHICK RecName: Full=Homeobox protein Hox-D1; AltName: Full=Homeobox
protein CHOX-1
gi|555451|gb|AAA48820.1| Hox 1, partial [Gallus gallus]
Length = 67
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 36/43 (83%)
Query: 78 SGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
S RT+F+ +QLTELEKEFHF++YL+RARR+E+A L+L + Q
Sbjct: 3 SLRTSFSTRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQV 45
>gi|332692462|gb|AEE90145.1| Homeobox A3a, partial [Anguilla anguilla]
gi|385654462|gb|AFI61965.1| Hox-A3a, partial [Anguilla japonica]
Length = 258
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 19 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 58
>gi|293358572|ref|XP_002729358.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
gi|392347314|ref|XP_003749796.1| PREDICTED: homeobox protein Hox-A4-like [Rattus norvegicus]
Length = 285
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 167 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 224
>gi|1398927|gb|AAC52778.1| Hoxa3, partial [Mus musculus]
Length = 227
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 143 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 182
>gi|348522801|ref|XP_003448912.1| PREDICTED: homeobox protein Hox-A3a-like isoform 1 [Oreochromis
niloticus]
Length = 421
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 163 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 214
>gi|410911100|ref|XP_003969028.1| PREDICTED: homeobox protein Hox-A3a-like isoform 1 [Takifugu
rubripes]
gi|119370772|sp|Q1KL12.1|HXA3A_FUGRU RecName: Full=Homeobox protein Hox-A3a
gi|94482762|gb|ABF22382.1| homeobox protein HoxA3a [Takifugu rubripes]
Length = 417
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 162 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 213
>gi|148236299|ref|NP_001080293.1| homeobox A3 [Xenopus laevis]
gi|27469867|gb|AAH41731.1| Hoxa3a-prov protein [Xenopus laevis]
Length = 406
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 167 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 206
>gi|9652093|gb|AAF91399.1|AF269154_1 transcription factor proboscipedia [Anopheles gambiae]
Length = 76
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 28 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 68
>gi|157816129|gb|ABV82082.1| homeobox protein HoxB3aa3 [Salmo salar]
Length = 417
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 171 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 222
>gi|66793386|ref|NP_571192.2| homeobox protein Hox-B3a [Danio rerio]
gi|66267386|gb|AAH95559.1| Homeo box B3a [Danio rerio]
Length = 417
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 172 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 223
>gi|60392404|sp|O42368.3|HXB3A_DANRE RecName: Full=Homeobox protein Hox-B3a; Short=Hox-B3
gi|26984639|emb|CAD59116.1| SI:dZ254O17.6 (homeo box protein B3a) [Danio rerio]
gi|27817786|emb|CAD61096.1| Hoxb3a protein [Danio rerio]
gi|45772167|tpg|DAA05213.1| TPA_exp: Hoxb3a variant 1 [Danio rerio]
gi|45772169|tpg|DAA05214.1| TPA_exp: Hoxb3a variant 2 [Danio rerio]
Length = 417
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 172 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 223
>gi|319429925|gb|ADV57236.1| homeodomain protein HoxB3a [Hypophthalmichthys nobilis]
Length = 230
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 1 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 40
>gi|395519809|ref|XP_003764034.1| PREDICTED: homeobox protein Hox-D3 [Sarcophilus harrisii]
Length = 430
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 238
>gi|21206563|gb|AAM33440.1| homeobox protein anthox6 [Metridium senile]
Length = 51
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
R FT QL ELEKEFHF+KYLTR+RRIEIA+ L+L ETQ
Sbjct: 2 RFTFTQLQLVELEKEFHFSKYLTRSRRIEIATSLKLTETQ 41
>gi|28629645|gb|AAO43028.1| HoxB3 [Latimeria menadoensis]
Length = 252
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 18 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 57
>gi|348517821|ref|XP_003446431.1| PREDICTED: homeobox protein Hox-B3a-like [Oreochromis niloticus]
Length = 462
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 199 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 238
>gi|319429921|gb|ADV57234.1| homeodomain protein HoxB3a [Ctenopharyngodon idella]
gi|319429923|gb|ADV57235.1| homeodomain protein HoxB3a [Hypophthalmichthys molitrix]
gi|319429927|gb|ADV57237.1| homeodomain protein HoxB3a [Squaliobarbus curriculus]
gi|319429931|gb|ADV57239.1| homeodomain protein HoxB3a [Xenocypris argentea]
gi|319429933|gb|ADV57240.1| homeodomain protein HoxB3a [Culter alburnus]
gi|319429939|gb|ADV57243.1| homeodomain protein HoxB3a [Luciobrama macrocephalus]
Length = 230
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 1 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 40
>gi|345325|pir||PC1217 homeobox protein FhHbx1 - liver fluke (fragment)
Length = 45
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 29/31 (93%)
Query: 90 ELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
ELEKEFHFNKYLTRARR+EIA+ LQLNETQ
Sbjct: 2 ELEKEFHFNKYLTRARRVEIAASLQLNETQV 32
>gi|188528951|ref|NP_001120901.1| homeobox A3 [Xenopus (Silurana) tropicalis]
gi|183985812|gb|AAI66398.1| hoxa3 protein [Xenopus (Silurana) tropicalis]
Length = 406
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 168 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 207
>gi|217035822|gb|ACJ74380.1| Hox3 [Branchiostoma lanceolatum]
Length = 409
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 138 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQ 177
>gi|148225917|ref|NP_001089733.1| homeobox protein Hox-B4 [Xenopus laevis]
gi|123238|sp|P09070.1|HXB4_XENLA RecName: Full=Homeobox protein Hox-B4; AltName: Full=Xhox-1A
gi|214265|gb|AAA49756.1| homeobox protein 1A [Xenopus laevis]
gi|76780348|gb|AAI06430.1| MGC131119 protein [Xenopus laevis]
Length = 232
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%)
Query: 43 HPHPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLT 102
H HP SP D K S A S + RT +T +Q+ ELEKEFH+N+YLT
Sbjct: 108 HKHPDSPEQDPVVYPWMKKAHISKATSTYSDGEAKRSRTAYTRQQVLELEKEFHYNRYLT 167
Query: 103 RARRIEIASVLQLNETQ 119
R RR+EIA L+L+E Q
Sbjct: 168 RRRRVEIAHTLRLSERQ 184
>gi|4760768|dbj|BAA77403.1| PLOX3-Dj [Dugesia japonica]
Length = 363
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFNKYLTR RRIEIA LQL+E Q
Sbjct: 240 NRTAYTRQQILELEKEFHFNKYLTRKRRIEIAQSLQLSERQV 281
>gi|395540364|ref|XP_003772125.1| PREDICTED: homeobox protein Hox-A3 [Sarcophilus harrisii]
Length = 443
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 206 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 245
>gi|359754117|gb|AEV59537.1| HOXD3 [Macropus eugenii]
Length = 429
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|319429937|gb|ADV57242.1| homeodomain protein HoxB3a [Ochetobius elongatus]
Length = 230
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 1 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 40
>gi|126326353|ref|XP_001368627.1| PREDICTED: homeobox protein Hox-D3 [Monodelphis domestica]
Length = 431
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 200 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 239
>gi|62958645|gb|AAY23648.1| Hox protein [Oreochromis niloticus]
Length = 289
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 26 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 65
>gi|157816127|gb|ABV82081.1| homeobox protein HoxB3aa2 [Salmo salar]
Length = 401
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 155 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 206
>gi|213512373|ref|NP_001133048.1| homeobox protein HoxB3aa [Salmo salar]
gi|157816093|gb|ABV82065.1| homeobox protein HoxB3aa [Salmo salar]
gi|158702270|gb|ABW77469.1| homeobox protein HoxB3aa [Salmo salar]
Length = 418
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 172 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 223
>gi|301128889|emb|CBL59352.1| HoxB3 [Scyliorhinus canicula]
