Query psy14578
Match_columns 270
No_of_seqs 116 out of 197
Neff 4.8
Searched_HMMs 13730
Date Fri Aug 16 23:24:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14578.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14578hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v8ha1 b.1.18.19 (A:2-107) Su 15.5 90 0.0065 22.3 4.5 29 72-101 70-98 (106)
2 d2vy4a1 g.37.1.7 (A:53-87) U11 14.5 7 0.00051 23.6 -1.8 8 158-165 24-31 (35)
3 d2q3za1 b.1.18.9 (A:15-145) Tr 12.5 1.5E+02 0.011 21.6 5.2 53 83-135 21-80 (131)
4 d2q3za2 b.1.5.1 (A:472-585) Tr 11.3 2.2E+02 0.016 19.9 5.6 25 82-106 13-37 (114)
5 d1v0aa1 b.18.1.30 (A:4-170) En 10.1 3E+02 0.022 19.9 6.7 23 122-144 103-125 (167)
6 d1vjja3 b.1.5.1 (A:594-692) Tr 9.6 2.7E+02 0.02 19.1 6.2 51 39-106 28-80 (99)
7 d1zpsa1 b.168.1.1 (A:8-131) Ph 8.1 1.1E+02 0.008 22.9 2.8 46 14-61 51-102 (124)
8 d1g0da2 b.1.5.1 (A:472-583) Tr 8.1 3.2E+02 0.023 18.9 5.4 25 83-107 13-37 (112)
9 d2j01s1 c.55.4.1 (S:23-108) Ri 7.8 88 0.0064 21.7 1.9 25 89-113 13-37 (86)
10 d2gycm1 c.55.4.1 (M:3-115) Rib 7.5 1.4E+02 0.01 21.6 3.0 24 90-113 34-57 (113)
No 1
>d1v8ha1 b.1.18.19 (A:2-107) Sulfur oxidation protein SoxZ {Thermus thermophilus [TaxId: 274]}
Probab=15.46 E-value=90 Score=22.31 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=23.3
Q ss_pred eccEEEEEEeeCCCceEEEEEEEeCCCCEE
Q psy14578 72 KLPYLCLIIKNLNKHFSFEVQIIDSKNTKR 101 (270)
Q Consensus 72 ~~pfLvLqvk~l~k~FsfEI~I~D~~~~rR 101 (270)
.-|||.+.+++-+.- .++|..+|+++..-
T Consensus 70 ~NP~~~F~~~~~~~g-~l~v~~~Dn~G~~~ 98 (106)
T d1v8ha1 70 ANPLYAFKFKAEKAG-TFTIKLKDTDGDTG 98 (106)
T ss_dssp SSCEEEEEEECCSCE-EEEEEEEETTSCEE
T ss_pred CCCeEEEEEccCCCc-eEEEEEEECCCCEE
Confidence 469999999776544 79999999999843
No 2
>d2vy4a1 g.37.1.7 (A:53-87) U11/U12 small nuclear ribonucleoprotein 48 kDa protein, U11-48K {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.46 E-value=7 Score=23.58 Aligned_cols=8 Identities=63% Similarity=1.389 Sum_probs=5.4
Q ss_pred eeeeeeee
Q psy14578 158 ANCRLRRI 165 (270)
Q Consensus 158 ANCRLRRI 165 (270)
|+|||||+
T Consensus 24 asCrLRkl 31 (35)
T d2vy4a1 24 ASCRLRKM 31 (35)
T ss_dssp HHHHHHHC
T ss_pred HHhhHhhc
Confidence 56777765
No 3
>d2q3za1 b.1.18.9 (A:15-145) Transglutaminase N-terminal domain {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=12.53 E-value=1.5e+02 Score=21.62 Aligned_cols=53 Identities=11% Similarity=0.147 Sum_probs=39.7
Q ss_pred CCCceEEEEEEE----eCCCCEEEEEEeeeeeeeeecccEEEecccC---CCCeeEEEEc
Q psy14578 83 LNKHFSFEVQII----DSKNTKRRIRFSNYHSCSKINPFIVTFPICL---NEGWNEVRID 135 (270)
Q Consensus 83 l~k~FsfEI~I~----D~~~~rRR~~~Sn~~ke~k~~p~~~~iPL~l---~~~W~~L~iD 135 (270)
=|+.|++.|..- +.+.-+-+|.+++--+-...+.+.+.+|+.- .+.|.--...