Length = 394
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 157 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 196
>gi|432933123|ref|XP_004081816.1| PREDICTED: homeobox protein Hox-D3-like [Oryzias latipes]
Length = 399
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 168 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 207
>gi|397911058|gb|AFO68805.1| homeodomain-containing protein Hox3, partial [Branchiostoma
lanceolatum]
Length = 396
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 131 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQ 170
>gi|1708286|sp|P50901.1|HOX3_BRAFL RecName: Full=Homeobox protein HOX3
gi|5720|emb|CAA48180.1| Amphihox3 [Branchiostoma floridae]
Length = 411
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 139 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQ 178
>gi|14916593|sp|Q9IA21.1|HXA3_HETFR RecName: Full=Homeobox protein Hox-A3
gi|7271830|gb|AAF44641.1|AF224262_3 HoxA3 [Heterodontus francisci]
Length = 410
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 172 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 211
>gi|354472311|ref|XP_003498383.1| PREDICTED: homeobox protein Hox-D3-like, partial [Cricetulus
griseus]
Length = 272
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 237
>gi|449268330|gb|EMC79199.1| Homeobox protein Hox-A3 [Columba livia]
Length = 413
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 216
>gi|123917996|sp|Q3V5Z9.1|HXD3_ORYLA RecName: Full=Homeobox protein Hox-D3
gi|74267577|dbj|BAE44287.1| hoxD3a [Oryzias latipes]
gi|83016980|dbj|BAE53501.1| hoxD3a [Oryzias latipes]
Length = 395
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 164 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 203
>gi|222478310|gb|ACM62732.1| homeodomain transcription factor protein HOX1 [Clytia
hemisphaerica]
Length = 301
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
R F+ KQ+ ELEKEFHFNKYLTRARR+EI+ L L E Q
Sbjct: 212 RICFSQKQVVELEKEFHFNKYLTRARRVEISQSLNLTEAQ 251
>gi|60392413|sp|Q8AWZ2.1|HXA3A_DANRE RecName: Full=Homeobox protein Hox-A3a
gi|23503779|emb|CAD52134.1| SI:dZ227P06.1 (homeo box A3a) [Danio rerio]
gi|49904267|gb|AAH76469.1| Hoxa3a protein [Danio rerio]
Length = 410
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 155 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 206
>gi|328680704|gb|AEB32467.1| homeobox protein B1 [Pelodiscus sinensis]
Length = 34
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTRARR+EIA+ L LNETQ
Sbjct: 1 TELEKEFHFNKYLTRARRVEIAATLDLNETQV 32
>gi|224045296|ref|XP_002194899.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Taeniopygia guttata]
Length = 413
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 216
>gi|400180341|gb|AFP73308.1| Hoxa3beta [Polyodon spathula]
Length = 413
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 173 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLSLTERQ 212
>gi|327280446|ref|XP_003224963.1| PREDICTED: homeobox protein Hox-A3-like [Anolis carolinensis]
Length = 429
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 195 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 234
>gi|326921891|ref|XP_003207187.1| PREDICTED: homeobox protein Hox-A3-like [Meleagris gallopavo]
Length = 413
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 216
>gi|38305291|gb|AAR16188.1| Hox class homeodomain-containing protein Hox3 [Euprymna scolopes]
Length = 386
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q
Sbjct: 121 RTAYTSAQLVELEKEFHFNQYLCRPRRIEMAALLNLSERQ 160
>gi|319429935|gb|ADV57241.1| homeodomain protein HoxB3a [Opsariichthys bidens]
Length = 230
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 1 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 40
>gi|90650|pir||C29585 homeotic protein Hox 4 precursor - mouse (fragment)
Length = 120
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+Y R RR+E+A++L L+E Q
Sbjct: 3 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYFVRPRRVEMANLLNLSERQ 54
>gi|45383083|ref|NP_989879.1| homeobox protein Hox-A3 [Gallus gallus]
gi|363730026|ref|XP_003640749.1| PREDICTED: homeobox protein Hox-A3-like [Gallus gallus]
gi|3201973|gb|AAC19377.1| homeodomain protein HOXD-3 [Gallus gallus]
Length = 413
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 216
>gi|158939061|sp|O93353.2|HXA3_CHICK RecName: Full=Homeobox protein Hox-A3; AltName: Full=Homeobox
protein Hox-D3
gi|31339376|dbj|BAC77105.1| homeobox protein Hoxa3 [Gallus gallus]
Length = 413
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 216
>gi|3150080|emb|CAA06645.1| hox3 [Cupiennius salei]
Length = 576
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q
Sbjct: 213 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMANLLNLSERQ 253
>gi|332242652|ref|XP_003270497.1| PREDICTED: homeobox protein Hox-A5-like isoform 3 [Nomascus
leucogenys]
Length = 326
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 225 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 265
>gi|219870099|gb|ACL50280.1| homeobox protein Hoxb-4 [Xenopus laevis]
Length = 230
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%)
Query: 43 HPHPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLT 102
H HP SP D K S A S + RT +T +Q+ ELEKEFH+N+YLT
Sbjct: 106 HKHPDSPEQDPVVYPWMKKAHISKATSTYSDGEAKRSRTAYTRQQVLELEKEFHYNRYLT 165
Query: 103 RARRIEIASVLQLNETQ 119
R RR+EIA L+L+E Q
Sbjct: 166 RRRRVEIAHTLRLSERQ 182
>gi|172355404|ref|NP_001116487.1| homeobox B4 [Xenopus (Silurana) tropicalis]
gi|171846845|gb|AAI61550.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 234
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 12/83 (14%)
Query: 43 HPHPTSPSTDYTTPLTALKYPPS--AALSQHQSLLNNS----GRTNFTNKQLTELEKEFH 96
H HP SP D + YP A +S+ S ++ RT +T +Q+ ELEKEFH
Sbjct: 110 HKHPDSPGQD------PVVYPWMKKAHISRASSTYSDGEAKRSRTAYTRQQVLELEKEFH 163
Query: 97 FNKYLTRARRIEIASVLQLNETQ 119
+N+YLTR RR+EIA L+L+E Q
Sbjct: 164 YNRYLTRRRRVEIAHTLRLSERQ 186
>gi|126341821|ref|XP_001362823.1| PREDICTED: homeobox protein Hox-A3 isoform 1 [Monodelphis
domestica]
Length = 455
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 218 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 257
>gi|125489400|gb|ABN42909.1| homeodomain transcription factor Hox3 [Thermobia domestica]
Length = 277
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 19/81 (23%)
Query: 58 TALKYPPSAALSQHQSLLNNSG-------------------RTNFTNKQLTELEKEFHFN 98
T ++ PP + +HQ++L+ RT +T+ QL ELEKEFHFN
Sbjct: 168 TKIRSPPHISTLEHQTMLHQQADQQGIVSSEYSQDQPAKRARTAYTSAQLVELEKEFHFN 227
Query: 99 KYLTRARRIEIASVLQLNETQ 119
+YL R RRIE+A++L L E Q
Sbjct: 228 RYLCRPRRIEMAALLNLTERQ 248
>gi|193924|gb|AAA37840.1| homeobox mh19-related protein, partial [Mus musculus]
Length = 210
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+Y R RR+E+A++L L+E Q
Sbjct: 32 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYFVRPRRVEMANLLNLSERQ 83
>gi|3598852|gb|AAC35935.1| proboscipedia [Archegozetes longisetosus]
Length = 60
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 5 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 45
>gi|301128877|emb|CBL59341.1| HoxA3 [Scyliorhinus canicula]
Length = 413
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 175 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 214
>gi|225543572|ref|NP_571200.1| homeobox protein Hox-D3a [Danio rerio]
gi|223590219|sp|O42370.2|HXD3A_DANRE RecName: Full=Homeobox protein Hox-D3a; Short=Hox-D3
Length = 396
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 165 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 204
>gi|284795292|ref|NP_001165253.1| homeobox protein HoxB3ab [Salmo salar]
gi|157816111|gb|ABV82074.1| homeobox protein HoxB3ab [Salmo salar]
gi|158702282|gb|ABW77480.1| homeobox protien HoxB3ab [Salmo salar]
Length = 404
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 170 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 209
>gi|59808843|gb|AAH90114.1| hoxb4 protein [Xenopus (Silurana) tropicalis]
Length = 233
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 12/83 (14%)