T Consensus 21 RGQ~F~i~l~f~~r~~~~~~d~l~l~~~~G~~P~~~~gT~~~~~~~~~~~~~~W~a~v~~ 80 (131)
T d2q3za1 21 RGQPFWLTLHFEGRNYQASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVD 80 (131)
T ss_dssp TTSCEEEEEEESSSCCCTTTEEEEEEEEESSSCCTTTTSEEEEEBCSCCCTTSCEEEEEE
T ss_pred CCCcEEEEEEecCcCCCCcccEEEEEEEeCCCCCccCCCEEEEeeccCCCCCCceEEEEe
Confidence 378888888763 6666678888888887777788889999874 3678765443
No 4
>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=11.30 E-value=2.2e+02 Score=19.91 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=21.0
Q ss_pred eCCCceEEEEEEEeCCCCEEEEEEe
Q psy14578 82 NLNKHFSFEVQIIDSKNTKRRIRFS 106 (270)
Q Consensus 82 ~l~k~FsfEI~I~D~~~~rRR~~~S 106 (270)
++|++|.+-|.+.-.++..|.+++.
T Consensus 13 ~iG~Df~v~~~~~N~s~~~~~v~l~ 37 (114)
T d2q3za2 13 NMGSDFDVFAHITNNTAEEYVCRLL 37 (114)
T ss_dssp BTTCCEEEEEEEEECSSSCEEEEEE
T ss_pred cCCCCEEEEEEEEeCCCCCEEEEEE
Confidence 5699999999999988888877665
No 5
>d1v0aa1 b.18.1.30 (A:4-170) Endoglucanase H {Clostridium thermocellum [TaxId: 1515]}
Probab=10.13 E-value=3e+02 Score=19.86 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=17.8
Q ss_pred cccCCCCeeEEEEcHHHHHHHHh
Q psy14578 122 PICLNEGWNEVRIDLQDFVYKSY 144 (270)
Q Consensus 122 PL~l~~~W~~L~iDL~~lt~~~f 144 (270)
.+...++|+.+.|+..+|....+
T Consensus 103 ~f~~~~~W~~V~IPF~~F~~~~~ 125 (167)
T d1v0aa1 103 SITPDSSWKTIEIPFSSFRRRLD 125 (167)
T ss_dssp EECCCSSCEEEEEEGGGCEECCS
T ss_pred EEecCCccEEEEEEHHHcccccc
Confidence 34556889999999999886544
No 6
>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
Probab=9.57 E-value=2.7e+02 Score=19.07 Aligned_cols=51 Identities=14% Similarity=0.204 Sum_probs=30.2
Q ss_pred ccCCcceEEEEeeCCccceeEEccCCCCcccceeccEEEEEEee--CCCceEEEEEEEeCCCCEEEEEEe
Q psy14578 39 DYDLNSLALEIISTTVMNTYITCPNYRFKSLGIKLPYLCLIIKN--LNKHFSFEVQIIDSKNTKRRIRFS 106 (270)
Q Consensus 39 DkdIks~VleI~G~~~~ttyI~~P~d~k~sLGL~~pfLvLqvk~--l~k~FsfEI~I~D~~~~rRR~~~S 106 (270)
+..++.-+|.|+|+ ||..+-..+.+.. -+...++.+.++=..-=.|+|.++
T Consensus 28 ~~~L~~c~f~vEG~-----------------GL~~~~~~~~~~~v~p~~~~~~~~~~~P~~~G~~~l~a~ 80 (99)
T d1vjja3 28 DEPVRDCVLMVEGS-----------------GLLLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLLAD 80 (99)
T ss_dssp SSCBCSEEEEEECT-----------------TTSSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEEEEE
T ss_pred CCchhCEEEEEEeC-----------------CCCCccEEEecCccCCCCEEEEEEEEEcCCcccEEEEEE
Confidence 66788889999997 4444333333322 245566666666666555665543
No 7