Query: 43 HPHPTSPSTDYTTPLTALKYPPS--AALSQHQSLLNNS----GRTNFTNKQLTELEKEFH 96
H HP SP D + YP A +S+ S ++ RT +T +Q+ ELEKEFH
Sbjct: 109 HKHPDSPGQD------PVVYPWMKKAHISRASSTYSDGEAKRSRTAYTRQQVLELEKEFH 162
Query: 97 FNKYLTRARRIEIASVLQLNETQ 119
+N+YLTR RR+EIA L+L+E Q
Sbjct: 163 YNRYLTRRRRVEIAHTLRLSERQ 185
>gi|327275808|ref|XP_003222664.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3-like
[Anolis carolinensis]
Length = 410
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 169 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 208
>gi|15425738|dbj|BAB64346.1| homeotic protein [Daphnia magna]
gi|109944917|dbj|BAE96985.1| Antennapedia [Daphnia magna]
gi|109944921|dbj|BAE96987.1| Antennapedia [Daphnia magna]
gi|109944923|dbj|BAE96988.1| Antennapedia [Daphnia magna]
gi|109944925|dbj|BAE96989.1| Antennapedia [Daphnia magna]
gi|109944928|dbj|BAE96991.1| Antennapedia [Daphnia magna]
gi|109944931|dbj|BAE96993.1| Antennapedia [Daphnia magna]
Length = 627
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 44/89 (49%)
Query: 31 VQIPSELSPLGVHPHPTSPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTNKQLTE 90
+ + E SPL H D +P +L P + Q GR +T Q E
Sbjct: 501 IDLHQEHSPLDGSDHIPPLDMDGESPPGSLHDSPLYPWMRSQFAERKRGRQTYTRFQTLE 560
Query: 91 LEKEFHFNKYLTRARRIEIASVLQLNETQ 119
LEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 561 LEKEFHFNRYLTRRRRIEIAHALCLTERQ 589
>gi|400180328|gb|AFP73296.1| Hoxa3alpha [Polyodon spathula]
Length = 413
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 173 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 212
>gi|18858827|ref|NP_571609.1| homeobox protein Hox-A3a [Danio rerio]
gi|4322058|gb|AAD15938.1| homeobox protein [Danio rerio]
Length = 411
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 156 KSPPGSAASKR-------ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 207
>gi|359754084|gb|AEV59507.1| HOXA3 [Macropus eugenii]
Length = 438
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 201 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 240
>gi|443689504|gb|ELT91878.1| hypothetical protein CAPTEDRAFT_219808 [Capitella teleta]
Length = 201
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L E Q
Sbjct: 38 RTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLTERQ 77
>gi|5739142|gb|AAD50361.1|AF104009_1 proboscipedia protein [Thermobia domestica]
Length = 58
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 56
>gi|27525471|emb|CAD59668.1| putative homeobox protein hox2 [Ciona intestinalis]
Length = 134
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFH+NKYL R RRIEIA+ L L E Q
Sbjct: 11 RTAYTNTQLLELEKEFHYNKYLCRPRRIEIATRLDLTERQV 51
>gi|121308833|dbj|BAF43723.1| transcription factor Hox4 [Metacrinus rotundus]
Length = 280
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 190 RTSYTRQQILELEKEFHFNRYLTRRRRIEIAQALGLSERQ 229
>gi|328778440|ref|XP_623903.2| PREDICTED: homeotic protein Sex combs reduced [Apis mellifera]
Length = 380
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 279 QSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 331
>gi|403288103|ref|XP_003935254.1| PREDICTED: homeobox protein Hox-A4, partial [Saimiri boliviensis
boliviensis]
Length = 163
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 43 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 100
>gi|269931711|gb|ACZ54375.1| homeobox A3 [Monodelphis domestica]
Length = 150
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 8 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 47
>gi|319429388|gb|ADV56969.1| homeodomain protein HoxD3a [Opsariichthys bidens]
Length = 287
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 148 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 187
>gi|405967561|gb|EKC32709.1| Homeobox protein HOX3 [Crassostrea gigas]
Length = 402
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L E Q
Sbjct: 148 RTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLSLTERQ 187
>gi|319429384|gb|ADV56967.1| homeodomain protein HoxD3a [Hypophthalmichthys nobilis]
Length = 284
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 145 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 184
>gi|213513003|ref|NP_001133026.1| homeobox protein HoxD3aa [Salmo salar]
gi|157816017|gb|ABV82027.1| homeobox protein HoxD3aa [Salmo salar]
gi|158702369|gb|ABW77556.1| homeobox protein HoxD3aa [Salmo salar]
Length = 397
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 169 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 208
>gi|14010239|gb|AAK51912.1|AF361328_1 Hox3 [Folsomia candida]
Length = 225
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFH+N+YL R RRIE+AS+L L E Q
Sbjct: 10 RTAYTSAQLVELEKEFHYNRYLCRPRRIEMASLLSLTERQ 49
>gi|397911072|gb|AFO68812.1| homeodomain-containing protein Hox7, partial [Branchiostoma
lanceolatum]
Length = 127
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 30 KVQIPSELSPLGVHP-HPT---SPSTDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFTN 85
+ ++ +++ +G HP HP +P+ + T +T YP + + + GR +T
Sbjct: 4 QAEVRKDMAGVGGHPGHPVQQANPALN-TAQMTTPIYPWMRSTAPER----KRGRQTYTR 58
Query: 86 KQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
Q ELEKEFHFNKYLTR RRIEIA L L E Q
Sbjct: 59 YQTLELEKEFHFNKYLTRRRRIEIAHALCLTERQ 92
>gi|213511652|ref|NP_001135143.1| homeobox protein HoxA3aa [Salmo salar]
gi|157816047|gb|ABV82042.1| homeobox protein HoxA3aa [Salmo salar]
Length = 422
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 178 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 217
>gi|213511470|ref|NP_001135142.1| homeobox protein HoxD3ab [Salmo salar]
gi|157816031|gb|ABV82034.1| homeobox protein HoxD3ab [Salmo salar]
Length = 399
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 171 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 210
>gi|319429392|gb|ADV56971.1| homeodomain protein HoxD3a [Luciobrama macrocephalus]
Length = 286
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 147 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 186
>gi|319429378|gb|ADV56964.1| homeodomain protein HoxD3a [Mylopharyngodon piceus]
Length = 289
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 150 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 189
>gi|157816067|gb|ABV82052.1| homeobox protein HoxA3ab [Salmo salar]
Length = 422
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 216
>gi|119617143|gb|EAW96737.1| hCG2044077 [Homo sapiens]
Length = 321
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 258 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 297
>gi|260835441|ref|XP_002612717.1| hypothetical protein BRAFLDRAFT_102176 [Branchiostoma floridae]
gi|229298096|gb|EEN68726.1| hypothetical protein BRAFLDRAFT_102176 [Branchiostoma floridae]
Length = 507
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 234 ARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQ 274
>gi|123204569|gb|ABM73583.1| homeodomain protein [Megalobrama amblycephala]
Length = 243
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 12 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 51
>gi|332692534|gb|AEE90209.1| Homeobox D3a [Anguilla anguilla]
gi|385654531|gb|AFI62025.1| Hox-D3a [Anguilla japonica]
Length = 396
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 165 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 204
>gi|41581554|gb|AAS07618.1| homeobox protein Hox3a, partial [Perionyx excavatus]
Length = 94
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +++ QL ELEKEFHFN+YL R RRIE+AS+L+L+E Q
Sbjct: 46 RTAYSSSQLVELEKEFHFNRYLCRPRRIEMASMLKLSERQ 85
>gi|444713454|gb|ELW54353.1| Homeobox protein Hox-A3 [Tupaia chinensis]
Length = 620
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 22 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 62
>gi|403296831|ref|XP_003939298.1| PREDICTED: homeobox protein Hox-C10 [Saimiri boliviensis
boliviensis]
Length = 321
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 258 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 297
>gi|319429380|gb|ADV56965.1| homeodomain protein HoxD3a [Ctenopharyngodon idella]
Length = 288
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 149 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 188
>gi|410980871|ref|XP_003996797.1| PREDICTED: homeobox protein Hox-B3 [Felis catus]
Length = 428
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ L ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 189 RTAYTSAHLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 228
>gi|158702226|gb|ABW77444.1| homeobox protein HoxA3aa [Salmo salar]
Length = 264
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 20 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 59
>gi|348519657|ref|XP_003447346.1| PREDICTED: homeobox protein Hox-D3 [Oreochromis niloticus]
Length = 399
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 168 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 207
>gi|156551129|ref|XP_001603788.1| PREDICTED: hypothetical protein LOC100120119 [Nasonia vitripennis]
Length = 918
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 36/51 (70%)
Query: 69 SQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
SQ ++ L RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 211 SQQENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 261
>gi|348522803|ref|XP_003448913.1| PREDICTED: homeobox protein Hox-A3a-like isoform 2 [Oreochromis
niloticus]
Length = 407
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 161 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 200
>gi|254212179|gb|ACT65754.1| Hoxa3 [Leucoraja erinacea]
Length = 411
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 173 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 212
>gi|158702379|gb|ABW77565.1| homeobox protein HoxD3ab [Salmo salar]
Length = 399
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 171 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 210
>gi|196114697|ref|NP_001124470.1| homeobox protein HoxA3ab [Salmo salar]
gi|158702246|gb|ABW77454.1| homeobox protein HoxA3ab [Salmo salar]
Length = 422
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 177 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 216
>gi|553929|gb|AAA37846.1| homeobox mh23-related protein, partial [Mus musculus]
Length = 186
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 48 RTTYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 87
>gi|383849607|ref|XP_003700436.1| PREDICTED: homeobox protein Hox-A5a-like [Megachile rotundata]
Length = 373
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 272 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 324
>gi|193888|gb|AAA37822.1| homeo peptide, partial [Mus musculus]
Length = 74
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 7/58 (12%)
Query: 63 PPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
PP A S+ GRT +T QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 2 PPGQASSKR-------GRTAYTRPQLVELEKEFHFNRYLMRPRRVEMANLLNLTERQI 52
>gi|402886197|ref|XP_003906524.1| PREDICTED: homeobox protein Hox-C10 [Papio anubis]
Length = 320
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 257 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 296
>gi|255742437|gb|ACU32552.1| homeobox protein HoxA3 [Callorhinchus milii]
Length = 409
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 171 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 210
>gi|62958699|gb|AAY23665.1| Hox protein [Oreochromis niloticus]
Length = 247
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 16 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 55
>gi|410896780|ref|XP_003961877.1| PREDICTED: homeobox protein Hox-D3a-like [Takifugu rubripes]
Length = 393
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 164 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 203
>gi|350405517|ref|XP_003487459.1| PREDICTED: hypothetical protein LOC100747162 [Bombus impatiens]
Length = 372
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 271 QSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 323
>gi|340727747|ref|XP_003402198.1| PREDICTED: hypothetical protein LOC100643224 [Bombus terrestris]
Length = 372
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 271 QSTVNANGEVKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 323
>gi|123304|sp|P09020.1|HXC5_XENLA RecName: Full=Homeobox protein Hox-C5; AltName: Full=XlHbox-5
gi|1334653|emb|CAA30126.1| unnamed protein product [Xenopus laevis]
Length = 87
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 35/58 (60%)
Query: 62 YPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
YP L RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 6 YPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 63
>gi|269931713|gb|ACZ54376.1| homeobox D3 [Monodelphis domestica]
Length = 157
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 48 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 87
>gi|150251587|gb|AAS07617.2| homeobox protein pb [Perionyx excavatus]
Length = 53
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFHFNKYL R RRIEIA+ L L E Q
Sbjct: 5 RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAATLNLTERQV 45
>gi|156387518|ref|XP_001634250.1| predicted protein [Nematostella vectensis]
gi|156221331|gb|EDO42187.1| predicted protein [Nematostella vectensis]
Length = 63
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT++TNKQL ELEKEFHFNKYL +RR EI+ LQL E Q
Sbjct: 5 RTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQV 45
>gi|37625188|gb|AAQ95789.1| HOXD4 [Xenopus laevis]
Length = 218
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 132 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSECQ 171
>gi|301128904|emb|CBL59366.1| HoxD2 [Scyliorhinus canicula]
Length = 364
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFH+N+YL R RR+EIA++L L E Q
Sbjct: 136 RTTYTNTQLLELEKEFHYNRYLCRPRRVEIAALLDLTERQV 176
>gi|410911102|ref|XP_003969029.1| PREDICTED: homeobox protein Hox-A3a-like isoform 2 [Takifugu
rubripes]
Length = 404
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 161 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 200
>gi|301612427|ref|XP_002935734.1| PREDICTED: homeobox protein Hox-D3 [Xenopus (Silurana) tropicalis]
Length = 415
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 184 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 223
>gi|148225480|ref|NP_001091156.1| homeobox protein Hox-D3 [Xenopus laevis]
gi|223635192|sp|A1L2P5.1|HXD3_XENLA RecName: Full=Homeobox protein Hox-D3
gi|120537996|gb|AAI29641.1| LOC100036911 protein [Xenopus laevis]
Length = 413
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 182 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 221
>gi|354472313|ref|XP_003498384.1| PREDICTED: homeobox protein Hox-A4-like [Cricetulus griseus]
Length = 213
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 71 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 110
>gi|319429390|gb|ADV56970.1| homeodomain protein HoxD3a [Ochetobius elongatus]
Length = 296
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 157 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 196
>gi|268575252|ref|XP_002642605.1| C. briggsae CBR-CEH-13 protein [Caenorhabditis briggsae]
Length = 202
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 32/44 (72%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N + RTNFT QLTELEKEFH KY+ R RR EIAS L+L E Q
Sbjct: 117 NGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQ 160
>gi|54607270|gb|AAL23667.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 211 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 263
>gi|385654517|gb|AFI62013.1| Hox-C5b [Anguilla japonica]
Length = 240
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 177 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQ 216
>gi|332242650|ref|XP_003270496.1| PREDICTED: homeobox protein Hox-A5-like isoform 2 [Nomascus
leucogenys]
Length = 302
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 201 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 241