>d1zpsa1 b.168.1.1 (A:8-131) Phosphoribosyl-AMP cyclohydrolase HisI {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=8.13 E-value=1.1e+02 Score=22.85 Aligned_cols=46 Identities=24% Similarity=0.426 Sum_probs=28.4
Q ss_pred EeccCCCccccccccccCCcEEEEe------ccCCcceEEEEeeCCccceeEEc
Q psy14578 14 FYSIGSKPLSLWDTDVHNGYIRRIT------DYDLNSLALEIISTTVMNTYITC 61 (270)
Q Consensus 14 f~S~Gs~PL~~Wk~~~k~G~Vkrv~------DkdIks~VleI~G~~~~ttyI~~ 61 (270)
|+|-.+ -++|.|-...|++.+|. |.|.--..++-.|..+++.+-+|
T Consensus 51 y~SRSR--~~lW~KGetSG~~q~v~~i~~DCD~D~ll~~V~q~G~aCHtG~~SC 102 (124)
T d1zpsa1 51 YWSTSR--GKLWLKGESSGHVQRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSC 102 (124)
T ss_dssp EEETTT--TEEEETTTTTSCCEEEEEEEECTTSSEEEEEEEESSCSSTTSBSSS
T ss_pred EEEhhh--hhhhhhhhhcCCeeEEEEEEcCCCCCEEEEEEecccceeecCCCCC
Confidence 444443 36999977789888876 34444455555676666655444
No 8
>d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Probab=8.08 E-value=3.2e+02 Score=18.88 Aligned_cols=25 Identities=8% Similarity=0.240 Sum_probs=20.8
Q ss_pred CCCceEEEEEEEeCCCCEEEEEEee
Q psy14578 83 LNKHFSFEVQIIDSKNTKRRIRFSN 107 (270)
Q Consensus 83 l~k~FsfEI~I~D~~~~rRR~~~Sn 107 (270)
+|++|.+-|.+.-.++..|.+++.-
T Consensus 13 ~G~Df~v~i~~~N~s~~~~~v~l~l 37 (112)
T d1g0da2 13 FGTDFDVIVEVKNEGGRDAHAQLTM 37 (112)
T ss_dssp TTCCEEEEEEEEECSSSCEEEEEEE
T ss_pred cCCCEEEEEEEEECCCCCEEEEEEE
Confidence 3999999999999888888777653
No 9
>d2j01s1 c.55.4.1 (S:23-108) Ribosomal protein L18 (L18p) {Thermus thermophilus [TaxId: 274]}
Probab=7.76 E-value=88 Score=21.68 Aligned_cols=25 Identities=24% Similarity=0.138 Sum_probs=20.5
Q ss_pred EEEEEEeCCCCEEEEEEeeeeeeee
Q psy14578 89 FEVQIIDSKNTKRRIRFSNYHSCSK 113 (270)
Q Consensus 89 fEI~I~D~~~~rRR~~~Sn~~ke~k 113 (270)
|.++|+|+.+.+.-.+.||..+..+
T Consensus 13 iyaQiIDd~~~~tl~s~St~~k~~k 37 (86)
T d2j01s1 13 IYAQIIDDEKGVTLVSASSLALKLK 37 (86)
T ss_dssp BCEEEEETTTTEEEEEECSTTTCCC
T ss_pred EEEEEEEcCCCeEEEEEeccchhhc
Confidence 3467789999999999999888765
No 10
>d2gycm1 c.55.4.1 (M:3-115) Ribosomal protein L18 (L18p) {Escherichia coli [TaxId: 562]}
Probab=7.47 E-value=1.4e+02 Score=21.57 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=20.1
Q ss_pred EEEEEeCCCCEEEEEEeeeeeeee
Q psy14578 90 EVQIIDSKNTKRRIRFSNYHSCSK 113 (270)
Q Consensus 90 EI~I~D~~~~rRR~~~Sn~~ke~k 113 (270)
..+|+|+.+.+.-.+.||..++.+
T Consensus 34 yaQiIdd~~~~tl~saST~~k~~~ 57 (113)
T d2gycm1 34 YAQVIAPNGSEVLVAASTVEKAIA 57 (113)
T ss_dssp EEEEEETTTTEEEEEEETTGGGGT
T ss_pred EEEEEEccCCcEEEEeeehhhhhh
Confidence 456689999999999999988765
Done!