>gi|332242648|ref|XP_003270495.1| PREDICTED: homeobox protein Hox-A5-like isoform 1 [Nomascus
leucogenys]
Length = 300
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 199 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 239
>gi|220898215|gb|ACL81468.1| HoxD3 [Latimeria menadoensis]
Length = 396
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 165 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 204
>gi|238822187|gb|ACR58763.1| sex combs reduced [Onthophagus sagittarius]
Length = 298
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 218 QSTVNANGGTKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 270
>gi|201023305|ref|NP_001128396.1| sex combs reduced [Nasonia vitripennis]
Length = 390
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 289 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 341
>gi|262263019|gb|ACY39979.1| HoxD2 [Heterodontus francisci]
Length = 389
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +TN QL ELEKEFH+N+YL R RR+EIA++L L E Q
Sbjct: 161 RTTYTNTQLLELEKEFHYNRYLCRPRRVEIAALLDLTERQV 201
>gi|285206863|gb|ADC35163.1| deformed [Pyrrhopeplus posthumus]
Length = 164
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T Q+ ELEKEFH+NKYLTR RRIEIA VL L+E Q
Sbjct: 4 RTAYTRHQILELEKEFHYNKYLTRRRRIEIAHVLCLSERQ 43
>gi|332692524|gb|AEE90200.1| Homeobox C5b [Anguilla anguilla]
Length = 240
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 177 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQ 216
>gi|315419577|gb|ADU15764.1| homeobox protein Hox-D3 [Anas platyrhynchos]
Length = 125
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 41 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 80
>gi|81673924|gb|AAI09945.1| Homeobox A4 [Bos taurus]
Length = 253
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 135 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHKLCLSERQV 192
>gi|338227733|gb|AEI91062.1| sex combs reduced [Onthophagus binodis]
Length = 300
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 229 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 281
>gi|172087584|ref|XP_001913334.1| Hox4.1 [Oikopleura dioica]
gi|48994254|gb|AAT47829.1| Hox4.1 [Oikopleura dioica]
Length = 197
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T Q ELEKEFHFN+YLTR RRIEIA+ LQL+E Q
Sbjct: 133 RTAYTRHQTLELEKEFHFNRYLTRKRRIEIATTLQLSERQV 173
>gi|13272504|gb|AAK17185.1|AF327747_1 Hox3, partial [Haliotis asinina]
Length = 162
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L E Q
Sbjct: 123 RTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLTERQ 162
>gi|313240264|emb|CBY32609.1| unnamed protein product [Oikopleura dioica]
Length = 194
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T Q ELEKEFHFN+YLTR RRIEIA+ LQL+E Q
Sbjct: 130 RTAYTRHQTLELEKEFHFNRYLTRKRRIEIATTLQLSERQV 170
>gi|432112557|gb|ELK35273.1| Homeobox protein Hox-C5 [Myotis davidii]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|426238974|ref|XP_004013411.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-B3 [Ovis
aries]
Length = 327
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
Query: 61 KYPPSAALSQHQSLLNNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
K PP +A S+ RT +T+ +L ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 182 KSPPGSAASKRA-------RTAYTSARLVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 233
>gi|17552734|ref|NP_498655.1| Protein CEH-13 [Caenorhabditis elegans]
gi|6226632|sp|P17488.2|HM13_CAEEL RecName: Full=Homeobox protein ceh-13
gi|4160165|emb|CAA34929.1| ceh-13 homeodomain protein [Caenorhabditis elegans]
gi|351021336|emb|CCD63600.1| Protein CEH-13 [Caenorhabditis elegans]
Length = 202
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 32/44 (72%)
Query: 76 NNSGRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
N + RTNFT QLTELEKEFH KY+ R RR EIAS L+L E Q
Sbjct: 114 NGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQ 157
>gi|354479684|ref|XP_003502039.1| PREDICTED: homeobox protein Hox-A4-like [Cricetulus griseus]
Length = 138
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 37 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 77
>gi|444513900|gb|ELV10485.1| Homeobox protein Hox-C5 [Tupaia chinensis]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|355694997|gb|AER99859.1| homeobox A4 [Mustela putorius furo]
Length = 141
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 24 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 81
>gi|28629673|gb|AAO43042.1| HoxD3 [Latimeria menadoensis]
Length = 248
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 17 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 56
>gi|344266087|ref|XP_003405112.1| PREDICTED: homeobox protein Hox-C5-like [Loxodonta africana]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|262263018|gb|ACY39978.1| HoxD3 [Heterodontus francisci]
Length = 394
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 163 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 202
>gi|255742478|gb|ACU32590.1| homeobox protein HoxD3 [Callorhinchus milii]
Length = 394
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 163 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 202
>gi|158508520|ref|NP_034599.2| homeobox protein Hox-D4 [Mus musculus]
gi|114152826|sp|P10628.3|HXD4_MOUSE RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-4.2; AltName: Full=Homeobox protein Hox-5.1
gi|74183224|dbj|BAE22547.1| unnamed protein product [Mus musculus]
Length = 250
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 195
>gi|28376623|ref|NP_783857.1| homeobox protein Hox-C5 [Mus musculus]
gi|157822081|ref|NP_001101586.1| homeo box C5 [Rattus norvegicus]
gi|149714970|ref|XP_001504605.1| PREDICTED: homeobox protein Hox-C5-like [Equus caballus]
gi|297692045|ref|XP_002823377.1| PREDICTED: homeobox protein Hox-C5 [Pongo abelii]
gi|311255483|ref|XP_003126250.1| PREDICTED: homeobox protein Hox-C5-like [Sus scrofa]
gi|332207730|ref|XP_003252949.1| PREDICTED: homeobox protein Hox-C5 [Nomascus leucogenys]
gi|335287896|ref|XP_003355471.1| PREDICTED: homeobox protein Hox-C5-like [Sus scrofa]
gi|410964589|ref|XP_003988836.1| PREDICTED: homeobox protein Hox-C5 [Felis catus]
gi|114152822|sp|P32043.3|HXC5_MOUSE RecName: Full=Homeobox protein Hox-C5; AltName: Full=Homeobox
protein Hox-3.4; AltName: Full=Homeobox protein Hox-6.2
gi|26347351|dbj|BAC37324.1| unnamed protein product [Mus musculus]
gi|109731984|gb|AAI15552.1| Homeo box C5 [Mus musculus]
gi|109731987|gb|AAI15553.1| Homeo box C5 [Mus musculus]
gi|148671995|gb|EDL03942.1| homeobox C5 [Mus musculus]
gi|149031889|gb|EDL86801.1| homeo box C5 (predicted) [Rattus norvegicus]
gi|355564297|gb|EHH20797.1| Homeobox protein Hox-3D [Macaca mulatta]
gi|355786155|gb|EHH66338.1| Homeobox protein Hox-3D [Macaca fascicularis]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|328682589|gb|AEB33376.1| homeobox protein D1 [Gymnopis multiplicata]
Length = 34
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 89 TELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
TELEKEFHFNKYLTR+RRIEIA+ LQLN+TQ
Sbjct: 1 TELEKEFHFNKYLTRSRRIEIANSLQLNDTQV 32
>gi|146324933|sp|A2D4P8.1|HXD4_ATEGE RecName: Full=Homeobox protein Hox-D4
gi|146324935|sp|A2D5I1.1|HXD4_LAGLA RecName: Full=Homeobox protein Hox-D4
gi|122053832|gb|ABM65895.1| HOXD4 [Ateles geoffroyi]
gi|122934866|gb|ABM68173.1| HOXD4 [Lagothrix lagotricha]
Length = 255
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|426224342|ref|XP_004006330.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-C5 [Ovis
aries]
Length = 227
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 164 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 203
>gi|76825416|gb|AAI07173.1| Hoxa4 protein [Mus musculus]
Length = 187
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLNNS--------GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N+S RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 69 HVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 126
>gi|300797993|ref|NP_001178280.1| homeobox protein Hox-C5 [Bos taurus]
gi|296487931|tpg|DAA30044.1| TPA: homeobox C5-like [Bos taurus]
gi|440900712|gb|ELR51790.1| Homeobox protein Hox-C5 [Bos grunniens mutus]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|82621583|gb|ABB86463.1| anthox8a-ANTP class homeobox protein, partial [Nematostella
vectensis]
gi|83728469|gb|ABC41924.1| anthox8b-ANTP class homeobox protein [Nematostella vectensis]
gi|110338991|gb|ABG67759.1| HOXDa, partial [Nematostella vectensis]
gi|110338993|gb|ABG67760.1| HOXDb, partial [Nematostella vectensis]
Length = 60
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT++TNKQL ELEKEFHFNKYL +RR EI+ LQL E Q
Sbjct: 5 RTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQV 45
>gi|20339625|gb|AAM19466.1|AF410908_1 HoxE2 homeobox [Petromyzon marinus]
Length = 60
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT + N QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 5 RTAYANTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 45
>gi|71896405|ref|NP_001025517.1| homeobox protein Hox-A4 [Gallus gallus]
gi|363730020|ref|XP_003640746.1| PREDICTED: homeobox protein Hox-A4-like [Gallus gallus]
gi|123228|sp|P17277.1|HXA4_CHICK RecName: Full=Homeobox protein Hox-A4; AltName: Full=Homeobox
protein Hox-1.4; Short=Chox-1.4
gi|63219|emb|CAA36896.1| unnamed protein product [Gallus gallus]
Length = 309
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 213 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 253
>gi|18026210|gb|AAL25806.1| HOX3 homeodomain protein [Euprymna scolopes]
Length = 100
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q
Sbjct: 23 ARTAYTSAQLVELEKEFHFNQYLCRPRRIEMAALLNLSERQI 64
>gi|86515396|ref|NP_001034523.1| cephalothorax [Tribolium castaneum]
gi|13241681|gb|AAK16422.1|AF321227_2 Scr [Tribolium castaneum]
gi|270002805|gb|EEZ99252.1| sex combs reduced [Tribolium castaneum]
Length = 312
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 211 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 263
>gi|395540855|ref|XP_003772366.1| PREDICTED: homeobox protein Hox-C5 [Sarcophilus harrisii]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|351706133|gb|EHB09052.1| Homeobox protein Hox-C5 [Heterocephalus glaber]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|359323907|ref|XP_003640225.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D4 [Canis
lupus familiaris]
Length = 249
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 189
>gi|348581049|ref|XP_003476290.1| PREDICTED: homeobox protein Hox-C5-like [Cavia porcellus]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|301776116|ref|XP_002923476.1| PREDICTED: homeobox protein Hox-C5-like [Ailuropoda melanoleuca]
gi|281342178|gb|EFB17762.1| hypothetical protein PANDA_012615 [Ailuropoda melanoleuca]
Length = 222
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|431921604|gb|ELK18956.1| Homeobox protein Hox-C5 [Pteropus alecto]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|28629623|gb|AAO43017.1| HoxA2 [Latimeria menadoensis]
Length = 245
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 30/36 (83%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQL 115
RT +TN QL ELEKEFHFNKYL R RR+EIA++L L
Sbjct: 16 RTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDL 51
>gi|332692513|gb|AEE90190.1| Homeobox C5a [Anguilla anguilla]
gi|385654506|gb|AFI62003.1| Hox-C5a [Anguilla japonica]
Length = 250
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 175 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANSLCLNERQ 214
>gi|301128903|emb|CBL59365.1| HoxD3 [Scyliorhinus canicula]
Length = 394
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 163 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 202
>gi|7229537|gb|AAF42868.1|AF227628_1 sex combs reduced Scr [Tribolium castaneum]
gi|54607266|gb|AAL26542.2| cephalothorax [Tribolium castaneum]
gi|54607268|gb|AAL27023.2| cephalothorax [Tribolium castaneum]
Length = 312
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 211 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 263
>gi|3005952|emb|CAA76296.1| homeodomain protein [Lineus sanguineus]
Length = 106
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RRIE+A++L L+E Q
Sbjct: 10 SRTAYTSAQLVELEKEFHFNRYLCRPRRIEMAALLNLSERQ 50
>gi|431822413|ref|NP_001012293.1| homeobox protein Hox-D4 [Gallus gallus]
Length = 237
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 189
>gi|157786818|ref|NP_001099355.1| homeo box D4 [Rattus norvegicus]
gi|149022292|gb|EDL79186.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
gi|149022293|gb|EDL79187.1| homeo box D4 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 195
>gi|1039391|gb|AAA79876.1| homeobox protein [Mus musculus]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|319429386|gb|ADV56968.1| homeodomain protein HoxD3a [Culter alburnus]
Length = 301
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 166 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQ 205
>gi|395835049|ref|XP_003790497.1| PREDICTED: homeobox protein Hox-C5 [Otolemur garnettii]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|193952|gb|AAA20072.1| homeobox protein [Mus musculus]
Length = 248
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 154 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 193
>gi|359754107|gb|AEV59528.1| HOXC5 [Macropus eugenii]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|444723480|gb|ELW64135.1| Homeobox protein Hox-D4 [Tupaia chinensis]
Length = 252
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 154 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 193
>gi|395837223|ref|XP_003791540.1| PREDICTED: homeobox protein Hox-D4 [Otolemur garnettii]
Length = 260
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 159 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 198
>gi|1791005|gb|AAB41222.1| homeodomain-containing transcription factor [Mus musculus]
gi|148695229|gb|EDL27176.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|148695230|gb|EDL27177.1| homeobox D4, isoform CRA_a [Mus musculus]
gi|223460739|gb|AAI39208.1| Hoxd4 protein [Mus musculus]
gi|223461092|gb|AAI39207.1| Hoxd4 protein [Mus musculus]
Length = 250
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 195
>gi|344246570|gb|EGW02674.1| Homeobox protein Hox-D10 [Cricetulus griseus]
Length = 371
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 229 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 268
>gi|146324938|sp|A1YFD8.1|HXD4_SAGLB RecName: Full=Homeobox protein Hox-D4
gi|121221996|gb|ABM47600.1| HOXD4 [Saguinus labiatus]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|11321638|ref|NP_061826.1| homeobox protein Hox-C5 [Homo sapiens]
gi|397521949|ref|XP_003831045.1| PREDICTED: homeobox protein Hox-C5 [Pan paniscus]
gi|232262|sp|Q00444.1|HXC5_HUMAN RecName: Full=Homeobox protein Hox-C5; AltName: Full=Homeobox
protein CP11; AltName: Full=Homeobox protein Hox-3D
gi|32388|emb|CAA43894.1| homeoprotein HOX3D [Homo sapiens]
gi|119617154|gb|EAW96748.1| homeobox C5 [Homo sapiens]
gi|146327466|gb|AAI41644.1| Homeobox C5 [synthetic construct]
gi|147897703|gb|AAI40273.1| Homeobox C5 [synthetic construct]
gi|208966502|dbj|BAG73265.1| homeobox C5 [synthetic construct]
gi|410256620|gb|JAA16277.1| homeobox C5 [Pan troglodytes]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|56549003|gb|AAV97665.1| Hox protein [Oreochromis niloticus]
Length = 101
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 81 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
T F+ +QLTELEKEFHF+KYLTR R+EIA+ L+L TQ
Sbjct: 1 TKFSTRQLTELEKEFHFSKYLTRGPRVEIAATLELKGTQ 39
>gi|426372800|ref|XP_004053304.1| PREDICTED: homeobox protein Hox-C5 [Gorilla gorilla gorilla]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|125858467|ref|NP_001075038.1| homeobox protein Hox-D4 [Pan troglodytes]
gi|397489129|ref|XP_003815587.1| PREDICTED: homeobox protein Hox-D4 [Pan paniscus]
gi|146324936|sp|A1YFY3.1|HXD4_PANPA RecName: Full=Homeobox protein Hox-D4
gi|146324937|sp|A2T6X6.1|HXD4_PANTR RecName: Full=Homeobox protein Hox-D4
gi|121483828|gb|ABM54208.1| HOXD4 [Pan paniscus]
gi|124111109|gb|ABM91931.1| HOXD4 [Pan troglodytes]
gi|410218854|gb|JAA06646.1| homeobox D4 [Pan troglodytes]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|281349542|gb|EFB25126.1| hypothetical protein PANDA_000660 [Ailuropoda melanoleuca]
Length = 130
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 12 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 69
>gi|426355746|ref|XP_004045269.1| PREDICTED: homeobox protein Hox-A4 [Gorilla gorilla gorilla]
Length = 187
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 69 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 126
>gi|395519807|ref|XP_003764033.1| PREDICTED: homeobox protein Hox-D4 [Sarcophilus harrisii]
Length = 238
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 190
>gi|426337801|ref|XP_004032885.1| PREDICTED: homeobox protein Hox-D4 [Gorilla gorilla gorilla]
gi|146324934|sp|A1YER7.1|HXD4_GORGO RecName: Full=Homeobox protein Hox-D4
gi|120974087|gb|ABM46635.1| HOXD4 [Gorilla gorilla]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|359754118|gb|AEV59538.1| HOXD4 [Macropus eugenii]
Length = 238
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 190
>gi|32367|emb|CAA28411.1| unnamed protein product [Homo sapiens]
gi|225392|prf||1301323A gene homeobox
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|5002500|dbj|BAA78621.1| AmphiHox2 [Branchiostoma floridae]
Length = 205
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT FTN QL ELEKEFH+NKY+ + RR EIAS L LNE Q
Sbjct: 110 RTVFTNTQLLELEKEFHYNKYVCKPRRKEIASYLDLNERQV 150
>gi|313234711|emb|CBY10664.1| unnamed protein product [Oikopleura dioica]
Length = 154
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T Q ELEKEFHFN+YLTR RRIEIA+ LQL+E Q
Sbjct: 90 RTAYTRHQTLELEKEFHFNRYLTRKRRIEIATTLQLSERQV 130
>gi|332209405|ref|XP_003253802.1| PREDICTED: homeobox protein Hox-D4 [Nomascus leucogenys]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|15825440|gb|AAL09697.1| cephalothorax [Tribolium castaneum]
Length = 268
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 167 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 219
>gi|291461542|dbj|BAI83405.1| antennapedia 2 [Parasteatoda tepidariorum]
Length = 327
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 30/42 (71%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
GR +T Q ELEKEFHFN+YLTR RRIEIA L L E QT
Sbjct: 241 GRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQT 282
>gi|224045300|ref|XP_002194850.1| PREDICTED: homeobox protein Hox-A4 [Taeniopygia guttata]
Length = 306
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 211 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 251
>gi|220898206|gb|ACL81460.1| HoxC5 [Latimeria menadoensis]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|296652|emb|CAA35237.1| hox 5.1 protein [Homo sapiens]
gi|189067017|dbj|BAG36610.1| unnamed protein product [Homo sapiens]
gi|208968521|dbj|BAG74099.1| homeobox D4 [synthetic construct]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|403258699|ref|XP_003921888.1| PREDICTED: homeobox protein Hox-D4 [Saimiri boliviensis
boliviensis]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|327263836|ref|XP_003216723.1| PREDICTED: homeobox protein Hox-C5-like [Anolis carolinensis]
Length = 234
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 171 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 210
>gi|301614396|ref|XP_002936695.1| PREDICTED: homeobox protein Hox-C5-like [Xenopus (Silurana)
tropicalis]
Length = 224
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 161 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 200
>gi|431909013|gb|ELK12604.1| Homeobox protein Hox-A4 [Pteropus alecto]
Length = 125
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 5 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 62
>gi|23397672|ref|NP_055436.2| homeobox protein Hox-D4 [Homo sapiens]
gi|20141491|sp|P09016.3|HXD4_HUMAN RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein HHO.C13; AltName: Full=Homeobox protein Hox-4B;
AltName: Full=Homeobox protein Hox-5.1
gi|16876979|gb|AAH16763.1| Homeobox D4 [Homo sapiens]
gi|49904755|gb|AAH74797.1| Homeobox D4 [Homo sapiens]
gi|119631491|gb|EAX11086.1| homeobox D4 [Homo sapiens]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|242011836|ref|XP_002426650.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212510814|gb|EEB13912.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 356
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 254 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 306
>gi|325260875|gb|ADZ04665.1| homeobox C5 [Notophthalmus viridescens]
Length = 223
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 160 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 199
>gi|354490175|ref|XP_003507235.1| PREDICTED: homeobox protein Hox-C5-like [Cricetulus griseus]
gi|344239244|gb|EGV95347.1| Homeobox protein Hox-C5 [Cricetulus griseus]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 159 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 198
>gi|253828367|gb|ACT36589.1| Anthox8b, partial [Nematostella vectensis]
Length = 157
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT++TNKQL ELEKEFHFNKYL +RR EI+ LQL E Q
Sbjct: 67 RTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQV 107
>gi|384940632|gb|AFI33921.1| homeobox protein Hox-D4 [Macaca mulatta]
gi|387540532|gb|AFJ70893.1| homeobox protein Hox-D4 [Macaca mulatta]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|431894935|gb|ELK04728.1| Homeobox protein Hox-D4 [Pteropus alecto]
Length = 253
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 195
>gi|156387516|ref|XP_001634249.1| predicted protein [Nematostella vectensis]
gi|156221330|gb|EDO42186.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT++TNKQL ELEKEFHFNKYL +RR EI+ LQL E Q
Sbjct: 95 RTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQV 135
>gi|148228967|ref|NP_001079291.1| homeobox protein Hox-C5 [Xenopus laevis]
gi|115527869|gb|AAI24881.1| Hoxc5-A protein [Xenopus laevis]
Length = 226
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 163 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 202
>gi|402888721|ref|XP_003907700.1| PREDICTED: homeobox protein Hox-D4 [Papio anubis]
Length = 255
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197
>gi|224055148|ref|XP_002199292.1| PREDICTED: homeobox protein Hox-D4 [Taeniopygia guttata]
Length = 237
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 189
>gi|18858849|ref|NP_571219.1| homeobox protein Hox-C5a [Danio rerio]
gi|1708356|sp|P09074.2|HXC5A_DANRE RecName: Full=Homeobox protein Hox-C5a; Short=Hox-C5; AltName:
Full=Homeobox protein Hox-3.4; AltName: Full=Homeobox
protein Zf-25
gi|414105|emb|CAA48399.1| homeobox-3.4 protein [Danio rerio]
Length = 232
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 169 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 208
>gi|260835443|ref|XP_002612718.1| hypothetical protein BRAFLDRAFT_241843 [Branchiostoma floridae]
gi|229298097|gb|EEN68727.1| hypothetical protein BRAFLDRAFT_241843 [Branchiostoma floridae]
Length = 100
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT FTN QL ELEKEFH+NKY+ + RR EIAS L LNE Q
Sbjct: 5 RTVFTNTQLLELEKEFHYNKYVCKPRRKEIASYLDLNERQV 45
>gi|37528843|gb|AAQ92347.1| transcription factor HoxB3 [Pleurodeles waltl]
Length = 404
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 81 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
T +T+ QL ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 171 TAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLSLSERQ 209
>gi|930069|emb|CAA34298.1| HOX-2.8 protein (77 AA) [Homo sapiens]
Length = 77
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 81 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
T +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 17 TAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 56
>gi|449266119|gb|EMC77229.1| Homeobox protein Hox-C5, partial [Columba livia]
Length = 221
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 158 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 197
>gi|383849762|ref|XP_003700506.1| PREDICTED: homeobox protein abdominal-A homolog [Megachile
rotundata]
Length = 293
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 28 ITKVQIPSELSPLGVHPHPTSPS---TDYTTPLTALKYPPSAALSQHQSLLNNSGRTNFT 84
+T Q P+ P G+ P P TD+ +P + P+ GR +T
Sbjct: 124 LTSCQQPTTGQP-GISDIPRYPWMSITDWMSPFDRVVCGPNGCP-------RRRGRQTYT 175
Query: 85 NKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
Q ELEKEFHFN YLTR RRIEIA L L E Q
Sbjct: 176 RFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQ 210
>gi|327280470|ref|XP_003224975.1| PREDICTED: homeobox protein Hox-A4-like [Anolis carolinensis]
Length = 326
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 228 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHSLCLSERQV 268
>gi|520610|emb|CAA84515.1| Hox-2 homeodomain protein [Branchiostoma floridae]
gi|745775|prf||2016458B Hox-2 gene
Length = 114
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT FTN QL ELEKEFH+NKY+ + RR EIAS L LNE Q
Sbjct: 19 RTVFTNTQLLELEKEFHYNKYVCKPRRKEIASYLDLNERQV 59
>gi|8132099|gb|AAF73216.1| hox-3 [Parasteatoda tepidariorum]
Length = 52
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T+ QL ELEKEFHFN+YL R RRIE+AS+L L E Q
Sbjct: 3 ARTAYTSAQLVELEKEFHFNRYLCRPRRIEMASLLNLTERQI 44
>gi|357623860|gb|EHJ74850.1| sex combs reduced-like protein [Danaus plexippus]
Length = 336
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 235 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 287
>gi|397472982|ref|XP_003808006.1| PREDICTED: homeobox protein Hox-A4 [Pan paniscus]
Length = 175
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 8/58 (13%)
Query: 71 HQSLLN---NSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
H S +N N G RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 57 HVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 114
>gi|224460203|gb|ACN43631.1| sex combs reduced [Rhodnius prolixus]
Length = 338
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 72 QSLLNNSG-----RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
QS +N +G RT++T Q ELEKEFHFN+YLTR RRIEIA L L E Q
Sbjct: 241 QSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQ 293
>gi|149639536|ref|XP_001516048.1| PREDICTED: homeobox protein Hox-D4-like [Ornithorhynchus anatinus]
Length = 239
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 152 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 191
>gi|187608357|ref|NP_001119917.1| homeobox protein Hox-D4a [Danio rerio]
gi|190337184|gb|AAI62966.1| Homeo box D4a [Danio rerio]
gi|190338908|gb|AAI62983.1| Homeo box D4a [Danio rerio]
gi|190339776|gb|AAI63059.1| Hoxd4a protein [Danio rerio]
Length = 256
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 170 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 209
>gi|61966487|emb|CAI45575.1| homeodomain protein Antp [Pecten maximus]
Length = 60
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
GR +T Q ELEKEFHFNKYLTR RR+EIA VL L E Q
Sbjct: 4 GRRTYTRYQTLELEKEFHFNKYLTRRRRVEIAHVLCLTERQ 44
>gi|190337699|gb|AAI63205.1| Hoxc5a protein [Danio rerio]
Length = 233
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA+ L LNE Q
Sbjct: 170 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQ 209
>gi|449266232|gb|EMC77311.1| Homeobox protein Hox-D4 [Columba livia]
Length = 237
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 150 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 189
>gi|404058|gb|AAA37855.1| includes homeodomain, partial [Mus musculus]
Length = 101
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T+ QL ELEKEFHFN+YL R RR+E+A++L L E Q
Sbjct: 17 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQI 57
>gi|37777299|dbj|BAC99311.1| Hox 2 [Bombyx mori]
Length = 55
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 81 TNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
T +TN QL ELEKEFHFNKYL R RR+EIA++L L E Q
Sbjct: 1 TAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQV 40
>gi|123298|sp|P17278.1|HXD4_CHICK RecName: Full=Homeobox protein Hox-D4; AltName: Full=Homeobox
protein Hox-A; Short=Chox-A
Length = 235
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 148 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 187
>gi|51374|emb|CAA31889.1| Hox-1.4 protein (147 AA) [Mus musculus]
Length = 147
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 79 GRTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 4 SRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQV 45
>gi|1334709|emb|CAA36898.1| unnamed protein product [Gallus gallus]
Length = 225
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 138 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 177
>gi|396948827|gb|AFN89813.1| deformed, partial [Rhodnius prolixus]
Length = 192
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T Q+ ELEKEFHFNKYLTR RRIEIA L L+E Q
Sbjct: 11 RTAYTRHQILELEKEFHFNKYLTRRRRIEIAHTLCLSERQ 50
>gi|327283057|ref|XP_003226258.1| PREDICTED: homeobox protein Hox-D4-like [Anolis carolinensis]
Length = 244
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 156 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 195
>gi|217035823|gb|ACJ74381.1| Hox2 [Branchiostoma lanceolatum]
Length = 204
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT FTN QL ELEKEFH+NKY+ + RR EIAS L LNE Q
Sbjct: 109 RTVFTNTQLLELEKEFHYNKYVCKPRRKEIASFLDLNERQV 149
>gi|4204923|gb|AAD10852.1| hox homeobox transcription factor HOXB3 [Homo sapiens]
Length = 431
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T+ + ELEKEFHFN+YL R RR+E+A++L L+E Q
Sbjct: 192 RTAYTSAHVVELEKEFHFNRYLCRPRRVEMANLLNLSERQ 231
>gi|410968902|ref|XP_003990938.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Hox-D4 [Felis
catus]
Length = 250
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 151 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 190
>gi|432865302|ref|XP_004070516.1| PREDICTED: homeobox protein HOX3-like [Oryzias latipes]
gi|74267557|dbj|BAE44277.1| hoxC3a [Oryzias latipes]
gi|83016962|dbj|BAE53485.1| hoxC3a [Oryzias latipes]
Length = 233
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQT 120
RT FTN QL ELEKEFHF+ YL R RR+E+A+ LQL + Q
Sbjct: 100 RTAFTNSQLLELEKEFHFSPYLCRRRRLEMAAGLQLTDQQV 140
>gi|213513736|ref|NP_001135093.1| homeobox protein HoxC5ba [Salmo salar]
gi|157815982|gb|ABV82010.1| homeobox protein HoxC5ba [Salmo salar]
gi|158702349|gb|ABW77538.1| homeobox protein HoxC5ba [Salmo salar]
Length = 249
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT++T Q ELEKEFHFN+YLTR RRIEIA L LNE Q
Sbjct: 186 RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLNERQ 225
>gi|311272691|ref|XP_003133546.1| PREDICTED: homeobox protein Hox-D4-like [Sus scrofa]
Length = 257
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T +Q+ ELEKEFHFN+YLTR RRIEIA L L+E Q
Sbjct: 159 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 198
>gi|255742463|gb|ACU32576.1| homeobox protein HoxC5 [Callorhinchus milii]
Length = 231
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 80 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASVLQLNETQ 119
RT +T Q ELEKEFHFN+YLTR RR+EIAS L LNE Q
Sbjct: 168 RTCYTRYQTLELEKEFHFNRYLTRRRRLEIASNLCLNERQ 207
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.123 0.331
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,948,666,962
Number of Sequences: 23463169
Number of extensions: 86219325
Number of successful extensions: 2973864
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16995
Number of HSP's successfully gapped in prelim test: 1495
Number of HSP's that attempted gapping in prelim test: 2592235
Number of HSP's gapped (non-prelim): 250634
length of query: 123
length of database: 8,064,228,071
effective HSP length: 89
effective length of query: 34
effective length of database: 5,976,006,030
effective search space: 203184205020
effective search space used: 203184205020
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)